RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000153317

Ensembl transcript IDs: ENST00000357668.2, ENST00000518721.6, ENST00000518957.1, ENST00000520625.1, ENST00000520927.5, ENST00000521075.5, ENST00000521426.5, ENST00000524018.1, ENST00000524124.5, ENST00000524299.1, ENST00000524367.5

Found 925 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAAGGAACTGCGCCTTTGTTTGGGGGCCCATGAGGTAGTGGGCTaGGAGGGTCGGATAGGGTTCTCTTGTGTCCGGGTGGTGGGGGAG +
Preference number: 1 (lower is better)
Translates to: PKELRLCLGAHEVVG*EGRIGFSCVRVVGE
Trigger: CTCCCCCACCACCCGGACACAAGAGAACCCTATCCGACCCTCCCAGCCCACTACCTCATGGGCCCCCAAACAAAGGCGCAGTTCCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 90 bp GGAGGAGGCCTCTTCTTGGATAGGGTGGAGCTGCCACTAGAGGTCTaGGTGCTTAGAGGGAGTGTTGAAGGTGGGCCAGTTGGACCTTTC +
Preference number: 1 (lower is better)
Translates to: GGGLFLDRVELPLEV*VLRGSVEGGPVGPF
Trigger: GAAAGGTCCAACTGGCCCACCTTCAACACTCCCTCTAAGCACCCAGACCTCTAGTGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 90 bp ACCGGGACACTGAGCAACCTCAGATGCAGACTTCCATCCGGACACTaGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAAC +
Preference number: 1 (lower is better)
Translates to: TGTLSNLRCRLPSGH*CGFSTEAAKAASHN
Trigger: GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGCTCAGTGTCCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR GCA 90 bp GTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCTTaGTTTTGGATGGCGTCTCTGGACTGCACATTTGGGGATAGATCC +
Preference number: 1 (lower is better)
Translates to: VSGRVGVRSLESSDA*FWMASLDCTFGDRS
Trigger: GGATCTATCCCCAAATGTGCAGTCCAGAGACGCCATCCAAAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 90 bp GGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCTTGCTTTTaGATGGCGTCTCTGGACTGCACATTTGGGGATAGATCCAATGGG +
Preference number: 1 (lower is better)
Translates to: GRVGVRSLESSDACF*MASLDCTFGDRSNG
Trigger: CCCATTGGATCTATCCCCAAATGTGCAGTCCAGAGACGCCATCCAAAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR TCA 90 bp GATAGATCCAATGGGTGTGACTTCAGTGTGACCTCAGAGGGTTGCTaGGCCTTGGGTGAGACATCTCCAGTCTGGGATTTTGCTAGCAGG +
Preference number: 1 (lower is better)
Translates to: DRSNGCDFSVTSEGC*ALGETSPVWDFASR
Trigger: CCTGCTAGCAAAATCCCAGACTGGAGATGTCTCACCCAAGGCTCAGCAACCCTCTGAGGTCACACTGAAGTCACACCCATTGGATCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR TCA 90 bp TGGACTGCACATTTGGGGATAGATCCAATGGGTGTGACTTCAGTGTaGCCTCAGAGGGTTGCTGAGCCTTGGGTGAGACATCTCCAGTCT +
Preference number: 1 (lower is better)
Translates to: WTAHLGIDPMGVTSV*PQRVAEPWVRHLQS
Trigger: AGACTGGAGATGTCTCACCCAAGGCTCAGCAACCCTCTGAGGTCACACTGAAGTCACACCCATTGGATCTATCCCCAAATGTGCAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 90 bp GTACCGAGGCTGCTAAAGCTGCCAGTCACAACCCAGCATGTCAACTaGTTCCTCATGCTCTGTTTGGTGTGGAAATTCACATGTGCCCTG +
Preference number: 1 (lower is better)
Translates to: VPRLLKLPVTTQHVN*FLMLCLVWKFTCAL
Trigger: CAGGGCACATGTGAATTTCCACACCAAACAGAGCATGAGGAACCAGTTGACATGCTGGGTTGTGACTGGCAGCTTTAGCAGCCTCGGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR GCA 90 bp ATAATGGCTTTTGTCAGGTCTTCCAGGCTGTTCTCTCCCGCACTCTaGTCTCCACGGAAGGCCATGGTTAGGGCCTCTTCTTTGCTATTT +
Preference number: 1 (lower is better)
Translates to: IMAFVRSSRLFSPAL*SPRKAMVRASSLLF
Trigger: AAATAGCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGAGAGCAGAGTGCGGGAGAGAACAGCCTGGAAGACCTGACAAAAGCCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 90 bp CTTCCAGGCTGTTCTCTCCCGCACTCTGCTCTCCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGCTATTTGTCAATACTGATATCCATG +
Preference number: 1 (lower is better)
Translates to: LPGCSLPHSALHGRP*LGPLLCYLSILISM
Trigger: CATGGATATCAGTATTGACAAATAGCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGAGAGCAGAGTGCGGGAGAGAACAGCCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 90 bp TCTGATGAGCCACAATCGCAGCAAATGTCATTCCCTGGGAGCCGCTaGACATCCTCAATAATGGCTTTTGTCAGGTCTTCCAGGCTGTTC +
Preference number: 1 (lower is better)
Translates to: SDEPQSQQMSFPGSR*TSSIMAFVRSSRLF
Trigger: GAACAGCCTGGAAGACCTGACAAAAGCCATTATTGAGGATGTCCAGCGGCTCCCAGGGAATGACATTTGCTGCGATTGTGGCTCATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 90 bp AGGTTCTGCGTTTTGCTAGTCAGACAGGATATGAACAAAGGACACTaGAAAGACCCCCTTCCTTTCAGGCTGTCCTTCGATGTGGCCAAT +
Preference number: 1 (lower is better)
Translates to: RFCVLLVRQDMNKGH*KDPLPFRLSFDVAN
Trigger: ATTGGCCACATCGAAGGACAGCCTGAAAGGAAGGGGGTCTTTCCAGTGTCCTTTGTTCATATCCTGTCTGACTAGCAAAACGCAGAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR GCA 90 bp CCTTCTTTTCACTGCCATATTCCTTATTGCCCTGGAGCTGATGCATaGTGTATCCTCCTTGCCGGCTCTGAGAATCTTCTTTCTGATCCA +
Preference number: 1 (lower is better)
Translates to: PSFHCHIPYCPGADA*CILLAGSENLLSDP
Trigger: TGGATCAGAAAGAAGATTCTCAGAGCCGGCAAGGAGGATACAGCATGCATCAGCTCCAGGGCAATAAGGAATATGGCAGTGAAAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR GCA 90 bp CCGCACTCTGCTCTCCACGGAAGGCCATGGTTAGGGCCTCTTCTTTaGTATTTGTCAATACTGATATCCATGCTACATAATCCTGCTCAT +
Preference number: 1 (lower is better)
Translates to: PHSALHGRPWLGPLL*YLSILISMLHNPAH
Trigger: ATGAGCAGGATTATGTAGCATGGATATCAGTATTGACAAATAGCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGAGAGCAGAGTGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 90 bp GCAACTCTGCCAACTGTGATGATTTCTGAAAGATTTCGGGCGGGATaGTGGCTTTGTCTAGGGAGAGATGATCTGTTTTCCTTAGTGCCA +
Preference number: 1 (lower is better)
Translates to: ATLPTVMISERFRAG*WLCLGRDDLFSLVP
Trigger: TGGCACTAAGGAAAACAGATCATCTCTCCCTAGACAAAGCCACCATCCCGCCCGAAATCTTTCAGAAATCATCACAGTTGGCAGAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 90 bp GTCACAACCCAGCATGTCAACTGGTTCCTCATGCTCTGTTTGGTGTaGAAATTCACATGTGCCCTGACACTGAGGAAGCAATTGCTTAAA +
Preference number: 1 (lower is better)
Translates to: VTTQHVNWFLMLCLV*KFTCALTLRKQLLK
Trigger: TTTAAGCAATTGCTTCCTCAGTGTCAGGGCACATGTGAATTTCCACACCAAACAGAGCATGAGGAACCAGTTGACATGCTGGGTTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR CCA 90 bp CCCTATGGATGCCAGAACATTCTATACAGGTCAAAATACCCAAGTTaGTTGAAAGCCAGGTGGGTTCTGATGAGCCACAATCGCAGCAAA +
Preference number: 1 (lower is better)
Translates to: PYGCQNILYRSKYPS*LKARWVLMSHNRSK
Trigger: TTTGCTGCGATTGTGGCTCATCAGAACCCACCTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCTGGCATCCATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 90 bp ACTCTGCCAACTGTGATGATTTCTGAAAGATTTCGGGCGGGATGGTaGCTTTGTCTAGGGAGAGATGATCTGTTTTCCTTAGTGCCACTT +
Preference number: 1 (lower is better)
Translates to: TLPTVMISERFRAGW*LCLGRDDLFSLVPL
Trigger: AAGTGGCACTAAGGAAAACAGATCATCTCTCCCTAGACAAAGCCACCATCCCGCCCGAAATCTTTCAGAAATCATCACAGTTGGCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR TCA 90 bp ATATACACACTGTGCCCAGGGTTACATGAAGGCAGCAGTCTTGCATaGAGGATGTGGACAATCTTAAGGTTCTGCGTTTTGCTAGTCAGA +
Preference number: 1 (lower is better)
Translates to: IYTLCPGLHEGSSLA*RMWTILRFCVLLVR
Trigger: TCTGACTAGCAAAACGCAGAACCTTAAGATTGTCCACATCCTTCATGCAAGACTGCTGCCTTCATGTAACCCTGGGCACAGTGTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 90 bp CTCTCATCTATCTCCTCCTGTCGAAGATTCCACTCATATTCTACGTaGACGTGTGGATTGAACTTTCCAGATTTAGCCTGGGAAAGCAGA +
Preference number: 1 (lower is better)
Translates to: LSSISSCRRFHSYST*TCGLNFPDLAWESR
Trigger: TCTGCTTTCCCAGGCTAAATCTGGAAAGTTCAATCCACACGTCCACGTAGAATATGAGTGGAATCTTCGACAGGAGGAGATAGATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR TCA 90 bp TTACTCTGTAACAGCAGCTATATACACACTGTGCCCAGGGTTACATaGAGGCAGCAGTCTTGCATGAAGGATGTGGACAATCTTAAGGTT +
Preference number: 1 (lower is better)
Translates to: LLCNSSYIHTVPRVT*RQQSCMKDVDNLKV
Trigger: AACCTTAAGATTGTCCACATCCTTCATGCAAGACTGCTGCCTTCATGTAACCCTGGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR TCA 90 bp TATTTACAACACACATTATATCCCCCTCCTGAGGTGGCCCTTCCATaGGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCA +
Preference number: 1 (lower is better)
Translates to: YLQHTLYPPPEVALP*VSYSVTAAIYTLCP
Trigger: TGGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCCACCTCAGGAGGGGGATATAATGTGTGTTGTAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR TCA 90 bp GCAGAAAACCACAGGATATTTACAACACACATTATATCCCCCTCCTaGGGTGGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTAT +
Preference number: 1 (lower is better)
Translates to: AENHRIFTTHIISPS*GGPSMSFLLCNSSY
Trigger: ATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCCACCTCAGGAGGGGGATATAATGTGTGTTGTAAATATCCTGTGGTTTTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR GCA 90 bp GATAATCACTTCTCCCTCGATGAATGTGAGCTCGTCATCGTTGTCTaGCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTT +
Preference number: 1 (lower is better)
Translates to: DNHFSLDECELVIVV*LAVINGLHSPHFIF
Trigger: AAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGACAACGATGACGAGCTCACATTCATCGAGGGAGAAGTGATTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 90 bp TATCTCCTCCTGTCGAAGATTCCACTCATATTCTACGTGGACGTGTaGATTGAACTTTCCAGATTTAGCCTGGGAAAGCAGATCTTCACA +
Preference number: 1 (lower is better)
Translates to: YLLLSKIPLIFYVDV*IELSRFSLGKQIFT
Trigger: TGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAAGTTCAATCCACACGTCCACGTAGAATATGAGTGGAATCTTCGACAGGAGGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR GCA 90 bp TACTGCATTGTTAGGAACAGAGTCAATTCTATGCCTTTCAACGGTTaGTGGAGACCACTTCTATTTGCAAAGCCAGCAGTTCCTATACTC +
Preference number: 1 (lower is better)
Translates to: YCIVRNRVNSMPFNG*WRPLLFAKPAVPIL
Trigger: GAGTATAGGAACTGCTGGCTTTGCAAATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCATAGAATTGACTCTGTTCCTAACAATGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR GCA 90 bp AACACAATTGAGAATACTGCATTGTTAGGAACAGAGTCAATTCTATaGCTTTCAACGGTTGCTGGAGACCACTTCTATTTGCAAAGCCAG +
Preference number: 1 (lower is better)
Translates to: NTIENTALLGTESIL*LSTVAGDHFYLQSQ
Trigger: CTGGCTTTGCAAATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCATAGAATTGACTCTGTTCCTAACAATGCAGTATTCTCAATTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR GCA 90 bp GCAAGAGTTCAGAAGTTCCTAATTTGTCTAGTTCCAAAGACTGAATaGGAGAAATATGAACCCCCATTTCCCTATGGATGCCAGAACATT +
Preference number: 1 (lower is better)
Translates to: ARVQKFLICLVPKTE*EKYEPPFPYGCQNI
Trigger: AATGTTCTGGCATCCATAGGGAAATGGGGGTTCATATTTCTCGCATTCAGTCTTTGGAACTAGACAAATTAGGAACTTCTGAACTCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR TCA 90 bp AGTGCAATTCATAGCAGCGTTCAAAAACTTGGTTATGAATTGACTTaGAGGTGGACAGAGCTTAAGACTGGAAAAATTATCTATAATTGG +
Preference number: 1 (lower is better)
Translates to: SAIHSSVQKLGYELT*RWTELKTGKIIYNW
Trigger: CCAATTATAGATAATTTTTCCAGTCTTAAGCTCTGTCCACCTTCAAGTCAATTCATAACCAAGTTTTTGAACGCTGCTATGAATTGCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR TCA 90 bp TTCACAGTGCAATTCATAGCAGCGTTCAAAAACTTGGTTATGAATTaGCTTGAAGGTGGACAGAGCTTAAGACTGGAAAAATTATCTATA +
Preference number: 1 (lower is better)
Translates to: FTVQFIAAFKNLVMN*LEGGQSLRLEKLSI
Trigger: TATAGATAATTTTTCCAGTCTTAAGCTCTGTCCACCTTCAAGTCAATTCATAACCAAGTTTTTGAACGCTGCTATGAATTGCACTGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTGCCAGAATGACACATaGGCCTCGGACTCAGGGAAC +
Preference number: 2 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATCQNDT*ASDSGN
Trigger: GTTCCCTGAGTCCGAGGCTCATGTGTCATTCTGGCA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCTTCCATCCGGACACTaGTGTGGCTTCAGTACCGAG +
Preference number: 2 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLPSGH*CGFSTE
Trigger: CTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCAATGTAGTGCCAGAATaGCACATGAGCCTCGGACTC +
Preference number: 2 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATNVVPE*HMSLGL
Trigger: GAGTCCGAGGCTCATGTGTCATTCTGGCACTACATT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGCGGTGGTCTCGGCGATaGACTCCGAGACAGAGATCT +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRRWSRR*TPRQRS
Trigger: AGATCTCTGTCTCGGAGTTCATCGCCGAGACCACCG...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR GCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTTCTCTCCCGCACTCTaGTCTCCACGGAAGGCCATG +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRFSPAL*SPRKAM
Trigger: CATGGCCTTCCGTGGAGAGCAGAGTGCGGGAGAGAA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGATCCGGACACTGGTGTaGCTTCAGTACCGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRIRTLV*LQYRGC
Trigger: GCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGAT...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGGCAGCAGTCTTGCATaGAGGATGTGGACAATCTTA +
Preference number: 2 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATGSSLA*RMWTIL
Trigger: TAAGATTGTCCACATCCTTCATGCAAGACTGCTGCC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGAGGTGGCCCTTCCATaGGTTTCTTACTCTGTAACA +
Preference number: 2 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATEVALP*VSYSVT
Trigger: TGTTACAGAGTAAGAAACTCATGGAAGGGCCACCTC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTGCCAGAATGACACATaGGCCTCGGACTCAGGGAAC +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRCQNDT*ASDSGN
Trigger: GTTCCCTGAGTCCGAGGCTCATGTGTCATTCTGGCA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCTTGCTTTCCTGGAGCTGATGCATaGTGTATCCTCCTTGCCGGC +
Preference number: 2 (lower is better)
Translates to: GVSGRVGVRSLESSDACFPGADA*CILLAG
Trigger: GCCGGCAAGGAGGATACAGCATGCATCAGCTCCAGG...AAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGCTTTTCCTAAGGGTTaGGTTGGGAGTTGTGCTTCT +
Preference number: 2 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATAFPKG*VGSCAS
Trigger: AGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGCTCCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGC +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRLHGRP*LGPLLC
Trigger: GCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGAG...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCAGGGAACAGTTCCACTaGCTGTGGAGTACAACTATT +
Preference number: 2 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATREQFH*LWSTTI
Trigger: AATAGTTGTACTCCACAGTCAGTGGAACTGTTCCCT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGAGCAACCTCAGATaGAGACTTCCATCCGGACAC +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRLSNLR*RLPSGH
Trigger: GTGTCCGGATGGAAGTCTGCATCTGAGGTTGCTCAG...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGATCCCCCTCCTGAGGTaGCCCTTCCATGAGTTTCTT +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRIPLLR*PFHEFL
Trigger: AAGAAACTCATGGAAGGGCCACCTCAGGAGGGGGAT...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCTTGGTTTCAGCACCTaGATTCTACATACAGTAGGG +
Preference number: 2 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLGFST*ILHTVG
Trigger: CCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCATGCTCTGTTTGGTGTaGAAATTCACATGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATMLCLV*KFTCAL
Trigger: CAGGGCACATGTGAATTTCCACACCAAACAGAGCAT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp GGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCTTGCTTTCTTCCATCCGGACACTaGTGTGGCTTCAGTACCGAG +
Preference number: 2 (lower is better)
Translates to: GVSGRVGVRSLESSDACFLPSGH*CGFSTE
Trigger: CTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAG...AAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp GGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGGTCCGAGACAGAGATCTaGTCCGGCATCCATTTCTGG +
Preference number: 2 (lower is better)
Translates to: GRTLGPRAVFAELVLDCWSETEI*SGIHFW
Trigger: CCAGAAATGGATGCCGGACCAGATCTCTGTCTCGGA...CCAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp GGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGGTTCCCTGGGAGCCGCTaGACATCCTCAATAATGGCT +
Preference number: 2 (lower is better)
Translates to: GRTLGPRAVFAELVLDCWFPGSR*TSSIMA
Trigger: AGCCATTATTGAGGATGTCCAGCGGCTCCCAGGGAA...CCAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp TTCATCTGTGGTTTGGGAGGTAAGTCTGAGAGTTGGGGTTTGGGTGGCAGGTCCTGCCAGAATGACACATaGGCCTCGGACTCAGGGAAC +
Preference number: 2 (lower is better)
Translates to: FICGLGGKSESWGLGGRSCQNDT*ASDSGN
Trigger: GTTCCCTGAGTCCGAGGCTCATGTGTCATTCTGGCA...GGACCTGCCACCCAAACCCCAACTCTCAGACTTACCTCCCAAACCACAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp TGGTACGGGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCGCTAGATGCCAAGGATaGCTTTGGCAAACCAGTAAG +
Preference number: 2 (lower is better)
Translates to: WYGRLWQSRREVVGVFRCARCQG*LWQTSK
Trigger: CTTACTGGTTTGCCAAAGCCATCCTTGGCATCTAGC...GCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCCCGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTGAGGGGGAGCCTCCGTaGTTGGTGATGTGGGCGAGT +
Preference number: 2 (lower is better)
Translates to: VCLAVINGLHSPHFIFPREGEPP*LVMWAS
Trigger: ACTCGCCCACATCACCAACCACGGAGGCTCCCCCTC...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCATGCTTCAACACATCTaGGAGATGTGCATTCATAAC +
Preference number: 2 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATMLQHI*EMCIHN
Trigger: GTTATGAATGCACATCTCTCAGATGTGTTGAAGCAT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGCTATATACACACTGTaGCCAGGGTTACATGAAGGC +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRAIYTL*PGLHEG
Trigger: GCCTTCATGTAACCCTGGGCACAGTGTGTATATAGC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCAATGGATGCAATGGATaGTTCAACACATCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATNGCNG*FNTSER
Trigger: TCTCTCAGATGTGTTGAAGCATCCATTGCATCCATT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTTGGGTTGGGAGTTGTaGTTCTGTGAAATTAACATC +
Preference number: 2 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLGWEL*FCEINI
Trigger: GATGTTAATTTCACAGAAGCACAACTCCCAACCCAA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTGCCAAGGATGGCTTTaGCAAACCAGTAAGGCGCGC +
Preference number: 2 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVCQGWL*QTSKAR
Trigger: GCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGCTAGATGCCAAGGATaGCTTTGGCAAACCAGTAAG +
Preference number: 2 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNARCQG*LWQTSK
Trigger: CTTACTGGTTTGCCAAAGCCATCCTTGGCATCTAGC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGCTAGATGCCAAGGATaGCTTTGGCAAACCAGTAAG +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRARCQG*LWQTSK
Trigger: CTTACTGGTTTGCCAAAGCCATCCTTGGCATCTAGC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGCTTTTCCTAAGGGTTaGGTTGGGAGTTGTGCTTCT +
Preference number: 2 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNAFPKG*VGSCAS
Trigger: AGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGATTATATCCCCCTCCTaGGGTGGCCCTTCCATGAGT +
Preference number: 2 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVIISPS*GGPSMS
Trigger: ACTCATGGAAGGGCCACCTCAGGAGGGGGATATAAT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp AGATCTCCTTTGACTCCCTTTAGGTCTCCTTTTAACAAAGAATCCAAGGTGAAGTGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 2 (lower is better)
Translates to: RSPLTPFRSPFNKESKVKCAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...CTTCACCTTGGATTCTTTGTTAAAAGGAGACCTAAAGGGAGTCAAAGGAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
3UTR-3UTR TCA 90 bp TTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGTGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 2 (lower is better)
Translates to: LLLQTSSLSEGLFYLGLECAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...CTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
3UTR-3UTR TCA 90 bp TGGTACGGGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCCTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGAACT +
Preference number: 2 (lower is better)
Translates to: WYGRLWQSRREVVGVFRCLSATF*GSLGRT
Trigger: AGTTCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...GCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCCCGTACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR GCA 90 bp GTTCTATCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGGCTATATACACACTGTaGCCAGGGTTACATGAAGGC +
Preference number: 2 (lower is better)
Translates to: VLSWSRASSSSVTVFLQLAIYTL*PGLHEG
Trigger: GCCTTCATGTAACCCTGGGCACAGTGTGTATATAGC...CAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGATAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGCCTTTCAACGGTTGCTaGAGACCACTTCTATTTGCA +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRPFNGC*RPLLFA
Trigger: TGCAAATAGAAGTGGTCTCCAGCAACCGTTGAAAGG...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACATGCTCTGTTTGGTGTaGAAATTCACATGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNMLCLV*KFTCAL
Trigger: CAGGGCACATGTGAATTTCCACACCAAACAGAGCAT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAATTATATCCCCCTCCTaGGGTGGCCCTTCCATGAGT +
Preference number: 2 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKIISPS*GGPSMS
Trigger: ACTCATGGAAGGGCCACCTCAGGAGGGGGATATAAT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTACCCTCATACTGGTaGAGGCAGAAAACCACAGGA +
Preference number: 2 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVLPSYW*RQKTTG
Trigger: TCCTGTGGTTTTCTGCCTTCACCAGTATGAGGGTAG...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGAATGTAGTGCCAGAATaGCACATGAGCCTCGGACTC +
Preference number: 2 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVNVVPE*HMSLGL
Trigger: GAGTCCGAGGCTCATGTGTCATTCTGGCACTACATT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGAGACCACTTCTATTTaGAAAGCCAGCAGTTCCTAT +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRETTSI*KASSSY
Trigger: ATAGGAACTGCTGGCTTTGCAAATAGAAGTGGTCTC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGGGAGACCACTTCTATTTaGAAAGCCAGCAGTTCCTAT +
Preference number: 2 (lower is better)
Translates to: GRTLGPRAVFAELVLDCWETTSI*KASSSY
Trigger: ATAGGAACTGCTGGCTTTGCAAATAGAAGTGGTCTC...CCAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR GCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACACAGAGTCAATTCTATaGCTTTCAACGGTTGCTGGA +
Preference number: 2 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNTESIL*LSTVAG
Trigger: TCCAGCAACCGTTGAAAGGCATAGAATTGACTCTGT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp ATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGAGCAGATTTTTCAGCAGGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: IQGEDHIVAQTLEQIFQQVFLQL*SRVVKL
Trigger: CAGCTTCACCACGCGGCTGCACAACTGCAGGAACAC...CTGCTGAAAAATCTGCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
3UTR-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAATCCCCCTCCTGAGGTaGCCCTTCCATGAGTTTCTT +
Preference number: 2 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKIPLLR*PFHEFL
Trigger: AAGAAACTCATGGAAGGGCCACCTCAGGAGGGGGAT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp GGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGGACCCCCATTTCCCTATaGATGCCAGAACATTCTATA +
Preference number: 2 (lower is better)
Translates to: GRTLGPRAVFAELVLDCWTPISL*MPEHSI
Trigger: TATAGAATGTTCTGGCATCCATAGGGAAATGGGGGT...CCAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CAA 90 bp CTGCCAGTCACAACCCAGCATGTCAACTGGTTCCTCATGCTCTGTTaGGTGTGGAAATTCACATGTGCCCTGACACTGAGGAAGCAATTG +
Preference number: 2 (lower is better)
Translates to: LPVTTQHVNWFLMLC*VWKFTCALTLRKQL
Trigger: CAATTGCTTCCTCAGTGTCAGGGCACATGTGAATTTCCACACCAAACAGAGCATGAGGAACCAGTTGACATGCTGGGTTGTGACTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGGCAGCAGTCTTGCATaGAGGATGTGGACAATCTTA +
Preference number: 2 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVGSSLA*RMWTIL
Trigger: TAAGATTGTCCACATCCTTCATGCAAGACTGCTGCC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGAGGTGGCCCTTCCATaGGTTTCTTACTCTGTAACA +
Preference number: 2 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVEVALP*VSYSVT
Trigger: TGTTACAGAGTAAGAAACTCATGGAAGGGCCACCTC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp TCCTTTGTAAGAGTAGAAAACTTGACAAACGCGGTGCCAAGGTCGGGGTTGTCTATTATATCCCCCTCCTaGGGTGGCCCTTCCATGAGT +
Preference number: 2 (lower is better)
Translates to: SFVRVENLTNAVPRSGLSIISPS*GGPSMS
Trigger: ACTCATGGAAGGGCCACCTCAGGAGGGGGATATAAT...AGACAACCCCGACCTTGGCACCGCGTTTGTCAAGTTTTCTACTCTTACAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACATGCTTCAACACATCTaGGAGATGTGCATTCATAAC +
Preference number: 2 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNMLQHI*EMCIHN
Trigger: GTTATGAATGCACATCTCTCAGATGTGTTGAAGCAT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGCAAAGGTATTTCTACTaGGTTTTCCTATGTCCCACA +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRQRYFY*VFLCPT
Trigger: TGTGGGACATAGGAAAACTCAGTAGAAATACCTTTG...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
3UTR-3UTR TCA 90 bp TTCATCTGTGGTTTGGGAGGTAAGTCTGAGAGTTGGGGTTTGGGTGGCAGGTCCTCAGAATCCCATTCTTaGCTGAACACTTCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: FICGLGGKSESWGLGGRSSESHS*LNTSSS
Trigger: AGAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGA...GGACCTGCCACCCAAACCCCAACTCTCAGACTTACCTCCCAAACCACAGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR GCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGCTATATACACACTGTaGCCAGGGTTACATGAAGGC +
Preference number: 2 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVAIYTL*PGLHEG
Trigger: GCCTTCATGTAACCCTGGGCACAGTGTGTATATAGC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp TGTGGATTGAACTTTCCAGATTTAGCCTGGGAAAGCAGATCTTCACACTGGGTAGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: CGLNFPDLAWESRSSHWVVFLQL*SRVVKL
Trigger: CAGCTTCACCACGCGGCTGCACAACTGCAGGAACAC...TACCCAGTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAAGTTCAATCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGACCCAGCATGTCAACTaGTTCCTCATGCTCTGTTTG +
Preference number: 2 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVTQHVN*FLMLCL
Trigger: CAAACAGAGCATGAGGAACCAGTTGACATGCTGGGT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTTCTACGTGGACGTGTaGATTGAACTTTCCAGATTT +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRFYVDV*IELSRF
Trigger: AAATCTGGAAAGTTCAATCCACACGTCCACGTAGAA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTCAAAAACTTGGTTATaGATTGACTTGAAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNSKTWL*IDLKVD
Trigger: GTCCACCTTCAAGTCAATTCATAACCAAGTTTTTGA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATGCCAGAATGACACATaGGCCTCGGACTCAGGGAAC +
Preference number: 2 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTCQNDT*ASDSGN
Trigger: GTTCCCTGAGTCCGAGGCTCATGTGTCATTCTGGCA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCTTGCTTTAATGGATGCAATGGATaGTTCAACACATCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: GVSGRVGVRSLESSDACFNGCNG*FNTSER
Trigger: TCTCTCAGATGTGTTGAAGCATCCATTGCATCCATT...AAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR GCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTCCTGTTATCTCTGTaGGGATCATCCCATGTTGTT +
Preference number: 2 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVLLLSL*GSSHVV
Trigger: AACAACATGGGATGATCCGCACAGAGATAACAGGAG...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATGCCAAGGATGGCTTTaGCAAACCAGTAAGGCGCGC +
Preference number: 2 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTCQGWL*QTSKAR
Trigger: GCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp GTGGTGGCTTTTGTGGCAACTCTGCCAACTGTGATGATTTCTGAAAGATTTCGGCTGCCACTAGAGGTCTaGGTGCTTAGAGGGAGTGTT +
Preference number: 2 (lower is better)
Translates to: VVAFVATLPTVMISERFRLPLEV*VLRGSV
Trigger: AACACTCCCTCTAAGCACCCAGACCTCTAGTGGCAG...CCGAAATCTTTCAGAAATCATCACAGTTGGCAGAGTTGCCACAAAAGCCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGGCAGCAGTCTTGCATaGAGGATGTGGACAATCTTA +
Preference number: 2 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPGSSLA*RMWTIL
Trigger: TAAGATTGTCCACATCCTTCATGCAAGACTGCTGCC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAATTATATCCCCCTCCTaGGGTGGCCCTTCCATGAGT +
Preference number: 2 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTIISPS*GGPSMS
Trigger: ACTCATGGAAGGGCCACCTCAGGAGGGGGATATAAT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGAACTTGGTTATGAATTaGCTTGAAGGTGGACAGAGC +
Preference number: 2 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVNLVMN*LEGGQS
Trigger: GCTCTGTCCACCTTCAAGTCAATTCATAACCAAGTT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAAGGGAACAGTTCCACTaGCTGTGGAGTACAACTATT +
Preference number: 2 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKREQFH*LWSTTI
Trigger: AATAGTTGTACTCCACAGTCAGTGGAACTGTTCCCT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp TTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCGGTGGTCTCGGCGATaGACTCCGAGACAGAGATCT +
Preference number: 2 (lower is better)
Translates to: LLLQTSSLSEGLFYLGLERWSRR*TPRQRS
Trigger: AGATCTCTGTCTCGGAGTTCATCGCCGAGACCACCG...CTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
3UTR-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGTTAGATGTGGCATGTaGGATGGTCAGAATCCCATT +
Preference number: 2 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKVRCGM*DGQNPI
Trigger: AATGGGATTCTGACCATCTCACATGCCACATCTAAC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGATGTAAGTGCTAGATaGCAAGGATGGCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKDVSAR*QGWLWQ
Trigger: TTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGATGCCTTTCAACGGTTaGTGGAGACCACTTCTATTT +
Preference number: 2 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVMPFNG*WRPLLF
Trigger: AAATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCAT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTTAGGGCCTCTTCTTTaGTATTTGTCAATACTGATA +
Preference number: 2 (lower is better)
Translates to: ATSDADFHPDTGVASVPRLGPLL*YLSILI
Trigger: TATCAGTATTGACAAATAGCAAAGAAGAGGCCCTAA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAATCCCCCTCCTGAGGTaGCCCTTCCATGAGTTTCTT +
Preference number: 2 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTIPLLR*PFHEFL
Trigger: AAGAAACTCATGGAAGGGCCACCTCAGGAGGGGGAT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACTTGGTTTCAGCACCTaGATTCTACATACAGTAGGG +
Preference number: 2 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKLGFST*ILHTVG
Trigger: CCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp TGGGAGCCGCTGGACATCCTCAATAATGGCTTTTGTCAGGTCTTCCAGGCTGTTGGGAAAAGAAACACTTaGTTTCAGCACCTGGATTCT +
Preference number: 2 (lower is better)
Translates to: WEPLDILNNGFCQVFQAVGKRNT*FQHLDS
Trigger: AGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCC...AACAGCCTGGAAGACCTGACAAAAGCCATTATTGAGGATGTCCAGCGGCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp CAGAACATTCTATACAGGTCAAAATACCCAAGTTGGTTGAAAGCCAGGTGGGTTGCAAATGTCATTCCCTaGGAGCCGCTGGACATCCTC +
Preference number: 2 (lower is better)
Translates to: QNILYRSKYPSWLKARWVANVIP*EPLDIL
Trigger: GAGGATGTCCAGCGGCTCCCAGGGAATGACATTTGC...AACCCACCTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CAA 90 bp TCCCTATGGATGCCAGAACATTCTATACAGGTCAAAATACCCAAGTaGGTTGAAAGCCAGGTGGGTTCTGATGAGCCACAATCGCAGCAA +
Preference number: 2 (lower is better)
Translates to: SLWMPEHSIQVKIPK*VESQVGSDEPQSQQ
Trigger: TTGCTGCGATTGTGGCTCATCAGAACCCACCTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCTGGCATCCATAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CAA 90 bp TCCTCCTGTCGAAGATTCCACTCATATTCTACGTGGACGTGTGGATaGAACTTTCCAGATTTAGCCTGGGAAAGCAGATCTTCACACTGG +
Preference number: 2 (lower is better)
Translates to: SSCRRFHSYSTWTCG*NFPDLAWESRSSHW
Trigger: CCAGTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAAGTTCAATCCACACGTCCACGTAGAATATGAGTGGAATCTTCGACAGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGTGCCCAGGGTTACATaGAGGCAGCAGTCTTGCATG +
Preference number: 2 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNVPRVT*RQQSCM
Trigger: CATGCAAGACTGCTGCCTTCATGTAACCCTGGGCAC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
3UTR-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAAATGTAGTGCCAGAATaGCACATGAGCCTCGGACTC +
Preference number: 2 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTNVVPE*HMSLGL
Trigger: GAGTCCGAGGCTCATGTGTCATTCTGGCACTACATT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATTATTGCCCTGGAGCTaGTGCATGCTGTATCCTCCT +
Preference number: 2 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTLLPWS*CMLYPP
Trigger: AGGAGGATACAGCATGCATCAGCTCCAGGGCAATAA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGAGACCACTTCTATTTaGAAAGCCAGCAGTTCCTAT +
Preference number: 2 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKETTSI*KASSSY
Trigger: ATAGGAACTGCTGGCTTTGCAAATAGAAGTGGTCTC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAATGCCTTTCAACGGTTaGTGGAGACCACTTCTATTT +
Preference number: 2 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKMPFNG*WRPLLF
Trigger: AAATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCAT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGAATGGATGCAATGGATaGTTCAACACATCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVNGCNG*FNTSER
Trigger: TCTCTCAGATGTGTTGAAGCATCCATTGCATCCATT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTTTCAACTTGGCTGGTTaGCTGTTAGATGTGGCATGT +
Preference number: 2 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRFNLAG*LLDVAC
Trigger: ACATGCCACATCTAACAGGCAACCAGCCAAGTTGAA...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR GCA 90 bp TGGGAGCCGCTGGACATCCTCAATAATGGCTTTTGTCAGGTCTTCCAGGCTGTTATCCTGCTCATCTTCTaGCTGAAAGTGATATGTTCT +
Preference number: 2 (lower is better)
Translates to: WEPLDILNNGFCQVFQAVILLIF*LKVICS
Trigger: AGAACATATCACTTTCAGGCAGAAGATGAGCAGGAT...AACAGCCTGGAAGACCTGACAAAAGCCATTATTGAGGATGTCCAGCGGCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACTTCCATCCGGACACTaGTGTGGCTTCAGTACCGAG +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKLPSGH*CGFSTE
Trigger: CTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATCAAAATACCCAAGTTaGTTGAAAGCCAGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKSKYPS*LKARWV
Trigger: AACCCACCTGGCTTTCAACCAACTTGGGTATTTTGA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp TCTGAAAGATTTCGGGCGGGATGGTGGCTTTGTCTAGGGAGAGATGATCTGTTTAACTTGGTTATGAATTaGCTTGAAGGTGGACAGAGC +
Preference number: 2 (lower is better)
Translates to: SERFRAGWWLCLGRDDLFNLVMN*LEGGQS
Trigger: GCTCTGTCCACCTTCAAGTCAATTCATAACCAAGTT...AAACAGATCATCTCTCCCTAGACAAAGCCACCATCCCGCCCGAAATCTTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR GCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGCTATATACACACTGTaGCCAGGGTTACATGAAGGC +
Preference number: 2 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTAIYTL*PGLHEG
Trigger: GCCTTCATGTAACCCTGGGCACAGTGTGTATATAGC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTATGCCTTTCAACGGTTaGTGGAGACCACTTCTATTT +
Preference number: 2 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRMPFNG*WRPLLF
Trigger: AAATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCAT...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp CTGGAGCAGATTTTTCAGCAGTGTGGACAGTTCCTTTGTAAGAGTAGAAAACTTTCCGAGACAGAGATCTaGTCCGGCATCCATTTCTGG +
Preference number: 2 (lower is better)
Translates to: LEQIFQQCGQFLCKSRKLSETEI*SGIHFW
Trigger: CCAGAAATGGATGCCGGACCAGATCTCTGTCTCGGA...AAGTTTTCTACTCTTACAAAGGAACTGTCCACACTGCTGAAAAATCTGCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
3UTR-3UTR CCA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTCCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTT +
Preference number: 2 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRPGFVK*LLEISF
Trigger: AAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGG...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACTGGTGCTCGACTGCTaGGATAGTCCCTCAAACTTG +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKLVLDC*DSPSNL
Trigger: CAAGTTTGAGGGACTATCCCAGCAGTCGAGCACCAG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp CAGAACATTCTATACAGGTCAAAATACCCAAGTTGGTTGAAAGCCAGGTGGGTTGGCAGCAGTCTTGCATaGAGGATGTGGACAATCTTA +
Preference number: 2 (lower is better)
Translates to: QNILYRSKYPSWLKARWVGSSLA*RMWTIL
Trigger: TAAGATTGTCCACATCCTTCATGCAAGACTGCTGCC...AACCCACCTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAAGGGAACAGTTCCACTaGCTGTGGAGTACAACTATT +
Preference number: 2 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTREQFH*LWSTTI
Trigger: AATAGTTGTACTCCACAGTCAGTGGAACTGTTCCCT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACACTTGGTTTCAGCACCTaGATTCTACATACAGTAGGG +
Preference number: 2 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTLGFST*ILHTVG
Trigger: CCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAG...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAAACTTGGTTATGAATTaGCTTGAAGGTGGACAGAGC +
Preference number: 2 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTNLVMN*LEGGQS
Trigger: GCTCTGTCCACCTTCAAGTCAATTCATAACCAAGTT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGTGGAAATTCACATGTaGCCTGACACTGAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNVEIHM*PDTEEA
Trigger: TGCTTCCTCAGTGTCAGGGCACATGTGAATTTCCAC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
3UTR-3UTR GCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGTGGAAATTCACATGTaGCCTGACACTGAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKVEIHM*PDTEEA
Trigger: TGCTTCCTCAGTGTCAGGGCACATGTGAATTTCCAC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGCTAGATGCCAAGGATaGCTTTGGCAAACCAGTAAG +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKARCQG*LWQTSK
Trigger: CTTACTGGTTTGCCAAAGCCATCCTTGGCATCTAGC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGCTTTTCCTAAGGGTTaGGTTGGGAGTTGTGCTTCT +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKAFPKG*VGSCAS
Trigger: AGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp ATATATTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTCCGAGACAGAGATCTaGTCCGGCATCCATTTCTGG +
Preference number: 2 (lower is better)
Translates to: IYCFYRLLHFLKGCSILVSETEI*SGIHFW
Trigger: CCAGAAATGGATGCCGGACCAGATCTCTGTCTCGGA...GACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
3UTR-3UTR CCA 90 bp TGTGGATTGAACTTTCCAGATTTAGCCTGGGAAAGCAGATCTTCACACTGGGTATGTTTCCTACATTCTTaGCCAGCAAGAGTTCAGAAG +
Preference number: 2 (lower is better)
Translates to: CGLNFPDLAWESRSSHWVCFLHS*PARVQK
Trigger: CTTCTGAACTCTTGCTGGCCAAGAATGTAGGAAACA...TACCCAGTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAAGTTCAATCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAATGCTTCAACACATCTaGGAGATGTGCATTCATAAC +
Preference number: 2 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTMLQHI*EMCIHN
Trigger: GTTATGAATGCACATCTCTCAGATGTGTTGAAGCAT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR GCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAAATGGATGCAATGGATaGTTCAACACATCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTNGCNG*FNTSER
Trigger: TCTCTCAGATGTGTTGAAGCATCCATTGCATCCATT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCCTTTCAACGGTTGCTaGAGACCACTTCTATTTGCA +
Preference number: 2 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNPFNGC*RPLLFA
Trigger: TGCAAATAGAAGTGGTCTCCAGCAACCGTTGAAAGG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
3UTR-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACATGCTCTGTTTGGTGTaGAAATTCACATGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNMLCLV*KFTCAL
Trigger: CAGGGCACATGTGAATTTCCACACCAAACAGAGCAT...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
3UTR-3UTR CCA 90 bp ACAATCTTAAGGTTCTGCGTTTTGCTAGTCAGACAGGATATGAACAAAGGACACCCTTCATCTGTGGTTTaGGAGGTAAGTCTGAGAGTT +
Preference number: 2 (lower is better)
Translates to: TILRFCVLLVRQDMNKGHPSSVV*EVSLRV
Trigger: AACTCTCAGACTTACCTCCCAAACCACAGATGAAGG...GTGTCCTTTGTTCATATCCTGTCTGACTAGCAAAACGCAGAACCTTAAGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGTTAAAATGTGTAAATaGATGACCGGGACACTGAGC +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKVKMCK*MTGTLS
Trigger: GCTCAGTGTCCCGGTCATTCATTTACACATTTTAAC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
3UTR-3UTR GCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAACAGAGTCAATTCTATaGCTTTCAACGGTTGCTGGA +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKTESIL*LSTVAG
Trigger: TCCAGCAACCGTTGAAAGGCATAGAATTGACTCTGT...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGGGAAAAGAAACACTTaGTTTCAGCACCTGGATTCT +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKGKRNT*FQHLDS
Trigger: AGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAATGCTTCAACACATCTaGGAGATGTGCATTCATAAC +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKMLQHI*EMCIHN
Trigger: GTTATGAATGCACATCTCTCAGATGTGTTGAAGCAT...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGAGAACTCAAATTCCTaGTGGAAAACAAAACCGAAC +
Preference number: 2 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNENSNS*WKTKPN
Trigger: GTTCGGTTTTGTTTTCCATCAGGAATTTGAGTTCTC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
3UTR-3UTR TCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACAAAGGTATTTCTACTaGGTTTTCCTATGTCCCACA +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKQRYFY*VFLCPT
Trigger: TGTGGGACATAGGAAAACTCAGTAGAAATACCTTTG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
3UTR-3UTR GCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATTGGGTTGGGAGTTGTaGTTCTGTGAAATTAACATC +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKLGWEL*FCEINI
Trigger: GATGTTAATTTCACAGAAGCACAACTCCCAACCCAA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACACTCATATTCTACGTaGACGTGTGGATTGAACTTT +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKHSYST*TCGLNF
Trigger: AAAGTTCAATCCACACGTCCACGTAGAATATGAGTG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CAA 90 bp GGTGAGGGGCTGGGTAAATTTGCTTCCATAATATCATTAAAACTATaGTTTCCTACATTCTTGGCCAGCAAGAGTTCAGAAGTTCCTAAT +
Preference number: 2 (lower is better)
Translates to: GEGLGKFASIISLKL*FPTFLASKSSEVPN
Trigger: ATTAGGAACTTCTGAACTCTTGCTGGCCAAGAATGTAGGAAACAATAGTTTTAATGATATTATGGAAGCAAATTTACCCAGCCCCTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR TCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATCAAAAACTTGGTTATaGATTGACTTGAAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: MGKETLGFSTWILHTVGKSKTWL*IDLKVD
Trigger: GTCCACCTTCAAGTCAATTCATAACCAAGTTTTTGA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTCAAAAACTTGGTTATaGATTGACTTGAAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNSKTWL*IDLKVD
Trigger: GTCCACCTTCAAGTCAATTCATAACCAAGTTTTTGA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
3UTR GCA 72 bp GCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAG +
Preference number: 3 (lower is better)
Translates to: ASSSSVTVFLQL*SRVVKLDVVGE
Trigger: CTCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
3UTR CCA 72 bp CTGCGCCTTTGTTTGGGGGCCCATGAGGTAGTGGGCTaGGAGGGTCGGATAGGGTTCTCTTGTGTCCGGGTG +
Preference number: 3 (lower is better)
Translates to: LRLCLGAHEVVG*EGRIGFSCVRV
Trigger: CACCCGGACACAAGAGAACCCTATCCGACCCTCCCAGCCCACTACCTCATGGGCCCCCAAACAAAGGCGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGAACTGCGCCTTTGTTaGGGGGCCCATGAGGTAGTG +
Preference number: 3 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATELRLC*GAHEVV
Trigger: CACTACCTCATGGGCCCCCAAACAAAGGCGCAGTTC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR TCA 72 bp TTACCCCAAGGAACTGCGCCTTTGTTTGGGGGCCCATaGGGTAGTGGGCTGGGAGGGTCGGATAGGGTTCTC +
Preference number: 3 (lower is better)
Translates to: LPQGTAPLFGGP*GSGLGGSDRVL
Trigger: GAGAACCCTATCCGACCCTCCCAGCCCACTACCTCATGGGCCCCCAAACAAAGGCGCAGTTCCTTGGGGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp AGGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGTTGAAGGTGGGCCAGTaGGACCTTTCCCGGCGTTCC +
Preference number: 3 (lower is better)
Translates to: RKNSWAKGSLCRTGARLLLKVGQ*DLSRRS
Trigger: GGAACGCCGGGAAAGGTCCAACTGGCCCACCTTCAA...CAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp GGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCTTGCTTTTCTCCAATTTGGGGCTaGGGGGCCAGTTCTGTGGGC +
Preference number: 3 (lower is better)
Translates to: GVSGRVGVRSLESSDACFSPIWG*GASSVG
Trigger: GCCCACAGAACTGGCCCCCAAGCCCCAAATTGGAGA...AAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR TCA 72 bp GTTCCTAGGAGGCAGAGGGGGAGCCTCCGTGGTTGGTaGTGTGGGCGAGTCTGTGCTTGTGGAAACGAAGAT +
Preference number: 3 (lower is better)
Translates to: VPRRQRGSLRGW*CGRVCACGNED
Trigger: ATCTTCGTTTCCACAAGCACAGACTCGCCCACATCACCAACCACGGAGGCTCCCCCTCTGCCTCCTAGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR GCA 72 bp TTTGTCAGGTCTTCCAGGCTGTTCTCTCCCGCACTCTaGTCTCCACGGAAGGCCATGGTTAGGGCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: FVRSSRLFSPAL*SPRKAMVRASS
Trigger: AGAAGAGGCCCTAACCATGGCCTTCCGTGGAGAGCAGAGTGCGGGAGAGAACAGCCTGGAAGACCTGACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 72 bp CTGAGCAACCTCAGATGCAGACTTCCATCCGGACACTaGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCC +
Preference number: 3 (lower is better)
Translates to: LSNLRCRLPSGH*CGFSTEAAKAA
Trigger: GGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTTGTCAAATGGCTTCTaGAGATCTCCTTTGACTCCC +
Preference number: 3 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLSNGF*RSPLTP
Trigger: GGGAGTCAAAGGAGATCTCAAGAAGCCATTTGACAA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 72 bp CTCTTCTTGGATAGGGTGGAGCTGCCACTAGAGGTCTaGGTGCTTAGAGGGAGTGTTGAAGGTGGGCCAGTT +
Preference number: 3 (lower is better)
Translates to: LFLDRVELPLEV*VLRGSVEGGPV
Trigger: AACTGGCCCACCTTCAACACTCCCTCTAAGCACCCAGACCTCTAGTGGCAGCTCCACCCTATCCAAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR TCA 72 bp GCGAGTCTGTGCTTGTGGAAACGAAGATCTGGTTGGTaGAGGCTCCATAGGAGAGCCGCTGTTTGTCCCTTG +
Preference number: 3 (lower is better)
Translates to: ASLCLWKRRSGW*RLHRRAAVCPL
Trigger: CAAGGGACAAACAGCGGCTCTCCTATGGAGCCTTCACCAACCAGATCTTCGTTTCCACAAGCACAGACTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 72 bp CGTATTGATTTTTCTGGGCAGTGGTACGGGCGTCTCTaGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGA +
Preference number: 3 (lower is better)
Translates to: RIDFSGQWYGRL*QSRREVVGVFR
Trigger: TCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCCCGTACCACTGCCCAGAAAAATCAATACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACATGAAGGCAGCAGTCTaGCATGAAGGATGTGGACAA +
Preference number: 3 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNMKAAV*HEGCGQ
Trigger: TTGTCCACATCCTTCATGCAAGACTGCTGCCTTCAT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGATGAAGGCAGCAGTCTaGCATGAAGGATGTGGACAA +
Preference number: 3 (lower is better)
Translates to: ATSDADFHPDTGVASVPRMKAAV*HEGCGQ
Trigger: TTGTCCACATCCTTCATGCAAGACTGCTGCCTTCAT...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACAAATACCCAAGTTGGTaGAAAGCCAGGTGGGTTCTG +
Preference number: 3 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNKYPSW*KARWVL
Trigger: CAGAACCCACCTGGCTTTCAACCAACTTGGGTATTT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR GCA 72 bp AGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCTTaGTTTTGGATGGCGTCTCTGGACTGCACATTTGGG +
Preference number: 3 (lower is better)
Translates to: RVGVRSLESSDA*FWMASLDCTFG
Trigger: CCCAAATGTGCAGTCCAGAGACGCCATCCAAAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR GCA 72 bp TGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATaGTTGCTTTTGGATGGCGTCTCTGGACTGCACATT +
Preference number: 3 (lower is better)
Translates to: WQSRREVVGVFR*LLLDGVSGLHI
Trigger: AATGTGCAGTCCAGAGACGCCATCCAAAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp TTCATCTGTGGTTTGGGAGGTAAGTCTGAGAGTTGGGGTTTGGGTGGCAGGTCCAAGGTGAAGATCACATaGTGGCTCAAACCCTGGAGC +
Preference number: 3 (lower is better)
Translates to: FICGLGGKSESWGLGGRSKVKIT*WLKPWS
Trigger: GCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTT...GGACCTGCCACCCAAACCCCAACTCTCAGACTTACCTCCCAAACCACAGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp GGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCTTGCTTTTCCTTCATCTGTGGTTaGGGAGGTAAGTCTGAGAGT +
Preference number: 3 (lower is better)
Translates to: GVSGRVGVRSLESSDACFSFICG*GGKSES
Trigger: ACTCTCAGACTTACCTCCCAAACCACAGATGAAGGA...AAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR TCA 72 bp AATGGGTGTGACTTCAGTGTGACCTCAGAGGGTTGCTaGGCCTTGGGTGAGACATCTCCAGTCTGGGATTTT +
Preference number: 3 (lower is better)
Translates to: NGCDFSVTSEGC*ALGETSPVWDF
Trigger: AAAATCCCAGACTGGAGATGTCTCACCCAAGGCTCAGCAACCCTCTGAGGTCACACTGAAGTCACACCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 72 bp TGTTCTCTCCCGCACTCTGCTCTCCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGCTATTTGTCAATACTG +
Preference number: 3 (lower is better)
Translates to: CSLPHSALHGRP*LGPLLCYLSIL
Trigger: CAGTATTGACAAATAGCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGAGAGCAGAGTGCGGGAGAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGATGAAGGCAGCAGTCTaGCATGAAGGATGTGGACAA +
Preference number: 3 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVMKAAV*HEGCGQ
Trigger: TTGTCCACATCCTTCATGCAAGACTGCTGCCTTCAT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGGAGACCACTTCTATTaGCAAAGCCAGCAGTTCCTA +
Preference number: 3 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVGDHFY*QSQQFL
Trigger: TAGGAACTGCTGGCTTTGCAAATAGAAGTGGTCTCC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGTGGCTATTCAAAGTTaGTATAGCAACCACTTAAGC +
Preference number: 3 (lower is better)
Translates to: ATSDADFHPDTGVASVPRVAIQS*YSNHLS
Trigger: GCTTAAGTGGTTGCTATACAAACTTTGAATAGCCAC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CAA 90 bp AGGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGTTCCTCATGCTCTGTTaGGTGTGGAAATTCACATGT +
Preference number: 3 (lower is better)
Translates to: RKNSWAKGSLCRTGARLLFLMLC*VWKFTC
Trigger: ACATGTGAATTTCCACACCAAACAGAGCATGAGGAA...CAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp CAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGAGCAGATTTTTACGGTGTTCCTGCAGTaGTGCAGCCGCGTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: QRIQGEDHIVAQTLEQIFTVFLQ*CSRVVK
Trigger: CTTCACCACGCGGCTGCACAACTGCAGGAACACCGT...AAAAATCTGCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
3UTR-3UTR CAA 90 bp TGGGAGCCGCTGGACATCCTCAATAATGGCTTTTGTCAGGTCTTCCAGGCTGTTGCGGATCATCCCATGTaGTTTTGCGTGCTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: WEPLDILNNGFCQVFQAVADHPM*FCVLSF
Trigger: AAAAGAGAGCACGCAAAACAACATGGGATGATCCGC...AACAGCCTGGAAGACCTGACAAAAGCCATTATTGAGGATGTCCAGCGGCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGTTCAACTTGGCTGGTaGCCTGTTAGATGTGGCATG +
Preference number: 3 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKVQLGW*PVRCGM
Trigger: CATGCCACATCTAACAGGCAACCAGCCAAGTTGAAC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR GCA 72 bp CACTGCCATATTCCTTATTGCCCTGGAGCTGATGCATaGTGTATCCTCCTTGCCGGCTCTGAGAATCTTCTT +
Preference number: 3 (lower is better)
Translates to: HCHIPYCPGADA*CILLAGSENLL
Trigger: AAGAAGATTCTCAGAGCCGGCAAGGAGGATACAGCATGCATCAGCTCCAGGGCAATAAGGAATATGGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTATGCCTTTCAACGGTaGCTGGAGACCACTTCTATT +
Preference number: 3 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVYAFQR*LETTSI
Trigger: AATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCATA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTGGGAAAAGAAACACTaGGTTTCAGCACCTGGATTC +
Preference number: 3 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVWEKKH*VSAPGF
Trigger: GAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR TCA 72 bp CTGTGCCCAGGGTTACATGAAGGCAGCAGTCTTGCATaGAGGATGTGGACAATCTTAAGGTTCTGCGTTTTG +
Preference number: 3 (lower is better)
Translates to: LCPGLHEGSSLA*RMWTILRFCVL
Trigger: CAAAACGCAGAACCTTAAGATTGTCCACATCCTTCATGCAAGACTGCTGCCTTCATGTAACCCTGGGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR CCA 72 bp CAGCATGTCAACTGGTTCCTCATGCTCTGTTTGGTGTaGAAATTCACATGTGCCCTGACACTGAGGAAGCAA +
Preference number: 3 (lower is better)
Translates to: QHVNWFLMLCLV*KFTCALTLRKQ
Trigger: TTGCTTCCTCAGTGTCAGGGCACATGTGAATTTCCACACCAAACAGAGCATGAGGAACCAGTTGACATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR CCA 72 bp CTGCTAAAGCTGCCAGTCACAACCCAGCATGTCAACTaGTTCCTCATGCTCTGTTTGGTGTGGAAATTCACA +
Preference number: 3 (lower is better)
Translates to: LLKLPVTTQHVN*FLMLCLVWKFT
Trigger: TGTGAATTTCCACACCAAACAGAGCATGAGGAACCAGTTGACATGCTGGGTTGTGACTGGCAGCTTTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATATGCCTTTCAACGGTaGCTGGAGACCACTTCTATT +
Preference number: 3 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKYAFQR*LETTSI
Trigger: AATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCATA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CAA 90 bp GTGGTGGCTTTTGTGGCAACTCTGCCAACTGTGATGATTTCTGAAAGATTTCGGGAGATATTCACACATTaGGAGCTGAAAGAGGCGCCT +
Preference number: 3 (lower is better)
Translates to: VVAFVATLPTVMISERFREIFTH*ELKEAP
Trigger: AGGCGCCTCTTTCAGCTCCAAATGTGTGAATATCTC...CCGAAATCTTTCAGAAATCATCACAGTTGGCAGAGTTGCCACAAAAGCCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp GTGGTGGCTTTTGTGGCAACTCTGCCAACTGTGATGATTTCTGAAAGATTTCGGGTGAGAAGGTTCAACTaGGCTGGTTGCCTGTTAGAT +
Preference number: 3 (lower is better)
Translates to: VVAFVATLPTVMISERFRVRRFN*AGCLLD
Trigger: ATCTAACAGGCAACCAGCCAAGTTGAACCTTCTCAC...CCGAAATCTTTCAGAAATCATCACAGTTGGCAGAGTTGCCACAAAAGCCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR TCA 72 bp AACAGCAGCTATATACACACTGTGCCCAGGGTTACATaGAGGCAGCAGTCTTGCATGAAGGATGTGGACAAT +
Preference number: 3 (lower is better)
Translates to: NSSYIHTVPRVT*RQQSCMKDVDN
Trigger: ATTGTCCACATCCTTCATGCAAGACTGCTGCCTTCATGTAACCCTGGGCACAGTGTGTATATAGCTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR GCA 72 bp GTCAGAATCCCATTCTTGACTGAACACTTCCTCCTCTaGCATACTTTCCGGATCCCGTCACTTTTCTTTAGC +
Preference number: 3 (lower is better)
Translates to: VRIPFLTEHFLL*HTFRIPSLFFS
Trigger: GCTAAAGAAAAGTGACGGGATCCGGAAAGTATGGCAGAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 72 bp CCAACTGTGATGATTTCTGAAAGATTTCGGGCGGGATaGTGGCTTTGTCTAGGGAGAGATGATCTGTTTTCC +
Preference number: 3 (lower is better)
Translates to: PTVMISERFRAG*WLCLGRDDLFS
Trigger: GGAAAACAGATCATCTCTCCCTAGACAAAGCCACCATCCCGCCCGAAATCTTTCAGAAATCATCACAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 72 bp GTTTTGCTAGTCAGACAGGATATGAACAAAGGACACTaGAAAGACCCCCTTCCTTTCAGGCTGTCCTTCGAT +
Preference number: 3 (lower is better)
Translates to: VLLVRQDMNKGH*KDPLPFRLSFD
Trigger: ATCGAAGGACAGCCTGAAAGGAAGGGGGTCTTTCCAGTGTCCTTTGTTCATATCCTGTCTGACTAGCAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp TGTGGATTGAACTTTCCAGATTTAGCCTGGGAAAGCAGATCTTCACACTGGGTAGGGTTGGGTTGGGAGTaGTGCTTCTGTGAAATTAAC +
Preference number: 3 (lower is better)
Translates to: CGLNFPDLAWESRSSHWVGLGWE*CFCEIN
Trigger: GTTAATTTCACAGAAGCACAACTCCCAACCCAACCC...TACCCAGTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAAGTTCAATCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR TCA 72 bp CACACATTATATCCCCCTCCTGAGGTGGCCCTTCCATaGGTTTCTTACTCTGTAACAGCAGCTATATACACA +
Preference number: 3 (lower is better)
Translates to: HTLYPPPEVALP*VSYSVTAAIYT
Trigger: TGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCCACCTCAGGAGGGGGATATAATGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR CCA 72 bp CTGTCGAAGATTCCACTCATATTCTACGTGGACGTGTaGATTGAACTTTCCAGATTTAGCCTGGGAAAGCAG +
Preference number: 3 (lower is better)
Translates to: LSKIPLIFYVDV*IELSRFSLGKQ
Trigger: CTGCTTTCCCAGGCTAAATCTGGAAAGTTCAATCCACACGTCCACGTAGAATATGAGTGGAATCTTCGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 72 bp ATCTCCTCCTGTCGAAGATTCCACTCATATTCTACGTaGACGTGTGGATTGAACTTTCCAGATTTAGCCTGG +
Preference number: 3 (lower is better)
Translates to: ISSCRRFHSYST*TCGLNFPDLAW
Trigger: CCAGGCTAAATCTGGAAAGTTCAATCCACACGTCCACGTAGAATATGAGTGGAATCTTCGACAGGAGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp CAGAACATTCTATACAGGTCAAAATACCCAAGTTGGTTGAAAGCCAGGTGGGTTATGAAGGCAGCAGTCTaGCATGAAGGATGTGGACAA +
Preference number: 3 (lower is better)
Translates to: QNILYRSKYPSWLKARWVMKAAV*HEGCGQ
Trigger: TTGTCCACATCCTTCATGCAAGACTGCTGCCTTCAT...AACCCACCTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp GTTTTGTACAAGGAAGTCAACCAAATGGAGAGATGTCTGATCTGCAGTTCGGACTGGGAAAAGAAACACTaGGTTTCAGCACCTGGATTC +
Preference number: 3 (lower is better)
Translates to: VLYKEVNQMERCLICSSDWEKKH*VSAPGF
Trigger: GAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCA...GTCCGAACTGCAGATCAGACATCTCTCCATTTGGTTGACTTCCTTGTACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTGTGGCTATTCAAAGTTaGTATAGCAACCACTTAAGC +
Preference number: 3 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRVAIQS*YSNHLS
Trigger: GCTTAAGTGGTTGCTATACAAACTTTGAATAGCCAC...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR TCA 72 bp CACAGGATATTTACAACACACATTATATCCCCCTCCTaGGGTGGCCCTTCCATGAGTTTCTTACTCTGTAAC +
Preference number: 3 (lower is better)
Translates to: HRIFTTHIISPS*GGPSMSFLLCN
Trigger: GTTACAGAGTAAGAAACTCATGGAAGGGCCACCTCAGGAGGGGGATATAATGTGTGTTGTAAATATCCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR GCA 72 bp GTTAGGAACAGAGTCAATTCTATGCCTTTCAACGGTTaGTGGAGACCACTTCTATTTGCAAAGCCAGCAGTT +
Preference number: 3 (lower is better)
Translates to: VRNRVNSMPFNG*WRPLLFAKPAV
Trigger: AACTGCTGGCTTTGCAAATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCATAGAATTGACTCTGTTCCTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR GCA 72 bp GCTCTCCACGGAAGGCCATGGTTAGGGCCTCTTCTTTaGTATTTGTCAATACTGATATCCATGCTACATAAT +
Preference number: 3 (lower is better)
Translates to: ALHGRPWLGPLL*YLSILISMLHN
Trigger: ATTATGTAGCATGGATATCAGTATTGACAAATAGCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 72 bp AAGAGCATGGGAAAAGAAACACTTGGTTTCAGCACCTaGATTCTACATACAGTAGGGAAACTGTGTGAAGGG +
Preference number: 3 (lower is better)
Translates to: KSMGKETLGFST*ILHTVGKLCEG
Trigger: CCCTTCACACAGTTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCATGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR CCA 72 bp TGCCAGAACATTCTATACAGGTCAAAATACCCAAGTTaGTTGAAAGCCAGGTGGGTTCTGATGAGCCACAAT +
Preference number: 3 (lower is better)
Translates to: CQNILYRSKYPS*LKARWVLMSHN
Trigger: ATTGTGGCTCATCAGAACCCACCTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 72 bp TTTCCAGATTTAGCCTGGGAAAGCAGATCTTCACACTaGGTAGCTTTTAGTCTCTTTGCTATGTCTAGGGCA +
Preference number: 3 (lower is better)
Translates to: FPDLAWESRSSH*VAFSLFAMSRA
Trigger: TGCCCTAGACATAGCAAAGAGACTAAAAGCTACCCAGTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 72 bp ACTGTGATGATTTCTGAAAGATTTCGGGCGGGATGGTaGCTTTGTCTAGGGAGAGATGATCTGTTTTCCTTA +
Preference number: 3 (lower is better)
Translates to: TVMISERFRAGW*LCLGRDDLFSL
Trigger: TAAGGAAAACAGATCATCTCTCCCTAGACAAAGCCACCATCCCGCCCGAAATCTTTCAGAAATCATCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp CAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGAGCAGATTTTTTATGCCTTTCAACGGTaGCTGGAGACCACTTCTATT +
Preference number: 3 (lower is better)
Translates to: QRIQGEDHIVAQTLEQIFYAFQR*LETTSI
Trigger: AATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCATA...AAAAATCTGCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGGGTTGGGTTGGGAGTaGTGCTTCTGTGAAATTAAC +
Preference number: 3 (lower is better)
Translates to: MGKETLGFSTWILHTVGKGLGWE*CFCEIN
Trigger: GTTAATTTCACAGAAGCACAACTCCCAACCCAACCC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CAA 90 bp TCTGAAAGATTTCGGGCGGGATGGTGGCTTTGTCTAGGGAGAGATGATCTGTTTCCTCTTCTTTGCTATTaGTCAATACTGATATCCATG +
Preference number: 3 (lower is better)
Translates to: SERFRAGWWLCLGRDDLFPLLCY*SILISM
Trigger: CATGGATATCAGTATTGACAAATAGCAAAGAAGAGG...AAACAGATCATCTCTCCCTAGACAAAGCCACCATCCCGCCCGAAATCTTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CCA 72 bp CCTTTTAACAAAGAATCCAAGGTGAAGATCACATTGTaGCTCAAACCCTGGAGCAGATTTTTCAGCAGTGTG +
Preference number: 3 (lower is better)
Translates to: PFNKESKVKITL*LKPWSRFFSSV
Trigger: CACACTGCTGAAAAATCTGCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
3UTR-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATATGCCTTTCAACGGTaGCTGGAGACCACTTCTATT +
Preference number: 3 (lower is better)
Translates to: MGKETLGFSTWILHTVGKYAFQR*LETTSI
Trigger: AATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCATA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CAA 90 bp TTTTTGTCTTCGGCATTAGGTTTTACTTGGCAGGTGAGAAGGTTCAACTTGGCTACAGAACCCACCTCTTaGCTAATGTTGCATTTTCAG +
Preference number: 3 (lower is better)
Translates to: FLSSALGFTWQVRRFNLATEPTS*LMLHFQ
Trigger: CTGAAAATGCAACATTAGCAAAGAGGTGGGTTCTGT...AGCCAAGTTGAACCTTCTCACCTGCCAAGTAAAACCTAATGCCGAAGACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp GTGGTGGCTTTTGTGGCAACTCTGCCAACTGTGATGATTTCTGAAAGATTTCGGTTGAACAGGTCTTCCTaGAAAACCTATGATCTACAT +
Preference number: 3 (lower is better)
Translates to: VVAFVATLPTVMISERFRLNRSS*KTYDLH
Trigger: ATGTAGATCATAGGTTTTCAAGGAAGACCTGTTCAA...CCGAAATCTTTCAGAAATCATCACAGTTGGCAGAGTTGCCACAAAAGCCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR GCA 72 bp GAGAATACTGCATTGTTAGGAACAGAGTCAATTCTATaGCTTTCAACGGTTGCTGGAGACCACTTCTATTTG +
Preference number: 3 (lower is better)
Translates to: ENTALLGTESIL*LSTVAGDHFYL
Trigger: CAAATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCATAGAATTGACTCTGTTCCTAACAATGCAGTATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR GCA 72 bp CAGAAGTTCCTAATTTGTCTAGTTCCAAAGACTGAATaGGAGAAATATGAACCCCCATTTCCCTATGGATGC +
Preference number: 3 (lower is better)
Translates to: QKFLICLVPKTE*EKYEPPFPYGC
Trigger: GCATCCATAGGGAAATGGGGGTTCATATTTCTCGCATTCAGTCTTTGGAACTAGACAAATTAGGAACTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACACAGAACCCACCTCTTaGCTAATGTTGCATTTTCAG +
Preference number: 3 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNTEPTS*LMLHFQ
Trigger: CTGAAAATGCAACATTAGCAAAGAGGTGGGTTCTGT...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
3UTR-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATCATCCCATGTTGTTTaGCGTGCTCTCTTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: MGKETLGFSTWILHTVGKSSHVV*RALFSL
Trigger: AAGAGAAAAGAGAGCACGCAAAACAACATGGGATGA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp GTTTTGTACAAGGAAGTCAACCAAATGGAGAGATGTCTGATCTGCAGTTCGGACAGATCCACACCCTTTTaGGTCTTGATTTCATTAACT +
Preference number: 3 (lower is better)
Translates to: VLYKEVNQMERCLICSSDRSTPF*VLISLT
Trigger: AGTTAATGAAATCAAGACCAAAAAGGGTGTGGATCT...GTCCGAACTGCAGATCAGACATCTCTCCATTTGGTTGACTTCCTTGTACAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGTGGCTATTCAAAGTTaGTATAGCAACCACTTAAGC +
Preference number: 3 (lower is better)
Translates to: MGKETLGFSTWILHTVGKVAIQS*YSNHLS
Trigger: GCTTAAGTGGTTGCTATACAAACTTTGAATAGCCAC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR-3UTR CAA 90 bp TCATTAAAACTATTGTTTCCTACATTCTTGGCCAGCAAGAGTTCAGAAGTTCCTGGCATTAGGTTTTACTaGGCAGGTGAGAAGGTTCAA +
Preference number: 3 (lower is better)
Translates to: SLKLLFPTFLASKSSEVPGIRFY*AGEKVQ
Trigger: TTGAACCTTCTCACCTGCCAAGTAAAACCTAATGCC...AGGAACTTCTGAACTCTTGCTGGCCAAGAATGTAGGAAACAATAGTTTTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp ACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAGTGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: TVFLQLCSRVVKLDVVGECAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...CTCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
3UTR CAA 72 bp AGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTaGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RASSSSVTVFLQ*CSRVVKLDVVG
Trigger: GCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCTCGCGGCTCTCGGGTaGGAAAGCGAACTGCGACCG +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLAALG*ESELRP
Trigger: CGGTCGCAGTTCGCTTTCCCACCCGAGAGCCGCGAG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000518721.6
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGAGGGGGAGCCTCCGTaGTTGGTGATGTGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATEGEPP*LVMWAS
Trigger: ACTCGCCCACATCACCAACCACGGAGGCTCCCCCTC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCCCCCAGCTGTGGTTTaGGGGGCAGTTCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATPPAVV*GAVLLA
Trigger: AGCCAGGAGAACTGCCCCCCAAACCACAGCTGGGGG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp ACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAGGGAGAGCCTGGAGGCTaGAGATCTCATGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TVFLQLCSRVVKLDVVGEGEPGG*RSHVSA
Trigger: GGCTGAGACATGAGATCTTCAGCCTCCAGGCTCTCC...CTCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGAGTGGCAGAAGCTCTaGGGTCTGGGTGAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATEWQKL*GLGERS
Trigger: AGAGCGCTCACCCAGACCTCAGAGCTTCTGCCACTC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCAGCCTCCGTGGTTGGTaGTGTGGGCGAGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATSLRGW*CGRVCA
Trigger: AGCACAGACTCGCCCACATCACCAACCACGGAGGCT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp ACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAGCCTGGAGCTGATGCATaGTGTATCCTCCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: TVFLQLCSRVVKLDVVGEPGADA*CILLAG
Trigger: GCCGGCAAGGAGGATACAGCATGCATCAGCTCCAGG...CTCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGTCTCCCCAAGCTCCTaGCCAGGTTCCAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATVSPSS*PGSSSG
Trigger: ACCACTGCTGGAACCTGGGCAGGAGCTTGGGGAGAC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCGGTGGTCTCGGCGATaGACTCCGAGACAGAGATCT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATRWSRR*TPRQRS
Trigger: AGATCTCTGTCTCGGAGTTCATCGCCGAGACCACCG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR TCA 90 bp CAGCGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTCGGTGGTCTCGGCGATaGACTCCGAGACAGAGATCT +
Preference number: 4 (lower is better)
Translates to: QRDGVPAVVQPRGEAGRGRWSRR*TPRQRS
Trigger: AGATCTCTGTCTCGGAGTTCATCGCCGAGACCACCG...ACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR TCA 90 bp GTTCTATCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGTGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: VLSWSRASSSSVTVFLQLCAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...CAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGATAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR GCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGGTGGGAAAGCGAACTaGGACCGGGAAGCGCCGGCT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNGGKAN*DREAPA
Trigger: AGCCGGCGCTTCCCGGTCGCAGTTCGCTTTCCCACC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000518721.6
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGACCTGGCGGGCCGCTaGGCATTATTCCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRDLAGR*ALFHRG
Trigger: CCCGCGATGGAATAATGCCCAGCGGCCCGCCAGGTC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000518721.6
CDS-3UTR CCA 90 bp CGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGTGGAGTGCTGAATCCTaGCAGTGCCAGCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RDGVPAVVQPRGEAGRGGWSAES*QCQLVL
Trigger: CAGGACAAGCTGGCACTGCCAGGATTCAGCACTCCA...CCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCCGTGGTTGGTGATGTaGGCGAGTCTGTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATPWLVM*ASLCLW
Trigger: CCACAAGCACAGACTCGCCCACATCACCAACCACGG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCATGAGGTAGTGGGCTaGGAGGGTCGGATAGGGTTC +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATHEVVG*EGRIGF
Trigger: GAACCCTATCCGACCCTCCCAGCCCACTACCTCATG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGGGCAGGTCTCCAGGTaGTGGCTTTTGTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATGQVSR*WLLWQL
Trigger: GAGTTGCCACAAAAGCCACCACCTGGAGACCTGCCC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAGGGTAAGTCTGAGAGTTaGGGTTTGGGTGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TVFLQLCSRVVKLDVVGEGKSES*GLGGRS
Trigger: GGACCTGCCACCCAAACCCCAACTCTCAGACTTACC...CTCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCTCCCAGCTGTGGTTTaGGGGGCAGGTCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLPAVV*GAGPSS
Trigger: AGATGAAGGACCTGCCCCCCAAACCACAGCTGGGAG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCATCCGGACACTGGTGTaGCTTCAGTACCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATIRTLV*LQYRGC
Trigger: GCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGAT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR CAA 72 bp GGGCAGTTCTCCTGGCTTAGGCGGCAAATCTCCAATTaGGGGCTTGGGGGCCAGTTCTGTGGGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GQFSWLRRQISN*GLGGQFCGLWG
Trigger: CCCCCAAAGCCCACAGAACTGGCCCCCAAGCCCCAAATTGGAGATTTGCCGCCTAAGCCAGGAGAACTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGTTCGGACGGCAAGGTaGAGGGCTGTCTCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRVRTAR*RAVSPS
Trigger: GCTTGGGGAGACAGCCCTTCACCTTGCCGTCCGAAC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTTGCTGAGCCTTGGGTaGGACATCTCCAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLLSLG*DISSLG
Trigger: TCCCAGACTGGAGATGTCTCACCCAAGGCTCAGCAA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAGCTCTCGACGAAAAACTaGAGAGCCTGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TVFLQLCSRVVKLDVVGELSTKN*RAWRLK
Trigger: CTTCAGCCTCCAGGCTCTCCAGTTTTTCGTCGAGAG...CTCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTGGAGTGCTGAATCCTaGCAGTGCCAGCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATWSAES*QCQLVL
Trigger: CAGGACAAGCTGGCACTGCCAGGATTCAGCACTCCA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGGGAGGGGGAGCCTCCGTaGTTGGTGATGTGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: GRTLGPRAVFAELVLDCWEGEPP*LVMWAS
Trigger: ACTCGCCCACATCACCAACCACGGAGGCTCCCCCTC...CCAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGAGCCTCCGTGGTTGGTaGTGTGGGCGAGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRSLRGW*CGRVCA
Trigger: AGCACAGACTCGCCCACATCACCAACCACGGAGGCT...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp CGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCTACCCTCATACTGGTaGAGGCAGAAAACCACAGGA +
Preference number: 4 (lower is better)
Translates to: RDGVPAVVQPRGEAGRGGLPSYW*RQKTTG
Trigger: TCCTGTGGTTTTCTGCCTTCACCAGTATGAGGGTAG...CCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGAACACTTCCTCCTCTaGCATACTTTCCGGATCCCG +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATEHFLL*HTFRIP
Trigger: CGGGATCCGGAAAGTATGGCAGAGGAGGAAGTGTTC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGTCTCCCCAAGCTCCTaGCCAGGTTCCAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRVSPSS*PGSSSG
Trigger: ACCACTGCTGGAACCTGGGCAGGAGCTTGGGGAGAC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGAGAGATGTCTGATCTaGAGTTCGGACGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATERCLI*SSDGKV
Trigger: CACCTTGCCGTCCGAACTGCAGATCAGACATCTCTC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCTGAGCAACCTCAGATaGAGACTTCCATCCGGACAC +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLSNLR*RLPSGH
Trigger: GTGTCCGGATGGAAGTCTGCATCTGAGGTTGCTCAG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCTCTCGACGAAAAACTaGAGAGCCTGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLSTKN*RAWRLK
Trigger: CTTCAGCCTCCAGGCTCTCCAGTTTTTCGTCGAGAG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTTCCCTGGGAGCCGCTaGACATCCTCAATAATGGCT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATFPGSR*TSSIMA
Trigger: AGCCATTATTGAGGATGTCCAGCGGCTCCCAGGGAA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGAGTGCCAGCTTGTCCTaGGGGGAGATGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRSASLS*GEMLEE
Trigger: CTCCTCCAGCATCTCCCCCCAGGACAAGCTGGCACT...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCTGCCACTAGAGGTCTaGGTGCTTAGAGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLPLEV*VLRGSV
Trigger: AACACTCCCTCTAAGCACCCAGACCTCTAGTGGCAG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACCTTGTGTCCGGGTGGTaGGGGAGGAGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNLVSGW*GRRPLL
Trigger: AAGAAGAGGCCTCCTCCCCCACCACCCGGACACAAG...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGCTTGTGTCCGGGTGGTaGGGGAGGAGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRLVSGW*GRRPLL
Trigger: AAGAAGAGGCCTCCTCCCCCACCACCCGGACACAAG...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCAGATTTCGGGCGGGATaGTGGCTTTGTCTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATRFRAG*WLCLGR
Trigger: TCTCCCTAGACAAAGCCACCATCCCGCCCGAAATCT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GTTCTATCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGCCCCCAGCTGTGGTTTaGGGGGCAGTTCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VLSWSRASSSSVTVFLQLPPAVV*GAVLLA
Trigger: AGCCAGGAGAACTGCCCCCCAAACCACAGCTGGGGG...CAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGATAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCAGGGTTGCTGAGCCTTaGGTGAGACATCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATRVAEP*VRHLQS
Trigger: AGACTGGAGATGTCTCACCCAAGGCTCAGCAACCCT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTCCGAGACAGAGATCTaGTCCGGCATCCGATTCCAT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATSETEI*SGIRFH
Trigger: ATGGAATCGGATGCCGGACCAGATCTCTGTCTCGGA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518721.6
CDS-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKCAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR TCA 90 bp GTTCTATCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGCCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: VLSWSRASSSSVTVFLQLPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...CAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGATAGAAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCAAATGGAGAGATGTCTaGTCTGCAGTTCGGACGGCA +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATKWRDV*SAVRTA
Trigger: TGCCGTCCGAACTGCAGATCAGACATCTCTCCATTT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCAGTGGGCTTGCTCCTaGGCAAAAGCTTCAAACACT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATQWACS*AKASNT
Trigger: AGTGTTTGAAGCTTTTGCTCAGGAGCAAGCCCACTG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTGTCCCTTGGAGTGCTaGATCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNCPLEC*ILAVPA
Trigger: AGCTGGCACTGCCAGGATTCAGCACTCCAAGGGACA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTGTCCCTTGGAGTGCTaGATCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRCPLEC*ILAVPA
Trigger: AGCTGGCACTGCCAGGATTCAGCACTCCAAGGGACA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRVFLQL*SRVVKL
Trigger: CAGCTTCACCACGCGGCTGCACAACTGCAGGAACAC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGAGGAGGCCTCTTCTTaGATAGGGTGGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPREEASS*IGWSCH
Trigger: GTGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGGGCAGGTCTCCAGGTaGTGGCTTTTGTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRGQVSR*WLLWQL
Trigger: GAGTTGCCACAAAAGCCACCACCTGGAGACCTGCCC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CAGCGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTTCAGATGCTTGCTTTTaGATGGCGTCTCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: QRDGVPAVVQPRGEAGRGSDACF*MASLDC
Trigger: GCAGTCCAGAGACGCCATCCAAAAGCAAGCATCTGA...ACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp AGGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGGGAGAGCCTGGAGGCTaGAGATCTCATGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RKNSWAKGSLCRTGARLLGEPGG*RSHVSA
Trigger: GGCTGAGACATGAGATCTTCAGCCTCCAGGCTCTCC...CAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp CAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCCTCCTCCATGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: QTSSLSEGLFYLGLEPPPCAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...TGGAGGAGGCTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR TCA 90 bp ACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAGGTTAGATGTGGCATGTaGGATGGTCAGAATCCCATT +
Preference number: 4 (lower is better)
Translates to: TVFLQLCSRVVKLDVVGEVRCGM*DGQNPI
Trigger: AATGGGATTCTGACCATCTCACATGCCACATCTAAC...CTCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGCGAAGATCTGGTTGGTaGAGGCTCCATAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRRRSGW*RLHRRA
Trigger: GGCTCTCCTATGGAGCCTTCACCAACCAGATCTTCG...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGGCGAAGATCTGGTTGGTaGAGGCTCCATAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GRTLGPRAVFAELVLDCWRRSGW*RLHRRA
Trigger: GGCTCTCCTATGGAGCCTTCACCAACCAGATCTTCG...CCAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGTGCCCAGGGTTACATaGAGGCAGCAGTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRVPRVT*RQQSCM
Trigger: CATGCAAGACTGCTGCCTTCATGTAACCCTGGGCAC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GTTCTATCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VLSWSRASSSSVTVFLQLVFLQL*SRVVKL
Trigger: CAGCTTCACCACGCGGCTGCACAACTGCAGGAACAC...CAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGATAGAAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR GCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTTTCCCAGGGCCGTCTaGTTATCCAGGTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRFPRAV*LSRFPQ
Trigger: CTGTGGGAACCTGGATAAGCAGACGGCCCTGGGAAA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGCCAAGGGCAGTCTTTaGAGAACTGGTGCTCGACTG +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNAKGSL*RTGARL
Trigger: CAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGAGTCTTCAGATGCTTaGTTTTGGATGGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATESSDA*FWMASL
Trigger: CAGAGACGCCATCCAAAAGCAAGCATCTGAAGACTC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp CAGCGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGTGGAAATTCACATGTaGCCTGACACTGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QRDGVPAVVQPRGEAGRGVEIHM*PDTEEA
Trigger: TGCTTCCTCAGTGTCAGGGCACATGTGAATTTCCAC...ACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAGAAAAACTGGAGAGCCTaGAGGCTGAAGATCTCATGT +
Preference number: 4 (lower is better)
Translates to: TVFLQLCSRVVKLDVVGEKNWRA*RLKISC
Trigger: ACATGAGATCTTCAGCCTCCAGGCTCTCCAGTTTTT...CTCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACCTCCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNLHGRP*LGPLLC
Trigger: GCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGAG...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGCAAATGTCATTCCCTaGGAGCCGCTGGACATCCTC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRANVIP*EPLDIL
Trigger: GAGGATGTCCAGCGGCTCCCAGGGAATGACATTTGC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGCAAATGTCATTCCCTaGGAGCCGCTGGACATCCTC +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNANVIP*EPLDIL
Trigger: GAGGATGTCCAGCGGCTCCCAGGGAATGACATTTGC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTGGAGTGCTGAATCCTaGCAGTGCCAGCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRWSAES*QCQLVL
Trigger: CAGGACAAGCTGGCACTGCCAGGATTCAGCACTCCA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GTTCTATCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGCATGAGGTAGTGGGCTaGGAGGGTCGGATAGGGTTC +
Preference number: 4 (lower is better)
Translates to: VLSWSRASSSSVTVFLQLHEVVG*EGRIGF
Trigger: GAACCCTATCCGACCCTCCCAGCCCACTACCTCATG...CAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGATAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTTTAGGAAGAACTCTTaGGCCAAGGGCAGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATFRKNS*AKGSLC
Trigger: GCAAAGACTGCCCTTGGCCCAAGAGTTCTTCCTAAA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACCAGGTCTCCAGGTGGTaGCTTTTGTGGCAACTCTGC +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNQVSRW*LLWQLC
Trigger: GCAGAGTTGCCACAAAAGCCACCACCTGGAGACCTG...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTGGGGGCCAGTTCTGTaGGCTTTGGGGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVWGPVL*ALGAGL
Trigger: GAGACCTGCCCCCAAAGCCCACAGAACTGGCCCCCA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGATTTTTCTGGGCAGTaGTACGGGCGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRDFSGQ*YGRLWQ
Trigger: CTGCCAGAGACGCCCGTACCACTGCCCAGAAAAATC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TGGTACGGGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCATCCCCCTCCTGAGGTaGCCCTTCCATGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: WYGRLWQSRREVVGVFRCIPLLR*PFHEFL
Trigger: AAGAAACTCATGGAAGGGCCACCTCAGGAGGGGGAT...GCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCCCGTACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCACCCAGCATGTCAACTaGTTCCTCATGCTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATTQHVN*FLMLCL
Trigger: CAAACAGAGCATGAGGAACCAGTTGACATGCTGGGT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACCTTCCATCCGGACACTaGTGTGGCTTCAGTACCGAG +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNLPSGH*CGFSTE
Trigger: CTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAG...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR CAA 72 bp GGTACGGGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTaGGAGTCTTCAGATGCTTGCTTTTGGATGGCGTCT +
Preference number: 4 (lower is better)
Translates to: GTGVSGRVGVRS*ESSDACFWMAS
Trigger: AGACGCCATCCAAAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCCCGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGTTCGGACGGCAAGGTaGAGGGCTGTCTCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKVRTAR*RAVSPS
Trigger: GCTTGGGGAGACAGCCCTTCACCTTGCCGTCCGAAC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp TGGTACGGGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCCAGTGGGCTTGCTCCTaGGCAAAAGCTTCAAACACT +
Preference number: 4 (lower is better)
Translates to: WYGRLWQSRREVVGVFRCQWACS*AKASNT
Trigger: AGTGTTTGAAGCTTTTGCTCAGGAGCAAGCCCACTG...GCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCCCGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGAGTGGCAGAAGCTCTaGGGTCTGGGTGAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVEWQKL*GLGERS
Trigger: AGAGCGCTCACCCAGACCTCAGAGCTTCTGCCACTC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGATTATATCCCCCTCCTaGGGTGGCCCTTCCATGAGT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRIISPS*GGPSMS
Trigger: ACTCATGGAAGGGCCACCTCAGGAGGGGGATATAAT...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCTCCTGTTATCTCTGTaGGGATCATCCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLLLSL*GSSHVV
Trigger: AACAACATGGGATGATCCGCACAGAGATAACAGGAG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp CGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGACCCCTTCTTTTCACTaGCATATTCCTTATTGCCCT +
Preference number: 4 (lower is better)
Translates to: RDGVPAVVQPRGEAGRGGTPSFH*HIPYCP
Trigger: AGGGCAATAAGGAATATGGCAGTGAAAAGAAGGGGT...CCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTTCAACTTGGCTGGTTaGCTGTTAGATGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATFNLAG*LLDVAC
Trigger: ACATGCCACATCTAACAGGCAACCAGCCAAGTTGAA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGAGAGATGTCTGATCTaGAGTTCGGACGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRERCLI*SSDGKV
Trigger: CACCTTGCCGTCCGAACTGCAGATCAGACATCTCTC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCAAAAACTGGAGAGCCTaGAGGCTGAAGATCTCATGT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATKNWRA*RLKISC
Trigger: ACATGAGATCTTCAGCCTCCAGGCTCTCCAGTTTTT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGCTCTCGACGAAAAACTaGAGAGCCTGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRLSTKN*RAWRLK
Trigger: CTTCAGCCTCCAGGCTCTCCAGTTTTTCGTCGAGAG...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACCTCTCGACGAAAAACTaGAGAGCCTGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNLSTKN*RAWRLK
Trigger: CTTCAGCCTCCAGGCTCTCCAGTTTTTCGTCGAGAG...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CCA 90 bp CGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: RDGVPAVVQPRGEAGRGGPGFVK*LLEISF
Trigger: AAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGG...CCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTTCCCTGGGAGCCGCTaGACATCCTCAATAATGGCT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRFPGSR*TSSIMA
Trigger: AGCCATTATTGAGGATGTCCAGCGGCTCCCAGGGAA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTTCCCTGGGAGCCGCTaGACATCCTCAATAATGGCT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNFPGSR*TSSIMA
Trigger: AGCCATTATTGAGGATGTCCAGCGGCTCCCAGGGAA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAGACCCCCATTTCCCTATaGATGCCAGAACATTCTATA +
Preference number: 4 (lower is better)
Translates to: TVFLQLCSRVVKLDVVGETPISL*MPEHSI
Trigger: TATAGAATGTTCTGGCATCCATAGGGAAATGGGGGT...CTCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp CAGCGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGCAGTTTCTCCAGCCTaGTTAACTATATCCACAGTG +
Preference number: 4 (lower is better)
Translates to: QRDGVPAVVQPRGEAGRGAVSPA*LTISTV
Trigger: CACTGTGGATATAGTTAACCAGGCTGGAGAAACTGC...ACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGCAGTTTCTCCAGCCTaGTTAACTATATCCACAGTG +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATAVSPA*LTISTV
Trigger: CACTGTGGATATAGTTAACCAGGCTGGAGAAACTGC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACAGATTTCGGGCGGGATaGTGGCTTTGTCTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNRFRAG*WLCLGR
Trigger: TCTCCCTAGACAAAGCCACCATCCCGCCCGAAATCT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCAGTTCTGTGGGCTTTaGGGGCAGGTCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVQFCGL*GQVSRW
Trigger: CCACCTGGAGACCTGCCCCCAAAGCCCACAGAACTG...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGGCAAATCTCCAATTTaGGGCTTGGGGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNGKSPI*GLGASS
Trigger: AGAACTGGCCCCCAAGCCCCAAATTGGAGATTTGCC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACCCCCAGCTGTGGTTTaGGGGGCAGTTCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKPPAVV*GAVLLA
Trigger: AGCCAGGAGAACTGCCCCCCAAACCACAGCTGGGGG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGAGGGTTGCTGAGCCTTaGGTGAGACATCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRRVAEP*VRHLQS
Trigger: AGACTGGAGATGTCTCACCCAAGGCTCAGCAACCCT...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTGGTACGGGCGTCTCTaGCAGAGTAGGCGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVWYGRL*QSRREV
Trigger: GACCTCACGCCTACTCTGCCAGAGACGCCCGTACCA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGGGGAAAAGAAACACTTaGTTTCAGCACCTGGATTCT +
Preference number: 4 (lower is better)
Translates to: RDGVPAVVQPRGEAGRGGGKRNT*FQHLDS
Trigger: AGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCC...CCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTCAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR TCA 90 bp GGACAGTTCCTTTGTAAGAGTAGAAAACTTGACAAACGCGGTGCCAAGGTCGGGCCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GQFLCKSRKLDKRGAKVGPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...CCCGACCTTGGCACCGCGTTTGTCAAGTTTTCTACTCTTACAAAGGAACTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR TCA 90 bp ACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAGGTTTTCAAGCCATCTTaGAAGAAATTGCACTGTGCA +
Preference number: 4 (lower is better)
Translates to: TVFLQLCSRVVKLDVVGEVFKPS*KKLHCA
Trigger: TGCACAGTGCAATTTCTTTCAAGATGGCTTGAAAAC...CTCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp AGGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGATTATATCCCCCTCCTaGGGTGGCCCTTCCATGAGT +
Preference number: 4 (lower is better)
Translates to: RKNSWAKGSLCRTGARLLIISPS*GGPSMS
Trigger: ACTCATGGAAGGGCCACCTCAGGAGGGGGATATAAT...CAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCAACTTGGTTATGAATTaGCTTGAAGGTGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATNLVMN*LEGGQS
Trigger: GCTCTGTCCACCTTCAAGTCAATTCATAACCAAGTT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACAATGTAGTGCCAGAATaGCACATGAGCCTCGGACTC +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNNVVPE*HMSLGL
Trigger: GAGTCCGAGGCTCATGTGTCATTCTGGCACTACATT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp TGGGAGCCGCTGGACATCCTCAATAATGGCTTTTGTCAGGTCTTCCAGGCTGTTGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: WEPLDILNNGFCQVFQAVVFLQL*SRVVKL
Trigger: CAGCTTCACCACGCGGCTGCACAACTGCAGGAACAC...AACAGCCTGGAAGACCTGACAAAAGCCATTATTGAGGATGTCCAGCGGCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCATGCCTTTCAACGGTTaGTGGAGACCACTTCTATTT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATMPFNG*WRPLLF
Trigger: AAATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCAT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCACAGAGTCAATTCTATaGCTTTCAACGGTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATTESIL*LSTVAG
Trigger: TCCAGCAACCGTTGAAAGGCATAGAATTGACTCTGT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAAAAACGACCGGGACCTaGCGGGCCGCTGGGCATTAT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKKTTGT*RAAGHY
Trigger: ATAATGCCCAGCGGCCCGCCAGGTCCCGGTCGTTTT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000518721.6
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTCAAAATACCCAAGTTaGTTGAAAGCCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATSKYPS*LKARWV
Trigger: AACCCACCTGGCTTTCAACCAACTTGGGTATTTTGA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTGTTTCCTACATTCTTaGCCAGCAAGAGTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATCFLHS*PARVQK
Trigger: CTTCTGAACTCTTGCTGGCCAAGAATGTAGGAAACA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGCGAGTCTGTGCTTGTaGAAACGAAGATCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNASLCL*KRRSGW
Trigger: CCAACCAGATCTTCGTTTCCACAAGCACAGACTCGC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGAGGGGGAGCCTCCGTaGTTGGTGATGTGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPEGEPP*LVMWAS
Trigger: ACTCGCCCACATCACCAACCACGGAGGCTCCCCCTC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGAGGAGGCCTCTTCTTaGATAGGGTGGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVEEASS*IGWSCH
Trigger: GTGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTCCAATTTGGGGCTTaGGGGCCAGTTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVLQFGA*GPVLWA
Trigger: AGCCCACAGAACTGGCCCCCAAGCCCCAAATTGGAG...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTCAGATGCTTGCTTTTaGATGGCGTCTCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNSDACF*MASLDC
Trigger: GCAGTCCAGAGACGCCATCCAAAAGCAAGCATCTGA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGTGCAGCCCTGGCAGTCATAAATaGTCTTCACTCGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: SWSRASSSSVTVFLQLCSPGSHK*SSLASL
Trigger: AAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGG...GCTGCACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp TGGTACGGGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCACCCAGCATGTCAACTaGTTCCTCATGCTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: WYGRLWQSRREVVGVFRCTQHVN*FLMLCL
Trigger: CAAACAGAGCATGAGGAACCAGTTGACATGCTGGGT...GCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCCCGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGATCCGGACACTGGTGTaGCTTCAGTACCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVIRTLV*LQYRGC
Trigger: GCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGAT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGGAGAGCCTGGAGGCTaGAGATCTCATGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKGEPGG*RSHVSA
Trigger: GGCTGAGACATGAGATCTTCAGCCTCCAGGCTCTCC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCCCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGTTTTCAAGCCATCTTaGAAGAAATTGCACTGTGCA +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATVFKPS*KKLHCA
Trigger: TGCACAGTGCAATTTCTTTCAAGATGGCTTGAAAAC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp TCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGTGCAGCTCAGAATCCCATTCTTaGCTGAACACTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SWSRASSSSVTVFLQLCSSESHS*LNTSSS
Trigger: AGAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGA...GCTGCACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGCTCTGAGGTCTGGGTaGGCGCTCTTTCTTGATAGG +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVALRSG*ALFLDR
Trigger: CCTATCAAGAAAGAGCGCTCACCCAGACCTCAGAGC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCGAAGATCTGGTTGGTaGAGGCTCCATAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVRRSGW*RLHRRA
Trigger: GGCTCTCCTATGGAGCCTTCACCAACCAGATCTTCG...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGTTTGTAGTCTTACTTaGAGAGGATGGACCCCCATC +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNVCSLT*RGWTPI
Trigger: GATGGGGGTCCATCCTCTTCAAGTAAGACTACAAAC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGTTTGTAGTCTTACTTaGAGAGGATGGACCCCCATC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRVCSLT*RGWTPI
Trigger: GATGGGGGTCCATCCTCTTCAAGTAAGACTACAAAC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTTGCTGAGCCTTGGGTaGGACATCTCCAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVLLSLG*DISSLG
Trigger: TCCCAGACTGGAGATGTCTCACCCAAGGCTCAGCAA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGGCAGCAGTCTTGCATaGAGGATGTGGACAATCTTA +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRGSSLA*RMWTIL
Trigger: TAAGATTGTCCACATCCTTCATGCAAGACTGCTGCC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGAGAACTCAAATTCCTaGTGGAAAACAAAACCGAAC +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATENSNS*WKTKPN
Trigger: GTTCGGTTTTGTTTTCCATCAGGAATTTGAGTTCTC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACCTGGAGCTGATGCATaGTGTATCCTCCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKPGADA*CILLAG
Trigger: GCCGGCAAGGAGGATACAGCATGCATCAGCTCCAGG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTGCCATATTCCTTATTaGCCTGGAGCTGATGCATGC +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNCHIPY*PGADAC
Trigger: GCATGCATCAGCTCCAGGGCAATAAGGAATATGGCA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTGCCATATTCCTTATTaGCCTGGAGCTGATGCATGC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRCHIPY*PGADAC
Trigger: GCATGCATCAGCTCCAGGGCAATAAGGAATATGGCA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCATCCTGCTCATCTTCTaGCTGAAAGTGATATGTTCT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATILLIF*LKVICS
Trigger: AGAACATATCACTTTCAGGCAGAAGATGAGCAGGAT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp CAGCGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTATCCTGCTCATCTTCTaGCTGAAAGTGATATGTTCT +
Preference number: 4 (lower is better)
Translates to: QRDGVPAVVQPRGEAGRGILLIF*LKVICS
Trigger: AGAACATATCACTTTCAGGCAGAAGATGAGCAGGAT...ACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTCTCTCCCGCACTCTaGTCTCCACGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKFSPAL*SPRKAM
Trigger: CATGGCCTTCCGTGGAGAGCAGAGTGCGGGAGAGAA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGAGTCTTCAGATGCTTaGTTTTGGATGGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRESSDA*FWMASL
Trigger: CAGAGACGCCATCCAAAAGCAAGCATCTGAAGACTC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCACAATCTTAAGGTTCTaGGTTTTGCTAGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATTILRF*VLLVRQ
Trigger: CTGTCTGACTAGCAAAACGCAGAACCTTAAGATTGT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGTGGAAATTCACATGTaGCCTGACACTGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNVEIHM*PDTEEA
Trigger: TGCTTCCTCAGTGTCAGGGCACATGTGAATTTCCAC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGAAGGTTCAACTTGGCTaGTTGCCTGTTAGATGTGGC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRKVQLG*LPVRCG
Trigger: GCCACATCTAACAGGCAACCAGCCAAGTTGAACCTT...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTGGTTGAAAGCCAGGTaGGTTCTGATGAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRWLKAR*VLMSHN
Trigger: ATTGTGGCTCATCAGAACCCACCTGGCTTTCAACCA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTTCTACGTGGACGTGTaGATTGAACTTTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATFYVDV*IELSRF
Trigger: AAATCTGGAAAGTTCAATCCACACGTCCACGTAGAA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCAGTGCCAGCTTGTCCTaGGGGGAGATGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPSASLS*GEMLEE
Trigger: CTCCTCCAGCATCTCCCCCCAGGACAAGCTGGCACT...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACCGTGGTTGGTGATGTaGGCGAGTCTGTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKPWLVM*ASLCLW
Trigger: CCACAAGCACAGACTCGCCCACATCACCAACCACGG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GTTCTATCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGCAGTCTTTGCAGAACTaGTGCTCGACTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: VLSWSRASSSSVTVFLQLQSLQN*CSTAGI
Trigger: TATCCCAGCAGTCGAGCACCAGTTCTGCAAAGACTG...CAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGATAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGGGCAGGTCTCCAGGTaGTGGCTTTTGTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKGQVSR*WLLWQL
Trigger: GAGTTGCCACAAAAGCCACCACCTGGAGACCTGCCC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCCAGTTCTGTGGGCTTTaGGGGCAGGTCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPQFCGL*GQVSRW
Trigger: CCACCTGGAGACCTGCCCCCAAAGCCCACAGAACTG...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTCTGAGAGTTGGGGTTTaGGTGGCAGGTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRLRVGV*VAGPPA
Trigger: AGCTGGGGGACCTGCCACCCAAACCCCAACTCTCAG...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCCTGAGAGTTGGGGTTTaGGTGGCAGGTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPLRVGV*VAGPPA
Trigger: AGCTGGGGGACCTGCCACCCAAACCCCAACTCTCAG...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGGTAAGTCTGAGAGTTaGGGTTTGGGTGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVGKSES*GLGGRS
Trigger: GGACCTGCCACCCAAACCCCAACTCTCAGACTTACC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGAGACATCTCCAGTCTaGGATTTTGCTAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNETSPV*DFASRS
Trigger: AGACCTGCTAGCAAAATCCCAGACTGGAGATGTCTC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTTTGGATGGCGTCTCTaGACTGCACATTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNFGWRL*TAHLGI
Trigger: TATCCCCAAATGTGCAGTCCAGAGACGCCATCCAAA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTTTGGATGGCGTCTCTaGACTGCACATTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRFGWRL*TAHLGI
Trigger: TATCCCCAAATGTGCAGTCCAGAGACGCCATCCAAA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACATGCTTGCTTTTGGATaGCGTCTCTGGACTGCACAT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNMLAFG*RLWTAH
Trigger: ATGTGCAGTCCAGAGACGCCATCCAAAAGCAAGCAT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACCCTGGCAGTCATAAATaGTCTTCACTCGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNPGSHK*SSLASL
Trigger: AAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGG...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACCAATCCACCACTCCTaGTCCTCTTCCCCTGTGACG +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKPIHHS*SSSPVT
Trigger: CGTCACAGGGGAAGAGGACCAGGAGTGGTGGATTGG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGTGCAGCCTTGGTTTCAGCACCTaGATTCTACATACAGTAGGG +
Preference number: 4 (lower is better)
Translates to: SWSRASSSSVTVFLQLCSLGFST*ILHTVG
Trigger: CCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAG...GCTGCACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGCTTTTCCTAAGGGTTaGGTTGGGAGTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRAFPKG*VGSCAS
Trigger: AGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGTGCAGCATGCTCTGTTTGGTGTaGAAATTCACATGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SWSRASSSSVTVFLQLCSMLCLV*KFTCAL
Trigger: CAGGGCACATGTGAATTTCCACACCAAACAGAGCAT...GCTGCACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CAA 72 bp CAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCTaGCTTTTGGATGGCGTCTCTGGACTGCACATTTGG +
Preference number: 4 (lower is better)
Translates to: QSRREVVGVFRC*LLDGVSGLHIW
Trigger: CCAAATGTGCAGTCCAGAGACGCCATCCAAAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGGAGAGCCTGGAGGCTaGAGATCTCATGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPGEPGG*RSHVSA
Trigger: GGCTGAGACATGAGATCTTCAGCCTCCAGGCTCTCC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR TCA 90 bp CAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCCTCCTCCACGGTGGTCTCGGCGATaGACTCCGAGACAGAGATCT +
Preference number: 4 (lower is better)
Translates to: QTSSLSEGLFYLGLEPPPRWSRR*TPRQRS
Trigger: AGATCTCTGTCTCGGAGTTCATCGCCGAGACCACCG...TGGAGGAGGCTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR TCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTCAGAATCCCATTCTTaGCTGAACACTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNSESHS*LNTSSS
Trigger: AGAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGTTCGGACGGCAAGGTaGAGGGCTGTCTCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTVRTAR*RAVSPS
Trigger: GCTTGGGGAGACAGCCCTTCACCTTGCCGTCCGAAC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTGTCCCTTGGAGTGCTaGATCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPCPLEC*ILAVPA
Trigger: AGCTGGCACTGCCAGGATTCAGCACTCCAAGGGACA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTTGTCTAGGGAGAGATaGTCTGTTTTCCTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRLSRER*SVFLSA
Trigger: GGCACTAAGGAAAACAGATCATCTCTCCCTAGACAA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTGCTGAGCCTTGGGTaGGACATCTCCAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKLLSLG*DISSLG
Trigger: TCCCAGACTGGAGATGTCTCACCCAAGGCTCAGCAA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTCAAAAACTTGGTTATaGATTGACTTGAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATSKTWL*IDLKVD
Trigger: GTCCACCTTCAAGTCAATTCATAACCAAGTTTTTGA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTCAGTGAAAACCATCTaGACCTCTCATTTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATSVKTI*TSHFLK
Trigger: TTTGAGAAAATGAGAGGTGCAGATGGTTTTCACTGA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000521075.5
CDS-3UTR GCA 90 bp ACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAGTTAAATTTGAAACCATaGCTCAGTGAAAACCATCTG +
Preference number: 4 (lower is better)
Translates to: TVFLQLCSRVVKLDVVGELNLKP*LSENHL
Trigger: CAGATGGTTTTCACTGAGGCATGGTTTCAAATTTAA...CTCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTACTTTATAAGATTCTaGAGCAGATCCACACCCTTT +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATYFIRF*SRSTPF
Trigger: AAAGGGTGTGGATCTGCTGCAGAATCTTATAAAGTA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTTCAACTTGGCTGGTTaGCTGTTAGATGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNFNLAG*LLDVAC
Trigger: ACATGCCACATCTAACAGGCAACCAGCCAAGTTGAA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTTCCCAGGGCCGTCTaGTTATCCAGGTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKFPRAV*LSRFPQ
Trigger: CTGTGGGAACCTGGATAAGCAGACGGCCCTGGGAAA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGAACTGGTGCTCGACTaGTGGGATAGTCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVELVLD*WDSPSN
Trigger: GTTTGAGGGACTATCCCAGCAGTCGAGCACCAGTTC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTTGTGGCTCAAACCCTaGAGCAGATTTTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRLWLKP*SRFFSS
Trigger: ACTGCTGAAAAATCTGCTCCAGGGTTTGAGCCACAA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACTCCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKLHGRP*LGPLLC
Trigger: GCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGAG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTTCCCTGGGAGCCGCTaGACATCCTCAATAATGGCT +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVFPGSR*TSSIMA
Trigger: AGCCATTATTGAGGATGTCCAGCGGCTCCCAGGGAA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGAGGGGGAGCCTCCGTaGTTGGTGATGTGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTEGEPP*LVMWAS
Trigger: ACTCGCCCACATCACCAACCACGGAGGCTCCCCCTC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTGGTGCTCGACTGCTaGGATAGTCCCTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVLVLDC*DSPSNL
Trigger: CAAGTTTGAGGGACTATCCCAGCAGTCGAGCACCAG...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTTTCGGGCGGGATGGTaGCTTTGTCTAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVFRAGW*LCLGRD
Trigger: ATCTCTCCCTAGACAAAGCCACCATCCCGCCCGAAA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACAGGTCTCCAGGTGGTaGCTTTTGTGGCAACTCTGC +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKQVSRW*LLWQLC
Trigger: GCAGAGTTGCCACAAAAGCCACCACCTGGAGACCTG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCTTTGTAAGAGTAGAAAACTTGACAAACGCGGTGCCAAGGTCGGGGTTGTCTCTCCAATTTGGGGCTTaGGGGCCAGTTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SFVRVENLTNAVPRSGLSLQFGA*GPVLWA
Trigger: AGCCCACAGAACTGGCCCCCAAGCCCCAAATTGGAG...AGACAACCCCGACCTTGGCACCGCGTTTGTCAAGTTTTCTACTCTTACAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGGCAAATCTCCAATTTaGGGCTTGGGGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVGKSPI*GLGASS
Trigger: AGAACTGGCCCCCAAGCCCCAAATTGGAGATTTGCC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACCCTTCATCTGTGGTTTaGGAGGTAAGTCTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNPSSVV*EVSLRV
Trigger: AACTCTCAGACTTACCTCCCAAACCACAGATGAAGG...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATGGTCAGAATCCCATTCTTGACTGAACACTTCCTCCTCTGCCATACTTTCCGGCTCCCAGCTGTGGTTTaGGGGGCAGGTCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: MVRIPFLTEHFLLCHTFRLPAVV*GAGPSS
Trigger: AGATGAAGGACCTGCCCCCCAAACCACAGCTGGGAG...CCGGAAAGTATGGCAGAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCCCAATCCACCACTCCTaGTCCTCTTCCCCTGTGACG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPPIHHS*SSSPVT
Trigger: CGTCACAGGGGAAGAGGACCAGGAGTGGTGGATTGG...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTCCAATCCACCACTCCTaGTCCTCTTCCCCTGTGACG +
Preference number: 4 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRPIHHS*SSSPVT
Trigger: CGTCACAGGGGAAGAGGACCAGGAGTGGTGGATTGG...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGGATGAACAAAGGACACTaGAAAGACCCCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GRTLGPRAVFAELVLDCWMNKGH*KDPLPF
Trigger: GAAAGGAAGGGGGTCTTTCCAGTGTCCTTTGTTCAT...CCAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACATGAACAAAGGACACTaGAAAGACCCCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNMNKGH*KDPLPF
Trigger: GAAAGGAAGGGGGTCTTTCCAGTGTCCTTTGTTCAT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGATCCCCCTCCTGAGGTaGCCCTTCCATGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVIPLLR*PFHEFL
Trigger: AAGAAACTCATGGAAGGGCCACCTCAGGAGGGGGAT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp CAGAACATTCTATACAGGTCAAAATACCCAAGTTGGTTGAAAGCCAGGTGGGTTGTTCGGACGGCAAGGTaGAGGGCTGTCTCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: QNILYRSKYPSWLKARWVVRTAR*RAVSPS
Trigger: GCTTGGGGAGACAGCCCTTCACCTTGCCGTCCGAAC...AACCCACCTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGCTCTGAGGTCTGGGTaGGCGCTCTTTCTTGATAGG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPALRSG*ALFLDR
Trigger: CCTATCAAGAAAGAGCGCTCACCCAGACCTCAGAGC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCCGAAGATCTGGTTGGTaGAGGCTCCATAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPRRSGW*RLHRRA
Trigger: GGCTCTCCTATGGAGCCTTCACCAACCAGATCTTCG...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGCTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRLSATF*GSLGRT
Trigger: AGTTCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGAACTTGGTTATGAATTaGCTTGAAGGTGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRNLVMN*LEGGQS
Trigger: GCTCTGTCCACCTTCAAGTCAATTCATAACCAAGTT...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGTTAAAATGTGTAAATaGATGACCGGGACACTGAGC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRVKMCK*MTGTLS
Trigger: GCTCAGTGTCCCGGTCATTCATTTACACATTTTAAC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACACCCCTTCTTTTCACTaGCATATTCCTTATTGCCCT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNTPSFH*HIPYCP
Trigger: AGGGCAATAAGGAATATGGCAGTGAAAAGAAGGGGT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGAACACTTCCTCCTCTaGCATACTTTCCGGATCCCG +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKEHFLL*HTFRIP
Trigger: CGGGATCCGGAAAGTATGGCAGAGGAGGAAGTGTTC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTTAGGGCCTCTTCTTTaGTATTTGTCAATACTGATA +
Preference number: 4 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLGPLL*YLSILI
Trigger: TATCAGTATTGACAAATAGCAAAGAAGAGGCCCTAA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp TCCTTTGTAAGAGTAGAAAACTTGACAAACGCGGTGCCAAGGTCGGGGTTGTCTTTTCCCAGGGCCGTCTaGTTATCCAGGTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: SFVRVENLTNAVPRSGLSFPRAV*LSRFPQ
Trigger: CTGTGGGAACCTGGATAAGCAGACGGCCCTGGGAAA...AGACAACCCCGACCTTGGCACCGCGTTTGTCAAGTTTTCTACTCTTACAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp GTTCTATCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGGATGTAAGTGCTAGATaGCAAGGATGGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VLSWSRASSSSVTVFLQLDVSAR*QGWLWQ
Trigger: TTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC...CAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGATAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCTCGCGGCTCTCGGGTaGGAAAGCGAACTGCGACCG +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLAALG*ESELRP
Trigger: CGGTCGCAGTTCGCTTTCCCACCCGAGAGCCGCGAG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000518721.6
CDS-3UTR CCA 90 bp TTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGGACCTGGCGGGCCGCTaGGCATTATTCCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: LLLQTSSLSEGLFYLGLEDLAGR*ALFHRG
Trigger: CCCGCGATGGAATAATGCCCAGCGGCCCGCCAGGTC...CTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524299.1
CDS-3UTR CCA 90 bp GGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGGCCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GRTLGPRAVFAELVLDCWPGFVK*LLEISF
Trigger: AAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGG...CCAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACACCCCCATTTCCCTATaGATGCCAGAACATTCTATA +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNTPISL*MPEHSI
Trigger: TATAGAATGTTCTGGCATCCATAGGGAAATGGGGGT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGTGCAGCCACTCATATTCTACGTaGACGTGTGGATTGAACTTT +
Preference number: 4 (lower is better)
Translates to: SWSRASSSSVTVFLQLCSHSYST*TCGLNF
Trigger: AAAGTTCAATCCACACGTCCACGTAGAATATGAGTG...GCTGCACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGCGAGTCTGTGCTTGTaGAAACGAAGATCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVASLCL*KRRSGW
Trigger: CCAACCAGATCTTCGTTTCCACAAGCACAGACTCGC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTTCGGGCGGGATGGTaGCTTTGTCTAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKFRAGW*LCLGRD
Trigger: ATCTCTCCCTAGACAAAGCCACCATCCCGCCCGAAA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGAGCAGATTTTTCAGCAGGGGCAGGTCTCCAGGTaGTGGCTTTTGTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: IQGEDHIVAQTLEQIFQQGQVSR*WLLWQL
Trigger: GAGTTGCCACAAAAGCCACCACCTGGAGACCTGCCC...CTGCTGAAAAATCTGCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp CAGAACATTCTATACAGGTCAAAATACCCAAGTTGGTTGAAAGCCAGGTGGGTTTGGGGGCCAGTTCTGTaGGCTTTGGGGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QNILYRSKYPSWLKARWVWGPVL*ALGAGL
Trigger: GAGACCTGCCCCCAAAGCCCACAGAACTGGCCCCCA...AACCCACCTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGGTAAGTCTGAGAGTTaGGGTTTGGGTGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPGKSES*GLGGRS
Trigger: GGACCTGCCACCCAAACCCCAACTCTCAGACTTACC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TGTGGATTGAACTTTCCAGATTTAGCCTGGGAAAGCAGATCTTCACACTGGGTATGGTACGGGCGTCTCTaGCAGAGTAGGCGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: CGLNFPDLAWESRSSHWVWYGRL*QSRREV
Trigger: GACCTCACGCCTACTCTGCCAGAGACGCCCGTACCA...TACCCAGTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAAGTTCAATCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGATTTTTCTGGGCAGTaGTACGGGCGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPDFSGQ*YGRLWQ
Trigger: CTGCCAGAGACGCCCGTACCACTGCCCAGAAAAATC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTGCCAAGGATGGCTTTaGCAAACCAGTAAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPCQGWL*QTSKAR
Trigger: GCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGGGAAAAGAAACACTTaGTTTCAGCACCTGGATTCT +
Preference number: 4 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNGKRNT*FQHLDS
Trigger: AGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACACGGTGGTCTCGGCGATaGACTCCGAGACAGAGATCT +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTRWSRR*TPRQRS
Trigger: AGATCTCTGTCTCGGAGTTCATCGCCGAGACCACCG...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR TCA 90 bp CAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGAGCAGATTTTTCCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: QRIQGEDHIVAQTLEQIFPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...AAAAATCTGCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGTTTTCAAGCCATCTTaGAAGAAATTGCACTGTGCA +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRVFKPS*KKLHCA
Trigger: TGCACAGTGCAATTTCTTTCAAGATGGCTTGAAAAC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTATTGCCCTGGAGCTaGTGCATGCTGTATCCTCCT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKLLPWS*CMLYPP
Trigger: AGGAGGATACAGCATGCATCAGCTCCAGGGCAATAA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGTTTGTAGTCTTACTTaGAGAGGATGGACCCCCATC +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVVCSLT*RGWTPI
Trigger: GATGGGGGTCCATCCTCTTCAAGTAAGACTACAAAC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCTTGCTTTCTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: GVSGRVGVRSLESSDACFLSATF*GSLGRT
Trigger: AGTTCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...AAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp TGGGAGCCGCTGGACATCCTCAATAATGGCTTTTGTCAGGTCTTCCAGGCTGTTGAGGTGGCCCTTCCATaGGTTTCTTACTCTGTAACA +
Preference number: 4 (lower is better)
Translates to: WEPLDILNNGFCQVFQAVEVALP*VSYSVT
Trigger: TGTTACAGAGTAAGAAACTCATGGAAGGGCCACCTC...AACAGCCTGGAAGACCTGACAAAAGCCATTATTGAGGATGTCCAGCGGCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGATGCTTCAACACATCTaGGAGATGTGCATTCATAAC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRMLQHI*EMCIHN
Trigger: GTTATGAATGCACATCTCTCAGATGTGTTGAAGCAT...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp TGGGAGCCGCTGGACATCCTCAATAATGGCTTTTGTCAGGTCTTCCAGGCTGTTTGCCATATTCCTTATTaGCCTGGAGCTGATGCATGC +
Preference number: 4 (lower is better)
Translates to: WEPLDILNNGFCQVFQAVCHIPY*PGADAC
Trigger: GCATGCATCAGCTCCAGGGCAATAAGGAATATGGCA...AACAGCCTGGAAGACCTGACAAAAGCCATTATTGAGGATGTCCAGCGGCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGAACACTTCCTCCTCTaGCATACTTTCCGGATCCCG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPEHFLL*HTFRIP
Trigger: CGGGATCCGGAAAGTATGGCAGAGGAGGAAGTGTTC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATTCTCTCCCGCACTCTaGTCTCCACGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTFSPAL*SPRKAM
Trigger: CATGGCCTTCCGTGGAGAGCAGAGTGCGGGAGAGAA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTGAGAGATGTCTGATCTaGAGTTCGGACGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRERCLI*SSDGKV
Trigger: CACCTTGCCGTCCGAACTGCAGATCAGACATCTCTC...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGAACTGGTGCTCGACTaGTGGGATAGTCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPELVLD*WDSPSN
Trigger: GTTTGAGGGACTATCCCAGCAGTCGAGCACCAGTTC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGTTGGAGTCTTCAGATaGTTGCTTTTGGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVVGVFR*LLLDGV
Trigger: GACGCCATCCAAAAGCAAGCATCTGAAGACTCCAAC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGACAATCTTAAGGTTCTaGGTTTTGCTAGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRTILRF*VLLVRQ
Trigger: CTGTCTGACTAGCAAAACGCAGAACCTTAAGATTGT...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGAGCAGATCTTCACACTaGGTAGCTTTTAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRSRSSH*VAFSLF
Trigger: AAAGAGACTAAAAGCTACCCAGTGTGAAGATCTGCT...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGCACTCATATTCTACGTaGACGTGTGGATTGAACTTT +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRHSYST*TCGLNF
Trigger: AAAGTTCAATCCACACGTCCACGTAGAATATGAGTG...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TCTCCTTTTAACAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGAGTGCCAGCTTGTCCTaGGGGGAGATGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SPFNKESKVKITLWLKPWSASLS*GEMLEE
Trigger: CTCCTCCAGCATCTCCCCCCAGGACAAGCTGGCACT...CCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCCTGCCACTAGAGGTCTaGGTGCTTAGAGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPLPLEV*VLRGSV
Trigger: AACACTCCCTCTAAGCACCCAGACCTCTAGTGGCAG...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCCTGGTGCTCGACTGCTaGGATAGTCCCTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPLVLDC*DSPSNL
Trigger: CAAGTTTGAGGGACTATCCCAGCAGTCGAGCACCAG...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATGGTCAGAATCCCATTCTTGACTGAACACTTCCTCCTCTGCCATACTTTCCGGTTTCGGGCGGGATGGTaGCTTTGTCTAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: MVRIPFLTEHFLLCHTFRFRAGW*LCLGRD
Trigger: ATCTCTCCCTAGACAAAGCCACCATCCCGCCCGAAA...CCGGAAAGTATGGCAGAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCAGATTTCGGGCGGGATaGTGGCTTTGTCTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPRFRAG*WLCLGR
Trigger: TCTCCCTAGACAAAGCCACCATCCCGCCCGAAATCT...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTGGGGGCCAGTTCTGTaGGCTTTGGGGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNWGPVL*ALGAGL
Trigger: GAGACCTGCCCCCAAAGCCCACAGAACTGGCCCCCA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATGGGGGCCAGTTCTGTaGGCTTTGGGGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKWGPVL*ALGAGL
Trigger: GAGACCTGCCCCCAAAGCCCACAGAACTGGCCCCCA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACACTCCAATTTGGGGCTTaGGGGCCAGTTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTLQFGA*GPVLWA
Trigger: AGCCCACAGAACTGGCCCCCAAGCCCCAAATTGGAG...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACCCCCAGCTGTGGTTTaGGGGGCAGTTCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKPPAVV*GAVLLA
Trigger: AGCCAGGAGAACTGCCCCCCAAACCACAGCTGGGGG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTAGGGTTGCTGAGCCTTaGGTGAGACATCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRRVAEP*VRHLQS
Trigger: AGACTGGAGATGTCTCACCCAAGGCTCAGCAACCCT...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCCTGGCAGTCATAAATaGTCTTCACTCGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVPGSHK*SSLASL
Trigger: AAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGG...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGCTAGATGCCAAGGATaGCTTTGGCAAACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVARCQG*LWQTSK
Trigger: CTTACTGGTTTGCCAAAGCCATCCTTGGCATCTAGC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGCTTTTCCTAAGGGTTaGGTTGGGAGTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVAFPKG*VGSCAS
Trigger: AGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR CAA 72 bp ACAACCCAGCATGTCAACTGGTTCCTCATGCTCTGTTaGGTGTGGAAATTCACATGTGCCCTGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: TTQHVNWFLMLC*VWKFTCALTLR
Trigger: CCTCAGTGTCAGGGCACATGTGAATTTCCACACCAAACAGAGCATGAGGAACCAGTTGACATGCTGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR CAA 72 bp AGCAGTGTGGACAGTTCCTTTGTAAGAGTAGAAAACTaGACAAACGCGGTGCCAAGGTCGGGGTTGTCTCGA +
Preference number: 4 (lower is better)
Translates to: SSVDSSFVRVEN*TNAVPRSGLSR
Trigger: TCGAGACAACCCCGACCTTGGCACCGCGTTTGTCAAGTTTTCTACTCTTACAAAGGAACTGTCCACACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTCACACATTTGGAGCTaGAAGAGGCGCCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPSHIWS*KRRLSF
Trigger: GAAGGAAAGGCGCCTCTTTCAGCTCCAAATGTGTGA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGTTAGATGTGGCATGTaGGATGGTCAGAATCCCATT +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVVRCGM*DGQNPI
Trigger: AATGGGATTCTGACCATCTCACATGCCACATCTAAC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCCAGTGGGCTTGCTCCTaGGCAAAAGCTTCAAACACT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPQWACS*AKASNT
Trigger: AGTGTTTGAAGCTTTTGCTCAGGAGCAAGCCCACTG...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGAGTGGCAGAAGCTCTaGGGTCTGGGTGAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNEWQKL*GLGERS
Trigger: AGAGCGCTCACCCAGACCTCAGAGCTTCTGCCACTC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp TCTCCTTTTAACAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGTGTCCCTTGGAGTGCTaGATCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPFNKESKVKITLWLKPWCPLEC*ILAVPA
Trigger: AGCTGGCACTGCCAGGATTCAGCACTCCAAGGGACA...CCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACAGCCTCCGTGGTTGGTaGTGTGGGCGAGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNSLRGW*CGRVCA
Trigger: AGCACAGACTCGCCCACATCACCAACCACGGAGGCT...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGAACTGTGATGATTTCTaGAAGATTTCGGGCGGGATG +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVNCDDF*KISGGM
Trigger: CATCCCGCCCGAAATCTTTCAGAAATCATCACAGTT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGAGGTGGCCCTTCCATaGGTTTCTTACTCTGTAACA +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKEVALP*VSYSVT
Trigger: TGTTACAGAGTAAGAAACTCATGGAAGGGCCACCTC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCCTACCCTCATACTGGTaGAGGCAGAAAACCACAGGA +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPLPSYW*RQKTTG
Trigger: TCCTGTGGTTTTCTGCCTTCACCAGTATGAGGGTAG...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTCAAAAACTTGGTTATaGATTGACTTGAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: ATSDADFHPDTGVASVPRSKTWL*IDLKVD
Trigger: GTCCACCTTCAAGTCAATTCATAACCAAGTTTTTGA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp CTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCCTGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLQTSSLSEGLFYLGLEPVFLQL*SRVVKL
Trigger: CAGCTTCACCACGCGGCTGCACAACTGCAGGAACAC...AGGCTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR GCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGTCTCCCCAAGCTCCTaGCCAGGTTCCAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKVSPSS*PGSSSG
Trigger: ACCACTGCTGGAACCTGGGCAGGAGCTTGGGGAGAC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATTTCCCAGGGCCGTCTaGTTATCCAGGTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTFPRAV*LSRFPQ
Trigger: CTGTGGGAACCTGGATAAGCAGACGGCCCTGGGAAA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGCCAAGGGCAGTCTTTaGAGAACTGGTGCTCGACTG +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTAKGSL*RTGARL
Trigger: CAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGCTATATACACACTGTaGCCAGGGTTACATGAAGGC +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKAIYTL*PGLHEG
Trigger: GCCTTCATGTAACCCTGGGCACAGTGTGTATATAGC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGATGTAAGTGCTAGATaGCAAGGATGGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVDVSAR*QGWLWQ
Trigger: TTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GTTCTATCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGTTGGGTTGGGAGTTGTaGTTCTGTGAAATTAACATC +
Preference number: 4 (lower is better)
Translates to: VLSWSRASSSSVTVFLQLLGWEL*FCEINI
Trigger: GATGTTAATTTCACAGAAGCACAACTCCCAACCCAA...CAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGATAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGTGGAAATTCACATGTaGCCTGACACTGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKVEIHM*PDTEEA
Trigger: TGCTTCCTCAGTGTCAGGGCACATGTGAATTTCCAC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAAAGGTTCAACTTGGCTaGTTGCCTGTTAGATGTGGC +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKKVQLG*LPVRCG
Trigger: GCCACATCTAACAGGCAACCAGCCAAGTTGAACCTT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGCAAATGTCATTCCCTaGGAGCCGCTGGACATCCTC +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTANVIP*EPLDIL
Trigger: GAGGATGTCCAGCGGCTCCCAGGGAATGACATTTGC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TTCATCTGTGGTTTGGGAGGTAAGTCTGAGAGTTGGGGTTTGGGTGGCAGGTCCTCAAAATACCCAAGTTaGTTGAAAGCCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: FICGLGGKSESWGLGGRSSKYPS*LKARWV
Trigger: AACCCACCTGGCTTTCAACCAACTTGGGTATTTTGA...GGACCTGCCACCCAAACCCCAACTCTCAGACTTACCTCCCAAACCACAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCTTGTGTCCGGGTGGTaGGGGAGGAGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLVSGW*GRRPLL
Trigger: AAGAAGAGGCCTCCTCCCCCACCACCCGGACACAAG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp ACTCCCTTTAGGTCTCCTTTTAACAAAGAATCCAAGGTGAAGATCACATTGTGGCTTGTGTCCGGGTGGTaGGGGAGGAGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TPFRSPFNKESKVKITLWLVSGW*GRRPLL
Trigger: AAGAAGAGGCCTCCTCCCCCACCACCCGGACACAAG...CCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGGAGACCTAAAGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTTAGGAAGAACTCTTaGGCCAAGGGCAGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKFRKNS*AKGSLC
Trigger: GCAAAGACTGCCCTTGGCCCAAGAGTTCTTCCTAAA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACAGTTCTGTGGGCTTTaGGGGCAGGTCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKQFCGL*GQVSRW
Trigger: CCACCTGGAGACCTGCCCCCAAAGCCCACAGAACTG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp AGATCTCCTTTGACTCCCTTTAGGTCTCCTTTTAACAAAGAATCCAAGGTGAAGCAGTTCTGTGGGCTTTaGGGGCAGGTCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RSPLTPFRSPFNKESKVKQFCGL*GQVSRW
Trigger: CCACCTGGAGACCTGCCCCCAAAGCCCACAGAACTG...CTTCACCTTGGATTCTTTGTTAAAAGGAGACCTAAAGGGAGTCAAAGGAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACTGAGAGTTGGGGTTTaGGTGGCAGGTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKLRVGV*VAGPPA
Trigger: AGCTGGGGGACCTGCCACCCAAACCCCAACTCTCAG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGAGACATCTCCAGTCTaGGATTTTGCTAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKETSPV*DFASRS
Trigger: AGACCTGCTAGCAAAATCCCAGACTGGAGATGTCTC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATGGTACGGGCGTCTCTaGCAGAGTAGGCGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKWYGRL*QSRREV
Trigger: GACCTCACGCCTACTCTGCCAGAGACGCCCGTACCA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACCTGGCAGTCATAAATaGTCTTCACTCGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKPGSHK*SSLASL
Trigger: AAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGATGAACAAAGGACACTaGAAAGACCCCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVMNKGH*KDPLPF
Trigger: GAAAGGAAGGGGGTCTTTCCAGTGTCCTTTGTTCAT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTGGTTTCAGCACCTaGATTCTACATACAGTAGGG +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVLGFST*ILHTVG
Trigger: CCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAG...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAACCCAGCATGTCAACTaGTTCCTCATGCTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKTQHVN*FLMLCL
Trigger: CAAACAGAGCATGAGGAACCAGTTGACATGCTGGGT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACACTTCCATCCGGACACTaGTGTGGCTTCAGTACCGAG +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTLPSGH*CGFSTE
Trigger: CTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAG...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp CTGGAGCAGATTTTTCAGCAGTGTGGACAGTTCCTTTGTAAGAGTAGAAAACTTGGAGAGCCTGGAGGCTaGAGATCTCATGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LEQIFQQCGQFLCKSRKLGEPGG*RSHVSA
Trigger: GGCTGAGACATGAGATCTTCAGCCTCCAGGCTCTCC...AAGTTTTCTACTCTTACAAAGGAACTGTCCACACTGCTGAAAAATCTGCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATCAGAATCCCATTCTTaGCTGAACACTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKSESHS*LNTSSS
Trigger: AGAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp CAGAACATTCTATACAGGTCAAAATACCCAAGTTGGTTGAAAGCCAGGTGGGTTTTGCTGAGCCTTGGGTaGGACATCTCCAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QNILYRSKYPSWLKARWVLLSLG*DISSLG
Trigger: TCCCAGACTGGAGATGTCTCACCCAAGGCTCAGCAA...AACCCACCTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp TTTTTGTCTTCGGCATTAGGTTTTACTTGGCAGGTGAGAAGGTTCAACTTGGCTGTGCCCAGGGTTACATaGAGGCAGCAGTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: FLSSALGFTWQVRRFNLAVPRVT*RQQSCM
Trigger: CATGCAAGACTGCTGCCTTCATGTAACCCTGGGCAC...AGCCAAGTTGAACCTTCTCACCTGCCAAGTAAAACCTAATGCCGAAGACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp GTTCTATCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGTCAGTGAAAACCATCTaGACCTCTCATTTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: VLSWSRASSSSVTVFLQLSVKTI*TSHFLK
Trigger: TTTGAGAAAATGAGAGGTGCAGATGGTTTTCACTGA...CAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGATAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR GCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKVFLQL*SRVVKL
Trigger: CAGCTTCACCACGCGGCTGCACAACTGCAGGAACAC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACTCCTGTTATCTCTGTaGGGATCATCCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKLLLSL*GSSHVV
Trigger: AACAACATGGGATGATCCGCACAGAGATAACAGGAG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACCTGGAGCTGATGCATaGTGTATCCTCCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKPGADA*CILLAG
Trigger: GCCGGCAAGGAGGATACAGCATGCATCAGCTCCAGG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTCAACTTGGCTGGTTaGCTGTTAGATGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKFNLAG*LLDVAC
Trigger: ACATGCCACATCTAACAGGCAACCAGCCAAGTTGAA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATTCTCTCCCGCACTCTaGTCTCCACGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKFSPAL*SPRKAM
Trigger: CATGGCCTTCCGTGGAGAGCAGAGTGCGGGAGAGAA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp CTGGAGCAGATTTTTCAGCAGTGTGGACAGTTCCTTTGTAAGAGTAGAAAACTTTTCTCTCCCGCACTCTaGTCTCCACGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: LEQIFQQCGQFLCKSRKLFSPAL*SPRKAM
Trigger: CATGGCCTTCCGTGGAGAGCAGAGTGCGGGAGAGAA...AAGTTTTCTACTCTTACAAAGGAACTGTCCACACTGCTGAAAAATCTGCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp ACAGAGATCTGGTCCGGCATCCATTTCTGGGCCATAATCCTCTTTAAATTTGAAGCCAAGGGCAGTCTTTaGAGAACTGGTGCTCGACTG +
Preference number: 4 (lower is better)
Translates to: TEIWSGIHFWAIILFKFEAKGSL*RTGARL
Trigger: CAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGC...TTCAAATTTAAAGAGGATTATGGCCCAGAAATGGATGCCGGACCAGATCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGAGTCTTCAGATGCTTaGTTTTGGATGGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPESSDA*FWMASL
Trigger: CAGAGACGCCATCCAAAAGCAAGCATCTGAAGACTC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGTGGAAATTCACATGTaGCCTGACACTGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPVEIHM*PDTEEA
Trigger: TGCTTCCTCAGTGTCAGGGCACATGTGAATTTCCAC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVPGFVK*LLEISF
Trigger: AAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGG...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTGGTTGAAAGCCAGGTaGGTTCTGATGAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPWLKAR*VLMSHN
Trigger: ATTGTGGCTCATCAGAACCCACCTGGCTTTCAACCA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTCAAAATACCCAAGTTaGTTGAAAGCCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVSKYPS*LKARWV
Trigger: AACCCACCTGGCTTTCAACCAACTTGGGTATTTTGA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TTTAATGAGATATTCACACATTTGGAGCTGAAAGAGGCGCCTTTCCTTCTCCATCCGTGGTTGGTGATGTaGGCGAGTCTGTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: FNEIFTHLELKEAPFLLHPWLVM*ASLCLW
Trigger: CCACAAGCACAGACTCGCCCACATCACCAACCACGG...ATGGAGAAGGAAAGGCGCCTCTTTCAGCTCCAAATGTGTGAATATCTCATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACACTGCCACTAGAGGTCTaGGTGCTTAGAGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTLPLEV*VLRGSV
Trigger: AACACTCCCTCTAAGCACCCAGACCTCTAGTGGCAG...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ACAATCTTAAGGTTCTGCGTTTTGCTAGTCAGACAGGATATGAACAAAGGACACGAGGAGGCCTCTTCTTaGATAGGGTGGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TILRFCVLLVRQDMNKGHEEASS*IGWSCH
Trigger: GTGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTC...GTGTCCTTTGTTCATATCCTGTCTGACTAGCAAAACGCAGAACCTTAAGATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACATGAGGTAGTGGGCTaGGAGGGTCGGATAGGGTTC +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKHEVVG*EGRIGF
Trigger: GAACCCTATCCGACCCTCCCAGCCCACTACCTCATG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCATGAGGTAGTGGGCTaGGAGGGTCGGATAGGGTTC +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNHEVVG*EGRIGF
Trigger: GAACCCTATCCGACCCTCCCAGCCCACTACCTCATG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp TGTGGATTGAACTTTCCAGATTTAGCCTGGGAAAGCAGATCTTCACACTGGGTACTGGTGCTCGACTGCTaGGATAGTCCCTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: CGLNFPDLAWESRSSHWVLVLDC*DSPSNL
Trigger: CAAGTTTGAGGGACTATCCCAGCAGTCGAGCACCAG...TACCCAGTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAAGTTCAATCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTTTAGGAAGAACTCTTaGGCCAAGGGCAGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPFRKNS*AKGSLC
Trigger: GCAAAGACTGCCCTTGGCCCAAGAGTTCTTCCTAAA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAAGATTTCGGGCGGGATaGTGGCTTTGTCTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTRFRAG*WLCLGR
Trigger: TCTCCCTAGACAAAGCCACCATCCCGCCCGAAATCT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ACAGAGATCTGGTCCGGCATCCATTTCTGGGCCATAATCCTCTTTAAATTTGAACAGGTCTCCAGGTGGTaGCTTTTGTGGCAACTCTGC +
Preference number: 4 (lower is better)
Translates to: TEIWSGIHFWAIILFKFEQVSRW*LLWQLC
Trigger: GCAGAGTTGCCACAAAAGCCACCACCTGGAGACCTG...TTCAAATTTAAAGAGGATTATGGCCCAGAAATGGATGCCGGACCAGATCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCTCCAATTTGGGGCTTaGGGGCCAGTTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLQFGA*GPVLWA
Trigger: AGCCCACAGAACTGGCCCCCAAGCCCCAAATTGGAG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACCTTCATCTGTGGTTTaGGAGGTAAGTCTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKPSSVV*EVSLRV
Trigger: AACTCTCAGACTTACCTCCCAAACCACAGATGAAGG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACTCCCAGCTGTGGTTTaGGGGGCAGGTCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKLPAVV*GAGPSS
Trigger: AGATGAAGGACCTGCCCCCCAAACCACAGCTGGGAG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGAGACATCTCCAGTCTaGGATTTTGCTAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPETSPV*DFASRS
Trigger: AGACCTGCTAGCAAAATCCCAGACTGGAGATGTCTC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGAGCAGATTTTTGATTTTTCTGGGCAGTaGTACGGGCGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QRIQGEDHIVAQTLEQIFDFSGQ*YGRLWQ
Trigger: CTGCCAGAGACGCCCGTACCACTGCCCAGAAAAATC...AAAAATCTGCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGGCTGTCCTTCGATGTaGCCAATCCACCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNGCPSM*PIHHSW
Trigger: CCAGGAGTGGTGGATTGGCCACATCGAAGGACAGCC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp TTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGGGCTGTCCTTCGATGTaGCCAATCCACCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLLQTSSLSEGLFYLGLEGCPSM*PIHHSW
Trigger: CCAGGAGTGGTGGATTGGCCACATCGAAGGACAGCC...CTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGCTAGATGCCAAGGATaGCTTTGGCAAACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPARCQG*LWQTSK
Trigger: CTTACTGGTTTGCCAAAGCCATCCTTGGCATCTAGC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTGCTTTTCCTAAGGGTTaGGTTGGGAGTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRAFPKG*VGSCAS
Trigger: AGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGC...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp TTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGATCCGGACACTGGTGTaGCTTCAGTACCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLQTSSLSEGLFYLGLEIRTLV*LQYRGC
Trigger: GCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGAT...CTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGAAACCATGCCTCAGTaGAAACCATCTGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTETMPQ*KPSAPL
Trigger: GAGAGGTGCAGATGGTTTTCACTGAGGCATGGTTTC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000521075.5
CDS-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATCACACATTTGGAGCTaGAAGAGGCGCCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTSHIWS*KRRLSF
Trigger: GAAGGAAAGGCGCCTCTTTCAGCTCCAAATGTGTGA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGTAAATCCCTGGATTTaGTGGCCTCAAGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKVNPWI*WPQAIH
Trigger: ATGAATTGCTTGAGGCCATCAAATCCAGGGATTTAC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAAAATGGAGAGATGTCTaGTCTGCAGTTCGGACGGCA +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTKWRDV*SAVRTA
Trigger: TGCCGTCCGAACTGCAGATCAGACATCTCTCCATTT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGCTCTGAGGTCTGGGTaGGCGCTCTTTCTTGATAGG +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNALRSG*ALFLDR
Trigger: CCTATCAAGAAAGAGCGCTCACCCAGACCTCAGAGC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTTGTCTAGGGAGAGATaGTCTGTTTTCCTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPLSRER*SVFLSA
Trigger: GGCACTAAGGAAAACAGATCATCTCTCCCTAGACAA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTTTGTCTAGGGAGAGATaGTCTGTTTTCCTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRLSRER*SVFLSA
Trigger: GGCACTAAGGAAAACAGATCATCTCTCCCTAGACAA...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCAACTGTGATGATTTCTaGAAGATTTCGGGCGGGATG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPNCDDF*KISGGM
Trigger: CATCCCGCCCGAAATCTTTCAGAAATCATCACAGTT...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGATGCTTCAACACATCTaGGAGATGTGCATTCATAAC +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVMLQHI*EMCIHN
Trigger: GTTATGAATGCACATCTCTCAGATGTGTTGAAGCAT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTGCCAGAATGACACATaGGCCTCGGACTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNCQNDT*ASDSGN
Trigger: GTTCCCTGAGTCCGAGGCTCATGTGTCATTCTGGCA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp AGATCTCCTTTGACTCCCTTTAGGTCTCCTTTTAACAAAGAATCCAAGGTGAAGTGCCAGAATGACACATaGGCCTCGGACTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: RSPLTPFRSPFNKESKVKCQNDT*ASDSGN
Trigger: GTTCCCTGAGTCCGAGGCTCATGTGTCATTCTGGCA...CTTCACCTTGGATTCTTTGTTAAAAGGAGACCTAAAGGGAGTCAAAGGAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp GTGGTGGCTTTTGTGGCAACTCTGCCAACTGTGATGATTTCTGAAAGATTTCGGGTTGGAGTCTTCAGATaGTTGCTTTTGGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: VVAFVATLPTVMISERFRVGVFR*LLLDGV
Trigger: GACGCCATCCAAAAGCAAGCATCTGAAGACTCCAAC...CCGAAATCTTTCAGAAATCATCACAGTTGGCAGAGTTGCCACAAAAGCCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGACAATCTTAAGGTTCTaGGTTTTGCTAGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVTILRF*VLLVRQ
Trigger: CTGTCTGACTAGCAAAACGCAGAACCTTAAGATTGT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAACAGAGTCAATTCTATaGCTTTCAACGGTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKTESIL*LSTVAG
Trigger: TCCAGCAACCGTTGAAAGGCATAGAATTGACTCTGT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp TCTCCTTTTAACAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGCTGAGCAACCTCAGATaGAGACTTCCATCCGGACAC +
Preference number: 4 (lower is better)
Translates to: SPFNKESKVKITLWLKPWLSNLR*RLPSGH
Trigger: GTGTCCGGATGGAAGTCTGCATCTGAGGTTGCTCAG...CCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp CAGAACATTCTATACAGGTCAAAATACCCAAGTTGGTTGAAAGCCAGGTGGGTTTCCGAGACAGAGATCTaGTCCGGCATCCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: QNILYRSKYPSWLKARWVSETEI*SGIHFW
Trigger: CCAGAAATGGATGCCGGACCAGATCTCTGTCTCGGA...AACCCACCTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ACAATCTTAAGGTTCTGCGTTTTGCTAGTCAGACAGGATATGAACAAAGGACACCTCCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: TILRFCVLLVRQDMNKGHLHGRP*LGPLLC
Trigger: GCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGAG...GTGTCCTTTGTTCATATCCTGTCTGACTAGCAAAACGCAGAACCTTAAGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACTCCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKLHGRP*LGPLLC
Trigger: GCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGAG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ACAATCTTAAGGTTCTGCGTTTTGCTAGTCAGACAGGATATGAACAAAGGACACGCAAATGTCATTCCCTaGGAGCCGCTGGACATCCTC +
Preference number: 4 (lower is better)
Translates to: TILRFCVLLVRQDMNKGHANVIP*EPLDIL
Trigger: GAGGATGTCCAGCGGCTCCCAGGGAATGACATTTGC...GTGTCCTTTGTTCATATCCTGTCTGACTAGCAAAACGCAGAACCTTAAGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGCAGTTTCTCCAGCCTaGTTAACTATATCCACAGTG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPAVSPA*LTISTV
Trigger: CACTGTGGATATAGTTAACCAGGCTGGAGAAACTGC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACACAGTCTTTGCAGAACTaGTGCTCGACTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTQSLQN*CSTAGI
Trigger: TATCCCAGCAGTCGAGCACCAGTTCTGCAAAGACTG...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCAGGTCTCCAGGTGGTaGCTTTTGTGGCAACTCTGC +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNQVSRW*LLWQLC
Trigger: GCAGAGTTGCCACAAAAGCCACCACCTGGAGACCTG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp ACAGAGATCTGGTCCGGCATCCATTTCTGGGCCATAATCCTCTTTAAATTTGAAGGCAAATCTCCAATTTaGGGCTTGGGGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TEIWSGIHFWAIILFKFEGKSPI*GLGASS
Trigger: AGAACTGGCCCCCAAGCCCCAAATTGGAGATTTGCC...TTCAAATTTAAAGAGGATTATGGCCCAGAAATGGATGCCGGACCAGATCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGATTTTTCTGGGCAGTaGTACGGGCGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKDFSGQ*YGRLWQ
Trigger: CTGCCAGAGACGCCCGTACCACTGCCCAGAAAAATC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTGCCAAGGATGGCTTTaGCAAACCAGTAAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNCQGWL*QTSKAR
Trigger: GCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTCCTTTCAACGGTTGCTaGAGACCACTTCTATTTGCA +
Preference number: 4 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRPFNGC*RPLLFA
Trigger: TGCAAATAGAAGTGGTCTCCAGCAACCGTTGAAAGG...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCCTTGGTTTCAGCACCTaGATTCTACATACAGTAGGG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPLGFST*ILHTVG
Trigger: CCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAG...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR CAA 72 bp GCATTAGGTTTTACTTGGCAGGTGAGAAGGTTCAACTaGGCTGGTTGCCTGTTAGATGTGGCATGTGAGATG +
Preference number: 4 (lower is better)
Translates to: ALGFTWQVRRFN*AGCLLDVACEM
Trigger: CATCTCACATGCCACATCTAACAGGCAACCAGCCAAGTTGAACCTTCTCACCTGCCAAGTAAAACCTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp TCTCCTTTTAACAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGTTATTGCCCTGGAGCTaGTGCATGCTGTATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPFNKESKVKITLWLKPWLLPWS*CMLYPP
Trigger: AGGAGGATACAGCATGCATCAGCTCCAGGGCAATAA...CCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGTTTTACTTGGCAGGTaGGAAGGTTCAACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTVLLGR*EGSTWL
Trigger: CAGCCAAGTTGAACCTTCTCACCTGCCAAGTAAAAC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp TCTCCTTTTAACAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGAAATGGAGAGATGTCTaGTCTGCAGTTCGGACGGCA +
Preference number: 4 (lower is better)
Translates to: SPFNKESKVKITLWLKPWKWRDV*SAVRTA
Trigger: TGCCGTCCGAACTGCAGATCAGACATCTCTCCATTT...CCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGTTTGTAGTCTTACTTaGAGAGGATGGACCCCCATC +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTVCSLT*RGWTPI
Trigger: GATGGGGGTCCATCCTCTTCAAGTAAGACTACAAAC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCCTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPLSATF*GSLGRT
Trigger: AGTTCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACATTATATCCCCCTCCTaGGGTGGCCCTTCCATGAGT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNIISPS*GGPSMS
Trigger: ACTCATGGAAGGGCCACCTCAGGAGGGGGATATAAT...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCAACTTGGTTATGAATTaGCTTGAAGGTGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPNLVMN*LEGGQS
Trigger: GCTCTGTCCACCTTCAAGTCAATTCATAACCAAGTT...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGTTAAAATGTGTAAATaGATGACCGGGACACTGAGC +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPVKMCK*MTGTLS
Trigger: GCTCAGTGTCCCGGTCATTCATTTACACATTTTAAC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACAAAGGTATTTCTACTaGGTTTTCCTATGTCCCACA +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKQRYFY*VFLCPT
Trigger: TGTGGGACATAGGAAAACTCAGTAGAAATACCTTTG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTACTTTATAAGATTCTaGAGCAGATCCACACCCTTT +
Preference number: 4 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVYFIRF*SRSTPF
Trigger: AAAGGGTGTGGATCTGCTGCAGAATCTTATAAAGTA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCACCCCTTCTTTTCACTaGCATATTCCTTATTGCCCT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPTPSFH*HIPYCP
Trigger: AGGGCAATAAGGAATATGGCAGTGAAAAGAAGGGGT...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GTGGTGGCTTTTGTGGCAACTCTGCCAACTGTGATGATTTCTGAAAGATTTCGGTTCAACTTGGCTGGTTaGCTGTTAGATGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: VVAFVATLPTVMISERFRFNLAG*LLDVAC
Trigger: ACATGCCACATCTAACAGGCAACCAGCCAAGTTGAA...CCGAAATCTTTCAGAAATCATCACAGTTGGCAGAGTTGCCACAAAAGCCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp TTTAATGAGATATTCACACATTTGGAGCTGAAAGAGGCGCCTTTCCTTCTCCATGAACTGGTGCTCGACTaGTGGGATAGTCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: FNEIFTHLELKEAPFLLHELVLD*WDSPSN
Trigger: GTTTGAGGGACTATCCCAGCAGTCGAGCACCAGTTC...ATGGAGAAGGAAAGGCGCCTCTTTCAGCTCCAAATGTGTGAATATCTCATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAACAATCTTAAGGTTCTaGGTTTTGCTAGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKTILRF*VLLVRQ
Trigger: CTGTCTGACTAGCAAAACGCAGAACCTTAAGATTGT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGAGACCACTTCTATTTaGAAAGCCAGCAGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPETTSI*KASSSY
Trigger: ATAGGAACTGCTGGCTTTGCAAATAGAAGTGGTCTC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCACAGAGTCAATTCTATaGCTTTCAACGGTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPTESIL*LSTVAG
Trigger: TCCAGCAACCGTTGAAAGGCATAGAATTGACTCTGT...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAAATGGATGCAATGGATaGTTCAACACATCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKNGCNG*FNTSER
Trigger: TCTCTCAGATGTGTTGAAGCATCCATTGCATCCATT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCTGAGCAACCTCAGATaGAGACTTCCATCCGGACAC +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLSNLR*RLPSGH
Trigger: GTGTCCGGATGGAAGTCTGCATCTGAGGTTGCTCAG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp TTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCTCTCGACGAAAAACTaGAGAGCCTGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LLLQTSSLSEGLFYLGLELSTKN*RAWRLK
Trigger: CTTCAGCCTCCAGGCTCTCCAGTTTTTCGTCGAGAG...CTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATCCGAGACAGAGATCTaGTCCGGCATCCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKSETEI*SGIHFW
Trigger: CCAGAAATGGATGCCGGACCAGATCTCTGTCTCGGA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000521075.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCCCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPPGFVK*LLEISF
Trigger: AAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGG...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAAAGGTTCAACTTGGCTaGTTGCCTGTTAGATGTGGC +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTKVQLG*LPVRCG
Trigger: GCCACATCTAACAGGCAACCAGCCAAGTTGAACCTT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATGGTTGAAAGCCAGGTaGGTTCTGATGAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTWLKAR*VLMSHN
Trigger: ATTGTGGCTCATCAGAACCCACCTGGCTTTCAACCA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTGTTTCCTACATTCTTaGCCAGCAAGAGTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPCFLHS*PARVQK
Trigger: CTTCTGAACTCTTGCTGGCCAAGAATGTAGGAAACA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTTGTTTCCTACATTCTTaGCCAGCAAGAGTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRCFLHS*PARVQK
Trigger: CTTCTGAACTCTTGCTGGCCAAGAATGTAGGAAACA...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAAGCAGATCTTCACACTaGGTAGCTTTTAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKSRSSH*VAFSLF
Trigger: AAAGAGACTAAAAGCTACCCAGTGTGAAGATCTGCT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTTTCCAGATTTAGCCTaGGAAAGCAGATCTTCACAC +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPFPDLA*ESRSSH
Trigger: GTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TTTAATGAGATATTCACACATTTGGAGCTGAAAGAGGCGCCTTTCCTTCTCCATCTGCCACTAGAGGTCTaGGTGCTTAGAGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: FNEIFTHLELKEAPFLLHLPLEV*VLRGSV
Trigger: AACACTCCCTCTAAGCACCCAGACCTCTAGTGGCAG...ATGGAGAAGGAAAGGCGCCTCTTTCAGCTCCAAATGTGTGAATATCTCATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp TGTGGATTGAACTTTCCAGATTTAGCCTGGGAAAGCAGATCTTCACACTGGGTATTTAGGAAGAACTCTTaGGCCAAGGGCAGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: CGLNFPDLAWESRSSHWVFRKNS*AKGSLC
Trigger: GCAAAGACTGCCCTTGGCCCAAGAGTTCTTCCTAAA...TACCCAGTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAAGTTCAATCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATTTCGGGCGGGATGGTaGCTTTGTCTAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKFRAGW*LCLGRD
Trigger: ATCTCTCCCTAGACAAAGCCACCATCCCGCCCGAAA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACATCCCCCTCCTGAGGTaGCCCTTCCATGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNIPLLR*PFHEFL
Trigger: AAGAAACTCATGGAAGGGCCACCTCAGGAGGGGGAT...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
3UTR CAA 72 bp CAGAACATTCTATACAGGTCAAAATACCCAAGTTGGTaGAAAGCCAGGTGGGTTCTGATGAGCCACAATCGC +
Preference number: 4 (lower is better)
Translates to: QNILYRSKYPSW*KARWVLMSHNR
Trigger: GCGATTGTGGCTCATCAGAACCCACCTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CAA 72 bp GTTTCTCCAGCCTGGTTAACTATATCCACAGTGGGCTaGCTCCTGAGCAAAAGCTTCAAACACTCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: VSPAWLTISTVG*LLSKSFKHSGL
Trigger: TAAACCTGAGTGTTTGAAGCTTTTGCTCAGGAGCAAGCCCACTGTGGATATAGTTAACCAGGCTGGAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp TTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGGAAACCATGCCTCAGTaGAAACCATCTGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: LLLQTSSLSEGLFYLGLEETMPQ*KPSAPL
Trigger: GAGAGGTGCAGATGGTTTTCACTGAGGCATGGTTTC...CTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR TCA 90 bp AGATCTCCTTTGACTCCCTTTAGGTCTCCTTTTAACAAAGAATCCAAGGTGAAGGAAACCATGCCTCAGTaGAAACCATCTGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: RSPLTPFRSPFNKESKVKETMPQ*KPSAPL
Trigger: GAGAGGTGCAGATGGTTTTCACTGAGGCATGGTTTC...CTTCACCTTGGATTCTTTGTTAAAAGGAGACCTAAAGGGAGTCAAAGGAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR TCA 90 bp AGATCTCCTTTGACTCCCTTTAGGTCTCCTTTTAACAAAGAATCCAAGGTGAAGTCACACATTTGGAGCTaGAAGAGGCGCCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RSPLTPFRSPFNKESKVKSHIWS*KRRLSF
Trigger: GAAGGAAAGGCGCCTCTTTCAGCTCCAAATGTGTGA...CTTCACCTTGGATTCTTTGTTAAAAGGAGACCTAAAGGGAGTCAAAGGAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTTATTGCCCTGGAGCTaGTGCATGCTGTATCCTCCT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLLPWS*CMLYPP
Trigger: AGGAGGATACAGCATGCATCAGCTCCAGGGCAATAA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATCAGAATCCCATTCTTaGCTGAACACTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTSESHS*LNTSSS
Trigger: AGAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGTTAGATGTGGCATGTaGGATGGTCAGAATCCCATT +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTVRCGM*DGQNPI
Trigger: AATGGGATTCTGACCATCTCACATGCCACATCTAAC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAAAATGGAGAGATGTCTaGTCTGCAGTTCGGACGGCA +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKKWRDV*SAVRTA
Trigger: TGCCGTCCGAACTGCAGATCAGACATCTCTCCATTT...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp ATATATTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCGCTCTGAGGTCTGGGTaGGCGCTCTTTCTTGATAGG +
Preference number: 4 (lower is better)
Translates to: IYCFYRLLHFLKGCSILVALRSG*ALFLDR
Trigger: CCTATCAAGAAAGAGCGCTCACCCAGACCTCAGAGC...GACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp CTGTCGAAGATTCCACTCATATTCTACGTGGACGTGTGGATTGAACTTTCCAGAAACTGTGATGATTTCTaGAAGATTTCGGGCGGGATG +
Preference number: 4 (lower is better)
Translates to: LSKIPLIFYVDVWIELSRNCDDF*KISGGM
Trigger: CATCCCGCCCGAAATCTTTCAGAAATCATCACAGTT...TCTGGAAAGTTCAATCCACACGTCCACGTAGAATATGAGTGGAATCTTCGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCTACCCTCATACTGGTaGAGGCAGAAAACCACAGGA +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLPSYW*RQKTTG
Trigger: TCCTGTGGTTTTCTGCCTTCACCAGTATGAGGGTAG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACTACCCTCATACTGGTaGAGGCAGAAAACCACAGGA +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKLPSYW*RQKTTG
Trigger: TCCTGTGGTTTTCTGCCTTCACCAGTATGAGGGTAG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp TCCTTTGTAAGAGTAGAAAACTTGACAAACGCGGTGCCAAGGTCGGGGTTGTCTATGCTTCAACACATCTaGGAGATGTGCATTCATAAC +
Preference number: 4 (lower is better)
Translates to: SFVRVENLTNAVPRSGLSMLQHI*EMCIHN
Trigger: GTTATGAATGCACATCTCTCAGATGTGTTGAAGCAT...AGACAACCCCGACCTTGGCACCGCGTTTGTCAAGTTTTCTACTCTTACAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp GGACAGTTCCTTTGTAAGAGTAGAAAACTTGACAAACGCGGTGCCAAGGTCGGGTACTTTATAAGATTCTaGAGCAGATCCACACCCTTT +
Preference number: 4 (lower is better)
Translates to: GQFLCKSRKLDKRGAKVGYFIRF*SRSTPF
Trigger: AAAGGGTGTGGATCTGCTGCAGAATCTTATAAAGTA...CCCGACCTTGGCACCGCGTTTGTCAAGTTTTCTACTCTTACAAAGGAACTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp ATTTTTCAGCAGTGTGGACAGTTCCTTTGTAAGAGTAGAAAACTTGACAAACGCGAACACTTCCTCCTCTaGCATACTTTCCGGATCCCG +
Preference number: 4 (lower is better)
Translates to: IFQQCGQFLCKSRKLDKREHFLL*HTFRIP
Trigger: CGGGATCCGGAAAGTATGGCAGAGGAGGAAGTGTTC...GCGTTTGTCAAGTTTTCTACTCTTACAAAGGAACTGTCCACACTGCTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAAAAAACTGGAGAGCCTaGAGGCTGAAGATCTCATGT +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTKNWRA*RLKISC
Trigger: ACATGAGATCTTCAGCCTCCAGGCTCTCCAGTTTTT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGCGAGTCTGTGCTTGTaGAAACGAAGATCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNASLCL*KRRSGW
Trigger: CCAACCAGATCTTCGTTTCCACAAGCACAGACTCGC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp ACTCCCTTTAGGTCTCCTTTTAACAAAGAATCCAAGGTGAAGATCACATTGTGGGCGAGTCTGTGCTTGTaGAAACGAAGATCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: TPFRSPFNKESKVKITLWASLCL*KRRSGW
Trigger: CCAACCAGATCTTCGTTTCCACAAGCACAGACTCGC...CCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGGAGACCTAAAGGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACAGTCTTTGCAGAACTaGTGCTCGACTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKQSLQN*CSTAGI
Trigger: TATCCCAGCAGTCGAGCACCAGTTCTGCAAAGACTG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp GTTTTGTACAAGGAAGTCAACCAAATGGAGAGATGTCTGATCTGCAGTTCGGACCCTTCATCTGTGGTTTaGGAGGTAAGTCTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: VLYKEVNQMERCLICSSDPSSVV*EVSLRV
Trigger: AACTCTCAGACTTACCTCCCAAACCACAGATGAAGG...GTCCGAACTGCAGATCAGACATCTCTCCATTTGGTTGACTTCCTTGTACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACACCTTCATCTGTGGTTTaGGAGGTAAGTCTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTPSSVV*EVSLRV
Trigger: AACTCTCAGACTTACCTCCCAAACCACAGATGAAGG...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp TTTTTGTCTTCGGCATTAGGTTTTACTTGGCAGGTGAGAAGGTTCAACTTGGCTGAGACATCTCCAGTCTaGGATTTTGCTAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FLSSALGFTWQVRRFNLAETSPV*DFASRS
Trigger: AGACCTGCTAGCAAAATCCCAGACTGGAGATGTCTC...AGCCAAGTTGAACCTTCTCACCTGCCAAGTAAAACCTAATGCCGAAGACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATCAGATGCTTGCTTTTaGATGGCGTCTCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKSDACF*MASLDC
Trigger: GCAGTCCAGAGACGCCATCCAAAAGCAAGCATCTGA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR CAA 72 bp CACGGAAGGCCATGGTTAGGGCCTCTTCTTTGCTATTaGTCAATACTGATATCCATGCTACATAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: HGRPWLGPLLCY*SILISMLHNPA
Trigger: AGCAGGATTATGTAGCATGGATATCAGTATTGACAAATAGCAAAGAAGAGGCCCTAACCATGGCCTTCCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CAA 72 bp ATGCCAGAACATTCTATACAGGTCAAAATACCCAAGTaGGTTGAAAGCCAGGTGGGTTCTGATGAGCCACAA +
Preference number: 4 (lower is better)
Translates to: MPEHSIQVKIPK*VESQVGSDEPQ
Trigger: TTGTGGCTCATCAGAACCCACCTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
3UTR CAA 72 bp CGAAGATTCCACTCATATTCTACGTGGACGTGTGGATaGAACTTTCCAGATTTAGCCTGGGAAAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: RRFHSYSTWTCG*NFPDLAWESRS
Trigger: AGATCTGCTTTCCCAGGCTAAATCTGGAAAGTTCAATCCACACGTCCACGTAGAATATGAGTGGAATCTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGTTTTACTTGGCAGGTaGGAAGGTTCAACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKVLLGR*EGSTWL
Trigger: CAGCCAAGTTGAACCTTCTCACCTGCCAAGTAAAAC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp ACTCCCTTTAGGTCTCCTTTTAACAAAGAATCCAAGGTGAAGATCACATTGTGGGTTTTACTTGGCAGGTaGGAAGGTTCAACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: TPFRSPFNKESKVKITLWVLLGR*EGSTWL
Trigger: CAGCCAAGTTGAACCTTCTCACCTGCCAAGTAAAAC...CCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGGAGACCTAAAGGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGGCAGCAGTCTTGCATaGAGGATGTGGACAATCTTA +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKGSSLA*RMWTIL
Trigger: TAAGATTGTCCACATCCTTCATGCAAGACTGCTGCC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGAGGTGGCCCTTCCATaGGTTTCTTACTCTGTAACA +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKEVALP*VSYSVT
Trigger: TGTTACAGAGTAAGAAACTCATGGAAGGGCCACCTC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp ATTTTTCAGCAGTGTGGACAGTTCCTTTGTAAGAGTAGAAAACTTGACAAACGCAATGTAGTGCCAGAATaGCACATGAGCCTCGGACTC +
Preference number: 4 (lower is better)
Translates to: IFQQCGQFLCKSRKLDKRNVVPE*HMSLGL
Trigger: GAGTCCGAGGCTCATGTGTCATTCTGGCACTACATT...GCGTTTGTCAAGTTTTCTACTCTTACAAAGGAACTGTCCACACTGCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGTTAAAATGTGTAAATaGATGACCGGGACACTGAGC +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTVKMCK*MTGTLS
Trigger: GCTCAGTGTCCCGGTCATTCATTTACACATTTTAAC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTACTTTATAAGATTCTaGAGCAGATCCACACCCTTT +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPYFIRF*SRSTPF
Trigger: AAAGGGTGTGGATCTGCTGCAGAATCTTATAAAGTA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTGCCATATTCCTTATTaGCCTGGAGCTGATGCATGC +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNCHIPY*PGADAC
Trigger: GCATGCATCAGCTCCAGGGCAATAAGGAATATGGCA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGTTGGAGTCTTCAGATaGTTGCTTTTGGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNVGVFR*LLLDGV
Trigger: GACGCCATCCAAAAGCAAGCATCTGAAGACTCCAAC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGCTATATACACACTGTaGCCAGGGTTACATGAAGGC +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKAIYTL*PGLHEG
Trigger: GCCTTCATGTAACCCTGGGCACAGTGTGTATATAGC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACAAGGTTCAACTTGGCTaGTTGCCTGTTAGATGTGGC +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNKVQLG*LPVRCG
Trigger: GCCACATCTAACAGGCAACCAGCCAAGTTGAACCTT...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATGGTTGAAAGCCAGGTaGGTTCTGATGAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKWLKAR*VLMSHN
Trigger: ATTGTGGCTCATCAGAACCCACCTGGCTTTCAACCA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAACCCCCATTTCCCTATaGATGCCAGAACATTCTATA +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTTPISL*MPEHSI
Trigger: TATAGAATGTTCTGGCATCCATAGGGAAATGGGGGT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTTTGGATGGCGTCTCTaGACTGCACATTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNFGWRL*TAHLGI
Trigger: TATCCCCAAATGTGCAGTCCAGAGACGCCATCCAAA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp ACAATCTTAAGGTTCTGCGTTTTGCTAGTCAGACAGGATATGAACAAAGGACACTTTGGATGGCGTCTCTaGACTGCACATTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: TILRFCVLLVRQDMNKGHFGWRL*TAHLGI
Trigger: TATCCCCAAATGTGCAGTCCAGAGACGCCATCCAAA...GTGTCCTTTGTTCATATCCTGTCTGACTAGCAAAACGCAGAACCTTAAGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAATGCTTGCTTTTGGATaGCGTCTCTGGACTGCACAT +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKMLAFG*RLWTAH
Trigger: ATGTGCAGTCCAGAGACGCCATCCAAAAGCAAGCAT...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ACAATCTTAAGGTTCTGCGTTTTGCTAGTCAGACAGGATATGAACAAAGGACACATGCTTGCTTTTGGATaGCGTCTCTGGACTGCACAT +
Preference number: 4 (lower is better)
Translates to: TILRFCVLLVRQDMNKGHMLAFG*RLWTAH
Trigger: ATGTGCAGTCCAGAGACGCCATCCAAAAGCAAGCAT...GTGTCCTTTGTTCATATCCTGTCTGACTAGCAAAACGCAGAACCTTAAGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACATGCTTGCTTTTGGATaGCGTCTCTGGACTGCACAT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNMLAFG*RLWTAH
Trigger: ATGTGCAGTCCAGAGACGCCATCCAAAAGCAAGCAT...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGGGAAAAGAAACACTTaGTTTCAGCACCTGGATTCT +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTGKRNT*FQHLDS
Trigger: AGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGCTTTTCCTAAGGGTTaGGTTGGGAGTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNAFPKG*VGSCAS
Trigger: AGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
3UTR CAA 72 bp CTATGCCTTTCAACGGTTGCTGGAGACCACTTCTATTaGCAAAGCCAGCAGTTCCTATACTCCTATTTTTGT +
Preference number: 4 (lower is better)
Translates to: LCLSTVAGDHFY*QSQQFLYSYFC
Trigger: ACAAAAATAGGAGTATAGGAACTGCTGGCTTTGCAAATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTTGTCTAGGGAGAGATaGTCTGTTTTCCTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLSRER*SVFLSA
Trigger: GGCACTAAGGAAAACAGATCATCTCTCCCTAGACAA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACAACTGTGATGATTTCTaGAAGATTTCGGGCGGGATG +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNNCDDF*KISGGM
Trigger: CATCCCGCCCGAAATCTTTCAGAAATCATCACAGTT...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp GTGGTGGCTTTTGTGGCAACTCTGCCAACTGTGATGATTTCTGAAAGATTTCGGTCAAAAACTTGGTTATaGATTGACTTGAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: VVAFVATLPTVMISERFRSKTWL*IDLKVD
Trigger: GTCCACCTTCAAGTCAATTCATAACCAAGTTTTTGA...CCGAAATCTTTCAGAAATCATCACAGTTGGCAGAGTTGCCACAAAAGCCACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAAGGGAACAGTTCCACTaGCTGTGGAGTACAACTATT +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKREQFH*LWSTTI
Trigger: AATAGTTGTACTCCACAGTCAGTGGAACTGTTCCCT...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp TTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCTCCTGTTATCTCTGTaGGGATCATCCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: LLLQTSSLSEGLFYLGLELLLSL*GSSHVV
Trigger: AACAACATGGGATGATCCGCACAGAGATAACAGGAG...CTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAATCCTGCTCATCTTCTaGCTGAAAGTGATATGTTCT +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTILLIF*LKVICS
Trigger: AGAACATATCACTTTCAGGCAGAAGATGAGCAGGAT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTTAGGGCCTCTTCTTTaGTATTTGTCAATACTGATA +
Preference number: 4 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPLGPLL*YLSILI
Trigger: TATCAGTATTGACAAATAGCAAAGAAGAGGCCCTAA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGATGTAAGTGCTAGATaGCAAGGATGGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNDVSAR*QGWLWQ
Trigger: TTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp TCTCCTTTTAACAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGATGCCTTTCAACGGTTaGTGGAGACCACTTCTATTT +
Preference number: 4 (lower is better)
Translates to: SPFNKESKVKITLWLKPWMPFNG*WRPLLF
Trigger: AAATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCAT...CCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATTGGGTTGGGAGTTGTaGTTCTGTGAAATTAACATC +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTLGWEL*FCEINI
Trigger: GATGTTAATTTCACAGAAGCACAACTCCCAACCCAA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp AGATCTCCTTTGACTCCCTTTAGGTCTCCTTTTAACAAAGAATCCAAGGTGAAGAAAAACTGGAGAGCCTaGAGGCTGAAGATCTCATGT +
Preference number: 4 (lower is better)
Translates to: RSPLTPFRSPFNKESKVKKNWRA*RLKISC
Trigger: ACATGAGATCTTCAGCCTCCAGGCTCTCCAGTTTTT...CTTCACCTTGGATTCTTTGTTAAAAGGAGACCTAAAGGGAGTCAAAGGAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATTGTGGCTCAAACCCTaGAGCAGATTTTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKLWLKP*SRFFSS
Trigger: ACTGCTGAAAAATCTGCTCCAGGGTTTGAGCCACAA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CCA 90 bp ACTCCCTTTAGGTCTCCTTTTAACAAAGAATCCAAGGTGAAGATCACATTGTGGTTGTGGCTCAAACCCTaGAGCAGATTTTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: TPFRSPFNKESKVKITLWLWLKP*SRFFSS
Trigger: ACTGCTGAAAAATCTGCTCCAGGGTTTGAGCCACAA...CCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGGAGACCTAAAGGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGCAGTTTCTCCAGCCTaGTTAACTATATCCACAGTG +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKAVSPA*LTISTV
Trigger: CACTGTGGATATAGTTAACCAGGCTGGAGAAACTGC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp CTGTCGAAGATTCCACTCATATTCTACGTGGACGTGTGGATTGAACTTTCCAGAAGCAGATCTTCACACTaGGTAGCTTTTAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LSKIPLIFYVDVWIELSRSRSSH*VAFSLF
Trigger: AAAGAGACTAAAAGCTACCCAGTGTGAAGATCTGCT...TCTGGAAAGTTCAATCCACACGTCCACGTAGAATATGAGTGGAATCTTCGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp CTGTCGAAGATTCCACTCATATTCTACGTGGACGTGTGGATTGAACTTTCCAGATTCTACGTGGACGTGTaGATTGAACTTTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: LSKIPLIFYVDVWIELSRFYVDV*IELSRF
Trigger: AAATCTGGAAAGTTCAATCCACACGTCCACGTAGAA...TCTGGAAAGTTCAATCCACACGTCCACGTAGAATATGAGTGGAATCTTCGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACACACTCATATTCTACGTaGACGTGTGGATTGAACTTT +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTHSYST*TCGLNF
Trigger: AAAGTTCAATCCACACGTCCACGTAGAATATGAGTG...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATTTTTCAGCAGTGTGGACAGTTCCTTTGTAAGAGTAGAAAACTTGACAAACGCGCTAGATGCCAAGGATaGCTTTGGCAAACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: IFQQCGQFLCKSRKLDKRARCQG*LWQTSK
Trigger: CTTACTGGTTTGCCAAAGCCATCCTTGGCATCTAGC...GCGTTTGTCAAGTTTTCTACTCTTACAAAGGAACTGTCCACACTGCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACCTTTCAACGGTTGCTaGAGACCACTTCTATTTGCA +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKPFNGC*RPLLFA
Trigger: TGCAAATAGAAGTGGTCTCCAGCAACCGTTGAAAGG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAATGCTCTGTTTGGTGTaGAAATTCACATGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKMLCLV*KFTCAL
Trigger: CAGGGCACATGTGAATTTCCACACCAAACAGAGCAT...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
3UTR CAA 72 bp TCTCCTTTTAACAAAGAATCCAAGGTGAAGATCACATaGTGGCTCAAACCCTGGAGCAGATTTTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SPFNKESKVKIT*WLKPWSRFFSS
Trigger: ACTGCTGAAAAATCTGCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR TCA 90 bp CTGGAGCAGATTTTTCAGCAGTGTGGACAGTTCCTTTGTAAGAGTAGAAAACTTGTAAATCCCTGGATTTaGTGGCCTCAAGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: LEQIFQQCGQFLCKSRKLVNPWI*WPQAIH
Trigger: ATGAATTGCTTGAGGCCATCAAATCCAGGGATTTAC...AAGTTTTCTACTCTTACAAAGGAACTGTCCACACTGCTGAAAAATCTGCTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGTAAATCCCTGGATTTaGTGGCCTCAAGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNVNPWI*WPQAIH
Trigger: ATGAATTGCTTGAGGCCATCAAATCCAGGGATTTAC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLSATF*GSLGRT
Trigger: AGTTCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp ACAATCTTAAGGTTCTGCGTTTTGCTAGTCAGACAGGATATGAACAAAGGACACAACTTGGTTATGAATTaGCTTGAAGGTGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: TILRFCVLLVRQDMNKGHNLVMN*LEGGQS
Trigger: GCTCTGTCCACCTTCAAGTCAATTCATAACCAAGTT...GTGTCCTTTGTTCATATCCTGTCTGACTAGCAAAACGCAGAACCTTAAGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACACCCCTTCTTTTCACTaGCATATTCCTTATTGCCCT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNTPSFH*HIPYCP
Trigger: AGGGCAATAAGGAATATGGCAGTGAAAAGAAGGGGT...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp CTGGAGCAGATTTTTCAGCAGTGTGGACAGTTCCTTTGTAAGAGTAGAAAACTTGAGACCACTTCTATTTaGAAAGCCAGCAGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: LEQIFQQCGQFLCKSRKLETTSI*KASSSY
Trigger: ATAGGAACTGCTGGCTTTGCAAATAGAAGTGGTCTC...AAGTTTTCTACTCTTACAAAGGAACTGTCCACACTGCTGAAAAATCTGCTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGAGACCACTTCTATTTaGAAAGCCAGCAGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNETTSI*KASSSY
Trigger: ATAGGAACTGCTGGCTTTGCAAATAGAAGTGGTCTC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAATGCCTTTCAACGGTTaGTGGAGACCACTTCTATTT +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKMPFNG*WRPLLF
Trigger: AAATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCAT...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATCAAAATACCCAAGTTaGTTGAAAGCCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKSKYPS*LKARWV
Trigger: AACCCACCTGGCTTTCAACCAACTTGGGTATTTTGA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTTTCCAGATTTAGCCTaGGAAAGCAGATCTTCACAC +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNFPDLA*ESRSSH
Trigger: GTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp TTTAATGAGATATTCACACATTTGGAGCTGAAAGAGGCGCCTTTCCTTCTCCATTTTCCAGATTTAGCCTaGGAAAGCAGATCTTCACAC +
Preference number: 4 (lower is better)
Translates to: FNEIFTHLELKEAPFLLHFPDLA*ESRSSH
Trigger: GTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA...ATGGAGAAGGAAAGGCGCCTCTTTCAGCTCCAAATGTGTGAATATCTCATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATTTCCAGATTTAGCCTaGGAAAGCAGATCTTCACAC +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKFPDLA*ESRSSH
Trigger: GTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGGGAAAAGAAACACTTaGTTTCAGCACCTGGATTCT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNGKRNT*FQHLDS
Trigger: AGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGTTTTCAAGCCATCTTaGAAGAAATTGCACTGTGCA +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNVFKPS*KKLHCA
Trigger: TGCACAGTGCAATTTCTTTCAAGATGGCTTGAAAAC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGAGAACTCAAATTCCTaGTGGAAAACAAAACCGAAC +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKENSNS*WKTKPN
Trigger: GTTCGGTTTTGTTTTCCATCAGGAATTTGAGTTCTC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR TCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCAAAGGTATTTCTACTaGGTTTTCCTATGTCCCACA +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNQRYFY*VFLCPT
Trigger: TGTGGGACATAGGAAAACTCAGTAGAAATACCTTTG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp CAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGAGCAGATTTTTTCAGTGAAAACCATCTaGACCTCTCATTTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: QRIQGEDHIVAQTLEQIFSVKTI*TSHFLK
Trigger: TTTGAGAAAATGAGAGGTGCAGATGGTTTTCACTGA...AAAAATCTGCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR GCA 90 bp CTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCCTTCAGTGAAAACCATCTaGACCTCTCATTTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: LLQTSSLSEGLFYLGLEPSVKTI*TSHFLK
Trigger: TTTGAGAAAATGAGAGGTGCAGATGGTTTTCACTGA...AGGCTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR GCA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATTAAATTTGAAACCATaGCTCAGTGAAAACCATCTG +
Preference number: 4 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTLNLKP*LSENHL
Trigger: CAGATGGTTTTCACTGAGGCATGGTTTCAAATTTAA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000521075.5
CDS-3UTR GCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACATCCTGCTCATCTTCTaGCTGAAAGTGATATGTTCT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNILLIF*LKVICS
Trigger: AGAACATATCACTTTCAGGCAGAAGATGAGCAGGAT...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp TGTGGATTGAACTTTCCAGATTTAGCCTGGGAAAGCAGATCTTCACACTGGGTATTAGGGCCTCTTCTTTaGTATTTGTCAATACTGATA +
Preference number: 4 (lower is better)
Translates to: CGLNFPDLAWESRSSHWVLGPLL*YLSILI
Trigger: TATCAGTATTGACAAATAGCAAAGAAGAGGCCCTAA...TACCCAGTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAAGTTCAATCCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAAATGGATGCAATGGATaGTTCAACACATCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKNGCNG*FNTSER
Trigger: TCTCTCAGATGTGTTGAAGCATCCATTGCATCCATT...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR GCA 90 bp TTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGAATGGATGCAATGGATaGTTCAACACATCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LLLQTSSLSEGLFYLGLENGCNG*FNTSER
Trigger: TCTCTCAGATGTGTTGAAGCATCCATTGCATCCATT...CTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR GCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTTGGGTTGGGAGTTGTaGTTCTGTGAAATTAACATC +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLGWEL*FCEINI
Trigger: GATGTTAATTTCACAGAAGCACAACTCCCAACCCAA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACAGCAGATCTTCACACTaGGTAGCTTTTAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNSRSSH*VAFSLF
Trigger: AAAGAGACTAAAAGCTACCCAGTGTGAAGATCTGCT...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CCA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATTCTACGTGGACGTGTaGATTGAACTTTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: MGKETLGFSTWILHTVGKFYVDV*IELSRF
Trigger: AAATCTGGAAAGTTCAATCCACACGTCCACGTAGAA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTTCTACGTGGACGTGTaGATTGAACTTTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNFYVDV*IELSRF
Trigger: AAATCTGGAAAGTTCAATCCACACGTCCACGTAGAA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp TTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGTTAAATTTGAAACCATaGCTCAGTGAAAACCATCTG +
Preference number: 4 (lower is better)
Translates to: LLLQTSSLSEGLFYLGLELNLKP*LSENHL
Trigger: CAGATGGTTTTCACTGAGGCATGGTTTCAAATTTAA...CTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR GCA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTTAGGGCCTCTTCTTTaGTATTTGTCAATACTGATA +
Preference number: 4 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLGPLL*YLSILI
Trigger: TATCAGTATTGACAAATAGCAAAGAAGAGGCCCTAA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR GCA 90 bp ATTTTTCAGCAGTGTGGACAGTTCCTTTGTAAGAGTAGAAAACTTGACAAACGCTTAAATTTGAAACCATaGCTCAGTGAAAACCATCTG +
Preference number: 4 (lower is better)
Translates to: IFQQCGQFLCKSRKLDKRLNLKP*LSENHL
Trigger: CAGATGGTTTTCACTGAGGCATGGTTTCAAATTTAA...GCGTTTGTCAAGTTTTCTACTCTTACAAAGGAACTGTCCACACTGCTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS CCA 90 bp GCATTATTCCATCGCGGGTTCGGCCGGGCGCTCGCGGCTCTCGGGTaGGAAAGCGAACTGCGACCGGGAAGCGCCGGCTGGGCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: ALFHRGFGRALAALG*ESELRPGSAGWAGG
Trigger: GCCTCCCGCCCAGCCGGCGCTTCCCGGTCGCAGTTCGCTTTCCCACCCGAGAGCCGCGAGCGCCCGGCCGAACCCGCGATGGAATAATGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000518721.6
CDS-3UTR CAA 90 bp GACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAACGGTGTTCCTGCAGTaGTGCAGCCGCGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: DGVPAVVQPRGEAGRGGRTVFLQ*CSRVVK
Trigger: CTTCACCACGCGGCTGCACAACTGCAGGAACACCGT...TCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTCGGATAGGGTTCTCTaGTGTCCGGGTGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATSDRVL*CPGGGG
Trigger: TCCCCCACCACCCGGACACAAGAGAACCCTATCCGA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGGCCAAGGGCAGTCTTaGCAGAACTGGTGCTCGACT +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATGQGQS*QNWCST
Trigger: AGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGTAGGCGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACGCCTAC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACACGGTGTTCCTGCAGTaGTGCAGCCGCGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNTVFLQ*CSRVVK
Trigger: CTTCACCACGCGGCTGCACAACTGCAGGAACACCGT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTTGAAGGTGGGCCAGTaGGACCTTTCCCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNLKVGQ*DLSRRS
Trigger: GGAACGCCGGGAAAGGTCCAACTGGCCCACCTTCAA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGGAGGAGGCCTCTTCTaGGATAGGGTGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRGGGLF*DRVELP
Trigger: TGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTCC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTCGGATAGGGTTCTCTaGTGTCCGGGTGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRSDRVL*CPGGGG
Trigger: TCCCCCACCACCCGGACACAAGAGAACCCTATCCGA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGATTCAGATGCTTGCTTTaGGATGGCGTCTCTGGACTG +
Preference number: 5 (lower is better)
Translates to: DGVPAVVQPRGEAGRGGRFRCLL*DGVSGL
Trigger: CAGTCCAGAGACGCCATCCAAAAGCAAGCATCTGAA...TCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGTTCAACTTGGCTGGTaGCCTGTTAGATGTGGCATG +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATVQLGW*PVRCGM
Trigger: CATGCCACATCTAACAGGCAACCAGCCAAGTTGAAC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGACGTGGACGTGTGGATaGAACTTTCCAGATTTAGCC +
Preference number: 5 (lower is better)
Translates to: RDGVPAVVQPRGEAGRGGTWTCG*NFPDLA
Trigger: GGCTAAATCTGGAAAGTTCAATCCACACGTCCACGT...CCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGGCCAAGGGCAGTCTTaGCAGAACTGGTGCTCGACT +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRGQGQS*QNWCST
Trigger: AGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGCGGATCATCCCATGTaGTTTTGCGTGCTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATADHPM*FCVLSF
Trigger: AAAAGAGAGCACGCAAAACAACATGGGATGATCCGC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGAGATATTCACACATTaGGAGCTGAAAGAGGCGCCT +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATEIFTH*ELKEAP
Trigger: AGGCGCCTCTTTCAGCTCCAAATGTGTGAATATCTC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGTGAGAAGGTTCAACTaGGCTGGTTGCCTGTTAGAT +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATVRRFN*AGCLLD
Trigger: ATCTAACAGGCAACCAGCCAAGTTGAACCTTCTCAC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCAAATACCCAAGTTGGTaGAAAGCCAGGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATKYPSW*KARWVL
Trigger: CAGAACCCACCTGGCTTTCAACCAACTTGGGTATTT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TTCATCTGTGGTTTGGGAGGTAAGTCTGAGAGTTGGGGTTTGGGTGGCAGGTCCTTGAAGGTGGGCCAGTaGGACCTTTCCCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: FICGLGGKSESWGLGGRSLKVGQ*DLSRRS
Trigger: GGAACGCCGGGAAAGGTCCAACTGGCCCACCTTCAA...GGACCTGCCACCCAAACCCCAACTCTCAGACTTACCTCCCAAACCACAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTCCAGGTGGTGGCTTTaGTGGCAACTCTGCCAACTG +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNSRWWL*WQLCQL
Trigger: CAGTTGGCAGAGTTGCCACAAAAGCCACCACCTGGA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCCAGTTCTGTGGGCTTaGGGGGCAGGTCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVPVLWA*GAGLQV
Trigger: CACCTGGAGACCTGCCCCCAAAGCCCACAGAACTGG...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCTTGCTTTCGGCAAATCTCCAATTaGGGGCTTGGGGGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GVSGRVGVRSLESSDACFRQISN*GLGGQF
Trigger: GAACTGGCCCCCAAGCCCCAAATTGGAGATTTGCCG...AAAGCAAGCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACCTCCAGTCTGGGATTTaGCTAGCAGGTCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNLQSGI*LAGLPA
Trigger: AGCTGGGAGACCTGCTAGCAAAATCCCAGACTGGAG...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGCTCCAGTCTGGGATTTaGCTAGCAGGTCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRLQSGI*LAGLPA
Trigger: AGCTGGGAGACCTGCTAGCAAAATCCCAGACTGGAG...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCATGAAGGCAGCAGTCTaGCATGAAGGATGTGGACAA +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATMKAAV*HEGCGQ
Trigger: TTGTCCACATCCTTCATGCAAGACTGCTGCCTTCAT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGGAGACCACTTCTATTaGCAAAGCCAGCAGTTCCTA +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATGDHFY*QSQQFL
Trigger: TAGGAACTGCTGGCTTTGCAAATAGAAGTGGTCTCC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGGGTTGGGTTGGGAGTaGTGCTTCTGTGAAATTAAC +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATGLGWE*CFCEIN
Trigger: GTTAATTTCACAGAAGCACAACTCCCAACCCAACCC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCGGCATTAGGTTTTACTaGGCAGGTGAGAAGGTTCAA +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATGIRFY*AGEKVQ
Trigger: TTGAACCTTCTCACCTGCCAAGTAAAACCTAATGCC...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCAGGTTCCCACAGTTTaGTACAAGGAAGTCAACCAA +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATQVPTV*YKEVNQ
Trigger: TTGGTTGACTTCCTTGTACAAAACTGTGGGAACCTG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTGGGCGAGTCTGTGCTaGTGGAAACGAAGATCTGGT +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRWASLC*WKRRSG
Trigger: ACCAGATCTTCGTTTCCACAAGCACAGACTCGCCCA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTGGGCGAGTCTGTGCTaGTGGAAACGAAGATCTGGT +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNWASLC*WKRRSG
Trigger: ACCAGATCTTCGTTTCCACAAGCACAGACTCGCCCA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGGAGGAGGCCTCTTCTaGGATAGGGTGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVGGGLF*DRVELP
Trigger: TGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTCC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACCAGTTCTGTGGGCTTaGGGGGCAGGTCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKPVLWA*GAGLQV
Trigger: CACCTGGAGACCTGCCCCCAAAGCCCACAGAACTGG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATCTGAGAGTTGGGGTTaGGGTGGCAGGTCCCCCAGC +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKSESWG*GGRSPS
Trigger: GCTGGGGGACCTGCCACCCAAACCCCAACTCTCAGA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAACGGTGTTCCTGCAGTaGTGCAGCCGCGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKTVFLQ*CSRVVK
Trigger: CTTCACCACGCGGCTGCACAACTGCAGGAACACCGT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTCATCCCATGTTGTTTaGCGTGCTCTCTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATSSHVV*RALFSL
Trigger: AAGAGAAAAGAGAGCACGCAAAACAACATGGGATGA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CAA 90 bp CAGCGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTTCATCCCATGTTGTTTaGCGTGCTCTCTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: QRDGVPAVVQPRGEAGRGSSHVV*RALFSL
Trigger: AAGAGAAAAGAGAGCACGCAAAACAACATGGGATGA...ACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp GACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGATGTTTTCAAGCCATCTaGAAAGAAATTGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: DGVPAVVQPRGEAGRGGRCFQAI*KEIALC
Trigger: GCACAGTGCAATTTCTTTCAAGATGGCTTGAAAACA...TCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGTTCAACTTGGCTGGTaGCCTGTTAGATGTGGCATG +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNVQLGW*PVRCGM
Trigger: CATGCCACATCTAACAGGCAACCAGCCAAGTTGAAC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTTGTTTCCTACATTCTaGGCCAGCAAGAGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLFPTF*ASKSSE
Trigger: TTCTGAACTCTTGCTGGCCAAGAATGTAGGAAACAA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCAGTAAATCCCTGGATTaGATGGCCTCAAGCAATTCA +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATSKSLD*MASSNS
Trigger: TGAATTGCTTGAGGCCATCAAATCCAGGGATTTACT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGGTGAGCGCTCTTTCTaGATAGGGCTTGGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRGERSF*IGLGLS
Trigger: TGACAAACCAAGCCCTATCAAGAAAGAGCGCTCACC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGGAGGAGGCCTCTTCTaGGATAGGGTGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKGGGLF*DRVELP
Trigger: TGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTCC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCGGCAAATCTCCAATTaGGGGCTTGGGGGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVRQISN*GLGGQF
Trigger: GAACTGGCCCCCAAGCCCCAAATTGGAGATTTGCCG...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTTCAGATGCTTGCTTTaGGATGGCGTCTCTGGACTG +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNFRCLL*DGVSGL
Trigger: CAGTCCAGAGACGCCATCCAAAAGCAAGCATCTGAA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCTTAAGGTTCTGCGTTTaGCTAGTCAGACAGGATATG +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATLRFCV*LVRQDM
Trigger: CATATCCTGTCTGACTAGCAAAACGCAGAACCTTAA...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGTGACGGTGTTCCTGCAGTTGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGGTGGCTATTCAAAGTTaGTATAGCAACCACTTAAGC +
Preference number: 5 (lower is better)
Translates to: RDGVPAVVQPRGEAGRGGVAIQS*YSNHLS
Trigger: GCTTAAGTGGTTGCTATACAAACTTTGAATAGCCAC...CCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS CCA 90 bp TCCTGCCCCAGTAGTTGGATTGCCATTCCGCAGATGTCACCGCATTaGCTCTCACAACTAGAAGGGGATGAGGCTGCAATGAGGATGAAG +
Preference number: 5 (lower is better)
Translates to: SCPSSWIAIPQMSPH*LSQLEGDEAAMRMK
Trigger: CTTCATCCTCATTGCAGCCTCATCCCCTTCTAGTTGTGAGAGCCAATGCGGTGACATCTGCGGAATGGCAATCCAACTACTGGGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518957.1
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGAGATATTCACACATTaGGAGCTGAAAGAGGCGCCT +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNEIFTH*ELKEAP
Trigger: AGGCGCCTCTTTCAGCTCCAAATGTGTGAATATCTC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGTGAGAAGGTTCAACTaGGCTGGTTGCCTGTTAGAT +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRVRRFN*AGCLLD
Trigger: ATCTAACAGGCAACCAGCCAAGTTGAACCTTCTCAC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGTACAGTCATATCACTaGAAGGGGTGGGTTTTGGTG +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRVQSYH*KGWVLV
Trigger: CACCAAAACCCACCCCTTCAAGTGATATGACTGTAC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACACGTGGACGTGTGGATaGAACTTTCCAGATTTAGCC +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNTWTCG*NFPDLA
Trigger: GGCTAAATCTGGAAAGTTCAATCCACACGTCCACGT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTCGGATAGGGTTCTCTaGTGTCCGGGTGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPSDRVL*CPGGGG
Trigger: TCCCCCACCACCCGGACACAAGAGAACCCTATCCGA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGAACTGCGCCTTTGTTaGGGGGCCCATGAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKELRLC*GAHEVV
Trigger: CACTACCTCATGGGCCCCCAAACAAAGGCGCAGTTC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGGCCAAGGGCAGTCTTaGCAGAACTGGTGCTCGACT +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKGQGQS*QNWCST
Trigger: AGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTCCAGGTGGTGGCTTTaGTGGCAACTCTGCCAACTG +
Preference number: 5 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVSRWWL*WQLCQL
Trigger: CAGTTGGCAGAGTTGCCACAAAAGCCACCACCTGGA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGGGGTTGGGTTGGGAGTaGTGCTTCTGTGAAATTAAC +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRGLGWE*CFCEIN
Trigger: GTTAATTTCACAGAAGCACAACTCCCAACCCAACCC...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS CCA 90 bp TCTGGTCCGGCATCCGATTCCATAGTGAATCTCTCGACGAAAAACTaGAGAGCCTGGAGGCTGAAGATCTCATGTCTCAGCCGTCACATC +
Preference number: 5 (lower is better)
Translates to: SGPASDSIVNLSTKN*RAWRLKISCLSRHI
Trigger: GATGTGACGGCTGAGACATGAGATCTTCAGCCTCCAGGCTCTCCAGTTTTTCGTCGAGAGATTCACTATGGAATCGGATGCCGGACCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518721.6
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTTCTTGAGATCTCCTTaGACTCCCTTTAGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNFLRSP*TPFRSP
Trigger: AGGAGACCTAAAGGGAGTCAAAGGAGATCTCAAGAA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCAGATCCACACCCTTTTaGGTCTTGATTTCATTAACT +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATRSTPF*VLISLT
Trigger: AGTTAATGAAATCAAGACCAAAAAGGGTGTGGATCT...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGGCATTAGGTTTTACTaGGCAGGTGAGAAGGTTCAA +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNGIRFY*AGEKVQ
Trigger: TTGAACCTTCTCACCTGCCAAGTAAAACCTAATGCC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GATGCCAAGGATGGCTTTGGCAAACCAGTAAGGCGCGCCGGGTCCGAGGCTACCCCTCTTCTTTGCTATTaGTCAATACTGATATCCATG +
Preference number: 5 (lower is better)
Translates to: DAKDGFGKPVRRAGSEATPLLCY*SILISM
Trigger: CATGGATATCAGTATTGACAAATAGCAAAGAAGAGG...GGTAGCCTCGGACCCGGCGCGCCTTACTGGTTTGCCAAAGCCATCCTTGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGTGCAGCAGTAAATCCCTGGATTaGATGGCCTCAAGCAATTCA +
Preference number: 5 (lower is better)
Translates to: SWSRASSSSVTVFLQLCSSKSLD*MASSNS
Trigger: TGAATTGCTTGAGGCCATCAAATCCAGGGATTTACT...GCTGCACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACCAGGTTCCCACAGTTTaGTACAAGGAAGTCAACCAA +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNQVPTV*YKEVNQ
Trigger: TTGGTTGACTTCCTTGTACAAAACTGTGGGAACCTG...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTTGATAGGGCTTGGTTaGTCATCCAGATCATCATCG +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNLIGLG*SSRSSS
Trigger: CGATGATGATCTGGATGACAAACCAAGCCCTATCAA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGAGCAGATTTTTCAGCAGTCGGATAGGGTTCTCTaGTGTCCGGGTGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: IQGEDHIVAQTLEQIFQQSDRVL*CPGGGG
Trigger: TCCCCCACCACCCGGACACAAGAGAACCCTATCCGA...CTGCTGAAAAATCTGCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATCTGAGAGTTGGGGTTaGGGTGGCAGGTCCCCCAGC +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTSESWG*GGRSPS
Trigger: GCTGGGGGACCTGCCACCCAAACCCCAACTCTCAGA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAACTCCAGTCTGGGATTTaGCTAGCAGGTCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKLQSGI*LAGLPA
Trigger: AGCTGGGAGACCTGCTAGCAAAATCCCAGACTGGAG...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TTCATCTGTGGTTTGGGAGGTAAGTCTGAGAGTTGGGGTTTGGGTGGCAGGTCCGGAGTCTTCAGATGCTaGCTTTTGGATGGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: FICGLGGKSESWGLGGRSGVFRC*LLDGVS
Trigger: AGAGACGCCATCCAAAAGCAAGCATCTGAAGACTCC...GGACCTGCCACCCAAACCCCAACTCTCAGACTTACCTCCCAAACCACAGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTATGCCTTTCAACGGTaGCTGGAGACCACTTCTATT +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRYAFQR*LETTSI
Trigger: AATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCATA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGGTGGGAAAAGAAACACTaGGTTTCAGCACCTGGATTC +
Preference number: 5 (lower is better)
Translates to: GRTLGPRAVFAELVLDCWWEKKH*VSAPGF
Trigger: GAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCA...CCAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp TCTTGGTCTAGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGTGCAGCCTTCTCCCCTTCAGTTaGAATATCCTCTCAATGCAA +
Preference number: 5 (lower is better)
Translates to: SWSRASSSSVTVFLQLCSLLPFS*NILSMQ
Trigger: TTGCATTGAGAGGATATTCAAACTGAAGGGGAGAAG...GCTGCACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCTAGACCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520927.5
CDS CCA 90 bp CCACCATCTTTGGGTCATCTTCGATCATCTTCCTGCCCCAGTAGTTaGATTGCCATTCCGCAGATGTCACCGCATTGGCTCTCACAACTA +
Preference number: 5 (lower is better)
Translates to: PPSLGHLRSSSCPSS*IAIPQMSPHWLSQL
Trigger: TAGTTGTGAGAGCCAATGCGGTGACATCTGCGGAATGGCAATCCAACTACTGGGGCAGGAAGATGATCGAAGATGACCCAAAGATGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518957.1
CDS-3UTR CAA 90 bp TTCATCTGTGGTTTGGGAGGTAAGTCTGAGAGTTGGGGTTTGGGTGGCAGGTCCGAGATATTCACACATTaGGAGCTGAAAGAGGCGCCT +
Preference number: 5 (lower is better)
Translates to: FICGLGGKSESWGLGGRSEIFTH*ELKEAP
Trigger: AGGCGCCTCTTTCAGCTCCAAATGTGTGAATATCTC...GGACCTGCCACCCAAACCCCAACTCTCAGACTTACCTCCCAAACCACAGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACAGTAAATCCCTGGATTaGATGGCCTCAAGCAATTCA +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNSKSLD*MASSNS
Trigger: TGAATTGCTTGAGGCCATCAAATCCAGGGATTTACT...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGGTGAGCGCTCTTTCTaGATAGGGCTTGGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVGERSF*IGLGLS
Trigger: TGACAAACCAAGCCCTATCAAGAAAGAGCGCTCACC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATTGAAGGTGGGCCAGTaGGACCTTTCCCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTLKVGQ*DLSRRS
Trigger: GGAACGCCGGGAAAGGTCCAACTGGCCCACCTTCAA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTGCTTAGAGGGAGTGTaGAAGGTGGGCCAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPCLEGV*KVGQLD
Trigger: GTCCAACTGGCCCACCTTCAACACTCCCTCTAAGCA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGGAGGAGGCCTCTTCTaGGATAGGGTGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTGGGLF*DRVELP
Trigger: TGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTCC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ACAGAGATCTGGTCCGGCATCCATTTCTGGGCCATAATCCTCTTTAAATTTGAACCAGTTCTGTGGGCTTaGGGGGCAGGTCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: TEIWSGIHFWAIILFKFEPVLWA*GAGLQV
Trigger: CACCTGGAGACCTGCCCCCAAAGCCCACAGAACTGG...TTCAAATTTAAAGAGGATTATGGCCCAGAAATGGATGCCGGACCAGATCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATCTCCAATTTGGGGCTaGGGGGCCAGTTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTSPIWG*GASSVG
Trigger: GCCCACAGAACTGGCCCCCAAGCCCCAAATTGGAGA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTCTGGACTGCACATTaGGGGATAGATCCAATGGGT +
Preference number: 5 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVLWTAH*GIDPMG
Trigger: ACCCATTGGATCTATCCCCAAATGTGCAGTCCAGAG...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTTAAGGTTCTGCGTTTaGCTAGTCAGACAGGATATG +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRLRFCV*LVRQDM
Trigger: CATATCCTGTCTGACTAGCAAAACGCAGAACCTTAA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTTCCTCATGCTCTGTTaGGTGTGGAAATTCACATGT +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRFLMLC*VWKFTC
Trigger: ACATGTGAATTTCCACACCAAACAGAGCATGAGGAA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTTCCTCATGCTCTGTTaGGTGTGGAAATTCACATGT +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNFLMLC*VWKFTC
Trigger: ACATGTGAATTTCCACACCAAACAGAGCATGAGGAA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS GCA 90 bp TATAGCAAGACTCCACCATCTTTGGGTCATCTTCGATCATCTTCCTaGCCCAGTAGTTGGATTGCCATTCCGCAGATGTCACCGCATTGG +
Preference number: 5 (lower is better)
Translates to: YSKTPPSLGHLRSSS*PSSWIAIPQMSPHW
Trigger: CCAATGCGGTGACATCTGCGGAATGGCAATCCAACTACTGGGGCAGGAAGATGATCGAAGATGACCCAAAGATGGTGGAGTCTTGCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518957.1
CDS-3UTR CAA 90 bp CTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCCTACGGTGTTCCTGCAGTaGTGCAGCCGCGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LLQTSSLSEGLFYLGLEPTVFLQ*CSRVVK
Trigger: CTTCACCACGCGGCTGCACAACTGCAGGAACACCGT...AGGCTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAAAGGTGAAGATCACATaGTGGCTCAAACCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKKVKIT*WLKPWS
Trigger: GCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTGTTTTCAAGCCATCTaGAAAGAAATTGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNCFQAI*KEIALC
Trigger: GCACAGTGCAATTTCTTTCAAGATGGCTTGAAAACA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GCAACCTCAGATGCAGACTTCCATCCGGACACTGGTGTGGCTTCAGTACCGAGGTGTTTTCAAGCCATCTaGAAAGAAATTGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: ATSDADFHPDTGVASVPRCFQAI*KEIALC
Trigger: GCACAGTGCAATTTCTTTCAAGATGGCTTGAAAACA...CCTCGGTACTGAAGCCACACCAGTGTCCGGATGGAAGTCTGCATCTGAGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TGGTACGGGCGTCTCTGGCAGAGTAGGCGTGAGGTCGTTGGAGTCTTCAGATGCCCTCTTCTTTGCTATTaGTCAATACTGATATCCATG +
Preference number: 5 (lower is better)
Translates to: WYGRLWQSRREVVGVFRCPLLCY*SILISM
Trigger: CATGGATATCAGTATTGACAAATAGCAAAGAAGAGG...GCATCTGAAGACTCCAACGACCTCACGCCTACTCTGCCAGAGACGCCCGTACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACGTTAGGGCCTCTTCTTaGCTATTTGTCAATACTGAT +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNVRASS*LFVNTD
Trigger: ATCAGTATTGACAAATAGCAAAGAAGAGGCCCTAAC...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGAAATACCCAAGTTGGTaGAAAGCCAGGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVKYPSW*KARWVL
Trigger: CAGAACCCACCTGGCTTTCAACCAACTTGGGTATTT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGAACTGCGCCTTTGTTaGGGGGCCCATGAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTELRLC*GAHEVV
Trigger: CACTACCTCATGGGCCCCCAAACAAAGGCGCAGTTC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACCAGTTCTGTGGGCTTaGGGGGCAGGTCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKPVLWA*GAGLQV
Trigger: CACCTGGAGACCTGCCCCCAAAGCCCACAGAACTGG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACACGGCAAATCTCCAATTaGGGGCTTGGGGGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTRQISN*GLGGQF
Trigger: GAACTGGCCCCCAAGCCCCAAATTGGAGATTTGCCG...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTCTGAGAGTTGGGGTTaGGGTGGCAGGTCCCCCAGC +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNSESWG*GGRSPS
Trigger: GCTGGGGGACCTGCCACCCAAACCCCAACTCTCAGA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTCCTTCATCTGTGGTTaGGGAGGTAAGTCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVSFICG*GGKSES
Trigger: ACTCTCAGACTTACCTCCCAAACCACAGATGAAGGA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTCAGATGCTTGCTTTaGGATGGCGTCTCTGGACTG +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKFRCLL*DGVSGL
Trigger: CAGTCCAGAGACGCCATCCAAAAGCAAGCATCTGAA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGGAGTCTTCAGATGCTaGCTTTTGGATGGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKGVFRC*LLDGVS
Trigger: AGAGACGCCATCCAAAAGCAAGCATCTGAAGACTCC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TGGGAGCCGCTGGACATCCTCAATAATGGCTTTTGTCAGGTCTTCCAGGCTGTTGGAGACCACTTCTATTaGCAAAGCCAGCAGTTCCTA +
Preference number: 5 (lower is better)
Translates to: WEPLDILNNGFCQVFQAVGDHFY*QSQQFL
Trigger: TAGGAACTGCTGGCTTTGCAAATAGAAGTGGTCTCC...AACAGCCTGGAAGACCTGACAAAAGCCATTATTGAGGATGTCCAGCGGCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS CCA 90 bp GCATCCGATTCCATAGTGAATCTCTCGACGAAAAACTGGAGAGCCTaGAGGCTGAAGATCTCATGTCTCAGCCGTCACATCAGAAAACGA +
Preference number: 5 (lower is better)
Translates to: ASDSIVNLSTKNWRA*RLKISCLSRHIRKR
Trigger: TCGTTTTCTGATGTGACGGCTGAGACATGAGATCTTCAGCCTCCAGGCTCTCCAGTTTTTCGTCGAGAGATTCACTATGGAATCGGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518721.6
CDS-3UTR CAA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCAAGGTGAAGATCACATaGTGGCTCAAACCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPKVKIT*WLKPWS
Trigger: GCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTT...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CAA 90 bp GGAAGAACTCTTGGGCCAAGGGCAGTCTTTGCAGAACTGGTGCTCGACTGCTGGAGATCCACACCCTTTTaGGTCTTGATTTCATTAACT +
Preference number: 5 (lower is better)
Translates to: GRTLGPRAVFAELVLDCWRSTPF*VLISLT
Trigger: AGTTAATGAAATCAAGACCAAAAAGGGTGTGGATCT...CCAGCAGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCCCAAGAGTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGTCAGAATCCCATTCTaGACTGAACACTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKVRIPF*TEHFLL
Trigger: GAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGAC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGTGAGAAGGTTCAACTaGGCTGGTTGCCTGTTAGAT +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKVRRFN*AGCLLD
Trigger: ATCTAACAGGCAACCAGCCAAGTTGAACCTTCTCAC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACCCTCTTCTTTGCTATTaGTCAATACTGATATCCATG +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNPLLCY*SILISM
Trigger: CATGGATATCAGTATTGACAAATAGCAAAGAAGAGG...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAAAATACCCAAGTTGGTaGAAAGCCAGGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKKYPSW*KARWVL
Trigger: CAGAACCCACCTGGCTTTCAACCAACTTGGGTATTT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGTCAAAATACCCAAGTaGGTTGAAAGCCAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKVKIPK*VESQVG
Trigger: ACCCACCTGGCTTTCAACCAACTTGGGTATTTTGAC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCCGGACACTGGTGTGGCTTCAGTACCGAGGCTGCTAAAGCTGCCAGTCACAACTTGAACAGGTCTTCCTaGAAAACCTATGATCTACAT +
Preference number: 5 (lower is better)
Translates to: SGHWCGFSTEAAKAASHNLNRSS*KTYDLH
Trigger: ATGTAGATCATAGGTTTTCAAGGAAGACCTGTTCAA...GTTGTGACTGGCAGCTTTAGCAGCCTCGGTACTGAAGCCACACCAGTGTCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCATATCCACAGTGGGCTaGCTCCTGAGCAAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPISTVG*LLSKSF
Trigger: GAAGCTTTTGCTCAGGAGCAAGCCCACTGTGGATAT...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAACGTGGACGTGTGGATaGAACTTTCCAGATTTAGCC +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKTWTCG*NFPDLA
Trigger: GGCTAAATCTGGAAAGTTCAATCCACACGTCCACGT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTTGATAGGGCTTGGTTaGTCATCCAGATCATCATCG +
Preference number: 5 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVLIGLG*SSRSSS
Trigger: CGATGATGATCTGGATGACAAACCAAGCCCTATCAA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTTGAAGGTGGGCCAGTaGGACCTTTCCCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLKVGQ*DLSRRS
Trigger: GGAACGCCGGGAAAGGTCCAACTGGCCCACCTTCAA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp ACAGAGATCTGGTCCGGCATCCATTTCTGGGCCATAATCCTCTTTAAATTTGAAGGCCAAGGGCAGTCTTaGCAGAACTGGTGCTCGACT +
Preference number: 5 (lower is better)
Translates to: TEIWSGIHFWAIILFKFEGQGQS*QNWCST
Trigger: AGTCGAGCACCAGTTCTGCAAAGACTGCCCTTGGCC...TTCAAATTTAAAGAGGATTATGGCCCAGAAATGGATGCCGGACCAGATCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp ATGGTCAGAATCCCATTCTTGACTGAACACTTCCTCCTCTGCCATACTTTCCGGCTCTGGACTGCACATTaGGGGATAGATCCAATGGGT +
Preference number: 5 (lower is better)
Translates to: MVRIPFLTEHFLLCHTFRLWTAH*GIDPMG
Trigger: ACCCATTGGATCTATCCCCAAATGTGCAGTCCAGAG...CCGGAAAGTATGGCAGAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGGAGTCTTCAGATGCTaGCTTTTGGATGGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPGVFRC*LLDGVS
Trigger: AGAGACGCCATCCAAAAGCAAGCATCTGAAGACTCC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAATGAAGGCAGCAGTCTaGCATGAAGGATGTGGACAA +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKMKAAV*HEGCGQ
Trigger: TTGTCCACATCCTTCATGCAAGACTGCTGCCTTCAT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS CCA 90 bp TCATTCCTGGATATCGATTCCATAGTGAATCTCTCGACGAAAAACTaGAGAGCCTGGAGGCTGAAGATCTCATGTCTCAGCCGTCACATC +
Preference number: 5 (lower is better)
Translates to: SFLDIDSIVNLSTKN*RAWRLKISCLSRHI
Trigger: GATGTGACGGCTGAGACATGAGATCTTCAGCCTCCAGGCTCTCCAGTTTTTCGTCGAGAGATTCACTATGGAATCGATATCCAGGAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTCTTGAGATCTCCTTaGACTCCCTTTAGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKFLRSP*TPFRSP
Trigger: AGGAGACCTAAAGGGAGTCAAAGGAGATCTCAAGAA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACACATGCTGTATCCTCCTaGCCGGCTCTGAGAATCTTC +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTHAVSS*PALRIF
Trigger: GAAGATTCTCAGAGCCGGCAAGGAGGATACAGCATG...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CAA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGTCAGAATCCCATTCTaGACTGAACACTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPVRIPF*TEHFLL
Trigger: GAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGAC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GTCTGCCTGGCAGTCATAAATGGTCTTCACTCGCCTCACTTTATTTTTCCCCGTGTCAAAATACCCAAGTaGGTTGAAAGCCAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: VCLAVINGLHSPHFIFPRVKIPK*VESQVG
Trigger: ACCCACCTGGCTTTCAACCAACTTGGGTATTTTGAC...ACGGGGAAAAATAAAGTGAGGCGAGTGAAGACCATTTATGACTGCCAGGCAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTGATAGGGCTTGGTTaGTCATCCAGATCATCATCG +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKLIGLG*SSRSSS
Trigger: CGATGATGATCTGGATGACAAACCAAGCCCTATCAA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TTTTTGTCTTCGGCATTAGGTTTTACTTGGCAGGTGAGAAGGTTCAACTTGGCTTGCTTAGAGGGAGTGTaGAAGGTGGGCCAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: FLSSALGFTWQVRRFNLACLEGV*KVGQLD
Trigger: GTCCAACTGGCCCACCTTCAACACTCCCTCTAAGCA...AGCCAAGTTGAACCTTCTCACCTGCCAAGTAAAACCTAATGCCGAAGACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp TTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGGAACTGCGCCTTTGTTaGGGGGCCCATGAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: LLLQTSSLSEGLFYLGLEELRLC*GAHEVV
Trigger: CACTACCTCATGGGCCCCCAAACAAAGGCGCAGTTC...CTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACGGCAAATCTCCAATTaGGGGCTTGGGGGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKRQISN*GLGGQF
Trigger: GAACTGGCCCCCAAGCCCCAAATTGGAGATTTGCCG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATATATTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTCTGAGAGTTGGGGTTaGGGTGGCAGGTCCCCCAGC +
Preference number: 5 (lower is better)
Translates to: IYCFYRLLHFLKGCSILVSESWG*GGRSPS
Trigger: GCTGGGGGACCTGCCACCCAAACCCCAACTCTCAGA...GACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAATATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTCCTTCATCTGTGGTTaGGGAGGTAAGTCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPSFICG*GGKSES
Trigger: ACTCTCAGACTTACCTCCCAAACCACAGATGAAGGA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGAGCAGATTTTTCTCCAGTCTGGGATTTaGCTAGCAGGTCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: QRIQGEDHIVAQTLEQIFLQSGI*LAGLPA
Trigger: AGCTGGGAGACCTGCTAGCAAAATCCCAGACTGGAG...AAAAATCTGCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp ACAGAGATCTGGTCCGGCATCCATTTCTGGGCCATAATCCTCTTTAAATTTGAAGTAGGCGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: TEIWSGIHFWAIILFKFEVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACGCCTAC...TTCAAATTTAAAGAGGATTATGGCCCAGAAATGGATGCCGGACCAGATCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGACAGAACCCACCTCTTaGCTAATGTTGCATTTTCAG +
Preference number: 5 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVTEPTS*LMLHFQ
Trigger: CTGAAAATGCAACATTAGCAAAGAGGTGGGTTCTGT...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCGGGTTGGGTTGGGAGTaGTGCTTCTGTGAAATTAAC +
Preference number: 5 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPGLGWE*CFCEIN
Trigger: GTTAATTTCACAGAAGCACAACTCCCAACCCAACCC...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATGGTCAGAATCCCATTCTTGACTGAACACTTCCTCCTCTGCCATACTTTCCGGGGGTTGGGTTGGGAGTaGTGCTTCTGTGAAATTAAC +
Preference number: 5 (lower is better)
Translates to: MVRIPFLTEHFLLCHTFRGLGWE*CFCEIN
Trigger: GTTAATTTCACAGAAGCACAACTCCCAACCCAACCC...CCGGAAAGTATGGCAGAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS GCA 90 bp CCTTCTTTTCACTGCCATATTCCTTATTGCCCTGGAGCTGATGCATaGTGTATCCTCCTTGCCGGCTCTGAGAATCCTAGGAAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: PSFHCHIPYCPGADA*CILLAGSENPRKEK
Trigger: TTTTTCTTTCCTAGGATTCTCAGAGCCGGCAAGGAGGATACAGCATGCATCAGCTCCAGGGCAATAAGGAATATGGCAGTGAAAAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524018.1
CDS CCA 90 bp GATATCGATTCCATAGTGAATCTCTCGACGAAAAACTGGAGAGCCTaGAGGCTGAAGATCTCATGTCTCAGCCGTCACATCAGAAAACGA +
Preference number: 5 (lower is better)
Translates to: DIDSIVNLSTKNWRA*RLKISCLSRHIRKR
Trigger: TCGTTTTCTGATGTGACGGCTGAGACATGAGATCTTCAGCCTCCAGGCTCTCCAGTTTTTCGTCGAGAGATTCACTATGGAATCGATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000520927.5
ENST00000524299.1
CDS-3UTR CAA 90 bp CAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCCTCCTCCATTCTTGAGATCTCCTTaGACTCCCTTTAGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: QTSSLSEGLFYLGLEPPPFLRSP*TPFRSP
Trigger: AGGAGACCTAAAGGGAGTCAAAGGAGATCTCAAGAA...TGGAGGAGGCTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR CAA 90 bp TCCTTTGTAAGAGTAGAAAACTTGACAAACGCGGTGCCAAGGTCGGGGTTGTCTTTGTCAAATGGCTTCTaGAGATCTCCTTTGACTCCC +
Preference number: 5 (lower is better)
Translates to: SFVRVENLTNAVPRSGLSLSNGF*RSPLTP
Trigger: GGGAGTCAAAGGAGATCTCAAGAAGCCATTTGACAA...AGACAACCCCGACCTTGGCACCGCGTTTGTCAAGTTTTCTACTCTTACAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR CAA 90 bp CTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCCTCATGCTGTATCCTCCTaGCCGGCTCTGAGAATCTTC +
Preference number: 5 (lower is better)
Translates to: LLQTSSLSEGLFYLGLEPHAVSS*PALRIF
Trigger: GAAGATTCTCAGAGCCGGCAAGGAGGATACAGCATG...AGGCTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGTTCAACTTGGCTGGTaGCCTGTTAGATGTGGCATG +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTVQLGW*PVRCGM
Trigger: CATGCCACATCTAACAGGCAACCAGCCAAGTTGAAC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTGTTTCCTACATTCTaGGCCAGCAAGAGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKLFPTF*ASKSSE
Trigger: TTCTGAACTCTTGCTGGCCAAGAATGTAGGAAACAA...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGAGCAGATTTTTCAGCAGGTACAGTCATATCACTaGAAGGGGTGGGTTTTGGTG +
Preference number: 5 (lower is better)
Translates to: IQGEDHIVAQTLEQIFQQVQSYH*KGWVLV
Trigger: CACCAAAACCCACCCCTTCAAGTGATATGACTGTAC...CTGCTGAAAAATCTGCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAAGTAAATCCCTGGATTaGATGGCCTCAAGCAATTCA +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKSKSLD*MASSNS
Trigger: TGAATTGCTTGAGGCCATCAAATCCAGGGATTTACT...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGGTGAGCGCTCTTTCTaGATAGGGCTTGGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTGERSF*IGLGLS
Trigger: TGACAAACCAAGCCCTATCAAGAAAGAGCGCTCACC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTGCTTAGAGGGAGTGTaGAAGGTGGGCCAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNCLEGV*KVGQLD
Trigger: GTCCAACTGGCCCACCTTCAACACTCCCTCTAAGCA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATGCTTAGAGGGAGTGTaGAAGGTGGGCCAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKCLEGV*KVGQLD
Trigger: GTCCAACTGGCCCACCTTCAACACTCCCTCTAAGCA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTCCAGGTGGTGGCTTTaGTGGCAACTCTGCCAACTG +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNSRWWL*WQLCQL
Trigger: CAGTTGGCAGAGTTGCCACAAAAGCCACCACCTGGA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATTCAGATGCTTGCTTTaGGATGGCGTCTCTGGACTG +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTFRCLL*DGVSGL
Trigger: CAGTCCAGAGACGCCATCCAAAAGCAAGCATCTGAA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGTAGGCGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACGCCTAC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGTAGGCGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACGCCTAC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGGTGGCTATTCAAAGTTaGTATAGCAACCACTTAAGC +
Preference number: 5 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVVAIQS*YSNHLS
Trigger: GCTTAAGTGGTTGCTATACAAACTTTGAATAGCCAC...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCCTAAGGTGAAGATCACATaGTGGCTCAAACCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: LLQTSSLSEGLFYLGLEPKVKIT*WLKPWS
Trigger: GCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTT...AGGCTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR CAA 90 bp ACAGAGATCTGGTCCGGCATCCATTTCTGGGCCATAATCCTCTTTAAATTTGAAAAGGTGAAGATCACATaGTGGCTCAAACCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: TEIWSGIHFWAIILFKFEKVKIT*WLKPWS
Trigger: GCTCCAGGGTTTGAGCCACAATGTGATCTTCACCTT...TTCAAATTTAAAGAGGATTATGGCCCAGAAATGGATGCCGGACCAGATCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCATGCTGTATCCTCCTaGCCGGCTCTGAGAATCTTC +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNHAVSS*PALRIF
Trigger: GAAGATTCTCAGAGCCGGCAAGGAGGATACAGCATG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000518721.6
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGTCAAAATACCCAAGTaGGTTGAAAGCCAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTVKIPK*VESQVG
Trigger: ACCCACCTGGCTTTCAACCAACTTGGGTATTTTGAC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCCTCCTCCATTGTTTCCTACATTCTaGGCCAGCAAGAGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: QTSSLSEGLFYLGLEPPPLFPTF*ASKSSE
Trigger: TTCTGAACTCTTGCTGGCCAAGAATGTAGGAAACAA...TGGAGGAGGCTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp GAGCACTGTAACGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGTTGAACAGGTCTTCCTaGAAAACCTATGATCTACAT +
Preference number: 5 (lower is better)
Translates to: EHCNDGRGLFLRVGLGVVLNRSS*KTYDLH
Trigger: ATGTAGATCATAGGTTTTCAAGGAAGACCTGTTCAA...CACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCGTTACAGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATGGGCGAGTCTGTGCTaGTGGAAACGAAGATCTGGT +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKWASLC*WKRRSG
Trigger: ACCAGATCTTCGTTTCCACAAGCACAGACTCGCCCA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCCTTTGTAAGAGTAGAAAACTTGACAAACGCGGTGCCAAGGTCGGGGTTGTCTACAGAACCCACCTCTTaGCTAATGTTGCATTTTCAG +
Preference number: 5 (lower is better)
Translates to: SFVRVENLTNAVPRSGLSTEPTS*LMLHFQ
Trigger: CTGAAAATGCAACATTAGCAAAGAGGTGGGTTCTGT...AGACAACCCCGACCTTGGCACCGCGTTTGTCAAGTTTTCTACTCTTACAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp CGATGGAAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAAGTGGCTATTCAAAGTTaGTATAGCAACCACTTAAGC +
Preference number: 5 (lower is better)
Translates to: RWKRAFPKGWVGSCASVKVAIQS*YSNHLS
Trigger: GCTTAAGTGGTTGCTATACAAACTTTGAATAGCCAC...TTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTTCCATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp GGCCCTTCCATGAGTTTCTTACTCTGTAACAGCAGCTATATACACACTGTGCCCTTCCTCATGCTCTGTTaGGTGTGGAAATTCACATGT +
Preference number: 5 (lower is better)
Translates to: GPSMSFLLCNSSYIHTVPFLMLC*VWKFTC
Trigger: ACATGTGAATTTCCACACCAAACAGAGCATGAGGAA...GGGCACAGTGTGTATATAGCTGCTGTTACAGAGTAAGAAACTCATGGAAGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCATGCTGTATCCTCCTaGCCGGCTCTGAGAATCTCT +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNHAVSS*PALRIS
Trigger: AGAGATTCTCAGAGCCGGCAAGGAGGATACAGCATG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524124.5
CDS-3UTR CAA 90 bp TTTTTGTCTTCGGCATTAGGTTTTACTTGGCAGGTGAGAAGGTTCAACTTGGCTGTCAGAATCCCATTCTaGACTGAACACTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: FLSSALGFTWQVRRFNLAVRIPF*TEHFLL
Trigger: GAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGAC...AGCCAAGTTGAACCTTCTCACCTGCCAAGTAAAACCTAATGCCGAAGACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAGGCATTAGGTTTTACTaGGCAGGTGAGAAGGTTCAA +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTGIRFY*AGEKVQ
Trigger: TTGAACCTTCTCACCTGCCAAGTAAAACCTAATGCC...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCCTTTGTAAGAGTAGAAAACTTGACAAACGCGGTGCCAAGGTCGGGGTTGTCTGTTAGGGCCTCTTCTTaGCTATTTGTCAATACTGAT +
Preference number: 5 (lower is better)
Translates to: SFVRVENLTNAVPRSGLSVRASS*LFVNTD
Trigger: ATCAGTATTGACAAATAGCAAAGAAGAGGCCCTAAC...AGACAACCCCGACCTTGGCACCGCGTTTGTCAAGTTTTCTACTCTTACAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAATATCCACAGTGGGCTaGCTCCTGAGCAAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKISTVG*LLSKSF
Trigger: GAAGCTTTTGCTCAGGAGCAAGCCCACTGTGGATAT...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp AGATCTCCTTTGACTCCCTTTAGGTCTCCTTTTAACAAAGAATCCAAGGTGAAGATATCCACAGTGGGCTaGCTCCTGAGCAAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: RSPLTPFRSPFNKESKVKISTVG*LLSKSF
Trigger: GAAGCTTTTGCTCAGGAGCAAGCCCACTGTGGATAT...CTTCACCTTGGATTCTTTGTTAAAAGGAGACCTAAAGGGAGTCAAAGGAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGGTGAGCGCTCTTTCTaGATAGGGCTTGGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKGERSF*IGLGLS
Trigger: TGACAAACCAAGCCCTATCAAGAAAGAGCGCTCACC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCATTAAAACTATTGTTTCCTACATTCTTGGCCAGCAAGAGTTCAGAAGTTCCTTCCAGGTGGTGGCTTTaGTGGCAACTCTGCCAACTG +
Preference number: 5 (lower is better)
Translates to: SLKLLFPTFLASKSSEVPSRWWL*WQLCQL
Trigger: CAGTTGGCAGAGTTGCCACAAAAGCCACCACCTGGA...AGGAACTTCTGAACTCTTGCTGGCCAAGAATGTAGGAAACAATAGTTTTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACCTCTGGACTGCACATTaGGGGATAGATCCAATGGGT +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLWTAH*GIDPMG
Trigger: ACCCATTGGATCTATCCCCAAATGTGCAGTCCAGAG...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGGAGTCTTCAGATGCTaGCTTTTGGATGGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNGVFRC*LLDGVS
Trigger: AGAGACGCCATCCAAAAGCAAGCATCTGAAGACTCC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATGGGAAAAGAAACACTaGGTTTCAGCACCTGGATTC +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTWEKKH*VSAPGF
Trigger: GAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS GCA 90 bp GGCCTTCCTTCCTCTAGGCTGGAAACAATTTCAGACTTGGATTCTTaGATTTATTTTGTTCTCCCATCTATTCCAGGTAGTCGTCTAGCA +
Preference number: 5 (lower is better)
Translates to: GLPSSRLETISDLDS*IYFVLPSIPGSRLA
Trigger: TGCTAGACGACTACCTGGAATAGATGGGAGAACAAAATAAATGCAAGAATCCAAGTCTGAAATTGTTTCCAGCCTAGAGGAAGGAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520625.1
CDS-3UTR CAA 90 bp CTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCCTTTGTCAAATGGCTTCTaGAGATCTCCTTTGACTCCC +
Preference number: 5 (lower is better)
Translates to: LLQTSSLSEGLFYLGLEPLSNGF*RSPLTP
Trigger: GGGAGTCAAAGGAGATCTCAAGAAGCCATTTGACAA...AGGCTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520927.5
ENST00000521075.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATCATCCCATGTTGTTTaGCGTGCTCTCTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTSSHVV*RALFSL
Trigger: AAGAGAAAAGAGAGCACGCAAAACAACATGGGATGA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGCGGATCATCCCATGTaGTTTTGCGTGCTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKADHPM*FCVLSF
Trigger: AAAAGAGAGCACGCAAAACAACATGGGATGATCCGC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGTCAGAATCCCATTCTaGACTGAACACTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNVRIPF*TEHFLL
Trigger: GAGGAGGAAGTGTTCAGTCAAGAATGGGATTCTGAC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACAAATACCCAAGTTGGTaGAAAGCCAGGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNKYPSW*KARWVL
Trigger: CAGAACCCACCTGGCTTTCAACCAACTTGGGTATTT...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATTGTTTCCTACATTCTaGGCCAGCAAGAGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTLFPTF*ASKSSE
Trigger: TTCTGAACTCTTGCTGGCCAAGAATGTAGGAAACAA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGTACAGTCATATCACTaGAAGGGGTGGGTTTTGGTG +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNVQSYH*KGWVLV
Trigger: CACCAAAACCCACCCCTTCAAGTGATATGACTGTAC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAGTACAGTCATATCACTaGAAGGGGTGGGTTTTGGTG +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKVQSYH*KGWVLV
Trigger: CACCAAAACCCACCCCTTCAAGTGATATGACTGTAC...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp TCTCCTTTTAACAAAGAATCCAAGGTGAAGATCACATTGTGGCTCAAACCCTGGCAGGTTCCCACAGTTTaGTACAAGGAAGTCAACCAA +
Preference number: 5 (lower is better)
Translates to: SPFNKESKVKITLWLKPWQVPTV*YKEVNQ
Trigger: TTGGTTGACTTCCTTGTACAAAACTGTGGGAACCTG...CCAGGGTTTGAGCCACAATGTGATCTTCACCTTGGATTCTTTGTTAAAAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTCCTTCATCTGTGGTTaGGGAGGTAAGTCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNSFICG*GGKSES
Trigger: ACTCTCAGACTTACCTCCCAAACCACAGATGAAGGA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATTAAGGTTCTGCGTTTaGCTAGTCAGACAGGATATG +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTLRFCV*LVRQDM
Trigger: CATATCCTGTCTGACTAGCAAAACGCAGAACCTTAA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp CTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCCTTATGCCTTTCAACGGTaGCTGGAGACCACTTCTATT +
Preference number: 5 (lower is better)
Translates to: LLQTSSLSEGLFYLGLEPYAFQR*LETTSI
Trigger: AATAGAAGTGGTCTCCAGCAACCGTTGAAAGGCATA...AGGCTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS CCA 90 bp TCCAAGAAGGCCTTCCTTCCTCTAGGCTGGAAACAATTTCAGACTTaGATTCTTGCATTTATTTTGTTCTCCCATCTATTCCAGGTAGTC +
Preference number: 5 (lower is better)
Translates to: SKKAFLPLGWKQFQT*ILAFILFSHLFQVV
Trigger: GACTACCTGGAATAGATGGGAGAACAAAATAAATGCAAGAATCCAAGTCTGAAATTGTTTCCAGCCTAGAGGAAGGAAGGCCTTCTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520625.1
CDS CCA 90 bp CCAAGTCACTCTGCATCTGGAAAATTCTGTGACTTGGAACAAATATaGCCCATGCTAGTTGAGCTAATTAAGCTCTCTGAGACTCAGTTA +
Preference number: 5 (lower is better)
Translates to: PSHSASGKFCDLEQI*PMLVELIKLSETQL
Trigger: TAACTGAGTCTCAGAGAGCTTAATTAGCTCAACTAGCATGGGCCATATTTGTTCCAAGTCACAGAATTTTCCAGATGCAGAGTGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520625.1
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTTCTTGAGATCTCCTTaGACTCCCTTTAGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNFLRSP*TPFRSP
Trigger: AGGAGACCTAAAGGGAGTCAAAGGAGATCTCAAGAA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000518721.6
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTTGTCAAATGGCTTCTaGAGATCTCCTTTGACTCCC +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLSNGF*RSPLTP
Trigger: GGGAGTCAAAGGAGATCTCAAGAAGCCATTTGACAA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000518721.6
CDS-3UTR CAA 90 bp ATATATTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCGTTCAACTTGGCTGGTaGCCTGTTAGATGTGGCATG +
Preference number: 5 (lower is better)
Translates to: IYCFYRLLHFLKGCSILVVQLGW*PVRCGM
Trigger: CATGCCACATCTAACAGGCAACCAGCCAAGTTGAAC...GACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAACAGGTTCCCACAGTTTaGTACAAGGAAGTCAACCAA +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKQVPTV*YKEVNQ
Trigger: TTGGTTGACTTCCTTGTACAAAACTGTGGGAACCTG...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ACAATCTTAAGGTTCTGCGTTTTGCTAGTCAGACAGGATATGAACAAAGGACACTTGATAGGGCTTGGTTaGTCATCCAGATCATCATCG +
Preference number: 5 (lower is better)
Translates to: TILRFCVLLVRQDMNKGHLIGLG*SSRSSS
Trigger: CGATGATGATCTGGATGACAAACCAAGCCCTATCAA...GTGTCCTTTGTTCATATCCTGTCTGACTAGCAAAACGCAGAACCTTAAGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp ATTTTTCAGCAGTGTGGACAGTTCCTTTGTAAGAGTAGAAAACTTGACAAACGCTCCTTCATCTGTGGTTaGGGAGGTAAGTCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: IFQQCGQFLCKSRKLDKRSFICG*GGKSES
Trigger: ACTCTCAGACTTACCTCCCAAACCACAGATGAAGGA...GCGTTTGTCAAGTTTTCTACTCTTACAAAGGAACTGTCCACACTGCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTGGGAAAAGAAACACTaGGTTTCAGCACCTGGATTC +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNWEKKH*VSAPGF
Trigger: GAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS CCA 90 bp TTTGCGCCAATTTTTACTGCTGAGTACATAATCGTGTTTGCTTTCTaGCCCATGAGGCAGGGTAAATTAAGAAACATACTTACTGTGGCA +
Preference number: 5 (lower is better)
Translates to: FAPIFTAEYIIVFAF*PMRQGKLRNILTVA
Trigger: TGCCACAGTAAGTATGTTTCTTAATTTACCCTGCCTCATGGGCCAGAAAGCAAACACGATTATGTACTCAGCAGTAAAAATTGGCGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524018.1
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACAAGATCCACACCCTTTTaGGTCTTGATTTCATTAACT +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTRSTPF*VLISLT
Trigger: AGTTAATGAAATCAAGACCAAAAAGGGTGTGGATCT...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp AAGAGGGCTTTTCCTAAGGGTTGGGTTGGGAGTTGTGCTTCTGTGAAATTAACATTGAACAGGTCTTCCTaGAAAACCTATGATCTACAT +
Preference number: 5 (lower is better)
Translates to: KRAFPKGWVGSCASVKLTLNRSS*KTYDLH
Trigger: ATGTAGATCATAGGTTTTCAAGGAAGACCTGTTCAA...TGTTAATTTCACAGAAGCACAACTCCCAACCCAACCCTTAGGAAAAGCCCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTTAAGGTTCTGCGTTTaGCTAGTCAGACAGGATATG +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLRFCV*LVRQDM
Trigger: CATATCCTGTCTGACTAGCAAAACGCAGAACCTTAA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAACAGAACCCACCTCTTaGCTAATGTTGCATTTTCAG +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKTEPTS*LMLHFQ
Trigger: CTGAAAATGCAACATTAGCAAAGAGGTGGGTTCTGT...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAATGTTTTCAAGCCATCTaGAAAGAAATTGCACTGTGC +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKCFQAI*KEIALC
Trigger: GCACAGTGCAATTTCTTTCAAGATGGCTTGAAAACA...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACGTTAGGGCCTCTTCTTaGCTATTTGTCAATACTGAT +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNVRASS*LFVNTD
Trigger: ATCAGTATTGACAAATAGCAAAGAAGAGGCCCTAAC...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp ATGGGAAAAGAAACACTTGGTTTCAGCACCTGGATTCTACATACAGTAGGGAAAAGATCCACACCCTTTTaGGTCTTGATTTCATTAACT +
Preference number: 5 (lower is better)
Translates to: MGKETLGFSTWILHTVGKRSTPF*VLISLT
Trigger: AGTTAATGAAATCAAGACCAAAAAGGGTGTGGATCT...TTTCCCTACTGTATGTAGAATCCAGGTGCTGAAACCAAGTGTTTCTTTTCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000521075.5
ENST00000524124.5
CDS-3UTR CAA 90 bp ATCCAGATGAGAATTCGGCATTTAACTAGTGGCACTACAGGATTCCTATACAACTTGAACAGGTCTTCCTaGAAAACCTATGATCTACAT +
Preference number: 5 (lower is better)
Translates to: IQMRIRHLTSGTTGFLYNLNRSS*KTYDLH
Trigger: ATGTAGATCATAGGTTTTCAAGGAAGACCTGTTCAA...GTTGTATAGGAATCCTGTAGTGCCACTAGTTAAATGCCGAATTCTCATCTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524124.5
CDS-3UTR CAA 90 bp TCATTAAAACTATTGTTTCCTACATTCTTGGCCAGCAAGAGTTCAGAAGTTCCTTTCCTCATGCTCTGTTaGGTGTGGAAATTCACATGT +
Preference number: 5 (lower is better)
Translates to: SLKLLFPTFLASKSSEVPFLMLC*VWKFTC
Trigger: ACATGTGAATTTCCACACCAAACAGAGCATGAGGAA...AGGAACTTCTGAACTCTTGCTGGCCAAGAATGTAGGAAACAATAGTTTTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521075.5
CDS-3UTR CAA 90 bp TTGCTTTTACAGACTTCTTCACTTTCTGAAGGGCTGTTCTATCTTGGTCTAGAGCATCAGAAAACGACATaGTTCCTTTTTCATCCTTCA +
Preference number: 5 (lower is better)
Translates to: LLLQTSSLSEGLFYLGLEHQKTT*FLFHPS
Trigger: TGAAGGATGAAAAAGGAACAATGTCGTTTTCTGATG...CTCTAGACCAAGATAGAACAGCCCTTCAGAAAGTGAAGAAGTCTGTAAAAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520927.5
CDS TCA 90 bp CATTTCTGGGCCATAATCCTCTTTAAATTTGAAACCATGCCTCAGTaGAAACCATCTGCACCTCTCATTTTCTCAAATACTCTGAAAATC +
Preference number: 5 (lower is better)
Translates to: HFWAIILFKFETMPQ*KPSAPLIFSNTLKI
Trigger: GATTTTCAGAGTATTTGAGAAAATGAGAGGTGCAGATGGTTTTCACTGAGGCATGGTTTCAAATTTAAAGAGGATTATGGCCCAGAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357668.2
ENST00000520625.1
ENST00000520927.5
ENST00000521075.5
ENST00000521426.5
ENST00000524299.1
CDS CCA 72 bp CATCGCGGGTTCGGCCGGGCGCTCGCGGCTCTCGGGTaGGAAAGCGAACTGCGACCGGGAAGCGCCGGCTGG +
Preference number: 6 (lower is better)
Translates to: HRGFGRALAALG*ESELRPGSAGW
Trigger: CCAGCCGGCGCTTCCCGGTCGCAGTTCGCTTTCCCACCCGAGAGCCGCGAGCGCCCGGCCGAACCCGCGATG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357668.2
ENST00000518721.6
CDS CCA 72 bp GTCACATCAGAAAACGACCGGGACCTGGCGGGCCGCTaGGCATTATTCCATCGCGGGTTCGGCCGGGCGCTC +
Preference number: 6 (lower is better)
Translates to: VTSENDRDLAGR*ALFHRGFGRAL
Trigger: GAGCGCCCGGCCGAACCCGCGATGGAATAATGCCCAGCGGCCCGCCAGGTCCCGGTCGTTTTCTGATGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000524299.1
CDS TCA 72 bp CAAGCAATTGGCGGGGGCCAAGGTGTGGGAACTGCTTaGGCCCATGAGTTCAAGAACAGCCTGGGAAGTATA +
Preference number: 6 (lower is better)
Translates to: QAIGGGQGVGTA*AHEFKNSLGSI
Trigger: TATACTTCCCAGGCTGTTCTTGAACTCATGGGCTCAAGCAGTTCCCACACCTTGGCCCCCGCCAATTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518957.1
CDS GCA 72 bp CACTGCCATATTCCTTATTGCCCTGGAGCTGATGCATaGTGTATCCTCCTTGCCGGCTCTGAGAATCCTAGG +
Preference number: 6 (lower is better)
Translates to: HCHIPYCPGADA*CILLAGSENPR
Trigger: CCTAGGATTCTCAGAGCCGGCAAGGAGGATACAGCATGCATCAGCTCCAGGGCAATAAGGAATATGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524018.1
CDS GCA 72 bp CACTGCCATATTCCTTATTGCCCTGGAGCTGATGCATaGTGTATCCTCCTTGCCGGCTCTGAGAATCTCTCC +
Preference number: 6 (lower is better)
Translates to: HCHIPYCPGADA*CILLAGSENLS
Trigger: GGAGAGATTCTCAGAGCCGGCAAGGAGGATACAGCATGCATCAGCTCCAGGGCAATAAGGAATATGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524124.5
CDS CCA 72 bp TTGGGTCATCTTCGATCATCTTCCTGCCCCAGTAGTTaGATTGCCATTCCGCAGATGTCACCGCATTGGCTC +
Preference number: 6 (lower is better)
Translates to: LGHLRSSSCPSS*IAIPQMSPHWL
Trigger: GAGCCAATGCGGTGACATCTGCGGAATGGCAATCCAACTACTGGGGCAGGAAGATGATCGAAGATGACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518957.1
CDS CAA 72 bp GTCATCTTCGATCATCTTCCTGCCCCAGTAGTTGGATaGCCATTCCGCAGATGTCACCGCATTGGCTCTCAC +
Preference number: 6 (lower is better)
Translates to: VIFDHLPAPVVG*PFRRCHRIGSH
Trigger: GTGAGAGCCAATGCGGTGACATCTGCGGAATGGCAATCCAACTACTGGGGCAGGAAGATGATCGAAGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518957.1
CDS TCA 72 bp TCAATTATCTCGCTGCTGATGAAAAGGCAGGAGCGATaGAGACTTAGGGAGCTCACTGCAGCCAGTCGTGCT +
Preference number: 6 (lower is better)
Translates to: SIISLLMKRQER*RLRELTAASRA
Trigger: AGCACGACTGGCTGCAGTGAGCTCCCTAAGTCTTCATCGCTCCTGCCTTTTCATCAGCAGCGAGATAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521426.5
CDS CCA 72 bp AGTAGTTGGATTGCCATTCCGCAGATGTCACCGCATTaGCTCTCACAACTAGAAGGGGATGAGGCTGCAATG +
Preference number: 6 (lower is better)
Translates to: SSWIAIPQMSPH*LSQLEGDEAAM
Trigger: CATTGCAGCCTCATCCCCTTCTAGTTGTGAGAGCCAATGCGGTGACATCTGCGGAATGGCAATCCAACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518957.1
CDS TCA 72 bp TTAAGCTCTCTGAGACTCAGTTACCCCATGGAGCACTaGCAACACACGGCACTTAGGCTTCACTCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: LSSLRLSYPMEH*QHTALRLHSKK
Trigger: CTTCTTGGAGTGAAGCCTAAGTGCCGTGTGTTGTCAGTGCTCCATGGGGTAACTGAGTCTCAGAGAGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520625.1
CDS CCA 72 bp TCCATAGTGAATCTCTCGACGAAAAACTGGAGAGCCTaGAGGCTGAAGATCTCATGTCTCAGCCGTCACATC +
Preference number: 6 (lower is better)
Translates to: SIVNLSTKNWRA*RLKISCLSRHI
Trigger: GATGTGACGGCTGAGACATGAGATCTTCAGCCTCCAGGCTCTCCAGTTTTTCGTCGAGAGATTCACTATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357668.2
ENST00000518721.6
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS CCA 72 bp GCATCCGATTCCATAGTGAATCTCTCGACGAAAAACTaGAGAGCCTGGAGGCTGAAGATCTCATGTCTCAGC +
Preference number: 6 (lower is better)
Translates to: ASDSIVNLSTKN*RAWRLKISCLS
Trigger: GCTGAGACATGAGATCTTCAGCCTCCAGGCTCTCCAGTTTTTCGTCGAGAGATTCACTATGGAATCGGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518721.6
CDS CAA 90 bp GCCATATTCCTTATTGCCCTGGAGCTGATGCATGCTGTATCCTCCTaGCCGGCTCTGAGAATCTCTCCTAGATTCTTTCTGATCCAGTTG +
Preference number: 6 (lower is better)
Translates to: AIFLIALELMHAVSS*PALRISPRFFLIQL
Trigger: CAACTGGATCAGAAAGAATCTAGGAGAGATTCTCAGAGCCGGCAAGGAGGATACAGCATGCATCAGCTCCAGGGCAATAAGGAATATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524124.5
CDS CCA 72 bp CTGAAAATCATTCCTGGATATCTCTGCCGTGGTCTGTaGCTCGGGAGTCTAACAGTCAATTATCTCGCTGCT +
Preference number: 6 (lower is better)
Translates to: LKIIPGYLCRGL*LGSLTVNYLAA
Trigger: AGCAGCGAGATAATTGACTGTTAGACTCCCGAGCCACAGACCACGGCAGAGATATCCAGGAATGATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521426.5
CDS CCA 72 bp GATATCGATTCCATAGTGAATCTCTCGACGAAAAACTaGAGAGCCTGGAGGCTGAAGATCTCATGTCTCAGC +
Preference number: 6 (lower is better)
Translates to: DIDSIVNLSTKN*RAWRLKISCLS
Trigger: GCTGAGACATGAGATCTTCAGCCTCCAGGCTCTCCAGTTTTTCGTCGAGAGATTCACTATGGAATCGATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357668.2
ENST00000520927.5
ENST00000521075.5
ENST00000524299.1
CDS CAA 90 bp GCCATATTCCTTATTGCCCTGGAGCTGATGCATGCTGTATCCTCCTaGCCGGCTCTGAGAATCCTAGGAAAGAAAAACTACAGATTAAAC +
Preference number: 6 (lower is better)
Translates to: AIFLIALELMHAVSS*PALRILGKKNYRLN
Trigger: GTTTAATCTGTAGTTTTTCTTTCCTAGGATTCTCAGAGCCGGCAAGGAGGATACAGCATGCATCAGCTCCAGGGCAATAAGGAATATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524018.1
CDS CAA 90 bp CTCCAAGAAGGCCTTCCTTCCTCTAGGCTGGAAACAATTTCAGACTaGGATTCTTGCATTTATTTTGTTCTCCCATCTATTCCAGGTAGT +
Preference number: 6 (lower is better)
Translates to: LQEGLPSSRLETISD*DSCIYFVLPSIPGS
Trigger: ACTACCTGGAATAGATGGGAGAACAAAATAAATGCAAGAATCCAAGTCTGAAATTGTTTCCAGCCTAGAGGAAGGAAGGCCTTCTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520625.1
CDS TCA 72 bp GCATGCTTCTTGAGGCTGACCAATCATTGCGATGAATaGCAAAATCTTTCCAAAGTCTTCAAGGGAATAAAA +
Preference number: 6 (lower is better)
Translates to: ACFLRLTNHCDE*QNLSKVFKGIK
Trigger: TTTTATTCCCTTGAAGACTTTGGAAAGATTTTGTCATTCATCGCAATGATTGGTCAGCCTCAAGAAGCATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524367.5
CDS TCA 72 bp GCCATAATCCTCTTTAAATTTGAAACCATGCCTCAGTaGAAACCATCTGCACCTCTCATTTTCTCAAATACT +
Preference number: 6 (lower is better)
Translates to: AIILFKFETMPQ*KPSAPLIFSNT
Trigger: AGTATTTGAGAAAATGAGAGGTGCAGATGGTTTTCACTGAGGCATGGTTTCAAATTTAAAGAGGATTATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357668.2
ENST00000520625.1
ENST00000520927.5
ENST00000521075.5
ENST00000521426.5
ENST00000524299.1