RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARSK (Homo sapiens)

Ensembl gene IDs: ENSG00000164291

Ensembl transcript IDs: ENST00000380009.9, ENST00000504763.1, ENST00000504873.5, ENST00000512106.1, ENST00000513814.5

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATATGGGTTTTAAGCCACTGATCAATTGCATTTTCATACTTCCTTaGTTCCTTCTGCCAGTCTTGGTGCCACCTAAGATTTGCTATAAC +
Preference number: 1 (lower is better)
Translates to: HMGFKPLINCIFILP*FLLPVLVPPKICYN
Trigger: GTTATAGCAAATCTTAGGTGGCACCAAGACTGGCAGAAGGAACCAAGGAAGTATGAAAATGCAATTGATCAGTGGCTTAAAACCCATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR TCA 90 bp TTCCTTCTGCCAGTCTTGGTGCCACCTAAGATTTGCTATAACGTTTaGATAATTCTGTCCTATACTTTGTTTCCACTTGATAAACTGCTC +
Preference number: 1 (lower is better)
Translates to: FLLPVLVPPKICYNV*IILSYTLFPLDKLL
Trigger: GAGCAGTTTATCAAGTGGAAACAAAGTATAGGACAGAATTATTCAAACGTTATAGCAAATCTTAGGTGGCACCAAGACTGGCAGAAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR GCA 90 bp GTGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATCTGCTGAAGACAGCTaGTTTGCCCAACACCATGCC +
Preference number: 2 (lower is better)
Translates to: VQWCDIRSLQAPPPRFTPSAEDS*FAQHHA
Trigger: GGCATGGTGTTGGGCAAAGCAGCTGTCTTCAGCAGA...TGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR-3UTR CCA 90 bp ACCATGCCCCATTCTAGGAGCAGCCCACAACCAGTGGCCATCCAACATGCAGGTTCTCCTCACTCCTATTaGAAAGCAGCTCTGAAGCAC +
Preference number: 2 (lower is better)
Translates to: TMPHSRSSPQPVAIQHAGSPHSY*KAALKH
Trigger: GTGCTTCAGAGCTGCTTTCCAATAGGAGTGAGGAGA...ACCTGCATGTTGGATGGCCACTGGTTGTGGGCTGCTCCTAGAATGGGGCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR-3UTR TCA 90 bp TGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCCTTCATTTGCCTTTaGTTACAAGAGCACTCTGTA +
Preference number: 2 (lower is better)
Translates to: CSGAISGHCKLRLPGSRHSFICL*LQEHSV
Trigger: TACAGAGTGCTCTTGTAATCAAAGGCAAATGAAGGA...ATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR-3UTR GCA 90 bp GTGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCACACTCTGTAATAAAATaGCATCTAGTCAATTTCCAG +
Preference number: 2 (lower is better)
Translates to: VQWCDIRSLQAPPPRFTPHSVIK*HLVNFQ
Trigger: CTGGAAATTGACTAGATGGCATTTTATTACAGAGTG...TGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR-3UTR CCA 90 bp TGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTATCTCAGTCATCTTTaGAAGTTTCTGGGATGTTGT +
Preference number: 2 (lower is better)
Translates to: CSGAISGHCKLRLPGSRHYLSHL*KFLGCC
Trigger: ACAACATCCCAGAAACTTCCAAAGATGACTGAGATA...ATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR-3UTR GCA 90 bp CTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAGTTGCAATCTCAGCTCACTaGAACTGCTGCCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: LLGWQRIRRHALMVRLSVAISAH*NCCLPG
Trigger: ACCCGGGAGGCAGCAGTTGCAGTGAGCTGAGATTGC...AACTGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
3UTR-3UTR GCA 90 bp GATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGTTCCTTGGTTCCTTCTaGCAGTCTTGGTGCCACCTA +
Preference number: 2 (lower is better)
Translates to: DPRKDQRVEAILMHHPNRFLGSF*QSWCHL
Trigger: TAGGTGGCACCAAGACTGGCAGAAGGAACCAAGGAA...CCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR TCA 90 bp CTGGATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATGCCTGCCTTCTTGTCTaGGTAAGAAAGCAACATCTC +
Preference number: 2 (lower is better)
Translates to: LDPRKDQRVEAILMHHPNACLLV*VRKQHL
Trigger: GAGATGTTGCTTTCTTACTCAGACAAGAAGGCAGGC...ATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513814.5
3UTR-3UTR GCA 90 bp TTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTAGCTCACTGCAACTGCTaGCTCCCGGGTTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: FYLLGWQRIRRHALMVRLAHCNC*LPGSSD
Trigger: ATCGCTTGAACCCGGGAGGCAGCAGTTGCAGTGAGC...TAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
3UTR-3UTR TCA 90 bp CTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAGTTAATCTCTTGACCTTGTaGTCTGCTTTCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: LLGWQRIRRHALMVRLSVNLLTL*SAFLSL
Trigger: GAGGCTGAGGAAAGCAGATCACAAGGTCAAGAGATT...AACTGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
3UTR-3UTR TCA 90 bp TTTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTTCCTGCCTCAGCCTCTaGGTAGCTGAGACTATAGGT +
Preference number: 2 (lower is better)
Translates to: FLSVRLAKDKKTCIDGEISCLSL*VAETIG
Trigger: ACCTATAGTCTCAGCTACTCAGAGGCTGAGGCAGGA...AATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380009.9
3UTR-3UTR GCA 90 bp CTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAGTTCTTGACCTTGTGATCTaGTTTCCTCAGCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: LLGWQRIRRHALMVRLSVLDLVI*FPQPPK
Trigger: TTTGGGAGGCTGAGGAAAGCAGATCACAAGGTCAAG...AACTGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
3UTR-3UTR GCA 90 bp CTGGATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGAATCCAGGGTGGATaGAGGTTTTTGACTTTATGT +
Preference number: 2 (lower is better)
Translates to: LDPRKDQRVEAILMHHPNRIQGG*RFLTLC
Trigger: ACATAAAGTCAAAAACCTGCATCCACCCTGGATTCT...ATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR GCA 90 bp CATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTGCTTTGTCTGTATTCTaGCAATCCCTTTCCATCACT +
Preference number: 2 (lower is better)
Translates to: HSHYIHGIHSESRVDAGFALSVF*QSLSIT
Trigger: AGTGATGGAAAGGGATTGGCAGAATACAGACAAAGC...AAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513814.5
3UTR-3UTR CCA 90 bp TGGTCCCATCATCAAAAGCGGAACATGTGCACTAGCCTCGTACATGCTCATTTTTTCACATTACATCCATaGAATTCACTCAGAATCCAG +
Preference number: 2 (lower is better)
Translates to: WSHHQKRNMCTSLVHAHFFTLHP*NSLRIQ
Trigger: CTGGATTCTGAGTGAATTCCATGGATGTAATGTGAA...AAAATGAGCATGTACGAGGCTAGTGCACATGTTCCGCTTTTGATGATGGGACCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513814.5
3UTR-3UTR GCA 90 bp CATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTAGAATCCAGGGTGGATaGAGGTTTTTGACTTTATGT +
Preference number: 2 (lower is better)
Translates to: HSHYIHGIHSESRVDAGFRIQGG*RFLTLC
Trigger: ACATAAAGTCAAAAACCTGCATCCACCCTGGATTCT...AAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR CCA 90 bp GATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGTTCACATTACATCCATaGAATTCACTCAGAATCCAG +
Preference number: 2 (lower is better)
Translates to: DPRKDQRVEAILMHHPNRFTLHP*NSLRIQ
Trigger: CTGGATTCTGAGTGAATTCCATGGATGTAATGTGAA...CCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR CCA 90 bp CTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAAGCAGAATCCTTCTGCCAGTCTTaGTGCCACCTAAGATTTGCT +
Preference number: 2 (lower is better)
Translates to: LCFHLINCSLLYWWTEAESFCQS*CHLRFA
Trigger: AGCAAATCTTAGGTGGCACCAAGACTGGCAGAAGGA...TTCTGCTTCTGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR CCA 90 bp ACCATCCGAATAGGCTATATATTTCCAGTGGTTAGTTCGAAGCATGTAGGTGGAATTTTCATACTTCCTTaGTTCCTTCTGCCAGTCTTG +
Preference number: 2 (lower is better)
Translates to: TIRIGYIFPVVSSKHVGGIFILP*FLLPVL
Trigger: CAAGACTGGCAGAAGGAACCAAGGAAGTATGAAAAT...TCCACCTACATGCTTCGAACTAACCACTGGAAATATATAGCCTATTCGGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR TCA 90 bp GTAACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTATGGTCTCAATCTCTTaGCCTTGTGATCTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: VTKSGTSRVYIPLNTPNTMVSIS*PCDLLS
Trigger: GGAAAGCAGATCACAAGGTCAAGAGATTGAGACCAT...AGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
3UTR-3UTR GCA 90 bp GATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGTTCCACTTGATAAACTaGTCTTTATTATACTGGTGG +
Preference number: 2 (lower is better)
Translates to: DPRKDQRVEAILMHHPNRFHLIN*SLLYWW
Trigger: CCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAA...CCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR CCA 90 bp TTTTGTTCAAACTGCTCTTGGATTCATATGGGTTTTAAGCCACTGATCAATTGCTTCGAAGCATGTAGGTaGAGGCATTCACATTACATC +
Preference number: 2 (lower is better)
Translates to: FCSNCSWIHMGFKPLINCFEACR*RHSHYI
Trigger: GATGTAATGTGAATGCCTCCACCTACATGCTTCGAA...GCAATTGATCAGTGGCTTAAAACCCATATGAATCCAAGAGCAGTTTGAACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR CCA 90 bp CTGTCCTATACTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACTTCGAAGCATGTAGGTaGAGGCATTCACATTACATC +
Preference number: 2 (lower is better)
Translates to: LSYTLFPLDKLLFIILVDFEACR*RHSHYI
Trigger: GATGTAATGTGAATGCCTCCACCTACATGCTTCGAA...GTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAGTATAGGACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR CAA 90 bp TTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTaGACTTTATGTTCATTCTTAAATGTTTCTGATGATAACGGCAAC +
Preference number: 2 (lower is better)
Translates to: LHPWNSLRIQGGCRF*TLCSFLNVSDDNGN
Trigger: GTTGCCGTTATCATCAGAAACATTTAAGAATGAACATAAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR TCA 90 bp CTGTCCTATACTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACGAAAGATCAAAGAGTTaGGGCAATATTGATGCACCA +
Preference number: 2 (lower is better)
Translates to: LSYTLFPLDKLLFIILVDERSKS*GNIDAP
Trigger: TGGTGCATCAATATTGCCTCAACTCTTTGATCTTTC...GTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAGTATAGGACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR CCA 90 bp CTGGAAATTTTACAGCAACATTTGTTAATTCATCTGGATCCGAGGAAAGATCAAACTCAGAATCCAGGGTaGATGCAGGTTTTTGACTTT +
Preference number: 2 (lower is better)
Translates to: LEILQQHLLIHLDPRKDQTQNPG*MQVFDF
Trigger: AAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGT...TTGATCTTTCCTCGGATCCAGATGAATTAACAAATGTTGCTGTAAAATTTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR GCA 90 bp TTTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATGCAGAACAATGTGTaGAGTATGTTACCGTTTGTG +
Preference number: 2 (lower is better)
Translates to: FLSVRLAKDKKTCIDGEIMQNNV*SMLPFV
Trigger: CACAAACGGTAACATACTGCACACATTGTTCTGCAT...AATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380009.9
3UTR-3UTR GCA 90 bp AGTTTGAGAACTGTCATTCATAAGATGGCAACAAAATTCAGCTTCTCCTCTGCAGTCAATTTCCAGTACTaGCCATTCTCTAAGTTTAAA +
Preference number: 2 (lower is better)
Translates to: SLRTVIHKMATKFSFSSAVNFQY*PFSKFK
Trigger: TTTAAACTTAGAGAATGGGCAGTACTGGAAATTGAC...TGCAGAGGAGAAGCTGAATTTTGTTGCCATCTTATGAATGACAGTTCTCAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR-3UTR GCA 90 bp TTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCGAGCACCATCAAATaGTCACATACAACTATTTTA +
Preference number: 2 (lower is better)
Translates to: FYLLGWQRIRRHALMVRLSSTIK*SHTTIL
Trigger: TAAAATAGTTGTATGTGAGCATTTGATGGTGCTCGA...TAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380009.9
3UTR-3UTR CAA 90 bp GTGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTCACTCCTATaGGAAAGCAGCTCTGAAGCA +
Preference number: 3 (lower is better)
Translates to: VQWCDIRSLQAPPPRFTPFSSLL*ESSSEA
Trigger: TGCTTCAGAGCTGCTTTCCAATAGGAGTGAGGAGAA...TGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR CCA 72 bp ACACCATGCCCCATTCTAGGAGCAGCCCACAACCAGTaGCCATCCAACATGCAGGTGGAAAGGTCTGTTCTC +
Preference number: 3 (lower is better)
Translates to: TPCPILGAAHNQ*PSNMQVERSVL
Trigger: GAGAACAGACCTTTCCACCTGCATGTTGGATGGCCACTGGTTGTGGGCTGCTCCTAGAATGGGGCATGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR CCA 72 bp GAGCAGCCCACAACCAGTGGCCATCCAACATGCAGGTaGAAAGGTCTGTTCTCCTCACTCCTATTGGAAAGC +
Preference number: 3 (lower is better)
Translates to: EQPTTSGHPTCR*KGLFSSLLLES
Trigger: GCTTTCCAATAGGAGTGAGGAGAACAGACCTTTCCACCTGCATGTTGGATGGCCACTGGTTGTGGGCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR CCA 72 bp AAAATGCGTAAGCAGGTGGTTTCGGTACTTGCTTCTTaGAGGGGGAACTGGATGGCAGGGAAGAGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: KMRKQVVSVLAS*RGNWMAGKRER
Trigger: CCTTTCCCTCTTCCCTGCCATCCAGTTCCCCCTCCAAGAAGCAAGTACCGAAACCACCTGCTTACGCATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380009.9
3UTR-3UTR CAA 90 bp GTGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCCTTCATTTGCCTTaGATTACAAGAGCACTCTGT +
Preference number: 3 (lower is better)
Translates to: VQWCDIRSLQAPPPRFTPFLHLP*ITRALC
Trigger: ACAGAGTGCTCTTGTAATCAAAGGCAAATGAAGGAA...TGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR-3UTR CAA 90 bp TGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTTTAGGAATGAACAATaGCCTCTGCTGAAGACAGCT +
Preference number: 3 (lower is better)
Translates to: CSGAISGHCKLRLPGSRHFRNEQ*PLLKTA
Trigger: AGCTGTCTTCAGCAGAGGCAATTGTTCATTCCTAAA...ATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR TCA 72 bp CATGTTGGCCAGGATGGTCTCAATCTCTTGACCTTGTaGTCTGCTTTCCTCAGCCTCCCAAAGTCCTGGGAT +
Preference number: 3 (lower is better)
Translates to: HVGQDGLNLLTL*SAFLSLPKSWD
Trigger: ATCCCAGGACTTTGGGAGGCTGAGGAAAGCAGATCACAAGGTCAAGAGATTGAGACCATCCTGGCCAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
3UTR-3UTR CAA 90 bp TGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATAAGCACCATACTAGTTaGAGAACTGTCATTCATAAG +
Preference number: 3 (lower is better)
Translates to: CSGAISGHCKLRLPGSRHKHHTS*RTVIHK
Trigger: CTTATGAATGACAGTTCTCAAACTAGTATGGTGCTT...ATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR CCA 72 bp CATGCAGGTGGAAAGGTCTGTTCTCCTCACTCCTATTaGAAAGCAGCTCTGAAGCACCATACTAGTTTGAGA +
Preference number: 3 (lower is better)
Translates to: HAGGKVCSPHSY*KAALKHHTSLR
Trigger: TCTCAAACTAGTATGGTGCTTCAGAGCTGCTTTCCAATAGGAGTGAGGAGAACAGACCTTTCCACCTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR-3UTR CAA 90 bp CTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAGTTTTCGGTACTTGCTTCTaGGAGGGGGAACTGGATGGC +
Preference number: 3 (lower is better)
Translates to: LLGWQRIRRHALMVRLSVFGTCF*EGELDG
Trigger: GCCATCCAGTTCCCCCTCCAAGAAGCAAGTACCGAA...AACTGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380009.9
3UTR TCA 72 bp AAACTGTCGATGTTCCATGGCCAGCTCTCCATGGTCTaGGGAGTATATGACAATAGTTTTCTGAAGAAGATC +
Preference number: 3 (lower is better)
Translates to: KLSMFHGQLSMV*GVYDNSFLKKI
Trigger: GATCTTCTTCAGAAAACTATTGTCATATACTCCTCAGACCATGGAGAGCTGGCCATGGAACATCGACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513814.5
3UTR TCA 72 bp TGGATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTaGTGCACCATCCGAATAGGCTATATATTTCCAGTG +
Preference number: 3 (lower is better)
Translates to: WIRGKIKELRQY*CTIRIGYIFPV
Trigger: CACTGGAAATATATAGCCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR CAA 90 bp AGTTCGAAGCATGTAGGTGGAGGCATTCACATTACATCCATGGAATTCACTCAGGGTGGATGCAGGTTTTaGACTTTATGTTCATTCTTA +
Preference number: 3 (lower is better)
Translates to: SSKHVGGGIHITSMEFTQGGCRF*TLCSFL
Trigger: TAAGAATGAACATAAAGTCAAAAACCTGCATCCACC...CTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACATGCTTCGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR CAA 90 bp ACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTCCCGTGCCCGGCCAAAACTaGGTAATTATTAAAACTGTT +
Preference number: 3 (lower is better)
Translates to: TKSGTSRVYIPLNTPNTPVPGQN*VIIKTV
Trigger: AACAGTTTTAATAATTACCAAGTTTTGGCCGGGCAC...GGGAGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380009.9
3UTR-3UTR CAA 90 bp TGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAAGCAGAAACTAGAGTTGAGGCAATATaGATGCACCATCCGAATAGG +
Preference number: 3 (lower is better)
Translates to: CFHLINCSLLYWWTEAETRVEAI*MHHPNR
Trigger: CCTATTCGGATGGTGCATCAATATTGCCTCAACTCT...AGTTTCTGCTTCTGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR TCA 72 bp GGTGCATTTCTGACAAAGGTGACCACTTTGGGATTTTaGTGGCATCATGAGACACTTTTTCAAGCCAATAAA +
Preference number: 3 (lower is better)
Translates to: GAFLTKVTTLGF*WHHETLFQANK
Trigger: TTTATTGGCTTGAAAAAGTGTCTCATGATGCCATCAAAATCCCAAAGTGGTCACCTTTGTCAGAAATGCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512106.1
ENST00000513814.5
3UTR-3UTR CAA 90 bp AAGAGTAATAATCTACAGGGTGCATTTCTGACAAAGGTGACCACTTTGGGATTTGTGCCCGGCCAAAACTaGGTAATTATTAAAACTGTT +
Preference number: 3 (lower is better)
Translates to: KSNNLQGAFLTKVTTLGFVPGQN*VIIKTV
Trigger: AACAGTTTTAATAATTACCAAGTTTTGGCCGGGCAC...AAATCCCAAAGTGGTCACCTTTGTCAGAAATGCACCCTGTAGATTATTACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513814.5
3UTR-3UTR CAA 90 bp CTGGAAATTTTACAGCAACATTTGTTAATTCATCTGGATCCGAGGAAAGATCAAAGAGTTGAGGCAATATaGATGCACCATCCGAATAGG +
Preference number: 3 (lower is better)
Translates to: LEILQQHLLIHLDPRKDQRVEAI*MHHPNR
Trigger: CCTATTCGGATGGTGCATCAATATTGCCTCAACTCT...TTGATCTTTCCTCGGATCCAGATGAATTAACAAATGTTGCTGTAAAATTTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR-3UTR CAA 90 bp TATAAGAAGAGTAATAATCTACAGGGTGCATTTCTGACAAAGGTGACCACTTTGAACCAGTTTACTGCTTaGTCTGTATTCTGCCAATCC +
Preference number: 3 (lower is better)
Translates to: YKKSNNLQGAFLTKVTTLNQFTA*SVFCQS
Trigger: GGATTGGCAGAATACAGACAAAGCAGTAAACTGGTT...CAAAGTGGTCACCTTTGTCAGAAATGCACCCTGTAGATTATTACTCTTCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512106.1
ENST00000513814.5
3UTR TCA 72 bp ATATCTCAGTCATCTTTGGAAGTTTCTGGGATGTTGTaGTCCACATTCGGATTCCCTTTTAGGAATGAACAA +
Preference number: 3 (lower is better)
Translates to: ISQSSLEVSGML*STFGFPFRNEQ
Trigger: TTGTTCATTCCTAAAAGGGAATCCGAATGTGGATCACAACATCCCAGAAACTTCCAAAGATGACTGAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR-3UTR CAA 90 bp CTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAAGCAGAAGGTGGATGCAGGTTTTaGACTTTATGTTCATTCTTA +
Preference number: 3 (lower is better)
Translates to: LCFHLINCSLLYWWTEAEGGCRF*TLCSFL
Trigger: TAAGAATGAACATAAAGTCAAAAACCTGCATCCACC...TTCTGCTTCTGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp GTGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCACCGCCTCTGCTCCCCTaGTCCGGGGGCCAGTACCGC +
Preference number: 4 (lower is better)
Translates to: VQWCDIRSLQAPPPRFTPPPLLP*SGGQYR
Trigger: GCGGTACTGGCCCCCGGAGCAGGGGAGCAGAGGCGG...TGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR GCA 90 bp ACCATGCCCCATTCTAGGAGCAGCCCACAACCAGTGGCCATCCAACATGCAGGTCGCCAGCGCCAAGGCTaGGACCACCGACACCCACAG +
Preference number: 4 (lower is better)
Translates to: TMPHSRSSPQPVAIQHAGRQRQG*DHRHPQ
Trigger: CTGTGGGTGTCGGTGGTCGCAGCCTTGGCGCTGGCG...ACCTGCATGTTGGATGGCCACTGGTTGTGGGCTGCTCCTAGAATGGGGCATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CCA 90 bp TGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATCCAGCCGCCTCCCTCTaGCGTTCTCTCCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: CSGAISGHCKLRLPGSRHPAASL*RSLPSR
Trigger: TCTGCTAGGGAGAGAACGCCAGAGGGAGGCGGCTGG...ATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CCA 90 bp TGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATCCACATTGGGCGCTTTaGCTGCTCTCCGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CSGAISGHCKLRLPGSRHPHWAL*LLSASA
Trigger: AGCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGG...ATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR GCA 90 bp GCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTGCTGCTCTCCGCCTCTaGTCCCCTGCTCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: AFTLHPWNSLRIQGGCRFAALRL*SPAPGA
Trigger: GGCCCCCGGAGCAGGGGAGCAGAGGCGGAGAGCAGC...AAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp ACCATCCGAATAGGCTATATATTTCCAGTGGTTAGTTCGAAGCATGTAGGTGGAGCGGTTCTGAGAGCCTaGCGCCGGGCCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: TIRIGYIFPVVSSKHVGGAVLRA*RRASRL
Trigger: GAGGCGGCTGGCCCGGCGGCAGGCTCTCAGAACCGC...TCCACCTACATGCTTCGAACTAACCACTGGAAATATATAGCCTATTCGGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp ACCATGCCCCATTCTAGGAGCAGCCCACAACCAGTGGCCATCCAACATGCAGGTTCTGCTGAAGACAGCTaGTTTGCCCAACACCATGCC +
Preference number: 4 (lower is better)
Translates to: TMPHSRSSPQPVAIQHAGSAEDS*FAQHHA
Trigger: GGCATGGTGTTGGGCAAAGCAGCTGTCTTCAGCAGA...ACCTGCATGTTGGATGGCCACTGGTTGTGGGCTGCTCCTAGAATGGGGCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR GCA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTAATTGGGCGCTTTGGCTaGTCTCCGCCTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GREEGKDRDFTITVNPFVIGRFG*SPPLLP
Trigger: GGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAAT...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp CTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAGTTCCGCCTCTGCTCCCCTaGTCCGGGGGCCAGTACCGC +
Preference number: 4 (lower is better)
Translates to: LLGWQRIRRHALMVRLSVPPLLP*SGGQYR
Trigger: GCGGTACTGGCCCCCGGAGCAGGGGAGCAGAGGCGG...AACTGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp AAGAGTAATAATCTACAGGGTGCATTTCTGACAAAGGTGACCACTTTGGGATTTCCGCCTCTGCTCCCCTaGTCCGGGGGCCAGTACCGC +
Preference number: 4 (lower is better)
Translates to: KSNNLQGAFLTKVTTLGFPPLLP*SGGQYR
Trigger: GCGGTACTGGCCCCCGGAGCAGGGGAGCAGAGGCGG...AAATCCCAAAGTGGTCACCTTTGTCAGAAATGCACCCTGTAGATTATTACTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR GCA 90 bp CATGTAGGTGGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGATTGGGCGCTTTGGCTaGTCTCCGCCTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: HVGGGIHITSMEFTQNPGIGRFG*SPPLLP
Trigger: GGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAAT...CCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR CAA 72 bp AGGAATGAACAATTGCCTCTGCTGAAGACAGCTGCTTaGCCCAACACCATGCCCCATTCTAGGAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RNEQLPLLKTAA*PNTMPHSRSSP
Trigger: TGGGCTGCTCCTAGAATGGGGCATGGTGTTGGGCAAAGCAGCTGTCTTCAGCAGAGGCAATTGTTCATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR GCA 90 bp TGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTTGACTTTATGTTCATTCCGCCAGCGCCAAGGCTaGGACCACCGACACCCACAG +
Preference number: 4 (lower is better)
Translates to: WNSLRIQGGCRFLTLCSFRQRQG*DHRHPQ
Trigger: CTGTGGGTGTCGGTGGTCGCAGCCTTGGCGCTGGCG...GAATGAACATAAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp TTTTGTTCAAACTGCTCTTGGATTCATATGGGTTTTAAGCCACTGATCAATTGCCCGCCTCTGCTCCCCTaGTCCGGGGGCCAGTACCGC +
Preference number: 4 (lower is better)
Translates to: FCSNCSWIHMGFKPLINCPPLLP*SGGQYR
Trigger: GCGGTACTGGCCCCCGGAGCAGGGGAGCAGAGGCGG...GCAATTGATCAGTGGCTTAAAACCCATATGAATCCAAGAGCAGTTTGAACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp TATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAGCTGCTCTCCGCCTCTaGTCCCCTGCTCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: YLLGWQRIRRHALMVRLSAALRL*SPAPGA
Trigger: GGCCCCCGGAGCAGGGGAGCAGAGGCGGAGAGCAGC...TGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp TGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAAGCAGAAACTGCTGCTCTCCGCCTCTaGTCCCCTGCTCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: CFHLINCSLLYWWTEAETAALRL*SPAPGA
Trigger: GGCCCCCGGAGCAGGGGAGCAGAGGCGGAGAGCAGC...AGTTTCTGCTTCTGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp ACCATGCCCCATTCTAGGAGCAGCCCACAACCAGTGGCCATCCAACATGCAGGTTCCTCTGCACAATCCTaGTTCCTTCATTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: TMPHSRSSPQPVAIQHAGSSAQS*FLHLPL
Trigger: CAAAGGCAAATGAAGGAAGCAGGATTGTGCAGAGGA...ACCTGCATGTTGGATGGCCACTGGTTGTGGGCTGCTCCTAGAATGGGGCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CCA 90 bp AGTTCGAAGCATGTAGGTGGAGGCATTCACATTACATCCATGGAATTCACTCAGCCAGCCGCCTCCCTCTaGCGTTCTCTCCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSKHVGGGIHITSMEFTQPAASL*RSLPSR
Trigger: TCTGCTAGGGAGAGAACGCCAGAGGGAGGCGGCTGG...CTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACATGCTTCGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp TTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTAGCGGTTCTGAGAGCCTaGCGCCGGGCCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: FYLLGWQRIRRHALMVRLAVLRA*RRASRL
Trigger: GAGGCGGCTGGCCCGGCGGCAGGCTCTCAGAACCGC...TAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp AAATGCCATCTAGTCAATTTCCAGTACTGCCCATTCTCTAAGTTTAAATCACAAGCGGTTCTGAGAGCCTaGCGCCGGGCCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: KCHLVNFQYCPFSKFKSQAVLRA*RRASRL
Trigger: GAGGCGGCTGGCCCGGCGGCAGGCTCTCAGAACCGC...TTGTGATTTAAACTTAGAGAATGGGCAGTACTGGAAATTGACTAGATGGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR GCA 90 bp AAATGCCATCTAGTCAATTTCCAGTACTGCCCATTCTCTAAGTTTAAATCACAAGCTGCTCTCCGCCTCTaGTCCCCTGCTCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: KCHLVNFQYCPFSKFKSQAALRL*SPAPGA
Trigger: GGCCCCCGGAGCAGGGGAGCAGAGGCGGAGAGCAGC...TTGTGATTTAAACTTAGAGAATGGGCAGTACTGGAAATTGACTAGATGGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CCA 90 bp GCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTCCACATTGGGCGCTTTaGCTGCTCTCCGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AFTLHPWNSLRIQGGCRFPHWAL*LLSASA
Trigger: AGCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGG...AAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTATCTTGGAGGGGGAACTaGATGGCAGGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GREEGKDRDFTITVNPFVSWRGN*MAGKRE
Trigger: TTCCCTCTTCCCTGCCATCCAGTTCCCCCTCCAAGA...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp GTGGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCCCACATTGCTGCGCGTaGTGGGCAACAAATTGGAGA +
Preference number: 4 (lower is better)
Translates to: VEAFTLHPWNSLRIQGGCPHCCA*WATNWR
Trigger: TCTCCAATTTGTTGCCCATCACGCGCAGCAATGTGG...GCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTATCCTGCCTCAGCCTCTaGGTAGCTGAGACTATAGGT +
Preference number: 4 (lower is better)
Translates to: GREEGKDRDFTITVNPFVSCLSL*VAETIG
Trigger: ACCTATAGTCTCAGCTACTCAGAGGCTGAGGCAGGA...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp GTAACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTCGCCAGCGCCAAGGCTaGGACCACCGACACCCACAG +
Preference number: 4 (lower is better)
Translates to: VTKSGTSRVYIPLNTPNTRQRQG*DHRHPQ
Trigger: CTGTGGGTGTCGGTGGTCGCAGCCTTGGCGCTGGCG...AGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp CTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAAGCAGAACGCCAGCGCCAAGGCTaGGACCACCGACACCCACAG +
Preference number: 4 (lower is better)
Translates to: LCFHLINCSLLYWWTEAERQRQG*DHRHPQ
Trigger: CTGTGGGTGTCGGTGGTCGCAGCCTTGGCGCTGGCG...TTCTGCTTCTGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp GTGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCAGTCAATTTCCAGTACTaGCCATTCTCTAAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: VQWCDIRSLQAPPPRFTPVNFQY*PFSKFK
Trigger: TTTAAACTTAGAGAATGGGCAGTACTGGAAATTGAC...TGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CCA 90 bp ACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTCCCCCAGCCGCCTCCCTCTaGCGTTCTCTCCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: TKSGTSRVYIPLNTPNTPPAASL*RSLPSR
Trigger: TCTGCTAGGGAGAGAACGCCAGAGGGAGGCGGCTGG...GGGAGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTATATCCACTCAGGTTCTaGGGCAGAGGAATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GREEGKDRDFTITVNPFVYPLRF*GRGIPA
Trigger: TGCTGGAATTCCTCTGCCTCAGAACCTGAGTGGATA...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp AGTTTGAGAACTGTCATTCATAAGATGGCAACAAAATTCAGCTTCTCCTCTGCAATTGGGCGCTTTGGCTaGTCTCCGCCTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SLRTVIHKMATKFSFSSAIGRFG*SPPLLP
Trigger: GGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAAT...TGCAGAGGAGAAGCTGAATTTTGTTGCCATCTTATGAATGACAGTTCTCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR GCA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTATTCCTTGGTTCCTTCTaGCAGTCTTGGTGCCACCTA +
Preference number: 4 (lower is better)
Translates to: GREEGKDRDFTITVNPFVFLGSF*QSWCHL
Trigger: TAGGTGGCACCAAGACTGGCAGAAGGAACCAAGGAA...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTACAAGATTCTGTTAAGTaGGTGAAGAGGCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: GREEGKDRDFTITVNPFVQDSVK*VKRPLH
Trigger: GTGGAGTGGCCTCTTCACTCACTTAACAGAATCTTG...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTAAGCCATGCCTCTCCATaGCATCCATCCATGTTGTAT +
Preference number: 4 (lower is better)
Translates to: GREEGKDRDFTITVNPFVSHASP*HPSMLY
Trigger: ATACAACATGGATGGATGTCATGGAGAGGCATGGCT...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp GGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGAGCCATGCCTCTCCATaGCATCCATCCATGTTGTAT +
Preference number: 4 (lower is better)
Translates to: GGIHITSMEFTQNPGWMQSHASP*HPSMLY
Trigger: ATACAACATGGATGGATGTCATGGAGAGGCATGGCT...CTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp CTGTCCTATACTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACATTGGGCGCTTTGGCTaGTCTCCGCCTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSYTLFPLDKLLFIILVDIGRFG*SPPLLP
Trigger: GGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAAT...GTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAGTATAGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp TGCTCATTTTATAAAACTGTCGATGTTCCATGGCCAGCTCTCCATGGTCTGAGGTTCCTTGGTTCCTTCTaGCAGTCTTGGTGCCACCTA +
Preference number: 4 (lower is better)
Translates to: CSFYKTVDVPWPALHGLRFLGSF*QSWCHL
Trigger: TAGGTGGCACCAAGACTGGCAGAAGGAACCAAGGAA...CCTCAGACCATGGAGAGCTGGCCATGGAACATCGACAGTTTTATAAAATGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR CCA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTAATGGCCAGCTCTCCATaGTCTGAGGAGTATATGACA +
Preference number: 4 (lower is better)
Translates to: GREEGKDRDFTITVNPFVMASSP*SEEYMT
Trigger: TGTCATATACTCCTCAGACCATGGAGAGCTGGCCAT...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CCA 90 bp GGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGATGGCCAGCTCTCCATaGTCTGAGGAGTATATGACA +
Preference number: 4 (lower is better)
Translates to: GGIHITSMEFTQNPGWMQMASSP*SEEYMT
Trigger: TGTCATATACTCCTCAGACCATGGAGAGCTGGCCAT...CTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp GCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTACTGTCGATGTTCCATaGCCAGCTCTCCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: AFTLHPWNSLRIQGGCRFTVDVP*PALHGL
Trigger: CAGACCATGGAGAGCTGGCCATGGAACATCGACAGT...AAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp AGTTTGAGAACTGTCATTCATAAGATGGCAACAAAATTCAGCTTCTCCTCTGCAAGCCTCCCGAGTAGCTaGGACTACAGGCGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: SLRTVIHKMATKFSFSSASLPSS*DYRRPK
Trigger: TTTCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCT...TGCAGAGGAGAAGCTGAATTTTGTTGCCATCTTATGAATGACAGTTCTCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR TCA 90 bp GATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGTATCCACTCAGGTTCTaGGGCAGAGGAATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DPRKDQRVEAILMHHPNRYPLRF*GRGIPA
Trigger: TGCTGGAATTCCTCTGCCTCAGAACCTGAGTGGATA...CCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp GCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTATCCACTCAGGTTCTaGGGCAGAGGAATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AFTLHPWNSLRIQGGCRFYPLRF*GRGIPA
Trigger: TGCTGGAATTCCTCTGCCTCAGAACCTGAGTGGATA...AAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTAATGGTCTCAATCTCTTaGCCTTGTGATCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GREEGKDRDFTITVNPFVMVSIS*PCDLLS
Trigger: GGAAAGCAGATCACAAGGTCAAGAGATTGAGACCAT...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp CATGTAGGTGGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGCAAAAGCGGAACATGTaGACTAGCCTCGTACATGCT +
Preference number: 4 (lower is better)
Translates to: HVGGGIHITSMEFTQNPGQKRNM*TSLVHA
Trigger: AGCATGTACGAGGCTAGTGCACATGTTCCGCTTTTG...CCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp TATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCACCACATTGGGCGCTTTaGCTGCTCTCCGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: YLLGWQRIRRHALMVRLSPHWAL*LLSASA
Trigger: AGCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGG...TGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CCA 90 bp TCACTCAGAATCCAGGGTGGATGCAGGTTTTTGACTTTATGTTCATTCTTAAATCCACATTGGGCGCTTTaGCTGCTCTCCGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLRIQGGCRFLTLCSFLNPHWAL*LLSASA
Trigger: AGCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGG...ATTTAAGAATGAACATAAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp CATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTACTGTCGATGTTCCATaGCCAGCTCTCCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: HSHYIHGIHSESRVDAGFTVDVP*PALHGL
Trigger: CAGACCATGGAGAGCTGGCCATGGAACATCGACAGT...AAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp GCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTGCCGGCTTTAATTCCTaGTCCCATCATCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: AFTLHPWNSLRIQGGCRFAGFNS*SHHQKR
Trigger: CCGCTTTTGATGATGGGACCAGGAATTAAAGCCGGC...AAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp CATGTAGGTGGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTCCTTCTGCCAGTCTTaGTGCCACCTAAGATTTGCT +
Preference number: 4 (lower is better)
Translates to: HVGGGIHITSMEFTQNPGSFCQS*CHLRFA
Trigger: AGCAAATCTTAGGTGGCACCAAGACTGGCAGAAGGA...CCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp CTGGATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATCAAGATTCTGTTAAGTaGGTGAAGAGGCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: LDPRKDQRVEAILMHHPNQDSVK*VKRPLH
Trigger: GTGGAGTGGCCTCTTCACTCACTTAACAGAATCTTG...ATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp GATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGGAGTTGAGGCAATATTaGTGCACCATCCGAATAGGC +
Preference number: 4 (lower is better)
Translates to: DPRKDQRVEAILMHHPNRELRQY*CTIRIG
Trigger: GCCTATTCGGATGGTGCATCAATATTGCCTCAACTC...CCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp CTGGATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATGAGTTGAGGCAATATTaGTGCACCATCCGAATAGGC +
Preference number: 4 (lower is better)
Translates to: LDPRKDQRVEAILMHHPNELRQY*CTIRIG
Trigger: GCCTATTCGGATGGTGCATCAATATTGCCTCAACTC...ATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp GCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTAGCTTGCAGTTTGGTTaGTTGATAGTAACGCCGAGC +
Preference number: 4 (lower is better)
Translates to: AFTLHPWNSLRIQGGCRFSLQFG*LIVTPS
Trigger: GCTCGGCGTTACTATCAAGCAACCAAACTGCAAGCT...AAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR GCA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTAGCTTTGTCTGTATTCTaGCAATCCCTTTCCATCACT +
Preference number: 4 (lower is better)
Translates to: GREEGKDRDFTITVNPFVALSVF*QSLSIT
Trigger: AGTGATGGAAAGGGATTGGCAGAATACAGACAAAGC...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp GATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGCAAAAGCGGAACATGTaGACTAGCCTCGTACATGCT +
Preference number: 4 (lower is better)
Translates to: DPRKDQRVEAILMHHPNRQKRNM*TSLVHA
Trigger: AGCATGTACGAGGCTAGTGCACATGTTCCGCTTTTG...CCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp GTAACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTGCTCACTGCAACTGCTaGCTCCCGGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: VTKSGTSRVYIPLNTPNTAHCNC*LPGSSD
Trigger: ATCGCTTGAACCCGGGAGGCAGCAGTTGCAGTGAGC...AGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp AGTTTGAGAACTGTCATTCATAAGATGGCAACAAAATTCAGCTTCTCCTCTGCATTCACGCCATTCTCCTaGTTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLRTVIHKMATKFSFSSAFTPFS*FSLPSS
Trigger: GCTACTCGGGAGGCTGAAGCAGGAGAATGGCGTGAA...TGCAGAGGAGAAGCTGAATTTTGTTGCCATCTTATGAATGACAGTTCTCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CCA 90 bp AGTTCGAAGCATGTAGGTGGAGGCATTCACATTACATCCATGGAATTCACTCAGTCCTTCTGCCAGTCTTaGTGCCACCTAAGATTTGCT +
Preference number: 4 (lower is better)
Translates to: SSKHVGGGIHITSMEFTQSFCQS*CHLRFA
Trigger: AGCAAATCTTAGGTGGCACCAAGACTGGCAGAAGGA...CTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACATGCTTCGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp CATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTCAAGATTCTGTTAAGTaGGTGAAGAGGCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: HSHYIHGIHSESRVDAGFQDSVK*VKRPLH
Trigger: GTGGAGTGGCCTCTTCACTCACTTAACAGAATCTTG...AAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp CATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTGCCTGCCTTCTTGTCTaGGTAAGAAAGCAACATCTC +
Preference number: 4 (lower is better)
Translates to: HSHYIHGIHSESRVDAGFACLLV*VRKQHL
Trigger: GAGATGTTGCTTTCTTACTCAGACAAGAAGGCAGGC...AAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp TCTACAGGGTGCATTTCTGACAAAGGTGACCACTTTGGGATTTTGATGGCATCACAGCTCTCCATGGTCTaGGGAGTATATGACAATAGT +
Preference number: 4 (lower is better)
Translates to: STGCISDKGDHFGILMASQLSMV*GVYDNS
Trigger: ACTATTGTCATATACTCCTCAGACCATGGAGAGCTG...TGATGCCATCAAAATCCCAAAGTGGTCACCTTTGTCAGAAATGCACCCTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR TCA 90 bp GGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGAAAGATCAAAGAGTTaGGGCAATATTGATGCACCA +
Preference number: 4 (lower is better)
Translates to: GGIHITSMEFTQNPGWMQERSKS*GNIDAP
Trigger: TGGTGCATCAATATTGCCTCAACTCTTTGATCTTTC...CTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp GCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTACTTCTTTGATTAGTTaGCCCACGTTCACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: AFTLHPWNSLRIQGGCRFTSLIS*PTFTVP
Trigger: AGGCACAGTGAACGTGGGTCAACTAATCAAAGAAGT...AAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR GCA 90 bp TTTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTGCAATCTCAGCTCACTaGAACTGCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: FLSVRLAKDKKTCIDGEIAISAH*NCCLPG
Trigger: ACCCGGGAGGCAGCAGTTGCAGTGAGCTGAGATTGC...AATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CCA 90 bp ACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTTGACTATGGCCAGCTCTCCATaGTCTGAGGAGTATATGACA +
Preference number: 4 (lower is better)
Translates to: TLHPWNSLRIQGGCRFLTMASSP*SEEYMT
Trigger: TGTCATATACTCCTCAGACCATGGAGAGCTGGCCAT...AGTCAAAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp ACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTCCCGCCGGCTTTAATTCCTaGTCCCATCATCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: TKSGTSRVYIPLNTPNTPAGFNS*SHHQKR
Trigger: CCGCTTTTGATGATGGGACCAGGAATTAAAGCCGGC...GGGAGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CCA 90 bp CATGTAGGTGGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTTCGAAGCATGTAGGTaGAGGCATTCACATTACATC +
Preference number: 4 (lower is better)
Translates to: HVGGGIHITSMEFTQNPGFEACR*RHSHYI
Trigger: GATGTAATGTGAATGCCTCCACCTACATGCTTCGAA...CCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp ACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTTGACTATTCTGTTAAGTGAGTaGAGAGGCCACTCCACATTG +
Preference number: 4 (lower is better)
Translates to: TLHPWNSLRIQGGCRFLTILLSE*RGHSTL
Trigger: CAATGTGGAGTGGCCTCTTCACTCACTTAACAGAAT...AGTCAAAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp TCTACAGGGTGCATTTCTGACAAAGGTGACCACTTTGGGATTTTGATGGCATCAACCACTTTGGGATTTTaGTGGCATCATGAGACACTT +
Preference number: 4 (lower is better)
Translates to: STGCISDKGDHFGILMASTTLGF*WHHETL
Trigger: AAGTGTCTCATGATGCCATCAAAATCCCAAAGTGGT...TGATGCCATCAAAATCCCAAAGTGGTCACCTTTGTCAGAAATGCACCCTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512106.1
ENST00000513814.5
CDS-3UTR TCA 90 bp TTTCTCCAGAAGATGGTGAAGGGTAAGGGTGTGGTAAATTTAATCCCAAGTAAACACGATTACTGCGCGTaGTGGGCAACAAATTGGAGA +
Preference number: 4 (lower is better)
Translates to: FLQKMVKGKGVVNLIPSKHDYCA*WATNWR
Trigger: TCTCCAATTTGTTGCCCATCACGCGCAGTAATCGTG...TTTACTTGGGATTAAATTTACCACACCCTTACCCTTCACCATCTTCTGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512106.1
CDS-3UTR GCA 90 bp GATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGGCTTTGTCTGTATTCTaGCAATCCCTTTCCATCACT +
Preference number: 4 (lower is better)
Translates to: DPRKDQRVEAILMHHPNRALSVF*QSLSIT
Trigger: AGTGATGGAAAGGGATTGGCAGAATACAGACAAAGC...CCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp TATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAACTGTCGATGTTCCATaGCCAGCTCTCCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: YLLGWQRIRRHALMVRLSTVDVP*PALHGL
Trigger: CAGACCATGGAGAGCTGGCCATGGAACATCGACAGT...TGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CCA 90 bp GGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGTTCACATTACATCCATaGAATTCACTCAGAATCCAG +
Preference number: 4 (lower is better)
Translates to: GGIHITSMEFTQNPGWMQFTLHP*NSLRIQ
Trigger: CTGGATTCTGAGTGAATTCCATGGATGTAATGTGAA...CTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp GTGGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCTGCTCTTTATTATACTaGTGGACAGAAGCAGAAACT +
Preference number: 4 (lower is better)
Translates to: VEAFTLHPWNSLRIQGGCCSLLY*WTEAET
Trigger: AGTTTCTGCTTCTGTCCACCAGTATAATAAAGAGCA...GCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp AAATGCCATCTAGTCAATTTCCAGTACTGCCCATTCTCTAAGTTTAAATCACAACAGGCTGGAGTGCAGTaGTGCGATATCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: KCHLVNFQYCPFSKFKSQQAGVQ*CDIRSL
Trigger: CAGTGACCTGATATCGCACCACTGCACTCCAGCCTG...TTGTGATTTAAACTTAGAGAATGGGCAGTACTGGAAATTGACTAGATGGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR TCA 90 bp TTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTACCACATTGCTGCGCGTaGTGGGCAACAAATTGGAGA +
Preference number: 4 (lower is better)
Translates to: FYLLGWQRIRRHALMVRLPHCCA*WATNWR
Trigger: TCTCCAATTTGTTGCCCATCACGCGCAGCAATGTGG...TAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp CAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGCTATATATTTCCAGTAGCCATGCCTCTCCATaGCATCCATCCATGTTGTAT +
Preference number: 4 (lower is better)
Translates to: QRVEAILMHHPNRLYISSSHASP*HPSMLY
Trigger: ATACAACATGGATGGATGTCATGGAGAGGCATGGCT...ACTGGAAATATATAGCCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp CTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAGTTGCCTGCCTTCTTGTCTaGGTAAGAAAGCAACATCTC +
Preference number: 4 (lower is better)
Translates to: LLGWQRIRRHALMVRLSVACLLV*VRKQHL
Trigger: GAGATGTTGCTTTCTTACTCAGACAAGAAGGCAGGC...AACTGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp TTTCTCCAGAAGATGGTGAAGGGTAAGGGTGTGGTAAATTTAATCCCAAGTAAAGCCTGCCTTCTTGTCTaGGTAAGAAAGCAACATCTC +
Preference number: 4 (lower is better)
Translates to: FLQKMVKGKGVVNLIPSKACLLV*VRKQHL
Trigger: GAGATGTTGCTTTCTTACTCAGACAAGAAGGCAGGC...TTTACTTGGGATTAAATTTACCACACCCTTACCCTTCACCATCTTCTGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512106.1
ENST00000513814.5
CDS-3UTR TCA 90 bp ACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTCCCCAGCTCTCCATGGTCTaGGGAGTATATGACAATAGT +
Preference number: 4 (lower is better)
Translates to: TKSGTSRVYIPLNTPNTPQLSMV*GVYDNS
Trigger: ACTATTGTCATATACTCCTCAGACCATGGAGAGCTG...GGGAGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp GCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTAGAATCCAGGGTGGATaGAGGTTTTTGACTTTATGT +
Preference number: 4 (lower is better)
Translates to: AFTLHPWNSLRIQGGCRFRIQGG*RFLTLC
Trigger: ACATAAAGTCAAAAACCTGCATCCACCCTGGATTCT...AAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp TGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAAGCAGAAACTTTCCTTGGTTCCTTCTaGCAGTCTTGGTGCCACCTA +
Preference number: 4 (lower is better)
Translates to: CFHLINCSLLYWWTEAETFLGSF*QSWCHL
Trigger: TAGGTGGCACCAAGACTGGCAGAAGGAACCAAGGAA...AGTTTCTGCTTCTGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTAAAGGATAAGAAGACATaGATTGATGGTGAGATTATC +
Preference number: 4 (lower is better)
Translates to: GREEGKDRDFTITVNPFVKDKKT*IDGEII
Trigger: GATAATCTCACCATCAATGCATGTCTTCTTATCCTT...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp AAATGCCATCTAGTCAATTTCCAGTACTGCCCATTCTCTAAGTTTAAATCACAAGCTGGAGTGCAGTGGTaGGATATCAGGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: KCHLVNFQYCPFSKFKSQAGVQW*DIRSLQ
Trigger: TTGCAGTGACCTGATATCGCACCACTGCACTCCAGC...TTGTGATTTAAACTTAGAGAATGGGCAGTACTGGAAATTGACTAGATGGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CCA 90 bp ACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTCCCCCAAAGCTTGCAGTTTaGTTGCTTGATAGTAACGCC +
Preference number: 4 (lower is better)
Translates to: TKSGTSRVYIPLNTPNTPPKLAV*LLDSNA
Trigger: GGCGTTACTATCAAGCAACCAAACTGCAAGCTTTGG...GGGAGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CCA 90 bp CTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAAGCAGAAGCCGGCTTTAATTCCTaGTCCCATCATCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: LCFHLINCSLLYWWTEAEAGFNS*SHHQKR
Trigger: CCGCTTTTGATGATGGGACCAGGAATTAAAGCCGGC...TTCTGCTTCTGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp CATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTTTCGAAGCATGTAGGTaGAGGCATTCACATTACATC +
Preference number: 4 (lower is better)
Translates to: HSHYIHGIHSESRVDAGFFEACR*RHSHYI
Trigger: GATGTAATGTGAATGCCTCCACCTACATGCTTCGAA...AAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp TGCTCATTTTATAAAACTGTCGATGTTCCATGGCCAGCTCTCCATGGTCTGAGGTGCTCTTTATTATACTaGTGGACAGAAGCAGAAACT +
Preference number: 4 (lower is better)
Translates to: CSFYKTVDVPWPALHGLRCSLLY*WTEAET
Trigger: AGTTTCTGCTTCTGTCCACCAGTATAATAAAGAGCA...CCTCAGACCATGGAGAGCTGGCCATGGAACATCGACAGTTTTATAAAATGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR CCA 90 bp AGTTTGAGAACTGTCATTCATAAGATGGCAACAAAATTCAGCTTCTCCTCTGCATCTCCTCACTCCTATTaGAAAGCAGCTCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SLRTVIHKMATKFSFSSASPHSY*KAALKH
Trigger: GTGCTTCAGAGCTGCTTTCCAATAGGAGTGAGGAGA...TGCAGAGGAGAAGCTGAATTTTGTTGCCATCTTATGAATGACAGTTCTCAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR CAA 72 bp CTGGATCCGAGGAAAGATCAAAGAGTTGAGGCAATATaGATGCACCATCCGAATAGGCTATATATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LDPRKDQRVEAI*MHHPNRLYISS
Trigger: ACTGGAAATATATAGCCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp CTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAGTTATTCTGTTAAGTGAGTaGAGAGGCCACTCCACATTG +
Preference number: 4 (lower is better)
Translates to: LLGWQRIRRHALMVRLSVILLSE*RGHSTL
Trigger: CAATGTGGAGTGGCCTCTTCACTCACTTAACAGAAT...AACTGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp AGTTCGAAGCATGTAGGTGGAGGCATTCACATTACATCCATGGAATTCACTCAGATTTTGATGGCATCATaGGACACTTTTTCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SSKHVGGGIHITSMEFTQILMAS*DTFSSQ
Trigger: TTGGCTTGAAAAAGTGTCTCATGATGCCATCAAAAT...CTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACATGCTTCGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp TACTGCTTTGTCTGTATTCTGCCAATCCCTTTCCATCACTCTGACTTTAGTCCTGAAAGATCAAAGAGTTaGGGCAATATTGATGCACCA +
Preference number: 4 (lower is better)
Translates to: YCFVCILPIPFHHSDFSPERSKS*GNIDAP
Trigger: TGGTGCATCAATATTGCCTCAACTCTTTGATCTTTC...AGGACTAAAGTCAGAGTGATGGAAAGGGATTGGCAGAATACAGACAAAGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR TCA 90 bp GTAACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTAATCTCTTGACCTTGTaGTCTGCTTTCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VTKSGTSRVYIPLNTPNTNLLTL*SAFLSL
Trigger: GAGGCTGAGGAAAGCAGATCACAAGGTCAAGAGATT...AGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp TATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAAGCTTGCAGTTTGGTTaGTTGATAGTAACGCCGAGC +
Preference number: 4 (lower is better)
Translates to: YLLGWQRIRRHALMVRLSSLQFG*LIVTPS
Trigger: GCTCGGCGTTACTATCAAGCAACCAAACTGCAAGCT...TGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp CATGTAGGTGGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGACTTTTTGTTCAAACTaGTCTTGGATTCATATGGGT +
Preference number: 4 (lower is better)
Translates to: HVGGGIHITSMEFTQNPGTFCSN*SWIHMG
Trigger: ACCCATATGAATCCAAGAGCAGTTTGAACAAAAAGT...CCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR GCA 90 bp AGTTTGAGAACTGTCATTCATAAGATGGCAACAAAATTCAGCTTCTCCTCTGCAATTCAGCTTCTCCTCTaGACAATCCTGCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SLRTVIHKMATKFSFSSAIQLLL*TILLPS
Trigger: TGAAGGAAGCAGGATTGTGCAGAGGAGAAGCTGAAT...TGCAGAGGAGAAGCTGAATTTTGTTGCCATCTTATGAATGACAGTTCTCAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CCA 90 bp TTTCTCCAGAAGATGGTGAAGGGTAAGGGTGTGGTAAATTTAATCCCAAGTAAACCAAAGCTTGCAGTTTaGTTGCTTGATAGTAACGCC +
Preference number: 4 (lower is better)
Translates to: FLQKMVKGKGVVNLIPSKPKLAV*LLDSNA
Trigger: GGCGTTACTATCAAGCAACCAAACTGCAAGCTTTGG...TTTACTTGGGATTAAATTTACCACACCCTTACCCTTCACCATCTTCTGGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR CCA 90 bp GTAACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTTCCTTCTGCCAGTCTTaGTGCCACCTAAGATTTGCT +
Preference number: 4 (lower is better)
Translates to: VTKSGTSRVYIPLNTPNTSFCQS*CHLRFA
Trigger: AGCAAATCTTAGGTGGCACCAAGACTGGCAGAAGGA...AGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp CTGGAAATTTTACAGCAACATTTGTTAATTCATCTGGATCCGAGGAAAGATCAAGCCTGCCTTCTTGTCTaGGTAAGAAAGCAACATCTC +
Preference number: 4 (lower is better)
Translates to: LEILQQHLLIHLDPRKDQACLLV*VRKQHL
Trigger: GAGATGTTGCTTTCTTACTCAGACAAGAAGGCAGGC...TTGATCTTTCCTCGGATCCAGATGAATTAACAAATGTTGCTGTAAAATTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp CAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGCTATATATTTCCAGTACCACTTTGGGATTTTaGTGGCATCATGAGACACTT +
Preference number: 4 (lower is better)
Translates to: QRVEAILMHHPNRLYISSTTLGF*WHHETL
Trigger: AAGTGTCTCATGATGCCATCAAAATCCCAAAGTGGT...ACTGGAAATATATAGCCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp TGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAAGCAGAAACTCAGCTCTCCATGGTCTaGGGAGTATATGACAATAGT +
Preference number: 4 (lower is better)
Translates to: CFHLINCSLLYWWTEAETQLSMV*GVYDNS
Trigger: ACTATTGTCATATACTCCTCAGACCATGGAGAGCTG...AGTTTCTGCTTCTGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp TTTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTGAGTTGAGGCAATATTaGTGCACCATCCGAATAGGC +
Preference number: 4 (lower is better)
Translates to: FLSVRLAKDKKTCIDGEIELRQY*CTIRIG
Trigger: GCCTATTCGGATGGTGCATCAATATTGCCTCAACTC...AATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp TTTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTCAAAAGCGGAACATGTaGACTAGCCTCGTACATGCT +
Preference number: 4 (lower is better)
Translates to: FLSVRLAKDKKTCIDGEIQKRNM*TSLVHA
Trigger: AGCATGTACGAGGCTAGTGCACATGTTCCGCTTTTG...AATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp CTGGATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATTTCCACTTGATAAACTaGTCTTTATTATACTGGTGG +
Preference number: 4 (lower is better)
Translates to: LDPRKDQRVEAILMHHPNFHLIN*SLLYWW
Trigger: CCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAA...ATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp CAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGCTATATATTTCCAGTACTCAGAATCCAGGGTaGATGCAGGTTTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: QRVEAILMHHPNRLYISSTQNPG*MQVFDF
Trigger: AAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGT...ACTGGAAATATATAGCCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp TGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTTGACTTTATGTTCATTCATTTTCATACTTCCTTaGTTCCTTCTGCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: WNSLRIQGGCRFLTLCSFIFILP*FLLPVL
Trigger: CAAGACTGGCAGAAGGAACCAAGGAAGTATGAAAAT...GAATGAACATAAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp TGTCCTATACTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAATTCTGTTAAGTGAGTaGAGAGGCCACTCCACATTG +
Preference number: 4 (lower is better)
Translates to: CPILCFHLINCSLLYWWTILLSE*RGHSTL
Trigger: CAATGTGGAGTGGCCTCTTCACTCACTTAACAGAAT...TGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAGTATAGGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp GTAACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTACCACTTTGGGATTTTaGTGGCATCATGAGACACTT +
Preference number: 4 (lower is better)
Translates to: VTKSGTSRVYIPLNTPNTTTLGF*WHHETL
Trigger: AAGTGTCTCATGATGCCATCAAAATCCCAAAGTGGT...AGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp AGTTTGAGAACTGTCATTCATAAGATGGCAACAAAATTCAGCTTCTCCTCTGCATCCTTCATTTGCCTTTaGTTACAAGAGCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: SLRTVIHKMATKFSFSSASFICL*LQEHSV
Trigger: TACAGAGTGCTCTTGTAATCAAAGGCAAATGAAGGA...TGCAGAGGAGAAGCTGAATTTTGTTGCCATCTTATGAATGACAGTTCTCAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR GCA 90 bp TATAAGAAGAGTAATAATCTACAGGGTGCATTTCTGACAAAGGTGACCACTTTGGCTTTGTCTGTATTCTaGCAATCCCTTTCCATCACT +
Preference number: 4 (lower is better)
Translates to: YKKSNNLQGAFLTKVTTLALSVF*QSLSIT
Trigger: AGTGATGGAAAGGGATTGGCAGAATACAGACAAAGC...CAAAGTGGTCACCTTTGTCAGAAATGCACCCTGTAGATTATTACTCTTCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512106.1
ENST00000513814.5
CDS-3UTR GCA 90 bp TTTCTCCAGAAGATGGTGAAGGGTAAGGGTGTGGTAAATTTAATCCCAAGTAAAAGAATCCAGGGTGGATaGAGGTTTTTGACTTTATGT +
Preference number: 4 (lower is better)
Translates to: FLQKMVKGKGVVNLIPSKRIQGG*RFLTLC
Trigger: ACATAAAGTCAAAAACCTGCATCCACCCTGGATTCT...TTTACTTGGGATTAAATTTACCACACCCTTACCCTTCACCATCTTCTGGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR GCA 90 bp CATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTACTTTTTGTTCAAACTaGTCTTGGATTCATATGGGT +
Preference number: 4 (lower is better)
Translates to: HSHYIHGIHSESRVDAGFTFCSN*SWIHMG
Trigger: ACCCATATGAATCCAAGAGCAGTTTGAACAAAAAGT...AAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp GTAACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTACTCAGAATCCAGGGTaGATGCAGGTTTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: VTKSGTSRVYIPLNTPNTTQNPG*MQVFDF
Trigger: AAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGT...AGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CCA 90 bp TCACTCAGAATCCAGGGTGGATGCAGGTTTTTGACTTTATGTTCATTCTTAAATACTCAGAATCCAGGGTaGATGCAGGTTTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: SLRIQGGCRFLTLCSFLNTQNPG*MQVFDF
Trigger: AAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGT...ATTTAAGAATGAACATAAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp TATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCATTCGAAGCATGTAGGTaGAGGCATTCACATTACATC +
Preference number: 4 (lower is better)
Translates to: YLLGWQRIRRHALMVRLSFEACR*RHSHYI
Trigger: GATGTAATGTGAATGCCTCCACCTACATGCTTCGAA...TGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CCA 90 bp CTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAGTTATTTTCATACTTCCTTaGTTCCTTCTGCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LLGWQRIRRHALMVRLSVIFILP*FLLPVL
Trigger: CAAGACTGGCAGAAGGAACCAAGGAAGTATGAAAAT...AACTGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp TTTCTCCAGAAGATGGTGAAGGGTAAGGGTGTGGTAAATTTAATCCCAAGTAAAATTTTGATGGCATCATaGGACACTTTTTCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: FLQKMVKGKGVVNLIPSKILMAS*DTFSSQ
Trigger: TTGGCTTGAAAAAGTGTCTCATGATGCCATCAAAAT...TTTACTTGGGATTAAATTTACCACACCCTTACCCTTCACCATCTTCTGGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512106.1
ENST00000513814.5
CDS-3UTR TCA 90 bp CTGGAAATTTTACAGCAACATTTGTTAATTCATCTGGATCCGAGGAAAGATCAAACCACTTTGGGATTTTaGTGGCATCATGAGACACTT +
Preference number: 4 (lower is better)
Translates to: LEILQQHLLIHLDPRKDQTTLGF*WHHETL
Trigger: AAGTGTCTCATGATGCCATCAAAATCCCAAAGTGGT...TTGATCTTTCCTCGGATCCAGATGAATTAACAAATGTTGCTGTAAAATTTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR TCA 90 bp AGTTTGAGAACTGTCATTCATAAGATGGCAACAAAATTCAGCTTCTCCTCTGCAAGCACCATACTAGTTTaGGAACTGTCATTCATAAGA +
Preference number: 4 (lower is better)
Translates to: SLRTVIHKMATKFSFSSASTILV*ELSFIR
Trigger: TCTTATGAATGACAGTTCTCAAACTAGTATGGTGCT...TGCAGAGGAGAAGCTGAATTTTGTTGCCATCTTATGAATGACAGTTCTCAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR GCA 90 bp TTTGATGGCATCATGAGACACTTTTTCAAGCCAATAAAGAGATGTGTGAAATGTGCTTTGTCTGTATTCTaGCAATCCCTTTCCATCACT +
Preference number: 4 (lower is better)
Translates to: FDGIMRHFFKPIKRCVKCALSVF*QSLSIT
Trigger: AGTGATGGAAAGGGATTGGCAGAATACAGACAAAGC...ACATTTCACACATCTCTTTATTGGCTTGAAAAAGTGTCTCATGATGCCATCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512106.1
ENST00000513814.5
CDS-3UTR GCA 90 bp TATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAAGAATCCAGGGTGGATaGAGGTTTTTGACTTTATGT +
Preference number: 4 (lower is better)
Translates to: YLLGWQRIRRHALMVRLSRIQGG*RFLTLC
Trigger: ACATAAAGTCAAAAACCTGCATCCACCCTGGATTCT...TGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CCA 90 bp AAGAGTAATAATCTACAGGGTGCATTTCTGACAAAGGTGACCACTTTGGGATTTTTCACATTACATCCATaGAATTCACTCAGAATCCAG +
Preference number: 4 (lower is better)
Translates to: KSNNLQGAFLTKVTTLGFFTLHP*NSLRIQ
Trigger: CTGGATTCTGAGTGAATTCCATGGATGTAATGTGAA...AAATCCCAAAGTGGTCACCTTTGTCAGAAATGCACCCTGTAGATTATTACTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR CCA 90 bp CTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAGTTTGCTCTTTATTATACTaGTGGACAGAAGCAGAAACT +
Preference number: 4 (lower is better)
Translates to: LLGWQRIRRHALMVRLSVCSLLY*WTEAET
Trigger: AGTTTCTGCTTCTGTCCACCAGTATAATAAAGAGCA...AACTGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CCA 90 bp CTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAAGCAGAAATTTTCATACTTCCTTaGTTCCTTCTGCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LCFHLINCSLLYWWTEAEIFILP*FLLPVL
Trigger: CAAGACTGGCAGAAGGAACCAAGGAAGTATGAAAAT...TTCTGCTTCTGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp AGTTTGAGAACTGTCATTCATAAGATGGCAACAAAATTCAGCTTCTCCTCTGCAATCTTTGGAAGTTTCTaGGATGTTGTGATCCACATT +
Preference number: 4 (lower is better)
Translates to: SLRTVIHKMATKFSFSSAIFGSF*DVVIHI
Trigger: AATGTGGATCACAACATCCCAGAAACTTCCAAAGAT...TGCAGAGGAGAAGCTGAATTTTGTTGCCATCTTATGAATGACAGTTCTCAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR TCA 90 bp TTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTAGAAAGATCAAAGAGTTaGGGCAATATTGATGCACCA +
Preference number: 4 (lower is better)
Translates to: FYLLGWQRIRRHALMVRLERSKS*GNIDAP
Trigger: TGGTGCATCAATATTGCCTCAACTCTTTGATCTTTC...TAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp GTAACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTCCCTTTTGTACCATTTaGAGCTTTTACCCTGTATAT +
Preference number: 4 (lower is better)
Translates to: VTKSGTSRVYIPLNTPNTPFCTI*SFYPVY
Trigger: ATATACAGGGTAAAAGCTTCAAATGGTACAAAAGGG...AGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp TGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAAGCAGAAACTACTTTTTCACTTCTTTaGTTAGTTGACCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: CFHLINCSLLYWWTEAETTFSLL*LVDPRS
Trigger: TGAACGTGGGTCAACTAATCAAAGAAGTGAAAAAGT...AGTTTCTGCTTCTGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR GCA 90 bp CTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAGTTTTCCACTTGATAAACTaGTCTTTATTATACTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLGWQRIRRHALMVRLSVFHLIN*SLLYWW
Trigger: CCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAA...AACTGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp CTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAGTTACTTTTTGTTCAAACTaGTCTTGGATTCATATGGGT +
Preference number: 4 (lower is better)
Translates to: LLGWQRIRRHALMVRLSVTFCSN*SWIHMG
Trigger: ACCCATATGAATCCAAGAGCAGTTTGAACAAAAAGT...AACTGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp TTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTAATGCAGAACAATGTGTaGAGTATGTTACCGTTTGTG +
Preference number: 4 (lower is better)
Translates to: FYLLGWQRIRRHALMVRLMQNNV*SMLPFV
Trigger: CACAAACGGTAACATACTGCACACATTGTTCTGCAT...TAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CCA 90 bp TATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCATTCACATTACATCCATaGAATTCACTCAGAATCCAG +
Preference number: 4 (lower is better)
Translates to: YLLGWQRIRRHALMVRLSFTLHP*NSLRIQ
Trigger: CTGGATTCTGAGTGAATTCCATGGATGTAATGTGAA...TGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR TCA 90 bp TTTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATTTTGATGGCATCATaGGACACTTTTTCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: FLSVRLAKDKKTCIDGEIILMAS*DTFSSQ
Trigger: TTGGCTTGAAAAAGTGTCTCATGATGCCATCAAAAT...AATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp CTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAAGCAGAATTCCACTTGATAAACTaGTCTTTATTATACTGGTGG +
Preference number: 4 (lower is better)
Translates to: LCFHLINCSLLYWWTEAEFHLIN*SLLYWW
Trigger: CCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAA...TTCTGCTTCTGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CCA 90 bp AAATGCCATCTAGTCAATTTCCAGTACTGCCCATTCTCTAAGTTTAAATCACAATATCTCAGTCATCTTTaGAAGTTTCTGGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: KCHLVNFQYCPFSKFKSQYLSHL*KFLGCC
Trigger: ACAACATCCCAGAAACTTCCAAAGATGACTGAGATA...TTGTGATTTAAACTTAGAGAATGGGCAGTACTGGAAATTGACTAGATGGCATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
3UTR CAA 72 bp TGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTaGACTTTATGTTCATTCTTAAATGTTTCTGATGAT +
Preference number: 4 (lower is better)
Translates to: WNSLRIQGGCRF*TLCSFLNVSDD
Trigger: ATCATCAGAAACATTTAAGAATGAACATAAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
3UTR CAA 72 bp TATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATaGATGGTGAGATTATCAGTTAGTATACCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: YLLGWQRIRRHA*MVRLSVSIPSL
Trigger: TAAAGAAGGTATACTAACTGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR GCA 90 bp TTTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTTCGAGCACCATCAAATaGTCACATACAACTATTTTA +
Preference number: 4 (lower is better)
Translates to: FLSVRLAKDKKTCIDGEISSTIK*SHTTIL
Trigger: TAAAATAGTTGTATGTGAGCATTTGATGGTGCTCGA...AATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS GCA 90 bp CAGCACCACATTGGGCGCTTTGGCTGCTCTCCGCCTCTGCTCCCCTaGTCCGGGGGCCAGTACCGCCAGCGCCAAGGCTGCGACCACCGA +
Preference number: 5 (lower is better)
Translates to: QHHIGRFGCSPPLLP*SGGQYRQRQGCDHR
Trigger: TCGGTGGTCGCAGCCTTGGCGCTGGCGGTACTGGCCCCCGGAGCAGGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGGTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380009.9
ENST00000504763.1
ENST00000504873.5
ENST00000513814.5
CDS GCA 90 bp CTCACGACCAGCACCACATTGGGCGCTTTGGCTGCTCTCCGCCTCTaGTCCCCTGCTCCGGGGGCCAGTACCGCCAGCGCCAAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: LTTSTTLGALAALRL*SPAPGASTASAKAA
Trigger: CGCAGCCTTGGCGCTGGCGGTACTGGCCCCCGGAGCAGGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGGTGCTGGTCGTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380009.9
ENST00000504763.1
ENST00000504873.5
ENST00000513814.5
CDS GCA 90 bp ATCGAAGGAGTCGCTCACGACCAGCACCACATTGGGCGCTTTGGCTaGTCTCCGCCTCTGCTCCCCTGCTCCGGGGGCCAGTACCGCCAG +
Preference number: 5 (lower is better)
Translates to: IEGVAHDQHHIGRFG*SPPLLPCSGGQYRQ
Trigger: CTGGCGGTACTGGCCCCCGGAGCAGGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGGTGCTGGTCGTGAGCGACTCCTTCGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380009.9
ENST00000504873.5
ENST00000513814.5
CDS GCA 90 bp AATGAAGGAGTCGCTCACGACCAGCACCACATTGGGCGCTTTGGCTaGTCTCCGCCTCTGCTCCCCTGCTCCGGGGGCCAGTACCGCCAG +
Preference number: 5 (lower is better)
Translates to: NEGVAHDQHHIGRFG*SPPLLPCSGGQYRQ
Trigger: CTGGCGGTACTGGCCCCCGGAGCAGGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGGTGCTGGTCGTGAGCGACTCCTTCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CAA 90 bp TGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATACCACATTGGGCGCTTaGGCTGCTCTCCGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: CSGAISGHCKLRLPGSRHTTLGA*AALRLC
Trigger: GCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGGT...ATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CAA 90 bp TGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATACGACCAGCACCACATaGGGCGCTTTGGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: CSGAISGHCKLRLPGSRHTTSTT*GALAAL
Trigger: GAGAGCAGCCAAAGCGCCCAATGTGGTGCTGGTCGT...ATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS GCA 90 bp AGCAGGGCAGGGACAGCGAACAACTCCCAAAGCTTGCAGTTTGGTTaGTTGATAGTAACGCCGAGCTTCACCCGCAGAACTACAACTCCT +
Preference number: 5 (lower is better)
Translates to: SRAGTANNSQSLQFG*LIVTPSFTRRTTTP
Trigger: AGGAGTTGTAGTTCTGCGGGTGAAGCTCGGCGTTACTATCAAGCAACCAAACTGCAAGCTTTGGGAGTTGTTCGCTGTCCCTGCCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp GGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGAGAGGCCACTCCACATaGCTGCGCGTGATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: GGIHITSMEFTQNPGWMQRGHST*LRVMGN
Trigger: GTTGCCCATCACGCGCAGCAATGTGGAGTGGCCTCT...CTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp ACCATGCCCCATTCTAGGAGCAGCCCACAACCAGTGGCCATCCAACATGCAGGTTTCTCCTCACTCCTATaGGAAAGCAGCTCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: TMPHSRSSPQPVAIQHAGFSSLL*ESSSEA
Trigger: TGCTTCAGAGCTGCTTTCCAATAGGAGTGAGGAGAA...ACCTGCATGTTGGATGGCCACTGGTTGTGGGCTGCTCCTAGAATGGGGCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CAA 90 bp GATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGACCACATTGGGCGCTTaGGCTGCTCTCCGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: DPRKDQRVEAILMHHPNRTTLGA*AALRLC
Trigger: GCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGGT...CCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp CTGGATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATACCACATTGGGCGCTTaGGCTGCTCTCCGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: LDPRKDQRVEAILMHHPNTTLGA*AALRLC
Trigger: GCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGGT...ATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp GATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGAGAGGCCACTCCACATaGCTGCGCGTGATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: DPRKDQRVEAILMHHPNRRGHST*LRVMGN
Trigger: GTTGCCCATCACGCGCAGCAATGTGGAGTGGCCTCT...CCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTATTCGGTACTTGCTTCTaGGAGGGGGAACTGGATGGC +
Preference number: 5 (lower is better)
Translates to: GREEGKDRDFTITVNPFVFGTCF*EGELDG
Trigger: GCCATCCAGTTCCCCCTCCAAGAAGCAAGTACCGAA...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp ACCATGCCCCATTCTAGGAGCAGCCCACAACCAGTGGCCATCCAACATGCAGGTTTTAGGAATGAACAATaGCCTCTGCTGAAGACAGCT +
Preference number: 5 (lower is better)
Translates to: TMPHSRSSPQPVAIQHAGFRNEQ*PLLKTA
Trigger: AGCTGTCTTCAGCAGAGGCAATTGTTCATTCCTAAA...ACCTGCATGTTGGATGGCCACTGGTTGTGGGCTGCTCCTAGAATGGGGCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CAA 90 bp TGCAGTGGTGCGATATCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATATATCTCAGTCATCTTaGGAAGTTTCTGGGATGTTG +
Preference number: 5 (lower is better)
Translates to: CSGAISGHCKLRLPGSRHISQSS*EVSGML
Trigger: CAACATCCCAGAAACTTCCAAAGATGACTGAGATAT...ATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGACCTGATATCGCACCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CAA 90 bp ACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTCCCACCACATTGGGCGCTTaGGCTGCTCTCCGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: TKSGTSRVYIPLNTPNTPTTLGA*AALRLC
Trigger: GCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGGT...GGGAGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTATTCCTTCTGCCAGTCTaGGTGCCACCTAAGATTTGC +
Preference number: 5 (lower is better)
Translates to: GREEGKDRDFTITVNPFVFLLPV*VPPKIC
Trigger: GCAAATCTTAGGTGGCACCAAGACTGGCAGAAGGAA...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp ACCATGCCCCATTCTAGGAGCAGCCCACAACCAGTGGCCATCCAACATGCAGGTAAGCACCATACTAGTTaGAGAACTGTCATTCATAAG +
Preference number: 5 (lower is better)
Translates to: TMPHSRSSPQPVAIQHAGKHHTS*RTVIHK
Trigger: CTTATGAATGACAGTTCTCAAACTAGTATGGTGCTT...ACCTGCATGTTGGATGGCCACTGGTTGTGGGCTGCTCCTAGAATGGGGCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CAA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTAAAGCTTGCAGTTTGGTaGCTTGATAGTAACGCCGAG +
Preference number: 5 (lower is better)
Translates to: GREEGKDRDFTITVNPFVKLAVW*LDSNAE
Trigger: CTCGGCGTTACTATCAAGCAACCAAACTGCAAGCTT...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp CAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGCTATATATTTCCAGTACGACCAGCACCACATaGGGCGCTTTGGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: QRVEAILMHHPNRLYISSTTSTT*GALAAL
Trigger: GAGAGCAGCCAAAGCGCCCAATGTGGTGCTGGTCGT...ACTGGAAATATATAGCCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp TTTCTCCAGAAGATGGTGAAGGGTAAGGGTGTGGTAAATTTAATCCCAAGTAAAACGACCAGCACCACATaGGGCGCTTTGGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: FLQKMVKGKGVVNLIPSKTTSTT*GALAAL
Trigger: GAGAGCAGCCAAAGCGCCCAATGTGGTGCTGGTCGT...TTTACTTGGGATTAAATTTACCACACCCTTACCCTTCACCATCTTCTGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR CAA 90 bp GTAACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTACGACCAGCACCACATaGGGCGCTTTGGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: VTKSGTSRVYIPLNTPNTTTSTT*GALAAL
Trigger: GAGAGCAGCCAAAGCGCCCAATGTGGTGCTGGTCGT...AGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTACAAGAGAAACCACATTaGATACTTGTAGGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: GREEGKDRDFTITVNPFVQEKPH*ILVGRL
Trigger: AAGCCGGCCTACAAGTATCAAATGTGGTTTCTCTTG...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp GCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTTCCTTCTGCCAGTCTaGGTGCCACCTAAGATTTGC +
Preference number: 5 (lower is better)
Translates to: AFTLHPWNSLRIQGGCRFFLLPV*VPPKIC
Trigger: GCAAATCTTAGGTGGCACCAAGACTGGCAGAAGGAA...AAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp TTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTAAGAGGCCACTCCACATaGCTGCGCGTGATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: FYLLGWQRIRRHALMVRLRGHST*LRVMGN
Trigger: GTTGCCCATCACGCGCAGCAATGTGGAGTGGCCTCT...TAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp CATGTAGGTGGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGCAAGAGAAACCACATTaGATACTTGTAGGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: HVGGGIHITSMEFTQNPGQEKPH*ILVGRL
Trigger: AAGCCGGCCTACAAGTATCAAATGTGGTTTCTCTTG...CCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS CCA 90 bp CAGGTTCTGAGGCAGAGGAATTCCAGCAATATCCCACTGGCCATGTaGACTTCAGCAAGTAATTTACTTATCTCAACCTCAGTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: QVLRQRNSSNIPLAM*TSASNLLISTSVFS
Trigger: TGAGAAAACTGAGGTTGAGATAAGTAAATTACTTGCTGAAGTCCACATGGCCAGTGGGATATTGCTGGAATTCCTCTGCCTCAGAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504873.5
CDS-3UTR CAA 90 bp CATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTAAGCTTGCAGTTTGGTaGCTTGATAGTAACGCCGAG +
Preference number: 5 (lower is better)
Translates to: HSHYIHGIHSESRVDAGFKLAVW*LDSNAE
Trigger: CTCGGCGTTACTATCAAGCAACCAAACTGCAAGCTT...AAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR CAA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTAAACAAATTGGAGAGTTaGTGTAGGCATTCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: GREEGKDRDFTITVNPFVNKLES*CRHSER
Trigger: CCTTTCTGAATGCCTACACAAACTCTCCAATTTGTT...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp GATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAGGCAAGAGAAACCACATTaGATACTTGTAGGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: DPRKDQRVEAILMHHPNRQEKPH*ILVGRL
Trigger: AAGCCGGCCTACAAGTATCAAATGTGGTTTCTCTTG...CCTATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp GGCAGGGAAGAGGGAAAGGACAGAGACTTCACGATCACTGTTAACCCTTTTGTAGTGCCCGGCCAAAACTaGGTAATTATTAAAACTGTT +
Preference number: 5 (lower is better)
Translates to: GREEGKDRDFTITVNPFVVPGQN*VIIKTV
Trigger: AACAGTTTTAATAATTACCAAGTTTTGGCCGGGCAC...TACAAAAGGGTTAACAGTGATCGTGAAGTCTCTGTCCTTTCCCTCTTCCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp CATGTAGGTGGAGGCATTCACATTACATCCATGGAATTCACTCAGAATCCAGGGAACAAATTGGAGAGTTaGTGTAGGCATTCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: HVGGGIHITSMEFTQNPGNKLES*CRHSER
Trigger: CCTTTCTGAATGCCTACACAAACTCTCCAATTTGTT...CCCTGGATTCTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp CTGGATCCGAGGAAAGATCAAAGAGTTGAGGCAATATTGATGCACCATCCGAATAACCAGTTTACTGCTTaGTCTGTATTCTGCCAATCC +
Preference number: 5 (lower is better)
Translates to: LDPRKDQRVEAILMHHPNNQFTA*SVFCQS
Trigger: GGATTGGCAGAATACAGACAAAGCAGTAAACTGGTT...ATTCGGATGGTGCATCAATATTGCCTCAACTCTTTGATCTTTCCTCGGATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp AAATGCCATCTAGTCAATTTCCAGTACTGCCCATTCTCTAAGTTTAAATCACAACTGAAGACAGCTGCTTaGCCCAACACCATGCCCCAT +
Preference number: 5 (lower is better)
Translates to: KCHLVNFQYCPFSKFKSQLKTAA*PNTMPH
Trigger: ATGGGGCATGGTGTTGGGCAAAGCAGCTGTCTTCAG...TTGTGATTTAAACTTAGAGAATGGGCAGTACTGGAAATTGACTAGATGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CAA 90 bp TTTCTCCAGAAGATGGTGAAGGGTAAGGGTGTGGTAAATTTAATCCCAAGTAAATTGCAGTTTGGTTGCTaGATAGTAACGCCGAGCTTC +
Preference number: 5 (lower is better)
Translates to: FLQKMVKGKGVVNLIPSKLQFGC*IVTPSF
Trigger: GAAGCTCGGCGTTACTATCAAGCAACCAAACTGCAA...TTTACTTGGGATTAAATTTACCACACCCTTACCCTTCACCATCTTCTGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR CAA 90 bp TCTACAGGGTGCATTTCTGACAAAGGTGACCACTTTGGGATTTTGATGGCATCAAACAAATTGGAGAGTTaGTGTAGGCATTCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: STGCISDKGDHFGILMASNKLES*CRHSER
Trigger: CCTTTCTGAATGCCTACACAAACTCTCCAATTTGTT...TGATGCCATCAAAATCCCAAAGTGGTCACCTTTGTCAGAAATGCACCCTGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512106.1
ENST00000513814.5
CDS-3UTR CAA 90 bp ACAAAATCAGGTACATCCAGGGTTTACATCCCGTTAAATACTCCAAATACTCCCGTGATGGGCAACAAATaGGAGAGTTTGTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: TKSGTSRVYIPLNTPNTPVMGNK*ESLCRH
Trigger: ATGCCTACACAAACTCTCCAATTTGTTGCCCATCAC...GGGAGTATTTGGAGTATTTAACGGGATGTAAACCCTGGATGTACCTGATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp TGGTCCCATCATCAAAAGCGGAACATGTGCACTAGCCTCGTACATGCTCATTTTGGTGGATGCAGGTTTTaGACTTTATGTTCATTCTTA +
Preference number: 5 (lower is better)
Translates to: WSHHQKRNMCTSLVHAHFGGCRF*TLCSFL
Trigger: TAAGAATGAACATAAAGTCAAAAACCTGCATCCACC...AAAATGAGCATGTACGAGGCTAGTGCACATGTTCCGCTTTTGATGATGGGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513814.5
CDS-3UTR CAA 90 bp CTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAAGCAGAATTCCTTCTGCCAGTCTaGGTGCCACCTAAGATTTGC +
Preference number: 5 (lower is better)
Translates to: LCFHLINCSLLYWWTEAEFLLPV*VPPKIC
Trigger: GCAAATCTTAGGTGGCACCAAGACTGGCAGAAGGAA...TTCTGCTTCTGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp AGTTCGAAGCATGTAGGTGGAGGCATTCACATTACATCCATGGAATTCACTCAGGTGCCCGGCCAAAACTaGGTAATTATTAAAACTGTT +
Preference number: 5 (lower is better)
Translates to: SSKHVGGGIHITSMEFTQVPGQN*VIIKTV
Trigger: AACAGTTTTAATAATTACCAAGTTTTGGCCGGGCAC...CTGAGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACATGCTTCGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp ACATTACATCCATGGAATTCACTCAGAATCCAGGGTGGATGCAGGTTTTTGACTAACAAATTGGAGAGTTaGTGTAGGCATTCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: TLHPWNSLRIQGGCRFLTNKLES*CRHSER
Trigger: CCTTTCTGAATGCCTACACAAACTCTCCAATTTGTT...AGTCAAAAACCTGCATCCACCCTGGATTCTGAGTGAATTCCATGGATGTAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp TTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATTGCAGTTTGGTTGCTaGATAGTAACGCCGAGCTTC +
Preference number: 5 (lower is better)
Translates to: FYLLGWQRIRRHALMVRLLQFGC*IVTPSF
Trigger: GAAGCTCGGCGTTACTATCAAGCAACCAAACTGCAA...TAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp CTGTCCTATACTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACGTGATGGGCAACAAATaGGAGAGTTTGTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: LSYTLFPLDKLLFIILVDVMGNK*ESLCRH
Trigger: ATGCCTACACAAACTCTCCAATTTGTTGCCCATCAC...GTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAGTATAGGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp TATAAGAAGAGTAATAATCTACAGGGTGCATTTCTGACAAAGGTGACCACTTTGGTGATGGGCAACAAATaGGAGAGTTTGTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: YKKSNNLQGAFLTKVTTLVMGNK*ESLCRH
Trigger: ATGCCTACACAAACTCTCCAATTTGTTGCCCATCAC...CAAAGTGGTCACCTTTGTCAGAAATGCACCCTGTAGATTATTACTCTTCTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512106.1
ENST00000513814.5
CDS-3UTR CAA 90 bp TATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAAGAGTTGAGGCAATATaGATGCACCATCCGAATAGG +
Preference number: 5 (lower is better)
Translates to: YLLGWQRIRRHALMVRLSRVEAI*MHHPNR
Trigger: CCTATTCGGATGGTGCATCAATATTGCCTCAACTCT...TGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp CTGTCCTATACTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGAGTTGAGGCAATATaGATGCACCATCCGAATAGG +
Preference number: 5 (lower is better)
Translates to: LSYTLFPLDKLLFIILVDRVEAI*MHHPNR
Trigger: CCTATTCGGATGGTGCATCAATATTGCCTCAACTCT...GTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAGTATAGGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp TTTTGTTCAAACTGCTCTTGGATTCATATGGGTTTTAAGCCACTGATCAATTGCAGAGTTGAGGCAATATaGATGCACCATCCGAATAGG +
Preference number: 5 (lower is better)
Translates to: FCSNCSWIHMGFKPLINCRVEAI*MHHPNR
Trigger: CCTATTCGGATGGTGCATCAATATTGCCTCAACTCT...GCAATTGATCAGTGGCTTAAAACCCATATGAATCCAAGAGCAGTTTGAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp TGTCCTATACTTTGTTTCCACTTGATAAACTGCTCTTTATTATACTGGTGGACAGTGATGGGCAACAAATaGGAGAGTTTGTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: CPILCFHLINCSLLYWWTVMGNK*ESLCRH
Trigger: ATGCCTACACAAACTCTCCAATTTGTTGCCCATCAC...TGTCCACCAGTATAATAAAGAGCAGTTTATCAAGTGGAAACAAAGTATAGGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp TCACTCAGAATCCAGGGTGGATGCAGGTTTTTGACTTTATGTTCATTCTTAAATAACCAGTTTACTGCTTaGTCTGTATTCTGCCAATCC +
Preference number: 5 (lower is better)
Translates to: SLRIQGGCRFLTLCSFLNNQFTA*SVFCQS
Trigger: GGATTGGCAGAATACAGACAAAGCAGTAAACTGGTT...ATTTAAGAATGAACATAAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp AGTTTGAGAACTGTCATTCATAAGATGGCAACAAAATTCAGCTTCTCCTCTGCATTCCTTCATTTGCCTTaGATTACAAGAGCACTCTGT +
Preference number: 5 (lower is better)
Translates to: SLRTVIHKMATKFSFSSAFLHLP*ITRALC
Trigger: ACAGAGTGCTCTTGTAATCAAAGGCAAATGAAGGAA...TGCAGAGGAGAAGCTGAATTTTGTTGCCATCTTATGAATGACAGTTCTCAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CAA 90 bp TTTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTAACAACTCCCAAAGCTaGCAGTTTGGTTGCTTGATA +
Preference number: 5 (lower is better)
Translates to: FLSVRLAKDKKTCIDGEINNSQS*QFGCLI
Trigger: TATCAAGCAACCAAACTGCAAGCTTTGGGAGTTGTT...AATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp TTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTAAACCAGTTTACTGCTTaGTCTGTATTCTGCCAATCC +
Preference number: 5 (lower is better)
Translates to: FYLLGWQRIRRHALMVRLNQFTA*SVFCQS
Trigger: GGATTGGCAGAATACAGACAAAGCAGTAAACTGGTT...TAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp TTTGATGGCATCATGAGACACTTTTTCAAGCCAATAAAGAGATGTGTGAAATGTAACCAGTTTACTGCTTaGTCTGTATTCTGCCAATCC +
Preference number: 5 (lower is better)
Translates to: FDGIMRHFFKPIKRCVKCNQFTA*SVFCQS
Trigger: GGATTGGCAGAATACAGACAAAGCAGTAAACTGGTT...ACATTTCACACATCTCTTTATTGGCTTGAAAAAGTGTCTCATGATGCCATCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512106.1
ENST00000513814.5
CDS-3UTR CAA 90 bp TCACTCAGAATCCAGGGTGGATGCAGGTTTTTGACTTTATGTTCATTCTTAAATGTGCCCGGCCAAAACTaGGTAATTATTAAAACTGTT +
Preference number: 5 (lower is better)
Translates to: SLRIQGGCRFLTLCSFLNVPGQN*VIIKTV
Trigger: AACAGTTTTAATAATTACCAAGTTTTGGCCGGGCAC...ATTTAAGAATGAACATAAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp AAATGCCATCTAGTCAATTTCCAGTACTGCCCATTCTCTAAGTTTAAATCACAATCCTGCTTCCTTCATTaGCCTTTGATTACAAGAGCA +
Preference number: 5 (lower is better)
Translates to: KCHLVNFQYCPFSKFKSQSCFLH*PLITRA
Trigger: TGCTCTTGTAATCAAAGGCAAATGAAGGAAGCAGGA...TTGTGATTTAAACTTAGAGAATGGGCAGTACTGGAAATTGACTAGATGGCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS-3UTR CAA 90 bp TCACTCAGAATCCAGGGTGGATGCAGGTTTTTGACTTTATGTTCATTCTTAAATGGTGGATGCAGGTTTTaGACTTTATGTTCATTCTTA +
Preference number: 5 (lower is better)
Translates to: SLRIQGGCRFLTLCSFLNGGCRF*TLCSFL
Trigger: TAAGAATGAACATAAAGTCAAAAACCTGCATCCACC...ATTTAAGAATGAACATAAAGTCAAAAACCTGCATCCACCCTGGATTCTGAGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504873.5
ENST00000513814.5
CDS-3UTR CAA 90 bp TATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTATCAACCCTTTTGTACCATTaGAAGCTTTTACCCTGTATA +
Preference number: 5 (lower is better)
Translates to: YLLGWQRIRRHALMVRLSTLLYH*KLLPCI
Trigger: TATACAGGGTAAAAGCTTCAAATGGTACAAAAGGGT...TGATAATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS-3UTR CAA 90 bp TTTTTATCTGTTAGGTTGGCAAAGGATAAGAAGACATGCATTGATGGTGAGATTGGTGGATGCAGGTTTTaGACTTTATGTTCATTCTTA +
Preference number: 5 (lower is better)
Translates to: FLSVRLAKDKKTCIDGEIGGCRF*TLCSFL
Trigger: TAAGAATGAACATAAAGTCAAAAACCTGCATCCACC...AATCTCACCATCAATGCATGTCTTCTTATCCTTTGCCAACCTAACAGATAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS GCA 72 bp ATTGGGCGCTTTGGCTGCTCTCCGCCTCTGCTCCCCTaGTCCGGGGGCCAGTACCGCCAGCGCCAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: IGRFGCSPPLLP*SGGQYRQRQGC
Trigger: GCAGCCTTGGCGCTGGCGGTACTGGCCCCCGGAGCAGGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380009.9
ENST00000504763.1
ENST00000504873.5
ENST00000513814.5
CDS GCA 72 bp AGCACCACATTGGGCGCTTTGGCTGCTCTCCGCCTCTaGTCCCCTGCTCCGGGGGCCAGTACCGCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: STTLGALAALRL*SPAPGASTASA
Trigger: GGCGCTGGCGGTACTGGCCCCCGGAGCAGGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGGTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380009.9
ENST00000504763.1
ENST00000504873.5
ENST00000513814.5
CDS GCA 72 bp ACAGCAGTAGCATCGCCGGTAGCGGTTCTGAGAGCCTaGCGCCGGGCCAGCCGCCTCCCTCTGGCGTTCTCT +
Preference number: 6 (lower is better)
Translates to: TAVASPVAVLRA*RRASRLPLAFS
Trigger: AGAGAACGCCAGAGGGAGGCGGCTGGCCCGGCGGCAGGCTCTCAGAACCGCTACCGGCGATGCTACTGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380009.9
ENST00000504763.1
ENST00000504873.5
ENST00000513814.5
CDS CCA 72 bp TTCCATCGAAGGAGTCGCTCACGACCAGCACCACATTaGGCGCTTTGGCTGCTCTCCGCCTCTGCTCCCCTG +
Preference number: 6 (lower is better)
Translates to: FHRRSRSRPAPH*ALWLLSASAPL
Trigger: CAGGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGGTGCTGGTCGTGAGCGACTCCTTCGATGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380009.9
ENST00000504873.5
ENST00000513814.5
CDS CAA 72 bp CTTCCATCGAAGGAGTCGCTCACGACCAGCACCACATaGGGCGCTTTGGCTGCTCTCCGCCTCTGCTCCCCT +
Preference number: 6 (lower is better)
Translates to: LPSKESLTTSTT*GALAALRLCSP
Trigger: AGGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGGTGCTGGTCGTGAGCGACTCCTTCGATGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380009.9
ENST00000504873.5
ENST00000513814.5
CDS CAA 72 bp TCAGGAATGAAGGAGTCGCTCACGACCAGCACCACATaGGGCGCTTTGGCTGCTCTCCGCCTCTGCTCCCCT +
Preference number: 6 (lower is better)
Translates to: SGMKESLTTSTT*GALAALRLCSP
Trigger: AGGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCAATGTGGTGCTGGTCGTGAGCGACTCCTTCATTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504763.1
CDS CAA 90 bp GAGCAGGGCAGGGACAGCGAACAACTCCCAAAGCTTGCAGTTTGGTaGCTTGATAGTAACGCCGAGCTTCACCCGCAGAACTACAACTCC +
Preference number: 6 (lower is better)
Translates to: EQGRDSEQLPKLAVW*LDSNAELHPQNYNS
Trigger: GGAGTTGTAGTTCTGCGGGTGAAGCTCGGCGTTACTATCAAGCAACCAAACTGCAAGCTTTGGGAGTTGTTCGCTGTCCCTGCCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS CAA 90 bp AGGGCAGGGACAGCGAACAACTCCCAAAGCTTGCAGTTTGGTTGCTaGATAGTAACGCCGAGCTTCACCCGCAGAACTACAACTCCTATC +
Preference number: 6 (lower is better)
Translates to: RAGTANNSQSLQFGC*IVTPSFTRRTTTPI
Trigger: GATAGGAGTTGTAGTTCTGCGGGTGAAGCTCGGCGTTACTATCAAGCAACCAAACTGCAAGCTTTGGGAGTTGTTCGCTGTCCCTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380009.9
CDS CAA 72 bp GCTTCCACACGATTACTGCGCGTGATGGGCAACAAATaGGAGAGTTTGTGTAGGCATTCAGAAAGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: ASTRLLRVMGNK*ESLCRHSERKS
Trigger: GGACTTCCTTTCTGAATGCCTACACAAACTCTCCAATTTGTTGCCCATCACGCGCAGTAATCGTGTGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512106.1
CDS TCA 72 bp CCACGCTTCCACACGATTACTAATGGAGTGATGTCCTaGAGTATAGTCCAGTTTCCCAAATTTCTGTGTTCG +
Preference number: 6 (lower is better)
Translates to: PRFHTITNGVMS*SIVQFPKFLCS
Trigger: CGAACACAGAAATTTGGGAAACTGGACTATACTTCAGGACATCACTCCATTAGTAATCGTGTGGAAGCGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380009.9
ENST00000504873.5
CDS CCA 72 bp AGGCAGAGGAATTCCAGCAATATCCCACTGGCCATGTaGACTTCAGCAAGTAATTTACTTATCTCAACCTCA +
Preference number: 6 (lower is better)
Translates to: RQRNSSNIPLAM*TSASNLLISTS
Trigger: TGAGGTTGAGATAAGTAAATTACTTGCTGAAGTCCACATGGCCAGTGGGATATTGCTGGAATTCCTCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504873.5
CDS TCA 72 bp TCCCAAATTTCTGTGTTCGGTAGCCATGCCTCTCCATaGCATCCATCCATGTTGTATAATTTGGATCTAGAC +
Preference number: 6 (lower is better)
Translates to: SQISVFGSHASP*HPSMLYNLDLD
Trigger: GTCTAGATCCAAATTATACAACATGGATGGATGTCATGGAGAGGCATGGCTACCGAACACAGAAATTTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380009.9
ENST00000504873.5
ENST00000513814.5