RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARSA (Homo sapiens)

Ensembl gene IDs: ENSG00000100299

Ensembl transcript IDs: ENST00000216124.10, ENST00000356098.9, ENST00000395619.3, ENST00000395621.7, ENST00000453344.6, ENST00000551731.1, ENST00000608497.1

Found 417 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCCACCTGGGCATGCACGTGGGCCTGACGTCAGTGTGCCATGCTaGACAGACACGGGCAGGTGCTCAGACAGTCCCTCCCTGCAGAGG +
Preference number: 1 (lower is better)
Translates to: WPPGHARGPDVSVPC*TDTGRCSDSPSLQR
Trigger: CCTCTGCAGGGAGGGACTGTCTGAGCACCTGCCCGTGTCTGTGCAGCATGGCACACTGACGTCAGGCCCACGTGCATGCCCAGGTGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR GCA 90 bp GACTGGCCACCTGGGCATGCACGTGGGCCTGACGTCAGTGTGCCATaGTGCACAGACACGGGCAGGTGCTCAGACAGTCCCTCCCTGCAG +
Preference number: 1 (lower is better)
Translates to: DWPPGHARGPDVSVP*CTDTGRCSDSPSLQ
Trigger: CTGCAGGGAGGGACTGTCTGAGCACCTGCCCGTGTCTGTGCAGCATGGCACACTGACGTCAGGCCCACGTGCATGCCCAGGTGGCCAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR GCA 90 bp CGTGTGACTGGCCACCTGGGCATGCACGTGGGCCTGACGTCAGTGTaGCATGCTGCACAGACACGGGCAGGTGCTCAGACAGTCCCTCCC +
Preference number: 1 (lower is better)
Translates to: RVTGHLGMHVGLTSV*HAAQTRAGAQTVPP
Trigger: GGGAGGGACTGTCTGAGCACCTGCCCGTGTCTGTGCAGCATGGCACACTGACGTCAGGCCCACGTGCATGCCCAGGTGGCCAGTCACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR CCA 90 bp CGGGCAGGTGCTCAGACAGTCCCTCCCTGCAGAGGAGGCCAACAATaGAGGCAGAGCGTTGCCGTTGAAGGGAACAGCCAGGCCACCCCC +
Preference number: 1 (lower is better)
Translates to: RAGAQTVPPCRGGQQ*RQSVAVEGNSQATP
Trigger: GGGGGTGGCCTGGCTGTTCCCTTCAACGGCAACGCTCTGCCTCCATTGTTGGCCTCCTCTGCAGGGAGGGACTGTCTGAGCACCTGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR TCA 90 bp TGGAGACACTGGGTTAGCAGCTGCCCAGTGTCCAATCAGGGCCTGTaGCGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTT +
Preference number: 1 (lower is better)
Translates to: WRHWVSSCPVSNQGL*RLRKVLTPRAAPVV
Trigger: AACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGCAGCTGCTAACCCAGTGTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR GCA 90 bp CAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTaGCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCC +
Preference number: 1 (lower is better)
Translates to: QSGPVTAAQGPHPQG*PSRSLPGLLVTGYS
Trigger: GGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR GCA 90 bp ACTGGGTTAGCAGCTGCCCAGTGTCCAATCAGGGCCTGTGACGGCTaGGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACC +
Preference number: 1 (lower is better)
Translates to: TGLAAAQCPIRACDG*ARSSPPGLPQSFTT
Trigger: GGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGCAGCTGCTAACCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR CCA 90 bp GCTCCTCTCACTTGGCCAACACTGAGGGAGCACCTGGCGTGTGACTaGCCACCTGGGCATGCACGTGGGCCTGACGTCAGTGTGCCATGC +
Preference number: 1 (lower is better)
Translates to: APLTWPTLREHLACD*PPGHARGPDVSVPC
Trigger: GCATGGCACACTGACGTCAGGCCCACGTGCATGCCCAGGTGGCCAGTCACACGCCAGGTGCTCCCTCAGTGTTGGCCAAGTGAGAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR TCA 90 bp GTGTCTGAACGCCCGGAAGGTGTGCTCCTCTCACTTGGCCAACACTaGGGGAGCACCTGGCGTGTGACTGGCCACCTGGGCATGCACGTG +
Preference number: 1 (lower is better)
Translates to: VSERPEGVLLSLGQH*GSTWRVTGHLGMHV
Trigger: CACGTGCATGCCCAGGTGGCCAGTCACACGCCAGGTGCTCCCTCAGTGTTGGCCAAGTGAGAGGAGCACACCTTCCGGGCGTTCAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR GCA 90 bp TGCCATGCTGCACAGACACGGGCAGGTGCTCAGACAGTCCCTCCCTaGAGAGGAGGCCAACAATGGAGGCAGAGCGTTGCCGTTGAAGGG +
Preference number: 1 (lower is better)
Translates to: CHAAQTRAGAQTVPP*RGGQQWRQSVAVEG
Trigger: CCCTTCAACGGCAACGCTCTGCCTCCATTGTTGGCCTCCTCTGCAGGGAGGGACTGTCTGAGCACCTGCCCGTGTCTGTGCAGCATGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR TCA 90 bp ACAGATGTGCCCATGTCCTTGAGGCTGACGTGTGCCTGTGTGCACTaGCCCACGCAGATCACCAAGGCGCCAGGGCAGCTTCCAGAGCCA +
Preference number: 1 (lower is better)
Translates to: TDVPMSLRLTCACVH*PTQITKAPGQLPEP
Trigger: TGGCTCTGGAAGCTGCCCTGGCGCCTTGGTGATCTGCGTGGGTCAGTGCACACAGGCACACGTCAGCCTCAAGGACATGGGCACATCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR GCA 90 bp GCTGCTCCTGTGAACAGATGTGCCCATGTCCTTGAGGCTGACGTGTaGCTGTGTGCACTGACCCACGCAGATCACCAAGGCGCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: AAPVNRCAHVLEADV*LCALTHADHQGARA
Trigger: TGCCCTGGCGCCTTGGTGATCTGCGTGGGTCAGTGCACACAGGCACACGTCAGCCTCAAGGACATGGGCACATCTGTTCACAGGAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR TCA 90 bp TGGCTGTTTGGTAGCAACGAACGGTGTCTGCCACGGGGAGGTGTCTaGACGCCCGGAAGGTGTGCTCCTCTCACTTGGCCAACACTGAGG +
Preference number: 1 (lower is better)
Translates to: WLFGSNERCLPRGGV*TPGRCAPLTWPTLR
Trigger: CCTCAGTGTTGGCCAAGTGAGAGGAGCACACCTTCCGGGCGTTCAGACACCTCCCCGTGGCAGACACCGTTCGTTGCTACCAAACAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR TCA 90 bp TGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCTaGACCAATCACTGGATTGACTGGCTCAGGCTGGTCACCGCCCTC +
Preference number: 1 (lower is better)
Translates to: CPSRSLPGLLVTGYS*TNHWIDWLRLVTAL
Trigger: GAGGGCGGTGACCAGCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR CCA 90 bp GTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTaGTCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCA +
Preference number: 1 (lower is better)
Translates to: VLTPRAAPVVHYQDS*SQATPEPITGLTGS
Trigger: TGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR CCA 90 bp GACCTTTGCCCAGCACTGAAAAATGGGAGCCCATTAGGAAGGAGGTaGCTGTTTGGTAGCAACGAACGGTGTCTGCCACGGGGAGGTGTC +
Preference number: 1 (lower is better)
Translates to: DLCPALKNGSPLGRR*LFGSNERCLPRGGV
Trigger: GACACCTCCCCGTGGCAGACACCGTTCGTTGCTACCAAACAGCCACCTCCTTCCTAATGGGCTCCCATTTTTCAGTGCTGGGCAAAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR CCA 90 bp CCAGAGCCACGACACCAGGGTTCAAATCCCAGCCCAACCTCTTTCTaGCTGGGTGATCTTGTACAAGTCCTGAACCTCTCTGCACCTCAG +
Preference number: 1 (lower is better)
Translates to: PEPRHQGSNPSPTSF*LGDLVQVLNLSAPQ
Trigger: CTGAGGTGCAGAGAGGTTCAGGACTTGTACAAGATCACCCAGCCAGAAAGAGGTTGGGCTGGGATTTGAACCCTGGTGTCGTGGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR CCA 90 bp TCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCAGGCTaGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGAT +
Preference number: 1 (lower is better)
Translates to: SQATPEPITGLTGSG*SPPSLERKRLQLQD
Trigger: ATCTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR CCA 90 bp CGTACCACAGGGGACCGGCACCAGCACACAGCATTACCCCAGGATTaGACGAATTGTCACATCTGCAAGTCTCCACTGGTGTTATTACGT +
Preference number: 1 (lower is better)
Translates to: RTTGDRHQHTALPQD*TNCHICKSPLVLLR
Trigger: ACGTAATAACACCAGTGGAGACTTGCAGATGTGACAATTCGTCCAATCCTGGGGTAATGCTGTGTGCTGGTGCCGGTCCCCTGTGGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR GCA 90 bp CACCAGCACACAGCATTACCCCAGGATTGGACGAATTGTCACATCTaGAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCC +
Preference number: 1 (lower is better)
Translates to: HQHTALPQDWTNCHI*KSPLVLLRYQAQTP
Trigger: GGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGACAATTCGTCCAATCCTGGGGTAATGCTGTGTGCTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR TCA 90 bp CCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCAGGCGGAGGTTGCAGTaGGCGGAGATGGTACCACTG +
Preference number: 2 (lower is better)
Translates to: PPGLPQSFTTRTPGHRLLRRRLQ*AEMVPL
Trigger: CAGTGGTACCATCTCCGCTCACTGCAACCTCCGCCT...GAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR-3UTR TCA 90 bp TGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCGTCACAGGCTACTCCTaGACCAATCACTGGATTGAC +
Preference number: 2 (lower is better)
Translates to: CPIRACDGCARSSPPGLPVTGYS*TNHWID
Trigger: GTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGAC...GGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR-3UTR GCA 90 bp TGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCTCCCCGAGGCTGGAGTaGAGTGGTACAATTATAGCT +
Preference number: 2 (lower is better)
Translates to: CPIRACDGCARSSPPGLPSPRLE*SGTIIA
Trigger: AGCTATAATTGTACCACTGCACTCCAGCCTCGGGGA...GGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR TCA 90 bp GTGCTCAGACAGTCCCTCCCTGCAGAGGAGGCCAACAATGGAGGCAGAGCGTTGTGTGCCTGTGTGCACTaGCCCACGCAGATCACCAAG +
Preference number: 2 (lower is better)
Translates to: VLRQSLPAEEANNGGRALCACVH*PTQITK
Trigger: CTTGGTGATCTGCGTGGGTCAGTGCACACAGGCACA...CAACGCTCTGCCTCCATTGTTGGCCTCCTCTGCAGGGAGGGACTGTCTGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR TCA 90 bp CTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGATCAGCATGCACGTGGGCCTaGCGTCAGTGTGCCATGCTG +
Preference number: 2 (lower is better)
Translates to: LRLVTALLGEKEAATPRSACTWA*RQCAML
Trigger: CAGCATGGCACACTGACGTCAGGCCCACGTGCATGC...TGATCTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR GCA 90 bp CTGGCTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGCGGAGATGGTACCACTaGACTCTAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: LAQAGHRPPWRERGCNSKRRWYH*TLAWAT
Trigger: TGTCGCCCAGGCTAGAGTGCAGTGGTACCATCTCCG...CTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR TCA 90 bp CTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGATCAAGGCGGAGGTTGCAGTaGGCGGAGATGGTACCACTG +
Preference number: 2 (lower is better)
Translates to: LRLVTALLGEKEAATPRSRRRLQ*AEMVPL
Trigger: CAGTGGTACCATCTCCGCTCACTGCAACCTCCGCCT...TGATCTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR-3UTR GCA 90 bp CTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGATCAACAGACACGGGCAGGTaGTCAGACAGTCCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: LRLVTALLGEKEAATPRSTDTGR*SDSPSL
Trigger: CAGGGAGGGACTGTCTGAGCACCTGCCCGTGTCTGT...TGATCTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR GCA 90 bp GGATTGACTGGCTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAAAACGCCCGGAAGGTGTaGTCCTCTCACTTGGCCAAC +
Preference number: 2 (lower is better)
Translates to: GLTGSGWSPPSLERKRLQNARKV*SSHLAN
Trigger: GTTGGCCAAGTGAGAGGAGCACACCTTCCGGGCGTT...TTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAGCCAGTCAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR TCA 90 bp GACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCAGGCTCACTTGGCCAACACTaGGGGAGCACCTGGCGTGTG +
Preference number: 2 (lower is better)
Translates to: DSWSQATPEPITGLTGSGSLGQH*GSTWRV
Trigger: CACACGCCAGGTGCTCCCTCAGTGTTGGCCAAGTGA...GCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR GCA 90 bp CTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGATCACAGACAGTCCCTCCCTaGAGAGGAGGCCAACAATGG +
Preference number: 2 (lower is better)
Translates to: LRLVTALLGEKEAATPRSQTVPP*RGGQQW
Trigger: CCATTGTTGGCCTCCTCTGCAGGGAGGGACTGTCTG...TGATCTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR CCA 90 bp TATCCCGTCTCTCTCAGGCACTTTGCATCTTCTGAGTCTTCTGGCCCTCACACCCTCCCACCCCGTTCCTaGCACTCAAAGGCACGTGGC +
Preference number: 2 (lower is better)
Translates to: YPVSLRHFASSESSGPHTLPPRS*HSKARG
Trigger: GCCACGTGCCTTTGAGTGCCAGGAACGGGGTGGGAG...GGTGTGAGGGCCAGAAGACTCAGAAGATGCAAAGTGCCTGAGAGAGACGGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR CAA 90 bp TACCAGGACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATaGACTGGCTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGG +
Preference number: 2 (lower is better)
Translates to: YQDSWSQATPEPITG*TGSGWSPPSLERKR
Trigger: CCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTCCTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR-3UTR TCA 90 bp GACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCAGGCCCTAGTGGGCTGAAGTaGTTCTCCCACCTCAACCTC +
Preference number: 2 (lower is better)
Translates to: DSWSQATPEPITGLTGSGPSGLK*FSHLNL
Trigger: GAGGTTGAGGTGGGAGAATCACTTCAGCCCACTAGG...GCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR CCA 90 bp CTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGATCACCCAGCACTGAAAAATaGGAGCCCATTAGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: LRLVTALLGEKEAATPRSPSTEK*EPIRKE
Trigger: CTCCTTCCTAATGGGCTCCCATTTTTCAGTGCTGGG...TGATCTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR CCA 90 bp TATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACACTGGGTTAGCGGTCACCGCCCTCCTTaGAGAGAAAGAGGCTGCAAC +
Preference number: 2 (lower is better)
Translates to: YFLTLGALQVGSWRHWVSGHRPP*RERGCN
Trigger: GTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACC...GCTAACCCAGTGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR CAA 90 bp TCGTACCACAGGGGACCGGCACCAGCACACAGCATTACCCCAGGATaGGACGAATTGTCACATCTGCAAGTCTCCACTGGTGTTATTACG +
Preference number: 2 (lower is better)
Translates to: SYHRGPAPAHSITPG*DELSHLQVSTGVIT
Trigger: CGTAATAACACCAGTGGAGACTTGCAGATGTGACAATTCGTCCAATCCTGGGGTAATGCTGTGTGCTGGTGCCGGTCCCCTGTGGTACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR CCA 90 bp TATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACACTGGGTTAGCAATCACTGGATTGACTaGCTCAGGCTGGTCACCGCC +
Preference number: 2 (lower is better)
Translates to: YFLTLGALQVGSWRHWVSNHWID*LRLVTA
Trigger: GGCGGTGACCAGCCTGAGCCAGTCAATCCAGTGATT...GCTAACCCAGTGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR CAA 90 bp AGGGGACCGGCACCAGCACACAGCATTACCCCAGGATTGGACGAATaGTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGC +
Preference number: 2 (lower is better)
Translates to: RGPAPAHSITPGLDE*SHLQVSTGVITLSG
Trigger: GCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGACAATTCGTCCAATCCTGGGGTAATGCTGTGTGCTGGTGCCGGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR TCA 72 bp CGCCCGGAAGGTGTGCTCCTCTCACTTGGCCAACACTaGGGGAGCACCTGGCGTGTGACTGGCCACCTGGGC +
Preference number: 3 (lower is better)
Translates to: RPEGVLLSLGQH*GSTWRVTGHLG
Trigger: GCCCAGGTGGCCAGTCACACGCCAGGTGCTCCCTCAGTGTTGGCCAAGTGAGAGGAGCACACCTTCCGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR TCA 72 bp TGGGTTAGCAGCTGCCCAGTGTCCAATCAGGGCCTGTaGCGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCC +
Preference number: 3 (lower is better)
Translates to: WVSSCPVSNQGL*RLRKVLTPRAA
Trigger: GGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGCAGCTGCTAACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR GCA 72 bp CCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTaGCCCAGTCGTTCACTACCAGGACTCCTGGTCACA +
Preference number: 3 (lower is better)
Translates to: PVTAAQGPHPQG*PSRSLPGLLVT
Trigger: TGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR GCA 72 bp GCACAGACACGGGCAGGTGCTCAGACAGTCCCTCCCTaGAGAGGAGGCCAACAATGGAGGCAGAGCGTTGCC +
Preference number: 3 (lower is better)
Translates to: AQTRAGAQTVPP*RGGQQWRQSVA
Trigger: GGCAACGCTCTGCCTCCATTGTTGGCCTCCTCTGCAGGGAGGGACTGTCTGAGCACCTGCCCGTGTCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR CCA 72 bp ACTTGGCCAACACTGAGGGAGCACCTGGCGTGTGACTaGCCACCTGGGCATGCACGTGGGCCTGACGTCAGT +
Preference number: 3 (lower is better)
Translates to: TWPTLREHLACD*PPGHARGPDVS
Trigger: ACTGACGTCAGGCCCACGTGCATGCCCAGGTGGCCAGTCACACGCCAGGTGCTCCCTCAGTGTTGGCCAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR CAA 90 bp CAGCTGCCCAGTGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCGTGTGCTCCTCTCACTaGGCCAACACTGAGGGAGCA +
Preference number: 3 (lower is better)
Translates to: QLPSVQSGPVTAAQGPHPVCSSH*ANTEGA
Trigger: TGCTCCCTCAGTGTTGGCCAAGTGAGAGGAGCACAC...GGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR TCA 72 bp CCCATGTCCTTGAGGCTGACGTGTGCCTGTGTGCACTaGCCCACGCAGATCACCAAGGCGCCAGGGCAGCTT +
Preference number: 3 (lower is better)
Translates to: PMSLRLTCACVH*PTQITKAPGQL
Trigger: AAGCTGCCCTGGCGCCTTGGTGATCTGCGTGGGTCAGTGCACACAGGCACACGTCAGCCTCAAGGACATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR TCA 72 bp CAGAGGAGGCCAACAATGGAGGCAGAGCGTTGCCGTTaGAGGGAACAGCCAGGCCACCCCCTAAGACTGGGG +
Preference number: 3 (lower is better)
Translates to: QRRPTMEAERCR*REQPGHPLRLG
Trigger: CCCCAGTCTTAGGGGGTGGCCTGGCTGTTCCCTTCAACGGCAACGCTCTGCCTCCATTGTTGGCCTCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR TCA 72 bp GGTAGCAACGAACGGTGTCTGCCACGGGGAGGTGTCTaGACGCCCGGAAGGTGTGCTCCTCTCACTTGGCCA +
Preference number: 3 (lower is better)
Translates to: GSNERCLPRGGV*TPGRCAPLTWP
Trigger: TGGCCAAGTGAGAGGAGCACACCTTCCGGGCGTTCAGACACCTCCCCGTGGCAGACACCGTTCGTTGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR GCA 72 bp TCTGCCACGGGGAGGTGTCTGAACGCCCGGAAGGTGTaGTCCTCTCACTTGGCCAACACTGAGGGAGCACCT +
Preference number: 3 (lower is better)
Translates to: SATGRCLNARKV*SSHLANTEGAP
Trigger: AGGTGCTCCCTCAGTGTTGGCCAAGTGAGAGGAGCACACCTTCCGGGCGTTCAGACACCTCCCCGTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR GCA 72 bp GAAGGAGGTGGCTGTTTGGTAGCAACGAACGGTGTCTaGCACGGGGAGGTGTCTGAACGCCCGGAAGGTGTG +
Preference number: 3 (lower is better)
Translates to: EGGGCLVATNGV*HGEVSERPEGV
Trigger: CACACCTTCCGGGCGTTCAGACACCTCCCCGTGGCAGACACCGTTCGTTGCTACCAAACAGCCACCTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR CCA 72 bp GCTCAGACAGTCCCTCCCTGCAGAGGAGGCCAACAATaGAGGCAGAGCGTTGCCGTTGAAGGGAACAGCCAG +
Preference number: 3 (lower is better)
Translates to: AQTVPPCRGGQQ*RQSVAVEGNSQ
Trigger: CTGGCTGTTCCCTTCAACGGCAACGCTCTGCCTCCATTGTTGGCCTCCTCTGCAGGGAGGGACTGTCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR CCA 72 bp ACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACACTaGGTTAGCAGCTGCCCAGTGTCCAATCAGGGCCTG +
Preference number: 3 (lower is better)
Translates to: TLGALQVGSWRH*VSSCPVSNQGL
Trigger: CAGGCCCTGATTGGACACTGGGCAGCTGCTAACCCAGTGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR-3UTR CAA 90 bp GTGCTCAGACAGTCCCTCCCTGCAGAGGAGGCCAACAATGGAGGCAGAGCGTTGGATGTGCCCATGTCCTaGAGGCTGACGTGTGCCTGT +
Preference number: 3 (lower is better)
Translates to: VLRQSLPAEEANNGGRALDVPMS*RLTCAC
Trigger: ACAGGCACACGTCAGCCTCAAGGACATGGGCACATC...CAACGCTCTGCCTCCATTGTTGGCCTCCTCTGCAGGGAGGGACTGTCTGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR CAA 90 bp GACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGAAGATCAAGGGACCTTaGCCCAGCACTGAAAAATGG +
Preference number: 3 (lower is better)
Translates to: DGCARSSPPGLPQSFTTRKIKGP*PSTEKW
Trigger: CCATTTTTCAGTGCTGGGCAAAGGTCCCTTGATCTT...CCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR CAA 90 bp CAGCTGCCCAGTGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCTCTCTCTCAGGCACTTaGCATCTTCTGAGTCTTCTG +
Preference number: 3 (lower is better)
Translates to: QLPSVQSGPVTAAQGPHPSLSGT*HLLSLL
Trigger: CAGAAGACTCAGAAGATGCAAAGTGCCTGAGAGAGA...GGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR CAA 90 bp CCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCAAGATCAAGGGACCTTaGCCCAGCACTGTAGTTCCA +
Preference number: 3 (lower is better)
Translates to: PPGLPQSFTTRTPGHRLLKIKGP*PSTVVP
Trigger: TGGAACTACAGTGCTGGGCAAAGGTCCCTTGATCTT...GAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608497.1
3UTR CCA 72 bp CCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTaGTCACAGGCTACTCCTGAACCAATCACTGGATTG +
Preference number: 3 (lower is better)
Translates to: PRAAPVVHYQDS*SQATPEPITGL
Trigger: CAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR TCA 72 bp CGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCTaGACCAATCACTGGATTGACTGGCTCAGGCTGGTC +
Preference number: 3 (lower is better)
Translates to: RSLPGLLVTGYS*TNHWIDWLRLV
Trigger: GACCAGCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR CCA 72 bp CCAGCACTGAAAAATGGGAGCCCATTAGGAAGGAGGTaGCTGTTTGGTAGCAACGAACGGTGTCTGCCACGG +
Preference number: 3 (lower is better)
Translates to: PALKNGSPLGRR*LFGSNERCLPR
Trigger: CCGTGGCAGACACCGTTCGTTGCTACCAAACAGCCACCTCCTTCCTAATGGGCTCCCATTTTTCAGTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR CCA 72 bp ACTCCTGAACCAATCACTGGATTGACTGGCTCAGGCTaGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAA +
Preference number: 3 (lower is better)
Translates to: TPEPITGLTGSG*SPPSLERKRLQ
Trigger: TTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR-3UTR CAA 90 bp TATCCCGTCTCTCTCAGGCACTTTGCATCTTCTGAGTCTTCTGGCCCTCACACCCCAGGATTGGACGAATaGTCACATCTGCAAGTCTCC +
Preference number: 3 (lower is better)
Translates to: YPVSLRHFASSESSGPHTPGLDE*SHLQVS
Trigger: GGAGACTTGCAGATGTGACAATTCGTCCAATCCTGG...GGTGTGAGGGCCAGAAGACTCAGAAGATGCAAAGTGCCTGAGAGAGACGGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR-3UTR CAA 90 bp TATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACACTGGGTTAGCGAACCAATCACTGGATaGACTGGCTCAGGCTGGTCA +
Preference number: 3 (lower is better)
Translates to: YFLTLGALQVGSWRHWVSEPITG*TGSGWS
Trigger: TGACCAGCCTGAGCCAGTCAATCCAGTGATTGGTTC...GCTAACCCAGTGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
3UTR CCA 72 bp AGGATTGGACGAATTGTCACATCTGCAAGTCTCCACTaGTGTTATTACGTTATCAGGCACAAACCCCCTCCA +
Preference number: 3 (lower is better)
Translates to: RIGRIVTSASLH*CYYVIRHKPPP
Trigger: TGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGACAATTCGTCCAATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR TCA 72 bp GGGTTTGGATTTTCTTCTGAGAAGCCTGCGAAATTTTaGGCAGGAATAGATGCTCAAGCCCAGCCTGATGTT +
Preference number: 3 (lower is better)
Translates to: GFGFSSEKPAKF*AGIDAQAQPDV
Trigger: AACATCAGGCTGGGCTTGAGCATCTATTCCTGCTCAAAATTTCGCAGGCTTCTCAGAAGAAAATCCAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR GCA 72 bp ACAGCATTACCCCAGGATTGGACGAATTGTCACATCTaGAAGTCTCCACTGGTGTTATTACGTTATCAGGCA +
Preference number: 3 (lower is better)
Translates to: TALPQDWTNCHI*KSPLVLLRYQA
Trigger: TGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGACAATTCGTCCAATCCTGGGGTAATGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp GCCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTGGCGCCGCCCTTCCCTaGGACCCCGGACCCAAATAC +
Preference number: 4 (lower is better)
Translates to: ACDGCARSSPPGLPQSFTGAALP*DPGPKY
Trigger: GTATTTGGGTCCGGGGTCTCAGGGAAGGGCGGCGCC...AGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp GACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGGGGCGATCCTGGCGCTaGGCGTCGGCCATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: DGCARSSPPGLPQSFTTRGRSWR*ASAMRS
Trigger: TGACCTCATGGCCGACGCCCAGCGCCAGGATCGCCC...CCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp CCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCTCTGACGGCCGCCTCCTaGAGCTCCAGAGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PRAAPVVHYQDSWSQATPLTAAS*SSRGPG
Trigger: CCCCGGCCCTCTGGAGCTTCAGGAGGCGGCCGTCAG...AGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp GCCCAGTGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGGCACGTAGAAGTCTGTaGACCGCAGCCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: AQCPIRACDGCARSSPPGARRSL*TAALPP
Trigger: CGGCGGGAGGGCTGCGGTTCACAGACTTCTACGTGC...CCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp GCCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTGGGGTGCAGCCAGGATaGCAGCAGATCTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ACDGCARSSPPGLPQSFTGVQPG*QQICRA
Trigger: CGCCCTGCAGATCTGCTGTCATCCTGGCTGCACCCC...AGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp GCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCCACGGGGAGGTGTCTaGACGCCCGGAAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: AAQGPHPQGCPSRSLPGLPRGGV*TPGRCA
Trigger: AGCACACCTTCCGGGCGTTCAGACACCTCCCCGTGG...GAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp GACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGCCTCACCCCCAGGGCTaGCCCAGTCGTTCACTACCA +
Preference number: 4 (lower is better)
Translates to: DGCARSSPPGLPQSFTTRPHPQG*PSRSLP
Trigger: TGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGG...CCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CCA 90 bp CCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTAAAGAAGGGGCGATCCTaGCGCTGGGCGTCGGCCATG +
Preference number: 4 (lower is better)
Translates to: PVTAAQGPHPQGCPSRSLKKGRS*RWASAM
Trigger: CATGGCCGACGCCCAGCGCCAGGATCGCCCCTTCTT...TAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp CCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCGCAGGTCCAGGGAGCTaGCCAGCTCGTGGGTCACGC +
Preference number: 4 (lower is better)
Translates to: PPGLPQSFTTRTPGHRLLAGPGS*PARGSR
Trigger: GCGTGACCCACGAGCTGGCCAGCTCCCTGGACCTGC...GAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp TGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTGACATTGGGCAGTaGGGCCCCAGCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CARSSPPGLPQSFTTRTPGDIGQ*GPSQGC
Trigger: GCAGCCCTGGCTGGGGCCCCACTGCCCAATGTCACC...AGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp GACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGCAAAGCCATCCAAGGTaGCATTGGGCAGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: DGCARSSPPGLPQSFTTRQSHPR*HWAVGP
Trigger: GGGCCCCACTGCCCAATGTCACCTTGGATGGCTTTG...CCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp TGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCAGGCGGAGGTTGCAGTaGGCGGAGATGGTACCACTG +
Preference number: 4 (lower is better)
Translates to: CPIRACDGCARSSPPGLPRRRLQ*AEMVPL
Trigger: CAGTGGTACCATCTCCGCTCACTGCAACCTCCGCCT...GGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR TCA 90 bp CCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCTGGGAGCACCTGGCGTGTaGCTGGCCACCTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: PGLPQSFTTRTPGHRLLLGAPGV*LATWAC
Trigger: GCATGCCCAGGTGGCCAGTCACACGCCAGGTGCTCC...CAGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp GACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGCAGGGTCCCCACAGCTaGATCCAGCTCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: DGCARSSPPGLPQSFTTRQGPHS*IQLHQG
Trigger: TCCCTGATGGAGCTGGATGCAGCTGTGGGGACCCTG...CCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp TGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCCAGGGCCTGCTGCTGTaGCTTCCTAGGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CDGCARSSPPGLPQSFTTQGLLL*LPRSQQ
Trigger: CTGCTGGCTCCTAGGAAGGCACAGCAGCAGGCCCTG...GGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp GACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGGACGTCAGTGTGCCATaGTGCACAGACACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DGCARSSPPGLPQSFTTRDVSVP*CTDTGR
Trigger: CCTGCCCGTGTCTGTGCAGCATGGCACACTGACGTC...CCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp GCCCAGTGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGGGGAGCGATATGACCTaGCCAGAAGGCCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AQCPIRACDGCARSSPPGGSDMT*PEGQGR
Trigger: CCTGCCTTGGCCTTCTGGCCAGGTCATATCGCTCCC...CCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp CAGCTGCCCAGTGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCGAGCAGTCAGAGAGCTaGAGGCGTGGCAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QLPSVQSGPVTAAQGPHPEQSES*RRGRQG
Trigger: ACCCTGCCTGCCACGCCTCCAGCTCTCTGACTGCTC...GGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR TCA 90 bp CAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCTCCAATCAGGGCCTGTaGCGGCTGCGCAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QGPHPQGCPSRSLPGLLVSNQGL*RLRKVL
Trigger: GAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGA...GACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR GCA 90 bp TGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCAACGCCCGGAAGGTGTaGTCCTCTCACTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: CPIRACDGCARSSPPGLPNARKV*SSHLAN
Trigger: GTTGGCCAAGTGAGAGGAGCACACCTTCCGGGCGTT...GGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp CAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCCCTCACCCCCAGGGCTaGCCCAGTCGTTCACTACCA +
Preference number: 4 (lower is better)
Translates to: QGPHPQGCPSRSLPGLLVPHPQG*PSRSLP
Trigger: TGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGG...GACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR GCA 90 bp ACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTAGGGCCTGTGACGGCTaGGCAAGGTCCTCACCCCCA +
Preference number: 4 (lower is better)
Translates to: TPRAAPVVHYQDSWSQATRACDG*ARSSPP
Trigger: TGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCT...AGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CCA 90 bp GACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGGCAGTGGTATCACTGTaGGCAGAGCCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: DGCARSSPPGLPQSFTTRAVVSL*AEPWVK
Trigger: CTTCACCCAGGGCTCTGCCCACAGTGATACCACTGC...CCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CCA 90 bp CAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCAGGCAGGAGAATCCCTaGAACCCGGGAGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: QGPHPQGCPSRSLPGLLVRQENP*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCCAGGGATTCTCCTGCCT...GACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR TCA 90 bp CCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTAGGGCAGAGCCCTGGGTaGAGAAGTGAGCCTTGTACT +
Preference number: 4 (lower is better)
Translates to: PVTAAQGPHPQGCPSRSLGQSPG*RSEPCT
Trigger: AGTACAAGGCTCACTTCTTCACCCAGGGCTCTGCCC...TAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR TCA 90 bp CAGCTGCCCAGTGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCTGGGCCTTGAGCAGCTaGAGCTGTTTCAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: QLPSVQSGPVTAAQGPHPWALSS*SCFRAC
Trigger: GCAAGCCCTGAAACAGCTTCAGCTGCTCAAGGCCCA...GGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp TGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTAGGCGGAGGTTGCAGTaGGCGGAGATGGTACCACTG +
Preference number: 4 (lower is better)
Translates to: CARSSPPGLPQSFTTRTPRRRLQ*AEMVPL
Trigger: CAGTGGTACCATCTCCGCTCACTGCAACCTCCGCCT...AGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR GCA 90 bp CCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCGTGGCAGGCAGGGTCTaGAGTGGTATCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PPGLPQSFTTRTPGHRLLVAGRV*SGITVG
Trigger: GCCCACAGTGATACCACTGCAGACCCTGCCTGCCAC...GAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR GCA 90 bp GCGCCAGGGCAGCTTCCAGAGCCACGACACCAGGGTTCAAATCCCAGCCCAACCTGGGCACAGGTGAAATaGAGAGGCCTGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: APGQLPEPRHQGSNPSPTWAQVK*RGLGGW
Trigger: CCACCCTCCCAGGCCTCTGCATTTCACCTGTGCCCA...GGTTGGGCTGGGATTTGAACCCTGGTGTCGTGGCTCTGGAAGCTGCCCTGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp CAGCTGCCCAGTGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCCGGAGATGGTACCACTaGACTCTAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: QLPSVQSGPVTAAQGPHPRRWYH*TLAWAT
Trigger: TGTCGCCCAGGCTAGAGTGCAGTGGTACCATCTCCG...GGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR GCA 90 bp TGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCCGGAGATGGTACCACTaGACTCTAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: CDGCARSSPPGLPQSFTTRRWYH*TLAWAT
Trigger: TGTCGCCCAGGCTAGAGTGCAGTGGTACCATCTCCG...GGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR GCA 90 bp TGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTACAGACACGGGCAGGTaGTCAGACAGTCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: CARSSPPGLPQSFTTRTPTDTGR*SDSPSL
Trigger: CAGGGAGGGACTGTCTGAGCACCTGCCCGTGTCTGT...AGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp CCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCCCTTAGCCCCACCTaGAGTGTGCAACTCATCACC +
Preference number: 4 (lower is better)
Translates to: PVTAAQGPHPQGCPSRSLPLSPT*SVQLIT
Trigger: GGTGATGAGTTGCACACTCCAGGTGGGGCTAAGGGG...TAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp CCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCTGAGGCAGGAGAATCCCTaGAACCCGGGAGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: PGLPQSFTTRTPGHRLLLRQENP*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCCAGGGATTCTCCTGCCT...CAGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CCA 90 bp GCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCGGTCACCGCCCTCCTTaGAGAGAAAGAGGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: AAQGPHPQGCPSRSLPGLGHRPP*RERGCN
Trigger: GTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACC...GAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CCA 90 bp CCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCTTGACTGGCTCAGGCTaGTCACCGCCCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PPGLPQSFTTRTPGHRLLLTGSG*SPPSLE
Trigger: CTCCAAGGAGGGCGGTGACCAGCCTGAGCCAGTCAA...GAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CCA 90 bp CCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCTTGACTGGCTCAGGCTaGTCACCGCCCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PQGCPSRSLPGLLVTGYSLTGSG*SPPSLE
Trigger: CTCCAAGGAGGGCGGTGACCAGCCTGAGCCAGTCAA...GGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR TCA 90 bp TGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCGCACTTTGCATCTTCTaGGTCTTCTGGCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: CPIRACDGCARSSPPGLPALCIF*VFWPSH
Trigger: GTGTGAGGGCCAGAAGACTCAGAAGATGCAAAGTGC...GGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp CAGCTGCCCAGTGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCCCTAGTGGGCTGAAGTaGTTCTCCCACCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: QLPSVQSGPVTAAQGPHPPSGLK*FSHLNL
Trigger: GAGGTTGAGGTGGGAGAATCACTTCAGCCCACTAGG...GGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGCAGCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp CCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCTGGTGGCAGGCAGGGTCTaGAGTGGTATCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PGLPQSFTTRTPGHRLLLVAGRV*SGITVG
Trigger: GCCCACAGTGATACCACTGCAGACCCTGCCTGCCAC...CAGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR GCA 90 bp CCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCCAGACAGTCCCTCCCTaGAGAGGAGGCCAACAATGG +
Preference number: 4 (lower is better)
Translates to: PQGCPSRSLPGLLVTGYSQTVPP*RGGQQW
Trigger: CCATTGTTGGCCTCCTCTGCAGGGAGGGACTGTCTG...GGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp TGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTAGAGGGAGGGCTACTTaGCTCCAGCAGGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CARSSPPGLPQSFTTRTPRGRAT*LQQALS
Trigger: GGAAAGAGCCTGCTGGAGCCAAGTAGCCCTCCCTCT...AGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp TGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCTCGGGACATACGCATaGTCTCAGGTCCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: CPIRACDGCARSSPPGLPLGTYA*SQVHCL
Trigger: CAGACAATGGACCTGAGACCATGCGTATGTCCCGAG...GGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp GCGCCAGGGCAGCTTCCAGAGCCACGACACCAGGGTTCAAATCCCAGCCCAACCGCACTCAAAGGCACGTaGCGCTGCTCCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: APGQLPEPRHQGSNPSPTALKGT*RCSCEQ
Trigger: CTGTTCACAGGAGCAGCGCCACGTGCCTTTGAGTGC...GGTTGGGCTGGGATTTGAACCCTGGTGTCGTGGCTCTGGAAGCTGCCCTGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR CAA 72 bp GCAGAGGAGGCCAACAATGGAGGCAGAGCGTTGCCGTaGAAGGGAACAGCCAGGCCACCCCCTAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: AEEANNGGRALP*KGTARPPPKTG
Trigger: CCCAGTCTTAGGGGGTGGCCTGGCTGTTCCCTTCAACGGCAACGCTCTGCCTCCATTGTTGGCCTCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR CAA 72 bp CTCCCTGCAGAGGAGGCCAACAATGGAGGCAGAGCGTaGCCGTTGAAGGGAACAGCCAGGCCACCCCCTAAG +
Preference number: 4 (lower is better)
Translates to: LPAEEANNGGRA*PLKGTARPPPK
Trigger: CTTAGGGGGTGGCCTGGCTGTTCCCTTCAACGGCAACGCTCTGCCTCCATTGTTGGCCTCCTCTGCAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp CTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGATCATGCCGGCCATTCCTGTaGGGTAGCCTCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LRLVTALLGEKEAATPRSCRPFL*GSLGQP
Trigger: TGGCTGCCCGAGGCTACCTCACAGGAATGGCCGGCA...TGATCTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp CTGGCTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGAAATGGCCCGCGGCCTaGACGCTCTGCAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LAQAGHRPPWRERGCNSKKWPAA*TLCKAL
Trigger: CAGAGCTTTGCAGAGCGTTCAGGCCGCGGGCCATTT...CTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp CTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGATCAACTCCCGACCTCAGGTaGTCCACCCGCCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: LRLVTALLGEKEAATPRSTPDLR*STRLGF
Trigger: GAAGCCGAGGCGGGTGGATCACCTGAGGTCGGGAGT...TGATCTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCGGCTTGCAGCACCTCTaGGGTGGCCCCGGCCACACC +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLGLQHL*GGPGHT
Trigger: GGTGTGGCCGGGGCCACCCCAGAGGTGCTGCAAGCC...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp TATCCCGTCTCTCTCAGGCACTTTGCATCTTCTGAGTCTTCTGGCCCTCACACCCCCGGGCCACCTGGCTaGGGCCGAAGGTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: YPVSLRHFASSESSGPHTPGPPG*GRRSQL
Trigger: CAGCTGTGACCTTCGGCCCCAGCCAGGTGGCCCGGG...GGTGTGAGGGCCAGAAGACTCAGAAGATGCAAAGTGCCTGAGAGAGACGGGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCCCGGGCCACCTGGCTaGGGCCGAAGGTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPPGPPG*GRRSQL
Trigger: CAGCTGTGACCTTCGGCCCCAGCCAGGTGGCCCGGG...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCAATCACTGGATTGACTaGCTCAGGCTGGTCACCGCC +
Preference number: 4 (lower is better)
Translates to: PPGLPQSFTTRTPGHRLLNHWID*LRLVTA
Trigger: GGCGGTGACCAGCCTGAGCCAGTCAATCCAGTGATT...GAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CCA 90 bp ACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCTCCAGGTAGGCAGCTaGAGACACTGGGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: TPRAAPVVHYQDSWSQATLQVGS*RHWVSS
Trigger: GCTGCTAACCCAGTGTCTCCAGCTGCCTACCTGGAG...AGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR TCA 90 bp GACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCAGGCGCTGGGCGTCGGCCATaGGGTCATGGGCGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: DSWSQATPEPITGLTGSGAGRRP*GHGRKP
Trigger: TGGCTTTCGCCCATGACCTCATGGCCGACGCCCAGC...GCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp GCGCCAGGGCAGCTTCCAGAGCCACGACACCAGGGTTCAAATCCCAGCCCAACCCGTCTAACTGGGCCTTaGGCAGCTGAAGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: APGQLPEPRHQGSNPSPTRLTGP*AAEAVS
Trigger: TGAAACAGCTTCAGCTGCTCAAGGCCCAGTTAGACG...GGTTGGGCTGGGATTTGAACCCTGGTGTCGTGGCTCTGGAAGCTGCCCTGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp CAGGACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCAGAGGAGGGACCGCGGTaGCCCCATGGACATGGGACC +
Preference number: 4 (lower is better)
Translates to: QDSWSQATPEPITGLTGSEEGPR*PHGHGT
Trigger: GGTCCCATGTCCATGGGGGCACCGCGGTCCCTCCTC...TGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp GACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCAGGCGGACGCCAGGGTACATaGCCATCCGAACCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: DSWSQATPEPITGLTGSGGRQGT*PSEPGA
Trigger: GGCTCCCGGTTCGGATGGGCATGTACCCTGGCGTCC...GCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp GACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCAGGCAGGGCCTGTGACGGCTaGGCAAGGTCCTCACCCCCA +
Preference number: 4 (lower is better)
Translates to: DSWSQATPEPITGLTGSGRACDG*ARSSPP
Trigger: TGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCT...GCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCGGGAGACCGCGGGCTaGGACGGAACTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPRETAG*DGTPPG
Trigger: TCCTGGAGGAGTTCCGTCCCAGCCCGCGGTCTCCCG...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCGGGAGACCGCGGGCTaGGACGGAACTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLRETAG*DGTPPG
Trigger: TCCTGGAGGAGTTCCGTCCCAGCCCGCGGTCTCCCG...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCACCGCGGTGCCCCCATaGACATGGGACCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLTAVPP*TWDRGV
Trigger: GACCCCTCGGTCCCATGTCCATGGGGGCACCGCGGT...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCGCAGGTCCAGGGAGCTaGCCAGCTCGTGGGTCACGC +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLAGPGS*PARGSR
Trigger: GCGTGACCCACGAGCTGGCCAGCTCCCTGGACCTGC...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCGCAGGTCCAGGGAGCTaGCCAGCTCGTGGGTCACGC +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPAGPGS*PARGSR
Trigger: GCGTGACCCACGAGCTGGCCAGCTCCCTGGACCTGC...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCGGTGACATTGGGCAGTaGGGCCCCAGCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLGDIGQ*GPSQGC
Trigger: GCAGCCCTGGCTGGGGCCCCACTGCCCAATGTCACC...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CTGGCTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGGCAGTGGTATCACTGTaGGCAGAGCCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LAQAGHRPPWRERGCNSKAVVSL*AEPWVK
Trigger: CTTCACCCAGGGCTCTGCCCACAGTGATACCACTGC...CTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CCA 90 bp TATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACACTGGGTTAGCGGCTTGCAGCACCTCTaGGGTGGCCCCGGCCACACC +
Preference number: 4 (lower is better)
Translates to: YFLTLGALQVGSWRHWVSGLQHL*GGPGHT
Trigger: GGTGTGGCCGGGGCCACCCCAGAGGTGCTGCAAGCC...GCTAACCCAGTGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCGGCTTGCAGCACCTCTaGGGTGGCCCCGGCCACACC +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSGLQHL*GGPGHT
Trigger: GGTGTGGCCGGGGCCACCCCAGAGGTGCTGCAAGCC...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCCCGGGCCACCTGGCTaGGGCCGAAGGTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSPGPPG*GRRSQL
Trigger: CAGCTGTGACCTTCGGCCCCAGCCAGGTGGCCCGGG...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GTGCTCAGACAGTCCCTCCCTGCAGAGGAGGCCAACAATGGAGGCAGAGCGTTGGGTCACCGCCCTCCTTaGAGAGAAAGAGGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: VLRQSLPAEEANNGGRALGHRPP*RERGCN
Trigger: GTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACC...CAACGCTCTGCCTCCATTGTTGGCCTCCTCTGCAGGGAGGGACTGTCTGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp CCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCCACTACCAGGACTCCTaGTCACAGGCTACTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PQGCPSRSLPGLLVTGYSHYQDS*SQATPE
Trigger: TTCAGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTG...GGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR TCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCTGCCGGCCATTCCTGTaGGGTAGCCTCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLCRPFL*GSLGQP
Trigger: TGGCTGCCCGAGGCTACCTCACAGGAATGGCCGGCA...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCGGGGTGCAGCCAGGATaGCAGCAGATCTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPGVQPG*QQICRA
Trigger: CGCCCTGCAGATCTGCTGTCATCCTGGCTGCACCCC...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGGAGGAGGGACCGCGGTaGCCCCATGGACATGGGACC +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEEEGPR*PHGHGT
Trigger: GGTCCCATGTCCATGGGGGCACCGCGGTCCCTCCTC...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
CDS-3UTR GCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCGGCCCCACCCCAAGGTaGCACTTGCCGGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLGPTPR*HLPAIP
Trigger: AGGAATGGCCGGCAAGTGGCACCTTGGGGTGGGGCC...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp TGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTCTCAGGTCCATTGTCTaGAGTGAAGATGACCAGCGT +
Preference number: 4 (lower is better)
Translates to: CARSSPPGLPQSFTTRTPLRSIV*SEDDQR
Trigger: ACGCTGGTCATCTTCACTGCAGACAATGGACCTGAG...AGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp CTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGATCAAGCCGTCTCAGGGCCTaGTGCTGTGCCTTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: LRLVTALLGEKEAATPRSSRLRA*CCAFLG
Trigger: TCCTAGGAAGGCACAGCAGCAGGCCCTGAGACGGCT...TGATCTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCACCGCGGTGCCCCCATaGACATGGGACCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTTAVPP*TWDRGV
Trigger: GACCCCTCGGTCCCATGTCCATGGGGGCACCGCGGT...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCCTCCCGCCGCCAGCTaGTCCAGGTTGGGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPPPAAS*SRLGVV
Trigger: TACCACTCCCAACCTGGACCAGCTGGCGGCGGGAGG...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCACCGTCGCAAGGAGTaGCCGGCGGGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLHRRKE*PAGSRS
Trigger: TGACCTGCTTCCCGCCGGCCACTCCTTGCGACGGTG...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCACCGTCGCAAGGAGTaGCCGGCGGGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPHRRKE*PAGSRS
Trigger: TGACCTGCTTCCCGCCGGCCACTCCTTGCGACGGTG...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGGGGCGATCCTGGCGCTaGGCGTCGGCCATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEGRSWR*ASAMRS
Trigger: TGACCTCATGGCCGACGCCCAGCGCCAGGATCGCCC...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCAAGAAGGGGCGATCCTaGCGCTGGGCGTCGGCCATG +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPKKGRS*RWASAM
Trigger: CATGGCCGACGCCCAGCGCCAGGATCGCCCCTTCTT...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCGAGCTGGCCAGCTCGTaGGTCACGCCGGGAGCGATA +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPELASS*VTPGAI
Trigger: TATCGCTCCCGGCGTGACCCACGAGCTGGCCAGCTC...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCGAGCTGGCCAGCTCGTaGGTCACGCCGGGAGCGATA +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLELASS*VTPGAI
Trigger: TATCGCTCCCGGCGTGACCCACGAGCTGGCCAGCTC...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCGCAGGTCCAGGGAGCTaGCCAGCTCGTGGGTCACGC +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSAGPGS*PARGSR
Trigger: GCGTGACCCACGAGCTGGCCAGCTCCCTGGACCTGC...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCGGTGACATTGGGCAGTaGGGCCCCAGCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTGDIGQ*GPSQGC
Trigger: GCAGCCCTGGCTGGGGCCCCACTGCCCAATGTCACC...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GGATTGACTGGCTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACCCACGGACCTCGTCTaGGTAGGACGGGTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GLTGSGWSPPSLERKRLQPTDLV*VGRVEE
Trigger: TTCTTCTACCCGTCCTACCCAGACGAGGTCCGTGGG...TTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAGCCAGTCAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp GACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCAGGCGAGCAGTCAGAGAGCTaGAGGCGTGGCAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: DSWSQATPEPITGLTGSGEQSES*RRGRQG
Trigger: ACCCTGCCTGCCACGCCTCCAGCTCTCTGACTGCTC...GCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGGGCTTGCAGCACCTCTaGGGTGGCCCCGGCCACACC +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLGLQHL*GGPGHT
Trigger: GGTGTGGCCGGGGCCACCCCAGAGGTGCTGCAAGCC...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCCGGGCCACCTGGCTaGGGCCGAAGGTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LQVSTGVITLSGTNPLQTPGPPG*GRRSQL
Trigger: CAGCTGTGACCTTCGGCCCCAGCCAGGTGGCCCGGG...TGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCCCGGGCCACCTGGCTaGGGCCGAAGGTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLPGPPG*GRRSQL
Trigger: CAGCTGTGACCTTCGGCCCCAGCCAGGTGGCCCGGG...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCTGGGGATCTGGGCAATaGCAGCAAGCTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLWGSGQ*QQAGRG
Trigger: CCCCCGCCCAGCTTGCTGCCATTGCCCAGATCCCCA...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCGCACGTAGAAGTCTGTaGACCGCAGCCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTARRSL*TAALPP
Trigger: CGGCGGGAGGGCTGCGGTTCACAGACTTCTACGTGC...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR TCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGGCACGTAGAAGTCTGTaGACCGCAGCCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEARRSL*TAALPP
Trigger: CGGCGGGAGGGCTGCGGTTCACAGACTTCTACGTGC...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
CDS-3UTR TCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGTGCCGGCCATTCCTGTaGGGTAGCCTCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPECRPFL*GSLGQP
Trigger: TGGCTGCCCGAGGCTACCTCACAGGAATGGCCGGCA...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCCGGCCATTCCTGTaGGGTAGCCTCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTCRPFL*GSLGQP
Trigger: TGGCTGCCCGAGGCTACCTCACAGGAATGGCCGGCA...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGGCTGGGCGTCGGCCATaGGGTCATGGGCGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEAGRRP*GHGRKP
Trigger: TGGCTTTCGCCCATGACCTCATGGCCGACGCCCAGC...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCGCTGGGCGTCGGCCATaGGGTCATGGGCGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTAGRRP*GHGRKP
Trigger: TGGCTTTCGCCCATGACCTCATGGCCGACGCCCAGC...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCGCTGGGCGTCGGCCATaGGGTCATGGGCGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSAGRRP*GHGRKP
Trigger: TGGCTTTCGCCCATGACCTCATGGCCGACGCCCAGC...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCACGCCGGGAGCGATATaGCCTGGCCAGAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPTPGAI*PGQKAK
Trigger: CTTGGCCTTCTGGCCAGGTCATATCGCTCCCGGCGT...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCCAGCAGCAGGGGGCTaGGGTCAAAGCCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPPAAGG*GQSHPR
Trigger: CCTTGGATGGCTTTGACCTCAGCCCCCTGCTGCTGG...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCAGCAGCAGGGGGCTaGGGTCAAAGCCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLPAAGG*GQSHPR
Trigger: CCTTGGATGGCTTTGACCTCAGCCCCCTGCTGCTGG...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCGGGGTGCAGCCAGGATaGCAGCAGATCTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSGVQPG*QQICRA
Trigger: CGCCCTGCAGATCTGCTGTCATCCTGGCTGCACCCC...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp CAGGACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCATCCAATCAGGGCCTGTaGCGGCTGCGCAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QDSWSQATPEPITGLTGSSNQGL*RLRKVL
Trigger: GAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGA...TGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR GCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGGGACGCCAGGGTACATaGCCATCCGAACCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEGRQGT*PSEPGA
Trigger: GGCTCCCGGTTCGGATGGGCATGTACCCTGGCGTCC...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp AGGCAGGGTTTATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACAGGCCCCACCCCAAGGTaGCACTTGCCGGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: RQGLFSYAWSSPGRQLETGPTPR*HLPAIP
Trigger: AGGAATGGCCGGCAAGTGGCACCTTGGGGTGGGGCC...TGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATAAACCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCGGCCCCACCCCAAGGTaGCACTTGCCGGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTGPTPR*HLPAIP
Trigger: AGGAATGGCCGGCAAGTGGCACCTTGGGGTGGGGCC...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGACTGCCGAGGGCTCTTaGCTGTGCCCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPETAEGS*LCPAAG
Trigger: CCCTGCTGCTGGGCACAGGCAAGAGCCCTCGGCAGT...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp CTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGATCAGCCCCACCTGGAGTGTaGAACTCATCACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LRLVTALLGEKEAATPRSAPPGV*NSSPSF
Trigger: GAAGCTGGGTGATGAGTTGCACACTCCAGGTGGGGC...TGATCTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCGTCTCAGGGCCTGCTaGTGTGCCTTCCTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLRLRAC*CAFLGA
Trigger: GGCTCCTAGGAAGGCACAGCAGCAGGCCCTGAGACG...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCGGGAGACCGCGGGCTaGGACGGAACTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLRETAG*DGTPPG
Trigger: TCCTGGAGGAGTTCCGTCCCAGCCCGCGGTCTCCCG...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTACCGCGGTGCCCCCATaGACATGGGACCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPTAVPP*TWDRGV
Trigger: GACCCCTCGGTCCCATGTCCATGGGGGCACCGCGGT...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR CCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCCCTCCCGCCGCCAGCTaGTCCAGGTTGGGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTPPAAS*SRLGVV
Trigger: TACCACTCCCAACCTGGACCAGCTGGCGGCGGGAGG...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCCTCCCGCCGCCAGCTaGTCCAGGTTGGGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSPPAAS*SRLGVV
Trigger: TACCACTCCCAACCTGGACCAGCTGGCGGCGGGAGG...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCAGGGGCCCTGGTCGTaGGAGTACGGGATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLQGPWS*EYGMPR
Trigger: TCTAGGCATCCCGTACTCCCACGACCAGGGCCCCTG...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCAGGGGCCCTGGTCGTaGGAGTACGGGATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPQGPWS*EYGMPR
Trigger: TCTAGGCATCCCGTACTCCCACGACCAGGGCCCCTG...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCTTCTGGCAGGGGCCCTaGTCGTGGGAGTACGGGATG +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPFWQGP*SWEYGM
Trigger: CATCCCGTACTCCCACGACCAGGGCCCCTGCCAGAA...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCAAGCAGGTCAGGTTCTaGCAGGGGCCCTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLKQVRF*QGPWSW
Trigger: CCACGACCAGGGCCCCTGCCAGAACCTGACCTGCTT...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCACCGTCGCAAGGAGTaGCCGGCGGGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEHRRKE*PAGSRS
Trigger: TGACCTGCTTCCCGCCGGCCACTCCTTGCGACGGTG...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCCACCGTCGCAAGGAGTaGCCGGCGGGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTHRRKE*PAGSRS
Trigger: TGACCTGCTTCCCGCCGGCCACTCCTTGCGACGGTG...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCATGGGGACCAGGCCCTaGTCACAGCCACCGTCGCAA +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLMGTRP*SQPPSQ
Trigger: TTGCGACGGTGGCTGTGACCAGGGCCTGGTCCCCAT...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACGGGCGATCCTGGCGCTaGGCGTCGGCCATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHGRSWR*ASAMRS
Trigger: TGACCTCATGGCCGACGCCCAGCGCCAGGATCGCCC...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR CCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGGGGCGATCCTGGCGCTaGGCGTCGGCCATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLGRSWR*ASAMRS
Trigger: TGACCTCATGGCCGACGCCCAGCGCCAGGATCGCCC...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGAAGAAGGGGCGATCCTaGCGCTGGGCGTCGGCCATG +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEKKGRS*RWASAM
Trigger: CATGGCCGACGCCCAGCGCCAGGATCGCCCCTTCTT...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCGAGCTGGCCAGCTCGTaGGTCACGCCGGGAGCGATA +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSELASS*VTPGAI
Trigger: TATCGCTCCCGGCGTGACCCACGAGCTGGCCAGCTC...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGGCAGGTCCAGGGAGCTaGCCAGCTCGTGGGTCACGC +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLAGPGS*PARGSR
Trigger: GCGTGACCCACGAGCTGGCCAGCTCCCTGGACCTGC...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGGTGACATTGGGCAGTaGGGCCCCAGCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPGDIGQ*GPSQGC
Trigger: GCAGCCCTGGCTGGGGCCCCACTGCCCAATGTCACC...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCGAGCAGTCAGAGAGCTaGAGGCGTGGCAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPEQSES*RRGRQG
Trigger: ACCCTGCCTGCCACGCCTCCAGCTCTCTGACTGCTC...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCGAGCAGTCAGAGAGCTaGAGGCGTGGCAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLEQSES*RRGRQG
Trigger: ACCCTGCCTGCCACGCCTCCAGCTCTCTGACTGCTC...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CAGGGTTTATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACACTGTGGGGATCTGGGCAATaGCAGCAAGCTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: QGLFSYAWSSPGRQLETLWGSGQ*QQAGRG
Trigger: CCCCCGCCCAGCTTGCTGCCATTGCCCAGATCCCCA...CAGTGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATAAACCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp GCAGCTGCCCAGTGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCAAAATTAGCTGGGCATaGCAGCACACACCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: AAAQCPIRACDGCARSSPKISWA*QHTPVV
Trigger: AACTACAGGTGTGTGCTGCCATGCCCAGCTAATTTT...GGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp CCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCTGCCCAGCACTGAAAAATaGGAGCCCATTAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PGLPQSFTTRTPGHRLLLPSTEK*EPIRKE
Trigger: CTCCTTCCTAATGGGCTCCCATTTTTCAGTGCTGGG...CAGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR CAA 72 bp TCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATaGACTGGCTCAGGCTGGTCACCGCCCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SWSQATPEPITG*TGSGWSPPSLE
Trigger: CTCCAAGGAGGGCGGTGACCAGCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR TCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCTCTCGAGCGGAGATCTaGTCCTCCTCGCCTAGCGGT +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLSRAEI*SSSPSG
Trigger: ACCGCTAGGCGAGGAGGATCAGATCTCCGCTCGAGA...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACGCACGTAGAAGTCTGTaGACCGCAGCCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHARRSL*TAALPP
Trigger: CGGCGGGAGGGCTGCGGTTCACAGACTTCTACGTGC...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR TCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACTGCCGGCCATTCCTGTaGGGTAGCCTCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHCRPFL*GSLGQP
Trigger: TGGCTGCCCGAGGCTACCTCACAGGAATGGCCGGCA...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR TCA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCTGGGCGTCGGCCATaGGGTCATGGGCGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPAGRRP*GHGRKP
Trigger: TGGCTTTCGCCCATGACCTCATGGCCGACGCCCAGC...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCAAATGGCCCGCGGCCTaGACGCTCTGCAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPKWPAA*TLCKAL
Trigger: CAGAGCTTTGCAGAGCGTTCAGGCCGCGGGCCATTT...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp TCAACAGGCAGGGTTTATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGACGCCGGGAGCGATATaGCCTGGCCAGAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: STGRVYFLTLGALQVGSWTPGAI*PGQKAK
Trigger: CTTGGCCTTCTGGCCAGGTCATATCGCTCCCGGCGT...CCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATAAACCCTGCCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCACGCCGGGAGCGATATaGCCTGGCCAGAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTTPGAI*PGQKAK
Trigger: CTTGGCCTTCTGGCCAGGTCATATCGCTCCCGGCGT...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGACGCCGGGAGCGATATaGCCTGGCCAGAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPETPGAI*PGQKAK
Trigger: CTTGGCCTTCTGGCCAGGTCATATCGCTCCCGGCGT...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCCAGCAGCAGGGGGCTaGGGTCAAAGCCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSPAAGG*GQSHPR
Trigger: CCTTGGATGGCTTTGACCTCAGCCCCCTGCTGCTGG...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp CCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTAGCCTGGCCAACATGGTaGAATCTTGTCTCTATTAAA +
Preference number: 4 (lower is better)
Translates to: PVTAAQGPHPQGCPSRSLAWPTW*NLVSIK
Trigger: TTTAATAGAGACAAGATTTCACCATGTTGGCCAGGC...TAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp CAGGGTTTATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACACTGGCAGAGCGTTGCCGTTaGAGGGAACAGCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: QGLFSYAWSSPGRQLETLAERCR*REQPGH
Trigger: GTGGCCTGGCTGTTCCCTTCAACGGCAACGCTCTGC...CAGTGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATAAACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp CTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACAGGACGCCAGGGTACATaGCCATCCGAACCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LQVSTGVITLSGTNPLQTGRQGT*PSEPGA
Trigger: GGCTCCCGGTTCGGATGGGCATGTACCCTGGCGTCC...TGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR GCA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGGCCCCACCCCAAGGTaGCACTTGCCGGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPGPTPR*HLPAIP
Trigger: AGGAATGGCCGGCAAGTGGCACCTTGGGGTGGGGCC...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACACTGCCGAGGGCTCTTaGCTGTGCCCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHTAEGS*LCPAAG
Trigger: CCCTGCTGCTGGGCACAGGCAAGAGCCCTCGGCAGT...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR GCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGACTGCCGAGGGCTCTTaGCTGTGCCCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLTAEGS*LCPAAG
Trigger: CCCTGCTGCTGGGCACAGGCAAGAGCCCTCGGCAGT...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCGTGGCAGGCAGGGTCTaGAGTGGTATCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPVAGRV*SGITVG
Trigger: GCCCACAGTGATACCACTGCAGACCCTGCCTGCCAC...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp TGTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCCGGGAGACCGCGGGCTaGGACGGAACTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CHICKSPLVLLRYQAQTPRETAG*DGTPPG
Trigger: TCCTGGAGGAGTTCCGTCCCAGCCCGCGGTCTCCCG...GGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGACA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp TGTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCACCGCGGTGCCCCCATaGACATGGGACCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CHICKSPLVLLRYQAQTPTAVPP*TWDRGV
Trigger: GACCCCTCGGTCCCATGTCCATGGGGGCACCGCGGT...GGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCAGATCAGCACGATGTTaGGCGGACGGGCAACGGCCA +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPRSARC*ADGQRP
Trigger: TGGCCGTTGCCCGTCCGCCCAACATCGTGCTGATCT...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCTTCTGGCAGGGGCCCTaGTCGTGGGAGTACGGGATG +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSFWQGP*SWEYGM
Trigger: CATCCCGTACTCCCACGACCAGGGCCCCTGCCAGAA...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCAAGCAGGTCAGGTTCTaGCAGGGGCCCTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSKQVRF*QGPWSW
Trigger: CCACGACCAGGGCCCCTGCCAGAACCTGACCTGCTT...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CAGGGTTTATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACACTGATGGGGACCAGGCCCTaGTCACAGCCACCGTCGCAA +
Preference number: 4 (lower is better)
Translates to: QGLFSYAWSSPGRQLETLMGTRP*SQPPSQ
Trigger: TTGCGACGGTGGCTGTGACCAGGGCCTGGTCCCCAT...CAGTGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATAAACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGATGGGGACCAGGCCCTaGTCACAGCCACCGTCGCAA +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEMGTRP*SQPPSQ
Trigger: TTGCGACGGTGGCTGTGACCAGGGCCTGGTCCCCAT...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCATGGGGACCAGGCCCTaGTCACAGCCACCGTCGCAA +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSMGTRP*SQPPSQ
Trigger: TTGCGACGGTGGCTGTGACCAGGGCCTGGTCCCCAT...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCCTCCACGGACAGGTTaGCCAACAGTGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPPPRTG*PTVGWG
Trigger: TCCCCATCCCACTGTTGGCCAACCTGTCCGTGGAGG...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCTCCACGGACAGGTTaGCCAACAGTGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLPPRTG*PTVGWG
Trigger: TCCCCATCCCACTGTTGGCCAACCTGTCCGTGGAGG...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCGGGAGCGATATGACCTaGCCAGAAGGCCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLGSDMT*PEGQGR
Trigger: CCTGCCTTGGCCTTCTGGCCAGGTCATATCGCTCCC...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCGGGAGCGATATGACCTaGCCAGAAGGCCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPGSDMT*PEGQGR
Trigger: CCTGCCTTGGCCTTCTGGCCAGGTCATATCGCTCCC...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGGAGCTGGCCAGCTCGTaGGTCACGCCGGGAGCGATA +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLELASS*VTPGAI
Trigger: TATCGCTCCCGGCGTGACCCACGAGCTGGCCAGCTC...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGGAGCAGTCAGAGAGCTaGAGGCGTGGCAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEEQSES*RRGRQG
Trigger: ACCCTGCCTGCCACGCCTCCAGCTCTCTGACTGCTC...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCGAGCAGTCAGAGAGCTaGAGGCGTGGCAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSEQSES*RRGRQG
Trigger: ACCCTGCCTGCCACGCCTCCAGCTCTCTGACTGCTC...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACATGGGGATCTGGGCAATaGCAGCAAGCTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LQVSTGVITLSGTNPLQTWGSGQ*QQAGRG
Trigger: CCCCCGCCCAGCTTGCTGCCATTGCCCAGATCCCCA...TGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACTGGGGATCTGGGCAATaGCAGCAAGCTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHWGSGQ*QQAGRG
Trigger: CCCCCGCCCAGCTTGCTGCCATTGCCCAGATCCCCA...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR CCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACGTGCCCCCATGGACATaGGACCGAGGGGTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHVPPWT*DRGVGR
Trigger: TCTCCCGACCCCTCGGTCCCATGTCCATGGGGGCAC...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356098.9
CDS-3UTR CCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACGTGCCCCCATGGACATaGGACCGAGGGGTCCTGACG +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHVPPWT*DRGVLT
Trigger: CGTCAGGACCCCTCGGTCCCATGTCCATGGGGGCAC...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395621.7
CDS-3UTR TCA 90 bp AACAGGCAGGGTTTATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGTCTCGAGCGGAGATCTaGTCCTCCTCGCCTAGCGGT +
Preference number: 4 (lower is better)
Translates to: NRQGLFSYAWSSPGRQLESRAEI*SSSPSG
Trigger: ACCGCTAGGCGAGGAGGATCAGATCTCCGCTCGAGA...CTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATAAACCCTGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGTCTCGAGCGGAGATCTaGTCCTCCTCGCCTAGCGGT +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPESRAEI*SSSPSG
Trigger: ACCGCTAGGCGAGGAGGATCAGATCTCCGCTCGAGA...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTCTCGAGCGGAGATCTaGTCCTCCTCGCCTAGCGGT +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTSRAEI*SSSPSG
Trigger: ACCGCTAGGCGAGGAGGATCAGATCTCCGCTCGAGA...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCAAATGGCCCGCGGCCTaGACGCTCTGCAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTKWPAA*TLCKAL
Trigger: CAGAGCTTTGCAGAGCGTTCAGGCCGCGGGCCATTT...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCCAAAGCCATCCAAGGTaGCATTGGGCAGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTQSHPR*HWAVGP
Trigger: GGGCCCCACTGCCCAATGTCACCTTGGATGGCTTTG...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCAAAGCCATCCAAGGTaGCATTGGGCAGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEQSHPR*HWAVGP
Trigger: GGGCCCCACTGCCCAATGTCACCTTGGATGGCTTTG...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCCAGCAGCAGGGGGCTaGGGTCAAAGCCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHPAAGG*GQSHPR
Trigger: CCTTGGATGGCTTTGACCTCAGCCCCCTGCTGCTGG...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR TCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCGGGCAGAGCCCTGGGTaGAGAAGTGAGCCTTGTACT +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLGQSPG*RSEPCT
Trigger: AGTACAAGGCTCACTTCTTCACCCAGGGCTCTGCCC...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCTGGGCCTTGAGCAGCTaGAGCTGTTTCAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLWALSS*SCFRAC
Trigger: GCAAGCCCTGAAACAGCTTCAGCTGCTCAAGGCCCA...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCTGTGCCTGTGTGCACTaGCCCACGCAGATCACCAAG +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLCACVH*PTQITK
Trigger: CTTGGTGATCTGCGTGGGTCAGTGCACACAGGCACA...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCATGCACGTGGGCCTaGCGTCAGTGTGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPACTWA*RQCAML
Trigger: CAGCATGGCACACTGACGTCAGGCCCACGTGCATGC...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGTCACTTGGCCAACACTaGGGGAGCACCTGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPESLGQH*GSTWRV
Trigger: CACACGCCAGGTGCTCCCTCAGTGTTGGCCAAGTGA...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp GTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTGGCCCCACCCCAAGGTaGCACTTGCCGGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: VTSASLHWCYYVIRHKPPGPTPR*HLPAIP
Trigger: AGGAATGGCCGGCAAGTGGCACCTTGGGGTGGGGCC...AGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR GCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCAGGGTCCCCACAGCTaGATCCAGCTCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSQGPHS*IQLHQG
Trigger: TCCCTGATGGAGCTGGATGCAGCTGTGGGGACCCTG...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCAGGGTCCCCACAGCTaGATCCAGCTCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEQGPHS*IQLHQG
Trigger: TCCCTGATGGAGCTGGATGCAGCTGTGGGGACCCTG...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp GTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTACTGCCGAGGGCTCTTaGCTGTGCCCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VTSASLHWCYYVIRHKPPTAEGS*LCPAAG
Trigger: CCCTGCTGCTGGGCACAGGCAAGAGCCCTCGGCAGT...AGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR GCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGGTGGCAGGCAGGGTCTaGAGTGGTATCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEVAGRV*SGITVG
Trigger: GCCCACAGTGATACCACTGCAGACCCTGCCTGCCAC...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGAGATCAGCACGATGTTaGGCGGACGGGCAACGGCCA +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPERSARC*ADGQRP
Trigger: TGGCCGTTGCCCGTCCGCCCAACATCGTGCTGATCT...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCAGATCAGCACGATGTTaGGCGGACGGGCAACGGCCA +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSRSARC*ADGQRP
Trigger: TGGCCGTTGCCCGTCCGCCCAACATCGTGCTGATCT...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
CDS-3UTR CCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCAGGGGCCCTGGTCGTaGGAGTACGGGATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLQGPWS*EYGMPR
Trigger: TCTAGGCATCCCGTACTCCCACGACCAGGGCCCCTG...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTCAGGGGCCCTGGTCGTaGGAGTACGGGATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPQGPWS*EYGMPR
Trigger: TCTAGGCATCCCGTACTCCCACGACCAGGGCCCCTG...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTTTCTGGCAGGGGCCCTaGTCGTGGGAGTACGGGATG +
Preference number: 4 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPFWQGP*SWEYGM
Trigger: CATCCCGTACTCCCACGACCAGGGCCCCTGCCAGAA...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGTTCTGGCAGGGGCCCTaGTCGTGGGAGTACGGGATG +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLFWQGP*SWEYGM
Trigger: CATCCCGTACTCCCACGACCAGGGCCCCTGCCAGAA...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACAAAGCAGGTCAGGTTCTaGCAGGGGCCCTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: LQVSTGVITLSGTNPLQTKQVRF*QGPWSW
Trigger: CCACGACCAGGGCCCCTGCCAGAACCTGACCTGCTT...TGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp TCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCACCGTCGCAAGGAGTaGCCGGCGGGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SHLQVSTGVITLSGTNPLHRRKE*PAGSRS
Trigger: TGACCTGCTTCCCGCCGGCCACTCCTTGCGACGGTG...GAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp TCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCAAGAAGGGGCGATCCTaGCGCTGGGCGTCGGCCATG +
Preference number: 4 (lower is better)
Translates to: SHLQVSTGVITLSGTNPLKKGRS*RWASAM
Trigger: CATGGCCGACGCCCAGCGCCAGGATCGCCCCTTCTT...GAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCGGGAGCGATATGACCTaGCCAGAAGGCCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSGSDMT*PEGQGR
Trigger: CCTGCCTTGGCCTTCTGGCCAGGTCATATCGCTCCC...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCGGGAGCGATATGACCTaGCCAGAAGGCCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTGSDMT*PEGQGR
Trigger: CCTGCCTTGGCCTTCTGGCCAGGTCATATCGCTCCC...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCACGGACCTCGTCTaGGTAGGACGGGTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLPTDLV*VGRVEE
Trigger: TTCTTCTACCCGTCCTACCCAGACGAGGTCCGTGGG...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCCCACGGACCTCGTCTaGGTAGGACGGGTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPPTDLV*VGRVEE
Trigger: TTCTTCTACCCGTCCTACCCAGACGAGGTCCGTGGG...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCGCAGTGGTATCACTGTaGGCAGAGCCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPAVVSL*AEPWVK
Trigger: CTTCACCCAGGGCTCTGCCCACAGTGATACCACTGC...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCGCAGTGGTATCACTGTaGGCAGAGCCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLAVVSL*AEPWVK
Trigger: CTTCACCCAGGGCTCTGCCCACAGTGATACCACTGC...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCTCAGGCATGGGGATCTaGGCAATGGCAGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLSGMGI*AMAASW
Trigger: CCAGCTTGCTGCCATTGCCCAGATCCCCATGCCTGA...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCTCCCACCCCGTTCCTaGCACTCAAAGGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLLPPRS*HSKARG
Trigger: GCCACGTGCCTTTGAGTGCCAGGAACGGGGTGGGAG...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp AGGCAGGGTTTATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACAGGAAGGGGGTGTGGGTaGAGGCCTCAAGGGCAAACT +
Preference number: 4 (lower is better)
Translates to: RQGLFSYAWSSPGRQLETGRGCG*RPQGQT
Trigger: AGTTTGCCCTTGAGGCCTCCACCCACACCCCCTTCC...TGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATAAACCCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp CAGGACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCACTCCAGGTAGGCAGCTaGAGACACTGGGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: QDSWSQATPEPITGLTGSLQVGS*RHWVSS
Trigger: GCTGCTAACCCAGTGTCTCCAGCTGCCTACCTGGAG...TGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCGTGCCCCCATGGACATaGGACCGAGGGGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSVPPWT*DRGVFR
Trigger: TCTGAAGACCCCTCGGTCCCATGTCCATGGGGGCAC...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395619.3
CDS-3UTR TCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCAAAGCTCTGCCCACTaGACTGAGGGTAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLQSSAH*TEGSGC
Trigger: ACACCCACTACCCTCAGTTCAGTGGGCAGAGCTTTG...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTCAAAGCCATCCAAGGTaGCATTGGGCAGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPQSHPR*HWAVGP
Trigger: GGGCCCCACTGCCCAATGTCACCTTGGATGGCTTTG...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCAAAGCCATCCAAGGTaGCATTGGGCAGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLQSHPR*HWAVGP
Trigger: GGGCCCCACTGCCCAATGTCACCTTGGATGGCTTTG...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp GTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGCAGCAGGGGGCTaGGGTCAAAGCCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: VTSASLHWCYYVIRHKPPPAAGG*GQSHPR
Trigger: CCTTGGATGGCTTTGACCTCAGCCCCCTGCTGCTGG...AGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR TCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGGGGCAGAGCCCTGGGTaGAGAAGTGAGCCTTGTACT +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEGQSPG*RSEPCT
Trigger: AGTACAAGGCTCACTTCTTCACCCAGGGCTCTGCCC...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCTGGGCCTTGAGCAGCTaGAGCTGTTTCAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSWALSS*SCFRAC
Trigger: GCAAGCCCTGAAACAGCTTCAGCTGCTCAAGGCCCA...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTCAGGGTCCCCACAGCTaGATCCAGCTCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPQGPHS*IQLHQG
Trigger: TCCCTGATGGAGCTGGATGCAGCTGTGGGGACCCTG...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGGTGGCAGGCAGGGTCTaGAGTGGTATCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLVAGRV*SGITVG
Trigger: GCCCACAGTGATACCACTGCAGACCCTGCCTGCCAC...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTTGAGGCTGACGTGTaGCTGTGTGCACTGACCCAC +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSLEADV*LCALTH
Trigger: GTGGGTCAGTGCACACAGGCACACGTCAGCCTCAAG...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp CTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACAAGATCAGCACGATGTTaGGCGGACGGGCAACGGCCA +
Preference number: 4 (lower is better)
Translates to: LQVSTGVITLSGTNPLQTRSARC*ADGQRP
Trigger: TGGCCGTTGCCCGTCCGCCCAACATCGTGCTGATCT...TGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCCCACGGACCTCGTCTaGGTAGGACGGGTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSPTDLV*VGRVEE
Trigger: TTCTTCTACCCGTCCTACCCAGACGAGGTCCGTGGG...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGTCAGGCATGGGGATCTaGGCAATGGCAGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPESGMGI*AMAASW
Trigger: CCAGCTTGCTGCCATTGCCCAGATCCCCATGCCTGA...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp TATCCCGTCTCTCTCAGGCACTTTGCATCTTCTGAGTCTTCTGGCCCTCACACCAATCACTGGATTGACTaGCTCAGGCTGGTCACCGCC +
Preference number: 4 (lower is better)
Translates to: YPVSLRHFASSESSGPHTNHWID*LRLVTA
Trigger: GGCGGTGACCAGCCTGAGCCAGTCAATCCAGTGATT...GGTGTGAGGGCCAGAAGACTCAGAAGATGCAAAGTGCCTGAGAGAGACGGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp TCAACAGGCAGGGTTTATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGCTCCGTCAGGGTCCTTaGACAGGTCATAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: STGRVYFLTLGALQVGSWLRQGP*TGHRAA
Trigger: CGCTGCTCTATGACCTGTCCAAGGACCCTGACGGAG...CCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATAAACCCTGCCTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608497.1
CDS-3UTR TCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCCAAAGCTCTGCCCACTaGACTGAGGGTAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTQSSAH*TEGSGC
Trigger: ACACCCACTACCCTCAGTTCAGTGGGCAGAGCTTTG...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCAAAGCTCTGCCCACTaGACTGAGGGTAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSQSSAH*TEGSGC
Trigger: ACACCCACTACCCTCAGTTCAGTGGGCAGAGCTTTG...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp TCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCAAATGGCCCGCGGCCTaGACGCTCTGCAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SHLQVSTGVITLSGTNPLKWPAA*TLCKAL
Trigger: CAGAGCTTTGCAGAGCGTTCAGGCCGCGGGCCATTT...GAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR TCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCTGGGTGAAGAAGTaGGCCTTGTACTTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLPWVKK*ALYFPV
Trigger: GACTGGAAAGTACAAGGCTCACTTCTTCACCCAGGG...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCCCTGGGTGAAGAAGTaGGCCTTGTACTTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPPWVKK*ALYFPV
Trigger: GACTGGAAAGTACAAGGCTCACTTCTTCACCCAGGG...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGGGGCAGAGCCCTGGGTaGAGAAGTGAGCCTTGTACT +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLGQSPG*RSEPCT
Trigger: AGTACAAGGCTCACTTCTTCACCCAGGGCTCTGCCC...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACGGGCAGAGCCCTGGGTaGAGAAGTGAGCCTTGTACT +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHGQSPG*RSEPCT
Trigger: AGTACAAGGCTCACTTCTTCACCCAGGGCTCTGCCC...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR TCA 90 bp TCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCGTGGCGCTGCTCCTGTaGACAGATGTGCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: SHLQVSTGVITLSGTNPLVALLL*TDVPMS
Trigger: GGACATGGGCACATCTGTTCACAGGAGCAGCGCCAC...GAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCGTGGGAGTACGGGATaGCTAGAAATCGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLRGSTG*LEIDGS
Trigger: GCTTCCATCGATTTCTAGGCATCCCGTACTCCCACG...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCGTGGGAGTACGGGATaGCTAGAAATCGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPRGSTG*LEIDGS
Trigger: GCTTCCATCGATTTCTAGGCATCCCGTACTCCCACG...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCTCCACGGACAGGTTaGCCAACAGTGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: VTSASLHWCYYVIRHKPPPPRTG*PTVGWG
Trigger: TCCCCATCCCACTGTTGGCCAACCTGTCCGTGGAGG...AGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCCTCGGGACATACGCATaGTCTCAGGTCCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPLGTYA*SQVHCL
Trigger: CAGACAATGGACCTGAGACCATGCGTATGTCCCGAG...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCAGTGGTATCACTGTaGGCAGAGCCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPAVVSL*AEPWVK
Trigger: CTTCACCCAGGGCTCTGCCCACAGTGATACCACTGC...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGTCTCACCAGGGTCCTTaGACAGGTCATAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPESHQGP*TGHRAA
Trigger: CGCTGCTCTATGACCTGTCCAAGGACCCTGGTGAGA...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACTCAGGCATGGGGATCTaGGCAATGGCAGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHSGMGI*AMAASW
Trigger: CCAGCTTGCTGCCATTGCCCAGATCCCCATGCCTGA...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR CCA 90 bp CTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACATCAGGCATGGGGATCTaGGCAATGGCAGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LQVSTGVITLSGTNPLQTSGMGI*AMAASW
Trigger: CCAGCTTGCTGCCATTGCCCAGATCCCCATGCCTGA...TGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGTCAGGCATGGGGATCTaGGCAATGGCAGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLSGMGI*AMAASW
Trigger: CCAGCTTGCTGCCATTGCCCAGATCCCCATGCCTGA...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCACTACCAGGACTCCTaGTCACAGGCTACTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLHYQDS*SQATPE
Trigger: TTCAGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTG...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp AGGCAGGGTTTATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACACCCTGGGTGAAGAAGTaGGCCTTGTACTTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: RQGLFSYAWSSPGRQLETPWVKK*ALYFPV
Trigger: GACTGGAAAGTACAAGGCTCACTTCTTCACCCAGGG...TGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATAAACCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR TCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCGTCTAACTGGGCCTTaGGCAGCTGAAGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPERLTGP*AAEAVS
Trigger: TGAAACAGCTTCAGCTGCTCAAGGCCCAGTTAGACG...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCCGTCTAACTGGGCCTTaGGCAGCTGAAGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTRLTGP*AAEAVS
Trigger: TGAAACAGCTTCAGCTGCTCAAGGCCCAGTTAGACG...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCGTGGGAGTACGGGATaGCTAGAAATCGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPERGSTG*LEIDGS
Trigger: GCTTCCATCGATTTCTAGGCATCCCGTACTCCCACG...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCGGGACATACGCATaGTCTCAGGTCCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSLGTYA*SQVHCL
Trigger: CAGACAATGGACCTGAGACCATGCGTATGTCCCGAG...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCTCGGGACATACGCATaGTCTCAGGTCCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPELGTYA*SQVHCL
Trigger: CAGACAATGGACCTGAGACCATGCGTATGTCCCGAG...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp GTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTGCAGTGGTATCACTGTaGGCAGAGCCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VTSASLHWCYYVIRHKPPAVVSL*AEPWVK
Trigger: CTTCACCCAGGGCTCTGCCCACAGTGATACCACTGC...AGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTTCTCACCAGGGTCCTTaGACAGGTCATAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPSHQGP*TGHRAA
Trigger: CGCTGCTCTATGACCTGTCCAAGGACCCTGGTGAGA...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGTCTCACCAGGGTCCTTaGACAGGTCATAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLSHQGP*TGHRAA
Trigger: CGCTGCTCTATGACCTGTCCAAGGACCCTGGTGAGA...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp TGTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCCAAAGCTCTGCCCACTaGACTGAGGGTAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: CHICKSPLVLLRYQAQTPQSSAH*TEGSGC
Trigger: ACACCCACTACCCTCAGTTCAGTGGGCAGAGCTTTG...GGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR TCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCCCTGGGTGAAGAAGTaGGCCTTGTACTTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLPWVKK*ALYFPV
Trigger: GACTGGAAAGTACAAGGCTCACTTCTTCACCCAGGG...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR TCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCGTCTAACTGGGCCTTaGGCAGCTGAAGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHRLTGP*AAEAVS
Trigger: TGAAACAGCTTCAGCTGCTCAAGGCCCAGTTAGACG...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR TCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGGTCACAGGCTACTCCTaGACCAATCACTGGATTGAC +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEVTGYS*TNHWID
Trigger: GTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGAC...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp TATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACACTGGGTTAGCGTCACAGGCTACTCCTaGACCAATCACTGGATTGAC +
Preference number: 4 (lower is better)
Translates to: YFLTLGALQVGSWRHWVSVTGYS*TNHWID
Trigger: GTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGAC...GCTAACCCAGTGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR GCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCGTGGGAGTACGGGATaGCTAGAAATCGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHRGSTG*LEIDGS
Trigger: GCTTCCATCGATTTCTAGGCATCCCGTACTCCCACG...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR GCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCGTGGGAGTACGGGATaGCTAGAAATCGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLRGSTG*LEIDGS
Trigger: GCTTCCATCGATTTCTAGGCATCCCGTACTCCCACG...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCAGGTCCATTGTCTaGAGTGAAGATGACCAGCGT +
Preference number: 4 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSLRSIV*SEDDQR
Trigger: ACGCTGGTCATCTTCACTGCAGACAATGGACCTGAG...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCTCAGGTCCATTGTCTaGAGTGAAGATGACCAGCGT +
Preference number: 4 (lower is better)
Translates to: VSTGVITLSGTNPLQTPELRSIV*SEDDQR
Trigger: ACGCTGGTCATCTTCACTGCAGACAATGGACCTGAG...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR GCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCTCGGCTTCCTAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLLGFLK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTAGGAAGCCGAG...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCAGATCAAGGGACCTTTaGCCAGCACTGAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPRSRDL*PALKNG
Trigger: CCCATTTTTCAGTGCTGGGCAAAGGTCCCTTGATCT...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp TCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCTCTCACCAGGGTCCTTaGACAGGTCATAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SHLQVSTGVITLSGTNPLSHQGP*TGHRAA
Trigger: CGCTGCTCTATGACCTGTCCAAGGACCCTGGTGAGA...GAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp TATCCCGTCTCTCTCAGGCACTTTGCATCTTCTGAGTCTTCTGGCCCTCACACCCAACCTCTTTCTGGCTaGGTGATCTTGTACAAGTCC +
Preference number: 4 (lower is better)
Translates to: YPVSLRHFASSESSGPHTQPLSG*VILYKS
Trigger: GGACTTGTACAAGATCACCCAGCCAGAAAGAGGTTG...GGTGTGAGGGCCAGAAGACTCAGAAGATGCAAAGTGCCTGAGAGAGACGGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp AGGCAGGGTTTATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACAAGACTCCCAAGTAGCTaGGATTACAGGGATGCACCA +
Preference number: 4 (lower is better)
Translates to: RQGLFSYAWSSPGRQLETRLPSS*DYRDAP
Trigger: TGGTGCATCCCTGTAATCCCAGCTACTTGGGAGTCT...TGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATAAACCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCCTCAAGGGCAAACTaGGTCACTGTAAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPASRAN*VTVRGL
Trigger: CAAACCCCTTACAGTGACCCAGTTTGCCCTTGAGGC...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp TCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCGTCTAACTGGGCCTTaGGCAGCTGAAGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SHLQVSTGVITLSGTNPLRLTGP*AAEAVS
Trigger: TGAAACAGCTTCAGCTGCTCAAGGCCCAGTTAGACG...GAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR GCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACTCCCCGAGGCTGGAGTaGAGTGGTACAATTATAGCT +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHSPRLE*SGTIIA
Trigger: AGCTATAATTGTACCACTGCACTCCAGCCTCGGGGA...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
3UTR CAA 72 bp GCACCAGCACACAGCATTACCCCAGGATTGGACGAATaGTCACATCTGCAAGTCTCCACTGGTGTTATTACG +
Preference number: 4 (lower is better)
Translates to: APAHSITPGLDE*SHLQVSTGVIT
Trigger: CGTAATAACACCAGTGGAGACTTGCAGATGTGACAATTCGTCCAATCCTGGGGTAATGCTGTGTGCTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR GCA 90 bp TCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCTCAGGTCCATTGTCTaGAGTGAAGATGACCAGCGT +
Preference number: 4 (lower is better)
Translates to: SHLQVSTGVITLSGTNPLLRSIV*SEDDQR
Trigger: ACGCTGGTCATCTTCACTGCAGACAATGGACCTGAG...GAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACAGCCCAACCTCTTTCTaGCTGGGTGATCTTGTACAA +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHSPTSF*LGDLVQ
Trigger: TTGTACAAGATCACCCAGCCAGAAAGAGGTTGGGCT...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp CAGGACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCATGCTCAAGCCCAGCCTaGTGTTTTATTTGTTTATTT +
Preference number: 4 (lower is better)
Translates to: QDSWSQATPEPITGLTGSCSSPA*CFICLF
Trigger: AAATAAACAAATAAAACATCAGGCTGGGCTTGAGCA...TGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR TCA 90 bp CTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACAAAGCCTGCGAAATTTTaGGCAGGAATAGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: LQVSTGVITLSGTNPLQTKPAKF*AGIDAQ
Trigger: TTGAGCATCTATTCCTGCTCAAAATTTCGCAGGCTT...TGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CCA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGTCTGCAAGTCTCCACTaGTGTTATTACGTTATCAGG +
Preference number: 4 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLSASLH*CYYVIR
Trigger: CCTGATAACGTAATAACACCAGTGGAGACTTGCAGA...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CCA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACTCTGCAAGTCTCCACTaGTGTTATTACGTTATCAGG +
Preference number: 4 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHSASLH*CYYVIR
Trigger: CCTGATAACGTAATAACACCAGTGGAGACTTGCAGA...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS CCA 90 bp GGGCTGGCAGGTGGGGCTGCGGGAGCATCAAGGGCTGGGGGACTTTaGGAGGTGGGAGGGTGGCTGAGGGCCCGGGTGGTTCCTACCTGG +
Preference number: 5 (lower is better)
Translates to: GLAGGAAGASRAGGL*EVGGWLRARVVPTW
Trigger: CCAGGTAGGAACCACCCGGGCCCTCAGCCACCCTCCCACCTCCCAAAGTCCCCCAGCCCTTGATGCTCCCGCAGCCCCACCTGCCAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551731.1
CDS CCA 90 bp CCAGGCCAGCAGCCAGGGCCAGGAGGAGGGACCGCGGTGCCCCCATaGACATGGGACCGAGGGGTCTGTCCCAAGAGAGGGAGGGCTACT +
Preference number: 5 (lower is better)
Translates to: PGQQPGPGGGTAVPP*TWDRGVCPKRGRAT
Trigger: AGTAGCCCTCCCTCTCTTGGGACAGACCCCTCGGTCCCATGTCCATGGGGGCACCGCGGTCCCTCCTCCTGGCCCTGGCTGCTGGCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000551731.1
CDS TCA 90 bp CAGCAGGCTCTTTCCGATACCGCAGACCCAGGCGCCGCCCTTCCCTaGGACCCCGGACCCAAATACTCCCCGACCCTGACGGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: QQALSDTADPGAALP*DPGPKYSPTLTAAS
Trigger: GGAGGCGGCCGTCAGGGTCGGGGAGTATTTGGGTCCGGGGTCTCAGGGAAGGGCGGCGCCTGGGTCTGCGGTATCGGAAAGAGCCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000551731.1
CDS CCA 90 bp AAGCTCCAGAGGGCCGGGGCCCGACAGTACCGGGAGACCGCGGGCTaGGACGGAACTCCTCCAGGACCAGGGCACCTTCAGATTCTCGAG +
Preference number: 5 (lower is better)
Translates to: KLQRAGARQYRETAG*DGTPPGPGHLQILE
Trigger: CTCGAGAATCTGAAGGTGCCCTGGTCCTGGAGGAGTTCCGTCCCAGCCCGCGGTCTCCCGGTACTGTCGGGCCCCGGCCCTCTGGAGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000395621.7
ENST00000551731.1
CDS-3UTR CAA 90 bp TGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCCAGGGCTGCCCAAGATCAGCACGATGTaGGGCGGACGGGCAACGGCC +
Preference number: 5 (lower is better)
Translates to: CPIRACDGCARSSPPGLPKISTM*GGRATA
Trigger: GGCCGTTGCCCGTCCGCCCAACATCGTGCTGATCTT...GGGCAGCCCTGGGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CAA 90 bp GCAGCTGCCCAGTGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCGCCAGCTGGTCCAGGTaGGGAGTGGTAGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AAAQCPIRACDGCARSSPASWSR*GVVELG
Trigger: CCCCAGCTCTACCACTCCCAACCTGGACCAGCTGGC...GGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGCAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS CCA 90 bp TGGACATGGGACCGAGGGGTCTGTCCCAAGAGAGGGAGGGCTACTTaGCTCCAGCAGGCTCTTTCCGATACCGCAGACCCAGGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: WTWDRGVCPKRGRAT*LQQALSDTADPGAA
Trigger: GGCGGCGCCTGGGTCTGCGGTATCGGAAAGAGCCTGCTGGAGCCAAGTAGCCCTCCCTCTCTTGGGACAGACCCCTCGGTCCCATGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000551731.1
CDS-3UTR CAA 90 bp TGCGCAAGGTCCTCACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGGGGCGTAAGTCACTaGGCGCTGACCAGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: CARSSPPGLPQSFTTRTPGGVSH*ALTSGV
Trigger: GACTCCGCTGGTCAGCGCCAAGTGACTTACGCCCCC...AGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGTGAGGACCTTGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CAA 90 bp CAGCTGCCCAGTGTCCAATCAGGGCCTGTGACGGCTGCGCAAGGTCCTCACCCCGGCAGAGCGTTGCCGTaGAAGGGAACAGCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: QLPSVQSGPVTAAQGPHPGRALP*KGTARP
Trigger: TGGCCTGGCTGTTCCCTTCAACGGCAACGCTCTGCC...GGGGTGAGGACCTTGCGCAGCCGTCACAGGCCCTGATTGGACACTGGGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS TCA 90 bp CATAGTACAGGAAGAAGGGGCGATCCTGGCGCTGGGCGTCGGCCATaGGGTCATGGGCGAAAGCCATGTAGCGGGCCTCTAGTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: HSTGRRGDPGAGRRP*GHGRKPCSGPLVRA
Trigger: TGCCCGGACTAGAGGCCCGCTACATGGCTTTCGCCCATGACCTCATGGCCGACGCCCAGCGCCAGGATCGCCCCTTCTTCCTGTACTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
ENST00000551731.1
CDS TCA 90 bp CCACCTGGCTGGGGCCGAAGGTCACAGCTGCGTCTAACTGGGCCTTaGGCAGCTGAAGCTGTTTCAGGGCTTGCAGCACCTCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: PPGWGRRSQLRLTGP*AAEAVSGLAAPLGW
Trigger: CCACCCCAGAGGTGCTGCAAGCCCTGAAACAGCTTCAGCTGCTCAAGGCCCAGTTAGACGCAGCTGTGACCTTCGGCCCCAGCCAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS GCA 90 bp GGGCTCATGAGCAGTCAGAGAGCTGGAGGCGTGGCAGGCAGGGTCTaGAGTGGTATCACTGTGGGCAGAGCCCTGGGTGAAGAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: GLMSSQRAGGVAGRV*SGITVGRALGEEVS
Trigger: GCTCACTTCTTCACCCAGGGCTCTGCCCACAGTGATACCACTGCAGACCCTGCCTGCCACGCCTCCAGCTCTCTGACTGCTCATGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
ENST00000608497.1
CDS TCA 90 bp AGCTGCATCCAGCTCCATCAGGGAGTCCCCAAATGGCCCGCGGCCTaGACGCTCTGCAAAGCTCTGCCCACTGAACTGAGGGTAGTGGGT +
Preference number: 5 (lower is better)
Translates to: SCIQLHQGVPKWPAA*TLCKALPTELRVVG
Trigger: ACCCACTACCCTCAGTTCAGTGGGCAGAGCTTTGCAGAGCGTTCAGGCCGCGGGCCATTTGGGGACTCCCTGATGGAGCTGGATGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
ENST00000551731.1
CDS-3UTR CAA 90 bp CCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCTGAATGGAGGCAGAGCGTaGCCGTTGAAGGGAACAGCC +
Preference number: 5 (lower is better)
Translates to: PGLPQSFTTRTPGHRLLLNGGRA*PLKGTA
Trigger: GGCTGTTCCCTTCAACGGCAACGCTCTGCCTCCATT...CAGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CAA 90 bp CCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCTGTGTGCTCCTCTCACTaGGCCAACACTGAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: PRAAPVVHYQDSWSQATPVCSSH*ANTEGA
Trigger: TGCTCCCTCAGTGTTGGCCAAGTGAGAGGAGCACAC...AGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CAA 90 bp ACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTTGGTCACCGCCCTCCTaGGAGAGAAAGAGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: TPRAAPVVHYQDSWSQATWSPPS*ERKRLQ
Trigger: TTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCA...AGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS TCA 90 bp CCCCAAATGGCCCGCGGCCTGAACGCTCTGCAAAGCTCTGCCCACTaGACTGAGGGTAGTGGGTGTGGTGAGAGGCATAGTACAGGAAGA +
Preference number: 5 (lower is better)
Translates to: PQMARGLNALQSSAH*TEGSGCGERHSTGR
Trigger: TCTTCCTGTACTATGCCTCTCACCACACCCACTACCCTCAGTTCAGTGGGCAGAGCTTTGCAGAGCGTTCAGGCCGCGGGCCATTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCGGGGGCGTAAGTCACTaGGCGCTGACCAGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLGGVSH*ALTSGV
Trigger: GACTCCGCTGGTCAGCGCCAAGTGACTTACGCCCCC...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCGGGGGCGTAAGTCACTaGGCGCTGACCAGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPGGVSH*ALTSGV
Trigger: GACTCCGCTGGTCAGCGCCAAGTGACTTACGCCCCC...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCATCCAAGGTGACATaGGGCAGTGGGGCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLPSKVT*GSGAPA
Trigger: GGCTGGGGCCCCACTGCCCAATGTCACCTTGGATGG...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp CAGGGTTTATTTTCTTACGCTTGGAGCTCTCCAGGTAGGCAGCTGGAGACACTGGACTGCCGAGGGCTCTaGCCTGTGCCCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QGLFSYAWSSPGRQLETLDCRGL*PVPSSR
Trigger: CCTGCTGCTGGGCACAGGCAAGAGCCCTCGGCAGTC...CAGTGTCTCCAGCTGCCTACCTGGAGAGCTCCAAGCGTAAGAAAATAAACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CAA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCGACTGCCGAGGGCTCTaGCCTGTGCCCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSDCRGL*PVPSSR
Trigger: CCTGCTGCTGGGCACAGGCAAGAGCCCTCGGCAGTC...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGGACTGCCGAGGGCTCTaGCCTGTGCCCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEDCRGL*PVPSSR
Trigger: CCTGCTGCTGGGCACAGGCAAGAGCCCTCGGCAGTC...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp CCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATaGACTGGCTCAGGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: PRAAPVVHYQDSWSQATPEPITG*TGSGWS
Trigger: TGACCAGCCTGAGCCAGTCAATCCAGTGATTGGTTC...AGGAGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CAA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGGCCAGCTGGTCCAGGTaGGGAGTGGTAGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEASWSR*GVVELG
Trigger: CCCCAGCTCTACCACTCCCAACCTGGACCAGCTGGC...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
CDS-3UTR CAA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCACCCCAAGGTGCCACTaGCCGGCCATTCCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLTPRCH*PAIPVR
Trigger: CCTCACAGGAATGGCCGGCAAGTGGCACCTTGGGGT...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCACCCCAAGGTGCCACTaGCCGGCCATTCCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPTPRCH*PAIPVR
Trigger: CCTCACAGGAATGGCCGGCAAGTGGCACCTTGGGGT...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp GTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCATCCAAGGTGACATaGGGCAGTGGGGCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: VSTGVITLSGTNPLQTPEPSKVT*GSGAPA
Trigger: GGCTGGGGCCCCACTGCCCAATGTCACCTTGGATGG...CTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCCCATCCAAGGTGACATaGGGCAGTGGGGCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTPSKVT*GSGAPA
Trigger: GGCTGGGGCCCCACTGCCCAATGTCACCTTGGATGG...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGACTGCCGAGGGCTCTaGCCTGTGCCCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPDCRGL*PVPSSR
Trigger: CCTGCTGCTGGGCACAGGCAAGAGCCCTCGGCAGTC...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp CTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGATCATGGTCACCGCCCTCCTaGGAGAGAAAGAGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: LRLVTALLGEKEAATPRSWSPPS*ERKRLQ
Trigger: TTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCA...TGATCTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000608497.1
CDS-3UTR CAA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGCCAGCTGGTCCAGGTaGGGAGTGGTAGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPASWSR*GVVELG
Trigger: CCCCAGCTCTACCACTCCCAACCTGGACCAGCTGGC...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
CDS-3UTR CAA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCACCCCAAGGTGCCACTaGCCGGCCATTCCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTTPRCH*PAIPVR
Trigger: CCTCACAGGAATGGCCGGCAAGTGGCACCTTGGGGT...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTCCATCCAAGGTGACATaGGGCAGTGGGGCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPPSKVT*GSGAPA
Trigger: GGCTGGGGCCCCACTGCCCAATGTCACCTTGGATGG...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp GACTCCTGGTCACAGGCTACTCCTGAACCAATCACTGGATTGACTGGCTCAGGCGATGTGCCCATGTCCTaGAGGCTGACGTGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: DSWSQATPEPITGLTGSGDVPMS*RLTCAC
Trigger: ACAGGCACACGTCAGCCTCAAGGACATGGGCACATC...GCCTGAGCCAGTCAATCCAGTGATTGGTTCAGGAGTAGCCTGTGACCAGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CAA 90 bp CTGGCTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGAAGATCAAGGGACCTTaGCCCAGCACTGTAGTTCCA +
Preference number: 5 (lower is better)
Translates to: LAQAGHRPPWRERGCNSKKIKGP*PSTVVP
Trigger: TGGAACTACAGTGCTGGGCAAAGGTCCCTTGATCTT...CTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608497.1
CDS-3UTR CAA 90 bp GTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTGGGGGCGTAAGTCACTaGGCGCTGACCAGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: VTSASLHWCYYVIRHKPPGGVSH*ALTSGV
Trigger: GACTCCGCTGGTCAGCGCCAAGTGACTTACGCCCCC...AGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CAA 90 bp TGTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCGCCAGCTGGTCCAGGTaGGGAGTGGTAGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CHICKSPLVLLRYQAQTPASWSR*GVVELG
Trigger: CCCCAGCTCTACCACTCCCAACCTGGACCAGCTGGC...GGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CAA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTACCCCAAGGTGCCACTaGCCGGCCATTCCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPTPRCH*PAIPVR
Trigger: CCTCACAGGAATGGCCGGCAAGTGGCACCTTGGGGT...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp TCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCCATCCAAGGTGACATaGGGCAGTGGGGCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: SHLQVSTGVITLSGTNPLPSKVT*GSGAPA
Trigger: GGCTGGGGCCCCACTGCCCAATGTCACCTTGGATGG...GAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CAA 90 bp ACCCCCAGGGCTGCCCCAGTCGTTCACTACCAGGACTCCTGGTCACAGGCTACTGTCACTGTAAGGGGTTaGGATTTTCTTCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: TPRAAPVVHYQDSWSQATVTVRG*DFLLRS
Trigger: GCTTCTCAGAAGAAAATCCAAACCCCTTACAGTGAC...AGTAGCCTGTGACCAGGAGTCCTGGTAGTGAACGACTGGGGCAGCCCTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CAA 90 bp CTGGCTCAGGCTGGTCACCGCCCTCCTTGGAGAGAAAGAGGCTGCAACTCCAAGAAGATCAAGGGACCTTaGCCCAGCACTGAAAAATGG +
Preference number: 5 (lower is better)
Translates to: LAQAGHRPPWRERGCNSKKIKGP*PSTEKW
Trigger: CCATTTTTCAGTGCTGGGCAAAGGTCCCTTGATCTT...CTTGGAGTTGCAGCCTCTTTCTCTCCAAGGAGGGCGGTGACCAGCCTGAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CAA 90 bp TCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCACCCCAAGGTGCCACTaGCCGGCCATTCCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: SHLQVSTGVITLSGTNPLTPRCH*PAIPVR
Trigger: CCTCACAGGAATGGCCGGCAAGTGGCACCTTGGGGT...GAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CAA 90 bp CCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCATGGTCTCAGGTCCATaGTCTGCAGTGAAGATGACC +
Preference number: 5 (lower is better)
Translates to: PLVLLRYQAQTPSRHLSLMVSGP*SAVKMT
Trigger: GGTCATCTTCACTGCAGACAATGGACCTGAGACCAT...GAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp ACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCCTCCCATGGTCTCAGGTCCATaGTCTGCAGTGAAGATGACC +
Preference number: 5 (lower is better)
Translates to: TGVITLSGTNPLQTPEPPMVSGP*SAVKMT
Trigger: GGTCATCTTCACTGCAGACAATGGACCTGAGACCAT...GGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp GCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCATGGTCTCAGGTCCATaGTCTGCAGTGAAGATGACC +
Preference number: 5 (lower is better)
Translates to: ASLHWCYYVIRHKPPPDTMVSGP*SAVKMT
Trigger: GGTCATCTTCACTGCAGACAATGGACCTGAGACCAT...GGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
CDS-3UTR CAA 90 bp CAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTCCAGGATTGGACGAATaGTCACATCTGCAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: QVSTGVITLSGTNPLQTPPGLDE*SHLQVS
Trigger: GGAGACTTGCAGATGTGACAATTCGTCCAATCCTGG...AGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CAA 90 bp TGTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCGAACCAATCACTGGATaGACTGGCTCAGGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: CHICKSPLVLLRYQAQTPEPITG*TGSGWS
Trigger: TGACCAGCCTGAGCCAGTCAATCCAGTGATTGGTTC...GGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CAA 90 bp TGTCACATCTGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCATGGTCTCAGGTCCATaGTCTGCAGTGAAGATGACC +
Preference number: 5 (lower is better)
Translates to: CHICKSPLVLLRYQAQTPMVSGP*SAVKMT
Trigger: GGTCATCTTCACTGCAGACAATGGACCTGAGACCAT...GGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCAGATGTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000356098.9
CDS-3UTR CAA 90 bp AAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGTCTCTCTCAGGCACTTaGCATCTTCTGAGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: KSPLVLLRYQAQTPSRHLSLSGT*HLLSLL
Trigger: CAGAAGACTCAGAAGATGCAAAGTGCCTGAGAGAGA...CAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CAA 90 bp TGCAAGTCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCCTCAACCTCCCAAATaGCTAGGACAAATGCTACCA +
Preference number: 5 (lower is better)
Translates to: CKSPLVLLRYQAQTPSRHPQPPK*LGQMLP
Trigger: TGGTAGCATTTGTCCTAGCAATTTGGGAGGTTGAGG...GTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGACTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS-3UTR CAA 90 bp TCTCCACTGGTGTTATTACGTTATCAGGCACAAACCCCCTCCAGACACCTGAGCAGCCTGATGTTTTATTaGTTTATTTGCAGACAGGGT +
Preference number: 5 (lower is better)
Translates to: SPLVLLRYQAQTPSRHLSSLMFY*FICRQG
Trigger: ACCCTGTCTGCAAATAAACAAATAAAACATCAGGCT...GCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAATAACACCAGTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216124.10
CDS CCA 72 bp CAGCCAGGGCCAGGAGGAGGGACCGCGGTGCCCCCATaGACATGGGACCGAGGGGTCGGGAGACCGCGGGCT +
Preference number: 6 (lower is better)
Translates to: QPGPGGGTAVPP*TWDRGVGRPRA
Trigger: AGCCCGCGGTCTCCCGACCCCTCGGTCCCATGTCCATGGGGGCACCGCGGTCCCTCCTCCTGGCCCTGGCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356098.9
CDS CCA 72 bp CAGCCAGGGCCAGGAGGAGGGACCGCGGTGCCCCCATaGACATGGGACCGAGGGGTCCTGACGGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: QPGPGGGTAVPP*TWDRGVLTAAS
Trigger: GGAGGCGGCCGTCAGGACCCCTCGGTCCCATGTCCATGGGGGCACCGCGGTCCCTCCTCCTGGCCCTGGCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395621.7
CDS CCA 72 bp CGGCCGGTCAGGAGGGCGGCCCGGGAGACCGCGGGCTaGGACGGAACTCCTCCAGGACCAGGGCACCTTCAG +
Preference number: 6 (lower is better)
Translates to: RPVRRAARETAG*DGTPPGPGHLQ
Trigger: CTGAAGGTGCCCTGGTCCTGGAGGAGTTCCGTCCCAGCCCGCGGTCTCCCGGGCCGCCCTCCTGACCGGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453344.6
CDS GCA 72 bp CAGGCCAGCAGCCAGGGCCAGGAGGAGGGACCGCGGTaGCCCCATGGACATGGGACCGAGGGGTCGGGAGAC +
Preference number: 6 (lower is better)
Translates to: QASSQGQEEGPR*PHGHGTEGSGD
Trigger: GTCTCCCGACCCCTCGGTCCCATGTCCATGGGGGCACCGCGGTCCCTCCTCCTGGCCCTGGCTGCTGGCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356098.9
CDS TCA 72 bp TGGACATGGGACCGAGGGGTCCTGACGGCCGCCTCCTaGAGCTCCAGAGGGCCGGGGCCCGACAGTACCGGG +
Preference number: 6 (lower is better)
Translates to: WTWDRGVLTAAS*SSRGPGPDSTG
Trigger: CCCGGTACTGTCGGGCCCCGGCCCTCTGGAGCTTCAGGAGGCGGCCGTCAGGACCCCTCGGTCCCATGTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395621.7
CDS GCA 72 bp CAGGCCAGCAGCCAGGGCCAGGAGGAGGGACCGCGGTaGCCCCATGGACATGGGACCGAGGGGTCTGTCCCA +
Preference number: 6 (lower is better)
Translates to: QASSQGQEEGPR*PHGHGTEGSVP
Trigger: TGGGACAGACCCCTCGGTCCCATGTCCATGGGGGCACCGCGGTCCCTCCTCCTGGCCCTGGCTGCTGGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000551731.1
CDS CCA 72 bp CAGCCAGGGCCAGGAGGAGGGACCGCGGTGCCCCCATaGACATGGGACCGAGGGGTCTGTCCCAAGAGAGGG +
Preference number: 6 (lower is better)
Translates to: QPGPGGGTAVPP*TWDRGVCPKRG
Trigger: CCCTCTCTTGGGACAGACCCCTCGGTCCCATGTCCATGGGGGCACCGCGGTCCCTCCTCCTGGCCCTGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000551731.1
CDS CCA 72 bp GGACCAGGCCCTGGTCACAGCCACCGTCGCAAGGAGTaGCCGGCGGGAAGCAGGTCAGGTTCTGGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: GPGPGHSHRRKE*PAGSRSGSGRG
Trigger: GCCCCTGCCAGAACCTGACCTGCTTCCCGCCGGCCACTCCTTGCGACGGTGGCTGTGACCAGGGCCTGGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
ENST00000551731.1
CDS TCA 72 bp GCCCCACCCCAAGGTGCCACTTGCCGGCCATTCCTGTaGGGTAGCCTCGGGCAGCCAGGACTTCGGCCACGG +
Preference number: 6 (lower is better)
Translates to: APPQGATCRPFL*GSLGQPGLRPR
Trigger: CCGTGGCCGAAGTCCTGGCTGCCCGAGGCTACCTCACAGGAATGGCCGGCAAGTGGCACCTTGGGGTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
ENST00000551731.1
CDS GCA 72 bp CAGGCCAGCAGCCAGGGCCAGGAGGAGGGACCGCGGTaGCCCCATGGACATGGGACCGAGGGGTCTTCAGAT +
Preference number: 6 (lower is better)
Translates to: QASSQGQEEGPR*PHGHGTEGSSD
Trigger: ATCTGAAGACCCCTCGGTCCCATGTCCATGGGGGCACCGCGGTCCCTCCTCCTGGCCCTGGCTGCTGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395619.3
CDS CCA 72 bp GGCCAGCTCGTGGGTCACGCCGGGAGCGATATGACCTaGCCAGAAGGCCAAGGCAGGCTCTCGGACACCGCC +
Preference number: 6 (lower is better)
Translates to: GQLVGHAGSDMT*PEGQGRLSDTA
Trigger: GGCGGTGTCCGAGAGCCTGCCTTGGCCTTCTGGCCAGGTCATATCGCTCCCGGCGTGACCCACGAGCTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS CCA 72 bp ATCACATGCCCAGGCCAGCCGAGGGGCCCTCAGGCATaGGGATCTGGGCAATGGCAGCAAGCTGGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: ITCPGQPRGPQA*GSGQWQQAGRG
Trigger: CCCCCGCCCAGCTTGCTGCCATTGCCCAGATCCCCATGCCTGAGGGCCCCTCGGCTGGCCTGGGCATGTGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS CCA 72 bp ATGGACATGGGACCGAGGGGTCGGGAGACCGCGGGCTaGGACGGAACTCCTCCAGGACCAGGGCACCTTCAG +
Preference number: 6 (lower is better)
Translates to: MDMGPRGRETAG*DGTPPGPGHLQ
Trigger: CTGAAGGTGCCCTGGTCCTGGAGGAGTTCCGTCCCAGCCCGCGGTCTCCCGACCCCTCGGTCCCATGTCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356098.9
CDS CCA 72 bp CAGCCAGGGCCAGGAGGAGGGACCGCGGTGCCCCCATaGACATGGGACCGAGGGGTCTTCAGATTCTCGAGC +
Preference number: 6 (lower is better)
Translates to: QPGPGGGTAVPP*TWDRGVFRFSS
Trigger: GCTCGAGAATCTGAAGACCCCTCGGTCCCATGTCCATGGGGGCACCGCGGTCCCTCCTCCTGGCCCTGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395619.3
CDS CCA 72 bp CATAGCCGAGGTCGTCGGCAAAGATCAGCACGATGTTaGGCGGACGGGCAACGGCCAGGCCAGCAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: HSRGRRQRSARC*ADGQRPGQQPG
Trigger: CCCTGGCTGCTGGCCTGGCCGTTGCCCGTCCGCCCAACATCGTGCTGATCTTTGCCGACGACCTCGGCTATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000551731.1
CDS TCA 72 bp GGAAGAAGGGGCGATCCTGGCGCTGGGCGTCGGCCATaGGGTCATGGGCGAAAGCCATGTAGCGGGCCTCTA +
Preference number: 6 (lower is better)
Translates to: GRRGDPGAGRRP*GHGRKPCSGPL
Trigger: TAGAGGCCCGCTACATGGCTTTCGCCCATGACCTCATGGCCGACGCCCAGCGCCAGGATCGCCCCTTCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
ENST00000551731.1
CDS TCA 72 bp GGGACCGAGGGGTCTTCAGATTCTCGAGCGGAGATCTaGTCCTCCTCGCCTAGCGGTCCGGGCTCAGGGTCG +
Preference number: 6 (lower is better)
Translates to: GTEGSSDSRAEI*SSSPSGPGSGS
Trigger: CGACCCTGAGCCCGGACCGCTAGGCGAGGAGGATCAGATCTCCGCTCGAGAATCTGAAGACCCCTCGGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395619.3
CDS CAA 90 bp ATGGACATGGGACCGAGGGGTCTGTCCCAAGAGAGGGAGGGCTACTaGGCTCCAGCAGGCTCTTTCCGATACCGCAGACCCAGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: MDMGPRGLSQEREGY*APAGSFRYRRPRRR
Trigger: GCGGCGCCTGGGTCTGCGGTATCGGAAAGAGCCTGCTGGAGCCAAGTAGCCCTCCCTCTCTTGGGACAGACCCCTCGGTCCCATGTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000551731.1
CDS TCA 72 bp AGGACCAGGGCACCTTCAGATTCTCGAGCGGAGATCTaGTCCTCCTCGCCTAGCGGTCCGGGCTCAGGGTCG +
Preference number: 6 (lower is better)
Translates to: RTRAPSDSRAEI*SSSPSGPGSGS
Trigger: CGACCCTGAGCCCGGACCGCTAGGCGAGGAGGATCAGATCTCCGCTCGAGAATCTGAAGGTGCCCTGGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395621.7
ENST00000453344.6
ENST00000551731.1
CDS TCA 72 bp AGGGTGTGCACAGAGACACAGGCACGTAGAAGTCTGTaGACCGCAGCCCTCCCGCCGCCAGCTGGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: RVCTETQARRSL*TAALPPPAGPG
Trigger: ACCTGGACCAGCTGGCGGCGGGAGGGCTGCGGTTCACAGACTTCTACGTGCCTGTGTCTCTGTGCACACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000551731.1
CDS TCA 72 bp GCCCGCGGCCTGAACGCTCTGCAAAGCTCTGCCCACTaGACTGAGGGTAGTGGGTGTGCTGGGGGCAAAGAC +
Preference number: 6 (lower is better)
Translates to: ARGLNALQSSAH*TEGSGCAGGKD
Trigger: GTCTTTGCCCCCAGCACACCCACTACCCTCAGTTCAGTGGGCAGAGCTTTGCAGAGCGTTCAGGCCGCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551731.1
CDS CCA 72 bp GGGTGGCTGAGGGCCCGGGTGGTTCCTACCTGGTCGTaGGAGTACGGGATGCCTAGAAATCGATGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: GWLRARVVPTWS*EYGMPRNRWKP
Trigger: GGGCTTCCATCGATTTCTAGGCATCCCGTACTCCCACGACCAGGTAGGAACCACCCGGGCCCTCAGCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551731.1
CDS CCA 72 bp GTGGGAGGGTGGCTGAGGGCCCGGGTGGTTCCTACCTaGTCGTGGGAGTACGGGATGCCTAGAAATCGATGG +
Preference number: 6 (lower is better)
Translates to: VGGWLRARVVPT*SWEYGMPRNRW
Trigger: CCATCGATTTCTAGGCATCCCGTACTCCCACGACCAGGTAGGAACCACCCGGGCCCTCAGCCACCCTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551731.1
CDS CAA 72 bp GGACCGAGGGGTCTGTCCCAAGAGAGGGAGGGCTACTaGGCTCCAGCAGGCTCTTTCCGATACCGCAGACCC +
Preference number: 6 (lower is better)
Translates to: GPRGLSQEREGY*APAGSFRYRRP
Trigger: GGGTCTGCGGTATCGGAAAGAGCCTGCTGGAGCCAAGTAGCCCTCCCTCTCTTGGGACAGACCCCTCGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000551731.1
CDS CCA 72 bp GACCGAGGGGTCTGTCCCAAGAGAGGGAGGGCTACTTaGCTCCAGCAGGCTCTTTCCGATACCGCAGACCCA +
Preference number: 6 (lower is better)
Translates to: DRGVCPKRGRAT*LQQALSDTADP
Trigger: TGGGTCTGCGGTATCGGAAAGAGCCTGCTGGAGCCAAGTAGCCCTCCCTCTCTTGGGACAGACCCCTCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216124.10
ENST00000551731.1
CDS TCA 72 bp GCCCGCGGCCTGAACGCTCTGCAAAGCTCTGCCCACTaGACTGAGGGTAGTGGGTGTGGTGAGAGGCATAGT +
Preference number: 6 (lower is better)
Translates to: ARGLNALQSSAH*TEGSGCGERHS
Trigger: ACTATGCCTCTCACCACACCCACTACCCTCAGTTCAGTGGGCAGAGCTTTGCAGAGCGTTCAGGCCGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS CCA 72 bp TCCAGTCCGCACAGCAAAAACCCCACGGACCTCGTCTaGGTAGGACGGGTAGAAGAAGAGAGACTGCCGAGG +
Preference number: 6 (lower is better)
Translates to: SSPHSKNPTDLV*VGRVEEERLPR
Trigger: CCTCGGCAGTCTCTCTTCTTCTACCCGTCCTACCCAGACGAGGTCCGTGGGGTTTTTGCTGTGCGGACTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS TCA 72 bp AAGGTCACAGCTGCGTCTAACTGGGCCTTGAGCAGCTaGAGCTGTTTCAGGGCTTGCAGCACCTCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: KVTAASNWALSS*SCFRACSTSGV
Trigger: CACCCCAGAGGTGCTGCAAGCCCTGAAACAGCTTCAGCTGCTCAAGGCCCAGTTAGACGCAGCTGTGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216124.10
ENST00000356098.9
ENST00000395619.3
ENST00000395621.7
ENST00000453344.6
CDS CCA 72 bp TTAGCACTGGGTAGGGGTCACGGGCAGCCAGGGGGTTaGGCCAAGATCACTTACGTGAGAGGCATAGTACAG +
Preference number: 6 (lower is better)
Translates to: LALGRGHGQPGG*AKITYVRGIVQ
Trigger: CTGTACTATGCCTCTCACGTAAGTGATCTTGGCCCAACCCCCTGGCTGCCCGTGACCCCTACCCAGTGCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551731.1