RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARSI (Homo sapiens)

Ensembl gene IDs: ENSG00000183876

Ensembl transcript IDs: ENST00000328668.8, ENST00000509146.1, ENST00000515301.2

Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGGGTACTGGAGGGGCCAGAAGAGGAATTTTGCACCACGGTGCCTaGCACCAGTCTGACCGGAGGACTGGCCTAGGCCATGTGAAGACC +
Preference number: 1 (lower is better)
Translates to: LGTGGARRGILHHGA*HQSDRRTGLGHVKT
Trigger: GGTCTTCACATGGCCTAGGCCAGTCCTCCGGTCAGACTGGTGTCAGGCACCGTGGTGCAAAATTCCTCTTCTGGCCCCTCCAGTACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR GCA 90 bp GAGCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTaGCTCCAGGCAACTCCCAAACACCACCACAGGGATCCCGTGTTA +
Preference number: 1 (lower is better)
Translates to: EQPDCHASAGGQAWS*LQATPKHHHRDPVL
Trigger: TAACACGGGATCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CCA 90 bp TGTAGAGAGCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTaGAGTTGCCTCCAGGCAACTCCCAAACACCACCACAGGGATCCC +
Preference number: 1 (lower is better)
Translates to: CREQPDCHASAGGQA*SCLQATPKHHHRDP
Trigger: GGGATCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGCTCTCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CCA 90 bp CTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTGGTTTaGGGGCTCTTCACAGCTCTTTCTACCACCCTTGGTGCTGCAGCA +
Preference number: 1 (lower is better)
Translates to: LCPRSQENPGVLVLV*GLFTALSTTLGAAA
Trigger: TGCTGCAGCACCAAGGGTGGTAGAAAGAGCTGTGAAGAGCCCCCAAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR TCA 90 bp AGGGGCCAGAAGAGGAATTTTGCACCACGGTGCCTGACACCAGTCTaGCCGGAGGACTGGCCTAGGCCATGTGAAGACCCAAGAAGGTCA +
Preference number: 1 (lower is better)
Translates to: RGQKRNFAPRCLTPV*PEDWPRPCEDPRRS
Trigger: TGACCTTCTTGGGTCTTCACATGGCCTAGGCCAGTCCTCCGGTCAGACTGGTGTCAGGCACCGTGGTGCAAAATTCCTCTTCTGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CCA 90 bp CTTAAAGGAGTTGTCAAGTGGCAAGGCCGGCCAGGAACTCCACCGTaGCCCCAGGCTCCAGGGCCACACCAAAGAGTCACAAAGTCATTA +
Preference number: 1 (lower is better)
Translates to: LKGVVKWQGRPGTPP*PQAPGPHQRVTKSL
Trigger: TAATGACTTTGTGACTCTTTGGTGTGGCCCTGGAGCCTGGGGCCACGGTGGAGTTCCTGGCCGGCCTTGCCACTTGACAACTCCTTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CCA 90 bp CTTGGTGCTGCAGCAGTTAATGGCCCAGCCAGTTTCTCTGGGTACTaGAGGGGCCAGAAGAGGAATTTTGCACCACGGTGCCTGACACCA +
Preference number: 1 (lower is better)
Translates to: LGAAAVNGPASFSGY*RGQKRNFAPRCLTP
Trigger: TGGTGTCAGGCACCGTGGTGCAAAATTCCTCTTCTGGCCCCTCCAGTACCCAGAGAAACTGGCTGGGCCATTAACTGCTGCAGCACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CCA 90 bp AAGAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTaGTTTGGGGGCTCTTCACAGCTCTTTCTACCACCCTTGGTGCTG +
Preference number: 1 (lower is better)
Translates to: KNCAPGHRRTQVSWY*FGGSSQLFLPPLVL
Trigger: CAGCACCAAGGGTGGTAGAAAGAGCTGTGAAGAGCCCCCAAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR-3UTR TCA 90 bp GCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTGCCTCCAGGCCTCATGTGGGTCACCTaGGGTCACAGAGCAAGTCCG +
Preference number: 2 (lower is better)
Translates to: AARLPCFSWGPGLELPPGLMWVT*GHRASP
Trigger: CGGACTTGCTCTGTGACCTCAGGTGACCCACATGAG...GCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR-3UTR CCA 90 bp TCCTCCACAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGGGGCCAGGCTTaGAGTTGCCTCCAGGCAACT +
Preference number: 2 (lower is better)
Translates to: SSTTLASLPEPHEGGRARAGGQA*SCLQAT
Trigger: AGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCAGC...CCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGTGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CAA 90 bp AGAGCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAGTaGCCTCCAGGCAACTCCCAAACACCACCACAGGGATCCCGTGTT +
Preference number: 2 (lower is better)
Translates to: RAARLPCFSWGPGLE*PPGNSQTPPQGSRV
Trigger: AACACGGGATCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR-3UTR GCA 90 bp GAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTGGTTTGGGGGGGCCAGGCTTGGAGTTaGCTCCAGGCAACTCCCAAA +
Preference number: 2 (lower is better)
Translates to: ELCPRSQENPGVLVLVWGGQAWS*LQATPK
Trigger: TTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCC...CCCCCAAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CAA 90 bp ACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTGGTTaGGGGGCTCTTCACAGCTCTTTCTACCACCCTTGGTGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: TVPQVTGEPRCPGTG*GALHSSFYHPWCCS
Trigger: GCTGCAGCACCAAGGGTGGTAGAAAGAGCTGTGAAGAGCCCCCAAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGCACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR-3UTR CCA 90 bp GGGGCCAGGCTTGGAGTTGCCTCCAGGCAACTCCCAAACACCACCACAGGGATCACAGGCATCCCAGTCTaGTTTATTCCCACCCACTCC +
Preference number: 2 (lower is better)
Translates to: GARLGVASRQLPNTTTGITGIPV*FIPTHS
Trigger: GGAGTGGGTGGGAATAAACCAGACTGGGATGCCTGT...GATCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR-3UTR CCA 90 bp CAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGCAGTCCTGGTACTGGTTTaGGGGCTCTTCACAGCTCTT +
Preference number: 2 (lower is better)
Translates to: QPWPVFQSLMKEAEPGLAVLVLV*GLFTAL
Trigger: AAGAGCTGTGAAGAGCCCCCAAACCAGTACCAGGAC...TGCCAGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR-3UTR CCA 90 bp AGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCCCTGTAGAAGGGCCAAGCCGGAGTaGGGAAGATCCTCTAAAGGA +
Preference number: 2 (lower is better)
Translates to: RLPTLFNQGTLHPPTPCRRAKPE*GRSSKG
Trigger: TCCTTTAGAGGATCTTCCCCACTCCGGCTTGGCCCT...TCTACAGGGAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR-3UTR CCA 90 bp TCAAGGCCTAGAGGGCAAGAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCCAACTCCCTGTAGATaGAGATGTGACAGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: SRPRGQELCPRSQENPGVPTPCR*RCDRLL
Trigger: GAGAAGCCTGTCACATCTCCATCTACAGGGAGTTGG...GACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTCTTGCCCTCTAGGCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CAA 90 bp CCATGTTACGACACTTTAATCAAGTTCACAAGCTCCTCCACAACCTaGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: PCYDTLIKFTSSSTT*ASLPEPHEGGRARA
Trigger: AGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGTGGAGGAGCTTGTGAACTTGATTAAAGTGTCGTAACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CCA 72 bp CAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTaGAGTTGCCTCCAGGCAACTCCCAAACACCACCAC +
Preference number: 3 (lower is better)
Translates to: QPDCHASAGGQA*SCLQATPKHHH
Trigger: GTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR GCA 72 bp GATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTaGCTCCAGGCAACTCCCAAACACCACCACAGGGAT +
Preference number: 3 (lower is better)
Translates to: DCHASAGGQAWS*LQATPKHHHRD
Trigger: ATCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CCA 72 bp GCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTaGTTTGGGGGCTCTTCACAGCTCTTTCTACCACCC +
Preference number: 3 (lower is better)
Translates to: APGHRRTQVSWY*FGGSSQLFLPP
Trigger: GGGTGGTAGAAAGAGCTGTGAAGAGCCCCCAAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR TCA 72 bp AAGAGGAATTTTGCACCACGGTGCCTGACACCAGTCTaGCCGGAGGACTGGCCTAGGCCATGTGAAGACCCA +
Preference number: 3 (lower is better)
Translates to: KRNFAPRCLTPV*PEDWPRPCEDP
Trigger: TGGGTCTTCACATGGCCTAGGCCAGTCCTCCGGTCAGACTGGTGTCAGGCACCGTGGTGCAAAATTCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR GCA 72 bp TTTCTCTGGGTACTGGAGGGGCCAGAAGAGGAATTTTaGACCACGGTGCCTGACACCAGTCTGACCGGAGGA +
Preference number: 3 (lower is better)
Translates to: FLWVLEGPEEEF*TTVPDTSLTGG
Trigger: TCCTCCGGTCAGACTGGTGTCAGGCACCGTGGTGCAAAATTCCTCTTCTGGCCCCTCCAGTACCCAGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp GCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTGCCTCCAGGCAGGCCCGCGCCGAGCTaGCTCCCGCTGCCTAAGCGC +
Preference number: 4 (lower is better)
Translates to: AARLPCFSWGPGLELPPGRPAPS*LPLPKR
Trigger: GCGCTTAGGCAGCGGGAGGCAGCTCGGCGCGGGCCT...GCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTGCCTCCAGGCTGGCTGCCGGACGGCTaGGCCGGATCTGCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: AARLPCFSWGPGLELPPGWLPDG*AGSARP
Trigger: CGGCCGAGCAGATCCGGCCCAGCCGTCCGGCAGCCA...GCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp GGTGCTGCAGCAGTTAATGGCCCAGCCAGTTTCTCTGGGTACTGGAGGGGCCAGAGGCCCGGCCCTCGCTaGTGGCCGGCCACACGTCGT +
Preference number: 4 (lower is better)
Translates to: GAAAVNGPASFSGYWRGQRPGPR*WPATRR
Trigger: ACGACGTGTGGCCGGCCATCAGCGAGGGCCGGGCCT...CTGGCCCCTCCAGTACCCAGAGAAACTGGCTGGGCCATTAACTGCTGCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTGCCTCCAGGCGAGGGAGGCACAAGTTaGGCGGGTCGAGGGGACACG +
Preference number: 4 (lower is better)
Translates to: AARLPCFSWGPGLELPPGEGGTS*AGRGDT
Trigger: CGTGTCCCCTCGACCCGCCCAACTTGTGCCTCCCTC...GCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp CCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTGCCTCCAGGCAACTCCCAAACATGTCTGGTCCGGGACTaGCTGCCGGACGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PCFSWGPGLELPPGNSQTCLVRD*LPDGWA
Trigger: GGCCCAGCCGTCCGGCAGCCAGTCCCGGACCAGACA...TGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTGCCTCCAGGCCGAAGCCCCGACGGGTaGGCAGACACTCCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: AARLPCFSWGPGLELPPGRSPDG*ADTPSG
Trigger: ACCGGAAGGAGTGTCTGCCCACCCGTCGGGGCTTCG...GCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTGCCTCCAGGCCCATGCAGGTCACCATaGCCGCGTACTTCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: AARLPCFSWGPGLELPPGPCRSP*PRTSAG
Trigger: CCCGGCGGAAGTACGCGGCCATGGTGACCTGCATGG...GCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp CCACCGTGGCCCCAGGCTCCAGGGCCACACCAAAGAGTCACAAAGTCATTAGAGTCAGCCCGGCCAGCCTaGGACGCGGCGTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PPWPQAPGPHQRVTKSLESARPA*DAAWQL
Trigger: AAGCTGCCACGCCGCGTCTCAGGCTGGCCGGGCTGA...CTCTAATGACTTTGTGACTCTTTGGTGTGGCCCTGGAGCCTGGGGCCACGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TCCTCCACAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGCGAGCTGCCTCCCGCTaGCTAAGCGCAGGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: SSTTLASLPEPHEGGRARRAASR*LSAGPA
Trigger: CGCAGGGCCTGCGCTTAGGCAGCGGGAGGCAGCTCG...CCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGTGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GGGGCCAGGCTTGGAGTTGCCTCCAGGCAACTCCCAAACACCACCACAGGGATCCTGCCAGTGAGGAGCTaGCTCCGCGAAGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: GARLGVASRQLPNTTTGILPVRS*LREGVQ
Trigger: CTGCACGCCTTCGCGGAGCCAGCTCCTCACTGGCAG...GATCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp TGGGGGCCAGGCTTGGAGTTGCCTCCAGGCAACTCCCAAACACCACCACAGGGAACTCACCCACGCGGATaGCAGCCTGCACGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: WGPGLELPPGNSQTPPQGTHPRG*QPARRC
Trigger: ACACCGCCGTGCAGGCTGCCATCCGCGTGGGTGAGT...TCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp GGTCCCTGTAGAGAGCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGTGCCTGACACCAGTCTaGCCGGAGGACTGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: GPCREQPDCHASAGGQAWCLTPV*PEDWPR
Trigger: CCTAGGCCAGTCCTCCGGTCAGACTGGTGTCAGGCA...CCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGCTCTCTACAGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp CAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGCAAAGCCAGTGAGGGTGTaGATCGCCAAGCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QPWPVFQSLMKEAEPGLAKPVRV*IAKPAR
Trigger: GCGGGCCGGCTTGGCGATGCACACCCTCACTGGCTT...TGCCAGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp CAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGCAGCTGAGGGCTGTGGCTaGCCAGGATATGGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: QPWPVFQSLMKEAEPGLAAEGCG*PGYGWR
Trigger: GCGCCAGCCATATCCTGGCCAGCCACAGCCCTCAGC...TGCCAGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp ACAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGCCCAGGGAGAAGCCAGTaGGGGTGTGCATCGCCAAGC +
Preference number: 4 (lower is better)
Translates to: TTLASLPEPHEGGRARAGPGRSQ*GCASPS
Trigger: GCTTGGCGATGCACACCCTCACTGGCTTCTCCCTGG...GCCAGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp CACTCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAATGGTCCGGGACTGGCTaGCGGACGGCTGGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: HSYPGSLPCSTKGLYTLQWSGTG*RTAGPD
Trigger: ATCCGGCCCAGCCGTCCGGCAGCCAGTCCCGGACCA...TTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp CCGTGGCCCCAGGCTCCAGGGCCACACCAAAGAGTCACAAAGTCATTAGAGCTCGGAGCGGCCAGTTGCTaGCCCCCGAGAAAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PWPQAPGPHQRVTKSLELGAASC*PPRKSG
Trigger: GCCAGACTTTCTCGGGGGGCAGCAACTGGCCGCTCC...GAGCTCTAATGACTTTGTGACTCTTTGGTGTGGCCCTGGAGCCTGGGGCCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TCAAGGCCTAGAGGGCAAGAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCTGTGCAGGATCTCCGTaGGTGGTGAGGCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SRPRGQELCPRSQENPGVCAGSP*VVRPGP
Trigger: AGGGCCGGGCCTCACCACGCACGGAGATCCTGCACA...GACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTCTTGCCCTCTAGGCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp GCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTGCCTCCAGGCGCTGGCATCCCCACTTaGAGGTGGGGAAATCAAGGC +
Preference number: 4 (lower is better)
Translates to: AARLPCFSWGPGLELPPGAGIPT*RWGNQG
Trigger: GCCTTGATTTCCCCACCTGCAAGTGGGGATGCCAGC...GCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp CCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTGCCTCCAGGCAACTCCCAAACACCACGAAGCTCGGCTTaGCCCAGTCCCAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: PCFSWGPGLELPPGNSQTPRSSA*PSPRTG
Trigger: ACCTGTCCTGGGACTGGGCCAAGCCGAGCTTCGTGG...TGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp TGGGGGCCAGGCTTGGAGTTGCCTCCAGGCAACTCCCAAACACCACCACAGGGATGTGGCAGTGTCACCTaGTCCAGGGGCAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: WGPGLELPPGNSQTPPQGCGSVT*SRGRQL
Trigger: CAACTGCCTGCCCCTGGACCAGGTGACACTGCCACA...TCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GGTGCTGCAGCAGTTAATGGCCCAGCCAGTTTCTCTGGGTACTGGAGGGGCCAGAGCTACCCGGGAAGGTaGCCAGTGTCTGCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GAAAVNGPASFSGYWRGQSYPGR*PVSAVG
Trigger: TCCCACCGCAGACACTGGCCACCTTCCCGGGTAGCT...CTGGCCCCTCCAGTACCCAGAGAAACTGGCTGGGCCATTAACTGCTGCAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp ACAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGCCCTCTTCCTCATCACTaGCCCAGGGCCCCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: TTLASLPEPHEGGRARAGPLPHH*PRAPKH
Trigger: GTGCTTGGGGGCCCTGGGCCAGTGATGAGGAAGAGG...GCCAGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp GCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTGCCTCCAGGCAGGGGTCTCGATATCTaGACCATGGTAGCCCACGTC +
Preference number: 4 (lower is better)
Translates to: AARLPCFSWGPGLELPPGRGLDI*TMVAHV
Trigger: GACGTGGGCTACCATGGTTCAGATATCGAGACCCCT...GCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TTTCTACCACCCTTGGTGCTGCAGCAGTTAATGGCCCAGCCAGTTTCTCTGGGTGCCCGCCGGCTCGGATaGTGCGAGGGAGTTCAGCGC +
Preference number: 4 (lower is better)
Translates to: FLPPLVLQQLMAQPVSLGARRLG*CEGVQR
Trigger: GCGCTGAACTCCCTCGCAGCATCCGAGCCGGCGGGC...ACCCAGAGAAACTGGCTGGGCCATTAACTGCTGCAGCACCAAGGGTGGTAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp CAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGCAGGCAGGCAGTTGGGCTaGTGTGGGCGGATGATGGAA +
Preference number: 4 (lower is better)
Translates to: QPWPVFQSLMKEAEPGLAGRQLG*CGRMME
Trigger: TTCCATCATCCGCCCACAGCAGCCCAACTGCCTGCC...TGCCAGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp GAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTGGTTTGGGGGCCCAATAAGTGCCCTTaGGTCCTCGGAGCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: ELCPRSQENPGVLVLVWGPNKCP*VLGAAS
Trigger: ACTGGCCGCTCCGAGGACGCAAGGGCACTTATTGGG...CCCCCAAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp AAATCAAGGCCTAGAGGGCAAGAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGGACGGTCCAGTGTCTaGTCCGGGACTGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: KSRPRGQELCPRSQENPGGRSSV*SGTGCR
Trigger: CCGGCAGCCAGTCCCGGACCAGACACTGGACCGTCC...ACCTGGGTTCTCCTGTGACCTGGGGCACAGTTCTTGCCCTCTAGGCCTTGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GGGGCCAGGCTTGGAGTTGCCTCCAGGCAACTCCCAAACACCACCACAGGGATCCTCCTGCAGCTTCTGTaGCAGTGTCACCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GARLGVASRQLPNTTTGILLQLL*QCHLVQ
Trigger: CTGGACCAGGTGACACTGCCACAGAAGCTGCAGGAG...GATCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp ACAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGCGGGCCACATTGCCCATaGTGCGGTAGCGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: TTLASLPEPHEGGRARAGGPHCP*CGSGTG
Trigger: ACCTGTACCGCTACCGCACCATGGGCAATGTGGCCC...GCCAGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTGGTTTGGGGGAAGAGCCACACGGCCTaGCGGACACTGGCCATTCGT +
Preference number: 4 (lower is better)
Translates to: ELCPRSQENPGVLVLVWGKSHTA*RTLAIR
Trigger: ACGAATGGCCAGTGTCCGCCAGGCCGTGTGGCTCTT...CCCCCAAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp GGTCCCTGTAGAGAGCAGCCAGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAATAATTCTCCAACTTaGCCCCCTTGGCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GPCREQPDCHASAGGQAWNNSPT*PPWPPA
Trigger: GGCTGGCGGCCAAGGGGGTCAAGTTGGAGAATTATT...CCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGCTCTCTACAGGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp TCCTCCACAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGCTGTGGGCGGATaGTGGAATGCTGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSTTLASLPEPHEGGRARAAVGG*WNAGVL
Trigger: CAGGACTCCAGCATTCCATCATCCGCCCACAGCAGC...CCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp AGATGTGACAGGCTTCTCCCTGAGAAACAGCAGGGCCAAGCCGGAGTGGGGAAGAGTCCACATTGCCCGTaGGCGAGCCCAGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: RCDRLLPEKQQGQAGVGKSPHCP*ASPGRC
Trigger: ACACCTTCCTGGGCTCGCTCACGGGCAATGTGGACT...CTTCCCCACTCCGGCTTGGCCCTGCTGTTTCTCAGGGAGAAGCCTGTCACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp TCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCCCTGTAGATGGAGATCTCCGTGCGTGGTaGGGCCCGGCCCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: SLPCSTKGLYTLQLPVDGDLRAW*GPALAD
Trigger: ATCAGCGAGGGCCGGGCCTCACCACGCACGGAGATC...TCCATCTACAGGGAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp CACTCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACCTAAGCGCAGGCCCTaGGCCGCCTTTGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HSYPGSLPCSTKGLYTLQPKRRP*AAFAPS
Trigger: AGAGGGAGCAAAGGCGGCGCAGGGCCTGCGCTTAGG...TTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp CAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGCAGTACCGGGATGGCTGTaGGGTTATATTCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QPWPVFQSLMKEAEPGLAVPGWL*GYIRPG
Trigger: GCCTGGCCGAATATAACCGCACAGCCATCCCGGTAC...TGCCAGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GGCAAGAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTGGTTTCGGCCTGGCGGACACTaGCCATTCGTTCCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GKNCAPGHRRTQVSWYWFRPGGH*PFVPGS
Trigger: GGAACCTGGAACGAATGGCCAGTGTCCGCCAGGCCG...AAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CAA 72 bp AGATTGCCATGCTTCAGCTGGGGGCCAGGCTTGGAGTaGCCTCCAGGCAACTCCCAAACACCACCACAGGGA +
Preference number: 4 (lower is better)
Translates to: RLPCFSWGPGLE*PPGNSQTPPQG
Trigger: TCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp GGTGCTGCAGCAGTTAATGGCCCAGCCAGTTTCTCTGGGTACTGGAGGGGCCAGCCATTAAAGTCAGGATaGGCCCGGGGGTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GAAAVNGPASFSGYWRGQPLKSG*ARGFSA
Trigger: AGCTGAGAACCCCCGGGCTCATCCTGACTTTAATGG...CTGGCCCCTCCAGTACCCAGAGAAACTGGCTGGGCCATTAACTGCTGCAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp CACTCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAATTGCACCACGGTGCCTaGCACCAGTCTGACCGGAGG +
Preference number: 4 (lower is better)
Translates to: HSYPGSLPCSTKGLYTLQLHHGA*HQSDRR
Trigger: CCTCCGGTCAGACTGGTGTCAGGCACCGTGGTGCAA...TTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp CACCCTCCAACTCCCTGTAGATGGAGATGTGACAGGCTTCTCCCTGAGAAACAGTCCGCCGGGCCACATTaGCCATGGTGCGGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: HPPTPCRWRCDRLLPEKQSAGPH*PWCGSG
Trigger: ACCGCTACCGCACCATGGGCAATGTGGCCCGGCGGA...CTGTTTCTCAGGGAGAAGCCTGTCACATCTCCATCTACAGGGAGTTGGAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCCCTGTAGATGGACGGCGGTGTTCCAGATaGCAAAGCCGCCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLPCSTKGLYTLQLPVDGRRCSR*QSRPPG
Trigger: CCCTGGAGGGCGGCTTTGGCATCTGGAACACCGCCG...TCCATCTACAGGGAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TTCTCCCTGAGAAACAGCAGGGCCAAGCCGGAGTGGGGAAGATCCTCTAAAGGAACGCGGATGGCAGCCTaGACGGCGGTGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: FSLRNSRAKPEWGRSSKGTRMAA*TAVFQM
Trigger: CATCTGGAACACCGCCGTGCAGGCTGCCATCCGCGT...TCCTTTAGAGGATCTTCCCCACTCCGGCTTGGCCCTGCTGTTTCTCAGGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TCAAGGCCTAGAGGGCAAGAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCGGCCAGGCTTGGAGTTaGCTCCAGGCAACTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SRPRGQELCPRSQENPGVGQAWS*LQATPK
Trigger: TTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCC...GACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTCTTGCCCTCTAGGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GGTGCTGCAGCAGTTAATGGCCCAGCCAGTTTCTCTGGGTACTGGAGGGGCCAGTGCTGGAGTCCTGTGTaGATCTGGTACCTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GAAAVNGPASFSGYWRGQCWSPV*IWYLPV
Trigger: CACTGGCAGGTACCAGATCCACACAGGACTCCAGCA...CTGGCCCCTCCAGTACCCAGAGAAACTGGCTGGGCCATTAACTGCTGCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTGGTTTGGGGGGAAGCCGCACACGCCTaGGCCATCACAGTTGTCATA +
Preference number: 4 (lower is better)
Translates to: ELCPRSQENPGVLVLVWGEAAHA*AITVVI
Trigger: TATGACAACTGTGATGGCCCAGGCGTGTGCGGCTTC...CCCCCAAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp CACTCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAAAGCATAGTGGAGTACTaGCCGCTGAGCCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HSYPGSLPCSTKGLYTLQSIVEY*PLSPQA
Trigger: GGCCTGGGGGCTCAGCGGCCAGTACTCCACTATGCT...TTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GGCAAGAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTGGTTTTTGAGCAGGGGACTGTaGACAAAGCCTAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: GKNCAPGHRRTQVSWYWFLSRGL*TKPRPR
Trigger: GCGGGGCCTAGGCTTTGTCCACAGTCCCCTGCTCAA...AAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp TTCTCCCTGAGAAACAGCAGGGCCAAGCCGGAGTGGGGAAGATCCTCTAAAGGAGCTGGGGGCCAGGCTTaGAGTTGCCTCCAGGCAACT +
Preference number: 4 (lower is better)
Translates to: FSLRNSRAKPEWGRSSKGAGGQA*SCLQAT
Trigger: AGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCAGC...TCCTTTAGAGGATCTTCCCCACTCCGGCTTGGCCCTGCTGTTTCTCAGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp TCAAGGCCTAGAGGGCAAGAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCTTGCCATGCTTCAGCTaGGGGCCAGGCTTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SRPRGQELCPRSQENPGVLPCFS*GPGLEL
Trigger: CAACTCCAAGCCTGGCCCCCAGCTGAAGCATGGCAA...GACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTCTTGCCCTCTAGGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp TGGCCCCAGGCTCCAGGGCCACACCAAAGAGTCACAAAGTCATTAGAGCTCATTTGGAGTACTGGCCGCTaGGCCCCCAGGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: WPQAPGPHQRVTKSLELIWSTGR*APRPHS
Trigger: AGAATGTGGCCTGGGGGCTCAGCGGCCAGTACTCCA...AATGAGCTCTAATGACTTTGTGACTCTTTGGTGTGGCCCTGGAGCCTGGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp AAATCAAGGCCTAGAGGGCAAGAACTGTGCCCCAGGTCACAGGAGAACCCAGGTTCGGGTACCAGTCAGTaGTGTGCATCAGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: KSRPRGQELCPRSQENPGSGTSQ*CASVPG
Trigger: GCCGGGCACTGATGCACATCACTGACTGGTACCCGA...ACCTGGGTTCTCCTGTGACCTGGGGCACAGTTCTTGCCCTCTAGGCCTTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp TCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCGTGAGGAGGCAGGACTaGGACACAGGCATCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SYPGSLPCSTKGLYTLQLVRRQD*DTGIPV
Trigger: GACTGGGATGCCTGTGTCTCAGTCCTGCCTCCTCAC...GAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TCCTCCACAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGGGCGGATGATGGAATaGTGGAGTCCTGTGTGGATC +
Preference number: 4 (lower is better)
Translates to: SSTTLASLPEPHEGGRARGRMME*WSPVWI
Trigger: GATCCACACAGGACTCCAGCATTCCATCATCCGCCC...CCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGTGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp GAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTGGTTTGGGGGATGGGTGGAATAACCTaGCTCCTGCAGCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ELCPRSQENPGVLVLVWGMGGIT*LLQLLW
Trigger: CCACAGAAGCTGCAGGAGGCAGGTTATTCCACCCAT...CCCCCAAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp ACCCACTCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCTACTCACGAGGGGACTaGAGGGGTGTGTGTACTGCC +
Preference number: 4 (lower is better)
Translates to: THSYPGSLPCSTKGLYTLYSRGD*RGVCTA
Trigger: GGCAGTACACACACCCCTGCAGTCCCCTCGTGAGTA...GAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGAGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TTCTCCCTGAGAAACAGCAGGGCCAAGCCGGAGTGGGGAAGATCCTCTAAAGGAGCCCGGCTTGTCCGTTaGTTTCGCTTGAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: FSLRNSRAKPEWGRSSKGARLVR*FRLSRG
Trigger: TCCCCTGCTCAAGCGAAAGCAACGGACAAGCCGGGC...TCCTTTAGAGGATCTTCCCCACTCCGGCTTGGCCCTGCTGTTTCTCAGGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCCCTGTAGATGGAGCAGCCAGATTGCCATaGTTCAGCTGGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SLPCSTKGLYTLQLPVDGAARLP*FSWGPG
Trigger: GCCTGGCCCCCAGCTGAAGCATGGCAATCTGGCTGC...TCCATCTACAGGGAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp TTCTCCCTGAGAAACAGCAGGGCCAAGCCGGAGTGGGGAAGATCCTCTAAAGGAAGGATGAAGATGATGTaGGGAGGCTGGGGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: FSLRNSRAKPEWGRSSKGRMKMM*GGWGGA
Trigger: CGCTCCGCCCCAGCCTCCCCACATCATCTTCATCCT...TCCTTTAGAGGATCTTCCCCACTCCGGCTTGGCCCTGCTGTTTCTCAGGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GGTGCTGCAGCAGTTAATGGCCCAGCCAGTTTCTCTGGGTACTGGAGGGGCCAGCGGATGATGGAATGCTaGAGTCCTGTGTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: GAAAVNGPASFSGYWRGQRMMEC*SPVWIW
Trigger: CCAGATCCACACAGGACTCCAGCATTCCATCATCCG...CTGGCCCCTCCAGTACCCAGAGAAACTGGCTGGGCCATTAACTGCTGCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp CACCCACTCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTTGGCCAGGATATGGCTaGCGCGCTGGGCATAAAGCA +
Preference number: 4 (lower is better)
Translates to: HPLLSRLPTLFNQGTLHPWPGYG*RAGHKA
Trigger: TGCTTTATGCCCAGCGCGCCAGCCATATCCTGGCCA...AGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGAGTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp ACAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGCGTCCTGGTACTGGTTTaGGGGCTCTTCACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TTLASLPEPHEGGRARAGVLVLV*GLFTAL
Trigger: AAGAGCTGTGAAGAGCCCCCAAACCAGTACCAGGAC...GCCAGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp AGATGTGACAGGCTTCTCCCTGAGAAACAGCAGGGCCAAGCCGGAGTGGGGAAGCAGGTGTCCTGGTACTaGTTTGGGGGCTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: RCDRLLPEKQQGQAGVGKQVSWY*FGGSSQ
Trigger: CTGTGAAGAGCCCCCAAACCAGTACCAGGACACCTG...CTTCCCCACTCCGGCTTGGCCCTGCTGTTTCTCAGGGAGAAGCCTGTCACATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp CCACCGTGGCCCCAGGCTCCAGGGCCACACCAAAGAGTCACAAAGTCATTAGAGAGAACCCAGGTGTCCTaGTACTGGTTTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PPWPQAPGPHQRVTKSLERTQVS*YWFGGS
Trigger: AGAGCCCCCAAACCAGTACCAGGACACCTGGGTTCT...CTCTAATGACTTTGTGACTCTTTGGTGTGGCCCTGGAGCCTGGGGCCACGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CAA 72 bp CAGGGATCCCGTGTTAAGGGGGAAGCCTTAAAGGAGTaGTCAAGTGGCAAGGCCGGCCAGGAACTCCACCGT +
Preference number: 4 (lower is better)
Translates to: QGSRVKGEALKE*SSGKAGQELHR
Trigger: ACGGTGGAGTTCCTGGCCGGCCTTGCCACTTGACAACTCCTTTAAGGCTTCCCCCTTAACACGGGATCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp TTCTCCCTGAGAAACAGCAGGGCCAAGCCGGAGTGGGGAAGATCCTCTAAAGGACTCATGTGGGTCACCTaGGGTCACAGAGCAAGTCCG +
Preference number: 4 (lower is better)
Translates to: FSLRNSRAKPEWGRSSKGLMWVT*GHRASP
Trigger: CGGACTTGCTCTGTGACCTCAGGTGACCCACATGAG...TCCTTTAGAGGATCTTCCCCACTCCGGCTTGGCCCTGCTGTTTCTCAGGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCGGCTCCGCGAAGGCGTaGAGATGGGCTGGATGTAAT +
Preference number: 4 (lower is better)
Translates to: SYPGSLPCSTKGLYTLQLGSAKA*RWAGCN
Trigger: ATTACATCCAGCCCATCTGCACGCCTTCGCGGAGCC...GAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCACATTCTCACCCTCGTaGAGGTCGAAGCCGCACACG +
Preference number: 4 (lower is better)
Translates to: SYPGSLPCSTKGLYTLQLTFSPS*RSKPHT
Trigger: CGTGTGCGGCTTCGACCTGCACGAGGGTGAGAATGT...GAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp AAATCAAGGCCTAGAGGGCAAGAACTGTGCCCCAGGTCACAGGAGAACCCAGGTCACCTTCCCAATAAGTaGCCTTGCGTCCTCGGAGCG +
Preference number: 4 (lower is better)
Translates to: KSRPRGQELCPRSQENPGHLPNK*PCVLGA
Trigger: CGCTCCGAGGACGCAAGGGCACTTATTGGGAAGGTG...ACCTGGGTTCTCCTGTGACCTGGGGCACAGTTCTTGCCCTCTAGGCCTTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp CCACCGTGGCCCCAGGCTCCAGGGCCACACCAAAGAGTCACAAAGTCATTAGAGCCAGAAGAGGAATTTTaGACCACGGTGCCTGACACC +
Preference number: 4 (lower is better)
Translates to: PPWPQAPGPHQRVTKSLEPEEEF*TTVPDT
Trigger: GGTGTCAGGCACCGTGGTGCAAAATTCCTCTTCTGG...CTCTAATGACTTTGTGACTCTTTGGTGTGGCCCTGGAGCCTGGGGCCACGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp CACTCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAAGCAGTTGGGCTGCTGTaGGCGGATGATGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: HSYPGSLPCSTKGLYTLQAVGLL*ADDGML
Trigger: CAGCATTCCATCATCCGCCCACAGCAGCCCAACTGC...TTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp TGGCCCCAGGCTCCAGGGCCACACCAAAGAGTCACAAAGTCATTAGAGCTCATTGGCCAGTGTCTGCGGTaGGATCCAATCGCCATAGCC +
Preference number: 4 (lower is better)
Translates to: WPQAPGPHQRVTKSLELIGQCLR*DPIAIA
Trigger: GGCTATGGCGATTGGATCCCACCGCAGACACTGGCC...AATGAGCTCTAATGACTTTGTGACTCTTTGGTGTGGCCCTGGAGCCTGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp ACAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGCCACCATCAGATCCGTTaGGACATTAGCCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TTLASLPEPHEGGRARAGHHQIR*DISLVL
Trigger: CAACACCAGGCTAATGTCCCAACGGATCTGATGGTG...GCCAGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp ACCCACTCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCAGGGCCAAGCCGGAGTaGGGAAGATCCTCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: THSYPGSLPCSTKGLYTLRAKPE*GRSSKG
Trigger: TCCTTTAGAGGATCTTCCCCACTCCGGCTTGGCCCT...GAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGAGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp CACTCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAATCCGTTGCTTTCGCTTaGGCAGGGGACTGTGGACAA +
Preference number: 4 (lower is better)
Translates to: HSYPGSLPCSTKGLYTLQSVAFA*AGDCGQ
Trigger: TTGTCCACAGTCCCCTGCTCAAGCGAAAGCAACGGA...TTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp AAATCAAGGCCTAGAGGGCAAGAACTGTGCCCCAGGTCACAGGAGAACCCAGGTAATTTCTCTCTCCTCTaGTTTCCCGGCCTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: KSRPRGQELCPRSQENPGNFSLL*FPGLSP
Trigger: GGGCGAGAGGCCGGGAAAGCAGAGGAGAGAGAAATT...ACCTGGGTTCTCCTGTGACCTGGGGCACAGTTCTTGCCCTCTAGGCCTTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp AGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCCCTGTAGACCACATTGCCCATGGTaGGGTAGCGGTACAGGTACT +
Preference number: 4 (lower is better)
Translates to: RLPTLFNQGTLHPPTPCRPHCPW*GSGTGT
Trigger: AGTACCTGTACCGCTACCGCACCATGGGCAATGTGG...TCTACAGGGAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp CCATGTTACGACACTTTAATCAAGTTCACAAGCTCCTCCACAACCTTGGCCAGTGGCGAGCCAGCAGGGTaGGGACCACATCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PCYDTLIKFTSSSTTLASGEPAG*GPHQAA
Trigger: AGCGGCCTGATGTGGTCCGCACCCTGCTGGCTCGCC...ACTGGCCAAGGTTGTGGAGGAGCTTGTGAACTTGATTAAAGTGTCGTAACATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp CACCCTCCAACTCCCTGTAGATGGAGATGTGACAGGCTTCTCCCTGAGAAACAGAGAGAGCAGCCAGATTaGCATGCTTCAGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: HPPTPCRWRCDRLLPEKQREQPD*HASAGG
Trigger: GCCCCCAGCTGAAGCATGGCAATCTGGCTGCTCTCT...CTGTTTCTCAGGGAGAAGCCTGTCACATCTCCATCTACAGGGAGTTGGAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp GAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTGGTTTGGGGGGCGAAGGCGTGCAGATaGGCTGGATGTAATAATTCT +
Preference number: 4 (lower is better)
Translates to: ELCPRSQENPGVLVLVWGAKACR*AGCNNS
Trigger: AGAATTATTACATCCAGCCCATCTGCACGCCTTCGC...CCCCCAAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp TTCTCCCTGAGAAACAGCAGGGCCAAGCCGGAGTGGGGAAGATCCTCTAAAGGAAGTCCTGTGTGGATCTaGTACCTGCCAGTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: FSLRNSRAKPEWGRSSKGSPVWI*YLPVRS
Trigger: GCTCCTCACTGGCAGGTACCAGATCCACACAGGACT...TCCTTTAGAGGATCTTCCCCACTCCGGCTTGGCCCTGCTGTTTCTCAGGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp AGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCCCTGTAGAGGTAGCGTACCGGGATaGCTGTGCGGTTATATTCGG +
Preference number: 4 (lower is better)
Translates to: RLPTLFNQGTLHPPTPCRGSVPG*LCGYIR
Trigger: CCGAATATAACCGCACAGCCATCCCGGTACGCTACC...TCTACAGGGAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TCCTCCACAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCAGCTTCCAAAAAGTaGTCTCTACCATCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SSTTLASLPEPHEGGRARAASKK*SLPSSD
Trigger: GTCAGAGGATGGTAGAGAGCACTTTTTGGAAGCTGC...CCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TTTCTACCACCCTTGGTGCTGCAGCAGTTAATGGCCCAGCCAGTTTCTCTGGGTCAGGGGTGTGTGTACTaGCTGGAAGGCCACATAGAG +
Preference number: 4 (lower is better)
Translates to: FLPPLVLQQLMAQPVSLGQGCVY*LEGHIE
Trigger: CTCTATGTGGCCTTCCAGGCAGTACACACACCCCTG...ACCCAGAGAAACTGGCTGGGCCATTAACTGCTGCAGCACCAAGGGTGGTAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp CACTCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAAAGTGATGTGCATCAGTaGCCGGCTTGTCCGTTGCTT +
Preference number: 4 (lower is better)
Translates to: HSYPGSLPCSTKGLYTLQSDVHQ*PACPLL
Trigger: AAGCAACGGACAAGCCGGGCACTGATGCACATCACT...TTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp AGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCCCTGTAGAAGTGGGTCAATGTTGTaGAGGATCTCCGTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: RLPTLFNQGTLHPPTPCRSGSML*RISVRG
Trigger: ACCACGCACGGAGATCCTGCACAACATTGACCCACT...TCTACAGGGAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp AGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCCCTGTAGAAAAGGAGTTGTCAAGTaGCAAGGCCGGCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: RLPTLFNQGTLHPPTPCRKGVVK*QGRPGT
Trigger: AGTTCCTGGCCGGCCTTGCCACTTGACAACTCCTTT...TCTACAGGGAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp TCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCCCTGTAGATGGATACCAGTCAGTGATGTaGATCAGTGCCCGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SLPCSTKGLYTLQLPVDGYQSVM*ISARLV
Trigger: GACAAGCCGGGCACTGATGCACATCACTGACTGGTA...TCCATCTACAGGGAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp CACTCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACCAACTCCCTGTAGATaGAGATGTGACAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HSYPGSLPCSTKGLYTLQPTPCR*RCDRLL
Trigger: GAGAAGCCTGTCACATCTCCATCTACAGGGAGTTGG...TTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp TGGCCCCAGGCTCCAGGGCCACACCAAAGAGTCACAAAGTCATTAGAGCTCATTACAGGCATCCCAGTCTaGTTTATTCCCACCCACTCC +
Preference number: 4 (lower is better)
Translates to: WPQAPGPHQRVTKSLELITGIPV*FIPTHS
Trigger: GGAGTGGGTGGGAATAAACCAGACTGGGATGCCTGT...AATGAGCTCTAATGACTTTGTGACTCTTTGGTGTGGCCCTGGAGCCTGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp CCATGTTACGACACTTTAATCAAGTTCACAAGCTCCTCCACAACCTTGGCCAGTCATCGGCTGCTGAGGTaGTACCACCTGCCAGACCCA +
Preference number: 4 (lower is better)
Translates to: PCYDTLIKFTSSSTTLASHRLLR*YHLPDP
Trigger: TGGGTCTGGCAGGTGGTACCACCTCAGCAGCCGATG...ACTGGCCAAGGTTGTGGAGGAGCTTGTGAACTTGATTAAAGTGTCGTAACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR GCA 90 bp CCATGTTACGACACTTTAATCAAGTTCACAAGCTCCTCCACAACCTTGGCCAGTAAGGTGGCCAGTGTCTaGGGTGGGATCCAATCGCCA +
Preference number: 4 (lower is better)
Translates to: PCYDTLIKFTSSSTTLASKVASV*GGIQSP
Trigger: TGGCGATTGGATCCCACCGCAGACACTGGCCACCTT...ACTGGCCAAGGTTGTGGAGGAGCTTGTGAACTTGATTAAAGTGTCGTAACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR TCA 90 bp AGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAACTCCCTGTAGAACATTAGCCTGGTGTTaGGTTTACGGAAAAAGGATC +
Preference number: 4 (lower is better)
Translates to: RLPTLFNQGTLHPPTPCRTLAWC*VYGKRI
Trigger: GATCCTTTTTCCGTAAACTCAACACCAGGCTAATGT...TCTACAGGGAGTTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
3UTR CAA 72 bp GACACTTTAATCAAGTTCACAAGCTCCTCCACAACCTaGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: DTLIKFTSSSTT*ASLPEPHEGGR
Trigger: TCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGTGGAGGAGCTTGTGAACTTGATTAAAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CCA 90 bp CCATGTTACGACACTTTAATCAAGTTCACAAGCTCCTCCACAACCTTGGCCAGTGGCATGGTTGTAGAGTaGGTCAATGTTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: PCYDTLIKFTSSSTTLASGMVVE*VNVVQD
Trigger: ATCCTGCACAACATTGACCCACTCTACAACCATGCC...ACTGGCCAAGGTTGTGGAGGAGCTTGTGAACTTGATTAAAGTGTCGTAACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS GCA 90 bp TCGGCCGCAGCGGGGCGCTCTGGGGAGGTCAGGCCCGCGCCGAGCTaGCTCCCGCTGCCTAAGCGCAGGCCCTGCGCCGCCTTTGCTCCC +
Preference number: 5 (lower is better)
Translates to: SAAAGRSGEVRPAPS*LPLPKRRPCAAFAP
Trigger: GGGAGCAAAGGCGGCGCAGGGCCTGCGCTTAGGCAGCGGGAGGCAGCTCGGCGCGGGCCTGACCTCCCCAGAGCGCCCCGCTGCGGCCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS GCA 90 bp GTCAGGCCCGCGCCGAGCTGCCTCCCGCTGCCTAAGCGCAGGCCCTaGGCCGCCTTTGCTCCCTCTTCCCCAGCTCAGCCCGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: VRPAPSCLPLPKRRP*AAFAPSSPAQPGQP
Trigger: AGGCTGGCCGGGCTGAGCTGGGGAAGAGGGAGCAAAGGCGGCGCAGGGCCTGCGCTTAGGCAGCGGGAGGCAGCTCGGCGCGGGCCTGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS GCA 90 bp CCGGGATGGCTGTGCGGTTATATTCGGCCAGGCGAGCCAGCAGGGTaGGGACCACATCAGGCCGCTGGCCAGCCAGGTCCTCCCGTTCAT +
Preference number: 5 (lower is better)
Translates to: PGWLCGYIRPGEPAG*GPHQAAGQPGPPVH
Trigger: ATGAACGGGAGGACCTGGCTGGCCAGCGGCCTGATGTGGTCCGCACCCTGCTGGCTCGCCTGGCCGAATATAACCGCACAGCCATCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS TCA 90 bp CAATGTTGTGCAGGATCTCCGTGCGTGGTGAGGCCCGGCCCTCGCTaGTGGCCGGCCACACGTCGTAGCCATCTAGCCCATCGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QCCAGSPCVVRPGPR*WPATRRSHLAHRLL
Trigger: CAGCAGCCGATGGGCTAGATGGCTACGACGTGTGGCCGGCCATCAGCGAGGGCCGGGCCTCACCACGCACGGAGATCCTGCACAACATTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS CCA 90 bp TGCAGGTCACCATGGCCGCGTACTTCCGCCGGGCCACATTGCCCATaGTGCGGTAGCGGTACAGGTACTCACGAGGGGACTGCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: CRSPWPRTSAGPHCP*CGSGTGTHEGTAGV
Trigger: CACCCCTGCAGTCCCCTCGTGAGTACCTGTACCGCTACCGCACCATGGGCAATGTGGCCCGGCGGAAGTACGCGGCCATGGTGACCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS GCA 90 bp AGGTCACCATGGCCGCGTACTTCCGCCGGGCCACATTGCCCATGGTaGGGTAGCGGTACAGGTACTCACGAGGGGACTGCAGGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: RSPWPRTSAGPHCPW*GSGTGTHEGTAGVC
Trigger: ACACACCCCTGCAGTCCCCTCGTGAGTACCTGTACCGCTACCGCACCATGGGCAATGTGGCCCGGCGGAAGTACGCGGCCATGGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS GCA 90 bp TCCACTCACCCACGCGGATGGCAGCCTGCACGGCGGTGTTCCAGATaGCAAAGCCGCCCTCCAGGGAGCCATGCTGGGCATGGTTGTAGA +
Preference number: 5 (lower is better)
Translates to: STHPRGWQPARRCSR*QSRPPGSHAGHGCR
Trigger: TCTACAACCATGCCCAGCATGGCTCCCTGGAGGGCGGCTTTGGCATCTGGAACACCGCCGTGCAGGCTGCCATCCGCGTGGGTGAGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS GCA 90 bp GATGAGCCCGGGGGTTCTCAGCTGGGTAGCGTACCGGGATGGCTGTaGGGTTATATTCGGCCAGGCGAGCCAGCAGGGTGCGGACCACAT +
Preference number: 5 (lower is better)
Translates to: DEPGGSQLGSVPGWL*GYIRPGEPAGCGPH
Trigger: ATGTGGTCCGCACCCTGCTGGCTCGCCTGGCCGAATATAACCGCACAGCCATCCCGGTACGCTACCCAGCTGAGAACCCCCGGGCTCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS CCA 90 bp AGTCAGGATGAGCCCGGGGGTTCTCAGCTGGGTAGCGTACCGGGATaGCTGTGCGGTTATATTCGGCCAGGCGAGCCAGCAGGGTGCGGA +
Preference number: 5 (lower is better)
Translates to: SQDEPGGSQLGSVPG*LCGYIRPGEPAGCG
Trigger: TCCGCACCCTGCTGGCTCGCCTGGCCGAATATAACCGCACAGCCATCCCGGTACGCTACCCAGCTGAGAACCCCCGGGCTCATCCTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS TCA 90 bp GACCCCCTTGGCCGCCAGCCTGTCCAGCGTAGGGGTCTCGATATCTaGACCATGGTAGCCCACGTCGTGGTAGCCTTGGTCGTCCGTGAG +
Preference number: 5 (lower is better)
Translates to: DPLGRQPVQRRGLDI*TMVAHVVVALVVRE
Trigger: CTCACGGACGACCAAGGCTACCACGACGTGGGCTACCATGGTTCAGATATCGAGACCCCTACGCTGGACAGGCTGGCGGCCAAGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS GCA 90 bp CATCCATGCAGGTCACCATGGCCGCGTACTTCCGCCGGGCCACATTaGCCATGGTGCGGTAGCGGTACAGGTACTCACGAGGGGACTGCA +
Preference number: 5 (lower is better)
Translates to: HPCRSPWPRTSAGPH*PWCGSGTGTHEGTA
Trigger: TGCAGTCCCCTCGTGAGTACCTGTACCGCTACCGCACCATGGGCAATGTGGCCCGGCGGAAGTACGCGGCCATGGTGACCTGCATGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS CCA 90 bp GGACACTGGCCATTCGTTCCAGGTTCCACCAGCTACCCGGGAAGGTaGCCAGTGTCTGCGGTGGGATCCAATCGCCATAGCCGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: GHWPFVPGSTSYPGR*PVSAVGSNRHSRGL
Trigger: GAGACCCCGGCTATGGCGATTGGATCCCACCGCAGACACTGGCCACCTTCCCGGGTAGCTGGTGGAACCTGGAACGAATGGCCAGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS-3UTR CAA 90 bp TCCTCCACAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGGAGGGAGGCACAAGTaGGGCGGGTCGAGGGGACAC +
Preference number: 5 (lower is better)
Translates to: SSTTLASLPEPHEGGRARGGRHK*GGSRGH
Trigger: GTGTCCCCTCGACCCGCCCAACTTGTGCCTCCCTCC...CCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGTGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CAA 90 bp AGATGTGACAGGCTTCTCCCTGAGAAACAGCAGGGCCAAGCCGGAGTGGGGAAGGCCACGAAGCTCGGCTaGGCCCAGTCCCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: RCDRLLPEKQQGQAGVGKATKLG*AQSQDR
Trigger: CCTGTCCTGGGACTGGGCCAAGCCGAGCTTCGTGGC...CTTCCCCACTCCGGCTTGGCCCTGCTGTTTCTCAGGGAGAAGCCTGTCACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CAA 90 bp GAACTGTGCCCCAGGTCACAGGAGAACCCAGGTGTCCTGGTACTGGTTTGGGGGTCCAACTTGACCCCCTaGGCCGCCAGCCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: ELCPRSQENPGVLVLVWGSNLTP*AASLSS
Trigger: GCTGGACAGGCTGGCGGCCAAGGGGGTCAAGTTGGA...CCCCCAAACCAGTACCAGGACACCTGGGTTCTCCTGTGACCTGGGGCACAGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CAA 90 bp GGGGCCAGGCTTGGAGTTGCCTCCAGGCAACTCCCAAACACCACCACAGGGATCGGGCCAGGCTTGGAGTaGCCTCCAGGCAACTCCCAA +
Preference number: 5 (lower is better)
Translates to: GARLGVASRQLPNTTTGIGPGLE*PPGNSQ
Trigger: TTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCC...GATCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CAA 90 bp CAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGCACTCCACCCACAGCGCTaGGGGGTCCCTGTAGAGAGC +
Preference number: 5 (lower is better)
Translates to: QPWPVFQSLMKEAEPGLALHPQR*GVPVES
Trigger: GCTCTCTACAGGGACCCCCAAGCGCTGTGGGTGGAG...TGCCAGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS TCA 90 bp ATGGTTGTAGAGTGGGTCAATGTTGTGCAGGATCTCCGTGCGTGGTaGGGCCCGGCCCTCGCTGATGGCCGGCCACACGTCGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: MVVEWVNVVQDLRAW*GPALADGRPHVVAI
Trigger: GATGGCTACGACGTGTGGCCGGCCATCAGCGAGGGCCGGGCCTCACCACGCACGGAGATCCTGCACAACATTGACCCACTCTACAACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS GCA 90 bp TGGTCCAGGGGCAGGCAGTTGGGCTGCTGTGGGCGGATGATGGAATaGTGGAGTCCTGTGTGGATCTGGTACCTGCCAGTGAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: WSRGRQLGCCGRMME*WSPVWIWYLPVRSW
Trigger: CCAGCTCCTCACTGGCAGGTACCAGATCCACACAGGACTCCAGCATTCCATCATCCGCCCACAGCAGCCCAACTGCCTGCCCCTGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS CCA 90 bp TCCAGGGGCAGGCAGTTGGGCTGCTGTGGGCGGATGATGGAATGCTaGAGTCCTGTGTGGATCTGGTACCTGCCAGTGAGGAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SRGRQLGCCGRMMEC*SPVWIWYLPVRSWL
Trigger: GAGCCAGCTCCTCACTGGCAGGTACCAGATCCACACAGGACTCCAGCATTCCATCATCCGCCCACAGCAGCCCAACTGCCTGCCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CAA 90 bp ACAACCTTGGCCAGTCTTCCAGAGCCTCATGAAGGAGGCAGAGCCAGGGCTGGCTGCCCGGCTTGTCCGTaGCTTTCGCTTGAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: TTLASLPEPHEGGRARAGCPACP*LSLEQG
Trigger: CCCCTGCTCAAGCGAAAGCAACGGACAAGCCGGGCA...GCCAGCCCTGGCTCTGCCTCCTTCATGAGGCTCTGGAAGACTGGCCAAGGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CAA 90 bp TGGGGGCCAGGCTTGGAGTTGCCTCCAGGCAACTCCCAAACACCACCACAGGGAGGGTCAGCACTGATGTaGAAGAGCCACACGGCCTGG +
Preference number: 5 (lower is better)
Translates to: WGPGLELPPGNSQTPPQGGSALM*KSHTAW
Trigger: CCAGGCCGTGTGGCTCTTCAACATCAGTGCTGACCC...TCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CAA 90 bp TGGGGGCCAGGCTTGGAGTTGCCTCCAGGCAACTCCCAAACACCACCACAGGGAGGCTGGCATCCCCACTaGCAGGTGGGGAAATCAAGG +
Preference number: 5 (lower is better)
Translates to: WGPGLELPPGNSQTPPQGGWHPH*QVGKSR
Trigger: CCTTGATTTCCCCACCTGCAAGTGGGGATGCCAGCC...TCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS GCA 90 bp GTACCACCTGCCAGACCCACCAGGGTCGGGTACCAGTCAGTGATGTaGATCAGTGCCCGGCTTGTCCGTTGCTTTCGCTTGAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: VPPARPTRVGYQSVM*ISARLVRCFRLSRG
Trigger: TCCCCTGCTCAAGCGAAAGCAACGGACAAGCCGGGCACTGATGCACATCACTGACTGGTACCCGACCCTGGTGGGTCTGGCAGGTGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS CCA 90 bp CTGTGGCAGTGTCACCTGGTCCAGGGGCAGGCAGTTGGGCTGCTGTaGGCGGATGATGGAATGCTGGAGTCCTGTGTGGATCTGGTACCT +
Preference number: 5 (lower is better)
Translates to: LWQCHLVQGQAVGLL*ADDGMLESCVDLVP
Trigger: AGGTACCAGATCCACACAGGACTCCAGCATTCCATCATCCGCCCACAGCAGCCCAACTGCCTGCCCCTGGACCAGGTGACACTGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328668.8
ENST00000509146.1
ENST00000515301.2
CDS CCA 90 bp CCAAGCACCCCCATTAAAGTCAGGATGAGCCCGGGGGTTCTCAGCTaGGTAGCGTACCGGGATGGCTGTGCGGTTATATTCGGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: PSTPIKVRMSPGVLS*VAYRDGCAVIFGQA
Trigger: CGCCTGGCCGAATATAACCGCACAGCCATCCCGGTACGCTACCCAGCTGAGAACCCCCGGGCTCATCCTGACTTTAATGGGGGTGCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS-3UTR CAA 90 bp GGGGCCAGGCTTGGAGTTGCCTCCAGGCAACTCCCAAACACCACCACAGGGATCCACGTCGTGGTAGCCTaGGTCGTCCGTGAGGATGAA +
Preference number: 5 (lower is better)
Translates to: GARLGVASRQLPNTTTGIHVVVA*VVREDE
Trigger: TTCATCCTCACGGACGACCAAGGCTACCACGACGTG...GATCCCTGTGGTGGTGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CAA 90 bp GGTGCTGCAGCAGTTAATGGCCCAGCCAGTTTCTCTGGGTACTGGAGGGGCCAGAGGGCCCAGGTGATGTaGCGCACAGCCTCATCCATG +
Preference number: 5 (lower is better)
Translates to: GAAAVNGPASFSGYWRGQRAQVM*RTASSM
Trigger: CATGGATGAGGCTGTGCGCAACATCACCTGGGCCCT...CTGGCCCCTCCAGTACCCAGAGAAACTGGCTGGGCCATTAACTGCTGCAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS TCA 90 bp CTGGGCCATCACAGTTGTCATAGGTGTAATAGTCCACATTGCCCGTaGGCGAGCCCAGGAAGGTGTCGAAGCCCCGACGGGTGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: LGHHSCHRCNSPHCP*ASPGRCRSPDGWAD
Trigger: GTCTGCCCACCCGTCGGGGCTTCGACACCTTCCTGGGCTCGCTCACGGGCAATGTGGACTATTACACCTATGACAACTGTGATGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328668.8
ENST00000509146.1
ENST00000515301.2
CDS TCA 90 bp GTGTCACCTGGTCCAGGGGCAGGCAGTTGGGCTGCTGTGGGCGGATaGTGGAATGCTGGAGTCCTGTGTGGATCTGGTACCTTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: VSPGPGAGSWAAVGG*WNAGVLCGSGTFPE
Trigger: TTCTGGAAAGGTACCAGATCCACACAGGACTCCAGCATTCCATCATCCGCCCACAGCAGCCCAACTGCCTGCCCCTGGACCAGGTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515301.2
CDS-3UTR CAA 90 bp CCATGCTTCAGCTGGGGGCCAGGCTTGGAGTTGCCTCCAGGCAACTCCCAAACATGTCCTGGTACTGGTTaGGGGGCTCTTCACAGCTCT +
Preference number: 5 (lower is better)
Translates to: PCFSWGPGLELPPGNSQTCPGTG*GALHSS
Trigger: AGAGCTGTGAAGAGCCCCCAAACCAGTACCAGGACA...TGTTTGGGAGTTGCCTGGAGGCAACTCCAAGCCTGGCCCCCAGCTGAAGCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS GCA 90 bp TGGTCCAGGGGCAGGCAGTTGGGCTGCTGTGGGCGGATGATGGAATaGTGGAGTCCTGTGTGGATCTGGTACCTTCTGAGGAATATGCAC +
Preference number: 5 (lower is better)
Translates to: WSRGRQLGCCGRMME*WSPVWIWYLLRNMH
Trigger: GTGCATATTCCTCAGAAGGTACCAGATCCACACAGGACTCCAGCATTCCATCATCCGCCCACAGCAGCCCAACTGCCTGCCCCTGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509146.1
CDS CCA 90 bp CCAGGCCACATTCTCACCCTCGTGCAGGTCGAAGCCGCACACGCCTaGGCCATCACAGTTGTCATAGGTGTAATAGTCCACATTGCCCGT +
Preference number: 5 (lower is better)
Translates to: PGHILTLVQVEAAHA*AITVVIGVIVHIAR
Trigger: ACGGGCAATGTGGACTATTACACCTATGACAACTGTGATGGCCCAGGCGTGTGCGGCTTCGACCTGCACGAGGGTGAGAATGTGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328668.8
ENST00000509146.1
ENST00000515301.2
CDS CCA 90 bp TCCAGGGGCAGGCAGTTGGGCTGCTGTGGGCGGATGATGGAATGCTaGAGTCCTGTGTGGATCTGGTACCTTCTGAGGAATATGCACCTG +
Preference number: 5 (lower is better)
Translates to: SRGRQLGCCGRMMEC*SPVWIWYLLRNMHL
Trigger: CAGGTGCATATTCCTCAGAAGGTACCAGATCCACACAGGACTCCAGCATTCCATCATCCGCCCACAGCAGCCCAACTGCCTGCCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509146.1
CDS-3UTR CAA 90 bp CACTCCTATCCAGGCTCCCTACCCTGTTCAACCAAGGGACTCTACACCCTCCAAGTCCGTTGCTTTCGCTaGAGCAGGGGACTGTGGACA +
Preference number: 5 (lower is better)
Translates to: HSYPGSLPCSTKGLYTLQVRCFR*SRGLWT
Trigger: TGTCCACAGTCCCCTGCTCAAGCGAAAGCAACGGAC...TTGGAGGGTGTAGAGTCCCTTGGTTGAACAGGGTAGGGAGCCTGGATAGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS CCA 90 bp GATGTGACAGGCTTCTCCCTGAGAAACAGCAGGGCCAAGCCGGAGTaGGGAAGATCCTCTAAAGGACAGTTTTCTCCCTCCCCACCATCA +
Preference number: 5 (lower is better)
Translates to: DVTGFSLRNSRAKPE*GRSSKGQFSPSPPS
Trigger: TGATGGTGGGGAGGGAGAAAACTGTCCTTTAGAGGATCTTCCCCACTCCGGCTTGGCCCTGCTGTTTCTCAGGGAGAAGCCTGTCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CAA 90 bp TTTCTACCACCCTTGGTGCTGCAGCAGTTAATGGCCCAGCCAGTTTCTCTGGGTAGCTCCTCCACAACCTaGGCCAGTCTTCCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: FLPPLVLQQLMAQPVSLGSSSTT*ASLPEP
Trigger: AGGCTCTGGAAGACTGGCCAAGGTTGTGGAGGAGCT...ACCCAGAGAAACTGGCTGGGCCATTAACTGCTGCAGCACCAAGGGTGGTAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CAA 90 bp AGATGTGACAGGCTTCTCCCTGAGAAACAGCAGGGCCAAGCCGGAGTGGGGAAGAAAGTCTGGCCACCATaGTCACTGGAGAAGATGATG +
Preference number: 5 (lower is better)
Translates to: RCDRLLPEKQQGQAGVGKKVWPP*SLEKMM
Trigger: CATCATCTTCTCCAGTGACAATGGTGGCCAGACTTT...CTTCCCCACTCCGGCTTGGCCCTGCTGTTTCTCAGGGAGAAGCCTGTCACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CAA 90 bp AAATCAAGGCCTAGAGGGCAAGAACTGTGCCCCAGGTCACAGGAGAACCCAGGTCTCTTTCTACCACCCTaGGTGCTGCAGCAGTTAATG +
Preference number: 5 (lower is better)
Translates to: KSRPRGQELCPRSQENPGLFLPP*VLQQLM
Trigger: CATTAACTGCTGCAGCACCAAGGGTGGTAGAAAGAG...ACCTGGGTTCTCCTGTGACCTGGGGCACAGTTCTTGCCCTCTAGGCCTTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS-3UTR CAA 90 bp CCATGTTACGACACTTTAATCAAGTTCACAAGCTCCTCCACAACCTTGGCCAGTGAAGCCTTAAAGGAGTaGTCAAGTGGCAAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: PCYDTLIKFTSSSTTLASEALKE*SSGKAG
Trigger: GCCGGCCTTGCCACTTGACAACTCCTTTAAGGCTTC...ACTGGCCAAGGTTGTGGAGGAGCTTGTGAACTTGATTAAAGTGTCGTAACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS TCA 90 bp TTCTCCCTCCCCACCATCAGATCCGTTGGGACATTAGCCTGGTGTTaGGTTTACGGAAAAAGGATCGAAGCTTGCAAATCTTGCATTTTT +
Preference number: 5 (lower is better)
Translates to: FSLPTIRSVGTLAWC*VYGKRIEACKSCIF
Trigger: AAAAATGCAAGATTTGCAAGCTTCGATCCTTTTTCCGTAAACTCAACACCAGGCTAATGTCCCAACGGATCTGATGGTGGGGAGGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS GCA 72 bp CCCCGGGGACGGTCCAGTGTCTGGTCCGGGACTGGCTaGCGGACGGCTGGGCCGGATCTGCTCGGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: PRGRSSVWSGTG*RTAGPDLLGRS
Trigger: GCTGCGGCCGAGCAGATCCGGCCCAGCCGTCCGGCAGCCAGTCCCGGACCAGACACTGGACCGTCCCCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS GCA 72 bp CTGGGGAGGTCAGGCCCGCGCCGAGCTGCCTCCCGCTaGCTAAGCGCAGGCCCTGCGCCGCCTTTGCTCCCT +
Preference number: 6 (lower is better)
Translates to: LGRSGPRRAASR*LSAGPAPPLLP
Trigger: AGGGAGCAAAGGCGGCGCAGGGCCTGCGCTTAGGCAGCGGGAGGCAGCTCGGCGCGGGCCTGACCTCCCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS CCA 72 bp GTCCAGTGTCTGGTCCGGGACTGGCTGCCGGACGGCTaGGCCGGATCTGCTCGGCCGCAGCGGGGCGCTCTG +
Preference number: 6 (lower is better)
Translates to: VQCLVRDWLPDG*AGSARPQRGAL
Trigger: CAGAGCGCCCCGCTGCGGCCGAGCAGATCCGGCCCAGCCGTCCGGCAGCCAGTCCCGGACCAGACACTGGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS CAA 90 bp CGCCGAGCTGCCTCCCGCTGCCTAAGCGCAGGCCCTGCGCCGCCTTaGCTCCCTCTTCCCCAGCTCAGCCCGGCCAGCCTGAGACGCGGC +
Preference number: 6 (lower is better)
Translates to: RRAASRCLSAGPAPP*LPLPQLSPASLRRG
Trigger: GCCGCGTCTCAGGCTGGCCGGGCTGAGCTGGGGAAGAGGGAGCAAAGGCGGCGCAGGGCCTGCGCTTAGGCAGCGGGAGGCAGCTCGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS GCA 72 bp GCGCCGAGCTGCCTCCCGCTGCCTAAGCGCAGGCCCTaGGCCGCCTTTGCTCCCTCTTCCCCAGCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: APSCLPLPKRRP*AAFAPSSPAQP
Trigger: GGGCTGAGCTGGGGAAGAGGGAGCAAAGGCGGCGCAGGGCCTGCGCTTAGGCAGCGGGAGGCAGCTCGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS GCA 72 bp CTGAGCAGGCTGACCAGGGAGAAGCCAGTGAGGGTGTaGATCGCCAAGCCGGCCCGCGCGTCCCGGCGCGCC +
Preference number: 6 (lower is better)
Translates to: LSRLTREKPVRV*IAKPARASRRA
Trigger: GGCGCGCCGGGACGCGCGGGCCGGCTTGGCGATGCACACCCTCACTGGCTTCTCCCTGGTCAGCCTGCTCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS CAA 72 bp GCCTCCCGCTGCCTAAGCGCAGGCCCTGCGCCGCCTTaGCTCCCTCTTCCCCAGCTCAGCCCGGCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: ASRCLSAGPAPP*LPLPQLSPASL
Trigger: CAGGCTGGCCGGGCTGAGCTGGGGAAGAGGGAGCAAAGGCGGCGCAGGGCCTGCGCTTAGGCAGCGGGAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS TCA 72 bp GCAGGATCTCCGTGCGTGGTGAGGCCCGGCCCTCGCTaGTGGCCGGCCACACGTCGTAGCCATCTAGCCCAT +
Preference number: 6 (lower is better)
Translates to: AGSPCVVRPGPR*WPATRRSHLAH
Trigger: ATGGGCTAGATGGCTACGACGTGTGGCCGGCCATCAGCGAGGGCCGGGCCTCACCACGCACGGAGATCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS GCA 72 bp CCACGCGGATGGCAGCCTGCACGGCGGTGTTCCAGATaGCAAAGCCGCCCTCCAGGGAGCCATGCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: PRGWQPARRCSR*QSRPPGSHAGH
Trigger: ATGCCCAGCATGGCTCCCTGGAGGGCGGCTTTGGCATCTGGAACACCGCCGTGCAGGCTGCCATCCGCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS TCA 72 bp GAGTGGGTCAATGTTGTGCAGGATCTCCGTGCGTGGTaGGGCCCGGCCCTCGCTGATGGCCGGCCACACGTC +
Preference number: 6 (lower is better)
Translates to: EWVNVVQDLRAW*GPALADGRPHV
Trigger: GACGTGTGGCCGGCCATCAGCGAGGGCCGGGCCTCACCACGCACGGAGATCCTGCACAACATTGACCCACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS GCA 72 bp CTGTGCGGTTATATTCGGCCAGGCGAGCCAGCAGGGTaGGGACCACATCAGGCCGCTGGCCAGCCAGGTCCT +
Preference number: 6 (lower is better)
Translates to: LCGYIRPGEPAG*GPHQAAGQPGP
Trigger: AGGACCTGGCTGGCCAGCGGCCTGATGTGGTCCGCACCCTGCTGGCTCGCCTGGCCGAATATAACCGCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS GCA 72 bp TGGCCGCGTACTTCCGCCGGGCCACATTGCCCATGGTaGGGTAGCGGTACAGGTACTCACGAGGGGACTGCA +
Preference number: 6 (lower is better)
Translates to: WPRTSAGPHCPW*GSGTGTHEGTA
Trigger: TGCAGTCCCCTCGTGAGTACCTGTACCGCTACCGCACCATGGGCAATGTGGCCCGGCGGAAGTACGCGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS GCA 72 bp GGGGGTTCTCAGCTGGGTAGCGTACCGGGATGGCTGTaGGGTTATATTCGGCCAGGCGAGCCAGCAGGGTGC +
Preference number: 6 (lower is better)
Translates to: GGSQLGSVPGWL*GYIRPGEPAGC
Trigger: GCACCCTGCTGGCTCGCCTGGCCGAATATAACCGCACAGCCATCCCGGTACGCTACCCAGCTGAGAACCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS CCA 72 bp CCATGGCCGCGTACTTCCGCCGGGCCACATTGCCCATaGTGCGGTAGCGGTACAGGTACTCACGAGGGGACT +
Preference number: 6 (lower is better)
Translates to: PWPRTSAGPHCP*CGSGTGTHEGT
Trigger: AGTCCCCTCGTGAGTACCTGTACCGCTACCGCACCATGGGCAATGTGGCCCGGCGGAAGTACGCGGCCATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS CCA 72 bp GAGCCCGGGGGTTCTCAGCTGGGTAGCGTACCGGGATaGCTGTGCGGTTATATTCGGCCAGGCGAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: EPGGSQLGSVPG*LCGYIRPGEPA
Trigger: TGCTGGCTCGCCTGGCCGAATATAACCGCACAGCCATCCCGGTACGCTACCCAGCTGAGAACCCCCGGGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS GCA 72 bp AGGTCACCATGGCCGCGTACTTCCGCCGGGCCACATTaGCCATGGTGCGGTAGCGGTACAGGTACTCACGAG +
Preference number: 6 (lower is better)
Translates to: RSPWPRTSAGPH*PWCGSGTGTHE
Trigger: CTCGTGAGTACCTGTACCGCTACCGCACCATGGGCAATGTGGCCCGGCGGAAGTACGCGGCCATGGTGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS CCA 72 bp ACACGTCGTAGCCATCTAGCCCATCGGCTGCTGAGGTaGTACCACCTGCCAGACCCACCAGGGTCGGGTACC +
Preference number: 6 (lower is better)
Translates to: TRRSHLAHRLLR*YHLPDPPGSGT
Trigger: GGTACCCGACCCTGGTGGGTCTGGCAGGTGGTACCACCTCAGCAGCCGATGGGCTAGATGGCTACGACGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS TCA 72 bp GGCCGCCAGCCTGTCCAGCGTAGGGGTCTCGATATCTaGACCATGGTAGCCCACGTCGTGGTAGCCTTGGTC +
Preference number: 6 (lower is better)
Translates to: GRQPVQRRGLDI*TMVAHVVVALV
Trigger: GACCAAGGCTACCACGACGTGGGCTACCATGGTTCAGATATCGAGACCCCTACGCTGGACAGGCTGGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS TCA 72 bp GGTCCAGGGGCAGGCAGTTGGGCTGCTGTGGGCGGATaGTGGAATGCTGGAGTCCTGTGTGGATCTGGTACC +
Preference number: 6 (lower is better)
Translates to: GPGAGSWAAVGG*WNAGVLCGSGT
Trigger: GGTACCAGATCCACACAGGACTCCAGCATTCCATCATCCGCCCACAGCAGCCCAACTGCCTGCCCCTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328668.8
ENST00000509146.1
ENST00000515301.2
CDS CCA 72 bp CGGCTTGTCCGTTGCTTTCGCTTGAGCAGGGGACTGTaGACAAAGCCTAGGCCCCGCACGCCACCTTCCCAA +
Preference number: 6 (lower is better)
Translates to: RLVRCFRLSRGL*TKPRPRTPPSQ
Trigger: TTGGGAAGGTGGCGTGCGGGGCCTAGGCTTTGTCCACAGTCCCCTGCTCAAGCGAAAGCAACGGACAAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS CAA 90 bp CAGTCAGTGATGTGCATCAGTGCCCGGCTTGTCCGTTGCTTTCGCTaGAGCAGGGGACTGTGGACAAAGCCTAGGCCCCGCACGCCACCT +
Preference number: 6 (lower is better)
Translates to: QSVMCISARLVRCFR*SRGLWTKPRPRTPP
Trigger: AGGTGGCGTGCGGGGCCTAGGCTTTGTCCACAGTCCCCTGCTCAAGCGAAAGCAACGGACAAGCCGGGCACTGATGCACATCACTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS TCA 72 bp TGTGCATCAGTGCCCGGCTTGTCCGTTGCTTTCGCTTaGGCAGGGGACTGTGGACAAAGCCTAGGCCCCGCA +
Preference number: 6 (lower is better)
Translates to: CASVPGLSVAFA*AGDCGQSLGPA
Trigger: TGCGGGGCCTAGGCTTTGTCCACAGTCCCCTGCTCAAGCGAAAGCAACGGACAAGCCGGGCACTGATGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS TCA 72 bp CACCTGCCAGACCCACCAGGGTCGGGTACCAGTCAGTaGTGTGCATCAGTGCCCGGCTTGTCCGTTGCTTTC +
Preference number: 6 (lower is better)
Translates to: HLPDPPGSGTSQ*CASVPGLSVAF
Trigger: GAAAGCAACGGACAAGCCGGGCACTGATGCACATCACTGACTGGTACCCGACCCTGGTGGGTCTGGCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS GCA 72 bp GGCAGGCAGTTGGGCTGCTGTGGGCGGATGATGGAATaGTGGAGTCCTGTGTGGATCTGGTACCTGCCAGTG +
Preference number: 6 (lower is better)
Translates to: GRQLGCCGRMME*WSPVWIWYLPV
Trigger: CACTGGCAGGTACCAGATCCACACAGGACTCCAGCATTCCATCATCCGCCCACAGCAGCCCAACTGCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS GCA 72 bp GCCAGACCCACCAGGGTCGGGTACCAGTCAGTGATGTaGATCAGTGCCCGGCTTGTCCGTTGCTTTCGCTTG +
Preference number: 6 (lower is better)
Translates to: ARPTRVGYQSVM*ISARLVRCFRL
Trigger: CAAGCGAAAGCAACGGACAAGCCGGGCACTGATGCACATCACTGACTGGTACCCGACCCTGGTGGGTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS CCA 72 bp CCATTCGTTCCAGGTTCCACCAGCTACCCGGGAAGGTaGCCAGTGTCTGCGGTGGGATCCAATCGCCATAGC +
Preference number: 6 (lower is better)
Translates to: PFVPGSTSYPGR*PVSAVGSNRHS
Trigger: GCTATGGCGATTGGATCCCACCGCAGACACTGGCCACCTTCCCGGGTAGCTGGTGGAACCTGGAACGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS CAA 72 bp ATGTGCATCAGTGCCCGGCTTGTCCGTTGCTTTCGCTaGAGCAGGGGACTGTGGACAAAGCCTAGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: MCISARLVRCFR*SRGLWTKPRPR
Trigger: GCGGGGCCTAGGCTTTGTCCACAGTCCCCTGCTCAAGCGAAAGCAACGGACAAGCCGGGCACTGATGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS GCA 72 bp GGCAGGCAGTTGGGCTGCTGTGGGCGGATGATGGAATaGTGGAGTCCTGTGTGGATCTGGTACCTTCTGAGG +
Preference number: 6 (lower is better)
Translates to: GRQLGCCGRMME*WSPVWIWYLLR
Trigger: CCTCAGAAGGTACCAGATCCACACAGGACTCCAGCATTCCATCATCCGCCCACAGCAGCCCAACTGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509146.1
CDS TCA 72 bp CACAGTTGTCATAGGTGTAATAGTCCACATTGCCCGTaGGCGAGCCCAGGAAGGTGTCGAAGCCCCGACGGG +
Preference number: 6 (lower is better)
Translates to: HSCHRCNSPHCP*ASPGRCRSPDG
Trigger: CCCGTCGGGGCTTCGACACCTTCCTGGGCTCGCTCACGGGCAATGTGGACTATTACACCTATGACAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328668.8
ENST00000509146.1
ENST00000515301.2
CDS GCA 72 bp GCCAGCCTGAGACGCGGCGTGGCAGCTTCCAAAAAGTaGTCTCTACCATCCTCTGACTCCCCTCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: ASLRRGVAASKK*SLPSSDSPLPS
Trigger: AGAAGGAAGAGGGGAGTCAGAGGATGGTAGAGAGCACTTTTTGGAAGCTGCCACGCCGCGTCTCAGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328668.8
CDS GCA 72 bp GGCAGGCAGTTGGGCTGCTGTGGGCGGATGATGGAATaGTGGAGTCCTGTGTGGATCTGGTACCTTTCCAGA +
Preference number: 6 (lower is better)
Translates to: GRQLGCCGRMME*WSPVWIWYLSR
Trigger: TCTGGAAAGGTACCAGATCCACACAGGACTCCAGCATTCCATCATCCGCCCACAGCAGCCCAACTGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515301.2
CDS CAA 72 bp CCAGTCAGTGATGTGCATCAGTGCCCGGCTTGTCCGTaGCTTTCGCTTGAGCAGGGGACTGTGGACAAAGCC +
Preference number: 6 (lower is better)
Translates to: PVSDVHQCPACP*LSLEQGTVDKA
Trigger: GGCTTTGTCCACAGTCCCCTGCTCAAGCGAAAGCAACGGACAAGCCGGGCACTGATGCACATCACTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS GCA 72 bp CAGTCAGTGATGTGCATCAGTGCCCGGCTTGTCCGTTaGTTTCGCTTGAGCAGGGGACTGTGGACAAAGCCT +
Preference number: 6 (lower is better)
Translates to: QSVMCISARLVR*FRLSRGLWTKP
Trigger: AGGCTTTGTCCACAGTCCCCTGCTCAAGCGAAAGCAACGGACAAGCCGGGCACTGATGCACATCACTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS CCA 72 bp CCCATTAAAGTCAGGATGAGCCCGGGGGTTCTCAGCTaGGTAGCGTACCGGGATGGCTGTGCGGTTATATTC +
Preference number: 6 (lower is better)
Translates to: PIKVRMSPGVLS*VAYRDGCAVIF
Trigger: GAATATAACCGCACAGCCATCCCGGTACGCTACCCAGCTGAGAACCCCCGGGCTCATCCTGACTTTAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328668.8
ENST00000515301.2
CDS CCA 72 bp ATTCTCACCCTCGTGCAGGTCGAAGCCGCACACGCCTaGGCCATCACAGTTGTCATAGGTGTAATAGTCCAC +
Preference number: 6 (lower is better)
Translates to: ILTLVQVEAAHA*AITVVIGVIVH
Trigger: GTGGACTATTACACCTATGACAACTGTGATGGCCCAGGCGTGTGCGGCTTCGACCTGCACGAGGGTGAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328668.8
ENST00000509146.1
ENST00000515301.2
CDS CCA 72 bp AGGCAGTTGGGCTGCTGTGGGCGGATGATGGAATGCTaGAGTCCTGTGTGGATCTGGTACCTTCTGAGGAAT +
Preference number: 6 (lower is better)
Translates to: RQLGCCGRMMEC*SPVWIWYLLRN
Trigger: ATTCCTCAGAAGGTACCAGATCCACACAGGACTCCAGCATTCCATCATCCGCCCACAGCAGCCCAACTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509146.1
CDS CCA 72 bp AGGCAGTTGGGCTGCTGTGGGCGGATGATGGAATGCTaGAGTCCTGTGTGGATCTGGTACCTTTCCAGAACT +
Preference number: 6 (lower is better)
Translates to: RQLGCCGRMMEC*SPVWIWYLSRT
Trigger: AGTTCTGGAAAGGTACCAGATCCACACAGGACTCCAGCATTCCATCATCCGCCCACAGCAGCCCAACTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515301.2
CDS CAA 72 bp AGGAATATGCACCTGGCCAATTGTCCCACCACGGGGTaGCAAAACCCAGACAGGCAGAAGGAACCGATTCAC +
Preference number: 6 (lower is better)
Translates to: RNMHLANCPTTG*QNPDRQKEPIH
Trigger: GTGAATCGGTTCCTTCTGCCTGTCTGGGTTTTGCAACCCCGTGGTGGGACAATTGGCCAGGTGCATATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509146.1
CDS CAA 72 bp GATCTGGTACCTTCTGAGGAATATGCACCTGGCCAATaGTCCCACCACGGGGTTGCAAAACCCAGACAGGCA +
Preference number: 6 (lower is better)
Translates to: DLVPSEEYAPGQ*SHHGVAKPRQA
Trigger: TGCCTGTCTGGGTTTTGCAACCCCGTGGTGGGACAATTGGCCAGGTGCATATTCCTCAGAAGGTACCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509146.1
CDS CAA 90 bp TACCTTCTGAGGAATATGCACCTGGCCAATTGTCCCACCACGGGGTaGCAAAACCCAGACAGGCAGAAGGAACCGATTCACCTTTCCAGA +
Preference number: 6 (lower is better)
Translates to: YLLRNMHLANCPTTG*QNPDRQKEPIHLSR
Trigger: TCTGGAAAGGTGAATCGGTTCCTTCTGCCTGTCTGGGTTTTGCAACCCCGTGGTGGGACAATTGGCCAGGTGCATATTCCTCAGAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509146.1
CDS TCA 72 bp CCCACCATCAGATCCGTTGGGACATTAGCCTGGTGTTaGGTTTACGGAAAAAGGATCGAAGCTTGCAAATCT +
Preference number: 6 (lower is better)
Translates to: PTIRSVGTLAWC*VYGKRIEACKS
Trigger: AGATTTGCAAGCTTCGATCCTTTTTCCGTAAACTCAACACCAGGCTAATGTCCCAACGGATCTGATGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328668.8