RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARRDC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000205784

Ensembl transcript IDs: ENST00000381781.2, ENST00000650722.2

Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTaGGTCCTGGGAGACCTTCCCGGTTTCCTTTGTCCATTCCAGGCA +
Preference number: 1 (lower is better)
Translates to: RLGQTQGGKGRLCRV*VLGDLPGFLCPFQA
Trigger: TGCCTGGAATGGACAAAGGAAACCGGGAAGGTCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR CCA 90 bp GGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGTCCTaGGAGACCTTCCCGGTTTCCTTTGTCCATTCCAGGCATTCAGTG +
Preference number: 1 (lower is better)
Translates to: GRLRVEKAGYAGFGS*ETFPVSFVHSRHSV
Trigger: CACTGAATGCCTGGAATGGACAAAGGAAACCGGGAAGGTCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR CCA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCGGGTTTGGGTCCTaGGAGACCTTCCCGGTTTCC +
Preference number: 2 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTAGFGS*ETFPVS
Trigger: GGAAACCGGGAAGGTCTCCCAGGACCCAAACCCGGC...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR TCA 90 bp GGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGTCCTGGGAGAACTCCTCGACTCCTCTaGGAGTCACCTGTGCAAGAG +
Preference number: 2 (lower is better)
Translates to: GADSGWKRQVMPGLGPGRTPRLL*ESPVQE
Trigger: CTCTTGCACAGGTGACTCTCAGAGGAGTCGAGGAGT...TCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR CCA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCGCTGAACAGCGTCCCTaGCCTCCACCCTCTCCACGC +
Preference number: 2 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVAEQRP*PPPSPR
Trigger: GCGTGGAGAGGGTGGAGGCCAGGGACGCTGTTCAGC...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR GCA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCAGAGCTTGGGGAGGTTaGAGACAACCTGTTGCCCAC +
Preference number: 2 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVRAWGG*RQPVAH
Trigger: GTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCT...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR GCA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCGGAAAAGGCAGGTTATaGCGGGTTTGGGTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVGKGRL*RVWVLG
Trigger: TCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCC...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR CCA 90 bp ATCCCCTGCAGTTGTGACAGCCAATACAACCAGACATTAGCAGAGGGGAGAATTAGGTTATGCCGGGTTTaGGTCCTGGGAGACCTTCCC +
Preference number: 2 (lower is better)
Translates to: IPCSCDSQYNQTLAEGRIRLCRV*VLGDLP
Trigger: GGGAAGGTCTCCCAGGACCCAAACCCGGCATAACCT...AATTCTCCCCTCTGCTAATGTCTGGTTGTATTGGCTGTCACAACTGCAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR TCA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACACTCCTCGACTCCTCTaGGAGTCACCTGTGCAAGAG +
Preference number: 2 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYTPRLL*ESPVQE
Trigger: CTCTTGCACAGGTGACTCTCAGAGGAGTCGAGGAGT...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR GCA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCTCTGAGAGTCACCTGTaGAAGAGAGAGGGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVSESHL*KREGFL
Trigger: GAGGAAGCCCTCTCTCTTGCACAGGTGACTCTCAGA...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR GCA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACAGAGCTTGGGGAGGTTaGAGACAACCTGTTGCCCAC +
Preference number: 2 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYRAWGG*RQPVAH
Trigger: GTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCT...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR GCA 90 bp ATCCCCTGCAGTTGTGACAGCCAATACAACCAGACATTAGCAGAGGGGAGAATTTTGCAGACAACCTGTTaGCCACTCCTCGACTCCTCT +
Preference number: 2 (lower is better)
Translates to: IPCSCDSQYNQTLAEGRILQTTC*PLLDSS
Trigger: AGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAA...AATTCTCCCCTCTGCTAATGTCTGGTTGTATTGGCTGTCACAACTGCAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR GCA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATGGAAAAGGCAGGTTATaGCGGGTTTGGGTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNGKGRL*RVWVLG
Trigger: TCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCC...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR GCA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATTCTGAGAGTCACCTGTaGAAGAGAGAGGGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNSESHL*KREGFL
Trigger: GAGGAAGCCCTCTCTCTTGCACAGGTGACTCTCAGA...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR GCA 72 bp AGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATaGCGGGTTTGGGTCCTGGGAGACCTTCCCGGTTTC +
Preference number: 3 (lower is better)
Translates to: RLGQTQGGKGRL*RVWVLGDLPGF
Trigger: GAAACCGGGAAGGTCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR CAA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGTTGCAGACAACCTGTaGCCCACTCCTCGACTCCTC +
Preference number: 3 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTVADNL*PTPRLL
Trigger: GAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAAC...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR CCA 72 bp AGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGTCCTaGGAGACCTTCCCGGTTTCCTTTGTCCATTCCAGG +
Preference number: 3 (lower is better)
Translates to: RVEKAGYAGFGS*ETFPVSFVHSR
Trigger: CCTGGAATGGACAAAGGAAACCGGGAAGGTCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR CCA 72 bp CAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTaGGTCCTGGGAGACCTTCCCGGTTTCCTTTGTCCA +
Preference number: 3 (lower is better)
Translates to: QTQGGKGRLCRV*VLGDLPGFLCP
Trigger: TGGACAAAGGAAACCGGGAAGGTCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR CAA 90 bp CTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCAATCCTTCCCGGTTTCCTTaGTCCATTCCAGGCATTCAG +
Preference number: 3 (lower is better)
Translates to: LHANKTLLPRSPAVVTANPSRFP*SIPGIQ
Trigger: CTGAATGCCTGGAATGGACAAAGGAAACCGGGAAGG...ATTGGCTGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR CAA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCCAGGTTATGCCGGGTTaGGGTCCTGGGAGACCTTCC +
Preference number: 3 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVQVMPG*GPGRPS
Trigger: GGAAGGTCTCCCAGGACCCAAACCCGGCATAACCTG...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR-3UTR CAA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACGTTGCAGACAACCTGTaGCCCACTCCTCGACTCCTC +
Preference number: 3 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYVADNL*PTPRLL
Trigger: GAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAAC...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp GGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGTCCTGGGAGAGCAGGTGCACGGTGGTaGCCAGCTCGTAGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: GADSGWKRQVMPGLGPGRAGARW*PARSEC
Trigger: ACACTCGCTACGAGCTGGTCACCACCGTGCACCTGC...TCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACACCGAGACCGCCGCTCTaGACTGGGCGTGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTPRPPL*TGREAL
Trigger: GAGGGCTTCACGCCCAGTGCAGAGCGGCGGTCTCGG...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCGCCTCAGAAGCTCGCTaGTGTCCAGCCGAGACCGCC +
Preference number: 4 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVASEAR*CPAETA
Trigger: GGCGGTCTCGGCTGGACAGCAGCGAGCTTCTGAGGC...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGGGGTGTTGGCCTCCTaGCTCAGAAGCTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWGVLAS*LRSSLL
Trigger: CAGCAGCGAGCTTCTGAGGCAGGAGGCCAACACCCC...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCTCAGAAGCTCGCTaGTGTCCAGCCGAGACCGCC +
Preference number: 4 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTASEAR*CPAETA
Trigger: GGCGGTCTCGGCTGGACAGCAGCGAGCTTCTGAGGC...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCCGTCCTGCGTGCTGCTaGTCACGGACAGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVRPACC*SRTAAT
Trigger: CGTTGCTGCTGTCCGTGAGCAGCAGCACGCAGGACG...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp ACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTGGGTCACGGGGGTGTTaGCCTCCTGCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TARAWGGCRQPVAHSSTPGSRGC*PPASEA
Trigger: AGCTTCTGAGGCAGGAGGCCAACACCCCCGTGACCC...AGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCGCCGGGTTTGGGTCCTaGGAGACCTTCCCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVAGFGS*ETFPVS
Trigger: GGAAACCGGGAAGGTCTCCCAGGACCCAAACCCGGC...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp ACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCGTAGCGAGTGTGCATaGTCTCACCGTCCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: TARAWGGCRQPVAHSSTPRSECA*SHRPAC
Trigger: GCACGCAGGACGGTGAGATCATGCACACTCGCTACG...AGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCAGGTGCACGGTGGTaGCCAGCTCGTAGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTAGARW*PARSEC
Trigger: ACACTCGCTACGAGCTGGTCACCACCGTGCACCTGC...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCACTGGTCTTGGCACTGTaGGACCCCAGTAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCALVLAL*DPSRLG
Trigger: CCCCAGCCTACTGGGGTCTCACAGTGCCAAGACCAG...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CAGATACCTAAACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCGAGACCGCCGCTCTaGACTGGGCGTGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QIPKPLELGEVADNLLPTPRPPL*TGREAL
Trigger: GAGGGCTTCACGCCCAGTGCAGAGCGGCGGTCTCGG...AGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGTTTAGGTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACACACCGTCCTGCGTGCTaGTGCTCACGGACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTHRPAC*CSRTAA
Trigger: TGCTGCTGTCCGTGAGCAGCAGCACGCAGGACGGTG...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCTCTCACCGTCCTGCGTaGTGCTGCTCACGGACAGCA +
Preference number: 4 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVSHRPA*CCSRTA
Trigger: TGCTGTCCGTGAGCAGCAGCACGCAGGACGGTGAGA...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp GGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGTCCTGGGAGACCGTCCTCTGACAGCTaGCAGATGGCAGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: GADSGWKRQVMPGLGPGRPSSDS*QMAEST
Trigger: AGTGGACTCTGCCATCTGCCAGCTGTCAGAGGACGG...TCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGCCGTCCTCTGACAGCTaGCAGATGGCAGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWPSSDS*QMAEST
Trigger: AGTGGACTCTGCCATCTGCCAGCTGTCAGAGGACGG...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGAGGTTATGCCGGGTTTaGGTCCTGGGAGACCTTCCC +
Preference number: 4 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWRLCRV*VLGDLP
Trigger: GGGAAGGTCTCCCAGGACCCAAACCCGGCATAACCT...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGATGGCAGAGTCCACTaGGGCGCTGGTGATGATGAT +
Preference number: 4 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWDGRVH*GAGDDD
Trigger: ATCATCATCACCAGCGCCTCAGTGGACTCTGCCATC...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp ACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTTGTCCCCCATGTCCCTaGAATTCCCGGTTCGTTGGC +
Preference number: 4 (lower is better)
Translates to: TARAWGGCRQPVAHSSTPCPPCP*NSRFVG
Trigger: GCCAACGAACCGGGAATTTCAGGGACATGGGGGACA...AGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650722.2
CDS-3UTR GCA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACATCTCACCGTCCTGCGTaGTGCTGCTCACGGACAGCA +
Preference number: 4 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTSHRPA*CCSRTA
Trigger: TGCTGTCCGTGAGCAGCAGCACGCAGGACGGTGAGA...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp GGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGTCCTGGGAGAAGAGCTTGGGGAGGTTaGAGACAACCTGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GADSGWKRQVMPGLGPGRRAWGG*RQPVAH
Trigger: GTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCT...TCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp ACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTGCTCCACCTTCACTATaGGGTCCACCAGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TARAWGGCRQPVAHSSTPAPPSL*GPPGCC
Trigger: ACAGCACCCTGGTGGACCCCATAGTGAAGGTGGAGC...AGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCGCTCCACCTTCACTATaGGGTCCACCAGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVAPPSL*GPPGCC
Trigger: ACAGCACCCTGGTGGACCCCATAGTGAAGGTGGAGC...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCAATGGGTCACGGGGGTGTTaGCCTCCTGCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LHANKTLLPRSPAVVTANGSRGC*PPASEA
Trigger: AGCTTCTGAGGCAGGAGGCCAACACCCCCGTGACCC...ATTGGCTGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGCCTTCTCTCCTGGCGTaGAGGTGTTCCTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWPSLLA*RCSFPS
Trigger: AGATGGAAAGGAACACCTTCACGCCAGGAGAGAAGG...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCAGCTCTGCACTGGGCGTaGAGCCCTCGTACTGTATGT +
Preference number: 4 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCAALHWA*SPRTVC
Trigger: ACATACAGTACGAGGGCTTCACGCCCAGTGCAGAGC...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCAATCAACCTTGGTGGTGTTaGAGCGGGTCACGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LHANKTLLPRSPAVVTANQPWWC*SGSRGC
Trigger: ACACCCCCGTGACCCGCTTCAACACCACCAAGGTTG...ATTGGCTGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp GGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGTCCTGGGAGAGATCCCCTGCAGTTGTaGCAGCCAATACAACCAGAC +
Preference number: 4 (lower is better)
Translates to: GADSGWKRQVMPGLGPGRDPLQL*QPIQPD
Trigger: GTCTGGTTGTATTGGCTGTCACAACTGCAGGGGATC...TCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCAACTCCTGGTCTCAAGTaGTCCTCCAGCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCATPGLK*SSSHGL
Trigger: GAGGCCATGGCTGGAGGATCACTTGAGACCAGGAGT...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCGGAAAAGGCAGGTTATaGCGGGTTTGGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVGKGRL*RVWVLG
Trigger: TCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCC...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp ACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTTCTCCCCCGATCCCCTaGAGTTGTGACAGCCAATAC +
Preference number: 4 (lower is better)
Translates to: TARAWGGCRQPVAHSSTPSPPIP*SCDSQY
Trigger: GTATTGGCTGTCACAACTGCAGGGGATCGGGGGAGA...AGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp ACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTAGGAATGAGCCACCATaGTCAGCCCCCTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: TARAWGGCRQPVAHSSTPRNEPP*SAPLVL
Trigger: CAGTACCAAGGGGGCTGAGCATGGTGGCTCATTCCT...AGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCAGGAATGAGCCACCATaGTCAGCCCCCTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVRNEPP*SAPLVL
Trigger: CAGTACCAAGGGGGCTGAGCATGGTGGCTCATTCCT...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGGGGTCTCACAGTGTTaGCCAGGCTTGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWGVSQC*PGLSQT
Trigger: AGTTTGAGACAAGCCTGGGCAACACTGTGAGACCCC...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGACGACCTTCTCTCCTaGCGTGAAGGTGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWDDLLS*REGVPF
Trigger: GAAAGGAACACCTTCACGCCAGGAGAGAAGGTCGTC...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCAATCTGACAGCTGGCAGATaGCAGAGTCCACTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LHANKTLLPRSPAVVTANLTAGR*QSPLRR
Trigger: GCGCCTCAGTGGACTCTGCCATCTGCCAGCTGTCAG...ATTGGCTGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAAGGTTATGCCGGGTTTaGGTCCTGGGAGACCTTCCC +
Preference number: 4 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTRLCRV*VLGDLP
Trigger: GGGAAGGTCTCCCAGGACCCAAACCCGGCATAACCT...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
3UTR CAA 72 bp GCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTaGGGTCCTGGGAGACCTTCCCGGTTTCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: ADSGWKRQVMPG*GPGRPSRFPLS
Trigger: GGACAAAGGAAACCGGGAAGGTCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp ACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCCTTCTCTCCTGGCGTaGAGGTGTTCCTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: TARAWGGCRQPVAHSSTPPSLLA*RCSFPS
Trigger: AGATGGAAAGGAACACCTTCACGCCAGGAGAGAAGG...AGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCAATGCTCTGCACTGGGCGTaGAGCCCTCGTACTGTATGT +
Preference number: 4 (lower is better)
Translates to: LHANKTLLPRSPAVVTANALHWA*SPRTVC
Trigger: ACATACAGTACGAGGGCTTCACGCCCAGTGCAGAGC...ATTGGCTGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CAGATACCTAAACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCGTAGCGAGTGTGCATaGTCTCACCGTCCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: QIPKPLELGEVADNLLPTRSECA*SHRPAC
Trigger: GCACGCAGGACGGTGAGATCATGCACACTCGCTACG...AGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGTTTAGGTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CAGATACCTAAACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTTGGGAACTTTGGCCTTaGGGCTGGTCAGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: QIPKPLELGEVADNLLPTWELWP*GWSGTR
Trigger: CCTGGTCCCTGACCAGCCTCAAGGCCAAAGTTCCCA...AGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGTTTAGGTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCAACTCCTCGACTCCTCTaGGAGTCACCTGTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCATPRLL*ESPVQE
Trigger: CTCTTGCACAGGTGACTCTCAGAGGAGTCGAGGAGT...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACATCTCCCCCGATCCCCTaGAGTTGTGACAGCCAATAC +
Preference number: 4 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTSPPIP*SCDSQY
Trigger: GTATTGGCTGTCACAACTGCAGGGGATCGGGGGAGA...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCCCTGCCCTTTTATGCTaGAGCCAGCCAGGTAGATTC +
Preference number: 4 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVPALLC*SQPGRF
Trigger: GAATCTACCTGGCTGGCTCCAGCATAAAAGGGCAGG...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCCCCTCGTACTGTATGTaGGCATACAGGGCGAATACG +
Preference number: 4 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVPSYCM*AYRANT
Trigger: CGTATTCGCCCTGTATGCCCACATACAGTACGAGGG...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp ACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCCCTCGTACTGTATGTaGGCATACAGGGCGAATACG +
Preference number: 4 (lower is better)
Translates to: TARAWGGCRQPVAHSSTPPSYCM*AYRANT
Trigger: CGTATTCGCCCTGTATGCCCACATACAGTACGAGGG...AGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CAGATACCTAAACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTGAGACCCCAGTAGGCTaGGGCAGACTCAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: QIPKPLELGEVADNLLPTETPVG*GRLRVE
Trigger: TTCCACCCTGAGTCTGCCCCAGCCTACTGGGGTCTC...AGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGTTTAGGTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCAGTGATCCTCCAGCCATaGCCTCCTAAAGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCAVILQP*PPKVLG
Trigger: TCCCAGGACTTTAGGAGGCCATGGCTGGAGGATCAC...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCCTGGTCTTGGCACTGTaGGACCCCAGTAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVLVLAL*DPSRLG
Trigger: CCCCAGCCTACTGGGGTCTCACAGTGCCAAGACCAG...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGATCCCCTGCAGTTGTaGCAGCCAATACAACCAGAC +
Preference number: 4 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTDPLQL*QPIQPD
Trigger: GTCTGGTTGTATTGGCTGTCACAACTGCAGGGGATC...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCATTTGCAAACAGACAGTaGCCTGGCGGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCAFANRQ*PGGSSC
Trigger: ACAACTGCTGCCGCCAGGGCACTGTCTGTTTGCAAA...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCGGGGTGTTGGCCTCCTaGCTCAGAAGCTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVGVLAS*LRSSLL
Trigger: CAGCAGCGAGCTTCTGAGGCAGGAGGCCAACACCCC...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCCGTCCTGCGTGCTGCTaGTCACGGACAGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVRPACC*SRTAAT
Trigger: CGTTGCTGCTGTCCGTGAGCAGCAGCACGCAGGACG...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCAGGGGTCTCACAGTGTTaGCCAGGCTTGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCAGVSQC*PGLSQT
Trigger: AGTTTGAGACAAGCCTGGGCAACACTGTGAGACCCC...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCCAACCTTGGTGGTGTTaGAGCGGGTCACGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVQPWWC*SGSRGC
Trigger: ACACCCCCGTGACCCGCTTCAACACCACCAAGGTTG...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCTGGGAACTTTGGCCTTaGGGCTGGTCAGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVWELWP*GWSGTR
Trigger: CCTGGTCCCTGACCAGCCTCAAGGCCAAAGTTCCCA...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CAGATACCTAAACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTACTCCTCGACTCCTCTaGGAGTCACCTGTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: QIPKPLELGEVADNLLPTTPRLL*ESPVQE
Trigger: CTCTTGCACAGGTGACTCTCAGAGGAGTCGAGGAGT...AGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGTTTAGGTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCAGCTATAATCACAGGATaGCCCGGCTTCTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCAAIITG*PGFFTP
Trigger: TGGAGTGAAGAAGCCGGGGCATCCTGTGATTATAGC...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp ACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTTTCCATCTGGATTTaGAAACAGACAGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TARAWGGCRQPVAHSSTPLSIWI*KQTVPW
Trigger: CCAGGGCACTGTCTGTTTGCAAATCCAGATGGAAAG...AGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACCACCGTCCTGCGTGCTaGTGCTCACGGACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYHRPAC*CSRTAA
Trigger: TGCTGCTGTCCGTGAGCAGCAGCACGCAGGACGGTG...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCAATTCTGAGAGTCACCTGTaGAAGAGAGAGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LHANKTLLPRSPAVVTANSESHL*KREGFL
Trigger: GAGGAAGCCCTCTCTCTTGCACAGGTGACTCTCAGA...ATTGGCTGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CAGATACCTAAACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTGGAAAAGGCAGGTTATaGCGGGTTTGGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QIPKPLELGEVADNLLPTGKGRL*RVWVLG
Trigger: TCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCC...AGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGTTTAGGTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp GGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGTCCTGGGAGAGGAGGTAAGTTGAAATaGAAGTCAAAGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GADSGWKRQVMPGLGPGRGGKLK*KSKVWL
Trigger: CAGCCACACCTTTGACTTCCATTTCAACTTACCTCC...TCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACGAACAAGGGGTTCTaGAATGGGGTTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVTNKGF*NGVSLW
Trigger: CCACAAAGAAACCCCATTCCAGAACCCCTTGTTCGT...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCCTGACAGCTGGCAGATaGCAGAGTCCACTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVLTAGR*QSPLRR
Trigger: GCGCCTCAGTGGACTCTGCCATCTGCCAGCTGTCAG...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACGCCGGGTTTGGGTCCTaGGAGACCTTCCCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYAGFGS*ETFPVS
Trigger: GGAAACCGGGAAGGTCTCCCAGGACCCAAACCCGGC...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATGCTGAACAGCGTCCCTaGCCTCCACCCTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNAEQRP*PPPSPR
Trigger: GCGTGGAGAGGGTGGAGGCCAGGGACGCTGTTCAGC...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CAGATACCTAAACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTGTGATCCTCCAGCCATaGCCTCCTAAAGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QIPKPLELGEVADNLLPTVILQP*PPKVLG
Trigger: TCCCAGGACTTTAGGAGGCCATGGCTGGAGGATCAC...AGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGTTTAGGTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGAAGGTGGAAGTTCCTTaGACCAATAAGTACATCCTC +
Preference number: 4 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWKVEVP*TNKYIL
Trigger: GAGGATGTACTTATTGGTTCAAGGAACTTCCACCTT...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CAGATACCTAAACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTTGGGGTCCACCAGGGTaGTGTTCAGGGTTAAGATCA +
Preference number: 4 (lower is better)
Translates to: QIPKPLELGEVADNLLPTWGPPG*CSGLRS
Trigger: TGATCTTAACCCTGAACAGCACCCTGGTGGACCCCA...AGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGTTTAGGTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCAATGCTATAATCACAGGATaGCCCGGCTTCTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: LHANKTLLPRSPAVVTANAIITG*PGFFTP
Trigger: TGGAGTGAAGAAGCCGGGGCATCCTGTGATTATAGC...ATTGGCTGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CAGATACCTAAACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTTTGCAGACAACCTGTTaGCCACTCCTCGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: QIPKPLELGEVADNLLPTLQTTC*PLLDSS
Trigger: AGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAA...AGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGTTTAGGTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCATGGAAGTCAAAGGTGTaGCTGCCTGCACTTAACCAA +
Preference number: 4 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCAWKSKV*LPALNQ
Trigger: TTGGTTAAGTGCAGGCAGCCACACCTTTGACTTCCA...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGAGTACATCCTCTTCTTaGCTAAAATGTGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWSTSSS*LKCVPC
Trigger: GCAGGGAACACATTTTAGCCAAGAAGAGGATGTACT...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACACAAGGGGTTCTGGAATaGGGTTTCTTTGTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTQGVLE*GFFVEG
Trigger: ACCTTCCACAAAGAAACCCCATTCCAGAACCCCTTG...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGATGCATTTGCTGGTCTaGTTGTTGATCTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWMHLLV*LLISVV
Trigger: CACAACAGAGATCAACAACCAGACCAGCAAATGCAT...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACGAGACCCCAGTAGGCTaGGGCAGACTCAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYETPVG*GRLRVE
Trigger: TTCCACCCTGAGTCTGCCCCAGCCTACTGGGGTCTC...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATACTCCTGGTCTCAAGTaGTCCTCCAGCCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNTPGLK*SSSHGL
Trigger: GAGGCCATGGCTGGAGGATCACTTGAGACCAGGAGT...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCAAGTCAAAGGTGTGGCTaGCTGCACTTAACCAATTAT +
Preference number: 4 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCASQRCG*LHLTNY
Trigger: ATAATTGGTTAAGTGCAGGCAGCCACACCTTTGACT...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCAATCTAAAATGTGTTCCCTaGCCATGCAGGAAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LHANKTLLPRSPAVVTANLKCVP*PCRKLV
Trigger: TACAAGCTTCCTGCATGGGCAGGGAACACATTTTAG...ATTGGCTGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCTTTGCAAACAGACAGTaGCCTGGCGGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVFANRQ*PGGSSC
Trigger: ACAACTGCTGCCGCCAGGGCACTGTCTGTTTGCAAA...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGTGTTCCTTTCCATCTaGATTTGCAAACAGACAGTG +
Preference number: 4 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTVFLSI*ICKQTV
Trigger: CACTGTCTGTTTGCAAATCCAGATGGAAAGGAACAC...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCACTTATGCACGTAGTCTaGCTTGTTGTTGCAAATAAC +
Preference number: 4 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCALMHVV*LVVANN
Trigger: GTTATTTGCAACAACAAGGCAGACTACGTGCATAAG...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCAATAGTCAAAGGTGTGGCTaGCTGCACTTAACCAATTAT +
Preference number: 4 (lower is better)
Translates to: LHANKTLLPRSPAVVTANSQRCG*LHLTNY
Trigger: ATAATTGGTTAAGTGCAGGCAGCCACACCTTTGACT...ATTGGCTGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACTCTGAGAGTCACCTGTaGAAGAGAGAGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYSESHL*KREGFL
Trigger: GAGGAAGCCCTCTCTCTTGCACAGGTGACTCTCAGA...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACTTGCAGACAACCTGTTaGCCACTCCTCGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYLQTTC*PLLDSS
Trigger: AGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAA...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp ATCCCCTGCAGTTGTGACAGCCAATACAACCAGACATTAGCAGAGGGGAGAATTCCTGCCCTTTTATGCTaGAGCCAGCCAGGTAGATTC +
Preference number: 4 (lower is better)
Translates to: IPCSCDSQYNQTLAEGRIPALLC*SQPGRF
Trigger: GAATCTACCTGGCTGGCTCCAGCATAAAAGGGCAGG...AATTCTCCCCTCTGCTAATGTCTGGTTGTATTGGCTGTCACAACTGCAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCTTTCTTTGTGGAAGGTaGAAGTTCCTTGAACCAATA +
Preference number: 4 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVFLCGR*KFLEPI
Trigger: TATTGGTTCAAGGAACTTCCACCTTCCACAAAGAAA...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CAGATACCTAAACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTAAGGTGGAAGTTCCTTaGACCAATAAGTACATCCTC +
Preference number: 4 (lower is better)
Translates to: QIPKPLELGEVADNLLPTKVEVP*TNKYIL
Trigger: GAGGATGTACTTATTGGTTCAAGGAACTTCCACCTT...AGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGTTTAGGTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR TCA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACCGAATACGACCGTCTTaGTGCATTTGCTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYRIRPS*CICWSG
Trigger: ACCAGACCAGCAAATGCATCAAGACGGTCGTATTCG...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATTGGGGTCCACCAGGGTaGTGTTCAGGGTTAAGATCA +
Preference number: 4 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNWGPPG*CSGLRS
Trigger: TGATCTTAACCCTGAACAGCACCCTGGTGGACCCCA...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCTGTGTTCCCTGCCCATaGAGGAAGCTTGTACGAAAT +
Preference number: 4 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVCVPCP*RKLVRN
Trigger: ATTTCGTACAAGCTTCCTGCATGGGCAGGGAACACA...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCATTTCTTTGTGGAAGGTaGAAGTTCCTTGAACCAATA +
Preference number: 4 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCAFLCGR*KFLEPI
Trigger: TATTGGTTCAAGGAACTTCCACCTTCCACAAAGAAA...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATGACGACCTTCTCTCCTaGCGTGAAGGTGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNDDLLS*REGVPF
Trigger: GAAAGGAACACCTTCACGCCAGGAGAGAAGGTCGTC...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACTGTGTTCCCTGCCCATaGAGGAAGCTTGTACGAAAT +
Preference number: 4 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYCVPCP*RKLVRN
Trigger: ATTTCGTACAAGCTTCCTGCATGGGCAGGGAACACA...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp ATCCCCTGCAGTTGTGACAGCCAATACAACCAGACATTAGCAGAGGGGAGAATTCAAGGGGTTCTGGAATaGGGTTTCTTTGTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: IPCSCDSQYNQTLAEGRIQGVLE*GFFVEG
Trigger: ACCTTCCACAAAGAAACCCCATTCCAGAACCCCTTG...AATTCTCCCCTCTGCTAATGTCTGGTTGTATTGGCTGTCACAACTGCAGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATAGGGTTAAGATCACCTaGCCTTTTATGCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNRVKIT*PFMLEP
Trigger: TGGCTCCAGCATAAAAGGGCAGGTGATCTTAACCCT...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp ATCCCCTGCAGTTGTGACAGCCAATACAACCAGACATTAGCAGAGGGGAGAATTGGAGGTAAGTTGAAATaGAAGTCAAAGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: IPCSCDSQYNQTLAEGRIGGKLK*KSKVWL
Trigger: CAGCCACACCTTTGACTTCCATTTCAACTTACCTCC...AATTCTCCCCTCTGCTAATGTCTGGTTGTATTGGCTGTCACAACTGCAGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATACGAACAAGGGGTTCTaGAATGGGGTTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNTNKGF*NGVSLW
Trigger: CCACAAAGAAACCCCATTCCAGAACCCCTTGTTCGT...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACAGTACATCCTCTTCTTaGCTAAAATGTGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYSTSSS*LKCVPC
Trigger: GCAGGGAACACATTTTAGCCAAGAAGAGGATGTACT...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp ATCCCCTGCAGTTGTGACAGCCAATACAACCAGACATTAGCAGAGGGGAGAATTATGCATTTGCTGGTCTaGTTGTTGATCTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: IPCSCDSQYNQTLAEGRIMHLLV*LLISVV
Trigger: CACAACAGAGATCAACAACCAGACCAGCAAATGCAT...AATTCTCCCCTCTGCTAATGTCTGGTTGTATTGGCTGTCACAACTGCAGGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CCA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATGTGTTCCTTTCCATCTaGATTTGCAAACAGACAGTG +
Preference number: 4 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNVFLSI*ICKQTV
Trigger: CACTGTCTGTTTGCAAATCCAGATGGAAAGGAACAC...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR GCA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATCTTATGCACGTAGTCTaGCTTGTTGTTGCAAATAAC +
Preference number: 4 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNLMHVV*LVVANN
Trigger: GTTATTTGCAACAACAAGGCAGACTACGTGCATAAG...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS GCA 90 bp CTCCTGCCTCAGAAGCTCGCTGCTGTCCAGCCGAGACCGCCGCTCTaGACTGGGCGTGAAGCCCTCGTACTGTATGTGGGCATACAGGGC +
Preference number: 5 (lower is better)
Translates to: LLPQKLAAVQPRPPL*TGREALVLYVGIQG
Trigger: GCCCTGTATGCCCACATACAGTACGAGGGCTTCACGCCCAGTGCAGAGCGGCGGTCTCGGCTGGACAGCAGCGAGCTTCTGAGGCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS GCA 90 bp ACAACCTTGGTGGTGTTGAAGCGGGTCACGGGGGTGTTGGCCTCCTaGCTCAGAAGCTCGCTGCTGTCCAGCCGAGACCGCCGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: TTLVVLKRVTGVLAS*LRSSLLSSRDRRSA
Trigger: TGCAGAGCGGCGGTCTCGGCTGGACAGCAGCGAGCTTCTGAGGCAGGAGGCCAACACCCCCGTGACCCGCTTCAACACCACCAAGGTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS TCA 90 bp GAAGCTCGCTGCTGTCCAGCCGAGACCGCCGCTCTGCACTGGGCGTaGAGCCCTCGTACTGTATGTGGGCATACAGGGCGAATACGACCG +
Preference number: 5 (lower is better)
Translates to: EARCCPAETAALHWA*SPRTVCGHTGRIRP
Trigger: CGGTCGTATTCGCCCTGTATGCCCACATACAGTACGAGGGCTTCACGCCCAGTGCAGAGCGGCGGTCTCGGCTGGACAGCAGCGAGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp ACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCGGGTCACGGGGGTGTaGGCCTCCTGCCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: TARAWGGCRQPVAHSSTPRVTGV*ASCLRS
Trigger: GCTTCTGAGGCAGGAGGCCAACACCCCCGTGACCCG...AGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACACGGGTCACGGGGGTGTaGGCCTCCTGCCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTRVTGV*ASCLRS
Trigger: GCTTCTGAGGCAGGAGGCCAACACCCCCGTGACCCG...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CCA 90 bp CGAGACCGCCGCTCTGCACTGGGCGTGAAGCCCTCGTACTGTATGTaGGCATACAGGGCGAATACGACCGTCTTGATGCATTTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: RDRRSALGVKPSYCM*AYRANTTVLMHLLV
Trigger: GACCAGCAAATGCATCAAGACGGTCGTATTCGCCCTGTATGCCCACATACAGTACGAGGGCTTCACGCCCAGTGCAGAGCGGCGGTCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACACAGGTTATGCCGGGTTaGGGTCCTGGGAGACCTTCC +
Preference number: 5 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTQVMPG*GPGRPS
Trigger: GGAAGGTCTCCCAGGACCCAAACCCGGCATAACCTG...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCAGTTGCAGACAACCTGTaGCCCACTCCTCGACTCCTC +
Preference number: 5 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCAVADNL*PTPRLL
Trigger: GAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAAC...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CACCCTCTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGGGGGTCTCACAGTGTaGCCCAGGCTTGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: HPLHANKTLLPRSPAVVTGGLTV*PRLVSN
Trigger: GTTTGAGACAAGCCTGGGCAACACTGTGAGACCCCC...TGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAGAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CCA 90 bp CACTCCATTCGACGTAACCCCTTCCCACGAGCTCCACCTTCACTATaGGGTCCACCAGGGTGCTGTTCAGGGTTAAGATCACCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: HSIRRNPFPRAPPSL*GPPGCCSGLRSPAL
Trigger: AAGGGCAGGTGATCTTAACCCTGAACAGCACCCTGGTGGACCCCATAGTGAAGGTGGAGCTCGTGGGAAGGGGTTACGTCGAATGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCAAGCAGCAACGGCAGGTaGAAGGTGCTGACAACCTTG +
Preference number: 5 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCASSNGR*KVLTTL
Trigger: CAAGGTTGTCAGCACCTTCAACCTGCCGTTGCTGCT...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp ACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCCTTCCCGGTTTCCTTaGTCCATTCCAGGCATTCAG +
Preference number: 5 (lower is better)
Translates to: TARAWGGCRQPVAHSSTPPSRFP*SIPGIQ
Trigger: CTGAATGCCTGGAATGGACAAAGGAAACCGGGAAGG...AGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp GGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGTCCTGGGAGAAGCCTGGGAGGTAAGTaGAAATGGAAGTCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: GADSGWKRQVMPGLGPGRSLGGK*KWKSKV
Trigger: CACCTTTGACTTCCATTTCAACTTACCTCCCAGGCT...TCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGTTGCTGGTCTGGTTGTaGATCTCTGTTGTGAAGACG +
Preference number: 5 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWLLVWL*ISVVKT
Trigger: CGTCTTCACAACAGAGATCAACAACCAGACCAGCAA...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp GGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGGTCCTGGGAGAACCGTCTTGATGCATTaGCTGGTCTGGTTGTTGATC +
Preference number: 5 (lower is better)
Translates to: GADSGWKRQVMPGLGPGRTVLMH*LVWLLI
Trigger: GATCAACAACCAGACCAGCAAATGCATCAAGACGGT...TCTCCCAGGACCCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCAATAAGGTGCTGACAACCTaGGTGGTGTTGAAGCGGGTC +
Preference number: 5 (lower is better)
Translates to: LHANKTLLPRSPAVVTANKVLTT*VVLKRV
Trigger: GACCCGCTTCAACACCACCAAGGTTGTCAGCACCTT...ATTGGCTGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCAATGATGATGGGAACTTaGGCCTTGAGGCTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCAMMMGT*ALRLVR
Trigger: CCTGACCAGCCTCAAGGCCAAAGTTCCCATCATCAT...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGAAGACATGGCCAAATTaGCTGGTGAAGGTAGAAGGA +
Preference number: 5 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWKTWPN*LVKVEG
Trigger: TCCTTCTACCTTCACCAGCAAATTTGGCCATGTCTT...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCGCCCATGCAGGAAGCTaGTACGAAATAGAAGACATG +
Preference number: 5 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVAHAGS*YEIEDM
Trigger: CATGTCTTCTATTTCGTACAAGCTTCCTGCATGGGC...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp ACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTTGGAATGGGGTTTCTTaGTGGAAGGTGGAAGTTCCT +
Preference number: 5 (lower is better)
Translates to: TARAWGGCRQPVAHSSTPWNGVS*WKVEVP
Trigger: AGGAACTTCCACCTTCCACAAAGAAACCCCATTCCA...AGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CCCAGTAGGCTGGGGCAGACTCAGGGTGGAAAAGGCAGGTTATGCCGGGTTTGGCATTTGCTGGTCTGGTaGTTGATCTCTGTTGTGAAG +
Preference number: 5 (lower is better)
Translates to: PSRLGQTQGGKGRLCRVWHLLVW*LISVVK
Trigger: CTTCACAACAGAGATCAACAACCAGACCAGCAAATG...CCAAACCCGGCATAACCTGCCTTTTCCACCCTGAGTCTGCCCCAGCCTACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCACAACCTTGGTGGTGTaGAAGCGGGTCACGGGGGTG +
Preference number: 5 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVTTLVV*KRVTGV
Trigger: CACCCCCGTGACCCGCTTCAACACCACCAAGGTTGT...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS GCA 90 bp GGTCCACCAGGGTGCTGTTCAGGGTTAAGATCACCTGCCCTTTTATaGTGGAGCCAGCCAGGTAGATTCTATCCTCGGGCAGCACTAATT +
Preference number: 5 (lower is better)
Translates to: GPPGCCSGLRSPALL*WSQPGRFYPRAALI
Trigger: AATTAGTGCTGCCCGAGGATAGAATCTACCTGGCTGGCTCCAGCATAAAAGGGCAGGTGATCTTAACCCTGAACAGCACCCTGGTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CCA 90 bp CCACCAGGGTGCTGTTCAGGGTTAAGATCACCTGCCCTTTTATGCTaGAGCCAGCCAGGTAGATTCTATCCTCGGGCAGCACTAATTCGA +
Preference number: 5 (lower is better)
Translates to: PPGCCSGLRSPALLC*SQPGRFYPRAALIR
Trigger: TCGAATTAGTGCTGCCCGAGGATAGAATCTACCTGGCTGGCTCCAGCATAAAAGGGCAGGTGATCTTAACCCTGAACAGCACCCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCAAGACATGGCCAAATTaGCTGGTGAAGGTAGAAGGA +
Preference number: 5 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVKTWPN*LVKVEG
Trigger: TCCTTCTACCTTCACCAGCAAATTTGGCCATGTCTT...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp GCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCCATTTGCTGGTCTGGTaGTTGATCTCTGTTGTGAAG +
Preference number: 5 (lower is better)
Translates to: AWGGCRQPVAHSSTPLRVHLLVW*LISVVK
Trigger: CTTCACAACAGAGATCAACAACCAGACCAGCAAATG...GACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp GGTTGCAGACAACCTGTTGCCCACTCCTCGACTCCTCTGAGAGTCACCTGTGCAACCGTCTTGATGCATTaGCTGGTCTGGTTGTTGATC +
Preference number: 5 (lower is better)
Translates to: GCRQPVAHSSTPLRVTCATVLMH*LVWLLI
Trigger: GATCAACAACCAGACCAGCAAATGCATCAAGACGGT...TGCACAGGTGACTCTCAGAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CAGATACCTAAACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTGCGAATACGACCGTCTaGATGCATTTGCTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: QIPKPLELGEVADNLLPTANTTV*MHLLVW
Trigger: CCAGACCAGCAAATGCATCAAGACGGTCGTATTCGC...AGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGTTTAGGTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACACAACCTTGGTGGTGTaGAAGCGGGTCACGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYTTLVV*KRVTGV
Trigger: CACCCCCGTGACCCGCTTCAACACCACCAAGGTTGT...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CAGATACCTAAACCGCTAGAGCTTGGGGAGGTTGCAGACAACCTGTTGCCCACTATGATGATGGGAACTTaGGCCTTGAGGCTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: QIPKPLELGEVADNLLPTMMMGT*ALRLVR
Trigger: CCTGACCAGCCTCAAGGCCAAAGTTCCCATCATCAT...AGTGGGCAACAGGTTGTCTGCAACCTCCCCAAGCTCTAGCGGTTTAGGTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCGTTGCAGACAACCTGTaGCCCACTCCTCGACTCCTC +
Preference number: 5 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVVADNL*PTPRLL
Trigger: GAGGAGTCGAGGAGTGGGCAACAGGTTGTCTGCAAC...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CCA 90 bp TGGGCATACAGGGCGAATACGACCGTCTTGATGCATTTGCTGGTCTaGTTGTTGATCTCTGTTGTGAAGACGACCTTCTCTCCTGGCGTG +
Preference number: 5 (lower is better)
Translates to: WAYRANTTVLMHLLV*LLISVVKTTFSPGV
Trigger: CACGCCAGGAGAGAAGGTCGTCTTCACAACAGAGATCAACAACCAGACCAGCAAATGCATCAAGACGGTCGTATTCGCCCTGTATGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CTCCACGCCAATAAGACTCTTCTCCCCCGATCCCCTGCAGTTGTGACAGCCAATTGGAATGGGGTTTCTTaGTGGAAGGTGGAAGTTCCT +
Preference number: 5 (lower is better)
Translates to: LHANKTLLPRSPAVVTANWNGVS*WKVEVP
Trigger: AGGAACTTCCACCTTCCACAAAGAAACCCCATTCCA...ATTGGCTGTCACAACTGCAGGGGATCGGGGGAGAAGAGTCTTATTGGCGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATCAGGTTATGCCGGGTTaGGGTCCTGGGAGACCTTCC +
Preference number: 5 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNQVMPG*GPGRPS
Trigger: GGAAGGTCTCCCAGGACCCAAACCCGGCATAACCTG...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp ATCCCCTGCAGTTGTGACAGCCAATACAACCAGACATTAGCAGAGGGGAGAATTGGGGGTCTCACAGTGTaGCCCAGGCTTGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: IPCSCDSQYNQTLAEGRIGGLTV*PRLVSN
Trigger: GTTTGAGACAAGCCTGGGCAACACTGTGAGACCCCC...AATTCTCCCCTCTGCTAATGTCTGGTTGTATTGGCTGTCACAACTGCAGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CTTTGTCCATTCCAGGCATTCAGTGATAGTTCTAGGGAGGGGAGACACAGATACAAGGTGCTGACAACCTaGGTGGTGTTGAAGCGGGTC +
Preference number: 5 (lower is better)
Translates to: LCPFQAFSDSSREGRHRYKVLTT*VVLKRV
Trigger: GACCCGCTTCAACACCACCAAGGTTGTCAGCACCTT...GTATCTGTGTCTCCCCTCCCTAGAACTATCACTGAATGCCTGGAATGGACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCCCTTTCCATCTGGATTaGCAAACAGACAGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVPFHLD*QTDSAL
Trigger: CAGGGCACTGTCTGTTTGCAAATCCAGATGGAAAGG...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATAGCAGCAACGGCAGGTaGAAGGTGCTGACAACCTTG +
Preference number: 5 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNSSNGR*KVLTTL
Trigger: CAAGGTTGTCAGCACCTTCAACCTGCCGTTGCTGCT...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS GCA 90 bp GTCTGCCTTGTTGTTGCAAATAACATTTCTGCTATAATCACAGGATaGCCCGGCTTCTTCACTCCATTCGACGTAACCCCTTCCCACGAG +
Preference number: 5 (lower is better)
Translates to: VCLVVANNISAIITG*PGFFTPFDVTPSHE
Trigger: CTCGTGGGAAGGGGTTACGTCGAATGGAGTGAAGAAGCCGGGGCATCCTGTGATTATAGCAGAAATGTTATTTGCAACAACAAGGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp CCCCTTGGTACTGTTGACATTCAGGATAAACAATTCCTGATTGTGGGGGCCGTCAGCCTGGGAGGTAAGTaGAAATGGAAGTCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: PLGTVDIQDKQFLIVGAVSLGGK*KWKSKV
Trigger: CACCTTTGACTTCCATTTCAACTTACCTCCCAGGCT...GACGGCCCCCACAATCAGGAATTGTTTATCCTGAATGTCAACAGTACCAAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATGCGAATACGACCGTCTaGATGCATTTGCTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNANTTV*MHLLVW
Trigger: CCAGACCAGCAAATGCATCAAGACGGTCGTATTCGC...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATCCTTTCCATCTGGATTaGCAAACAGACAGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNPFHLD*QTDSAL
Trigger: CAGGGCACTGTCTGTTTGCAAATCCAGATGGAAAGG...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CCA 90 bp GTAGAAGGAAGCCTGGGAGGTAAGTTGAAATGGAAGTCAAAGGTGTaGCTGCCTGCACTTAACCAATTATCCTCCACTGGGAATGTCTTT +
Preference number: 5 (lower is better)
Translates to: VEGSLGGKLKWKSKV*LPALNQLSSTGNVF
Trigger: AAAGACATTCCCAGTGGAGGATAATTGGTTAAGTGCAGGCAGCCACACCTTTGACTTCCATTTCAACTTACCTCCCAGGCTTCCTTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS-3UTR CAA 90 bp AATGAGCCACCATGCTCAGCCCCCTTGGTACTGTTGACATTCAGGATAAACAATTTGCTGGTCTGGTTGTaGATCTCTGTTGTGAAGACG +
Preference number: 5 (lower is better)
Translates to: NEPPCSAPLVLLTFRINNLLVWL*ISVVKT
Trigger: CGTCTTCACAACAGAGATCAACAACCAGACCAGCAA...ATTGTTTATCCTGAATGTCAACAGTACCAAGGGGGCTGAGCATGGTGGCTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CCA 90 bp CCTCCACGAACAAGGGGTTCTGGAATGGGGTTTCTTTGTGGAAGGTaGAAGTTCCTTGAACCAATAAGTACATCCTCTTCTTGGCTAAAA +
Preference number: 5 (lower is better)
Translates to: PPRTRGSGMGFLCGR*KFLEPISTSSSWLK
Trigger: TTTTAGCCAAGAAGAGGATGTACTTATTGGTTCAAGGAACTTCCACCTTCCACAAAGAAACCCCATTCCAGAACCCCTTGTTCGTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CCA 90 bp TGTGGAAGGTGGAAGTTCCTTGAACCAATAAGTACATCCTCTTCTTaGCTAAAATGTGTTCCCTGCCCATGCAGGAAGCTTGTACGAAAT +
Preference number: 5 (lower is better)
Translates to: CGRWKFLEPISTSSS*LKCVPCPCRKLVRN
Trigger: ATTTCGTACAAGCTTCCTGCATGGGCAGGGAACACATTTTAGCCAAGAAGAGGATGTACTTATTGGTTCAAGGAACTTCCACCTTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS GCA 90 bp CTTGAACCAATAAGTACATCCTCTTCTTGGCTAAAATGTGTTCCCTaGCCATGCAGGAAGCTTGTACGAAATAGAAGACATGGCCAAATT +
Preference number: 5 (lower is better)
Translates to: LEPISTSSSWLKCVP*PCRKLVRNRRHGQI
Trigger: AATTTGGCCATGTCTTCTATTTCGTACAAGCTTCCTGCATGGGCAGGGAACACATTTTAGCCAAGAAGAGGATGTACTTATTGGTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS GCA 72 bp GTGGTGTTGAAGCGGGTCACGGGGGTGTTGGCCTCCTaGCTCAGAAGCTCGCTGCTGTCCAGCCGAGACCGC +
Preference number: 6 (lower is better)
Translates to: VVLKRVTGVLAS*LRSSLLSSRDR
Trigger: GCGGTCTCGGCTGGACAGCAGCGAGCTTCTGAGGCAGGAGGCCAACACCCCCGTGACCCGCTTCAACACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS GCA 72 bp CAGAAGCTCGCTGCTGTCCAGCCGAGACCGCCGCTCTaGACTGGGCGTGAAGCCCTCGTACTGTATGTGGGC +
Preference number: 6 (lower is better)
Translates to: QKLAAVQPRPPL*TGREALVLYVG
Trigger: GCCCACATACAGTACGAGGGCTTCACGCCCAGTGCAGAGCGGCGGTCTCGGCTGGACAGCAGCGAGCTTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS TCA 72 bp TGCTGTCCAGCCGAGACCGCCGCTCTGCACTGGGCGTaGAGCCCTCGTACTGTATGTGGGCATACAGGGCGA +
Preference number: 6 (lower is better)
Translates to: CCPAETAALHWA*SPRTVCGHTGR
Trigger: TCGCCCTGTATGCCCACATACAGTACGAGGGCTTCACGCCCAGTGCAGAGCGGCGGTCTCGGCTGGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 90 bp AAGGTGCTGACAACCTTGGTGGTGTTGAAGCGGGTCACGGGGGTGTaGGCCTCCTGCCTCAGAAGCTCGCTGCTGTCCAGCCGAGACCGC +
Preference number: 6 (lower is better)
Translates to: KVLTTLVVLKRVTGV*ASCLRSSLLSSRDR
Trigger: GCGGTCTCGGCTGGACAGCAGCGAGCTTCTGAGGCAGGAGGCCAACACCCCCGTGACCCGCTTCAACACCACCAAGGTTGTCAGCACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 90 bp CTGCTCACGGACAGCAGCAACGGCAGGTTGAAGGTGCTGACAACCTaGGTGGTGTTGAAGCGGGTCACGGGGGTGTTGGCCTCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: LLTDSSNGRLKVLTT*VVLKRVTGVLASCL
Trigger: GAGGCAGGAGGCCAACACCCCCGTGACCCGCTTCAACACCACCAAGGTTGTCAGCACCTTCAACCTGCCGTTGCTGCTGTCCGTGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 90 bp TCACCGTCCTGCGTGCTGCTGCTCACGGACAGCAGCAACGGCAGGTaGAAGGTGCTGACAACCTTGGTGGTGTTGAAGCGGGTCACGGGG +
Preference number: 6 (lower is better)
Translates to: SPSCVLLLTDSSNGR*KVLTTLVVLKRVTG
Trigger: CCCCGTGACCCGCTTCAACACCACCAAGGTTGTCAGCACCTTCAACCTGCCGTTGCTGCTGTCCGTGAGCAGCAGCACGCAGGACGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 90 bp GCAGAGTCCACTGAGGCGCTGGTGATGATGATGGGAACTTTGGCCTaGAGGCTGGTCAGGGACCAGGGCAGGTGCACGGTGGTGACCAGC +
Preference number: 6 (lower is better)
Translates to: AESTEALVMMMGTLA*RLVRDQGRCTVVTS
Trigger: GCTGGTCACCACCGTGCACCTGCCCTGGTCCCTGACCAGCCTCAAGGCCAAAGTTCCCATCATCATCACCAGCGCCTCAGTGGACTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 72 bp ACAACCTTGGTGGTGTTGAAGCGGGTCACGGGGGTGTaGGCCTCCTGCCTCAGAAGCTCGCTGCTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: TTLVVLKRVTGV*ASCLRSSLLSS
Trigger: GCTGGACAGCAGCGAGCTTCTGAGGCAGGAGGCCAACACCCCCGTGACCCGCTTCAACACCACCAAGGTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 90 bp GACAGCAGCAACGGCAGGTTGAAGGTGCTGACAACCTTGGTGGTGTaGAAGCGGGTCACGGGGGTGTTGGCCTCCTGCCTCAGAAGCTCG +
Preference number: 6 (lower is better)
Translates to: DSSNGRLKVLTTLVV*KRVTGVLASCLRSS
Trigger: CGAGCTTCTGAGGCAGGAGGCCAACACCCCCGTGACCCGCTTCAACACCACCAAGGTTGTCAGCACCTTCAACCTGCCGTTGCTGCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 90 bp CAGATGGCAGAGTCCACTGAGGCGCTGGTGATGATGATGGGAACTTaGGCCTTGAGGCTGGTCAGGGACCAGGGCAGGTGCACGGTGGTG +
Preference number: 6 (lower is better)
Translates to: QMAESTEALVMMMGT*ALRLVRDQGRCTVV
Trigger: CACCACCGTGCACCTGCCCTGGTCCCTGACCAGCCTCAAGGCCAAAGTTCCCATCATCATCACCAGCGCCTCAGTGGACTCTGCCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 72 bp TGCGTGCTGCTGCTCACGGACAGCAGCAACGGCAGGTaGAAGGTGCTGACAACCTTGGTGGTGTTGAAGCGG +
Preference number: 6 (lower is better)
Translates to: CVLLLTDSSNGR*KVLTTLVVLKR
Trigger: CCGCTTCAACACCACCAAGGTTGTCAGCACCTTCAACCTGCCGTTGCTGCTGTCCGTGAGCAGCAGCACGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CCA 72 bp CGACGTAACCCCTTCCCACGAGCTCCACCTTCACTATaGGGTCCACCAGGGTGCTGTTCAGGGTTAAGATCA +
Preference number: 6 (lower is better)
Translates to: RRNPFPRAPPSL*GPPGCCSGLRS
Trigger: TGATCTTAACCCTGAACAGCACCCTGGTGGACCCCATAGTGAAGGTGGAGCTCGTGGGAAGGGGTTACGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CCA 72 bp CGCTCTGCACTGGGCGTGAAGCCCTCGTACTGTATGTaGGCATACAGGGCGAATACGACCGTCTTGATGCAT +
Preference number: 6 (lower is better)
Translates to: RSALGVKPSYCM*AYRANTTVLMH
Trigger: ATGCATCAAGACGGTCGTATTCGCCCTGTATGCCCACATACAGTACGAGGGCTTCACGCCCAGTGCAGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CCA 72 bp ACCTTCTCTCCTGGCGTGAAGGTGTTCCTTTCCATCTaGATTTGCAAACAGACAGTGCCCTGGCGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: TFSPGVKVFLSI*ICKQTVPWRQQ
Trigger: CTGCTGCCGCCAGGGCACTGTCTGTTTGCAAATCCAGATGGAAAGGAACACCTTCACGCCAGGAGAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS GCA 72 bp GGGTGCTGTTCAGGGTTAAGATCACCTGCCCTTTTATaGTGGAGCCAGCCAGGTAGATTCTATCCTCGGGCA +
Preference number: 6 (lower is better)
Translates to: GCCSGLRSPALL*WSQPGRFYPRA
Trigger: TGCCCGAGGATAGAATCTACCTGGCTGGCTCCAGCATAAAAGGGCAGGTGATCTTAACCCTGAACAGCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 72 bp CTCTCCTGGCGTGAAGGTGTTCCTTTCCATCTGGATTaGCAAACAGACAGTGCCCTGGCGGCAGCAGTTGTA +
Preference number: 6 (lower is better)
Translates to: LSWREGVPFHLD*QTDSALAAAVV
Trigger: TACAACTGCTGCCGCCAGGGCACTGTCTGTTTGCAAATCCAGATGGAAAGGAACACCTTCACGCCAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CCA 72 bp TGCTGTTCAGGGTTAAGATCACCTGCCCTTTTATGCTaGAGCCAGCCAGGTAGATTCTATCCTCGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: CCSGLRSPALLC*SQPGRFYPRAA
Trigger: TGCTGCCCGAGGATAGAATCTACCTGGCTGGCTCCAGCATAAAAGGGCAGGTGATCTTAACCCTGAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 90 bp TACAGGGCGAATACGACCGTCTTGATGCATTTGCTGGTCTGGTTGTaGATCTCTGTTGTGAAGACGACCTTCTCTCCTGGCGTGAAGGTG +
Preference number: 6 (lower is better)
Translates to: YRANTTVLMHLLVWL*ISVVKTTFSPGVKV
Trigger: CACCTTCACGCCAGGAGAGAAGGTCGTCTTCACAACAGAGATCAACAACCAGACCAGCAAATGCATCAAGACGGTCGTATTCGCCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 90 bp GCATACAGGGCGAATACGACCGTCTTGATGCATTTGCTGGTCTGGTaGTTGATCTCTGTTGTGAAGACGACCTTCTCTCCTGGCGTGAAG +
Preference number: 6 (lower is better)
Translates to: AYRANTTVLMHLLVW*LISVVKTTFSPGVK
Trigger: CTTCACGCCAGGAGAGAAGGTCGTCTTCACAACAGAGATCAACAACCAGACCAGCAAATGCATCAAGACGGTCGTATTCGCCCTGTATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS GCA 72 bp AGGTGTTCCTTTCCATCTGGATTTGCAAACAGACAGTaGCCTGGCGGCAGCAGTTGTAGGAGACTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: RCSFPSGFANRQ*PGGSSCRRLSP
Trigger: AGGAGAAAGTCTCCTACAACTGCTGCCGCCAGGGCACTGTCTGTTTGCAAATCCAGATGGAAAGGAACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 90 bp AAGCCCTCGTACTGTATGTGGGCATACAGGGCGAATACGACCGTCTaGATGCATTTGCTGGTCTGGTTGTTGATCTCTGTTGTGAAGACG +
Preference number: 6 (lower is better)
Translates to: KPSYCMWAYRANTTV*MHLLVWLLISVVKT
Trigger: CGTCTTCACAACAGAGATCAACAACCAGACCAGCAAATGCATCAAGACGGTCGTATTCGCCCTGTATGCCCACATACAGTACGAGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CCA 72 bp AGCCTGGGAGGTAAGTTGAAATGGAAGTCAAAGGTGTaGCTGCCTGCACTTAACCAATTATCCTCCACTGGG +
Preference number: 6 (lower is better)
Translates to: SLGGKLKWKSKV*LPALNQLSSTG
Trigger: CCCAGTGGAGGATAATTGGTTAAGTGCAGGCAGCCACACCTTTGACTTCCATTTCAACTTACCTCCCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 72 bp TGGGCATACAGGGCGAATACGACCGTCTTGATGCATTaGCTGGTCTGGTTGTTGATCTCTGTTGTGAAGACG +
Preference number: 6 (lower is better)
Translates to: WAYRANTTVLMH*LVWLLISVVKT
Trigger: CGTCTTCACAACAGAGATCAACAACCAGACCAGCAAATGCATCAAGACGGTCGTATTCGCCCTGTATGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 72 bp AATACGACCGTCTTGATGCATTTGCTGGTCTGGTTGTaGATCTCTGTTGTGAAGACGACCTTCTCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: NTTVLMHLLVWL*ISVVKTTFSPG
Trigger: GCCAGGAGAGAAGGTCGTCTTCACAACAGAGATCAACAACCAGACCAGCAAATGCATCAAGACGGTCGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 72 bp GCGAATACGACCGTCTTGATGCATTTGCTGGTCTGGTaGTTGATCTCTGTTGTGAAGACGACCTTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: ANTTVLMHLLVW*LISVVKTTFSP
Trigger: AGGAGAGAAGGTCGTCTTCACAACAGAGATCAACAACCAGACCAGCAAATGCATCAAGACGGTCGTATTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS CAA 90 bp TACTGTATGTGGGCATACAGGGCGAATACGACCGTCTTGATGCATTaGCTGGTCTGGTTGTTGATCTCTGTTGTGAAGACGACCTTCTCT +
Preference number: 6 (lower is better)
Translates to: YCMWAYRANTTVLMH*LVWLLISVVKTTFS
Trigger: AGAGAAGGTCGTCTTCACAACAGAGATCAACAACCAGACCAGCAAATGCATCAAGACGGTCGTATTCGCCCTGTATGCCCACATACAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS TCA 72 bp TGGAATGGGGTTTCTTTGTGGAAGGTGGAAGTTCCTTaGACCAATAAGTACATCCTCTTCTTGGCTAAAATG +
Preference number: 6 (lower is better)
Translates to: WNGVSLWKVEVP*TNKYILFLAKM
Trigger: CATTTTAGCCAAGAAGAGGATGTACTTATTGGTTCAAGGAACTTCCACCTTCCACAAAGAAACCCCATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS GCA 72 bp ATAAGTACATCCTCTTCTTGGCTAAAATGTGTTCCCTaGCCATGCAGGAAGCTTGTACGAAATAGAAGACAT +
Preference number: 6 (lower is better)
Translates to: ISTSSSWLKCVP*PCRKLVRNRRH
Trigger: ATGTCTTCTATTTCGTACAAGCTTCCTGCATGGGCAGGGAACACATTTTAGCCAAGAAGAGGATGTACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2
CDS GCA 72 bp CTCCACTGGGAATGTCTTTGTCTTATGCACGTAGTCTaGCTTGTTGTTGCAAATAACATTTCTGCTATAATC +
Preference number: 6 (lower is better)
Translates to: LHWECLCLMHVV*LVVANNISAII
Trigger: GATTATAGCAGAAATGTTATTTGCAACAACAAGGCAGACTACGTGCATAAGACAAAGACATTCCCAGTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381781.2
ENST00000650722.2