RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARSB (Homo sapiens)

Ensembl gene IDs: ENSG00000113273

Ensembl transcript IDs: ENST00000264914.10, ENST00000396151.7, ENST00000521011.1, ENST00000521117.1, ENST00000521800.2, ENST00000565165.2

Found 449 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAACTGGAGACAGCTGTTGGGAGGACAGCAGCGATAACAGATAGGTaGCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCAGCCCTG +
Preference number: 1 (lower is better)
Translates to: ELETAVGRTAAITDR*PVAMASNGYLHPAL
Trigger: CAGGGCTGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGCTGTCTCCAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR GCA 90 bp GGGATTCGGAGGATGCAGAAGGAACATCTGGGCTCAGCTATTTCATaGTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGG +
Preference number: 1 (lower is better)
Translates to: GIRRMQKEHLGSAIS*CRPYTSKWEVMAVW
Trigger: CCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCATCCTCCGAATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CCA 90 bp CATCTGGGCTCAGCTATTTCATGCTGTCGGCCATACACTTCCAAGTaGGAGGTGATGGCAGTTTGGTCAGCTGTTTGCCAACCCAGGAGT +
Preference number: 1 (lower is better)
Translates to: HLGSAISCCRPYTSK*EVMAVWSAVCQPRS
Trigger: ACTCCTGGGTTGGCAAACAGCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR TCA 90 bp AGAGGACGCTACAACCTTGCTATAGAGTGTCCTGTGACTGCCCAGTaGTGTAGATTATGCTCCTACCCCAGGAGGGGCAGCTTGAGAACA +
Preference number: 1 (lower is better)
Translates to: RGRYNLAIECPVTAQ*CRLCSYPRRGSLRT
Trigger: TGTTCTCAAGCTGCCCCTCCTGGGGTAGGAGCATAATCTACATCACTGGGCAGTCACAGGACACTCTATAGCAAGGTTGTAGCGTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CCA 90 bp TCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTaGTCAGCTGTTTGCCAACCCAGGAGTTGGGTAAAGGTTGGTAAG +
Preference number: 1 (lower is better)
Translates to: SCCRPYTSKWEVMAV*SAVCQPRSWVKVGK
Trigger: CTTACCAACCTTTACCCAACTCCTGGGTTGGCAAACAGCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR TCA 90 bp GCAAAACGTCGCAGCTTCAAAGACCTTCCATGGAGGGCGATGGGCTaGGGACAATCTTGTTCTTCACGTAAAACACAGGCCCACAATCTC +
Preference number: 1 (lower is better)
Translates to: AKRRSFKDLPWRAMG*GQSCSSRKTQAHNL
Trigger: GAGATTGTGGGCCTGTGTTTTACGTGAAGAACAAGATTGTCCTCAGCCCATCGCCCTCCATGGAAGGTCTTTGAAGCTGCGACGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR CCA 90 bp CCCAGAACCTCAAAACAAGCAGTAAAACAGAGAATAAGAGGACTGTaGGTGTGCCCTCCTCTGCTTTACCAAGGCCCAGTATCCCAGACA +
Preference number: 1 (lower is better)
Translates to: PRTSKQAVKQRIRGL*VCPPLLYQGPVSQT
Trigger: TGTCTGGGATACTGGGCCTTGGTAAAGCAGAGGAGGGCACACCCACAGTCCTCTTATTCTCTGTTTTACTGCTTGTTTTGAGGTTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CCA 90 bp TCTAAGCAAAACGTCGCAGCTTCAAAGACCTTCCATGGAGGGCGATaGGCTGAGGACAATCTTGTTCTTCACGTAAAACACAGGCCCACA +
Preference number: 1 (lower is better)
Translates to: SKQNVAASKTFHGGR*AEDNLVLHVKHRPT
Trigger: TGTGGGCCTGTGTTTTACGTGAAGAACAAGATTGTCCTCAGCCCATCGCCCTCCATGGAAGGTCTTTGAAGCTGCGACGTTTTGCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR GCA 90 bp GGACTGTTCCACATTAGTAAGACATTAGTGGGATTGAGAAAGGGCTaGAGGTGTCAAACTGCATCCTCTTTGCCAGACCCCAGAACCTCA +
Preference number: 1 (lower is better)
Translates to: GLFHISKTLVGLRKG*RCQTASSLPDPRTS
Trigger: TGAGGTTCTGGGGTCTGGCAAAGAGGATGCAGTTTGACACCTGCAGCCCTTTCTCAATCCCACTAATGTCTTACTAATGTGGAACAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR TCA 90 bp ACTGTGGGGGTTAAACAGGAAAAAGACCATCACGATTTCCAAATCTaGGTCTGGGTCCTGTTCCCTGATGTATCTTCTTCACATCAGCCA +
Preference number: 1 (lower is better)
Translates to: TVGVKQEKDHHDFQI*VWVLFPDVSSSHQP
Trigger: TGGCTGATGTGAAGAAGATACATCAGGGAACAGGACCCAGACTCAGATTTGGAAATCGTGATGGTCTTTTTCCTGTTTAACCCCCACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR CCA 90 bp ACTTCATCTACAGAAGGCAGCAGCTATTTGATTCTAGTCAGTTGTTaGCCTTCTGGAAATGTGGGTGCAGTGCTGTCAGACCTTCCTATT +
Preference number: 1 (lower is better)
Translates to: TSSTEGSSYLILVSC*PSGNVGAVLSDLPI
Trigger: AATAGGAAGGTCTGACAGCACTGCACCCACATTTCCAGAAGGCCAACAACTGACTAGAATCAAATAGCTGCTGCCTTCTGTAGATGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR TCA 90 bp AAATTAGACACCTCGGTGTGGTTTAAGAGCAAGAGAAGGGCCAAGTaGACCCAGGTTGGGATAACAAATGAGACAAGAGTCGTGAGAAAA +
Preference number: 1 (lower is better)
Translates to: KLDTSVWFKSKRRAK*TQVGITNETRVVRK
Trigger: TTTTCTCACGACTCTTGTCTCATTTGTTATCCCAACCTGGGTTCACTTGGCCCTTCTCTTGCTCTTAAACCACACCGAGGTGTCTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR TCA 90 bp CCCAGTATCCCAGACACTGGCCACTTGCTTTTTCATATCCTTTCCTaGGGTTTCTTCTCACTGCTAGTAAATAGCAGTGCAAGTCTTAAT +
Preference number: 1 (lower is better)
Translates to: PSIPDTGHLLFHILS*GFFSLLVNSSASLN
Trigger: ATTAAGACTTGCACTGCTATTTACTAGCAGTGAGAAGAAACCTCAGGAAAGGATATGAAAAAGCAAGTGGCCAGTGTCTGGGATACTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR TCA 90 bp AAAAGACCATCACGATTTCCAAATCTGAGTCTGGGTCCTGTTCCCTaGTGTATCTTCTTCACATCAGCCAGCTCTATCTATCACAACATA +
Preference number: 1 (lower is better)
Translates to: KRPSRFPNLSLGPVP*CIFFTSASSIYHNI
Trigger: TATGTTGTGATAGATAGAGCTGGCTGATGTGAAGAAGATACATCAGGGAACAGGACCCAGACTCAGATTTGGAAATCGTGATGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR TCA 90 bp AATGAGTGCAGTGGATCTGTATTGGAACTTGGGAACAATAGAGATTaGAGATTTGAAGGGTGGATACTTCATCTACAGAAGGCAGCAGCT +
Preference number: 1 (lower is better)
Translates to: NECSGSVLELGNNRD*RFEGWILHLQKAAA
Trigger: AGCTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAATCTCTATTGTTCCCAAGTTCCAATACAGATCCACTGCACTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR TCA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCGGTGGGAGAATCACTTaGGCCCAGGAGTTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: AVGRTAAITDRCPVAMASGGRIT*AQEFEA
Trigger: AGCCTCAAACTCCTGGGCTCAAGTGATTCTCCCACC...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR TCA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCCTTCCAAGTGGGAGGTaGTGGCAGTTTGGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: AVGRTAAITDRCPVAMASLPSGR*WQFGQL
Trigger: CAGCTGACCAAACTGCCATCACCTCCCACTTGGAAG...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR GCA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCGCCTCGCTGAACAGATaGCACAGAGCCAAGCATCTC +
Preference number: 2 (lower is better)
Translates to: AVGRTAAITDRCPVAMASASLNR*HRAKHL
Trigger: GAGATGCTTGGCTCTGTGGCATCTGTTCAGCGAGGC...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR CCA 90 bp GTAGCGATGGCCTCCAACGGCTACCTACACCCAGCCCTGGGATTCGGAGGATGCCCATACACTTCCAAGTaGGAGGTGATGGCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: VAMASNGYLHPALGFGGCPYTSK*EVMAVW
Trigger: CCAAACTGCCATCACCTCCCACTTGGAAGTGTATGG...GCATCCTCCGAATCCCAGGGCTGGGTGTAGGTAGCCGTTGGAGGCCATCGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR GCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCCCACCTCTAGACACATaGTCCAGCCAACAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIPPLDT*SSQQQE
Trigger: CTCCTGCTGTTGGCTGGAGCATGTGTCTAGAGGTGG...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR GCA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCGTTTGGTCAGCTGTTTaGCAACCCAGGAGTTGGGTA +
Preference number: 2 (lower is better)
Translates to: AVGRTAAITDRCPVAMASVWSAV*QPRSWV
Trigger: TACCCAACTCCTGGGTTGGCAAACAGCTGACCAAAC...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR GCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCACTGGGATTCGGAGGATaGAGAAGGAACATCTGGGCT +
Preference number: 2 (lower is better)
Translates to: AITDRCPVAMASNGYLHPLGFGG*RRNIWA
Trigger: AGCCCAGATGTTCCTTCTGCATCCTCCGAATCCCAG...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR GCA 90 bp AAGTCCACTGGGTGCAGAACATCCCCCACTGTGCCTGAAAACCAAGGAACTAGACTGCAGGTGTCAAACTaGATCCTCTTTGCCAGACCC +
Preference number: 2 (lower is better)
Translates to: KSTGCRTSPTVPENQGTRLQVSN*ILFARP
Trigger: GGGTCTGGCAAAGAGGATGCAGTTTGACACCTGCAG...TCTAGTTCCTTGGTTTTCAGGCACAGTGGGGGATGTTCTGCACCCAGTGGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR CCA 90 bp AAGTCCACTGGGTGCAGAACATCCCCCACTGTGCCTGAAAACCAAGGAACTAGATTTGGGTGCCTGAGGTaGGAGAATCACTTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: KSTGCRTSPTVPENQGTRFGCLR*ENHLSP
Trigger: TGGGCTCAAGTGATTCTCCCACCTCAGGCACCCAAA...TCTAGTTCCTTGGTTTTCAGGCACAGTGGGGGATGTTCTGCACCCAGTGGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CAA 90 bp CACTTGGAGTGCCTGAACATGATCCTTCACCGACAGGGAGAAGCCTaGGCCAACAGAACCATTAATCACTGTCTGCTCCCTTCATTTGCG +
Preference number: 2 (lower is better)
Translates to: HLECLNMILHRQGEA*ANRTINHCLLPSFA
Trigger: CGCAAATGAAGGGAGCAGACAGTGATTAATGGTTCTGTTGGCCAAGGCTTCTCCCTGTCGGTGAAGGATCATGTTCAGGCACTCCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR TCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCAACATTTCTCTGGGTTTaGCACTCTCTGGAGCTAATA +
Preference number: 2 (lower is better)
Translates to: AITDRCPVAMASNGYLHPTFLWV*HSLELI
Trigger: TATTAGCTCCAGAGAGTGTCAAACCCAGAGAAATGT...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR GCA 90 bp GCCTCTAGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCACAACAGCAGGAGTGTTaGAGATTTTATCAGCTTCTT +
Preference number: 2 (lower is better)
Translates to: ASSFSPRGKSKAGLSSVPQQQEC*RFYQLL
Trigger: AAGAAGCTGATAAAATCTGCAACACTCCTGCTGTTG...TGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCTAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR GCA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCAAGCCACAGTCATGGTaGAGGCATTTTGCTGTTGAC +
Preference number: 2 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSKPQSW*RHFAVD
Trigger: GTCAACAGCAAAATGCCTGCACCATGACTGTGGCTT...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR CCA 90 bp AGGGGTGAACCAAGAGGGGTGGTTCACTTGGAGTGCCTGAACATGATCCTTCACGACAGGGAGAAGCCTTaGCCAACAGAACCATTAATC +
Preference number: 2 (lower is better)
Translates to: RGEPRGVVHLECLNMILHDREKP*PTEPLI
Trigger: GATTAATGGTTCTGTTGGCCAAGGCTTCTCCCTGTC...GTGAAGGATCATGTTCAGGCACTCCAAGTGAACCACCCCTCTTGGTTCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR CCA 90 bp GGAGGATGCAGAAGGAACATCTGGGCTCAGCTATTTCATGCTGTCGGCCATACAAGAATAAGAGGACTGTaGGTGTGCCCTCCTCTGCTT +
Preference number: 2 (lower is better)
Translates to: GGCRRNIWAQLFHAVGHTRIRGL*VCPPLL
Trigger: AAGCAGAGGAGGGCACACCCACAGTCCTCTTATTCT...TGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCATCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR TCA 90 bp AGGGGTGAACCAAGAGGGGTGGTTCACTTGGAGTGCCTGAACATGATCCTTCACGCCTCCAGGATTCAGTaGGAACTTCCTATTTCAAGT +
Preference number: 2 (lower is better)
Translates to: RGEPRGVVHLECLNMILHASRIQ*ELPISS
Trigger: ACTTGAAATAGGAAGTTCTCACTGAATCCTGGAGGC...GTGAAGGATCATGTTCAGGCACTCCAAGTGAACCACCCCTCTTGGTTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR GCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAACTCTTCTGCCACTTCTaGAGGAGCCACCCGAGGCCT +
Preference number: 2 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKLFCHF*RSHPRP
Trigger: AGGCCTCGGGTGGCTCCTGCAGAAGTGGCAGAAGAG...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR-3UTR GCA 90 bp TCTGAGTCTGGGTCCTGTTCCCTGATGTATCTTCTTCACATCAGCCAGCTCTATAGTTCCCTGACCCCCTaGAGGAAGCTAACAATACCC +
Preference number: 2 (lower is better)
Translates to: SESGSCSLMYLLHISQLYSSLTP*RKLTIP
Trigger: GGGTATTGTTAGCTTCCTGCAGGGGGTCAGGGAACT...ATAGAGCTGGCTGATGTGAAGAAGATACATCAGGGAACAGGACCCAGACTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR CCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCAATAAAACTGGCTATTaGCAGAGGGGAATCGAACGT +
Preference number: 2 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEINKTGY*QRGIER
Trigger: ACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATT...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR GCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCTCTGCTCCCTTCATTTaGGTAAGAAATGTGATTCAC +
Preference number: 2 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEISAPFI*VRNVIH
Trigger: GTGAATCACATTTCTTACGCAAATGAAGGGAGCAGA...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR CCA 90 bp AAGTCCACTGGGTGCAGAACATCCCCCACTGTGCCTGAAAACCAAGGAACTAGATGCAGAAGGAACATCTaGGCTCAGCTATTTCATGCT +
Preference number: 2 (lower is better)
Translates to: KSTGCRTSPTVPENQGTRCRRNI*AQLFHA
Trigger: AGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCA...TCTAGTTCCTTGGTTTTCAGGCACAGTGGGGGATGTTCTGCACCCAGTGGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CAA 90 bp GGATACTTCATCTACAGAAGGCAGCAGCTATTTGATTCTAGTCAGTaGTTGGCCTTCTGGAAATGTGGGTGCAGTGCTGTCAGACCTTCC +
Preference number: 2 (lower is better)
Translates to: GYFIYRRQQLFDSSQ*LAFWKCGCSAVRPS
Trigger: GGAAGGTCTGACAGCACTGCACCCACATTTCCAGAAGGCCAACAACTGACTAGAATCAAATAGCTGCTGCCTTCTGTAGATGAAGTATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR TCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATAGCCACCCGAGGCCTTaGGGGGCCCTTTCAGAACCT +
Preference number: 2 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHSHPRP*GALSEP
Trigger: AGGTTCTGAAAGGGCCCCTCAAGGCCTCGGGTGGCT...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR CAA 90 bp TACTTCATCTACAGAAGGCAGCAGCTATTTGATTCTAGTCAGTTGTaGGCCTTCTGGAAATGTGGGTGCAGTGCTGTCAGACCTTCCTAT +
Preference number: 2 (lower is better)
Translates to: YFIYRRQQLFDSSQL*AFWKCGCSAVRPSY
Trigger: ATAGGAAGGTCTGACAGCACTGCACCCACATTTCCAGAAGGCCAACAACTGACTAGAATCAAATAGCTGCTGCCTTCTGTAGATGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR GCA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAAAGTTCCCGCCTCTTCTaGCACTTCTGCAGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQSSRLF*HFCRSH
Trigger: GTGGCTCCTGCAGAAGTGGCAGAAGAGGCGGGAACT...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR CAA 90 bp AATAAACATATCCCTAGTTCCTATTCCAGCTTTTTCCCTGCTGTTTaGTCCTCCATTCTTCCAGCAGACAACAGGACTAGTTCCCTGACC +
Preference number: 2 (lower is better)
Translates to: NKHIPSSYSSFFPAV*SSILPADNRTSSLT
Trigger: GGTCAGGGAACTAGTCCTGTTGTCTGCTGGAAGAATGGAGGACAAAACAGCAGGGAAAAAGCTGGAATAGGAACTAGGGATATGTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR TCA 90 bp TTCCAAGCATTGGTGAACACAATGGTGGGGCTAATGCAGAAAAGAGTATCATTTAAGAGAAGGGCCAAGTaGACCCAGGTTGGGATAACA +
Preference number: 2 (lower is better)
Translates to: FQALVNTMVGLMQKRVSFKRRAK*TQVGIT
Trigger: TGTTATCCCAACCTGGGTTCACTTGGCCCTTCTCTT...AAATGATACTCTTTTCTGCATTAGCCCCACCATTGTGTTCACCAATGCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR TCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAAAAGGCACTTTTCCTATaGTGCCAGGTTCCTAGTTCC +
Preference number: 2 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKKALFL*CQVPSS
Trigger: GGAACTAGGAACCTGGCATCATAGGAAAAGTGCCTT...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR-3UTR TCA 90 bp ATTGAAGATTTGAAGGGTGGATACTTCATCTACAGAAGGCAGCAGCTATTTGATTGGAGGGCGATGGGCTaGGGACAATCTTGTTCTTCA +
Preference number: 2 (lower is better)
Translates to: IEDLKGGYFIYRRQQLFDWRAMG*GQSCSS
Trigger: TGAAGAACAAGATTGTCCTCAGCCCATCGCCCTCCA...ATCAAATAGCTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR TCA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAAGATGAAGAGATGGCCTaGGGAAGTCCTCTCCCCCTG +
Preference number: 2 (lower is better)
Translates to: TFQARIRGNNLRLVRILKDEEMA*GSPLPL
Trigger: CAGGGGGAGAGGACTTCCTCAGGCCATCTCTTCATC...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR GCA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGGAGGTTGAAAACCATTaGACTAGGTCATTCCACCCG +
Preference number: 2 (lower is better)
Translates to: VFPITRDLKPAILELGYLEVENH*TRSFHP
Trigger: CGGGTGGAATGACCTAGTGCAATGGTTTTCAACCTC...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR CCA 90 bp TTCAGTGAGAACTTCCTATTTCAAGTTAAGTTCCCAGCTGTCCCAAGGCTTAGGTTAGACACCTCGGTGTaGTTTAAGAGCAAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: FSENFLFQVKFPAVPRLRLDTSV*FKSKRR
Trigger: CCTTCTCTTGCTCTTAAACCACACCGAGGTGTCTAA...CCTAAGCCTTGGGACAGCTGGGAACTTAACTTGAAATAGGAAGTTCTCACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR TCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAATCAGAACCTTGGGTCTaGAGTCATTTCTTATGCCCT +
Preference number: 2 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKSEPWV*SHFLCP
Trigger: AGGGCATAAGAAATGACTTCAGACCCAAGGTTCTGA...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR-3UTR GCA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGATTCCAGCTTTTTCCCTaGTGTTTTGTCCTCCATTCT +
Preference number: 2 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRFQLFP*CFVLHS
Trigger: AGAATGGAGGACAAAACAGCAGGGAAAAAGCTGGAA...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR CCA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGTAAGACAGCCTCCTaGGGCCCCTTCTTTCTTGGA +
Preference number: 2 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVSKTAS*GPFFLG
Trigger: TCCAAGAAAGAAGGGGCCCCAGGAGGCTGTCTTACT...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR CAA 90 bp GCAGTGGATCTGTATTGGAACTTGGGAACAATAGAGATTGAAGATTaGAAGGGTGGATACTTCATCTACAGAAGGCAGCAGCTATTTGAT +
Preference number: 2 (lower is better)
Translates to: AVDLYWNLGTIEIED*KGGYFIYRRQQLFD
Trigger: ATCAAATAGCTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAATCTCTATTGTTCCCAAGTTCCAATACAGATCCACTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR TCA 90 bp TTCCAAGCATTGGTGAACACAATGGTGGGGCTAATGCAGAAAAGAGTATCATTTGGTTGGGATAACAAATaGGACAAGAGTCGTGAGAAA +
Preference number: 2 (lower is better)
Translates to: FQALVNTMVGLMQKRVSFGWDNK*DKSREK
Trigger: TTTCTCACGACTCTTGTCTCATTTGTTATCCCAACC...AAATGATACTCTTTTCTGCATTAGCCCCACCATTGTGTTCACCAATGCTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR GCA 90 bp TTCCAAGCATTGGTGAACACAATGGTGGGGCTAATGCAGAAAAGAGTATCATTTCCATTAATCACTGTCTaGTCCCTTCATTTGCGTAAG +
Preference number: 2 (lower is better)
Translates to: FQALVNTMVGLMQKRVSFPLITV*SLHLRK
Trigger: CTTACGCAAATGAAGGGAGCAGACAGTGATTAATGG...AAATGATACTCTTTTCTGCATTAGCCCCACCATTGTGTTCACCAATGCTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR TCA 90 bp GGTATTTCCAGAGTGTTGAATACTATGATTATGTTCAGCAGGGACTATAAACTTCTGGGTCCTGTTCCCTaGTGTATCTTCTTCACATCA +
Preference number: 2 (lower is better)
Translates to: GISRVLNTMIMFSRDYKLLGPVP*CIFFTS
Trigger: TGATGTGAAGAAGATACATCAGGGAACAGGACCCAG...AAGTTTATAGTCCCTGCTGAACATAATCATAGTATTCAACACTCTGGAAATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR GCA 90 bp ATTGAAGATTTGAAGGGTGGATACTTCATCTACAGAAGGCAGCAGCTATTTGATAACTGGCAGTCATCTTaGTCATCTGTGTGTTCATTT +
Preference number: 2 (lower is better)
Translates to: IEDLKGGYFIYRRQQLFDNWQSS*SSVCSF
Trigger: AAATGAACACACAGATGAGCAAGATGACTGCCAGTT...ATCAAATAGCTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR TCA 90 bp GGTATTTCCAGAGTGTTGAATACTATGATTATGTTCAGCAGGGACTATAAACTTGGGAACAATAGAGATTaGAGATTTGAAGGGTGGATA +
Preference number: 2 (lower is better)
Translates to: GISRVLNTMIMFSRDYKLGNNRD*RFEGWI
Trigger: TATCCACCCTTCAAATCTTCAATCTCTATTGTTCCC...AAGTTTATAGTCCCTGCTGAACATAATCATAGTATTCAACACTCTGGAAATACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR CAA 90 bp CACTTTAAAACATACAATTCAGTGGCAGTAATTGCATTTATGATGTaGTATAACCATGACCACTATCTAGTTCCAGAACTTTCTCCTCAC +
Preference number: 2 (lower is better)
Translates to: HFKTYNSVAVIAFMM*YNHDHYLVPELSPH
Trigger: GTGAGGAGAAAGTTCTGGAACTAGATAGTGGTCATGGTTATACAACATCATAAATGCAATTACTGCCACTGAATTGTATGTTTTAAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR CCA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTATCATTTCTTATGCCCTaGGTTATCATCTTCAGTAGA +
Preference number: 2 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVSFLMP*VIIFSR
Trigger: TCTACTGAAGATGATAACCCAGGGCATAAGAAATGA...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR CCA 72 bp GGGATGAAGAGATGGCCTGAGGAAGTCCTCTCCCCCTaGCCACTAAGGGACAGTCAATCAGCTGCTAACCCC +
Preference number: 3 (lower is better)
Translates to: GMKRWPEEVLSP*PLRDSQSAANP
Trigger: GGGGTTAGCAGCTGATTGACTGTCCCTTAGTGGCCAGGGGGAGAGGACTTCCTCAGGCCATCTCTTCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR CAA 90 bp GCCTCTAGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAAGAGGGGTGGTTCACTaGGAGTGCCTGAACATGATC +
Preference number: 3 (lower is better)
Translates to: ASSFSPRGKSKAGLSSVPRGVVH*ECLNMI
Trigger: GATCATGTTCAGGCACTCCAAGTGAACCACCCCTCT...TGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCTAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR GCA 72 bp ACAGCTGTTGGGAGGACAGCAGCGATAACAGATAGGTaGCCTGTAGCGATGGCCTCCAACGGCTACCTACAC +
Preference number: 3 (lower is better)
Translates to: TAVGRTAAITDR*PVAMASNGYLH
Trigger: GTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR CAA 90 bp GCCTCTAGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCACGACAGGGAGAAGCCTaGGCCAACAGAACCATTAAT +
Preference number: 3 (lower is better)
Translates to: ASSFSPRGKSKAGLSSVPRQGEA*ANRTIN
Trigger: ATTAATGGTTCTGTTGGCCAAGGCTTCTCCCTGTCG...TGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCTAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR GCA 72 bp GTAAGGGGTGAACCAAGAGGGGTGGTTCACTTGGAGTaGCTGAACATGATCCTTCACCGACAGGGAGAAGCC +
Preference number: 3 (lower is better)
Translates to: VRGEPRGVVHLE*LNMILHRQGEA
Trigger: GGCTTCTCCCTGTCGGTGAAGGATCATGTTCAGGCACTCCAAGTGAACCACCCCTCTTGGTTCACCCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CCA 72 bp CGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTaGTCAGCTGTTTGCCAACCCAGGAGTTGGGTAAAG +
Preference number: 3 (lower is better)
Translates to: RPYTSKWEVMAV*SAVCQPRSWVK
Trigger: CTTTACCCAACTCCTGGGTTGGCAAACAGCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR CAA 90 bp GCCTCTAGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAAAAGCCACAGAAGAATaGGAAGTGGCAGGAAGTCTA +
Preference number: 3 (lower is better)
Translates to: ASSFSPRGKSKAGLSSVPKATEE*EVAGSL
Trigger: TAGACTTCCTGCCACTTCCAATTCTTCTGTGGCTTT...TGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCTAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR TCA 72 bp TACAACCTTGCTATAGAGTGTCCTGTGACTGCCCAGTaGTGTAGATTATGCTCCTACCCCAGGAGGGGCAGC +
Preference number: 3 (lower is better)
Translates to: YNLAIECPVTAQ*CRLCSYPRRGS
Trigger: GCTGCCCCTCCTGGGGTAGGAGCATAATCTACATCACTGGGCAGTCACAGGACACTCTATAGCAAGGTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR TCA 72 bp TTTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTaGTGGCAGTTTGGTCAGCTGTTTGCCAACCCAGGA +
Preference number: 3 (lower is better)
Translates to: FHAVGHTLPSGR*WQFGQLFANPG
Trigger: TCCTGGGTTGGCAAACAGCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR TCA 72 bp CGCAGCTTCAAAGACCTTCCATGGAGGGCGATGGGCTaGGGACAATCTTGTTCTTCACGTAAAACACAGGCC +
Preference number: 3 (lower is better)
Translates to: RSFKDLPWRAMG*GQSCSSRKTQA
Trigger: GGCCTGTGTTTTACGTGAAGAACAAGATTGTCCTCAGCCCATCGCCCTCCATGGAAGGTCTTTGAAGCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR CCA 72 bp CATCTTGCAACCTCTAAGGCATGTGCCTCCCAACCTTaGGGGCTATTGCTCTACACTGTGGGGGTTAAACAG +
Preference number: 3 (lower is better)
Translates to: HLATSKACASQP*GLLLYTVGVKQ
Trigger: CTGTTTAACCCCCACAGTGTAGAGCAATAGCCCCCAAGGTTGGGAGGCACATGCCTTAGAGGTTGCAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR CAA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCAGTCTGCTCCCTTCATTaGCGTAAGAAATGTGATTCA +
Preference number: 3 (lower is better)
Translates to: AITDRCPVAMASNGYLHPVCSLH*RKKCDS
Trigger: TGAATCACATTTCTTACGCAAATGAAGGGAGCAGAC...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR CAA 90 bp CTAAGGCATGTGCCTCCCAACCTTGGGGGCTATTGCTCTACACTGTGGGGGTTACATCTGTGTGTTCATTaGTCCAACATCTTTCTCCCC +
Preference number: 3 (lower is better)
Translates to: LRHVPPNLGGYCSTLWGLHLCVH*SNIFLP
Trigger: GGGGAGAAAGATGTTGGACAAATGAACACACAGATG...TAACCCCCACAGTGTAGAGCAATAGCCCCCAAGGTTGGGAGGCACATGCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR GCA 72 bp TCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCTGTTTaGCAACCCAGGAGTTGGGTAAAGGTTGGTAAGAGA +
Preference number: 3 (lower is better)
Translates to: SKWEVMAVWSAV*QPRSWVKVGKR
Trigger: TCTCTTACCAACCTTTACCCAACTCCTGGGTTGGCAAACAGCTGACCAAACTGCCATCACCTCCCACTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR GCA 72 bp AGGATGCAGAAGGAACATCTGGGCTCAGCTATTTCATaGTGTCGGCCATACACTTCCAAGTGGGAGGTGATG +
Preference number: 3 (lower is better)
Translates to: RMQKEHLGSAIS*CRPYTSKWEVM
Trigger: CATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR CAA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCCCAACAGCAGGAGTGTaGCAGATTTTATCAGCTTCT +
Preference number: 3 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSPTAGV*QILSAS
Trigger: AGAAGCTGATAAAATCTGCAACACTCCTGCTGTTGG...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CCA 72 bp TCAGCTATTTCATGCTGTCGGCCATACACTTCCAAGTaGGAGGTGATGGCAGTTTGGTCAGCTGTTTGCCAA +
Preference number: 3 (lower is better)
Translates to: SAISCCRPYTSK*EVMAVWSAVCQ
Trigger: TTGGCAAACAGCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAAATAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CCA 72 bp AACGTCGCAGCTTCAAAGACCTTCCATGGAGGGCGATaGGCTGAGGACAATCTTGTTCTTCACGTAAAACAC +
Preference number: 3 (lower is better)
Translates to: NVAASKTFHGGR*AEDNLVLHVKH
Trigger: GTGTTTTACGTGAAGAACAAGATTGTCCTCAGCCCATCGCCCTCCATGGAAGGTCTTTGAAGCTGCGACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR CAA 90 bp AAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATGAGCCACCCGAGGCCTaGAGGGGCCCTTTCAGAACC +
Preference number: 3 (lower is better)
Translates to: KFQTLFTGMLKSKLHVPYEPPEA*RGPFRT
Trigger: GGTTCTGAAAGGGCCCCTCAAGGCCTCGGGTGGCTC...ATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR TCA 72 bp ACCTCGGTGTGGTTTAAGAGCAAGAGAAGGGCCAAGTaGACCCAGGTTGGGATAACAAATGAGACAAGAGTC +
Preference number: 3 (lower is better)
Translates to: TSVWFKSKRRAK*TQVGITNETRV
Trigger: GACTCTTGTCTCATTTGTTATCCCAACCTGGGTTCACTTGGCCCTTCTCTTGCTCTTAAACCACACCGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR GCA 72 bp ATTAGTGGGATTGAGAAAGGGCTGCAGGTGTCAAACTaGATCCTCTTTGCCAGACCCCAGAACCTCAAAACA +
Preference number: 3 (lower is better)
Translates to: ISGIEKGLQVSN*ILFARPQNLKT
Trigger: TGTTTTGAGGTTCTGGGGTCTGGCAAAGAGGATGCAGTTTGACACCTGCAGCCCTTTCTCAATCCCACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CCA 72 bp CTCCTCTGCTTTACCAAGGCCCAGTATCCCAGACACTaGCCACTTGCTTTTTCATATCCTTTCCTGAGGTTT +
Preference number: 3 (lower is better)
Translates to: LLCFTKAQYPRH*PLAFSYPFLRF
Trigger: AAACCTCAGGAAAGGATATGAAAAAGCAAGTGGCCAGTGTCTGGGATACTGGGCCTTGGTAAAGCAGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CCA 72 bp ACAGAAGGCAGCAGCTATTTGATTCTAGTCAGTTGTTaGCCTTCTGGAAATGTGGGTGCAGTGCTGTCAGAC +
Preference number: 3 (lower is better)
Translates to: TEGSSYLILVSC*PSGNVGAVLSD
Trigger: GTCTGACAGCACTGCACCCACATTTCCAGAAGGCCAACAACTGACTAGAATCAAATAGCTGCTGCCTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR CAA 90 bp CTGAAACCTGCTATTCTTGAGCTGGGATACCTGGAGTGGGATGAAGAGATGGCCTCACAACATACTTTTTaGCCTTCCTGGCACTTATCA +
Preference number: 3 (lower is better)
Translates to: LKPAILELGYLEWDEEMASQHTF*PSWHLS
Trigger: TGATAAGTGCCAGGAAGGCAAAAAAGTATGTTGTGA...GGCCATCTCTTCATCCCACTCCAGGTATCCCAGCTCAAGAATAGCAGGTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR CCA 72 bp TCAAAACAAGCAGTAAAACAGAGAATAAGAGGACTGTaGGTGTGCCCTCCTCTGCTTTACCAAGGCCCAGTA +
Preference number: 3 (lower is better)
Translates to: SKQAVKQRIRGL*VCPPLLYQGPV
Trigger: TACTGGGCCTTGGTAAAGCAGAGGAGGGCACACCCACAGTCCTCTTATTCTCTGTTTTACTGCTTGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CCA 72 bp CAGCAGCTATTTGATTCTAGTCAGTTGTTGGCCTTCTaGAAATGTGGGTGCAGTGCTGTCAGACCTTCCTAT +
Preference number: 3 (lower is better)
Translates to: QQLFDSSQLLAF*KCGCSAVRPSY
Trigger: ATAGGAAGGTCTGACAGCACTGCACCCACATTTCCAGAAGGCCAACAACTGACTAGAATCAAATAGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR CAA 90 bp TTCCAAGCATTGGTGAACACAATGGTGGGGCTAATGCAGAAAAGAGTATCATTTCAAACTGCATCCTCTTaGCCAGACCCCAGAACCTCA +
Preference number: 3 (lower is better)
Translates to: FQALVNTMVGLMQKRVSFQTASS*PDPRTS
Trigger: TGAGGTTCTGGGGTCTGGCAAAGAGGATGCAGTTTG...AAATGATACTCTTTTCTGCATTAGCCCCACCATTGTGTTCACCAATGCTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR CAA 90 bp CTGAAACCTGCTATTCTTGAGCTGGGATACCTGGAGTGGGATGAAGAGATGGCCAGGATCTTGACTGACTaGTTCATTCCTAATTTCTCA +
Preference number: 3 (lower is better)
Translates to: LKPAILELGYLEWDEEMARILTD*FIPNFS
Trigger: TGAGAAATTAGGAATGAACAAGTCAGTCAAGATCCT...GGCCATCTCTTCATCCCACTCCAGGTATCCCAGCTCAAGAATAGCAGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR GCA 72 bp TGCCTTCCTGGCACTTATCACAACTGGCAGTCATCTTaGTCATCTGTGTGTTCATTTGTCCAACATCTTTCT +
Preference number: 3 (lower is better)
Translates to: CLPGTYHNWQSS*SSVCSFVQHLS
Trigger: AGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGACTGCCAGTTGTGATAAGTGCCAGGAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR CAA 90 bp TTCCAAGCATTGGTGAACACAATGGTGGGGCTAATGCAGAAAAGAGTATCATTTAAGACATTAGTGGGATaGAGAAAGGGCTGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: FQALVNTMVGLMQKRVSFKTLVG*RKGCRC
Trigger: ACACCTGCAGCCCTTTCTCAATCCCACTAATGTCTT...AAATGATACTCTTTTCTGCATTAGCCCCACCATTGTGTTCACCAATGCTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CCA 72 bp GTAAGAAATGTGATTCACTCCAATAAAACTGGCTATTaGCAGAGGGGAATCGAACGTCTGACTTGTGAGTCT +
Preference number: 3 (lower is better)
Translates to: VRNVIHSNKTGY*QRGIERLTCES
Trigger: AGACTCACAAGTCAGACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATTGGAGTGAATCACATTTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR TCA 72 bp GTTAAACAGGAAAAAGACCATCACGATTTCCAAATCTaGGTCTGGGTCCTGTTCCCTGATGTATCTTCTTCA +
Preference number: 3 (lower is better)
Translates to: VKQEKDHHDFQI*VWVLFPDVSSS
Trigger: TGAAGAAGATACATCAGGGAACAGGACCCAGACTCAGATTTGGAAATCGTGATGGTCTTTTTCCTGTTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR CAA 90 bp CAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTGGCCCTTTCAGAACCTaGGGTCTGAAGTCATTTCTT +
Preference number: 3 (lower is better)
Translates to: QTLFTGMLKSKLHVPYYCGPFRT*GLKSFL
Trigger: AAGAAATGACTTCAGACCCAAGGTTCTGAAAGGGCC...ACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR-3UTR CAA 90 bp ATTGAAGATTTGAAGGGTGGATACTTCATCTACAGAAGGCAGCAGCTATTTGATCAACTGGCAGTCATCTaGCTCATCTGTGTGTTCATT +
Preference number: 3 (lower is better)
Translates to: IEDLKGGYFIYRRQQLFDQLAVI*LICVFI
Trigger: AATGAACACACAGATGAGCAAGATGACTGCCAGTTG...ATCAAATAGCTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR CAA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAATTTTTCCCTGCTGTTTaGTCCTCCATTCTTCCAGCA +
Preference number: 3 (lower is better)
Translates to: TFQARIRGNNLRLVRILKFFPAV*SSILPA
Trigger: TGCTGGAAGAATGGAGGACAAAACAGCAGGGAAAAA...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR TCA 72 bp AGTGGATCTGTATTGGAACTTGGGAACAATAGAGATTaGAGATTTGAAGGGTGGATACTTCATCTACAGAAG +
Preference number: 3 (lower is better)
Translates to: SGSVLELGNNRD*RFEGWILHLQK
Trigger: CTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAATCTCTATTGTTCCCAAGTTCCAATACAGATCCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR CCA 72 bp TGGAAGACATTTATATTACCTCTGTATTCAGCTCATTaGACTAGCATCTTTCATGGTGTGAGACTTTCTCAT +
Preference number: 3 (lower is better)
Translates to: WKTFILPLYSAH*TSIFHGVRLSH
Trigger: ATGAGAAAGTCTCACACCATGAAAGATGCTAGTCCAATGAGCTGAATACAGAGGTAATATAAATGTCTTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR-3UTR CAA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAAGTAACACAAAGAACTTaGGTCTATGAAGGACACAAA +
Preference number: 3 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQVTQRT*VYEGHK
Trigger: TTTGTGTCCTTCATAGACCAAAGTTCTTTGTGTTAC...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR-3UTR CAA 90 bp AAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATACAAGTATAAAGGGCTaGCATTTTATTTCCACAAGG +
Preference number: 3 (lower is better)
Translates to: KFQTLFTGMLKSKLHVPYTSIKG*HFISTR
Trigger: CCTTGTGGAAATAAAATGCAAGCCCTTTATACTTGT...ATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR-3UTR CAA 90 bp GGTATTTCCAGAGTGTTGAATACTATGATTATGTTCAGCAGGGACTATAAACTTATAGAGATTGAAGATTaGAAGGGTGGATACTTCATC +
Preference number: 3 (lower is better)
Translates to: GISRVLNTMIMFSRDYKLIEIED*KGGYFI
Trigger: GATGAAGTATCCACCCTTCAAATCTTCAATCTCTAT...AAGTTTATAGTCCCTGCTGAACATAATCATAGTATTCAACACTCTGGAAATACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR-3UTR CAA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAAGATCTGTATTGGAACTaGGGAACAATAGAGATTGAA +
Preference number: 3 (lower is better)
Translates to: TFQARIRGNNLRLVRILKDLYWN*GTIEIE
Trigger: TTCAATCTCTATTGTTCCCAAGTTCCAATACAGATC...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR GCA 72 bp GGTAATAAGAAAAGTTCCAAACATTATTCACTGGGATaGTCAAAAGTAAGCTACATGTGCCATATTACTGTA +
Preference number: 3 (lower is better)
Translates to: GNKKSSKHYSLG*SKVSYMCHITV
Trigger: TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTTCTTATTACC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCACGTCCAGGTGCGGCGTaGGGATGCGGGAGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPRPGAA*GCGSRG
Trigger: TCCACGGCTCCCGCATCCGCACGCCGCACCTGGACG...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCGGTGCGGCGTGCGGATaGGGGAGCCGTGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIGAACG*GSRGSR
Trigger: TCGGCTTCCACGGCTCCCGCATCCGCACGCCGCACC...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp AGGGGTGAACCAAGAGGGGTGGTTCACTTGGAGTGCCTGAACATGATCCTTCACGCCAGCGCGTCCAGGTaGGGCGTGCGGATGCGGGAG +
Preference number: 4 (lower is better)
Translates to: RGEPRGVVHLECLNMILHASASR*GVRMRE
Trigger: CTCCCGCATCCGCACGCCGCACCTGGACGCGCTGGC...GTGAAGGATCATGTTCAGGCACTCCAAGTGAACCACCCCTCTTGGTTCACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GATGCCACAGAGCCAAGCATCTCCCACCCAGCCCTCTTAGTGTCTACCATGAACCGGCCAGTGAGCAGCTaGCTCCGCGACGGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: DATEPSISHPALLVSTMNRPVSS*LRDGVH
Trigger: GTGCACGCCGTCGCGGAGCCAGCTGCTCACTGGCCG...GTTCATGGTAGACACTAAGAGGGCTGGGTGGGAGATGCTTGGCTCTGTGGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GTAGCGATGGCCTCCAACGGCTACCTACACCCAGCCCTGGGATTCGGAGGATGCCCTTTGCTGGAGCCATaGTGTTCCTGGGACACGGTG +
Preference number: 4 (lower is better)
Translates to: VAMASNGYLHPALGFGGCPLLEP*CSWDTV
Trigger: CACCGTGTCCCAGGAACAGCATGGCTCCAGCAAAGG...GCATCCTCCGAATCCCAGGGCTGGGTGTAGGTAGCCGTTGGAGGCCATCGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GATGCCACAGAGCCAAGCATCTCCCACCCAGCCCTCTTAGTGTCTACCATGAACCGGTCCCAGCGCCTGTaGCGCCACCAGCCCCTTGTA +
Preference number: 4 (lower is better)
Translates to: DATEPSISHPALLVSTMNRSQRL*RHQPLV
Trigger: TACAAGGGGCTGGTGGCGCCACAGGCGCTGGGACCG...GTTCATGGTAGACACTAAGAGGGCTGGGTGGGAGATGCTTGGCTCTGTGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCACACCCCAGTGGCCTTaGGATCACAGCGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: AVGRTAAITDRCPVAMASTPQWP*DHSGGP
Trigger: AGGACCCCCGCTGTGATCCCAAGGCCACTGGGGTGT...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GATGCCACAGAGCCAAGCATCTCCCACCCAGCCCTCTTAGTGTCTACCATGAACGGCCCCACACCCCAGTaGCCTTGGGATCACAGCGGG +
Preference number: 4 (lower is better)
Translates to: DATEPSISHPALLVSTMNGPTPQ*PWDHSG
Trigger: CCCGCTGTGATCCCAAGGCCACTGGGGTGTGGGGCC...GTTCATGGTAGACACTAAGAGGGCTGGGTGGGAGATGCTTGGCTCTGTGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp AGGGGTGAACCAAGAGGGGTGGTTCACTTGGAGTGCCTGAACATGATCCTTCACGGCTCCGCGACGGCGTaGACAGCGGCTGCGTGTAGT +
Preference number: 4 (lower is better)
Translates to: RGEPRGVVHLECLNMILHGSATA*TAAACS
Trigger: ACTACACGCAGCCGCTGTGCACGCCGTCGCGGAGCC...GTGAAGGATCATGTTCAGGCACTCCAAGTGAACCACCCCTCTTGGTTCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CAA 72 bp CCTCTTCTGCCACTTCTGCAGGAGCCACCCGAGGCCTaGAGGGGCCCTTTCAGAACCTTGGGTCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PLLPLLQEPPEA*RGPFRTLGLKS
Trigger: TGACTTCAGACCCAAGGTTCTGAAAGGGCCCCTCAAGGCCTCGGGTGGCTCCTGCAGAAGTGGCAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp AAGTCCACTGGGTGCAGAACATCCCCCACTGTGCCTGAAAACCAAGGAACTAGATCTGGTAGCGGCCAGTaGGCAGCTGGCTCCGCGACG +
Preference number: 4 (lower is better)
Translates to: KSTGCRTSPTVPENQGTRSGSGQ*AAGSAT
Trigger: CGTCGCGGAGCCAGCTGCTCACTGGCCGCTACCAGA...TCTAGTTCCTTGGTTTTCAGGCACAGTGGGGGATGTTCTGCACCCAGTGGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GTAGCGATGGCCTCCAACGGCTACCTACACCCAGCCCTGGGATTCGGAGGATGCCTGCAGGTGTCAAACTaGATCCTCTTTGCCAGACCC +
Preference number: 4 (lower is better)
Translates to: VAMASNGYLHPALGFGGCLQVSN*ILFARP
Trigger: GGGTCTGGCAAAGAGGATGCAGTTTGACACCTGCAG...GCATCCTCCGAATCCCAGGGCTGGGTGTAGGTAGCCGTTGGAGGCCATCGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp AGGGGTGAACCAAGAGGGGTGGTTCACTTGGAGTGCCTGAACATGATCCTTCACCGGATGCGGGAGCCGTaGAAGCCGACGTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RGEPRGVVHLECLNMILHRMREP*KPTSFQ
Trigger: CTGGAACGACGTCGGCTTCCACGGCTCCCGCATCCG...GTGAAGGATCATGTTCAGGCACTCCAAGTGAACCACCCCTCTTGGTTCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GTAGCGATGGCCTCCAACGGCTACCTACACCCAGCCCTGGGATTCGGAGGATGCGGCTCAGCTATTTCATaGTGTCGGCCATACACTTCC +
Preference number: 4 (lower is better)
Translates to: VAMASNGYLHPALGFGGCGSAIS*CRPYTS
Trigger: GGAAGTGTATGGCCGACAGCATGAAATAGCTGAGCC...GCATCCTCCGAATCCCAGGGCTGGGTGTAGGTAGCCGTTGGAGGCCATCGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCGCGATAACAGATAGGTaGCCTGTAGCGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AVGRTAAITDRCPVAMASAITDR*PVAMAS
Trigger: GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCCTGGGAGTTAGAGGCTaGAGTGAGCCGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: AVGRTAAITDRCPVAMASLGVRG*SEPRSH
Trigger: GTGTGATCTCGGCTCACTGCAGCCTCTAACTCCCAG...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCCCAGAGGAACACAGCTaGGCTGACAGGGCCAGATTA +
Preference number: 4 (lower is better)
Translates to: AVGRTAAITDRCPVAMASPEEHS*ADRARL
Trigger: TAATCTGGCCCTGTCAGCCCAGCTGTGTTCCTCTGG...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GCCTCTAGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAACCTACACCCAGCCCTaGGATTCGGAGGATGCAGAA +
Preference number: 4 (lower is better)
Translates to: ASSFSPRGKSKAGLSSVPTYTQP*DSEDAE
Trigger: TTCTGCATCCTCCGAATCCCAGGGCTGGGTGTAGGT...TGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCTAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp TCTGAGTCTGGGTCCTGTTCCCTGATGTATCTTCTTCACATCAGCCAGCTCTATTCTGGTAGCGGCCAGTaGGCAGCTGGCTCCGCGACG +
Preference number: 4 (lower is better)
Translates to: SESGSCSLMYLLHISQLYSGSGQ*AAGSAT
Trigger: CGTCGCGGAGCCAGCTGCTCACTGGCCGCTACCAGA...ATAGAGCTGGCTGATGTGAAGAAGATACATCAGGGAACAGGACCCAGACTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCCCCCCTGCCAAAGTCTaGCCTCCGTTATCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: AVGRTAAITDRCPVAMASPPAKV*PPLSVE
Trigger: TTCTACAGATAACGGAGGGCAGACTTTGGCAGGGGG...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp AAGTCCACTGGGTGCAGAACATCCCCCACTGTGCCTGAAAACCAAGGAACTAGAACAGCGGGGGTCCTGTaGAGGGAAGTACACGGGGAC +
Preference number: 4 (lower is better)
Translates to: KSTGCRTSPTVPENQGTRTAGVL*REVHGD
Trigger: GTCCCCGTGTACTTCCCTGCACAGGACCCCCGCTGT...TCTAGTTCCTTGGTTTTCAGGCACAGTGGGGGATGTTCTGCACCCAGTGGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCCTGGGATTCGGAGGATaGAGAAGGAACATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AVGRTAAITDRCPVAMASLGFGG*RRNIWA
Trigger: AGCCCAGATGTTCCTTCTGCATCCTCCGAATCCCAG...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCAGCAGCAGCTCAATTCTaGGGGATGGGCTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPAAAQF*GMGFLH
Trigger: GTGAAGGAAGCCCATCCCCCAGAATTGAGCTGCTGC...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCTTTGGGTGCCTGAGGTaGGAGAATCACTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AVGRTAAITDRCPVAMASFGCLR*ENHLSP
Trigger: TGGGCTCAAGTGATTCTCCCACCTCAGGCACCCAAA...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCTATTCCTCAGGGACCTaGAGGGGCTCATGCACAGAC +
Preference number: 4 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIYSSGT*RGSCTD
Trigger: GTCTGTGCATGAGCCCCTTCAGGTCCCTGAGGAATA...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCGGTGGGAGAATCACTTaGGCCCAGGAGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIGGRIT*AQEFEA
Trigger: AGCCTCAAACTCCTGGGCTCAAGTGATTCTCCCACC...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGGCCAGCGCGTCCAGGTaGGGCGTGCGGATGCGGGAG +
Preference number: 4 (lower is better)
Translates to: VFPITRDLKPAILELGYLASASR*GVRMRE
Trigger: CTCCCGCATCCGCACGCCGCACCTGGACGCGCTGGC...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCTTCTTCACGCCCTTCTaGTTCAGCAAGGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIFFTPF*FSKGLA
Trigger: GGCAAGCCCCTTGCTGAAGCAGAAGGGCGTGAAGAA...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCATTGAAGTCCACTGGGTaGAGAACATCCCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPLKSTG*RTSPTV
Trigger: CACAGTGGGGGATGTTCTGCACCCAGTGGACTTCAA...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp ATGAAGAGATGGCCTGAGGAAGTCCTCTCCCCCTGGCCACTAAGGGACAGTCAACCAGAGGAACACAGCTaGGCTGACAGGGCCAGATTA +
Preference number: 4 (lower is better)
Translates to: MKRWPEEVLSPWPLRDSQPEEHS*ADRARL
Trigger: TAATCTGGCCCTGTCAGCCCAGCTGTGTTCCTCTGG...TTGACTGTCCCTTAGTGGCCAGGGGGAGAGGACTTCCTCAGGCCATCTCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCAGAGCCAGAGGGTCTTaGTTGGTGGGTCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIRARGS*LVGLMR
Trigger: CCTCATCAGACCCACCAACCAAGACCCTCTGGCTCT...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp GCCTCTAGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAGTACACGGGGACTaGGTGTTTATGGTAGAACTG +
Preference number: 4 (lower is better)
Translates to: ASSFSPRGKSKAGLSSVPEVHGD*VFMVEL
Trigger: CAGTTCTACCATAAACACTCAGTCCCCGTGTACTTC...TGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCTAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCAAAGAGAAGGGCCAAGTaGACCCAGGTTGGGATAACA +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPKRRAK*TQVGIT
Trigger: TGTTATCCCAACCTGGGTTCACTTGGCCCTTCTCTT...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp CTGAAACCTGCTATTCTTGAGCTGGGATACCTGGAGTGGGATGAAGAGATGGCCGATGAAGAGATGGCCTaGGGAAGTCCTCTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: LKPAILELGYLEWDEEMADEEMA*GSPLPL
Trigger: CAGGGGGAGAGGACTTCCTCAGGCCATCTCTTCATC...GGCCATCTCTTCATCCCACTCCAGGTATCCCAGCTCAAGAATAGCAGGTTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp ATGAAGAGATGGCCTGAGGAAGTCCTCTCCCCCTGGCCACTAAGGGACAGTCAAATACCTGGAGTGGGATaGAGAGATGGCCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: MKRWPEEVLSPWPLRDSQIPGVG*RDGLRK
Trigger: CTTCCTCAGGCCATCTCTTCATCCCACTCCAGGTAT...TTGACTGTCCCTTAGTGGCCAGGGGGAGAGGACTTCCTCAGGCCATCTCTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp ATGAAGAGATGGCCTGAGGAAGTCCTCTCCCCCTGGCCACTAAGGGACAGTCAACCCCCTGCCAAAGTCTaGCCTCCGTTATCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: MKRWPEEVLSPWPLRDSQPPAKV*PPLSVE
Trigger: TTCTACAGATAACGGAGGGCAGACTTTGGCAGGGGG...TTGACTGTCCCTTAGTGGCCAGGGGGAGAGGACTTCCTCAGGCCATCTCTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp TTTTGCCTTCCTGGCACTTATCACAACTGGCAGTCATCTTGCTCATCTGTGTGTCGGATGCGGGAGCCGTaGAAGCCGACGTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: FCLPGTYHNWQSSCSSVCRMREP*KPTSFQ
Trigger: CTGGAACGACGTCGGCTTCCACGGCTCCCGCATCCG...ACACACAGATGAGCAAGATGACTGCCAGTTGTGATAAGTGCCAGGAAGGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGCGGCCAGTGAGCAGCTaGCTCCGCGACGGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: VFPITRDLKPAILELGYLRPVSS*LRDGVH
Trigger: GTGCACGCCGTCGCGGAGCCAGCTGCTCACTGGCCG...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp GTAGCGATGGCCTCCAACGGCTACCTACACCCAGCCCTGGGATTCGGAGGATGCAAACAGAGGCTTCTCTaGTGGATGGTTAGTTATGAG +
Preference number: 4 (lower is better)
Translates to: VAMASNGYLHPALGFGGCKQRLL*WMVSYE
Trigger: CTCATAACTAACCATCCACCAGAGAAGCCTCTGTTT...GCATCCTCCGAATCCCAGGGCTGGGTGTAGGTAGCCGTTGGAGGCCATCGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCCATTGGTGTGTCCCCTaGCCAGCTTCACGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSHWCVP*PASRVL
Trigger: CAACACTCGTGAAGCTGGCCAGGGGACACACCAATG...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCATCTCCTCACCCCAAATaGAAGCCCCATACATATGGC +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPSPHPK*KPHTYG
Trigger: GCCATATGTATGGGGCTTCCATTTGGGGTGAGGAGA...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCAGCCTGGGTAGCCCGTaGGGAGTTTCCAATTTCCAT +
Preference number: 4 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSSLGSP*GVSNFH
Trigger: ATGGAAATTGGAAACTCCTCACGGGCTACCCAGGCT...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCGGGACAGGAGCTTTGTaGCGATGTGAGGATATTCTC +
Preference number: 4 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIGTGAL*RCEDIL
Trigger: GAGAATATCCTCACATCGTCACAAAGCTCCTGTCCC...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCCCTGTGACTGCCCAGTaGTGTAGATTATGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIPVTAQ*CRLCSY
Trigger: GTAGGAGCATAATCTACATCACTGGGCAGTCACAGG...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp CTAAGGCATGTGCCTCCCAACCTTGGGGGCTATTGCTCTACACTGTGGGGGTTAGTTGAGCGGCCTGGCTaGACACTTCTTCTATCCATT +
Preference number: 4 (lower is better)
Translates to: LRHVPPNLGGYCSTLWGLVERPG*TLLLSI
Trigger: AATGGATAGAAGAAGTGTTCAGCCAGGCCGCTCAAC...TAACCCCCACAGTGTAGAGCAATAGCCCCCAAGGTTGGGAGGCACATGCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp GGAGGATGCAGAAGGAACATCTGGGCTCAGCTATTTCATGCTGTCGGCCATACACCACCTCTAGACACATaGTCCAGCCAACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GGCRRNIWAQLFHAVGHTPPLDT*SSQQQE
Trigger: CTCCTGCTGTTGGCTGGAGCATGTGTCTAGAGGTGG...TGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCATCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCAAAGCCACAGTCATGGTaGAGGCATTTTGCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPKPQSW*RHFAVD
Trigger: GTCAACAGCAAAATGCCTGCACCATGACTGTGGCTT...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GATGCCACAGAGCCAAGCATCTCCCACCCAGCCCTCTTAGTGTCTACCATGAACGTTTGGTCAGCTGTTTaGCAACCCAGGAGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: DATEPSISHPALLVSTMNVWSAV*QPRSWV
Trigger: TACCCAACTCCTGGGTTGGCAAACAGCTGACCAAAC...GTTCATGGTAGACACTAAGAGGGCTGGGTGGGAGATGCTTGGCTCTGTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCAGAACATCCCCCACTGTaGCTGAAAACCAAGGAACTA +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPEHPPL*LKTKEL
Trigger: TAGTTCCTTGGTTTTCAGGCACAGTGGGGGATGTTC...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GCCTCTAGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGGCTTCTCTGGTGGATaGTTAGTTATGAGGGCTATA +
Preference number: 4 (lower is better)
Translates to: ASSFSPRGKSKAGLSSVPGFSGG*LVMRAI
Trigger: TATAGCCCTCATAACTAACCATCCACCAGAGAAGCC...TGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCTAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GATGCCACAGAGCCAAGCATCTCCCACCCAGCCCTCTTAGTGTCTACCATGAACCAGAGGCTTCTCTGGTaGATGGTTAGTTATGAGGGC +
Preference number: 4 (lower is better)
Translates to: DATEPSISHPALLVSTMNQRLLW*MVSYEG
Trigger: GCCCTCATAACTAACCATCCACCAGAGAAGCCTCTG...GTTCATGGTAGACACTAAGAGGGCTGGGTGGGAGATGCTTGGCTCTGTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCAGCCAGTCAGAGATGTaGATGAGCTCCCGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSSQSEM*MSSRFF
Trigger: GAAGAACCGGGAGCTCATCCACATCTCTGACTGGCT...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp AGGGGTGAACCAAGAGGGGTGGTTCACTTGGAGTGCCTGAACATGATCCTTCACCAGCTTCACGAGTGTTaGCAGCCAGTCAGAGATGTG +
Preference number: 4 (lower is better)
Translates to: RGEPRGVVHLECLNMILHQLHEC*QPVRDV
Trigger: CACATCTCTGACTGGCTGCCAACACTCGTGAAGCTG...GTGAAGGATCATGTTCAGGCACTCCAAGTGAACCACCCCTCTTGGTTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp AAGTCCACTGGGTGCAGAACATCCCCCACTGTGCCTGAAAACCAAGGAACTAGAGAGCCATGCTGTTCCTaGGACACGGTGAAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: KSTGCRTSPTVPENQGTREPCCS*DTVKSP
Trigger: TGGACTCTTCACCGTGTCCCAGGAACAGCATGGCTC...TCTAGTTCCTTGGTTTTCAGGCACAGTGGGGGATGTTCTGCACCCAGTGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCATGCCAACCCAGGAGTTaGGTAAAGGTTGGTAAGAGA +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPCQPRS*VKVGKR
Trigger: TCTCTTACCAACCTTTACCCAACTCCTGGGTTGGCA...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GATGCCACAGAGCCAAGCATCTCCCACCCAGCCCTCTTAGTGTCTACCATGAACTCTTTTGAAGTCCACTaGGTGCAGAACATCCCCCAC +
Preference number: 4 (lower is better)
Translates to: DATEPSISHPALLVSTMNSFEVH*VQNIPH
Trigger: GTGGGGGATGTTCTGCACCCAGTGGACTTCAAAAGA...GTTCATGGTAGACACTAAGAGGGCTGGGTGGGAGATGCTTGGCTCTGTGGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCACAAGAGCACATCGTGTaGCATTCAGAGCGTCAATTA +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPQEHIV*HSERQL
Trigger: TAATTGACGCTCTGAATGTCACACGATGTGCTCTTG...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCATGGGCTTCCTTCACTaGTGGTTTTCCACACGTCGA +
Preference number: 4 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSMGFLH*WFSTRR
Trigger: TCGACGTGTGGAAAACCATCAGTGAAGGAAGCCCAT...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp AAGTCCACTGGGTGCAGAACATCCCCCACTGTGCCTGAAAACCAAGGAACTAGAAGTGGGTGGATCACTTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: KSTGCRTSPTVPENQGTRSGWIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAGTGATCCACCCACT...TCTAGTTCCTTGGTTTTCAGGCACAGTGGGGGATGTTCTGCACCCAGTGGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp ATGAAGAGATGGCCTGAGGAAGTCCTCTCCCCCTGGCCACTAAGGGACAGTCAACTGGGTCCTGTTCCCTaGTGTATCTTCTTCACATCA +
Preference number: 4 (lower is better)
Translates to: MKRWPEEVLSPWPLRDSQLGPVP*CIFFTS
Trigger: TGATGTGAAGAAGATACATCAGGGAACAGGACCCAG...TTGACTGTCCCTTAGTGGCCAGGGGGAGAGGACTTCCTCAGGCCATCTCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp TTTTGCCTTCCTGGCACTTATCACAACTGGCAGTCATCTTGCTCATCTGTGTGTTGGCCAGGCTGGTCTTaGACTCCTGACCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FCLPGTYHNWQSSCSSVCWPGWS*TPDLRW
Trigger: CCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCA...ACACACAGATGAGCAAGATGACTGCCAGTTGTGATAAGTGCCAGGAAGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAAGCCAGCGCGTCCAGGTaGGGCGTGCGGATGCGGGAG +
Preference number: 4 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQASASR*GVRMRE
Trigger: CTCCCGCATCCGCACGCCGCACCTGGACGCGCTGGC...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp AAGTCCACTGGGTGCAGAACATCCCCCACTGTGCCTGAAAACCAAGGAACTAGACCAGTTATTACCCCCTaGCAAAGTCTGCCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: KSTGCRTSPTVPENQGTRPVITP*QSLPSV
Trigger: AACGGAGGGCAGACTTTGGCAGGGGGTAATAACTGG...TCTAGTTCCTTGGTTTTCAGGCACAGTGGGGGATGTTCTGCACCCAGTGGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCGTGGTTCACTTGGAGTaGCTGAACATGATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIVVHLE*LNMILH
Trigger: GTGAAGGATCATGTTCAGGCACTCCAAGTGAACCAC...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCAGGACGCTACAACCTTaGTATAGAGTGTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIRTLQP*YRVSCD
Trigger: GTCACAGGACACTCTATAGCAAGGTTGTAGCGTCCT...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp CTAAGGCATGTGCCTCCCAACCTTGGGGGCTATTGCTCTACACTGTGGGGGTTAGAGGTTGAAAACCATTaGACTAGGTCATTCCACCCG +
Preference number: 4 (lower is better)
Translates to: LRHVPPNLGGYCSTLWGLEVENH*TRSFHP
Trigger: CGGGTGGAATGACCTAGTGCAATGGTTTTCAACCTC...TAACCCCCACAGTGTAGAGCAATAGCCCCCAAGGTTGGGAGGCACATGCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAACGGATGCGGGAGCCGTaGAAGCCGACGTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKRMREP*KPTSFQ
Trigger: CTGGAACGACGTCGGCTTCCACGGCTCCCGCATCCG...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp CTAAGGCATGTGCCTCCCAACCTTGGGGGCTATTGCTCTACACTGTGGGGGTTACAGGGCCAGATTATTTaGTGCTGTAAACCTGTACGG +
Preference number: 4 (lower is better)
Translates to: LRHVPPNLGGYCSTLWGLQGQII*CCKPVR
Trigger: CCGTACAGGTTTACAGCACCAAATAATCTGGCCCTG...TAACCCCCACAGTGTAGAGCAATAGCCCCCAAGGTTGGGAGGCACATGCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCGCTTCTTTTAGGAGCTaGGGCAGGAGTTTTTCATCC +
Preference number: 4 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIASFRS*GRSFSS
Trigger: GGATGAAAAACTCCTGCCCCAGCTCCTAAAAGAAGC...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCAATTGTATTGAGACGGTaGAGGGAACCAGTAACCACA +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPIVLRR*REPVTT
Trigger: TGTGGTTACTGGTTCCCTCCACCGTCTCAATACAAT...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCCCATACACTTCCAAGTaGGAGGTGATGGCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSPYTSK*EVMAVW
Trigger: CCAAACTGCCATCACCTCCCACTTGGAAGTGTATGG...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GGAGGATGCAGAAGGAACATCTGGGCTCAGCTATTTCATGCTGTCGGCCATACAACTGGAGACAGCTGTTaGGAGGACAGCAGCGATAAC +
Preference number: 4 (lower is better)
Translates to: GGCRRNIWAQLFHAVGHTTGDSC*EDSSDN
Trigger: GTTATCGCTGCTGTCCTCCCAACAGCTGTCTCCAGT...TGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCATCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCTTTGGGAAGCTGAAGTaGGTGGATCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIFGKLK*VDHLRS
Trigger: TGACCTCAAGTGATCCACCCACTTCAGCTTCCCAAA...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp CTGAAACCTGCTATTCTTGAGCTGGGATACCTGGAGTGGGATGAAGAGATGGCCAGTGGGATGAAGAGATaGCCTGAGGAAGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LKPAILELGYLEWDEEMASGMKR*PEEVLS
Trigger: GGAGAGGACTTCCTCAGGCCATCTCTTCATCCCACT...GGCCATCTCTTCATCCCACTCCAGGTATCCCAGCTCAAGAATAGCAGGTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp TCTGAGTCTGGGTCCTGTTCCCTGATGTATCTTCTTCACATCAGCCAGCTCTATAGTCAGAGATGTGGATaGGCTCCCGGTTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: SESGSCSLMYLLHISQLYSQRCG*APGSSR
Trigger: GCGTGAAGAACCGGGAGCTCATCCACATCTCTGACT...ATAGAGCTGGCTGATGTGAAGAAGATACATCAGGGAACAGGACCCAGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp AGGGGTGAACCAAGAGGGGTGGTTCACTTGGAGTGCCTGAACATGATCCTTCACGGGGAATCGAACGTCTaGCTTGTGAGTCTAAAAGAG +
Preference number: 4 (lower is better)
Translates to: RGEPRGVVHLECLNMILHGESNV*LVSLKE
Trigger: CTCTTTTAGACTCACAAGTCAGACGTTCGATTCCCC...GTGAAGGATCATGTTCAGGCACTCCAAGTGAACCACCCCTCTTGGTTCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp CAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTGGTGCGGCGTGCGGATaGGGGAGCCGTGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: QTLFTGMLKSKLHVPYYCGAACG*GSRGSR
Trigger: TCGGCTTCCACGGCTCCCGCATCCGCACGCCGCACC...ACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp TTCAGTGAGAACTTCCTATTTCAAGTTAAGTTCCCAGCTGTCCCAAGGCTTAGGCTTCAGCAAGGGGCTTaGCACAAAGCCCACCCCTCG +
Preference number: 4 (lower is better)
Translates to: FSENFLFQVKFPAVPRLRLQQGA*HKAHPS
Trigger: CGAGGGGTGGGCTTTGTGGCAAGCCCCTTGCTGAAG...CCTAAGCCTTGGGACAGCTGGGAACTTAACTTGAAATAGGAAGTTCTCACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp AAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATCGGCCAGTGAGCAGCTaGCTCCGCGACGGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: KFQTLFTGMLKSKLHVPYRPVSS*LRDGVH
Trigger: GTGCACGCCGTCGCGGAGCCAGCTGCTCACTGGCCG...ATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp ATGAAGAGATGGCCTGAGGAAGTCCTCTCCCCCTGGCCACTAAGGGACAGTCAAGGCTTCTCTGGTGGATaGTTAGTTATGAGGGCTATA +
Preference number: 4 (lower is better)
Translates to: MKRWPEEVLSPWPLRDSQGFSGG*LVMRAI
Trigger: TATAGCCCTCATAACTAACCATCCACCAGAGAAGCC...TTGACTGTCCCTTAGTGGCCAGGGGGAGAGGACTTCCTCAGGCCATCTCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp GATGCCACAGAGCCAAGCATCTCCCACCCAGCCCTCTTAGTGTCTACCATGAACTTAGACACCTCGGTGTaGTTTAAGAGCAAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: DATEPSISHPALLVSTMNLDTSV*FKSKRR
Trigger: CCTTCTCTTGCTCTTAAACCACACCGAGGTGTCTAA...GTTCATGGTAGACACTAAGAGGGCTGGGTGGGAGATGCTTGGCTCTGTGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATGGCCCCCGGCTGCTGTaGCGGAGGAGGAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHGPRLL*RRRSQR
Trigger: TCTCTGGCTCCTCCTCCGCCACAGCAGCCGGGGGCC...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR CAA 72 bp TGCCTGAACATGATCCTTCACCGACAGGGAGAAGCCTaGGCCAACAGAACCATTAATCACTGTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: CLNMILHRQGEA*ANRTINHCLLP
Trigger: AGGGAGCAGACAGTGATTAATGGTTCTGTTGGCCAAGGCTTCTCCCTGTCGGTGAAGGATCATGTTCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATTCTGGTAGCGGCCAGTaGGCAGCTGGCTCCGCGACG +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHSGSGQ*AAGSAT
Trigger: CGTCGCGGAGCCAGCTGCTCACTGGCCGCTACCAGA...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCGCCTCCAGGATTCAGTaGGAACTTCCTATTTCAAGT +
Preference number: 4 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSASRIQ*ELPISS
Trigger: ACTTGAAATAGGAAGTTCTCACTGAATCCTGGAGGC...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCAGCATCTTTCATGGTGTaGGACTTTCTCATTTACTCA +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPASFMV*DFLIYS
Trigger: TGAGTAAATGAGAAAGTCTCACACCATGAAAGATGC...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp TCTGAGTCTGGGTCCTGTTCCCTGATGTATCTTCTTCACATCAGCCAGCTCTATTGGAGGGCGATGGGCTaGGGACAATCTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SESGSCSLMYLLHISQLYWRAMG*GQSCSS
Trigger: TGAAGAACAAGATTGTCCTCAGCCCATCGCCCTCCA...ATAGAGCTGGCTGATGTGAAGAAGATACATCAGGGAACAGGACCCAGACTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp GGTATTTCCAGAGTGTTGAATACTATGATTATGTTCAGCAGGGACTATAAACTTGGTGCGGCGTGCGGATaGGGGAGCCGTGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: GISRVLNTMIMFSRDYKLGAACG*GSRGSR
Trigger: TCGGCTTCCACGGCTCCCGCATCCGCACGCCGCACC...AAGTTTATAGTCCCTGCTGAACATAATCATAGTATTCAACACTCTGGAAATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTACGTCCAGGTGCGGCGTaGGGATGCGGGAGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVRPGAA*GCGSRG
Trigger: TCCACGGCTCCCGCATCCGCACGCCGCACCTGGACG...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp CAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTGGCTCCGCGACGGCGTaGACAGCGGCTGCGTGTAGT +
Preference number: 4 (lower is better)
Translates to: QTLFTGMLKSKLHVPYYCGSATA*TAAACS
Trigger: ACTACACGCAGCCGCTGTGCACGCCGTCGCGGAGCC...ACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp AGGGGTGAACCAAGAGGGGTGGTTCACTTGGAGTGCCTGAACATGATCCTTCACGGCCAGATTATTTGGTaGTGTAAACCTGTACGGATC +
Preference number: 4 (lower is better)
Translates to: RGEPRGVVHLECLNMILHGQIIW*CKPVRI
Trigger: GATCCGTACAGGTTTACAGCACCAAATAATCTGGCC...GTGAAGGATCATGTTCAGGCACTCCAAGTGAACCACCCCTCTTGGTTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp AGGGGTGAACCAAGAGGGGTGGTTCACTTGGAGTGCCTGAACATGATCCTTCACTTCGGGTCAATATTATaGAGCAGCTCAATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RGEPRGVVHLECLNMILHFGSIL*SSSILG
Trigger: CCCCAGAATTGAGCTGCTGCATAATATTGACCCGAA...GTGAAGGATCATGTTCAGGCACTCCAAGTGAACCACCCCTCTTGGTTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GCCTCTAGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAATTTCCATGTCTAATTaGAGCATGGACAGATGTGTT +
Preference number: 4 (lower is better)
Translates to: ASSFSPRGKSKAGLSSVPISMSN*SMDRCV
Trigger: AACACATCTGTCCATGCTGCAATTAGACATGGAAAT...TGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCTAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATCGGTCCCAGCGCCTGTaGCGCCACCAGCCCCTTGTA +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHRSQRL*RHQPLV
Trigger: TACAAGGGGCTGGTGGCGCCACAGGCGCTGGGACCG...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp ATTCACTCCAATAAAACTGGCTATTGGCAGAGGGGAATCGAACGTCTGACTTGTGAGGCTTTGTGCCATTaGTGTGTCCCCTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: IHSNKTGYWQRGIERLTCEALCH*CVPWPA
Trigger: AGCTGGCCAGGGGACACACCAATGGCACAAAGCCTC...ACAAGTCAGACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATTGGAGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp TTTTGCCTTCCTGGCACTTATCACAACTGGCAGTCATCTTGCTCATCTGTGTGTGGCCTTCTGGAAATGTaGGTGCAGTGCTGTCAGACC +
Preference number: 4 (lower is better)
Translates to: FCLPGTYHNWQSSCSSVCGLLEM*VQCCQT
Trigger: GGTCTGACAGCACTGCACCCACATTTCCAGAAGGCC...ACACACAGATGAGCAAGATGACTGCCAGTTGTGATAAGTGCCAGGAAGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCATTTTTAAAGCTGCAGTaGCATTTCCTACTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPFLKLQ*HFLLLH
Trigger: ATGAAGCAGTAGGAAATGTCACTGCAGCTTTAAAAA...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp TTCAGTGAGAACTTCCTATTTCAAGTTAAGTTCCCAGCTGTCCCAAGGCTTAGGAGTCAGAGATGTGGATaGGCTCCCGGTTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: FSENFLFQVKFPAVPRLRSQRCG*APGSSR
Trigger: GCGTGAAGAACCGGGAGCTCATCCACATCTCTGACT...CCTAAGCCTTGGGACAGCTGGGAACTTAACTTGAAATAGGAAGTTCTCACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCGGTTGGGATAACAAATaGGACAAGAGTCGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSGWDNK*DKSREK
Trigger: TTTCTCACGACTCTTGTCTCATTTGTTATCCCAACC...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCACATTTCTCTGGGTTTaGCACTCTCTGGAGCTAATA +
Preference number: 4 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSTFLWV*HSLELI
Trigger: TATTAGCTCCAGAGAGTGTCAAACCCAGAGAAATGT...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp ATTCACTCCAATAAAACTGGCTATTGGCAGAGGGGAATCGAACGTCTGACTTGTCCAGGAGGGGCAGCTTaGGAACAGAAAAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: IHSNKTGYWQRGIERLTCPGGAA*EQKSNS
Trigger: GCTGTTGCTTTTCTGTTCTCAAGCTGCCCCTCCTGG...ACAAGTCAGACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATTGGAGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCTCTTCAAAACTCTTTTaGAGTCCACTGGGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSSSKLF*SPLGAE
Trigger: TTCTGCACCCAGTGGACTTCAAAAGAGTTTTGAAGA...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp TCTGAGTCTGGGTCCTGTTCCCTGATGTATCTTCTTCACATCAGCCAGCTCTATCACGATTTCCAAATCTaGGTCTGGGTCCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SESGSCSLMYLLHISQLYHDFQI*VWVLFP
Trigger: AGGGAACAGGACCCAGACTCAGATTTGGAAATCGTG...ATAGAGCTGGCTGATGTGAAGAAGATACATCAGGGAACAGGACCCAGACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp TACAAATACAAGATTGAAATTTTCTTCCTGTACTCCAAGGGAACATCTTGCAACGGCTCCGCGACGGCGTaGACAGCGGCTGCGTGTAGT +
Preference number: 4 (lower is better)
Translates to: YKYKIEIFFLYSKGTSCNGSATA*TAAACS
Trigger: ACTACACGCAGCCGCTGTGCACGCCGTCGCGGAGCC...GTTGCAAGATGTTCCCTTGGAGTACAGGAAGAAAATTTCAATCTTGTATTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp ATTCACTCCAATAAAACTGGCTATTGGCAGAGGGGAATCGAACGTCTGACTTGTCATCCAGAGGCTTTGTaGCATTGGTGTGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: IHSNKTGYWQRGIERLTCHPEAL*HWCVPW
Trigger: CCAGGGGACACACCAATGGCACAAAGCCTCTGGATG...ACAAGTCAGACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATTGGAGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp ATTCACTCCAATAAAACTGGCTATTGGCAGAGGGGAATCGAACGTCTGACTTGTGGGTGTGCCCTCCTCTaGTTTACCAAGGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: IHSNKTGYWQRGIERLTCGCALL*FTKAQY
Trigger: ATACTGGGCCTTGGTAAAGCAGAGGAGGGCACACCC...ACAAGTCAGACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATTGGAGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp TCTGAGTCTGGGTCCTGTTCCCTGATGTATCTTCTTCACATCAGCCAGCTCTATTTCTGGAAATGTGGGTaGAGTGCTGTCAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: SESGSCSLMYLLHISQLYFWKCG*SAVRPS
Trigger: GGAAGGTCTGACAGCACTGCACCCACATTTCCAGAA...ATAGAGCTGGCTGATGTGAAGAAGATACATCAGGGAACAGGACCCAGACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp ATGAAGAGATGGCCTGAGGAAGTCCTCTCCCCCTGGCCACTAAGGGACAGTCAAGGTAACCTAAATGAGTaGAGTGGATCTGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: MKRWPEEVLSPWPLRDSQGNLNE*SGSVLE
Trigger: TTCCAATACAGATCCACTGCACTCATTTAGGTTACC...TTGACTGTCCCTTAGTGGCCAGGGGGAGAGGACTTCCTCAGGCCATCTCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCTGCCTGTTCTTGTCTTaGATAAAGTCATATGGCTTC +
Preference number: 4 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEICLFLS*IKSYGF
Trigger: GAAGCCATATGACTTTATCCAAGACAAGAACAGGCA...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp TTTTGCCTTCCTGGCACTTATCACAACTGGCAGTCATCTTGCTCATCTGTGTGTAGCCAGTCAGAGATGTaGATGAGCTCCCGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FCLPGTYHNWQSSCSSVCSQSEM*MSSRFF
Trigger: GAAGAACCGGGAGCTCATCCACATCTCTGACTGGCT...ACACACAGATGAGCAAGATGACTGCCAGTTGTGATAAGTGCCAGGAAGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp TTTTGCCTTCCTGGCACTTATCACAACTGGCAGTCATCTTGCTCATCTGTGTGTCAGCTTCACGAGTGTTaGCAGCCAGTCAGAGATGTG +
Preference number: 4 (lower is better)
Translates to: FCLPGTYHNWQSSCSSVCQLHEC*QPVRDV
Trigger: CACATCTCTGACTGGCTGCCAACACTCGTGAAGCTG...ACACACAGATGAGCAAGATGACTGCCAGTTGTGATAAGTGCCAGGAAGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAAGAGGCTTTGTGCCATTaGTGTGTCCCCTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKEALCH*CVPWPA
Trigger: AGCTGGCCAGGGGACACACCAATGGCACAAAGCCTC...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGAGAGGCTTTGTGCCATTaGTGTGTCCCCTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTREALCH*CVPWPA
Trigger: AGCTGGCCAGGGGACACACCAATGGCACAAAGCCTC...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp TTCAGTGAGAACTTCCTATTTCAAGTTAAGTTCCCAGCTGTCCCAAGGCTTAGGCCAGTAACCACAGCCTaGGTAGCCCGTGAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: FSENFLFQVKFPAVPRLRPVTTA*VAREEF
Trigger: AAACTCCTCACGGGCTACCCAGGCTGTGGTTACTGG...CCTAAGCCTTGGGACAGCTGGGAACTTAACTTGAAATAGGAAGTTCTCACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp CAAAACGTCGCAGCTTCAAAGACCTTCCATGGAGGGCGATGGGCTGAGGACAATGCAGTGGATCTGTATTaGAACTTGGGAACAATAGAG +
Preference number: 4 (lower is better)
Translates to: QNVAASKTFHGGRWAEDNAVDLY*NLGTIE
Trigger: CTCTATTGTTCCCAAGTTCCAATACAGATCCACTGC...ATTGTCCTCAGCCCATCGCCCTCCATGGAAGGTCTTTGAAGCTGCGACGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGTATTCCTCAGGGACCTaGAGGGGCTCATGCACAGAC +
Preference number: 4 (lower is better)
Translates to: VFPITRDLKPAILELGYLYSSGT*RGSCTD
Trigger: GTCTGTGCATGAGCCCCTTCAGGTCCCTGAGGAATA...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAAAGCCACCCGAGGCCTTaGGGGGCCCTTTCAGAACCT +
Preference number: 4 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQSHPRP*GALSEP
Trigger: AGGTTCTGAAAGGGCCCCTCAAGGCCTCGGGTGGCT...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGCATCCAGAGGCTTTGTaGCATTGGTGTGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VFPITRDLKPAILELGYLHPEAL*HWCVPW
Trigger: CCAGGGGACACACCAATGGCACAAAGCCTCTGGATG...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp GGAGGATGCAGAAGGAACATCTGGGCTCAGCTATTTCATGCTGTCGGCCATACACCATTAATCACTGTCTaGTCCCTTCATTTGCGTAAG +
Preference number: 4 (lower is better)
Translates to: GGCRRNIWAQLFHAVGHTPLITV*SLHLRK
Trigger: CTTACGCAAATGAAGGGAGCAGACAGTGATTAATGG...TGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCATCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp CAAAACGTCGCAGCTTCAAAGACCTTCCATGGAGGGCGATGGGCTGAGGACAATTGCCTGTTCTTGTCTTaGATAAAGTCATATGGCTTC +
Preference number: 4 (lower is better)
Translates to: QNVAASKTFHGGRWAEDNCLFLS*IKSYGF
Trigger: GAAGCCATATGACTTTATCCAAGACAAGAACAGGCA...ATTGTCCTCAGCCCATCGCCCTCCATGGAAGGTCTTTGAAGCTGCGACGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAACATTGGTGTGTCCCCTaGCCAGCTTCACGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKHWCVP*PASRVL
Trigger: CAACACTCGTGAAGCTGGCCAGGGGACACACCAATG...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGCATTGGTGTGTCCCCTaGCCAGCTTCACGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: VFPITRDLKPAILELGYLHWCVP*PASRVL
Trigger: CAACACTCGTGAAGCTGGCCAGGGGACACACCAATG...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCTGTGAGGATATTCTCTaGACAGGTCATGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSCEDIL*TGHVFL
Trigger: AAGAAAGACATGACCTGTCCAGAGAATATCCTCACA...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GGAGGATGCAGAAGGAACATCTGGGCTCAGCTATTTCATGCTGTCGGCCATACAAATAAAACTGGCTATTaGCAGAGGGGAATCGAACGT +
Preference number: 4 (lower is better)
Translates to: GGCRRNIWAQLFHAVGHTNKTGY*QRGIER
Trigger: ACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATT...TGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCATCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCACAGAAAAGCAACAGCTaGAAGACATTTATATTACCT +
Preference number: 4 (lower is better)
Translates to: AITDRCPVAMASNGYLHPQKSNS*KTFILP
Trigger: AGGTAATATAAATGTCTTCCAGCTGTTGCTTTTCTG...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp TTCAGTGAGAACTTCCTATTTCAAGTTAAGTTCCCAGCTGTCCCAAGGCTTAGGGAGGTGATGGCAGTTTaGTCAGCTGTTTGCCAACCC +
Preference number: 4 (lower is better)
Translates to: FSENFLFQVKFPAVPRLREVMAV*SAVCQP
Trigger: GGGTTGGCAAACAGCTGACCAAACTGCCATCACCTC...CCTAAGCCTTGGGACAGCTGGGAACTTAACTTGAAATAGGAAGTTCTCACTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp CTGAAACCTGCTATTCTTGAGCTGGGATACCTGGAGTGGGATGAAGAGATGGCCATTCTAGTCAGTTGTTaGCCTTCTGGAAATGTGGGT +
Preference number: 4 (lower is better)
Translates to: LKPAILELGYLEWDEEMAILVSC*PSGNVG
Trigger: ACCCACATTTCCAGAAGGCCAACAACTGACTAGAAT...GGCCATCTCTTCATCCCACTCCAGGTATCCCAGCTCAAGAATAGCAGGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp CAAAACGTCGCAGCTTCAAAGACCTTCCATGGAGGGCGATGGGCTGAGGACAATAGCTTAGCTGTTCAGTaGCATTACTTTTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: QNVAASKTFHGGRWAEDNSLAVQ*HYFFCD
Trigger: GTCACAGAAAAAGTAATGCCACTGAACAGCTAAGCT...ATTGTCCTCAGCCCATCGCCCTCCATGGAAGGTCTTTGAAGCTGCGACGTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAAACTGTGGTTTCAGTCTaGTTGCACGGTGCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKTVVSV*LHGALW
Trigger: CCAAAGGGCACCGTGCAATCAGACTGAAACCACAGT...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp AAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATGTACCGCTGATAGAATaGGGAACTGGGCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: KFQTLFTGMLKSKLHVPYVPLIE*GTGLPG
Trigger: CCCCGGCAGCCCAGTTCCTCATTCTATCAGCGGTAC...ATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGCAGGGTGTAGGTACCTaGTGGTTTTCCACACGTCGA +
Preference number: 4 (lower is better)
Translates to: VFPITRDLKPAILELGYLQGVGT*WFSTRR
Trigger: TCGACGTGTGGAAAACCATCAGGTACCTACACCCTG...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp ATTGAAGATTTGAAGGGTGGATACTTCATCTACAGAAGGCAGCAGCTATTTGATATAGACTCCACGTTGTaGGAGGTTGAGCGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: IEDLKGGYFIYRRQQLFDIDSTL*EVERPG
Trigger: GCCAGGCCGCTCAACCTCTCACAACGTGGAGTCTAT...ATCAAATAGCTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAACCAGTTATTACCCCCTaGCAAAGTCTGCCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKPVITP*QSLPSV
Trigger: AACGGAGGGCAGACTTTGGCAGGGGGTAATAACTGG...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATCTTCAGCAAGGGGCTTaGCACAAAGCCCACCCCTCG +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHLQQGA*HKAHPS
Trigger: CGAGGGGTGGGCTTTGTGGCAAGCCCCTTGCTGAAG...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAAAGTCTGATTGCACGGTaGCCTTTGGAAGGTGCGGTT +
Preference number: 4 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKSLIAR*PLEGAV
Trigger: AACCGCACCTTCCAAAGGGCACCGTGCAATCAGACT...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp ATTCACTCCAATAAAACTGGCTATTGGCAGAGGGGAATCGAACGTCTGACTTGTAGAATAAGAGGACTGTaGGTGTGCCCTCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: IHSNKTGYWQRGIERLTCRIRGL*VCPPLL
Trigger: AAGCAGAGGAGGGCACACCCACAGTCCTCTTATTCT...ACAAGTCAGACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATTGGAGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp AAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATGATAGAATGAGGAACTaGGCTGCCGGGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KFQTLFTGMLKSKLHVPYDRMRN*AAGACS
Trigger: GGAGCAGGCCCCGGCAGCCCAGTTCCTCATTCTATC...ATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAAAGTAAGACAGCCTCCTaGGGCCCCTTCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKSKTAS*GPFFLG
Trigger: TCCAAGAAAGAAGGGGCCCCAGGAGGCTGTCTTACT...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396151.7
3UTR CAA 72 bp TTGAGAAAGGGCTGCAGGTGTCAAACTGCATCCTCTTaGCCAGACCCCAGAACCTCAAAACAAGCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: LRKGCRCQTASS*PDPRTSKQAVK
Trigger: TTTTACTGCTTGTTTTGAGGTTCTGGGGTCTGGCAAAGAGGATGCAGTTTGACACCTGCAGCCCTTTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CAA 72 bp TACAGAAGGCAGCAGCTATTTGATTCTAGTCAGTTGTaGGCCTTCTGGAAATGTGGGTGCAGTGCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: YRRQQLFDSSQL*AFWKCGCSAVR
Trigger: TCTGACAGCACTGCACCCACATTTCCAGAAGGCCAACAACTGACTAGAATCAAATAGCTGCTGCCTTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR CAA 72 bp ATCTACAGAAGGCAGCAGCTATTTGATTCTAGTCAGTaGTTGGCCTTCTGGAAATGTGGGTGCAGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: IYRRQQLFDSSQ*LAFWKCGCSAV
Trigger: GACAGCACTGCACCCACATTTCCAGAAGGCCAACAACTGACTAGAATCAAATAGCTGCTGCCTTCTGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAAATGGGCTTCCTTCACTaGTGGTTTTCCACACGTCGA +
Preference number: 4 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKMGFLH*WFSTRR
Trigger: TCGACGTGTGGAAAACCATCAGTGAAGGAAGCCCAT...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp CAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTTCGCTTGTCCGGATATaGCCCCACTCAGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QTLFTGMLKSKLHVPYYCSLVRI*PHSELA
Trigger: AGCCAGCTCTGAGTGGGGTCATATCCGGACAAGCGA...ACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAACTCAGGCCAGTACGGTaGAGAGTCCACGAAGTTCGG +
Preference number: 4 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQLRPVR*RVHEVR
Trigger: CCGAACTTCGTGGACTCTTCACCGTACTGGCCTGAG...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp ATTGAAGATTTGAAGGGTGGATACTTCATCTACAGAAGGCAGCAGCTATTTGATTCTCACCCTTCTGGGTaGGGCCCATTAGAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: IEDLKGGYFIYRRQQLFDSHPSG*GPLERN
Trigger: GTTCCTCTCTAATGGGCCTCACCCAGAAGGGTGAGA...ATCAAATAGCTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGACGGTACATTCCCAGGTaGCATTTTCCGACCATATGG +
Preference number: 4 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRRYIPR*HFPTIW
Trigger: CCATATGGTCGGAAAATGGCACCTGGGAATGTACCG...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp GGAGGATGCAGAAGGAACATCTGGGCTCAGCTATTTCATGCTGTCGGCCATACAATTTTTATATCCTGTTaGAACTTCTTCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: GGCRRNIWAQLFHAVGHTIFISC*NFFAIS
Trigger: CGAGATGGCGAAGAAGTTGCAACAGGATATAAAAAT...TGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCATCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GGTATTTCCAGAGTGTTGAATACTATGATTATGTTCAGCAGGGACTATAAACTTCTTCAGCAAGGGGCTTaGCACAAAGCCCACCCCTCG +
Preference number: 4 (lower is better)
Translates to: GISRVLNTMIMFSRDYKLLQQGA*HKAHPS
Trigger: CGAGGGGTGGGCTTTGTGGCAAGCCCCTTGCTGAAG...AAGTTTATAGTCCCTGCTGAACATAATCATAGTATTCAACACTCTGGAAATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAATGGTTTCAGTCTGATTaGACGGTGCCCTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKWFQSD*TVPFGR
Trigger: CCTTCCAAAGGGCACCGTGCAATCAGACTGAAACCA...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATAACTCAGCTGACGCTTaGAGGGCACCAAGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHNSADA*RAPRPV
Trigger: AACGGGCCTTGGTGCCCTCCAAGCGTCAGCTGAGTT...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGATTGAGCTGGGATACCTaGAGTGGGATGAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRLSWDT*SGMKRW
Trigger: CCATCTCTTCATCCCACTCCAGGTATCCCAGCTCAA...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR CAA 72 bp ATCCCTAGTTCCTATTCCAGCTTTTTCCCTGCTGTTTaGTCCTCCATTCTTCCAGCAGACAACAGGACTAGT +
Preference number: 4 (lower is better)
Translates to: IPSSYSSFFPAV*SSILPADNRTS
Trigger: ACTAGTCCTGTTGTCTGCTGGAAGAATGGAGGACAAAACAGCAGGGAAAAAGCTGGAATAGGAACTAGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp AAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTATTCCTCAGGGACCTaGAGGGGCTCATGCACAGAC +
Preference number: 4 (lower is better)
Translates to: KFQTLFTGMLKSKLHVPYYSSGT*RGSCTD
Trigger: GTCTGTGCATGAGCCCCTTCAGGTCCCTGAGGAATA...ATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATAGTCAGAGATGTGGATaGGCTCCCGGTTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHSQRCG*APGSSR
Trigger: GCGTGAAGAACCGGGAGCTCATCCACATCTCTGACT...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp TTCCAAGCATTGGTGAACACAATGGTGGGGCTAATGCAGAAAAGAGTATCATTTCGGTACATTCCCAGGTaGCATTTTCCGACCATATGG +
Preference number: 4 (lower is better)
Translates to: FQALVNTMVGLMQKRVSFRYIPR*HFPTIW
Trigger: CCATATGGTCGGAAAATGGCACCTGGGAATGTACCG...AAATGATACTCTTTTCTGCATTAGCCCCACCATTGTGTTCACCAATGCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp TTCAGTGAGAACTTCCTATTTCAAGTTAAGTTCCCAGCTGTCCCAAGGCTTAGGAAGGGACACCATTCCTaGATAGTGATGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: FSENFLFQVKFPAVPRLRKGHHS*IVMPVL
Trigger: AAGAACAGGCATCACTATGCAGGAATGGTGTCCCTT...CCTAAGCCTTGGGACAGCTGGGAACTTAACTTGAAATAGGAAGTTCTCACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAATTCTTCACGCCCTTCTaGTTCAGCAAGGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQFFTPF*FSKGLA
Trigger: GGCAAGCCCCTTGCTGAAGCAGAAGGGCGTGAAGAA...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp CAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTCATCCAGAGGCTTTGTaGCATTGGTGTGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: QTLFTGMLKSKLHVPYYCHPEAL*HWCVPW
Trigger: CCAGGGGACACACCAATGGCACAAAGCCTCTGGATG...ACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGTTCCCGCCTCTTCTaGCACTTCTGCAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVSSRLF*HFCRSH
Trigger: GTGGCTCCTGCAGAAGTGGCAGAAGAGGCGGGAACT...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGAGCTTCTTTTAGGAGCTaGGGCAGGAGTTTTTCATCC +
Preference number: 4 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRASFRS*GRSFSS
Trigger: GGATGAAAAACTCCTGCCCCAGCTCCTAAAAGAAGC...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp TTCCAAGCATTGGTGAACACAATGGTGGGGCTAATGCAGAAAAGAGTATCATTTAAATCCTCGGCGGGTTaGAAGGCATTCTTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: FQALVNTMVGLMQKRVSFKSSAG*KAFFPV
Trigger: TACCGGAAAGAATGCCTTCCAACCCGCCGAGGATTT...AAATGATACTCTTTTCTGCATTAGCCCCACCATTGTGTTCACCAATGCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
3UTR CAA 72 bp TATGGACTGTTCCACATTAGTAAGACATTAGTGGGATaGAGAAAGGGCTGCAGGTGTCAAACTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: YGLFHISKTLVG*RKGCRCQTASS
Trigger: AGAGGATGCAGTTTGACACCTGCAGCCCTTTCTCAATCCCACTAATGTCTTACTAATGTGGAACAGTCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAACAAGAGCACATCGTGTaGCATTCAGAGCGTCAATTA +
Preference number: 4 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKQEHIV*HSERQL
Trigger: TAATTGACGCTCTGAATGTCACACGATGTGCTCTTG...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp TTCCAAGCATTGGTGAACACAATGGTGGGGCTAATGCAGAAAAGAGTATCATTTAGCTTTGTGACGATGTaGGGATATTCTCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: FQALVNTMVGLMQKRVSFSFVTM*GYSLDR
Trigger: CCTGTCCAGAGAATATCCTCACATCGTCACAAAGCT...AAATGATACTCTTTTCTGCATTAGCCCCACCATTGTGTTCACCAATGCTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGGGCCAGATTATTTGGTaGTGTAAACCTGTACGGATC +
Preference number: 4 (lower is better)
Translates to: VFPITRDLKPAILELGYLGQIIW*CKPVRI
Trigger: GATCCGTACAGGTTTACAGCACCAAATAATCTGGCC...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp AAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATCCCCCTGCCAAAGTCTaGCCTCCGTTATCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: KFQTLFTGMLKSKLHVPYPPAKV*PPLSVE
Trigger: TTCTACAGATAACGGAGGGCAGACTTTGGCAGGGGG...ATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAATTCTTCACGCCCTTCTaGTTCAGCAAGGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: TFQARIRGNNLRLVRILKFFTPF*FSKGLA
Trigger: GGCAAGCCCCTTGCTGAAGCAGAAGGGCGTGAAGAA...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp TTCCAAGCATTGGTGAACACAATGGTGGGGCTAATGCAGAAAAGAGTATCATTTCAGGGCCAGATTATTTaGTGCTGTAAACCTGTACGG +
Preference number: 4 (lower is better)
Translates to: FQALVNTMVGLMQKRVSFQGQII*CCKPVR
Trigger: CCGTACAGGTTTACAGCACCAAATAATCTGGCCCTG...AAATGATACTCTTTTCTGCATTAGCCCCACCATTGTGTTCACCAATGCTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTACCAGAGGAACACAGCTaGGCTGACAGGGCCAGATTA +
Preference number: 4 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVPEEHS*ADRARL
Trigger: TAATCTGGCCCTGTCAGCCCAGCTGTGTTCCTCTGG...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATAGCCAGTCAGAGATGTaGATGAGCTCCCGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHSQSEM*MSSRFF
Trigger: GAAGAACCGGGAGCTCATCCACATCTCTGACTGGCT...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAGCAGCAGCTCAATTCTaGGGGATGGGCTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVAAAQF*GMGFLH
Trigger: GTGAAGGAAGCCCATCCCCCAGAATTGAGCTGCTGC...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp TTCCAAGCATTGGTGAACACAATGGTGGGGCTAATGCAGAAAAGAGTATCATTTGACAGGGAGAAGCCTTaGCCAACAGAACCATTAATC +
Preference number: 4 (lower is better)
Translates to: FQALVNTMVGLMQKRVSFDREKP*PTEPLI
Trigger: GATTAATGGTTCTGTTGGCCAAGGCTTCTCCCTGTC...AAATGATACTCTTTTCTGCATTAGCCCCACCATTGTGTTCACCAATGCTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp GGTATTTCCAGAGTGTTGAATACTATGATTATGTTCAGCAGGGACTATAAACTTGAAGTCCTCTCCCCCTaGCCACTAAGGGACAGTCAA +
Preference number: 4 (lower is better)
Translates to: GISRVLNTMIMFSRDYKLEVLSP*PLRDSQ
Trigger: TTGACTGTCCCTTAGTGGCCAGGGGGAGAGGACTTC...AAGTTTATAGTCCCTGCTGAACATAATCATAGTATTCAACACTCTGGAAATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp TACAAATACAAGATTGAAATTTTCTTCCTGTACTCCAAGGGAACATCTTGCAACGAGTCAGGCTGCTCTTaGAGTTTCTGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: YKYKIEIFFLYSKGTSCNESGCS*SFCPGR
Trigger: CCTCCCAGGACAGAAACTCCAAGAGCAGCCTGACTC...GTTGCAAGATGTTCCCTTGGAGTACAGGAAGAAAATTTCAATCTTGTATTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp TTCAGTGAGAACTTCCTATTTCAAGTTAAGTTCCCAGCTGTCCCAAGGCTTAGGTTTCATATCCTTTCCTaGGGTTTCTTCTCACTGCTA +
Preference number: 4 (lower is better)
Translates to: FSENFLFQVKFPAVPRLRFHILS*GFFSLL
Trigger: TAGCAGTGAGAAGAAACCTCAGGAAAGGATATGAAA...CCTAAGCCTTGGGACAGCTGGGAACTTAACTTGAAATAGGAAGTTCTCACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR TCA 90 bp TTCAGTGAGAACTTCCTATTTCAAGTTAAGTTCCCAGCTGTCCCAAGGCTTAGGAGAAATGGAAATTGCTaGCAAGAGAGTACCTTTGGT +
Preference number: 4 (lower is better)
Translates to: FSENFLFQVKFPAVPRLRRNGNC*QESTFG
Trigger: ACCAAAGGTACTCTCTTGTCAGCAATTTCCATTTCT...CCTAAGCCTTGGGACAGCTGGGAACTTAACTTGAAATAGGAAGTTCTCACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAACGGTACATTCCCAGGTaGCATTTTCCGACCATATGG +
Preference number: 4 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQRYIPR*HFPTIW
Trigger: CCATATGGTCGGAAAATGGCACCTGGGAATGTACCG...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAACCAGTTATTACCCCCTaGCAAAGTCTGCCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: TFQARIRGNNLRLVRILKPVITP*QSLPSV
Trigger: AACGGAGGGCAGACTTTGGCAGGGGGTAATAACTGG...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp ATTCACTCCAATAAAACTGGCTATTGGCAGAGGGGAATCGAACGTCTGACTTGTCAACAGCAGGAGTGTTaGAGATTTTATCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: IHSNKTGYWQRGIERLTCQQQEC*RFYQLL
Trigger: AAGAAGCTGATAAAATCTGCAACACTCCTGCTGTTG...ACAAGTCAGACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATTGGAGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR GCA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAAGTGCCCTTTGGAAGGTaGGGTTACTTTCAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQVPFGR*GYFQVA
Trigger: GGCAACTTGAAAGTAACCGCACCTTCCAAAGGGCAC...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp ATTGAAGATTTGAAGGGTGGATACTTCATCTACAGAAGGCAGCAGCTATTTGATTCAATGGAGTCAGGCTaGTCTTGGAGTTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: IEDLKGGYFIYRRQQLFDSMESG*SWSFCP
Trigger: AGGACAGAAACTCCAAGAGCAGCCTGACTCCATTGA...ATCAAATAGCTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGAAAAAGCTATCATTCTTaGTCAATGGAGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRKSYHS*SMESGC
Trigger: GCAGCCTGACTCCATTGAGCAAGAATGATAGCTTTT...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAAAAATCCTCGGCGGGTTaGAAGGCATTCTTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQKSSAG*KAFFPV
Trigger: TACCGGAAAGAATGCCTTCCAACCCGCCGAGGATTT...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp AAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATCAGAGGCTTCTCTGGTaGATGGTTAGTTATGAGGGC +
Preference number: 4 (lower is better)
Translates to: KFQTLFTGMLKSKLHVPYQRLLW*MVSYEG
Trigger: GCCCTCATAACTAACCATCCACCAGAGAAGCCTCTG...ATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTACAGCTTCACGAGTGTTaGCAGCCAGTCAGAGATGTG +
Preference number: 4 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVQLHEC*QPVRDV
Trigger: CACATCTCTGACTGGCTGCCAACACTCGTGAAGCTG...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp TTCAGTGAGAACTTCCTATTTCAAGTTAAGTTCCCAGCTGTCCCAAGGCTTAGGCTGTATTCAGCTCATTaGACTAGCATCTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: FSENFLFQVKFPAVPRLRLYSAH*TSIFHG
Trigger: ACCATGAAAGATGCTAGTCCAATGAGCTGAATACAG...CCTAAGCCTTGGGACAGCTGGGAACTTAACTTGAAATAGGAAGTTCTCACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp AAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTTGCACGGTGCCCTTTaGAAGGTGCGGTTACTTTCA +
Preference number: 4 (lower is better)
Translates to: KFQTLFTGMLKSKLHVPYLHGAL*KVRLLS
Trigger: TGAAAGTAACCGCACCTTCCAAAGGGCACCGTGCAA...ATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp GGTATTTCCAGAGTGTTGAATACTATGATTATGTTCAGCAGGGACTATAAACTTCTAGTCTCACCCTTCTaGGTGAGGCCCATTAGAGAG +
Preference number: 4 (lower is better)
Translates to: GISRVLNTMIMFSRDYKLLVSPF*VRPIRE
Trigger: CTCTCTAATGGGCCTCACCCAGAAGGGTGAGACTAG...AAGTTTATAGTCCCTGCTGAACATAATCATAGTATTCAACACTCTGGAAATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
3UTR CAA 72 bp CTGTATTGGAACTTGGGAACAATAGAGATTGAAGATTaGAAGGGTGGATACTTCATCTACAGAAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LYWNLGTIEIED*KGGYFIYRRQQ
Trigger: CTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAATCTCTATTGTTCCCAAGTTCCAATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAAAAGGCACTTTTCCTATaGTGCCAGGTTCCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQKALFL*CQVPSS
Trigger: GGAACTAGGAACCTGGCATCATAGGAAAAGTGCCTT...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGATTTTGCAGTCCATTTaGATTCTCTCTGTGCACATG +
Preference number: 4 (lower is better)
Translates to: VFPITRDLKPAILELGYLILQSI*ILSVHM
Trigger: CATGTGCACAGAGAGAATTCAAATGGACTGCAAAAT...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGAGGGAACAATAGAGATTaGAGATTTGAAGGGTGGATA +
Preference number: 4 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRGNNRD*RFEGWI
Trigger: TATCCACCCTTCAAATCTTCAATCTCTATTGTTCCC...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp ATTGAAGATTTGAAGGGTGGATACTTCATCTACAGAAGGCAGCAGCTATTTGATAAGGGACACCATTCCTaGATAGTGATGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: IEDLKGGYFIYRRQQLFDKGHHS*IVMPVL
Trigger: AAGAACAGGCATCACTATGCAGGAATGGTGTCCCTT...ATCAAATAGCTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp CAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTCGGTTACTTTCAAGTTaGCCTGGGAGGATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: QTLFTGMLKSKLHVPYYCRLLSS*PGRIWS
Trigger: ACTCCAAATCCTCCCAGGGCAACTTGAAAGTAACCG...ACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGAAACTGGCAGTCATCTTaGTCATCTGTGTGTTCATTT +
Preference number: 4 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRNWQSS*SSVCSF
Trigger: AAATGAACACACAGATGAGCAAGATGACTGCCAGTT...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp TTTTGCCTTCCTGGCACTTATCACAACTGGCAGTCATCTTGCTCATCTGTGTGTGACTATAAACTTAAATaGCTACAGAGACTAAGTAGG +
Preference number: 4 (lower is better)
Translates to: FCLPGTYHNWQSSCSSVCDYKLK*LQRLSR
Trigger: CCTACTTAGTCTCTGTAGGCATTTAAGTTTATAGTC...ACACACAGATGAGCAAGATGACTGCCAGTTGTGATAAGTGCCAGGAAGGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGGAGAAAAGGTTTTACTaGTTTGCTTCTCAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: VFPITRDLKPAILELGYLEKRFY*FASQLS
Trigger: GCTAAGCTGAGAAGCAAAGCAGTAAAACCTTTTCTC...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp CAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTCAGGGCCAGATTATTTaGTGCTGTAAACCTGTACGG +
Preference number: 4 (lower is better)
Translates to: QTLFTGMLKSKLHVPYYCQGQII*CCKPVR
Trigger: CCGTACAGGTTTACAGCACCAAATAATCTGGCCCTG...ACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATGCTTCTTTTAGGAGCTaGGGCAGGAGTTTTTCATCC +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHASFRS*GRSFSS
Trigger: GGATGAAAAACTCCTGCCCCAGCTCCTAAAAGAAGC...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAAAAATCCTCGGCGGGTTaGAAGGCATTCTTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: TFQARIRGNNLRLVRILKKSSAG*KAFFPV
Trigger: TACCGGAAAGAATGCCTTCCAACCCGCCGAGGATTT...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp TACAAATACAAGATTGAAATTTTCTTCCTGTACTCCAAGGGAACATCTTGCAACCAGAGGCTTCTCTGGTaGATGGTTAGTTATGAGGGC +
Preference number: 4 (lower is better)
Translates to: YKYKIEIFFLYSKGTSCNQRLLW*MVSYEG
Trigger: GCCCTCATAACTAACCATCCACCAGAGAAGCCTCTG...GTTGCAAGATGTTCCCTTGGAGTACAGGAAGAAAATTTCAATCTTGTATTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAAACTTTCAAGTTGCCCTaGGAGGATTTGGAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQTFKLP*EDLECC
Trigger: GCAACACTCCAAATCCTCCCAGGGCAACTTGAAAGT...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp AAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATGTGGAGGAAAGCATCTaGGCCTACATTTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: KFQTLFTGMLKSKLHVPYVEESI*AYIFLK
Trigger: CTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCAC...ATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAATTGGAGTTTCTGTCCTaGGAGGAAAAAGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TFQARIRGNNLRLVRILKLEFLS*EEKGQG
Trigger: ACCCTGCCCTTTTTCCTCCCAGGACAGAAACTCCAA...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp ATTGAAGATTTGAAGGGTGGATACTTCATCTACAGAAGGCAGCAGCTATTTGATATCATTCTTGCTCAATaGAGTCAGGCTGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: IEDLKGGYFIYRRQQLFDIILAQ*SQAALG
Trigger: TCCAAGAGCAGCCTGACTCCATTGAGCAAGAATGAT...ATCAAATAGCTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp GGTATTTCCAGAGTGTTGAATACTATGATTATGTTCAGCAGGGACTATAAACTTCAGTTGTTGGCCTTCTaGAAATGTGGGTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GISRVLNTMIMFSRDYKLQLLAF*KCGCSA
Trigger: AGCACTGCACCCACATTTCCAGAAGGCCAACAACTG...AAGTTTATAGTCCCTGCTGAACATAATCATAGTATTCAACACTCTGGAAATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGTTTTTAAAGCTGCAGTaGCATTTCCTACTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: VFPITRDLKPAILELGYLFLKLQ*HFLLLH
Trigger: ATGAAGCAGTAGGAAATGTCACTGCAGCTTTAAAAA...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATTCAGAACCTTGGGTCTaGAGTCATTTCTTATGCCCT +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHSEPWV*SHFLCP
Trigger: AGGGCATAAGAAATGACTTCAGACCCAAGGTTCTGA...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp TACAAATACAAGATTGAAATTTTCTTCCTGTACTCCAAGGGAACATCTTGCAACTGGGTTTGTAAGAGATaGGGACCTTCCCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: YKYKIEIFFLYSKGTSCNWVCKR*GPSLVS
Trigger: TGAGACTAGGGAAGGTCCTCATCTCTTACAAACCCA...GTTGCAAGATGTTCCCTTGGAGTACAGGAAGAAAATTTCAATCTTGTATTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGAATTTTTATATCCTGTTaGAACTTCTTCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRIFISC*NFFAIS
Trigger: CGAGATGGCGAAGAAGTTGCAACAGGATATAAAAAT...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp TTCCAAGCATTGGTGAACACAATGGTGGGGCTAATGCAGAAAAGAGTATCATTTTCTGCTCCCTTCATTTaGGTAAGAAATGTGATTCAC +
Preference number: 4 (lower is better)
Translates to: FQALVNTMVGLMQKRVSFSAPFI*VRNVIH
Trigger: GTGAATCACATTTCTTACGCAAATGAAGGGAGCAGA...AAATGATACTCTTTTCTGCATTAGCCCCACCATTGTGTTCACCAATGCTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATGGCTTCTCTGGTGGATaGTTAGTTATGAGGGCTATA +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHGFSGG*LVMRAI
Trigger: TATAGCCCTCATAACTAACCATCCACCAGAGAAGCC...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAGGCCAGATTATTTGGTaGTGTAAACCTGTACGGATC +
Preference number: 4 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVGQIIW*CKPVRI
Trigger: GATCCGTACAGGTTTACAGCACCAAATAATCTGGCC...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAAGGGACACCATTCCTaGATAGTGATGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVKGHHS*IVMPVL
Trigger: AAGAACAGGCATCACTATGCAGGAATGGTGTCCCTT...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTATTCGGGTCAATATTATaGAGCAGCTCAATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVFGSIL*SSSILG
Trigger: CCCCAGAATTGAGCTGCTGCATAATATTGACCCGAA...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp GGTATTTCCAGAGTGTTGAATACTATGATTATGTTCAGCAGGGACTATAAACTTGAAATGTGGGTGCAGTaGTGTCAGACCTTCCTATTT +
Preference number: 4 (lower is better)
Translates to: GISRVLNTMIMFSRDYKLEMWVQ*CQTFLF
Trigger: AAATAGGAAGGTCTGACAGCACTGCACCCACATTTC...AAGTTTATAGTCCCTGCTGAACATAATCATAGTATTCAACACTCTGGAAATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp CAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAACAGAGGCTTCTCTaGTGGATGGTTAGTTATGAG +
Preference number: 4 (lower is better)
Translates to: QTLFTGMLKSKLHVPYYCKQRLL*WMVSYE
Trigger: CTCATAACTAACCATCCACCAGAGAAGCCTCTGTTT...ACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGTTTGCAACTGGAAATTaGTCAAAGTATGGTATTTCC +
Preference number: 4 (lower is better)
Translates to: VFPITRDLKPAILELGYLFATGN*SKYGIS
Trigger: GGAAATACCATACTTTGACCAATTTCCAGTTGCAAA...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGATCTCGAAGGAAAACATaGAACTTTGAGTTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRSRRKT*NFELQN
Trigger: ATTTTGCAACTCAAAGTTCCATGTTTTCCTTCGAGA...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAGTGTTGCGTGGTCATTaGATAAATAGCTCATTCGCT +
Preference number: 4 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVVLRGH*INSSFA
Trigger: AGCGAATGAGCTATTTATTCAATGACCACGCAACAC...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR GCA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAATTCCAGCTTTTTCCCTaGTGTTTTGTCCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: TFQARIRGNNLRLVRILKFQLFP*CFVLHS
Trigger: AGAATGGAGGACAAAACAGCAGGGAAAAAGCTGGAA...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAAAAACAGAGGCTTCTCTaGTGGATGGTTAGTTATGAG +
Preference number: 4 (lower is better)
Translates to: TFQARIRGNNLRLVRILKKQRLL*WMVSYE
Trigger: CTCATAACTAACCATCCACCAGAGAAGCCTCTGTTT...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATTGCCTGTTCTTGTCTTaGATAAAGTCATATGGCTTC +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHCLFLS*IKSYGF
Trigger: GAAGCCATATGACTTTATCCAAGACAAGAACAGGCA...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp CAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTTTTTTAAAGCTGCAGTaGCATTTCCTACTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: QTLFTGMLKSKLHVPYYCFLKLQ*HFLLLH
Trigger: ATGAAGCAGTAGGAAATGTCACTGCAGCTTTAAAAA...ACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR TCA 90 bp TACAAATACAAGATTGAAATTTTCTTCCTGTACTCCAAGGGAACATCTTGCAACTCTTCTATCCATTCCTaGACTCACAGGACTTTAAAC +
Preference number: 4 (lower is better)
Translates to: YKYKIEIFFLYSKGTSCNSSIHS*THRTLN
Trigger: GTTTAAAGTCCTGTGAGTTCAGGAATGGATAGAAGA...GTTGCAAGATGTTCCCTTGGAGTACAGGAAGAAAATTTCAATCTTGTATTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR TCA 90 bp GGTATTTCCAGAGTGTTGAATACTATGATTATGTTCAGCAGGGACTATAAACTTGTCATCGCATATGAATaGGCACATAATGAGCACAAA +
Preference number: 4 (lower is better)
Translates to: GISRVLNTMIMFSRDYKLVIAYE*AHNEHK
Trigger: TTTGTGCTCATTATGTGCTCATTCATATGCGATGAC...AAGTTTATAGTCCCTGCTGAACATAATCATAGTATTCAACACTCTGGAAATACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAAATTTTTATATCCTGTTaGAACTTCTTCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQIFISC*NFFAIS
Trigger: CGAGATGGCGAAGAAGTTGCAACAGGATATAAAAAT...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTAAATTTGCACTGTaGTTTCAGTCTGATTGCACG +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHIKFAL*FQSDCT
Trigger: CGTGCAATCAGACTGAAACCACAGTGCAAATTTAAT...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATTCATTTCTTATGCCCTaGGTTATCATCTTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHSFLMP*VIIFSR
Trigger: TCTACTGAAGATGATAACCCAGGGCATAAGAAATGA...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CCA 90 bp TACAAATACAAGATTGAAATTTTCTTCCTGTACTCCAAGGGAACATCTTGCAACTATTGCTCTACACTGTaGGGGTTAAACAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: YKYKIEIFFLYSKGTSCNYCSTL*GLNRKK
Trigger: CTTTTTCCTGTTTAACCCCCACAGTGTAGAGCAATA...GTTGCAAGATGTTCCCTTGGAGTACAGGAAGAAAATTTCAATCTTGTATTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR GCA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTACATTATTCACTGGGATaGTCAAAAGTAAGCTACATG +
Preference number: 4 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVHYSLG*SKVSYM
Trigger: CATGTAGCTTACTTTTGAGCATCCCAGTGAATAATG...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS CCA 90 bp CCGACGTCGTTCCAGCCTAGGTCGTCTGCCAGCAAGAAGACCAGGTaGGGCGGCCGGCTGGCCCCGGCGCCCGAGCCCGGCGGCGCCAAC +
Preference number: 5 (lower is better)
Translates to: PTSFQPRSSASKKTR*GGRLAPAPEPGGAN
Trigger: GTTGGCGCCGCCGGGCTCGGGCGCCGGGGCCAGCCGGCCGCCCCACCTGGTCTTCTTGCTGGCAGACGACCTAGGCTGGAACGACGTCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000565165.2
CDS GCA 90 bp TGTCCAGGAGCACCCCGCCGGCCGCCAGCGCGTCCAGGTGCGGCGTaGGGATGCGGGAGCCGTGGAAGCCGACGTCGTTCCAGCCTAGGT +
Preference number: 5 (lower is better)
Translates to: CPGAPRRPPARPGAA*GCGSRGSRRRSSLG
Trigger: ACCTAGGCTGGAACGACGTCGGCTTCCACGGCTCCCGCATCCGCACGCCGCACCTGGACGCGCTGGCGGCCGGCGGGGTGCTCCTGGACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000565165.2
CDS TCA 90 bp GACGAACCCGCGGGCGCCCGCTGCCCGGCTTCTTGGAAACTCAGCTaGCGCTTGGAGGGCACCAAGGCCCGTTATCTTCCCCGGCAATTA +
Preference number: 5 (lower is better)
Translates to: DEPAGARCPASWKLS*RLEGTKARYLPRQL
Trigger: TAATTGCCGGGGAAGATAACGGGCCTTGGTGCCCTCCAAGCGTCAGCTGAGTTTCCAAGAAGCCGGGCAGCGGGCGCCCGCGGGTTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396151.7
ENST00000521117.1
CDS GCA 90 bp AGCCAGTCAGAGATGTGGATGAGCTCCCGGTTCTTCACGCCCTTCTaGTTCAGCAAGGGGCTTGCCACAAAGCCCACCCCTCGGACGCCT +
Preference number: 5 (lower is better)
Translates to: SQSEMWMSSRFFTPF*FSKGLATKPTPRTP
Trigger: AGGCGTCCGAGGGGTGGGCTTTGTGGCAAGCCCCTTGCTGAAGCAGAAGGGCGTGAAGAACCGGGAGCTCATCCACATCTCTGACTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000521800.2
ENST00000565165.2
CDS-3UTR CAA 90 bp GTAGCGATGGCCTCCAACGGCTACCTACACCCAGCCCTGGGATTCGGAGGATGCAGCCATCCAGAGGCTTaGTGCCATTGGTGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: VAMASNGYLHPALGFGGCSHPEA*CHWCVP
Trigger: GGGGACACACCAATGGCACAAAGCCTCTGGATGGCT...GCATCCTCCGAATCCCAGGGCTGGGTGTAGGTAGCCGTTGGAGGCCATCGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS TCA 90 bp CCCTGGCCAGCTTCACGAGTGTTGGCAGCCAGTCAGAGATGTGGATaGGCTCCCGGTTCTTCACGCCCTTCTGCTTCAGCAAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: PWPASRVLAASQRCG*APGSSRPSASARGL
Trigger: CAAGCCCCTTGCTGAAGCAGAAGGGCGTGAAGAACCGGGAGCTCATCCACATCTCTGACTGGCTGCCAACACTCGTGAAGCTGGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000521800.2
ENST00000565165.2
CDS CCA 90 bp TGTCCCCTGGCCAGCTTCACGAGTGTTGGCAGCCAGTCAGAGATGTaGATGAGCTCCCGGTTCTTCACGCCCTTCTGCTTCAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: CPLASFTSVGSQSEM*MSSRFFTPFCFSKG
Trigger: CCCCTTGCTGAAGCAGAAGGGCGTGAAGAACCGGGAGCTCATCCACATCTCTGACTGGCTGCCAACACTCGTGAAGCTGGCCAGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000521800.2
ENST00000565165.2
CDS CCA 90 bp AGGCTTTGTGCCATTGGTGTGTCCCCTGGCCAGCTTCACGAGTGTTaGCAGCCAGTCAGAGATGTGGATGAGCTCCCGGTTCTTCACGCC +
Preference number: 5 (lower is better)
Translates to: RLCAIGVSPGQLHEC*QPVRDVDELPVLHA
Trigger: GGCGTGAAGAACCGGGAGCTCATCCACATCTCTGACTGGCTGCCAACACTCGTGAAGCTGGCCAGGGGACACACCAATGGCACAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000521800.2
ENST00000565165.2
CDS CCA 90 bp TGGAGCCATGCTGTTCCTGGGACCCAAGCAGGACTTCTGTGCTCCTaGGGTTTTCATGCAGGGTGTGTCGGTGGTGGAAAAGGCGGGACA +
Preference number: 5 (lower is better)
Translates to: WSHAVPGTQAGLLCS*GFHAGCVGGGKGGT
Trigger: TGTCCCGCCTTTTCCACCACCGACACACCCTGCATGAAAACCCCAGGAGCACAGAAGTCCTGCTTGGGTCCCAGGAACAGCATGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521011.1
CDS-3UTR CAA 90 bp AGCTTCAGCCCTAGGGGCAAAAGTAAGGCAGGGCTCAGCAGCGTTCCAGAAATCGCTTCAGCAAGGGGCTaGCCACAAAGCCCACCCCTC +
Preference number: 5 (lower is better)
Translates to: SFSPRGKSKAGLSSVPEIASARG*PQSPPL
Trigger: GAGGGGTGGGCTTTGTGGCAAGCCCCTTGCTGAAGC...GATTTCTGGAACGCTGCTGAGCCCTGCCTTACTTTTGCCCCTAGGGCTGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp ATGAAGAGATGGCCTGAGGAAGTCCTCTCCCCCTGGCCACTAAGGGACAGTCAAGCTTCAGCAAGGGGCTaGCCACAAAGCCCACCCCTC +
Preference number: 5 (lower is better)
Translates to: MKRWPEEVLSPWPLRDSQASARG*PQSPPL
Trigger: GAGGGGTGGGCTTTGTGGCAAGCCCCTTGCTGAAGC...TTGACTGTCCCTTAGTGGCCAGGGGGAGAGGACTTCCTCAGGCCATCTCTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp GTAGCGATGGCCTCCAACGGCTACCTACACCCAGCCCTGGGATTCGGAGGATGCAGGCAGGAGAATAGCTaGAACCTGGGAGTTAGAGGC +
Preference number: 5 (lower is better)
Translates to: VAMASNGYLHPALGFGGCRQENS*NLGVRG
Trigger: GCCTCTAACTCCCAGGTTCAAGCTATTCTCCTGCCT...GCATCCTCCGAATCCCAGGGCTGGGTGTAGGTAGCCGTTGGAGGCCATCGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp ATTCACTCCAATAAAACTGGCTATTGGCAGAGGGGAATCGAACGTCTGACTTGTCGCGCGGACCCATCCTaGTCCGCCCGCGGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: IHSNKTGYWQRGIERLTCRADPS*SARGPS
Trigger: GCTGGGACCGCGGGCGGACAAGGATGGGTCCGCGCG...ACAAGTCAGACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATTGGAGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp GATGCCACAGAGCCAAGCATCTCCCACCCAGCCCTCTTAGTGTCTACCATGAACAGAGGCTTTGTGCCATaGGTGTGTCCCCTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: DATEPSISHPALLVSTMNRGFVP*VCPLAS
Trigger: GCTGGCCAGGGGACACACCAATGGCACAAAGCCTCT...GTTCATGGTAGACACTAAGAGGGCTGGGTGGGAGATGCTTGGCTCTGTGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp CTAAGGCATGTGCCTCCCAACCTTGGGGGCTATTGCTCTACACTGTGGGGGTTAAGAGGCTTTGTGCCATaGGTGTGTCCCCTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LRHVPPNLGGYCSTLWGLRGFVP*VCPLAS
Trigger: GCTGGCCAGGGGACACACCAATGGCACAAAGCCTCT...TAACCCCCACAGTGTAGAGCAATAGCCCCCAAGGTTGGGAGGCACATGCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCAGCCAGAGGGTCTTGGTaGGTGGGTCTGATGAGGGTA +
Preference number: 5 (lower is better)
Translates to: AITDRCPVAMASNGYLHPARGSW*VGLMRV
Trigger: TACCCTCATCAGACCCACCAACCAAGACCCTCTGGC...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAACGCGCGGACCCATCCTaGTCCGCCCGCGGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKRADPS*SARGPS
Trigger: GCTGGGACCGCGGGCGGACAAGGATGGGTCCGCGCG...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCAGGAGGTGATGGCAGTTaGGTCAGCTGTTTGCCAACC +
Preference number: 5 (lower is better)
Translates to: AITDRCPVAMASNGYLHPGGDGS*VSCLPT
Trigger: GGTTGGCAAACAGCTGACCAAACTGCCATCACCTCC...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCACAAACTGCATCCTCTTaGCCAGACCCCAGAACCTCA +
Preference number: 5 (lower is better)
Translates to: AITDRCPVAMASNGYLHPQTASS*PDPRTS
Trigger: TGAGGTTCTGGGGTCTGGCAAAGAGGATGCAGTTTG...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp GCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAACGGCTACCTACACCCAGCAGTGTTCCAAGCATaGGTGAACACAATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: AITDRCPVAMASNGYLHPAVFQA*VNTMVG
Trigger: CCCCACCATTGTGTTCACCAATGCTTGGAACACTGC...TGGGTGTAGGTAGCCGTTGGAGGCCATCGCTACAGGGCACCTATCTGTTATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp CAAAACGTCGCAGCTTCAAAGACCTTCCATGGAGGGCGATGGGCTGAGGACAATCAAATCCTCGGCGGGTaGGAAGGCATTCTTTCCGGT +
Preference number: 5 (lower is better)
Translates to: QNVAASKTFHGGRWAEDNQILGG*EGILSG
Trigger: ACCGGAAAGAATGCCTTCCAACCCGCCGAGGATTTG...ATTGTCCTCAGCCCATCGCCCTCCATGGAAGGTCTTTGAAGCTGCGACGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCCCAGCTTCACGAGTGTaGGCAGCCAGTCAGAGATGT +
Preference number: 5 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSPASRV*AASQRC
Trigger: ACATCTCTGACTGGCTGCCAACACTCGTGAAGCTGG...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCCTCAGAAACATTGTATaGAGACGGTGGAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: AVGRTAAITDRCPVAMASLRNIV*RRWREP
Trigger: TGGTTCCCTCCACCGTCTCAATACAATGTTTCTGAG...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp ATTCACTCCAATAAAACTGGCTATTGGCAGAGGGGAATCGAACGTCTGACTTGTCACACCCCAGTGGCCTaGGGATCACAGCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: IHSNKTGYWQRGIERLTCHTPVA*GSQRGS
Trigger: GGACCCCCGCTGTGATCCCAAGGCCACTGGGGTGTG...ACAAGTCAGACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATTGGAGTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp GCTGTTGGGAGGACAGCAGCGATAACAGATAGGTGCCCTGTAGCGATGGCCTCCAAAGCCACAGAAGAATaGGAAGTGGCAGGAAGTCTA +
Preference number: 5 (lower is better)
Translates to: AVGRTAAITDRCPVAMASKATEE*EVAGSL
Trigger: TAGACTTCCTGCCACTTCCAATTCTTCTGTGGCTTT...GGAGGCCATCGCTACAGGGCACCTATCTGTTATCGCTGCTGTCCTCCCAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS TCA 90 bp TTGGAGTTTCTGTCCTGGGAGGAAAAAGGGCAGGGTGTAGGTACCTaGTGGTTTTCCACACGTCGAAGCCATCCAGAGGCTTTGTGCCAT +
Preference number: 5 (lower is better)
Translates to: LEFLSWEEKGQGVGT*WFSTRRSHPEALCH
Trigger: ATGGCACAAAGCCTCTGGATGGCTTCGACGTGTGGAAAACCATCAGGTACCTACACCCTGCCCTTTTTCCTCCCAGGACAGAAACTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp GGAGGATGCAGAAGGAACATCTGGGCTCAGCTATTTCATGCTGTCGGCCATACAGAGAAGAGTCATCCTTaGCTGGAGCCATGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: GGCRRNIWAQLFHAVGHTEKSHP*LEPCCS
Trigger: GGAACAGCATGGCTCCAGCAAAGGATGACTCTTCTC...TGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCATCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCCGACAGGGAGAAGCCTaGGCCAACAGAACCATTAAT +
Preference number: 5 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSRQGEA*ANRTIN
Trigger: ATTAATGGTTCTGTTGGCCAAGGCTTCTCCCTGTCG...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp GGAGGATGCAGAAGGAACATCTGGGCTCAGCTATTTCATGCTGTCGGCCATACAAGAGGGGTGGTTCACTaGGAGTGCCTGAACATGATC +
Preference number: 5 (lower is better)
Translates to: GGCRRNIWAQLFHAVGHTRGVVH*ECLNMI
Trigger: GATCATGTTCAGGCACTCCAAGTGAACCACCCCTCT...TGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCATCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS GCA 90 bp TTCCTGGGACACGGTGAAGAGTCCACGAAGTTCGGGTCAATATTATaGAGCAGCTCAATTCTGGGGGATGGGCTTCCTTCACTGATGGTT +
Preference number: 5 (lower is better)
Translates to: FLGHGEESTKFGSIL*SSSILGDGLPSLMV
Trigger: AACCATCAGTGAAGGAAGCCCATCCCCCAGAATTGAGCTGCTGCATAATATTGACCCGAACTTCGTGGACTCTTCACCGTGTCCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS GCA 90 bp TTTGCACTGTGGTTTCAGTCTGATTGCACGGTGCCCTTTGGAAGGTaGGGTTACTTTCAAGTTGCCCTGGGAGGATTTGGAGTGTTGCGT +
Preference number: 5 (lower is better)
Translates to: FALWFQSDCTVPFGR*GYFQVALGGFGVLR
Trigger: ACGCAACACTCCAAATCCTCCCAGGGCAACTTGAAAGTAACCGCACCTTCCAAAGGGCACCGTGCAATCAGACTGAAACCACAGTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS GCA 90 bp TCAGGCCAGTACGGTGAAGAGTCCACGAAGTTCGGGTCAATATTATaGAGCAGCTCAATTCTGGGGGATGGGCTTCCTTCACTGATGGTT +
Preference number: 5 (lower is better)
Translates to: SGQYGEESTKFGSIL*SSSILGDGLPSLMV
Trigger: AACCATCAGTGAAGGAAGCCCATCCCCCAGAATTGAGCTGCTGCATAATATTGACCCGAACTTCGTGGACTCTTCACCGTACTGGCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp AAGTCCACTGGGTGCAGAACATCCCCCACTGTGCCTGAAAACCAAGGAACTAGAAAGATGAACACCGTGTaGTTCCAGAGCCCACTGCTT +
Preference number: 5 (lower is better)
Translates to: KSTGCRTSPTVPENQGTRKMNTV*FQSPLL
Trigger: AAGCAGTGGGCTCTGGAACAACACGGTGTTCATCTT...TCTAGTTCCTTGGTTTTCAGGCACAGTGGGGGATGTTCTGCACCCAGTGGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp GATGCCACAGAGCCAAGCATCTCCCACCCAGCCCTCTTAGTGTCTACCATGAACCCAACAGCAGGAGTGTaGCAGATTTTATCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: DATEPSISHPALLVSTMNPTAGV*QILSAS
Trigger: AGAAGCTGATAAAATCTGCAACACTCCTGCTGTTGG...GTTCATGGTAGACACTAAGAGGGCTGGGTGGGAGATGCTTGGCTCTGTGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp AGGGGTGAACCAAGAGGGGTGGTTCACTTGGAGTGCCTGAACATGATCCTTCACCCAGACACTGGCCACTaGCTTTTTCATATCCTTTCC +
Preference number: 5 (lower is better)
Translates to: RGEPRGVVHLECLNMILHPDTGH*LFHILS
Trigger: GGAAAGGATATGAAAAAGCAAGTGGCCAGTGTCTGG...GTGAAGGATCATGTTCAGGCACTCCAAGTGAACCACCCCTCTTGGTTCACCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp GATGCCACAGAGCCAAGCATCTCCCACCCAGCCCTCTTAGTGTCTACCATGAACGACAAGAGAGTACCTTaGGTAGGCACAGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: DATEPSISHPALLVSTMNDKRVP*VGTVPF
Trigger: AAAAGGAACTGTGCCTACCAAAGGTACTCTCTTGTC...GTTCATGGTAGACACTAAGAGGGCTGGGTGGGAGATGCTTGGCTCTGTGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp CAAAACGTCGCAGCTTCAAAGACCTTCCATGGAGGGCGATGGGCTGAGGACAATGATTCTAGTCAGTTGTaGGCCTTCTGGAAATGTGGG +
Preference number: 5 (lower is better)
Translates to: QNVAASKTFHGGRWAEDNDSSQL*AFWKCG
Trigger: CCCACATTTCCAGAAGGCCAACAACTGACTAGAATC...ATTGTCCTCAGCCCATCGCCCTCCATGGAAGGTCTTTGAAGCTGCGACGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAAAGAGGCTTTGTGCCATaGGTGTGTCCCCTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKRGFVP*VCPLAS
Trigger: GCTGGCCAGGGGACACACCAATGGCACAAAGCCTCT...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAACCGCTGCCCGGCTTCTaGGAAACTCAGCTGACGCTT +
Preference number: 5 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKPLPGF*ETQLTL
Trigger: AAGCGTCAGCTGAGTTTCCAAGAAGCCGGGCAGCGG...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp CAAAACGTCGCAGCTTCAAAGACCTTCCATGGAGGGCGATGGGCTGAGGACAATCAAAAGCTATCATTCTaGCTCAATGGAGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QNVAASKTFHGGRWAEDNQKLSF*LNGVRL
Trigger: CAGCCTGACTCCATTGAGCAAGAATGATAGCTTTTG...ATTGTCCTCAGCCCATCGCCCTCCATGGAAGGTCTTTGAAGCTGCGACGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp ATTCACTCCAATAAAACTGGCTATTGGCAGAGGGGAATCGAACGTCTGACTTGTCAAATCCTCGGCGGGTaGGAAGGCATTCTTTCCGGT +
Preference number: 5 (lower is better)
Translates to: IHSNKTGYWQRGIERLTCQILGG*EGILSG
Trigger: ACCGGAAAGAATGCCTTCCAACCCGCCGAGGATTTG...ACAAGTCAGACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATTGGAGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGAAGCCATCCAGAGGCTTaGTGCCATTGGTGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRSHPEA*CHWCVP
Trigger: GGGGACACACCAATGGCACAAAGCCTCTGGATGGCT...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp ATTCACTCCAATAAAACTGGCTATTGGCAGAGGGGAATCGAACGTCTGACTTGTAAGAGCCAGAGGGTCTaGGTTGGTGGGTCTGATGAG +
Preference number: 5 (lower is better)
Translates to: IHSNKTGYWQRGIERLTCKSQRV*VGGSDE
Trigger: CTCATCAGACCCACCAACCAAGACCCTCTGGCTCTT...ACAAGTCAGACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATTGGAGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAAGAGCCACCCGAGGCCTaGAGGGGCCCTTTCAGAACC +
Preference number: 5 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQEPPEA*RGPFRT
Trigger: GGTTCTGAAAGGGCCCCTCAAGGCCTCGGGTGGCTC...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGAGGAGTCAGGCTGCTCTaGGAGTTTCTGTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRGVRLL*EFLSWE
Trigger: CTCCCAGGACAGAAACTCCAAGAGCAGCCTGACTCC...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp CTGAAACCTGCTATTCTTGAGCTGGGATACCTGGAGTGGGATGAAGAGATGGCCTTTTTCCCTGCTGTTTaGTCCTCCATTCTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: LKPAILELGYLEWDEEMAFFPAV*SSILPA
Trigger: TGCTGGAAGAATGGAGGACAAAACAGCAGGGAAAAA...GGCCATCTCTTCATCCCACTCCAGGTATCCCAGCTCAAGAATAGCAGGTTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp CTAAGGCATGTGCCTCCCAACCTTGGGGGCTATTGCTCTACACTGTGGGGGTTATACTTTTTCTGTGACTaGGATGCTGTAGAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: LRHVPPNLGGYCSTLWGLYFFCD*DAVECS
Trigger: AGAACACTCTACAGCATCCAAGTCACAGAAAAAGTA...TAACCCCCACAGTGTAGAGCAATAGCCCCCAAGGTTGGGAGGCACATGCCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS TCA 90 bp GGACTGAGTGTTTATGGTAGAACTGTAGGCGGGACAGGAGCTTTGTaGCGATGTGAGGATATTCTCTGGACAGGTCATGTCTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: GLSVYGRTVGGTGAL*RCEDILWTGHVFLQ
Trigger: CTGAAGAAAGACATGACCTGTCCAGAGAATATCCTCACATCGTCACAAAGCTCCTGTCCCGCCTACAGTTCTACCATAAACACTCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264914.10
ENST00000521011.1
CDS-3UTR CAA 90 bp TTCATGCTGTCGGCCATACACTTCCAAGTGGGAGGTGATGGCAGTTTGGTCAGCATGCCTGTTCTTGTCTaGGATAAAGTCATATGGCTT +
Preference number: 5 (lower is better)
Translates to: FMLSAIHFQVGGDGSLVSMPVLV*DKVIWL
Trigger: AAGCCATATGACTTTATCCAAGACAAGAACAGGCAT...GCTGACCAAACTGCCATCACCTCCCACTTGGAAGTGTATGGCCGACAGCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp CAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTGCTTCAGCAAGGGGCTaGCCACAAAGCCCACCCCTC +
Preference number: 5 (lower is better)
Translates to: QTLFTGMLKSKLHVPYYCASARG*PQSPPL
Trigger: GAGGGGTGGGCTTTGTGGCAAGCCCCTTGCTGAAGC...ACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp GGAGGATGCAGAAGGAACATCTGGGCTCAGCTATTTCATGCTGTCGGCCATACAGTCTGCTCCCTTCATTaGCGTAAGAAATGTGATTCA +
Preference number: 5 (lower is better)
Translates to: GGCRRNIWAQLFHAVGHTVCSLH*RKKCDS
Trigger: TGAATCACATTTCTTACGCAAATGAAGGGAGCAGAC...TGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCATCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS TCA 90 bp TACTTTCAAGTTGCCCTGGGAGGATTTGGAGTGTTGCGTGGTCATTaGATAAATAGCTCATTCGCTTGTCCGGATATGACCCCACTCAGA +
Preference number: 5 (lower is better)
Translates to: YFQVALGGFGVLRGH*INSSFACPDMTPLR
Trigger: TCTGAGTGGGGTCATATCCGGACAAGCGAATGAGCTATTTATTCAATGACCACGCAACACTCCAAATCCTCCCAGGGCAACTTGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS CCA 90 bp GTCTTTCTTCAGGGTCCCGATCAATATCAAAGAGCCAGAGGGTCTTaGTTGGTGGGTCTGATGAGGGTATCTCAGAAACATTGTATTGAG +
Preference number: 5 (lower is better)
Translates to: VFLQGPDQYQRARGS*LVGLMRVSQKHCIE
Trigger: CTCAATACAATGTTTCTGAGATACCCTCATCAGACCCACCAACCAAGACCCTCTGGCTCTTTGATATTGATCGGGACCCTGAAGAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264914.10
ENST00000521011.1
CDS CCA 90 bp AGGGGCCCTTTCAGAACCTTGGGTCTGAAGTCATTTCTTATGCCCTaGGTTATCATCTTCAGTAGAAAGTTGGTGGTAGCTACAACAGCA +
Preference number: 5 (lower is better)
Translates to: RGPFRTLGLKSFLMP*VIIFSRKLVVATTA
Trigger: TGCTGTTGTAGCTACCACCAACTTTCTACTGAAGATGATAACCCAGGGCATAAGAAATGACTTCAGACCCAAGGTTCTGAAAGGGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp AAAGGTGGAGGAAAGCATCTGGGCCTACATTTTCCTGAAGATGGCTTTTCAAAAATTGCACGGTGCCCTTaGGAAGGTGCGGTTACTTTC +
Preference number: 5 (lower is better)
Translates to: KGGGKHLGLHFPEDGFSKIARCP*EGAVTF
Trigger: GAAAGTAACCGCACCTTCCAAAGGGCACCGTGCAAT...TTTTGAAAAGCCATCTTCAGGAAAATGTAGGCCCAGATGCTTTCCTCCACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp GGAGGATGCAGAAGGAACATCTGGGCTCAGCTATTTCATGCTGTCGGCCATACATATTTTTATATCCTGTaGCAACTTCTTCGCCATCTC +
Preference number: 5 (lower is better)
Translates to: GGCRRNIWAQLFHAVGHTYFYIL*QLLRHL
Trigger: GAGATGGCGAAGAAGTTGCAACAGGATATAAAAATA...TGTATGGCCGACAGCATGAAATAGCTGAGCCCAGATGTTCCTTCTGCATCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATAGCCATCCAGAGGCTTaGTGCCATTGGTGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHSHPEA*CHWCVP
Trigger: GGGGACACACCAATGGCACAAAGCCTCTGGATGGCT...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp ATTCACTCCAATAAAACTGGCTATTGGCAGAGGGGAATCGAACGTCTGACTTGTAAGACATTAGTGGGATaGAGAAAGGGCTGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: IHSNKTGYWQRGIERLTCKTLVG*RKGCRC
Trigger: ACACCTGCAGCCCTTTCTCAATCCCACTAATGTCTT...ACAAGTCAGACGTTCGATTCCCCTCTGCCAATAGCCAGTTTTATTGGAGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp TACAAATACAAGATTGAAATTTTCTTCCTGTACTCCAAGGGAACATCTTGCAACCCACGTTGTGAGAGGTaGAGCGGCCTGGCTGAACAC +
Preference number: 5 (lower is better)
Translates to: YKYKIEIFFLYSKGTSCNPRCER*SGLAEH
Trigger: GTGTTCAGCCAGGCCGCTCAACCTCTCACAACGTGG...GTTGCAAGATGTTCCCTTGGAGTACAGGAAGAAAATTTCAATCTTGTATTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATCAAATCCTCGGCGGGTaGGAAGGCATTCTTTCCGGT +
Preference number: 5 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHQILGG*EGILSG
Trigger: ACCGGAAAGAATGCCTTCCAACCCGCCGAGGATTTG...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATCCAGCTTCACGAGTGTaGGCAGCCAGTCAGAGATGT +
Preference number: 5 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHPASRV*AASQRC
Trigger: ACATCTCTGACTGGCTGCCAACACTCGTGAAGCTGG...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS GCA 90 bp TGCAGTGACATTTCCTACTGCTTCATCCATAAGGGACACCATTCCTaGATAGTGATGCCTGTTCTTGTCTTGGATAAAGTCATATGGCTT +
Preference number: 5 (lower is better)
Translates to: CSDISYCFIHKGHHS*IVMPVLVLDKVIWL
Trigger: AAGCCATATGACTTTATCCAAGACAAGAACAGGCATCACTATGCAGGAATGGTGTCCCTTATGGATGAAGCAGTAGGAAATGTCACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000565165.2
CDS-3UTR CAA 90 bp TCTGAGTCTGGGTCCTGTTCCCTGATGTATCTTCTTCACATCAGCCAGCTCTATTATTTTTATATCCTGTaGCAACTTCTTCGCCATCTC +
Preference number: 5 (lower is better)
Translates to: SESGSCSLMYLLHISQLYYFYIL*QLLRHL
Trigger: GAGATGGCGAAGAAGTTGCAACAGGATATAAAAATA...ATAGAGCTGGCTGATGTGAAGAAGATACATCAGGGAACAGGACCCAGACTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp ATTGAAGATTTGAAGGGTGGATACTTCATCTACAGAAGGCAGCAGCTATTTGATAAGATGAACACCGTGTaGTTCCAGAGCCCACTGCTT +
Preference number: 5 (lower is better)
Translates to: IEDLKGGYFIYRRQQLFDKMNTV*FQSPLL
Trigger: AAGCAGTGGGCTCTGGAACAACACGGTGTTCATCTT...ATCAAATAGCTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp TACAAATACAAGATTGAAATTTTCTTCCTGTACTCCAAGGGAACATCTTGCAACCCAGCTTCACGAGTGTaGGCAGCCAGTCAGAGATGT +
Preference number: 5 (lower is better)
Translates to: YKYKIEIFFLYSKGTSCNPASRV*AASQRC
Trigger: ACATCTCTGACTGGCTGCCAACACTCGTGAAGCTGG...GTTGCAAGATGTTCCCTTGGAGTACAGGAAGAAAATTTCAATCTTGTATTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp AAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTTGCCCTGGGAGGATTaGGAGTGTTGCGTGGTCATT +
Preference number: 5 (lower is better)
Translates to: KFQTLFTGMLKSKLHVPYLPWED*ECCVVI
Trigger: AATGACCACGCAACACTCCAAATCCTCCCAGGGCAA...ATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS TCA 90 bp CTGTTGCAACTTCTTCGCCATCTCGAAAATCAAGAGCACATCGTGTaGCATTCAGAGCGTCAATTAATGTACAGCGTTCATGGGAATAAT +
Preference number: 5 (lower is better)
Translates to: LLQLLRHLENQEHIV*HSERQLMYSVHGNN
Trigger: ATTATTCCCATGAACGCTGTACATTAATTGACGCTCTGAATGTCACACGATGTGCTCTTGATTTTCGAGATGGCGAAGAAGTTGCAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000565165.2
CDS-3UTR CAA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAAAAGATGAACACCGTGTaGTTCCAGAGCCCACTGCTT +
Preference number: 5 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQKMNTV*FQSPLL
Trigger: AAGCAGTGGGCTCTGGAACAACACGGTGTTCATCTT...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGAAGGGCTATAGCCCTTTaGGTGAATATGTTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRRAIAL*VNMFVE
Trigger: TTCAACAAACATATTCACCAAAAGGGCTATAGCCCT...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp GTATTTCCTATAACTAGAGACCTGAAACCTGCTATTCTTGAGCTGGGATACCTGATGCCTGTTCTTGTCTaGGATAAAGTCATATGGCTT +
Preference number: 5 (lower is better)
Translates to: VFPITRDLKPAILELGYLMPVLV*DKVIWL
Trigger: AAGCCATATGACTTTATCCAAGACAAGAACAGGCAT...CAGGTATCCCAGCTCAAGAATAGCAGGTTTCAGGTCTCTAGTTATAGGAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAACCCCGGCAATTAAATTaGCACTGTGGTTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQPRQLN*HCGFSL
Trigger: CAGACTGAAACCACAGTGCAAATTTAATTGCCGGGG...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp AAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATGGCCCTTTCAGAACCTaGGGTCTGAAGTCATTTCTT +
Preference number: 5 (lower is better)
Translates to: KFQTLFTGMLKSKLHVPYGPFRT*GLKSFL
Trigger: AAGAAATGACTTCAGACCCAAGGTTCTGAAAGGGCC...ATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp TTCCAAGCATTGGTGAACACAATGGTGGGGCTAATGCAGAAAAGAGTATCATTTAGGGCTATAGCCCTTTaGGTGAATATGTTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: FQALVNTMVGLMQKRVSFRAIAL*VNMFVE
Trigger: TTCAACAAACATATTCACCAAAAGGGCTATAGCCCT...AAATGATACTCTTTTCTGCATTAGCCCCACCATTGTGTTCACCAATGCTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS-3UTR CAA 90 bp TCATCTTGCTCATCTGTGTGTTCATTTGTCCAACATCTTTCTCCCCCAACTAGAAGGATCTTGACTGACTaGTTCATTCCTAATTTCTCA +
Preference number: 5 (lower is better)
Translates to: SSCSSVCSFVQHLSPPTRRILTD*FIPNFS
Trigger: TGAGAAATTAGGAATGAACAAGTCAGTCAAGATCCT...TCTAGTTGGGGGAGAAAGATGTTGGACAAATGAACACACAGATGAGCAAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAACAACTGGCAGTCATCTaGCTCATCTGTGTGTTCATT +
Preference number: 5 (lower is better)
Translates to: TFQARIRGNNLRLVRILKQLAVI*LICVFI
Trigger: AATGAACACACAGATGAGCAAGATGACTGCCAGTTG...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp TATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTAAGACAAAGGGCTATAGCCCTTTaGGTGAATATGTTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: YSLGCSKVSYMCHITVRQRAIAL*VNMFVE
Trigger: TTCAACAAACATATTCACCAAAAGGGCTATAGCCCT...TTGTCTTACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATGCCTGTTCTTGTCTaGGATAAAGTCATATGGCTT +
Preference number: 5 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHMPVLV*DKVIWL
Trigger: AAGCCATATGACTTTATCCAAGACAAGAACAGGCAT...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp ATTGAAGATTTGAAGGGTGGATACTTCATCTACAGAAGGCAGCAGCTATTTGATGATCTGTATTGGAACTaGGGAACAATAGAGATTGAA +
Preference number: 5 (lower is better)
Translates to: IEDLKGGYFIYRRQQLFDDLYWN*GTIEIE
Trigger: TTCAATCTCTATTGTTCCCAAGTTCCAATACAGATC...ATCAAATAGCTGCTGCCTTCTGTAGATGAAGTATCCACCCTTCAAATCTTCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAATGCAGTGGATCTGTATaGGAACTTGGGAACAATAGA +
Preference number: 5 (lower is better)
Translates to: TFQARIRGNNLRLVRILKCSGSV*ELGNNR
Trigger: TCTATTGTTCCCAAGTTCCAATACAGATCCACTGCA...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp CAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTGTAACACAAAGAACTTaGGTCTATGAAGGACACAAA +
Preference number: 5 (lower is better)
Translates to: QTLFTGMLKSKLHVPYYCVTQRT*VYEGHK
Trigger: TTTGTGTCCTTCATAGACCAAAGTTCTTTGTGTTAC...ACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp AAAAGTTCCAAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATACAAGTATAAAGGGCTaGCATTTTATTTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: KSSKHYSLGCSKVSYMCHTSIKG*HFISTR
Trigger: CCTTGTGGAAATAAAATGCAAGCCCTTTATACTTGT...ATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTTGGAACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAATCACAACATACTTTTTaGCCTTCCTGGCACTTATCA +
Preference number: 5 (lower is better)
Translates to: TFQARIRGNNLRLVRILKSQHTF*PSWHLS
Trigger: TGATAAGTGCCAGGAAGGCAAAAAAGTATGTTGTGA...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp AAACATTATTCACTGGGATGCTCAAAAGTAAGCTACATGTGCCATATTACTGTATATTTTTATATCCTGTaGCAACTTCTTCGCCATCTC +
Preference number: 5 (lower is better)
Translates to: KHYSLGCSKVSYMCHITVYFYIL*QLLRHL
Trigger: GAGATGGCGAAGAAGTTGCAACAGGATATAAAAATA...TACAGTAATATGGCACATGTAGCTTACTTTTGAGCATCCCAGTGAATAATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS-3UTR CAA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAAAATTTTGCAGTCCATTaGAATTCTCTCTGTGCACAT +
Preference number: 5 (lower is better)
Translates to: TFQARIRGNNLRLVRILKNFAVH*NSLCAH
Trigger: ATGTGCACAGAGAGAATTCAAATGGACTGCAAAATT...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS-3UTR CAA 90 bp ACTTTTCAGGCAAGAATAAGAGGGAACAATTTGAGGCTAGTGAGGATTTTAAAAATAGAGATTGAAGATTaGAAGGGTGGATACTTCATC +
Preference number: 5 (lower is better)
Translates to: TFQARIRGNNLRLVRILKIEIED*KGGYFI
Trigger: GATGAAGTATCCACCCTTCAAATCTTCAATCTCTAT...TTTTAAAATCCTCACTAGCCTCAAATTGTTCCCTCTTATTCTTGCCTGAAAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565165.2
CDS GCA 72 bp GCACCCCGCCGGCCGCCAGCGCGTCCAGGTGCGGCGTaGGGATGCGGGAGCCGTGGAAGCCGACGTCGTTCC +
Preference number: 6 (lower is better)
Translates to: APRRPPARPGAA*GCGSRGSRRRS
Trigger: GGAACGACGTCGGCTTCCACGGCTCCCGCATCCGCACGCCGCACCTGGACGCGCTGGCGGCCGGCGGGGTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000565165.2
CDS CCA 72 bp TTCCAGCCTAGGTCGTCTGCCAGCAAGAAGACCAGGTaGGGCGGCCGGCTGGCCCCGGCGCCCGAGCCCGGC +
Preference number: 6 (lower is better)
Translates to: FQPRSSASKKTR*GGRLAPAPEPG
Trigger: GCCGGGCTCGGGCGCCGGGGCCAGCCGGCCGCCCCACCTGGTCTTCTTGCTGGCAGACGACCTAGGCTGGAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000565165.2
CDS CAA 72 bp CAGAGACGAACCCGCGGGCGCCCGCTGCCCGGCTTCTaGGAAACTCAGCTGACGCTTGGAGGGCACCAAGGC +
Preference number: 6 (lower is better)
Translates to: QRRTRGRPLPGF*ETQLTLGGHQG
Trigger: GCCTTGGTGCCCTCCAAGCGTCAGCTGAGTTTCCAAGAAGCCGGGCAGCGGGCGCCCGCGGGTTCGTCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396151.7
ENST00000521117.1
CDS CAA 90 bp AGGAGGAGCCAGAGACGAACCCGCGGGCGCCCGCTGCCCGGCTTCTaGGAAACTCAGCTGACGCTTGGAGGGCACCAAGGCCCGTTATCT +
Preference number: 6 (lower is better)
Translates to: RRSQRRTRGRPLPGF*ETQLTLGGHQGPLS
Trigger: AGATAACGGGCCTTGGTGCCCTCCAAGCGTCAGCTGAGTTTCCAAGAAGCCGGGCAGCGGGCGCCCGCGGGTTCGTCTCTGGCTCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396151.7
ENST00000521117.1
CDS CCA 72 bp CCCGCTGCCCGGCTTCTTGGAAACTCAGCTGACGCTTaGAGGGCACCAAGGCCCGTTATCTTCCCCGGCAAT +
Preference number: 6 (lower is better)
Translates to: PAARLLGNSADA*RAPRPVIFPGN
Trigger: ATTGCCGGGGAAGATAACGGGCCTTGGTGCCCTCCAAGCGTCAGCTGAGTTTCCAAGAAGCCGGGCAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396151.7
ENST00000521117.1
CDS CCA 72 bp GCCATTGGTGTGTCCCCTGGCCAGCTTCACGAGTGTTaGCAGCCAGTCAGAGATGTGGATGAGCTCCCGGTT +
Preference number: 6 (lower is better)
Translates to: AIGVSPGQLHEC*QPVRDVDELPV
Trigger: AACCGGGAGCTCATCCACATCTCTGACTGGCTGCCAACACTCGTGAAGCTGGCCAGGGGACACACCAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000521800.2
ENST00000565165.2
CDS GCA 72 bp AGCCATGCTGTTCCTGGGACCCAAGCAGGACTTCTGTaGTCCTGGGGTTTTCATGCAGGGTGTGTCGGTGGT +
Preference number: 6 (lower is better)
Translates to: SHAVPGTQAGLL*SWGFHAGCVGG
Trigger: ACCACCGACACACCCTGCATGAAAACCCCAGGAGCACAGAAGTCCTGCTTGGGTCCCAGGAACAGCATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521011.1
CDS CCA 72 bp GCCAGCTTCACGAGTGTTGGCAGCCAGTCAGAGATGTaGATGAGCTCCCGGTTCTTCACGCCCTTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: ASFTSVGSQSEM*MSSRFFTPFCF
Trigger: GAAGCAGAAGGGCGTGAAGAACCGGGAGCTCATCCACATCTCTGACTGGCTGCCAACACTCGTGAAGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000521800.2
ENST00000565165.2
CDS CCA 72 bp TCCACACGTCGAAGCCATCCAGAGGCTTTGTGCCATTaGTGTGTCCCCTGGCCAGCTTCACGAGTGTTGGCA +
Preference number: 6 (lower is better)
Translates to: STRRSHPEALCH*CVPWPASRVLA
Trigger: TGCCAACACTCGTGAAGCTGGCCAGGGGACACACCAATGGCACAAAGCCTCTGGATGGCTTCGACGTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000521800.2
ENST00000565165.2
CDS TCA 72 bp GCTTCACGAGTGTTGGCAGCCAGTCAGAGATGTGGATaGGCTCCCGGTTCTTCACGCCCTTCTGCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: ASRVLAASQRCG*APGSSRPSASA
Trigger: TGCTGAAGCAGAAGGGCGTGAAGAACCGGGAGCTCATCCACATCTCTGACTGGCTGCCAACACTCGTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000521800.2
ENST00000565165.2
CDS GCA 72 bp TGGTTTTCCACACGTCGAAGCCATCCAGAGGCTTTGTaGCATTGGTGTGTCCCCTGGCCAGCTTCACGAGTG +
Preference number: 6 (lower is better)
Translates to: WFSTRRSHPEAL*HWCVPWPASRV
Trigger: CACTCGTGAAGCTGGCCAGGGGACACACCAATGGCACAAAGCCTCTGGATGGCTTCGACGTGTGGAAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000521800.2
ENST00000565165.2
CDS CCA 72 bp GCTGTTCCTGGGACCCAAGCAGGACTTCTGTGCTCCTaGGGTTTTCATGCAGGGTGTGTCGGTGGTGGAAAA +
Preference number: 6 (lower is better)
Translates to: AVPGTQAGLLCS*GFHAGCVGGGK
Trigger: TTTTCCACCACCGACACACCCTGCATGAAAACCCCAGGAGCACAGAAGTCCTGCTTGGGTCCCAGGAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521011.1
CDS CAA 72 bp GCACGGTGCCCTTTGGAAGGTGCGGTTACTTTCAAGTaGCCCTGGGAGGATTTGGAGTGTTGCGTGGTCATT +
Preference number: 6 (lower is better)
Translates to: ARCPLEGAVTFK*PWEDLECCVVI
Trigger: AATGACCACGCAACACTCCAAATCCTCCCAGGGCAACTTGAAAGTAACCGCACCTTCCAAAGGGCACCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS GCA 72 bp ATTCTGGAAGAGAAGAGTCATCCTTTGCTGGAGCCATaGTGTTCCTGGGACCCAAGCAGGACTTCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: ILEEKSHPLLEP*CSWDPSRTSVL
Trigger: GAGCACAGAAGTCCTGCTTGGGTCCCAGGAACAGCATGGCTCCAGCAAAGGATGACTCTTCTCTTCCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521011.1
CDS CCA 72 bp GCTGGGGCAGGAGTTTTTCATCCAGAGGAACACAGCTaGGCTGACAGGGCCAGATTATTTGGTGCTGTAAAC +
Preference number: 6 (lower is better)
Translates to: AGAGVFHPEEHS*ADRARLFGAVN
Trigger: GTTTACAGCACCAAATAATCTGGCCCTGTCAGCCCAGCTGTGTTCCTCTGGATGAAAAACTCCTGCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000565165.2
CDS CAA 72 bp TTGCACTGTGGTTTCAGTCTGATTGCACGGTGCCCTTaGGAAGGTGCGGTTACTTTCAAGTTGCCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: LHCGFSLIARCP*EGAVTFKLPWE
Trigger: CTCCCAGGGCAACTTGAAAGTAACCGCACCTTCCAAAGGGCACCGTGCAATCAGACTGAAACCACAGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS CAA 72 bp GGCACCAAGGCCCGTTATCTTCCCCGGCAATTAAATTaGCACTGTGGTTTCAGTCTGATTGCACGGTGCCCT +
Preference number: 6 (lower is better)
Translates to: GTKARYLPRQLN*HCGFSLIARCP
Trigger: AGGGCACCGTGCAATCAGACTGAAACCACAGTGCAAATTTAATTGCCGGGGAAGATAACGGGCCTTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS GCA 72 bp CACGGTGAAGAGTCCACGAAGTTCGGGTCAATATTATaGAGCAGCTCAATTCTGGGGGATGGGCTTCCTTCA +
Preference number: 6 (lower is better)
Translates to: HGEESTKFGSIL*SSSILGDGLPS
Trigger: TGAAGGAAGCCCATCCCCCAGAATTGAGCTGCTGCATAATATTGACCCGAACTTCGTGGACTCTTCACCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS GCA 72 bp ATTCTGGAAGAGAAGAGTCATCCTTTGCTGGAGCCATaGTGTTCCTGGGACACGGTGAAGAGTCCACGAAGT +
Preference number: 6 (lower is better)
Translates to: ILEEKSHPLLEP*CSWDTVKSPRS
Trigger: ACTTCGTGGACTCTTCACCGTGTCCCAGGAACAGCATGGCTCCAGCAAAGGATGACTCTTCTCTTCCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264914.10
CDS GCA 72 bp TACGGTGAAGAGTCCACGAAGTTCGGGTCAATATTATaGAGCAGCTCAATTCTGGGGGATGGGCTTCCTTCA +
Preference number: 6 (lower is better)
Translates to: YGEESTKFGSIL*SSSILGDGLPS
Trigger: TGAAGGAAGCCCATCCCCCAGAATTGAGCTGCTGCATAATATTGACCCGAACTTCGTGGACTCTTCACCGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS CCA 72 bp CAGGGTCCCGATCAATATCAAAGAGCCAGAGGGTCTTaGTTGGTGGGTCTGATGAGGGTATCTCAGAAACAT +
Preference number: 6 (lower is better)
Translates to: QGPDQYQRARGS*LVGLMRVSQKH
Trigger: ATGTTTCTGAGATACCCTCATCAGACCCACCAACCAAGACCCTCTGGCTCTTTGATATTGATCGGGACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264914.10
ENST00000521011.1
CDS CAA 72 bp TCAGGGTCCCGATCAATATCAAAGAGCCAGAGGGTCTaGGTTGGTGGGTCTGATGAGGGTATCTCAGAAACA +
Preference number: 6 (lower is better)
Translates to: SGSRSISKSQRV*VGGSDEGISET
Trigger: TGTTTCTGAGATACCCTCATCAGACCCACCAACCAAGACCCTCTGGCTCTTTGATATTGATCGGGACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264914.10
ENST00000521011.1
CDS CAA 90 bp CTGAAGTCATTTCTTATGCCCTGGGTTATCATCTTCAGTAGAAAGTaGGTGGTAGCTACAACAGCAGCGAGCACTCAGGCCAGTACGGTG +
Preference number: 6 (lower is better)
Translates to: LKSFLMPWVIIFSRK*VVATTAASTQASTV
Trigger: CACCGTACTGGCCTGAGTGCTCGCTGCTGTTGTAGCTACCACCAACTTTCTACTGAAGATGATAACCCAGGGCATAAGAAATGACTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS TCA 72 bp GTTTATGGTAGAACTGTAGGCGGGACAGGAGCTTTGTaGCGATGTGAGGATATTCTCTGGACAGGTCATGTC +
Preference number: 6 (lower is better)
Translates to: VYGRTVGGTGAL*RCEDILWTGHV
Trigger: GACATGACCTGTCCAGAGAATATCCTCACATCGTCACAAAGCTCCTGTCCCGCCTACAGTTCTACCATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264914.10
ENST00000521011.1
CDS TCA 72 bp GTTGCCCTGGGAGGATTTGGAGTGTTGCGTGGTCATTaGATAAATAGCTCATTCGCTTGTCCGGATATGACC +
Preference number: 6 (lower is better)
Translates to: VALGGFGVLRGH*INSSFACPDMT
Trigger: GGTCATATCCGGACAAGCGAATGAGCTATTTATTCAATGACCACGCAACACTCCAAATCCTCCCAGGGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS CAA 90 bp CAATTAAATTTGCACTGTGGTTTCAGTCTGATTGCACGGTGCCCTTaGGAAGGTGCGGTTACTTTCAAGTTGCCCTGGGAGGATTTGGAG +
Preference number: 6 (lower is better)
Translates to: QLNLHCGFSLIARCP*EGAVTFKLPWEDLE
Trigger: CTCCAAATCCTCCCAGGGCAACTTGAAAGTAACCGCACCTTCCAAAGGGCACCGTGCAATCAGACTGAAACCACAGTGCAAATTTAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS CAA 90 bp TTTCTTCAGGGTCCCGATCAATATCAAAGAGCCAGAGGGTCTTGGTaGGTGGGTCTGATGAGGGTATCTCAGAAACATTGTATTGAGACG +
Preference number: 6 (lower is better)
Translates to: FLQGPDQYQRARGSW*VGLMRVSQKHCIET
Trigger: CGTCTCAATACAATGTTTCTGAGATACCCTCATCAGACCCACCAACCAAGACCCTCTGGCTCTTTGATATTGATCGGGACCCTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264914.10
ENST00000521011.1
CDS GCA 72 bp TTAAATTTGCACTGTGGTTTCAGTCTGATTGCACGGTaGCCTTTGGAAGGTGCGGTTACTTTCAAGTTGCCC +
Preference number: 6 (lower is better)
Translates to: LNLHCGFSLIAR*PLEGAVTFKLP
Trigger: GGGCAACTTGAAAGTAACCGCACCTTCCAAAGGGCACCGTGCAATCAGACTGAAACCACAGTGCAAATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS CAA 90 bp ATCCATAAGGGACACCATTCCTGCATAGTGATGCCTGTTCTTGTCTaGGATAAAGTCATATGGCTTCAAGTATTCCTCAGGGACCTGAAG +
Preference number: 6 (lower is better)
Translates to: IHKGHHSCIVMPVLV*DKVIWLQVFLRDLK
Trigger: CTTCAGGTCCCTGAGGAATACTTGAAGCCATATGACTTTATCCAAGACAAGAACAGGCATCACTATGCAGGAATGGTGTCCCTTATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000565165.2
CDS CAA 72 bp GGACACCATTCCTGCATAGTGATGCCTGTTCTTGTCTaGGATAAAGTCATATGGCTTCAAGTATTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: GHHSCIVMPVLV*DKVIWLQVFLR
Trigger: CCTGAGGAATACTTGAAGCCATATGACTTTATCCAAGACAAGAACAGGCATCACTATGCAGGAATGGTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000565165.2
CDS TCA 72 bp CTTCTTCGCCATCTCGAAAATCAAGAGCACATCGTGTaGCATTCAGAGCGTCAATTAATGTACAGCGTTCAT +
Preference number: 6 (lower is better)
Translates to: LLRHLENQEHIV*HSERQLMYSVH
Trigger: ATGAACGCTGTACATTAATTGACGCTCTGAATGTCACACGATGTGCTCTTGATTTTCGAGATGGCGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264914.10
ENST00000396151.7
ENST00000565165.2
CDS CCA 72 bp TTCAGAACCTTGGGTCTGAAGTCATTTCTTATGCCCTaGGTTATCATCTTCAGTAGAAAGTTGGTGGTAGCT +
Preference number: 6 (lower is better)
Translates to: FRTLGLKSFLMP*VIIFSRKLVVA
Trigger: AGCTACCACCAACTTTCTACTGAAGATGATAACCCAGGGCATAAGAAATGACTTCAGACCCAAGGTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396151.7
CDS CAA 72 bp GAATACAGCTTCCTGAGAGGCAGGATCTTGACTGACTaGTTCATTCCTAATTTCTCAGCATCTGATGGTTTT +
Preference number: 6 (lower is better)
Translates to: EYSFLRGRILTD*FIPNFSASDGF
Trigger: AAAACCATCAGATGCTGAGAAATTAGGAATGAACAAGTCAGTCAAGATCCTGCCTCTCAGGAAGCTGTATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521800.2