Pregenerated sensors for ARSF (Homo sapiens)
Ensembl gene IDs: ENSG00000062096Ensembl transcript IDs: ENST00000359361.2, ENST00000381127.6
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | GCTTCCTTCACCATAATGGATCCAGCTCGTTCAGCCTTCATGGGCTaGTCCGTGATCTCGTGCCCCCGCATGAGGAGGCAGTCCCAGTAT | + |
Preference number: 5 (lower is better) Translates to: ASFTIMDPARSAFMG*SVISCPRMRRQSQY Trigger: ATACTGGGACTGCCTCCTCATGCGGGGGCACGAGATCACGGAGCAGCCCATGAAGGCTGAACGAGCTGGATCCATTATGGTGAAGGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS TCA 90 bp | AGGGTGAGGATGGCAATGGCAACTAGCTGCACACAGAGCCAGAGCTaGCTCTCAAAGGCTAATTCCGTGTTACGAGAGGGGTCCGGCCAG | + |
Preference number: 5 (lower is better) Translates to: RVRMAMATSCTQSQS*LSKANSVLREGSGQ Trigger: CTGGCCGGACCCCTCTCGTAACACGGAATTAGCCTTTGAGAGTCAGCTCTGGCTCTGTGTGCAGCTAGTTGCCATTGCCATCCTCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS TCA 90 bp | ATTCCGTGTTACGAGAGGGGTCCGGCCAGCAGCTGTCAACGAGAGTaGACGGCATGCCATAGTAGTAGTCAAACCCATAATTATATGGAT | + |
Preference number: 5 (lower is better) Translates to: IPCYERGPASSCQRE*TACHSSSQTHNYMD Trigger: ATCCATATAATTATGGGTTTGACTACTACTATGGCATGCCGTTCACTCTCGTTGACAGCTGCTGGCCGGACCCCTCTCGTAACACGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS CCA 90 bp | GAGAGTGAACGGCATGCCATAGTAGTAGTCAAACCCATAATTATATaGATGGTGGCACTGGTCACTTCGGGAGTCGCAGTTCAAGCCTTG | + |
Preference number: 5 (lower is better) Translates to: ESERHAIVVVKPIII*MVALVTSGVAVQAL Trigger: CAAGGCTTGAACTGCGACTCCCGAAGTGACCAGTGCCACCATCCATATAATTATGGGTTTGACTACTACTATGGCATGCCGTTCACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS TCA 90 bp | TTCTTGTTGTCAGTTTATACAAACAAAAAGGTTGGATCCCAACAGTaGCTTCTATCTCAACAGCAGTGGAAAAGTAACAGAAGGGCCAGG | + |
Preference number: 5 (lower is better) Translates to: FLLSVYTNKKVGSQQ*LLSQQQWKSNRRAR Trigger: CCTGGCCCTTCTGTTACTTTTCCACTGCTGTTGAGATAGAAGTCACTGTTGGGATCCAACCTTTTTGTTTGTATAAACTGACAACAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381127.6 |
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CDS GCA 72 bp | ACCATAATGGATCCAGCTCGTTCAGCCTTCATGGGCTaGTCCGTGATCTCGTGCCCCCGCATGAGGAGGCAG | + |
Preference number: 6 (lower is better) Translates to: TIMDPARSAFMG*SVISCPRMRRQ Trigger: CTGCCTCCTCATGCGGGGGCACGAGATCACGGAGCAGCCCATGAAGGCTGAACGAGCTGGATCCATTATGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS TCA 72 bp | CAGAGACCCAGCCGCTCAGCTTCCCAAAGGTTAGGGTaGGGATGGCAATGGCAACTAGCTGCACACAGAGCC | + |
Preference number: 6 (lower is better) Translates to: QRPSRSASQRLG*GWQWQLAAHRA Trigger: GGCTCTGTGTGCAGCTAGTTGCCATTGCCATCCTCACCCTAACCTTTGGGAAGCTGAGCGGCTGGGTCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS TCA 72 bp | CATTATCCCCATACAAGCCATGCTTGCTGGTGCCAGTaGAATCGTCCGTGGTGGGGAGAGGTGTGTGCACGT | + |
Preference number: 6 (lower is better) Translates to: HYPHTSHACWCQ*NRPWWGEVCAR Trigger: ACGTGCACACACCTCTCCCCACCACGGACGATTTCACTGGCACCAGCAAGCATGGCTTGTATGGGGATAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS TCA 72 bp | TACGAGAGGGGTCCGGCCAGCAGCTGTCAACGAGAGTaGACGGCATGCCATAGTAGTAGTCAAACCCATAAT | + |
Preference number: 6 (lower is better) Translates to: YERGPASSCQRE*TACHSSSQTHN Trigger: ATTATGGGTTTGACTACTACTATGGCATGCCGTTCACTCTCGTTGACAGCTGCTGGCCGGACCCCTCTCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS TCA 72 bp | ATGGCAATGGCAACTAGCTGCACACAGAGCCAGAGCTaGCTCTCAAAGGCTAATTCCGTGTTACGAGAGGGG | + |
Preference number: 6 (lower is better) Translates to: MAMATSCTQSQS*LSKANSVLREG Trigger: CCCCTCTCGTAACACGGAATTAGCCTTTGAGAGTCAGCTCTGGCTCTGTGTGCAGCTAGTTGCCATTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS GCA 72 bp | CAAGGCTGCAAGTGTTGTCTCATTAAGAGGGAGGCCTaGGGGGACTGCAAGATTTTGGATGACACGTCTATT | + |
Preference number: 6 (lower is better) Translates to: QGCKCCLIKREA*GDCKILDDTSI Trigger: AATAGACGTGTCATCCAAAATCTTGCAGTCCCCGCAGGCCTCCCTCTTAATGAGACAACACTTGCAGCCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS CCA 72 bp | CGGCATGCCATAGTAGTAGTCAAACCCATAATTATATaGATGGTGGCACTGGTCACTTCGGGAGTCGCAGTT | + |
Preference number: 6 (lower is better) Translates to: RHAIVVVKPIII*MVALVTSGVAV Trigger: AACTGCGACTCCCGAAGTGACCAGTGCCACCATCCATATAATTATGGGTTTGACTACTACTATGGCATGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS CAA 72 bp | CTCATTAAGAGGGAGGCCTGCGGGGACTGCAAGATTTaGGATGACACGTCTATTACCACTAGAAACCATACC | + |
Preference number: 6 (lower is better) Translates to: LIKREACGDCKI*DDTSITTRNHT Trigger: GGTATGGTTTCTAGTGGTAATAGACGTGTCATCCAAAATCTTGCAGTCCCCGCAGGCCTCCCTCTTAATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS GCA 72 bp | TGGTGCCATTTGCCTATAAGCCCCGTGCTGTATCCTTaGTTCTTTAGCAAGGCTGCAAGTGTTGTCTCATTA | + |
Preference number: 6 (lower is better) Translates to: WCHLPISPVLYP*FFSKAASVVSL Trigger: TAATGAGACAACACTTGCAGCCTTGCTAAAGAAGCAAGGATACAGCACGGGGCTTATAGGCAAATGGCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |
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CDS CCA 72 bp | TCATTAAGAGGGAGGCCTGCGGGGACTGCAAGATTTTaGATGACACGTCTATTACCACTAGAAACCATACCT | + |
Preference number: 6 (lower is better) Translates to: SLRGRPAGTARF*MTRLLPLETIP Trigger: AGGTATGGTTTCTAGTGGTAATAGACGTGTCATCCAAAATCTTGCAGTCCCCGCAGGCCTCCCTCTTAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6 |