RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARRDC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000105643

Ensembl transcript IDs: ENST00000222250.5, ENST00000379656.7, ENST00000593460.1, ENST00000593560.6, ENST00000594411.1, ENST00000595712.6, ENST00000596105.2, ENST00000600788.6, ENST00000608009.1, ENST00000683912.1

Found 390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGAGGTCAGCCCTTGGTCCAGCCACTCCCCACAGTCATGGTGGCTaGAAGCTGGTGTGCAACCTTGTTCCTCGAGGGGTCCCTGTGCCG +
Preference number: 1 (lower is better)
Translates to: GRSALGPATPHSHGG*KLVCNLVPRGVPVP
Trigger: CGGCACAGGGACCCCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGACCAAGGGCTGACCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR CCA 90 bp CCTGGGCCATGTAACACCCAGGCAGCTCTGATGCCCCTGGGTACTTaGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTGG +
Preference number: 1 (lower is better)
Translates to: PGPCNTQAALMPLGT*RSSQEVQACARNLW
Trigger: CCAGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTGTTACATGGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR GCA 90 bp GCGGCTGCCCCTGCCACCCACAGACTCCACATAGCTCTGACAACCTaGTTTCCTGAACGCCTCGTTCCTGGGTCCTTTCACCCACCAGAC +
Preference number: 1 (lower is better)
Translates to: AAAPATHRLHIALTT*FPERLVPGSFHPPD
Trigger: GTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTTCAGGAAAGCAGGTTGTCAGAGCTATGTGGAGTCTGTGGGTGGCAGGGGCAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR CCA 90 bp ACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTaGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTGCCCCTGCCACC +
Preference number: 1 (lower is better)
Translates to: TWRSSQEVQACARNL*LSKSSKAGAAAPAT
Trigger: GGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCAGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR CCA 90 bp CCAAGCCTGCGCCAGGAATCTCTGGCTTTCAAAGTCTTCAAAGGCTaGAGCGGCTGCCCCTGCCACCCACAGACTCCACATAGCTCTGAC +
Preference number: 1 (lower is better)
Translates to: PSLRQESLAFKVFKG*SGCPCHPQTPHSSD
Trigger: GTCAGAGCTATGTGGAGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCAGAGATTCCTGGCGCAGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR TCA 90 bp GTCCAGGTAAGTCAGATTCCAGCCGGGCTCTTCCTCTGTCCCATGTaGTATCCGAAAGGCCCCCGCCTCACTCTGAGACTTGGTTCCCCA +
Preference number: 1 (lower is better)
Translates to: VQVSQIPAGLFLCPM*YPKGPRLTLRLGSP
Trigger: TGGGGAACCAAGTCTCAGAGTGAGGCGGGGGCCTTTCGGATATCACATGGGACAGAGGAAGAGCCCGGCTGGAATCTGACTTACCTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR TCA 90 bp CCCTGCCACCCACAGACTCCACATAGCTCTGACAACCTGCTTTCCTaGACGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGT +
Preference number: 1 (lower is better)
Translates to: PCHPQTPHSSDNLLS*TPRSWVLSPTRPHC
Trigger: ACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTTCAGGAAAGCAGGTTGTCAGAGCTATGTGGAGTCTGTGGGTGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR GCA 90 bp CTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTaGGCCAGGAATCTCTGGCTTTCAAAGTCTTCAAAGGCTGGAGCG +
Preference number: 1 (lower is better)
Translates to: LMPLGTWRSSQEVQA*ARNLWLSKSSKAGA
Trigger: CGCTCCAGCCTTTGAAGACTTTGAAAGCCAGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR GCA 90 bp CGCCAGGAATCTCTGGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTaGCCCTGCCACCCACAGACTCCACATAGCTCTGACAACCTGCTT +
Preference number: 1 (lower is better)
Translates to: RQESLAFKVFKGWSG*PCHPQTPHSSDNLL
Trigger: AAGCAGGTTGTCAGAGCTATGTGGAGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCAGAGATTCCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR TCA 90 bp CACCAGACCTCACTGTGTGGCCTCAACTCTGAGGCACCTGCCCTCTaGACCCCCAGTTCTACAATAAACGGGGTGGATTCCAAACGTCAC +
Preference number: 1 (lower is better)
Translates to: HQTSLCGLNSEAPAL*TPSSTINGVDSKRH
Trigger: GTGACGTTTGGAATCCACCCCGTTTATTGTAGAACTGGGGGTTCAGAGGGCAGGTGCCTCAGAGTTGAGGCCACACAGTGAGGTCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR CCA 90 bp CGTTTAACAGGGAGCCCAGTGTTTTCACTTTGCACATTGGGTATCTaGTCTTGCCTGTCCTACCCTGAACCTGGGTTCCCTGGGCCATGT +
Preference number: 1 (lower is better)
Translates to: RLTGSPVFSLCTLGI*SCLSYPEPGFPGPC
Trigger: ACATGGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAACACTGGGCTCCCTGTTAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR GCA 90 bp GACAGGTTATTAAACAGTCTCTCGGATACTGCACTGGGCATTCAATaGCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGG +
Preference number: 1 (lower is better)
Translates to: DRLLNSLSDTALGIQ*LTRTAVQVSQIPAG
Trigger: CCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAATAACCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR GCA 90 bp ACCAATTGGCTGGGAAGACAGGTTATTAAACAGTCTCTCGGATACTaGACTGGGCATTCAATGCCTCACAAGGACAGCGGTCCAGGTAAG +
Preference number: 1 (lower is better)
Translates to: TNWLGRQVIKQSLGY*TGHSMPHKDSGPGK
Trigger: CTTACCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAATAACCTGTCTTCCCAGCCAATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR TCA 90 bp CACCCAGGCAGCTCTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAGACAACCTGCTTTCCTaGACGCCTCGTTCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: HPGSSDAPGYLEELPGSPDNLLS*TPRSWV
Trigger: GACCCAGGAACGAGGCGTTCAGGAAAGCAGGTTGTC...TGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR TCA 90 bp CGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACTCTTCCTCTGTCCCATGTaGTATCCGAAAGGCCCCCGC +
Preference number: 2 (lower is better)
Translates to: RLVPGSFHPPDLTVWPQLFLCPM*YPKGPR
Trigger: GCGGGGGCCTTTCGGATATCACATGGGACAGAGGAA...GAGTTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp AGACTGAAGGCTCCTAGGGGATTCCAGCACCACCAATTGGCTGGGAAGACAGGTGGGGAGGTCAGCCCTTaGTCCAGCCACTCCCCACAG +
Preference number: 2 (lower is better)
Translates to: RLKAPRGFQHHQLAGKTGGEVSP*SSHSPQ
Trigger: CTGTGGGGAGTGGCTGGACCAAGGGCTGACCTCCCC...ACCTGTCTTCCCAGCCAATTGGTGGTGCTGGAATCCCCTAGGAGCCTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp AAGTCAGATTCCAGCCGGGCTCTTCCTCTGTCCCATGTGATATCCGAAAGGCCCGGGGAGGTCAGCCCTTaGTCCAGCCACTCCCCACAG +
Preference number: 2 (lower is better)
Translates to: KSDSSRALPLSHVISERPGEVSP*SSHSPQ
Trigger: CTGTGGGGAGTGGCTGGACCAAGGGCTGACCTCCCC...GGGCCTTTCGGATATCACATGGGACAGAGGAAGAGCCCGGCTGGAATCTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR GCA 90 bp CGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACTCGCACTGGGCATTCAATaGCTCACAAGGACAGCGGTC +
Preference number: 2 (lower is better)
Translates to: RLVPGSFHPPDLTVWPQLALGIQ*LTRTAV
Trigger: GACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGC...GAGTTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR TCA 90 bp CTGGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTGCCCCTGCCACCCACAGACTTTGGTTCCCCAACTTTaGTGCAGTCGGGGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: LAFKVFKGWSGCPCHPQTLVPQL*CSRGGQ
Trigger: CTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAA...AGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR TCA 90 bp TTGGGTATCTGGTCTTGCCTGTCCTACCCTGAACCTGGGTTCCCTGGGCCATGTTTCCTCTGTCCCATGTaGTATCCGAAAGGCCCCCGC +
Preference number: 2 (lower is better)
Translates to: LGIWSCLSYPEPGFPGPCFLCPM*YPKGPR
Trigger: GCGGGGGCCTTTCGGATATCACATGGGACAGAGGAA...ACATGGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR GCA 90 bp GAGCTTGTCCAGCTGCCCCCTCTAATGCTTTTCTCCTCCAGGACACAGGGAGCCCAGGAAGTCCAAGCCTaGGCCAGGAATCTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: ELVQLPPLMLFSSRTQGAQEVQA*ARNLWL
Trigger: AAGCCAGAGATTCCTGGCGCAGGCTTGGACTTCCTG...GGCTCCCTGTGTCCTGGAGGAGAAAAGCATTAGAGGGGGCAGCTGGACAAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp GAGCTTGTCCAGCTGCCCCCTCTAATGCTTTTCTCCTCCAGGACACAGGGAGCCCACTCCCCACAGTCATaGTGGCTGAAAGCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: ELVQLPPLMLFSSRTQGAHSPQS*WLKAGV
Trigger: CACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG...GGCTCCCTGTGTCCTGGAGGAGAAAAGCATTAGAGGGGGCAGCTGGACAAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR GCA 90 bp CGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACTCCAGTCTCTCGGATACTaGACTGGGCATTCAATGCCT +
Preference number: 2 (lower is better)
Translates to: RLVPGSFHPPDLTVWPQLQSLGY*TGHSMP
Trigger: AGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTG...GAGTTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp TGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCCAGCACCACCAATTaGCTGGGAAGACAGGTTATT +
Preference number: 2 (lower is better)
Translates to: CPWVLGGAPRKSKPAPGISSTTN*LGRQVI
Trigger: AATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA...GATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR TCA 90 bp AGACTGAAGGCTCCTAGGGGATTCCAGCACCACCAATTGGCTGGGAAGACAGGTTTGGTTCCCCAACTTTaGTGCAGTCGGGGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: RLKAPRGFQHHQLAGKTGLVPQL*CSRGGQ
Trigger: CTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAA...ACCTGTCTTCCCAGCCAATTGGTGGTGCTGGAATCCCCTAGGAGCCTTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp GAGCTTGTCCAGCTGCCCCCTCTAATGCTTTTCTCCTCCAGGACACAGGGAGCCATGGTGGCTGAAAGCTaGTGTGCAACCTTGTTCCTC +
Preference number: 2 (lower is better)
Translates to: ELVQLPPLMLFSSRTQGAMVAES*CATLFL
Trigger: GAGGAACAAGGTTGCACACCAGCTTTCAGCCACCAT...GGCTCCCTGTGTCCTGGAGGAGAAAAGCATTAGAGGGGGCAGCTGGACAAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp CACCCAGGCAGCTCTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCATGCGCCAGGAATCTCTaGCTTTCAAAGTCTTCAAAG +
Preference number: 2 (lower is better)
Translates to: HPGSSDAPGYLEELPGSPCARNL*LSKSSK
Trigger: CTTTGAAGACTTTGAAAGCCAGAGATTCCTGGCGCA...TGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp TGGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTGCCCCTGCCACCCACAGACTCTCTCGGATACTGCACTaGGCATTCAATGCCTCACAA +
Preference number: 2 (lower is better)
Translates to: WLSKSSKAGAAAPATHRLSRILH*AFNASQ
Trigger: TTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGA...GAGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp GAACGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAATCCAGCACCACCAATTaGCTGGGAAGACAGGTTATT +
Preference number: 2 (lower is better)
Translates to: ERLVPGSFHPPDLTVWPQSSTTN*LGRQVI
Trigger: AATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA...TTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp ACAGGGAGCCCAGTGTTTTCACTTTGCACATTGGGTATCTGGTCTTGCCTGTCCAAAGTCTTCAAAGGCTaGAGCGGCTGCCCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: TGSPVFSLCTLGIWSCLSKVFKG*SGCPCH
Trigger: GTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTT...GGACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAACACTGGGCTCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR TCA 90 bp TACTCCAAAGCCTCAGCTAAAATGCCCTTTCCGCAAGGACGCCTTCTCTGCTTCCTGTTTCTCCCAGACTaGAGGCTCCTAGGGGATTCC +
Preference number: 2 (lower is better)
Translates to: YSKASAKMPFPQGRLLCFLFLPD*RLLGDS
Trigger: GGAATCCCCTAGGAGCCTTCAGTCTGGGAGAAACAG...GAAGCAGAGAAGGCGTCCTTGCGGAAAGGGCATTTTAGCTGAGGCTTTGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR TCA 90 bp GAACGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACTTCTTCTGGTTCTGTaGTGCTGGAACTGTCTATGT +
Preference number: 2 (lower is better)
Translates to: ERLVPGSFHPPDLTVWPQLLLVL*CWNCLC
Trigger: ACATAGACAGTTCCAGCATCACAGAACCAGAAGAAG...TTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR GCA 90 bp TACTCCAAAGCCTCAGCTAAAATGCCCTTTCCGCAAGGACGCCTTCTCTGCTTCGCACTGGGCATTCAATaGCTCACAAGGACAGCGGTC +
Preference number: 2 (lower is better)
Translates to: YSKASAKMPFPQGRLLCFALGIQ*LTRTAV
Trigger: GACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGC...GAAGCAGAGAAGGCGTCCTTGCGGAAAGGGCATTTTAGCTGAGGCTTTGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp ACAGGGAGCCCAGTGTTTTCACTTTGCACATTGGGTATCTGGTCTTGCCTGTCCCACTCCCCACAGTCATaGTGGCTGAAAGCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: TGSPVFSLCTLGIWSCLSHSPQS*WLKAGV
Trigger: CACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG...GGACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAACACTGGGCTCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp CTGGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTGCCCCTGCCACCCACAGACTGCACCACCAATTGGCTaGGAAGACAGGTTATTAAAC +
Preference number: 2 (lower is better)
Translates to: LAFKVFKGWSGCPCHPQTAPPIG*EDRLLN
Trigger: GTTTAATAACCTGTCTTCCCAGCCAATTGGTGGTGC...AGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR CAA 90 bp TTTCCGCAAGGACGCCTTCTCTGCTTCCTGTCTGGACTCTCACAGTaGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGTCTATG +
Preference number: 2 (lower is better)
Translates to: FPQGRLLCFLSGLSQ*QVSSSGSVMLELSM
Trigger: CATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGACAGGAAGCAGAGAAGGCGTCCTTGCGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp TTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGTCTATGTCTGGCTCTTCCCCACAGTCATGGTaGCTGAAAGCTGGTGTGCAA +
Preference number: 2 (lower is better)
Translates to: LQVSSSGSVMLELSMSGSSPQSW*LKAGVQ
Trigger: TTGCACACCAGCTTTCAGCCACCATGACTGTGGGGA...AGAGCCAGACATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp ACAGGGAGCCCAGTGTTTTCACTTTGCACATTGGGTATCTGGTCTTGCCTGTCCGCAGGTCTCTTCTTCTaGTTCTGTGATGCTGGAACT +
Preference number: 2 (lower is better)
Translates to: TGSPVFSLCTLGIWSCLSAGLFF*FCDAGT
Trigger: AGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGC...GGACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAACACTGGGCTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR CAA 90 bp ATTCTTCATCGTTTAACAGGGAGCCCAGTGTTTTCACTTTGCACATaGGGTATCTGGTCTTGCCTGTCCTACCCTGAACCTGGGTTCCCT +
Preference number: 2 (lower is better)
Translates to: ILHRLTGSPVFSLCT*GIWSCLSYPEPGFP
Trigger: AGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAACACTGGGCTCCCTGTTAAACGATGAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CCA 90 bp TCCAGCACCACCAATTGGCTGGGAAGACAGGTTATTAAACAGTCTCTCGGATACATGGTGGCTGAAAGCTaGTGTGCAACCTTGTTCCTC +
Preference number: 2 (lower is better)
Translates to: SSTTNWLGRQVIKQSLGYMVAES*CATLFL
Trigger: GAGGAACAAGGTTGCACACCAGCTTTCAGCCACCAT...GTATCCGAGAGACTGTTTAATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CAA 90 bp TTGGGTATCTGGTCTTGCCTGTCCTACCCTGAACCTGGGTTCCCTGGGCCATGTCGGGGAGGTCAGCCCTaGGTCCAGCCACTCCCCACA +
Preference number: 3 (lower is better)
Translates to: LGIWSCLSYPEPGFPGPCRGGQP*VQPLPT
Trigger: TGTGGGGAGTGGCTGGACCAAGGGCTGACCTCCCCG...ACATGGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR TCA 72 bp CTGGGTTCCCTGGGCCATGTAACACCCAGGCAGCTCTaGTGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAG +
Preference number: 3 (lower is better)
Translates to: LGSLGHVTPRQL*CPWVLGGAPRK
Trigger: CTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTGTTACATGGCCCAGGGAACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR TCA 72 bp GCCCTTGGTCCAGCCACTCCCCACAGTCATGGTGGCTaGAAGCTGGTGTGCAACCTTGTTCCTCGAGGGGTC +
Preference number: 3 (lower is better)
Translates to: ALGPATPHSHGG*KLVCNLVPRGV
Trigger: GACCCCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGACCAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR CCA 72 bp GTCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTaGTGTGCAACCTTGTTCCTCGAGGGGTCCCTGTGC +
Preference number: 3 (lower is better)
Translates to: VQPLPTVMVAES*CATLFLEGSLC
Trigger: GCACAGGGACCCCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR CCA 72 bp GTCAGCCCTTGGTCCAGCCACTCCCCACAGTCATGGTaGCTGAAAGCTGGTGTGCAACCTTGTTCCTCGAGG +
Preference number: 3 (lower is better)
Translates to: VSPWSSHSPQSW*LKAGVQPCSSR
Trigger: CCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGACCAAGGGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR CCA 72 bp GAGGTCAGCCCTTGGTCCAGCCACTCCCCACAGTCATaGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTCG +
Preference number: 3 (lower is better)
Translates to: EVSPWSSHSPQS*WLKAGVQPCSS
Trigger: CGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGACCAAGGGCTGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CAA 90 bp CTTCCTGTCTGGACTCTCACAGTTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTCGGGGAGGTCAGCCCTaGGTCCAGCCACTCCCCACA +
Preference number: 3 (lower is better)
Translates to: LPVWTLTVAGLFFWFCDARGGQP*VQPLPT
Trigger: TGTGGGGAGTGGCTGGACCAAGGGCTGACCTCCCCG...AGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGACAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CAA 90 bp GAGCTTGTCCAGCTGCCCCCTCTAATGCTTTTCTCCTCCAGGACACAGGGAGCCCTTGGTTCCCCAACTTaGATGCAGTCGGGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: ELVQLPPLMLFSSRTQGALGSPT*MQSGRS
Trigger: TGACCTCCCCGACTGCATCAAAGTTGGGGAACCAAG...GGCTCCCTGTGTCCTGGAGGAGAAAAGCATTAGAGGGGGCAGCTGGACAAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR CCA 72 bp CGCCAGGAATCTCTGGCTTTCAAAGTCTTCAAAGGCTaGAGCGGCTGCCCCTGCCACCCACAGACTCCACAT +
Preference number: 3 (lower is better)
Translates to: RQESLAFKVFKG*SGCPCHPQTPH
Trigger: ATGTGGAGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCAGAGATTCCTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR TCA 72 bp AGTCAGATTCCAGCCGGGCTCTTCCTCTGTCCCATGTaGTATCCGAAAGGCCCCCGCCTCACTCTGAGACTT +
Preference number: 3 (lower is better)
Translates to: SQIPAGLFLCPM*YPKGPRLTLRL
Trigger: AAGTCTCAGAGTGAGGCGGGGGCCTTTCGGATATCACATGGGACAGAGGAAGAGCCCGGCTGGAATCTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR GCA 72 bp GCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTGCCCCTaGCACCCACAGACTCCACATAGCTCTGACAACCTG +
Preference number: 3 (lower is better)
Translates to: AFKVFKGWSGCP*HPQTPHSSDNL
Trigger: CAGGTTGTCAGAGCTATGTGGAGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR GCA 72 bp TCTCTGGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTaGCCCTGCCACCCACAGACTCCACATAGCTCTGAC +
Preference number: 3 (lower is better)
Translates to: SLAFKVFKGWSG*PCHPQTPHSSD
Trigger: GTCAGAGCTATGTGGAGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR TCA 72 bp TCACTGTGTGGCCTCAACTCTGAGGCACCTGCCCTCTaGACCCCCAGTTCTACAATAAACGGGGTGGATTCC +
Preference number: 3 (lower is better)
Translates to: SLCGLNSEAPAL*TPSSTINGVDS
Trigger: GGAATCCACCCCGTTTATTGTAGAACTGGGGGTTCAGAGGGCAGGTGCCTCAGAGTTGAGGCCACACAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR TCA 72 bp CCACAGACTCCACATAGCTCTGACAACCTGCTTTCCTaGACGCCTCGTTCCTGGGTCCTTTCACCCACCAGA +
Preference number: 3 (lower is better)
Translates to: PQTPHSSDNLLS*TPRSWVLSPTR
Trigger: TCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTTCAGGAAAGCAGGTTGTCAGAGCTATGTGGAGTCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR GCA 72 bp CCAGTGTTTTCACTTTGCACATTGGGTATCTGGTCTTaGCTGTCCTACCCTGAACCTGGGTTCCCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: PVFSLCTLGIWS*LSYPEPGFPGP
Trigger: TGGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR GCA 72 bp TCAGCTAAAATGCCCTTTCCGCAAGGACGCCTTCTCTaGTTCCTGTCTGGACTCTCACAGTTGCAGGTCTCT +
Preference number: 3 (lower is better)
Translates to: SAKMPFPQGRLL*FLSGLSQLQVS
Trigger: AGAGACCTGCAACTGTGAGAGTCCAGACAGGAAGCAGAGAAGGCGTCCTTGCGGAAAGGGCATTTTAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR-3UTR CAA 90 bp TTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGTCTATGTCTGGCTCTCTTGGTTCCCCAACTTaGATGCAGTCGGGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: LQVSSSGSVMLELSMSGSLGSPT*MQSGRS
Trigger: TGACCTCCCCGACTGCATCAAAGTTGGGGAACCAAG...AGAGCCAGACATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR CCA 72 bp CCTGTCTGGACTCTCACAGTTGCAGGTCTCTTCTTCTaGTTCTGTGATGCTGGAACTGTCTATGTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: PVWTLTVAGLFF*FCDAGTVYVWL
Trigger: GAGCCAGACATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGACAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR GCA 72 bp CTGGGAAGACAGGTTATTAAACAGTCTCTCGGATACTaGACTGGGCATTCAATGCCTCACAAGGACAGCGGT +
Preference number: 3 (lower is better)
Translates to: LGRQVIKQSLGY*TGHSMPHKDSG
Trigger: ACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAATAACCTGTCTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR GCA 72 bp GCTCTGACCTTCTCTGACCTTTATTCCTCATTCGTCTaGCTGCTGAGCTCCTATTCGTACTCCAAAGCCTCA +
Preference number: 3 (lower is better)
Translates to: ALTFSDLYSSFV*LLSSYSYSKAS
Trigger: TGAGGCTTTGGAGTACGAATAGGAGCTCAGCAGGCAGACGAATGAGGAATAAAGGTCAGAGAAGGTCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR TCA 72 bp GACTCTCACAGTTGCAGGTCTCTTCTTCTGGTTCTGTaGTGCTGGAACTGTCTATGTCTGGCTCTGTTTCTC +
Preference number: 3 (lower is better)
Translates to: DSHSCRSLLLVL*CWNCLCLALFL
Trigger: GAGAAACAGAGCCAGACATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR TCA 72 bp TCTGTCCCCAGGGGTGACGTAATGCTGTCACTGTCTTaGATTCTTCATCGTTTAACAGGGAGCCCAGTGTTT +
Preference number: 3 (lower is better)
Translates to: SVPRGDVMLSLS*ILHRLTGSPVF
Trigger: AAACACTGGGCTCCCTGTTAAACGATGAAGAATTCAAGACAGTGACAGCATTACGTCACCCCTGGGGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR GCA 72 bp TTAAACAGTCTCTCGGATACTGCACTGGGCATTCAATaGCTCACAAGGACAGCGGTCCAGGTAAGTCAGATT +
Preference number: 3 (lower is better)
Translates to: LNSLSDTALGIQ*LTRTAVQVSQI
Trigger: AATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR TCA 72 bp CCTTCTCTGACCTTTATTCCTCATTCGTCTGCCTGCTaGGCTCCTATTCGTACTCCAAAGCCTCAGCTAAAA +
Preference number: 3 (lower is better)
Translates to: PSLTFIPHSSAC*APIRTPKPQLK
Trigger: TTTTAGCTGAGGCTTTGGAGTACGAATAGGAGCTCAGCAGGCAGACGAATGAGGAATAAAGGTCAGAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CCGAAAGGCCCCCGCCTCACTCTGAGACTTGGTTCCCCAACTTTGATGCAGTCGCCTTGCCCGGCGTGCTaGGACCCAGGGCCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PKGPRLTLRLGSPTLMQSPCPAC*DPGPVQ
Trigger: CTGCACCGGCCCTGGGTCCCAGCACGCCGGGCAAGG...CGACTGCATCAAAGTTGGGGAACCAAGTCTCAGAGTGAGGCGGGGGCCTTTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCGCTCGCCCGCGAGGCTaGCCACCACTGCCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: CPWVLGGAPRKSKPAPGIARPRG*PPLPVS
Trigger: AGAAACGGGCAGTGGTGGCCAGCCTCGCGGGCGAGC...GATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCCTCATGTCGGGGTCCTaGGGAAGCGGGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: CPWVLGGAPRKSKPAPGILMSGS*GSGKGL
Trigger: GAGCCCCTTCCCGCTTCCGCAGGACCCCGACATGAG...GATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CACCCAGGCAGCTCTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCACTCATGTCGGGGTCCTaGGGAAGCGGGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: HPGSSDAPGYLEELPGSPLMSGS*GSGKGL
Trigger: GAGCCCCTTCCCGCTTCCGCAGGACCCCGACATGAG...TGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCAGTCCAGCAGGAAGCTaGCGTGGCTGCCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: CPWVLGGAPRKSKPAPGISPAGS*RGCPRW
Trigger: CCAGCGTGGGCAGCCACGCCAGCTTCCTGCTGGACT...GATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp AGACTGAAGGCTCCTAGGGGATTCCAGCACCACCAATTGGCTGGGAAGACAGGTTCCCGAGCCCCCGCTTaGGGTGCCAGCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RLKAPRGFQHHQLAGKTGSRAPA*GASRAG
Trigger: GCCAGCCCTGCTGGCACCTCAAGCGGGGGCTCGGGA...ACCTGTCTTCCCAGCCAATTGGTGGTGCTGGAATCCCCTAGGAGCCTTCAGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp GAGCTTGTCCAGCTGCCCCCTCTAATGCTTTTCTCCTCCAGGACACAGGGAGCCCGCTGGATACGGCGTTaGCGCCCACGCTGCGACCCT +
Preference number: 4 (lower is better)
Translates to: ELVQLPPLMLFSSRTQGARWIRR*RPRCDP
Trigger: AGGGTCGCAGCGTGGGCGTCAACGCCGTATCCAGCG...GGCTCCCTGTGTCCTGGAGGAGAAAAGCATTAGAGGGGGCAGCTGGACAAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS-3UTR GCA 90 bp CACCCAGGCAGCTCTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAGAGGCTGGCCACCACTaGCCGTTTCTGCTTTCGGGC +
Preference number: 4 (lower is better)
Translates to: HPGSSDAPGYLEELPGSPEAGHH*PFLLSG
Trigger: GCCCGAAAGCAGAAACGGGCAGTGGTGGCCAGCCTC...TGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCCTGGCGCCAGGAGCGTaGCGCGGTGGCTCACGACCT +
Preference number: 4 (lower is better)
Translates to: SSHSPQSWWLKAGVQPCSLAPGA*RGGSRP
Trigger: AGGTCGTGAGCCACCGCGCCACGCTCCTGGCGCCAG...GGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR CCA 90 bp AGACTGAAGGCTCCTAGGGGATTCCAGCACCACCAATTGGCTGGGAAGACAGGTCCTTGCCCGGCGTGCTaGGACCCAGGGCCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RLKAPRGFQHHQLAGKTGPCPAC*DPGPVQ
Trigger: CTGCACCGGCCCTGGGTCCCAGCACGCCGGGCAAGG...ACCTGTCTTCCCAGCCAATTGGTGGTGCTGGAATCCCCTAGGAGCCTTCAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp AACGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACGCTCGCCCGCGAGGCTaGCCACCACTGCCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: NASFLGPFTHQTSLCGLNARPRG*PPLPVS
Trigger: AGAAACGGGCAGTGGTGGCCAGCCTCGCGGGCGAGC...GTTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCCGTGGCTGCCCACGCTaGAGGAACGGCTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: CPWVLGGAPRKSKPAPGIRGCPR*RNGCQK
Trigger: CTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCACG...GATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACTCGGGGAGGTCAGCCCTTaGTCCAGCCACTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: RLVPGSFHPPDLTVWPQLGEVSP*SSHSPQ
Trigger: CTGTGGGGAGTGGCTGGACCAAGGGCTGACCTCCCC...GAGTTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp GAACGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACGCATGGCGCGCGGCTaGGGACACGGTTTGGACACG +
Preference number: 4 (lower is better)
Translates to: ERLVPGSFHPPDLTVWPQRMARG*GHGLDT
Trigger: CGTGTCCAAACCGTGTCCCCAGCCGCGCGCCATGCG...TTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS-3UTR TCA 90 bp CACCCAGGCAGCTCTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCACGGCAAAGACAGGGATaGCCTCTCCTGGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: HPGSSDAPGYLEELPGSPRQRQG*PLLGCS
Trigger: GCTACACCCCAGGAGAGGTCATCCCTGTCTTTGCCG...TGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp CACCCAGGCAGCTCTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAGCATATCAGAAATGCTaGGTCCCAGGCCGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: HPGSSDAPGYLEELPGSPAYQKC*VPGRGP
Trigger: AGGGCCCCGGCCTGGGACTCAGCATTTCTGATATGC...TGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTCGAGGTGCTCGAGCCCGCGCTaGGCGACTCGGTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: HSPQSWWLKAGVQPCSSRCSSPR*ATRSSA
Trigger: TGCACTGGACCGAGTCGCGCAGCGCGGGCTCGAGCA...CCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR GCA 90 bp ATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCTTCCTTCTGCGTGTAAGCCGTaGTCGAGCCCGCGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: MPHKDSGPGKSDSSRALPSACKP*SSPRCA
Trigger: CGCGCAGCGCGGGCTCGAGCACGGCTTACACGCAGA...AGGAAGAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR GCA 90 bp CTTGGTTCCCCAACTTTGATGCAGTCGGGGAGGTCAGCCCTTGGTCCAGCCACTTGTCTGCACCACGGCTaGCCGAGGCAGCACAGGACG +
Preference number: 4 (lower is better)
Translates to: LGSPTLMQSGRSALGPATCLHHG*PRQHRT
Trigger: CGTCCTGTGCTGCCTCGGGCAGCCGTGGTGCAGACA...AGTGGCTGGACCAAGGGCTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTGAGGCTGGCCACCACTaGCCGTTTCTGCTTTCGGGC +
Preference number: 4 (lower is better)
Translates to: PWVLGGAPRKSKPAPGISEAGHH*PFLLSG
Trigger: GCCCGAAAGCAGAAACGGGCAGTGGTGGCCAGCCTC...AGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TTGGGTATCTGGTCTTGCCTGTCCTACCCTGAACCTGGGTTCCCTGGGCCATGTGGAAGCTGGCGTGGCTaGCCACGCTGGAGGAACGGC +
Preference number: 4 (lower is better)
Translates to: LGIWSCLSYPEPGFPGPCGSWRG*PRWRNG
Trigger: GCCGTTCCTCCAGCGTGGGCAGCCACGCCAGCTTCC...ACATGGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TTGGGTATCTGGTCTTGCCTGTCCTACCCTGAACCTGGGTTCCCTGGGCCATGTAGGAGCGTGGCGCGGTaGCTCACGACCTCCACGCGT +
Preference number: 4 (lower is better)
Translates to: LGIWSCLSYPEPGFPGPCRSVAR*LTTSTR
Trigger: ACGCGTGGAGGTCGTGAGCCACCGCGCCACGCTCCT...ACATGGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR CCA 90 bp CCGAAAGGCCCCCGCCTCACTCTGAGACTTGGTTCCCCAACTTTGATGCAGTCGGATGGAAGGACCCACTaGGGGGATCCGCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PKGPRLTLRLGSPTLMQSDGRTH*GDPQCP
Trigger: CGGGCACTGCGGATCCCCCCAGTGGGTCCTTCCATC...CGACTGCATCAAAGTTGGGGAACCAAGTCTCAGAGTGAGGCGGGGGCCTTTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTCGTGGCTGCCCACGCTaGAGGAACGGCTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PWVLGGAPRKSKPAPGISRGCPR*RNGCQK
Trigger: CTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCACG...AGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp CGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACTCCGGCAAAGACAGGGATaGCCTCTCCTGGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: RLVPGSFHPPDLTVWPQLRQRQG*PLLGCS
Trigger: GCTACACCCCAGGAGAGGTCATCCCTGTCTTTGCCG...GAGTTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp TTGGGTATCTGGTCTTGCCTGTCCTACCCTGAACCTGGGTTCCCTGGGCCATGTGGGCGCCTCGGGCCATaGACGTCTGTGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LGIWSCLSYPEPGFPGPCGRLGP*TSVSAP
Trigger: TGGTGCAGACACAGACGTTCATGGCCCGAGGCGCCC...ACATGGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp TGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTTCCTCTGTCCCATGTaGTATCCGAAAGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: CPWVLGGAPRKSKPAPGIFLCPM*YPKGPR
Trigger: GCGGGGGCCTTTCGGATATCACATGGGACAGAGGAA...GATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTATGAACGTCTGTGTCTaGACCACGGCTGCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PWVLGGAPRKSKPAPGISMNVCV*TTAARG
Trigger: GCCTCGGGCAGCCGTGGTGCAGACACAGACGTTCAT...AGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACTCGCAGCACAGGACGTGTaGAGCCGTTGTCGATCTCGG +
Preference number: 4 (lower is better)
Translates to: RLVPGSFHPPDLTVWPQLAAQDV*SRCRSR
Trigger: CCGAGATCGACAACGGCTCCACACGTCCTGTGCTGC...GAGTTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTCGAGGGATGGAAGGACCCACTaGGGGGATCCGCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: HSPQSWWLKAGVQPCSSRDGRTH*GDPQCP
Trigger: CGGGCACTGCGGATCCCCCCAGTGGGTCCTTCCATC...CCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp GTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACAGCGGTCCAGGAGTCCAGCAGGAAGCTaGCGTGGCTGCCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: VSRILHWAFNASQGQRSRSPAGS*RGCPRW
Trigger: CCAGCGTGGGCAGCCACGCCAGCTTCCTGCTGGACT...CCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CACCCAGGCAGCTCTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAATGCCCCTGGGTACTTaGAGGAGCTCCCAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: HPGSSDAPGYLEELPGSPMPLGT*RSSQEV
Trigger: GACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCAT...TGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTCTGGGACTCTGCAGTTaGGAGCTTGTCCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PWVLGGAPRKSKPAPGISLGLCS*ELVQLP
Trigger: GGGCAGCTGGACAAGCTCCCAACTGCAGAGTCCCAG...AGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp ACAGGGAGCCCAGTGTTTTCACTTTGCACATTGGGTATCTGGTCTTGCCTGTCCCACACGCGCGGCGCTTaGCAGCTCCAGCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: TGSPVFSLCTLGIWSCLSHTRGA*QLQQHP
Trigger: CGGGTGCTGCTGGAGCTGTCAAGCGCCGCGCGTGTG...GGACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAACACTGGGCTCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR TCA 90 bp ATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCTTCCTGGGGCAGCTGGAAGCTaGACAGGAACTCATGGCGCC +
Preference number: 4 (lower is better)
Translates to: MPHKDSGPGKSDSSRALPGAAGS*TGTHGA
Trigger: GGCGCCATGAGTTCCTGTTCAGCTTCCAGCTGCCCC...AGGAAGAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp CACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTCGAGGGGGGCAGCTGGAAGCTaGACAGGAACTCATGGCGCC +
Preference number: 4 (lower is better)
Translates to: HSPQSWWLKAGVQPCSSRGAAGS*TGTHGA
Trigger: GGCGCCATGAGTTCCTGTTCAGCTTCCAGCTGCCCC...CCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp TGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCGAGGCACCTGCCCTCTaGACCCCCAGTTCTACAATA +
Preference number: 4 (lower is better)
Translates to: CPWVLGGAPRKSKPAPGIEAPAL*TPSSTI
Trigger: TATTGTAGAACTGGGGGTTCAGAGGGCAGGTGCCTC...GATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp GAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTGGCTTTCAAAGTCTTGCCTGTCCTACCCTaGACCTGGGTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EELPGSPSLRQESLAFKVLPVLP*TWVPWA
Trigger: GGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAA...GACTTTGAAAGCCAGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp AGACTGAAGGCTCCTAGGGGATTCCAGCACCACCAATTGGCTGGGAAGACAGGTAGCCCCCGCTTGAGGTaGCAGCAGGGCTGGCGTGTT +
Preference number: 4 (lower is better)
Translates to: RLKAPRGFQHHQLAGKTGSPRLR*QQGWRV
Trigger: AACACGCCAGCCCTGCTGGCACCTCAAGCGGGGGCT...ACCTGTCTTCCCAGCCAATTGGTGGTGCTGGAATCCCCTAGGAGCCTTCAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp ATTCAATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCTGTCTGCACCACGGCTaGCCGAGGCAGCACAGGACG +
Preference number: 4 (lower is better)
Translates to: IQCLTRTAVQVSQIPAGLCLHHG*PRQHRT
Trigger: CGTCCTGTGCTGCCTCGGGCAGCCGTGGTGCAGACA...GAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCATTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp ATTCAATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCAGCGGGAAGGGGCTCTaGCCCAAGGCTGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: IQCLTRTAVQVSQIPAGLSGKGL*PKAASS
Trigger: TGAGGAGGCAGCCTTGGGGCAGAGCCCCTTCCCGCT...GAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCATTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACAGCGGTCCAGGTAAGCGGGAAGGGGCTCTaGCCCAAGGCTGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSDTALGIQCLTRTAVQVSGKGL*PKAASS
Trigger: TGAGGAGGCAGCCTTGGGGCAGAGCCCCTTCCCGCT...TACCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCCTCAGAGTACAGGGGTaGCGGGCGGTAGCGGAACTC +
Preference number: 4 (lower is better)
Translates to: SSHSPQSWWLKAGVQPCSLRVQG*RAVAEL
Trigger: GAGTTCCGCTACCGCCCGCCACCCCTGTACTCTGAG...GGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp TTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGTCTATGTCTGGCTCTTCCCGAGCCCCCGCTTaGGGTGCCAGCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LQVSSSGSVMLELSMSGSSRAPA*GASRAG
Trigger: GCCAGCCCTGCTGGCACCTCAAGCGGGGGCTCGGGA...AGAGCCAGACATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp CACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTCGAGGGTGTGGCCTCAACTCTaGGGCACCTGCCCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: HSPQSWWLKAGVQPCSSRVWPQL*GTCPLN
Trigger: GTTCAGAGGGCAGGTGCCTCAGAGTTGAGGCCACAC...CCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp CTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACAGCGGTCCAGGTATTGCCTGTCCTACCCTaGACCTGGGTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSDTALGIQCLTRTAVQVLPVLP*TWVPWA
Trigger: GGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAA...TACCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp GAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTGGCTTTCAAAGTCGTCGCGCCGTCCAACTaGACCGAGAACGCTTTCACC +
Preference number: 4 (lower is better)
Translates to: EELPGSPSLRQESLAFKVVAPSN*TENAFT
Trigger: GGTGAAAGCGTTCTCGGTGCAGTTGGACGGCGCGAC...GACTTTGAAAGCCAGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR GCA 90 bp CACCCAGGCAGCTCTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAGGACACTACCGTGTTTaGCCTCGAAGGATGTCACCA +
Preference number: 4 (lower is better)
Translates to: HPGSSDAPGYLEELPGSPGHYRV*PRRMSP
Trigger: TGGTGACATCCTTCGAGGGCAAACACGGTAGTGTCC...TGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp ATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCTTCCTAGTGAACACCTTCCTTaGCCGGCGTGCTGGGACCCA +
Preference number: 4 (lower is better)
Translates to: MPHKDSGPGKSDSSRALPSEHLP*PACWDP
Trigger: TGGGTCCCAGCACGCCGGGCAAGGAAGGTGTTCACT...AGGAAGAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CTTGGTTCCCCAACTTTGATGCAGTCGGGGAGGTCAGCCCTTGGTCCAGCCACTCTGGGGTGTAGCCCTTaGGGTCGATCTTGGCCGAAA +
Preference number: 4 (lower is better)
Translates to: LGSPTLMQSGRSALGPATLGCSP*GRSWPK
Trigger: TTTCGGCCAAGATCGACCGCAAGGGCTACACCCCAG...AGTGGCTGGACCAAGGGCTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp GTCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCATGAACGTCTGTGTCTaGACCACGGCTGCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: VQPLPTVMVAESWCATLFMNVCV*TTAARG
Trigger: GCCTCGGGCAGCCGTGGTGCAGACACAGACGTTCAT...GAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp GAGCTTGTCCAGCTGCCCCCTCTAATGCTTTTCTCCTCCAGGACACAGGGAGCCGGTGCAAGGGAATGGTaGCGATCACCAGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ELVQLPPLMLFSSRTQGAGAREW*RSPVAA
Trigger: AGCTGCCACTGGTGATCGGCACCATTCCCTTGCACC...GGCTCCCTGTGTCCTGGAGGAGAAAAGCATTAGAGGGGGCAGCTGGACAAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CTGGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTGCCCCTGCCACCCACAGACTGGTGCAAGGGAATGGTaGCGATCACCAGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LAFKVFKGWSGCPCHPQTGAREW*RSPVAA
Trigger: AGCTGCCACTGGTGATCGGCACCATTCCCTTGCACC...AGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CTTGGTTCCCCAACTTTGATGCAGTCGGGGAGGTCAGCCCTTGGTCCAGCCACTCGGCTGCCAAAAGGGTaGAAGGGAATGGTGCCGATC +
Preference number: 4 (lower is better)
Translates to: LGSPTLMQSGRSALGPATRLPKG*KGMVPI
Trigger: GATCGGCACCATTCCCTTGCACCCTTTTGGCAGCCG...AGTGGCTGGACCAAGGGCTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CTTGGTTCCCCAACTTTGATGCAGTCGGGGAGGTCAGCCCTTGGTCCAGCCACTCGCTGGAGGAACGGCTaGCAAAAGGGTGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LGSPTLMQSGRSALGPATRWRNG*QKGARE
Trigger: TTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCG...AGTGGCTGGACCAAGGGCTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TTGGGTATCTGGTCTTGCCTGTCCTACCCTGAACCTGGGTTCCCTGGGCCATGTCCGTTCAGCAAGTCATaGAGCGCGGCCTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: LGIWSCLSYPEPGFPGPCPFSKS*SAASCP
Trigger: GGGACATGAGGCCGCGCTGCATGACTTGCTGAACGG...ACATGGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TCTGGACTCTCACAGTTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGGCTCCAGCGCGAAGCTaGGCACGCCCCCAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: SGLSQLQVSSSGSVMLELAPARS*ARPQSA
Trigger: TGCGCTCTGGGGGCGTGCGCAGCTTCGCGCTGGAGC...CAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS-3UTR CCA 90 bp TCTGGACTCTCACAGTTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGGGTCTCCCCGGTATCTaGCGCCAGGAGCGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: SGLSQLQVSSSGSVMLELGLPGI*RQERGA
Trigger: CGCGCCACGCTCCTGGCGCCAGATACCGGGGAGACC...CAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR CCA 90 bp GAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTGGCTTTCAAAGTCCTGAACAGGAACTCATaGCGCCCAGGAGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: EELPGSPSLRQESLAFKVLNRNS*RPGGSV
Trigger: GACGCTGCCTCCTGGGCGCCATGAGTTCCTGTTCAG...GACTTTGAAAGCCAGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CTTGGTTCCCCAACTTTGATGCAGTCGGGGAGGTCAGCCCTTGGTCCAGCCACTAGGGTCGGGGGCAGCTaGAAGCTGAACAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: LGSPTLMQSGRSALGPATRVGGS*KLNRNS
Trigger: TGAGTTCCTGTTCAGCTTCCAGCTGCCCCCGACCCT...AGTGGCTGGACCAAGGGCTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CACCCAGGCAGCTCTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCACATGTCCCCCAAGAGTaGGTTTGGATCCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: HPGSSDAPGYLEELPGSPHVPQE*VWILLR
Trigger: TCTGAGGAGGATCCAAACCCACTCTTGGGGGACATG...TGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp AACGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACAAAGTCTTCAAAGGCTaGAGCGGCTGCCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: NASFLGPFTHQTSLCGLNKVFKG*SGCPCH
Trigger: GTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTT...GTTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CTTGGTTCCCCAACTTTGATGCAGTCGGGGAGGTCAGCCCTTGGTCCAGCCACTATGCCCCTGGGTACTTaGAGGAGCTCCCAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LGSPTLMQSGRSALGPATMPLGT*RSSQEV
Trigger: GACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCAT...AGTGGCTGGACCAAGGGCTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTCGAGGCTGGGACTCTGCAGTTaGGAGCTTGTCCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HSPQSWWLKAGVQPCSSRLGLCS*ELVQLP
Trigger: GGGCAGCTGGACAAGCTCCCAACTGCAGAGTCCCAG...CCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACAGCGGTCCAGGTACAGGAGGCAGCGTCGTaGTCTCCCCGGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: LSDTALGIQCLTRTAVQVQEAAS*SPRYLG
Trigger: TCCGAGATACCGGGGAGACCACGACGCTGCCTCCTG...TACCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS-3UTR TCA 90 bp GTCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCGGTGCAGGGTGGCCTTaGTACAGTAGCGGACACTAC +
Preference number: 4 (lower is better)
Translates to: VQPLPTVMVAESWCATLFGAGWP*YSSGHY
Trigger: GTAGTGTCCGCTACTGTATCAAGGCCACCCTGCACC...GAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp ATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCTTCCTGGTGCAGGGTGGCCTTaGTACAGTAGCGGACACTAC +
Preference number: 4 (lower is better)
Translates to: MPHKDSGPGKSDSSRALPGAGWP*YSSGHY
Trigger: GTAGTGTCCGCTACTGTATCAAGGCCACCCTGCACC...AGGAAGAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp CTTGGTTCCCCAACTTTGATGCAGTCGGGGAGGTCAGCCCTTGGTCCAGCCACTTTGGTTCCCCAACTTTaGTGCAGTCGGGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LGSPTLMQSGRSALGPATLVPQL*CSRGGQ
Trigger: CTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAA...AGTGGCTGGACCAAGGGCTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp GTCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCTTCCTCTGTCCCATGTaGTATCCGAAAGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: VQPLPTVMVAESWCATLFFLCPM*YPKGPR
Trigger: GCGGGGGCCTTTCGGATATCACATGGGACAGAGGAA...GAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TACTCCAAAGCCTCAGCTAAAATGCCCTTTCCGCAAGGACGCCTTCTCTGCTTCGGGACCCAGGGCCGGTaGAGGGTGGCCTTGATACAG +
Preference number: 4 (lower is better)
Translates to: YSKASAKMPFPQGRLLCFGTQGR*RVALIQ
Trigger: CTGTATCAAGGCCACCCTGCACCGGCCCTGGGTCCC...GAAGCAGAGAAGGCGTCCTTGCGGAAAGGGCATTTTAGCTGAGGCTTTGGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp AAGTCAGATTCCAGCCGGGCTCTTCCTCTGTCCCATGTGATATCCGAAAGGCCCAGTGAACACCTTCCTTaGCCGGCGTGCTGGGACCCA +
Preference number: 4 (lower is better)
Translates to: KSDSSRALPLSHVISERPSEHLP*PACWDP
Trigger: TGGGTCCCAGCACGCCGGGCAAGGAAGGTGTTCACT...GGGCCTTTCGGATATCACATGGGACAGAGGAAGAGCCCGGCTGGAATCTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp ACCTGCCCTCTGAACCCCCAGTTCTACAATAAACGGGGTGGATTCCAAACGTCAAGCCCCCGCTTGAGGTaGCAGCAGGGCTGGCGTGTT +
Preference number: 4 (lower is better)
Translates to: TCPLNPQFYNKRGGFQTSSPRLR*QQGWRV
Trigger: AACACGCCAGCCCTGCTGGCACCTCAAGCGGGGGCT...TGACGTTTGGAATCCACCCCGTTTATTGTAGAACTGGGGGTTCAGAGGGCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp AACGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACTGTAGAACGCGGCAGTaGAGGATGGAAGGACCCACT +
Preference number: 4 (lower is better)
Translates to: NASFLGPFTHQTSLCGLNCRTRQ*RMEGPT
Trigger: AGTGGGTCCTTCCATCCTGCACTGCCGCGTTCTACA...GTTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TCTGGACTCTCACAGTTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGGGAAGCTGGCGTGGCTaGCCACGCTGGAGGAACGGC +
Preference number: 4 (lower is better)
Translates to: SGLSQLQVSSSGSVMLELGSWRG*PRWRNG
Trigger: GCCGTTCCTCCAGCGTGGGCAGCCACGCCAGCTTCC...CAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp ATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCTTCCTCTCGAGGGGTCCCTGTaGCGTTCAGCAAGTCATGCA +
Preference number: 4 (lower is better)
Translates to: MPHKDSGPGKSDSSRALPLEGSL*RSASHA
Trigger: TGCATGACTTGCTGAACGGCACAGGGACCCCTCGAG...AGGAAGAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCCTCGAGGGGTCCCTGTaGCGTTCAGCAAGTCATGCA +
Preference number: 4 (lower is better)
Translates to: SSHSPQSWWLKAGVQPCSLEGSL*RSASHA
Trigger: TGCATGACTTGCTGAACGGCACAGGGACCCCTCGAG...GGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTCAAGGACGCCTTCTCTaGTTCCTGTCTGGACTCTCA +
Preference number: 4 (lower is better)
Translates to: PWVLGGAPRKSKPAPGISQGRLL*FLSGLS
Trigger: TGAGAGTCCAGACAGGAAGCAGAGAAGGCGTCCTTG...AGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CCGAAAGGCCCCCGCCTCACTCTGAGACTTGGTTCCCCAACTTTGATGCAGTCGCAGGAAGTCCAAGCCTaGGCCAGGAATCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PKGPRLTLRLGSPTLMQSQEVQA*ARNLWL
Trigger: AAGCCAGAGATTCCTGGCGCAGGCTTGGACTTCCTG...CGACTGCATCAAAGTTGGGGAACCAAGTCTCAGAGTGAGGCGGGGGCCTTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CACCCAGGCAGCTCTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCATTGGGTATCTGGTCTTaGCTGTCCTACCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: HPGSSDAPGYLEELPGSPLGIWS*LSYPEP
Trigger: AGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAA...TGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTCGAGGCCTTGCGGTCGATCTTaGCCGAAAGGGAGACTAGGC +
Preference number: 4 (lower is better)
Translates to: HSPQSWWLKAGVQPCSSRPCGRS*PKGRLG
Trigger: GCCTAGTCTCCCTTTCGGCCAAGATCGACCGCAAGG...CCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp AAGTCAGATTCCAGCCGGGCTCTTCCTCTGTCCCATGTGATATCCGAAAGGCCCAGGGATGACCTCTCCTaGGGTGTAGCCCTTGCGGTC +
Preference number: 4 (lower is better)
Translates to: KSDSSRALPLSHVISERPRDDLS*GVALAV
Trigger: GACCGCAAGGGCTACACCCCAGGAGAGGTCATCCCT...GGGCCTTTCGGATATCACATGGGACAGAGGAAGAGCCCGGCTGGAATCTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp AGACTGAAGGCTCCTAGGGGATTCCAGCACCACCAATTGGCTGGGAAGACAGGTGCAGCACAGGACGTGTaGAGCCGTTGTCGATCTCGG +
Preference number: 4 (lower is better)
Translates to: RLKAPRGFQHHQLAGKTGAAQDV*SRCRSR
Trigger: CCGAGATCGACAACGGCTCCACACGTCCTGTGCTGC...ACCTGTCTTCCCAGCCAATTGGTGGTGCTGGAATCCCCTAGGAGCCTTCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CTTGGTTCCCCAACTTTGATGCAGTCGGGGAGGTCAGCCCTTGGTCCAGCCACTAAGGGTGCAAGGGAATaGTGCCGATCACCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LGSPTLMQSGRSALGPATKGARE*CRSPVA
Trigger: TGCCACTGGTGATCGGCACCATTCCCTTGCACCCTT...AGTGGCTGGACCAAGGGCTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCATGGTGGCTGAAAGCTaGTGTGCAACCTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: CPWVLGGAPRKSKPAPGIMVAES*CATLFL
Trigger: GAGGAACAAGGTTGCACACCAGCTTTCAGCCACCAT...GATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CTGGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTGCCCCTGCCACCCACAGACTCACTCCCCACAGTCATaGTGGCTGAAAGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LAFKVFKGWSGCPCHPQTHSPQS*WLKAGV
Trigger: CACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG...AGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TTGGGTATCTGGTCTTGCCTGTCCTACCCTGAACCTGGGTTCCCTGGGCCATGTAAAGTCTTCAAAGGCTaGAGCGGCTGCCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LGIWSCLSYPEPGFPGPCKVFKG*SGCPCH
Trigger: GTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTT...ACATGGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTGCACATTGGGTATCTaGTCTTGCCTGTCCTACCCT +
Preference number: 4 (lower is better)
Translates to: CPWVLGGAPRKSKPAPGICTLGI*SCLSYP
Trigger: AGGGTAGGACAGGCAAGACCAGATACCCAATGTGCA...GATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp TCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCCTGTTTCTCCCAGACTaGAGGCTCCTAGGGGATTCC +
Preference number: 4 (lower is better)
Translates to: SSHSPQSWWLKAGVQPCSLFLPD*RLLGDS
Trigger: GGAATCCCCTAGGAGCCTTCAGTCTGGGAGAAACAG...GGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp GAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTGGCTTTCAAAGTCGAGGCACCTGCCCTCTaGACCCCCAGTTCTACAATA +
Preference number: 4 (lower is better)
Translates to: EELPGSPSLRQESLAFKVEAPAL*TPSSTI
Trigger: TATTGTAGAACTGGGGGTTCAGAGGGCAGGTGCCTC...GACTTTGAAAGCCAGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp ATTCAATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCGACAACCTGCTTTCCTaGACGCCTCGTTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: IQCLTRTAVQVSQIPAGLDNLLS*TPRSWV
Trigger: GACCCAGGAACGAGGCGTTCAGGAAAGCAGGTTGTC...GAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCATTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp CACATAGCTCTGACAACCTGCTTTCCTGAACGCCTCGTTCCTGGGTCCTTTCACTGTGTCACCTTAGGCTaGCCTCTGTCCCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: HIALTTCFPERLVPGSFHCVTLG*PLSPGV
Trigger: CACCCCTGGGGACAGAGGTCAGCCTAAGGTGACACA...GTGAAAGGACCCAGGAACGAGGCGTTCAGGAAAGCAGGTTGTCAGAGCTATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGTCTATGTCTGGCTCTGCATCGCGTCCGGGGTaGGAACCCACGACAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LQVSSSGSVMLELSMSGSASRPG*EPTTGG
Trigger: TCCGCCTGTCGTGGGTTCGCACCCCGGACGCGATGC...AGAGCCAGACATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR GCA 90 bp CTTCCTGTCTGGACTCTCACAGTTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTACCACTGCCCGTTTCTaGTTTCGGGCGCCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: LPVWTLTVAGLFFWFCDATTARF*FRAPRA
Trigger: GGCCCGAGGCGCCCGAAAGCAGAAACGGGCAGTGGT...AGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGACAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCGCACTGGGCATTCAATaGCTCACAAGGACAGCGGTC +
Preference number: 4 (lower is better)
Translates to: SSHSPQSWWLKAGVQPCSALGIQ*LTRTAV
Trigger: GACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGC...GGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp GAGCTTGTCCAGCTGCCCCCTCTAATGCTTTTCTCCTCCAGGACACAGGGAGCCCAAGGACGCCTTCTCTaGTTCCTGTCTGGACTCTCA +
Preference number: 4 (lower is better)
Translates to: ELVQLPPLMLFSSRTQGAQGRLL*FLSGLS
Trigger: TGAGAGTCCAGACAGGAAGCAGAGAAGGCGTCCTTG...GGCTCCCTGTGTCCTGGAGGAGAAAAGCATTAGAGGGGGCAGCTGGACAAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TACTCCAAAGCCTCAGCTAAAATGCCCTTTCCGCAAGGACGCCTTCTCTGCTTCTGGAGCGGCTGCCCCTaGCACCCACAGACTCCACAT +
Preference number: 4 (lower is better)
Translates to: YSKASAKMPFPQGRLLCFWSGCP*HPQTPH
Trigger: ATGTGGAGTCTGTGGGTGGCAGGGGCAGCCGCTCCA...GAAGCAGAGAAGGCGTCCTTGCGGAAAGGGCATTTTAGCTGAGGCTTTGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp GAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTGGCTTTCAAAGTCCAGGAAGTCCAAGCCTaGGCCAGGAATCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: EELPGSPSLRQESLAFKVQEVQA*ARNLWL
Trigger: AAGCCAGAGATTCCTGGCGCAGGCTTGGACTTCCTG...GACTTTGAAAGCCAGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TCTGGACTCTCACAGTTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGCAGGAGGCAGCGTCGTaGTCTCCCCGGTATCTGGCG +
Preference number: 4 (lower is better)
Translates to: SGLSQLQVSSSGSVMLELQEAAS*SPRYLA
Trigger: CGCCAGATACCGGGGAGACCACGACGCTGCCTCCTG...CAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR CCA 90 bp GTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACAGCGGTCCAGGGCTCCAGCAGCAGCTTaGACGTTCCTGGGATATCCA +
Preference number: 4 (lower is better)
Translates to: VSRILHWAFNASQGQRSRAPAAA*TFLGYP
Trigger: TGGATATCCCAGGAACGTCCAAGCTGCTGCTGGAGC...CCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTCGAGGAAGGGTGCAAGGGAATaGTGCCGATCACCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: HSPQSWWLKAGVQPCSSRKGARE*CRSPVA
Trigger: TGCCACTGGTGATCGGCACCATTCCCTTGCACCCTT...CCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp GAGCTTGTCCAGCTGCCCCCTCTAATGCTTTTCTCCTCCAGGACACAGGGAGCCCCCCAAGAGTGGGTTTaGATCCTCCTCAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: ELVQLPPLMLFSSRTQGAPQEWV*ILLRVQ
Trigger: CTGTACTCTGAGGAGGATCCAAACCCACTCTTGGGG...GGCTCCCTGTGTCCTGGAGGAGAAAAGCATTAGAGGGGGCAGCTGGACAAGCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp GAGCTTGTCCAGCTGCCCCCTCTAATGCTTTTCTCCTCCAGGACACAGGGAGCCTCCCCACAGTCATGGTaGCTGAAAGCTGGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: ELVQLPPLMLFSSRTQGASPQSW*LKAGVQ
Trigger: TTGCACACCAGCTTTCAGCCACCATGACTGTGGGGA...GGCTCCCTGTGTCCTGGAGGAGAAAAGCATTAGAGGGGGCAGCTGGACAAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CTTGGTTCCCCAACTTTGATGCAGTCGGGGAGGTCAGCCCTTGGTCCAGCCACTTCCCCACAGTCATGGTaGCTGAAAGCTGGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: LGSPTLMQSGRSALGPATSPQSW*LKAGVQ
Trigger: TTGCACACCAGCTTTCAGCCACCATGACTGTGGGGA...AGTGGCTGGACCAAGGGCTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp TTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGTCTATGTCTGGCTCTGGGCGCCTCGGGCCATaGACGTCTGTGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LQVSSSGSVMLELSMSGSGRLGP*TSVSAP
Trigger: TGGTGCAGACACAGACGTTCATGGCCCGAGGCGCCC...AGAGCCAGACATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp ACCTGCCCTCTGAACCCCCAGTTCTACAATAAACGGGGTGGATTCCAAACGTCAGTGTGGCCTCAACTCTaGGGCACCTGCCCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: TCPLNPQFYNKRGGFQTSVWPQL*GTCPLN
Trigger: GTTCAGAGGGCAGGTGCCTCAGAGTTGAGGCCACAC...TGACGTTTGGAATCCACCCCGTTTATTGTAGAACTGGGGGTTCAGAGGGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TTGGGTATCTGGTCTTGCCTGTCCTACCCTGAACCTGGGTTCCCTGGGCCATGTGGACACTACCGTGTTTaGCCTCGAAGGATGTCACCA +
Preference number: 4 (lower is better)
Translates to: LGIWSCLSYPEPGFPGPCGHYRV*PRRMSP
Trigger: TGGTGACATCCTTCGAGGGCAAACACGGTAGTGTCC...ACATGGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TCCAGCACCACCAATTGGCTGGGAAGACAGGTTATTAAACAGTCTCTCGGATACGGGACCCAGGGCCGGTaGAGGGTGGCCTTGATACAG +
Preference number: 4 (lower is better)
Translates to: SSTTNWLGRQVIKQSLGYGTQGR*RVALIQ
Trigger: CTGTATCAAGGCCACCCTGCACCGGCCCTGGGTCCC...GTATCCGAGAGACTGTTTAATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGTCTATGTCTGGCTCTACCACTGCCCGTTTCTaGTTTCGGGCGCCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: LQVSSSGSVMLELSMSGSTTARF*FRAPRA
Trigger: GGCCCGAGGCGCCCGAAAGCAGAAACGGGCAGTGGT...AGAGCCAGACATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp ATTCAATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCTGTAGAACGCGGCAGTaGAGGATGGAAGGACCCACT +
Preference number: 4 (lower is better)
Translates to: IQCLTRTAVQVSQIPAGLCRTRQ*RMEGPT
Trigger: AGTGGGTCCTTCCATCCTGCACTGCCGCGTTCTACA...GAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCATTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp AACGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACCAGTCTCTCGGATACTaGACTGGGCATTCAATGCCT +
Preference number: 4 (lower is better)
Translates to: NASFLGPFTHQTSLCGLNQSLGY*TGHSMP
Trigger: AGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTG...GTTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CTTCCTGTCTGGACTCTCACAGTTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTTGGAGCGGCTGCCCCTaGCACCCACAGACTCCACAT +
Preference number: 4 (lower is better)
Translates to: LPVWTLTVAGLFFWFCDAWSGCP*HPQTPH
Trigger: ATGTGGAGTCTGTGGGTGGCAGGGGCAGCCGCTCCA...AGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGACAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp GAGCTTGTCCAGCTGCCCCCTCTAATGCTTTTCTCCTCCAGGACACAGGGAGCCTTGGGTATCTGGTCTTaGCTGTCCTACCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: ELVQLPPLMLFSSRTQGALGIWS*LSYPEP
Trigger: AGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAA...GGCTCCCTGTGTCCTGGAGGAGAAAAGCATTAGAGGGGGCAGCTGGACAAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TCTGGACTCTCACAGTTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGACGACAGGCGGAACCTaGCCTCGAACTCGCGAACCG +
Preference number: 4 (lower is better)
Translates to: SGLSQLQVSSSGSVMLELTTGGT*PRTREP
Trigger: CGGTTCGCGAGTTCGAGGCCAGGTTCCGCCTGTCGT...CAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR CCA 90 bp TGGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTGCCCCTGCCACCCACAGACTCCAGCTTGGACGTTCCTaGGATATCCACACAGACCTT +
Preference number: 4 (lower is better)
Translates to: WLSKSSKAGAAAPATHRLQLGRS*DIHTDL
Trigger: AAGGTCTGTGTGGATATCCCAGGAACGTCCAAGCTG...GAGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp AGACTGAAGGCTCCTAGGGGATTCCAGCACCACCAATTGGCTGGGAAGACAGGTGCTCCAGCAGCAGCTTaGACGTTCCTGGGATATCCA +
Preference number: 4 (lower is better)
Translates to: RLKAPRGFQHHQLAGKTGAPAAA*TFLGYP
Trigger: TGGATATCCCAGGAACGTCCAAGCTGCTGCTGGAGC...ACCTGTCTTCCCAGCCAATTGGTGGTGCTGGAATCCCCTAGGAGCCTTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TCTGGACTCTCACAGTTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGCTCAGAGTACAGGGGTaGCGGGCGGTAGCGGAACTC +
Preference number: 4 (lower is better)
Translates to: SGLSQLQVSSSGSVMLELLRVQG*RAVAEL
Trigger: GAGTTCCGCTACCGCCCGCCACCCCTGTACTCTGAG...CAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp GTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACAGCGGTCCAGGCATGTCCCCCAAGAGTaGGTTTGGATCCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VSRILHWAFNASQGQRSRHVPQE*VWILLR
Trigger: TCTGAGGAGGATCCAAACCCACTCTTGGGGGACATG...CCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CCGAAAGGCCCCCGCCTCACTCTGAGACTTGGTTCCCCAACTTTGATGCAGTCGATGGTGGCTGAAAGCTaGTGTGCAACCTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PKGPRLTLRLGSPTLMQSMVAES*CATLFL
Trigger: GAGGAACAAGGTTGCACACCAGCTTTCAGCCACCAT...CGACTGCATCAAAGTTGGGGAACCAAGTCTCAGAGTGAGGCGGGGGCCTTTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp GAACGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAATGCACATTGGGTATCTaGTCTTGCCTGTCCTACCCT +
Preference number: 4 (lower is better)
Translates to: ERLVPGSFHPPDLTVWPQCTLGI*SCLSYP
Trigger: AGGGTAGGACAGGCAAGACCAGATACCCAATGTGCA...TTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp ACAGGGAGCCCAGTGTTTTCACTTTGCACATTGGGTATCTGGTCTTGCCTGTCCCGCTGGAGGAACGGCTaGCAAAAGGGTGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: TGSPVFSLCTLGIWSCLSRWRNG*QKGARE
Trigger: TTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCG...GGACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAACACTGGGCTCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TCCAGCACCACCAATTGGCTGGGAAGACAGGTTATTAAACAGTCTCTCGGATACGCTCTGCCCCAAGGCTaGCTCCTCAGTGTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: SSTTNWLGRQVIKQSLGYALPQG*LLSVGY
Trigger: GTAGCCGACACTGAGGAGGCAGCCTTGGGGCAGAGC...GTATCCGAGAGACTGTTTAATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CACCCAGGCAGCTCTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCACCAGTGTTTTCACTTTaGACATTGGGTATCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HPGSSDAPGYLEELPGSPPVFSL*TLGIWS
Trigger: AGACCAGATACCCAATGTGCAAAGTGAAAACACTGG...TGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TCTGGACTCTCACAGTTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGCTGAACAGGAACTCATaGCGCCCAGGAGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SGLSQLQVSSSGSVMLELLNRNS*RPGGSV
Trigger: GACGCTGCCTCCTGGGCGCCATGAGTTCCTGTTCAG...CAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TACTCCAAAGCCTCAGCTAAAATGCCCTTTCCGCAAGGACGCCTTCTCTGCTTCCCTTGCGGTCGATCTTaGCCGAAAGGGAGACTAGGC +
Preference number: 4 (lower is better)
Translates to: YSKASAKMPFPQGRLLCFPCGRS*PKGRLG
Trigger: GCCTAGTCTCCCTTTCGGCCAAGATCGACCGCAAGG...GAAGCAGAGAAGGCGTCCTTGCGGAAAGGGCATTTTAGCTGAGGCTTTGGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp GACAGGTTATTAAACAGTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACAGGGGAGGTCAGCCCTTaGTCCAGCCACTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: DRLLNSLSDTALGIQCLTGEVSP*SSHSPQ
Trigger: CTGTGGGGAGTGGCTGGACCAAGGGCTGACCTCCCC...TGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAATAACCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp GAACGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACCTCACTCTGAGACTTaGTTCCCCAACTTTGATGCA +
Preference number: 4 (lower is better)
Translates to: ERLVPGSFHPPDLTVWPQPHSET*FPNFDA
Trigger: TGCATCAAAGTTGGGGAACCAAGTCTCAGAGTGAGG...TTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TGGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTGCCCCTGCCACCCACAGACTCGCAGGTCTCTTCTTCTaGTTCTGTGATGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: WLSKSSKAGAAAPATHRLAGLFF*FCDAGT
Trigger: AGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGC...GAGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp AAGTCAGATTCCAGCCGGGCTCTTCCTCTGTCCCATGTGATATCCGAAAGGCCCTATCCACACAGACCTTaGGTGCGTAGTCCACGTGTA +
Preference number: 4 (lower is better)
Translates to: KSDSSRALPLSHVISERPYPHRP*VRSPRV
Trigger: TACACGTGGACTACGCACTCAAGGTCTGTGTGGATA...GGGCCTTTCGGATATCACATGGGACAGAGGAAGAGCCCGGCTGGAATCTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp AGACTGAAGGCTCCTAGGGGATTCCAGCACCACCAATTGGCTGGGAAGACAGGTTATCCACACAGACCTTaGGTGCGTAGTCCACGTGTA +
Preference number: 4 (lower is better)
Translates to: RLKAPRGFQHHQLAGKTGYPHRP*VRSPRV
Trigger: TACACGTGGACTACGCACTCAAGGTCTGTGTGGATA...ACCTGTCTTCCCAGCCAATTGGTGGTGCTGGAATCCCCTAGGAGCCTTCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp CTGGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTGCCCCTGCCACCCACAGACTCTTCTTCTGGTTCTGTaGTGCTGGAACTGTCTATGT +
Preference number: 4 (lower is better)
Translates to: LAFKVFKGWSGCPCHPQTLLLVL*CWNCLC
Trigger: ACATAGACAGTTCCAGCATCACAGAACCAGAAGAAG...AGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp TCCAGCACCACCAATTGGCTGGGAAGACAGGTTATTAAACAGTCTCTCGGATACTGTGTCACCTTAGGCTaGCCTCTGTCCCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SSTTNWLGRQVIKQSLGYCVTLG*PLSPGV
Trigger: CACCCCTGGGGACAGAGGTCAGCCTAAGGTGACACA...GTATCCGAGAGACTGTTTAATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp TTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGTCTATGTCTGGCTCTGCATATCAGAAATGCTaGGTCCCAGGCCGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LQVSSSGSVMLELSMSGSAYQKC*VPGRGP
Trigger: AGGGCCCCGGCCTGGGACTCAGCATTTCTGATATGC...AGAGCCAGACATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp AAGTCAGATTCCAGCCGGGCTCTTCCTCTGTCCCATGTGATATCCGAAAGGCCCTCAAGATGCCGACGCTaGAGCCTCAGAACGCAAAAT +
Preference number: 4 (lower is better)
Translates to: KSDSSRALPLSHVISERPSRCRR*SLRTQN
Trigger: ATTTTGCGTTCTGAGGCTGCAGCGTCGGCATCTTGA...GGGCCTTTCGGATATCACATGGGACAGAGGAAGAGCCCGGCTGGAATCTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR GCA 90 bp GTTATTAAACAGTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACGCTCTGCCCCAAGGCTaGCTCCTCAGTGTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: VIKQSLGYCTGHSMPHKDALPQG*LLSVGY
Trigger: GTAGCCGACACTGAGGAGGCAGCCTTGGGGCAGAGC...GTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGTCTATGTCTGGCTCTCCGTTCAGCAAGTCATaGAGCGCGGCCTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: LQVSSSGSVMLELSMSGSPFSKS*SAASCP
Trigger: GGGACATGAGGCCGCGCTGCATGACTTGCTGAACGG...AGAGCCAGACATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTCGAGGATAGCTCTGACAACCTaGTTTCCTGAACGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: HSPQSWWLKAGVQPCSSRIALTT*FPERLV
Trigger: AACGAGGCGTTCAGGAAAGCAGGTTGTCAGAGCTAT...CCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TCCAGCACCACCAATTGGCTGGGAAGACAGGTTATTAAACAGTCTCTCGGATACAGGGATGACCTCTCCTaGGGTGTAGCCCTTGCGGTC +
Preference number: 4 (lower is better)
Translates to: SSTTNWLGRQVIKQSLGYRDDLS*GVALAV
Trigger: GACCGCAAGGGCTACACCCCAGGAGAGGTCATCCCT...GTATCCGAGAGACTGTTTAATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp ATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCTTCCTGCAGGTCTCTTCTTCTaGTTCTGTGATGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: MPHKDSGPGKSDSSRALPAGLFF*FCDAGT
Trigger: AGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGC...AGGAAGAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGTCTATGTCTGGCTCTGCTGGGGACACGGTTTaGACACGCGGAGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LQVSSSGSVMLELSMSGSAGDTV*TRGEKA
Trigger: TGCCTTCTCTCCGCGTGTCCAAACCGTGTCCCCAGC...AGAGCCAGACATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS-3UTR TCA 90 bp CTTCCTGTCTGGACTCTCACAGTTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTCTGTTTCTCCCAGACTaGAGGCTCCTAGGGGATTCC +
Preference number: 4 (lower is better)
Translates to: LPVWTLTVAGLFFWFCDALFLPD*RLLGDS
Trigger: GGAATCCCCTAGGAGCCTTCAGTCTGGGAGAAACAG...AGCATCACAGAACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGACAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp TCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCAGCTCTGACCTTCTCTaGCCTTTATTCCTCATTCGT +
Preference number: 4 (lower is better)
Translates to: SSHSPQSWWLKAGVQPCSSSDLL*PLFLIR
Trigger: ACGAATGAGGAATAAAGGTCAGAGAAGGTCAGAGCT...GGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp GTTATTAAACAGTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACACCGGCAGCTCAAGATaGCGACGCTGCAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VIKQSLGYCTGHSMPHKDTGSSR*RRCSLR
Trigger: TCTGAGGCTGCAGCGTCGGCATCTTGAGCTGCCGGT...GTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR GCA 90 bp TCCAGCACCACCAATTGGCTGGGAAGACAGGTTATTAAACAGTCTCTCGGATACCGGCTGCCAAAAGGGTaGAAGGGAATGGTGCCGATC +
Preference number: 4 (lower is better)
Translates to: SSTTNWLGRQVIKQSLGYRLPKG*KGMVPI
Trigger: GATCGGCACCATTCCCTTGCACCCTTTTGGCAGCCG...GTATCCGAGAGACTGTTTAATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp GAGCTTGTCCAGCTGCCCCCTCTAATGCTTTTCTCCTCCAGGACACAGGGAGCCCCAGTGTTTTCACTTTaGACATTGGGTATCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ELVQLPPLMLFSSRTQGAPVFSL*TLGIWS
Trigger: AGACCAGATACCCAATGTGCAAAGTGAAAACACTGG...GGCTCCCTGTGTCCTGGAGGAGAAAAGCATTAGAGGGGGCAGCTGGACAAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TCCAGCACCACCAATTGGCTGGGAAGACAGGTTATTAAACAGTCTCTCGGATACAGGGTCGGGGGCAGCTaGAAGCTGAACAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: SSTTNWLGRQVIKQSLGYRVGGS*KLNRNS
Trigger: TGAGTTCCTGTTCAGCTTCCAGCTGCCCCCGACCCT...GTATCCGAGAGACTGTTTAATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp ACCTGCCCTCTGAACCCCCAGTTCTACAATAAACGGGGTGGATTCCAAACGTCACCCCAAGAGTGGGTTTaGATCCTCCTCAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: TCPLNPQFYNKRGGFQTSPQEWV*ILLRVQ
Trigger: CTGTACTCTGAGGAGGATCCAAACCCACTCTTGGGG...TGACGTTTGGAATCCACCCCGTTTATTGTAGAACTGGGGGTTCAGAGGGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp ATTCAATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCCCTCACTCTGAGACTTaGTTCCCCAACTTTGATGCA +
Preference number: 4 (lower is better)
Translates to: IQCLTRTAVQVSQIPAGLPHSET*FPNFDA
Trigger: TGCATCAAAGTTGGGGAACCAAGTCTCAGAGTGAGG...GAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCATTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp CTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACAGCGGTCCAGGTATCTCGGATACTGCACTaGGCATTCAATGCCTCACAA +
Preference number: 4 (lower is better)
Translates to: LSDTALGIQCLTRTAVQVSRILH*AFNASQ
Trigger: TTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGA...TACCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TTGGGTATCTGGTCTTGCCTGTCCTACCCTGAACCTGGGTTCCCTGGGCCATGTGCACCACCAATTGGCTaGGAAGACAGGTTATTAAAC +
Preference number: 4 (lower is better)
Translates to: LGIWSCLSYPEPGFPGPCAPPIG*EDRLLN
Trigger: GTTTAATAACCTGTCTTCCCAGCCAATTGGTGGTGC...ACATGGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp AAGTCAGATTCCAGCCGGGCTCTTCCTCTGTCCCATGTGATATCCGAAAGGCCCTCCAGCACCACCAATTaGCTGGGAAGACAGGTTATT +
Preference number: 4 (lower is better)
Translates to: KSDSSRALPLSHVISERPSSTTN*LGRQVI
Trigger: AATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA...GGGCCTTTCGGATATCACATGGGACAGAGGAAGAGCCCGGCTGGAATCTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTGCGCCAGGAATCTCTaGCTTTCAAAGTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SSHSPQSWWLKAGVQPCSCARNL*LSKSSK
Trigger: CTTTGAAGACTTTGAAAGCCAGAGATTCCTGGCGCA...GGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp TCCAGCACCACCAATTGGCTGGGAAGACAGGTTATTAAACAGTCTCTCGGATACTTGGTTCCCCAACTTTaGTGCAGTCGGGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SSTTNWLGRQVIKQSLGYLVPQL*CSRGGQ
Trigger: CTGACCTCCCCGACTGCATCAAAGTTGGGGAACCAA...GTATCCGAGAGACTGTTTAATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp AAGTCAGATTCCAGCCGGGCTCTTCCTCTGTCCCATGTGATATCCGAAAGGCCCCTTCTTCTGGTTCTGTaGTGCTGGAACTGTCTATGT +
Preference number: 4 (lower is better)
Translates to: KSDSSRALPLSHVISERPLLLVL*CWNCLC
Trigger: ACATAGACAGTTCCAGCATCACAGAACCAGAAGAAG...GGGCCTTTCGGATATCACATGGGACAGAGGAAGAGCCCGGCTGGAATCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp GACAGGTTATTAAACAGTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACACTGGGGTGTAGCCCTTaGGGTCGATCTTGGCCGAAA +
Preference number: 4 (lower is better)
Translates to: DRLLNSLSDTALGIQCLTLGCSP*GRSWPK
Trigger: TTTCGGCCAAGATCGACCGCAAGGGCTACACCCCAG...TGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAATAACCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp CACATAGCTCTGACAACCTGCTTTCCTGAACGCCTCGTTCCTGGGTCCTTTCACATAGCTCTGACAACCTaGTTTCCTGAACGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: HIALTTCFPERLVPGSFHIALTT*FPERLV
Trigger: AACGAGGCGTTCAGGAAAGCAGGTTGTCAGAGCTAT...GTGAAAGGACCCAGGAACGAGGCGTTCAGGAAAGCAGGTTGTCAGAGCTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TACTCCAAAGCCTCAGCTAAAATGCCCTTTCCGCAAGGACGCCTTCTCTGCTTCCAGCTTGGACGTTCCTaGGATATCCACACAGACCTT +
Preference number: 4 (lower is better)
Translates to: YSKASAKMPFPQGRLLCFQLGRS*DIHTDL
Trigger: AAGGTCTGTGTGGATATCCCAGGAACGTCCAAGCTG...GAAGCAGAGAAGGCGTCCTTGCGGAAAGGGCATTTTAGCTGAGGCTTTGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TCCAGCACCACCAATTGGCTGGGAAGACAGGTTATTAAACAGTCTCTCGGATACCACTCCCCACAGTCATaGTGGCTGAAAGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SSTTNWLGRQVIKQSLGYHSPQS*WLKAGV
Trigger: CACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG...GTATCCGAGAGACTGTTTAATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp ATTCAATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCGCACCACCAATTGGCTaGGAAGACAGGTTATTAAAC +
Preference number: 4 (lower is better)
Translates to: IQCLTRTAVQVSQIPAGLAPPIG*EDRLLN
Trigger: GTTTAATAACCTGTCTTCCCAGCCAATTGGTGGTGC...GAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCATTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp AAGTCAGATTCCAGCCGGGCTCTTCCTCTGTCCCATGTGATATCCGAAAGGCCCTGCGCCAGGAATCTCTaGCTTTCAAAGTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KSDSSRALPLSHVISERPCARNL*LSKSSK
Trigger: CTTTGAAGACTTTGAAAGCCAGAGATTCCTGGCGCA...GGGCCTTTCGGATATCACATGGGACAGAGGAAGAGCCCGGCTGGAATCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp GTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACAGCGGTCCAGGTTTCACTTTGCACATTaGGTATCTGGTCTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VSRILHWAFNASQGQRSRFHFAH*VSGLAC
Trigger: ACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAA...CCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp GAACGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAAATGCTGTCACTGTCTTaGATTCTTCATCGTTTAACA +
Preference number: 4 (lower is better)
Translates to: ERLVPGSFHPPDLTVWPQMLSLS*ILHRLT
Trigger: TGTTAAACGATGAAGAATTCAAGACAGTGACAGCAT...TTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp GACAGGTTATTAAACAGTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACAGCACTGGGCATTCAATaGCTCACAAGGACAGCGGTC +
Preference number: 4 (lower is better)
Translates to: DRLLNSLSDTALGIQCLTALGIQ*LTRTAV
Trigger: GACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGC...TGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAATAACCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp TACTCCAAAGCCTCAGCTAAAATGCCCTTTCCGCAAGGACGCCTTCTCTGCTTCTCCAGCACCACCAATTaGCTGGGAAGACAGGTTATT +
Preference number: 4 (lower is better)
Translates to: YSKASAKMPFPQGRLLCFSSTTN*LGRQVI
Trigger: AATAACCTGTCTTCCCAGCCAATTGGTGGTGCTGGA...GAAGCAGAGAAGGCGTCCTTGCGGAAAGGGCATTTTAGCTGAGGCTTTGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
3UTR CAA 72 bp CGTTTAACAGGGAGCCCAGTGTTTTCACTTTGCACATaGGGTATCTGGTCTTGCCTGTCCTACCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: RLTGSPVFSLCT*GIWSCLSYPEP
Trigger: AGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAACACTGGGCTCCCTGTTAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR GCA 90 bp TTGCAGGTCTCTTCTTCTGGTTCTGTGATGCTGGAACTGTCTATGTCTGGCTCTCAGTCTCTCGGATACTaGACTGGGCATTCAATGCCT +
Preference number: 4 (lower is better)
Translates to: LQVSSSGSVMLELSMSGSQSLGY*TGHSMP
Trigger: AGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTG...AGAGCCAGACATAGACAGTTCCAGCATCACAGAACCAGAAGAAGAGACCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp ACCTGCCCTCTGAACCCCCAGTTCTACAATAAACGGGGTGGATTCCAAACGTCATTTCACTTTGCACATTaGGTATCTGGTCTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TCPLNPQFYNKRGGFQTSFHFAH*VSGLAC
Trigger: ACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAA...TGACGTTTGGAATCCACCCCGTTTATTGTAGAACTGGGGGTTCAGAGGGCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CCA 90 bp GACAGGTTATTAAACAGTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACATCTCGGATACTGCACTaGGCATTCAATGCCTCACAA +
Preference number: 4 (lower is better)
Translates to: DRLLNSLSDTALGIQCLTSRILH*AFNASQ
Trigger: TTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGA...TGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAATAACCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR TCA 90 bp GTTATTAAACAGTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACAGCTCTGACCTTCTCTaGCCTTTATTCCTCATTCGT +
Preference number: 4 (lower is better)
Translates to: VIKQSLGYCTGHSMPHKDSSDLL*PLFLIR
Trigger: ACGAATGAGGAATAAAGGTCAGAGAAGGTCAGAGCT...GTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS TCA 90 bp GCCGCAGGTAGGTCTCCGCGGCCGCGTAGTCGCTGGATACGGCGTTaGCGCCCACGCTGCGACCCTCCAACCAGTGGGTGGCCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: AAGRSPRPRSRWIRR*RPRCDPPTSGWPPR
Trigger: GCGGGGCGGCCACCCACTGGTTGGAGGGTCGCAGCGTGGGCGTCAACGCCGTATCCAGCGACTACGCGGCCGCGGAGACCTACCTGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS GCA 90 bp CGCGTTCACTGTAGCTCTGCGTGTAAGCCGTGCTCGAGCCCGCGCTaGGCGACTCGGTCCAGTGCACGTGGGCGCGGCCCCGCGCGCGCA +
Preference number: 5 (lower is better)
Translates to: RVHCSSACKPCSSPR*ATRSSARGRGPARA
Trigger: TGCGCGCGCGGGGCCGCGCCCACGTGCACTGGACCGAGTCGCGCAGCGCGGGCTCGAGCACGGCTTACACGCAGAGCTACAGTGAACGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
ENST00000608009.1
CDS GCA 90 bp CCGCTGCCCGGGGCCCACCGGCTCGCCCGCGAGGCTGGCCACCACTaGCCGTTTCTGCTTTCGGGCGCCTCGGGCCATGAACGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: PLPGAHRLAREAGHH*PFLLSGASGHERLC
Trigger: ACACAGACGTTCATGGCCCGAGGCGCCCGAAAGCAGAAACGGGCAGTGGTGGCCAGCCTCGCGGGCGAGCCGGTGGGCCCCGGGCAGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 90 bp TGCGCACGCCCCCAGAGCGCATGGCGCGCGGCTGGGGACACGGTTTaGACACGCGGAGAGAAGGCACACGGCCCGGGCGCGCCTGCAGAT +
Preference number: 5 (lower is better)
Translates to: CARPQSAWRAAGDTV*TRGEKAHGPGAPAD
Trigger: ATCTGCAGGCGCGCCCGGGCCGTGTGCCTTCTCTCCGCGTGTCCAAACCGTGTCCCCAGCCGCGCGCCATGCGCTCTGGGGGCGTGCGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS CCA 90 bp TCCAGCGCGAAGCTGCGCACGCCCCCAGAGCGCATGGCGCGCGGCTaGGGACACGGTTTGGACACGCGGAGAGAAGGCACACGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: SSAKLRTPPERMARG*GHGLDTRREGTRPG
Trigger: CCCGGGCCGTGTGCCTTCTCTCCGCGTGTCCAAACCGTGTCCCCAGCCGCGCGCCATGCGCTCTGGGGGCGTGCGCAGCTTCGCGCTGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS CCA 90 bp CCCGCGCCAGCTCCAGCGCGAAGCTGCGCACGCCCCCAGAGCGCATaGCGCGCGGCTGGGGACACGGTTTGGACACGCGGAGAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PAPAPARSCARPQSA*RAAGDTVWTRGEKA
Trigger: TGCCTTCTCTCCGCGTGTCCAAACCGTGTCCCCAGCCGCGCGCCATGCGCTCTGGGGGCGTGCGCAGCTTCGCGCTGGAGCTGGCGCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS CCA 90 bp TCGCTGGATACGGCGTTGACGCCCACGCTGCGACCCTCCAACCAGTaGGTGGCCGCCCCGCCGCGCGCCTTCACCTCGAGCGCTCGCACC +
Preference number: 5 (lower is better)
Translates to: SLDTALTPTLRPSNQ*VAAPPRAFTSSART
Trigger: GGTGCGAGCGCTCGAGGTGAAGGCGCGCGGCGGGGCGGCCACCCACTGGTTGGAGGGTCGCAGCGTGGGCGTCAACGCCGTATCCAGCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS GCA 90 bp GGGCCCACCGGCTCGCCCGCGAGGCTGGCCACCACTGCCCGTTTCTaGTTTCGGGCGCCTCGGGCCATGAACGTCTGTGTCTGCACCACG +
Preference number: 5 (lower is better)
Translates to: GPTGSPARLATTARF*FRAPRAMNVCVCTT
Trigger: CGTGGTGCAGACACAGACGTTCATGGCCCGAGGCGCCCGAAAGCAGAAACGGGCAGTGGTGGCCAGCCTCGCGGGCGAGCCGGTGGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 90 bp CAGGCCGCTCCGGCAAGGCCCCCAGCCTCCAGTCCAGCAGGAAGCTaGCGTGGCTGCCCACGCTGGAGGAACGGCTGCCAAAAGGGTGCA +
Preference number: 5 (lower is better)
Translates to: QAAPARPPASSPAGS*RGCPRWRNGCQKGA
Trigger: TGCACCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCACGCCAGCTTCCTGCTGGACTGGAGGCTGGGGGCCTTGCCGGAGCGGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS GCA 90 bp GGCTCACGACCTCCACGCGTTCACTGTAGCTCTGCGTGTAAGCCGTaGTCGAGCCCGCGCTGCGCGACTCGGTCCAGTGCACGTGGGCGC +
Preference number: 5 (lower is better)
Translates to: GSRPPRVHCSSACKP*SSPRCATRSSARGR
Trigger: GCGCCCACGTGCACTGGACCGAGTCGCGCAGCGCGGGCTCGAGCACGGCTTACACGCAGAGCTACAGTGAACGCGTGGAGGTCGTGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
ENST00000608009.1
CDS CCA 90 bp CGCTCCGGCAAGGCCCCCAGCCTCCAGTCCAGCAGGAAGCTGGCGTaGCTGCCCACGCTGGAGGAACGGCTGCCAAAAGGGTGCAAGGGA +
Preference number: 5 (lower is better)
Translates to: RSGKAPSLQSSRKLA*LPTLEERLPKGCKG
Trigger: TCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCACGCCAGCTTCCTGCTGGACTGGAGGCTGGGGGCCTTGCCGGAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS TCA 90 bp GGCTGGCCACCACTGCCCGTTTCTGCTTTCGGGCGCCTCGGGCCATaGACGTCTGTGTCTGCACCACGGCTGCCCGAGGCAGCACAGGAC +
Preference number: 5 (lower is better)
Translates to: GWPPLPVSAFGRLGP*TSVSAPRLPEAAQD
Trigger: GTCCTGTGCTGCCTCGGGCAGCCGTGGTGCAGACACAGACGTTCATGGCCCGAGGCGCCCGAAAGCAGAAACGGGCAGTGGTGGCCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS GCA 90 bp CCGGCAAGGCCCCCAGCCTCCAGTCCAGCAGGAAGCTGGCGTGGCTaGCCACGCTGGAGGAACGGCTGCCAAAAGGGTGCAAGGGAATGG +
Preference number: 5 (lower is better)
Translates to: PARPPASSPAGSWRG*PRWRNGCQKGAREW
Trigger: CCATTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCACGCCAGCTTCCTGCTGGACTGGAGGCTGGGGGCCTTGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 90 bp GGTGTTGGAGCAGGGGTCCTCCATCCGTACCTGGCGCCAGGAGCGTaGCGCGGTGGCTCACGACCTCCACGCGTTCACTGTAGCTCTGCG +
Preference number: 5 (lower is better)
Translates to: GVGAGVLHPYLAPGA*RGGSRPPRVHCSSA
Trigger: CGCAGAGCTACAGTGAACGCGTGGAGGTCGTGAGCCACCGCGCCACGCTCCTGGCGCCAGGTACGGATGGAGGACCCCTGCTCCAACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000593560.6
CDS CCA 90 bp GGAGGCACACAACTGGTGTTGGAGCAGGGGTCCTCCATCCGTACCTaGCGCCAGGAGCGTGGCGCGGTGGCTCACGACCTCCACGCGTTC +
Preference number: 5 (lower is better)
Translates to: GGTQLVLEQGSSIRT*RQERGAVAHDLHAF
Trigger: GAACGCGTGGAGGTCGTGAGCCACCGCGCCACGCTCCTGGCGCCAGGTACGGATGGAGGACCCCTGCTCCAACACCAGTTGTGTGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000593560.6
CDS CCA 90 bp ACGGAGGTACCGCCGTCCAGGTGGTGGGAGGCACACAACTGGTGTTaGAGCAGGGGTCCTCCATCCGTACCTGGCGCCAGGAGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: TEVPPSRWWEAHNWC*SRGPPSVPGARSVA
Trigger: CGCCACGCTCCTGGCGCCAGGTACGGATGGAGGACCCCTGCTCCAACACCAGTTGTGTGCCTCCCACCACCTGGACGGCGGTACCTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000593560.6
CDS CCA 90 bp GGGCTGACGGAGGTACCGCCGTCCAGGTGGTGGGAGGCACACAACTaGTGTTGGAGCAGGGGTCCTCCATCCGTACCTGGCGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: GLTEVPPSRWWEAHN*CWSRGPPSVPGARS
Trigger: GCTCCTGGCGCCAGGTACGGATGGAGGACCCCTGCTCCAACACCAGTTGTGTGCCTCCCACCACCTGGACGGCGGTACCTCCGTCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000593560.6
CDS CCA 90 bp GGTTGCGCTGGGGTCCCAGGGCTGACGGAGGTACCGCCGTCCAGGTaGTGGGAGGCACACAACTGGTGTTGGAGCAGGGGTCCTCCATCC +
Preference number: 5 (lower is better)
Translates to: GCAGVPGLTEVPPSR*WEAHNWCWSRGPPS
Trigger: GGATGGAGGACCCCTGCTCCAACACCAGTTGTGTGCCTCCCACCACCTGGACGGCGGTACCTCCGTCAGCCCTGGGACCCCAGCGCAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000593560.6
CDS GCA 90 bp CCGCCGCTAAACACGGGCTCGACGCCCGCGGTCGCGCCGTCCAACTaGACCGAGAACGCTTTCACCTTGTCGAATAGCATCGCGTCCGGG +
Preference number: 5 (lower is better)
Translates to: PPLNTGSTPAVAPSN*TENAFTLSNSIASG
Trigger: CCCGGACGCGATGCTATTCGACAAGGTGAAAGCGTTCTCGGTGCAGTTGGACGGCGCGACCGCGGGCGTCGAGCCCGTGTTTAGCGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
CDS GCA 90 bp CTTTCGGGCGCCTCGGGCCATGAACGTCTGTGTCTGCACCACGGCTaGCCGAGGCAGCACAGGACGTGTGGAGCCGTTGTCGATCTCGGC +
Preference number: 5 (lower is better)
Translates to: LSGASGHERLCLHHG*PRQHRTCGAVVDLG
Trigger: GCCGAGATCGACAACGGCTCCACACGTCCTGTGCTGCCTCGGGCAGCCGTGGTGCAGACACAGACGTTCATGGCCCGAGGCGCCCGAAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS GCA 90 bp GCCCGTTTCTGCTTTCGGGCGCCTCGGGCCATGAACGTCTGTGTCTaGACCACGGCTGCCCGAGGCAGCACAGGACGTGTGGAGCCGTTG +
Preference number: 5 (lower is better)
Translates to: ARFCFRAPRAMNVCV*TTAARGSTGRVEPL
Trigger: CAACGGCTCCACACGTCCTGTGCTGCCTCGGGCAGCCGTGGTGCAGACACAGACGTTCATGGCCCGAGGCGCCCGAAAGCAGAAACGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 90 bp TGCGCTGGGGTCCCAGGGCTGACGGAGGTACCGCCGTCCAGGTGGTaGGAGGCACACAACTGGTGTTGGAGCAGGGGTCCTCCATCCGTA +
Preference number: 5 (lower is better)
Translates to: CAGVPGLTEVPPSRW*EAHNWCWSRGPPSV
Trigger: TACGGATGGAGGACCCCTGCTCCAACACCAGTTGTGTGCCTCCCACCACCTGGACGGCGGTACCTCCGTCAGCCCTGGGACCCCAGCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000593560.6
CDS TCA 90 bp AGGGCAACCCTGCACCCCAGAGGACTTACGGGGGCAGCTGGAAGCTaGACAGGAACTCATGGCGCCCAGGAGGCAGCGTCGTGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: RATLHPRGLTGAAGS*TGTHGAQEAASWSP
Trigger: GGGAGACCACGACGCTGCCTCCTGGGCGCCATGAGTTCCTGTTCAGCTTCCAGCTGCCCCCGTAAGTCCTCTGGGGTGCAGGGTTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000596105.2
CDS GCA 90 bp CCTTCAAGGCTCATGTCGGGGTCCTGCGGAAGCGGGAAGGGGCTCTaGCCCAAGGCTGCCTCCTCAGTGTCGGCTACCACCTCCGAGTAC +
Preference number: 5 (lower is better)
Translates to: PSRLMSGSCGSGKGL*PKAASSVSATTSEY
Trigger: GTACTCGGAGGTGGTAGCCGACACTGAGGAGGCAGCCTTGGGGCAGAGCCCCTTCCCGCTTCCGCAGGACCCCGACATGAGCCTTGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 90 bp CGAATAGCATCGCGTCCGGGGTGCGAACCCACGACAGGCGGAACCTaGCCTCGAACTCGCGAACCGGCAGCTCAAGATGCCGACGCTGCA +
Preference number: 5 (lower is better)
Translates to: RIASRPGCEPTTGGT*PRTREPAAQDADAA
Trigger: TGCAGCGTCGGCATCTTGAGCTGCCGGTTCGCGAGTTCGAGGCCAGGTTCCGCCTGTCGTGGGTTCGCACCCCGGACGCGATGCTATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
CDS CCA 90 bp CCCCCAGCCTCCAGTCCAGCAGGAAGCTGGCGTGGCTGCCCACGCTaGAGGAACGGCTGCCAAAAGGGTGCAAGGGAATGGTGCCGATCA +
Preference number: 5 (lower is better)
Translates to: PPASSPAGSWRGCPR*RNGCQKGAREWCRS
Trigger: TGATCGGCACCATTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCACGCCAGCTTCCTGCTGGACTGGAGGCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 90 bp ATCCACCTCTCCGTGTATCCACCCACCCTCTGCATGCAAGCAGGGTaGGAGCTTACCCTCAGGCCGCTCCGGCAAGGCCCCCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: IHLSVYPPTLCMQAG*ELTLRPLRQGPQPP
Trigger: TGGAGGCTGGGGGCCTTGCCGGAGCGGCCTGAGGGTAAGCTCCCACCCTGCTTGCATGCAGAGGGTGGGTGGATACACGGAGAGGTGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS-3UTR CAA 90 bp CCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTCCACACGCGCGGCGCTaGACAGCTCCAGCAGCACCC +
Preference number: 5 (lower is better)
Translates to: PWVLGGAPRKSKPAPGISPHARR*TAPAAP
Trigger: GGGTGCTGCTGGAGCTGTCAAGCGCCGCGCGTGTGG...AGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS GCA 90 bp AACCTGGCCTCGAACTCGCGAACCGGCAGCTCAAGATGCCGACGCTaGAGCCTCAGAACGCAAAATCGCCGTCAACGCGCAGGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: NLASNSRTGSSRCRR*SLRTQNRRQRAGAL
Trigger: GAGCGCGCCTGCGCGTTGACGGCGATTTTGCGTTCTGAGGCTGCAGCGTCGGCATCTTGAGCTGCCGGTTCGCGAGTTCGAGGCCAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
CDS GCA 90 bp AAGCTGGCGTGGCTGCCCACGCTGGAGGAACGGCTGCCAAAAGGGTaGAAGGGAATGGTGCCGATCACCAGTGGCAGCTCCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KLAWLPTLEERLPKG*KGMVPITSGSSSSS
Trigger: GCTGCTGCTGGAGCTGCCACTGGTGATCGGCACCATTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCACGCCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 90 bp GTCCACAGGCTCGATGACAGTGAACACCTTCCTTGCCCGGCGTGCTaGGACCCAGGGCCGGTGCAGGGTGGCCTTGATACAGTAGCGGAC +
Preference number: 5 (lower is better)
Translates to: VHRLDDSEHLPCPAC*DPGPVQGGLDTVAD
Trigger: GTCCGCTACTGTATCAAGGCCACCCTGCACCGGCCCTGGGTCCCAGCACGCCGGGCAAGGAAGGTGTTCACTGTCATCGAGCCTGTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000595712.6
ENST00000608009.1
ENST00000683912.1
CDS-3UTR CAA 90 bp GAACGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAATTCCCGAGCCCCCGCTaGAGGTGCCAGCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: ERLVPGSFHPPDLTVWPQFPSPR*RCQQGW
Trigger: CCAGCCCTGCTGGCACCTCAAGCGGGGGCTCGGGAA...TTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS TCA 90 bp TCCTTGCCCGGCGTGCTGGGACCCAGGGCCGGTGCAGGGTGGCCTTaGTACAGTAGCGGACACTACCGTGTTTGCCCTCGAAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: SLPGVLGPRAGAGWP*YSSGHYRVCPRRMS
Trigger: TGACATCCTTCGAGGGCAAACACGGTAGTGTCCGCTACTGTATCAAGGCCACCCTGCACCGGCCCTGGGTCCCAGCACGCCGGGCAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000595712.6
ENST00000608009.1
ENST00000683912.1
CDS GCA 90 bp GACAGGCGGAACCTGGCCTCGAACTCGCGAACCGGCAGCTCAAGATaGCGACGCTGCAGCCTCAGAACGCAAAATCGCCGTCAACGCGCA +
Preference number: 5 (lower is better)
Translates to: DRRNLASNSRTGSSR*RRCSLRTQNRRQRA
Trigger: TGCGCGTTGACGGCGATTTTGCGTTCTGAGGCTGCAGCGTCGGCATCTTGAGCTGCCGGTTCGCGAGTTCGAGGCCAGGTTCCGCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
CDS GCA 90 bp GCACCGAGAACGCTTTCACCTTGTCGAATAGCATCGCGTCCGGGGTaGGAACCCACGACAGGCGGAACCTGGCCTCGAACTCGCGAACCG +
Preference number: 5 (lower is better)
Translates to: APRTLSPCRIASRPG*EPTTGGTWPRTREP
Trigger: CGGTTCGCGAGTTCGAGGCCAGGTTCCGCCTGTCGTGGGTTCGCACCCCGGACGCGATGCTATTCGACAAGGTGAAAGCGTTCTCGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
CDS GCA 90 bp TGGCGTGTTGATGTCCACAGGCTCGATGACAGTGAACACCTTCCTTaGCCGGCGTGCTGGGACCCAGGGCCGGTGCAGGGTGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: WRVDVHRLDDSEHLP*PACWDPGPVQGGLD
Trigger: ATCAAGGCCACCCTGCACCGGCCCTGGGTCCCAGCACGCCGGGCAAGGAAGGTGTTCACTGTCATCGAGCCTGTGGACATCAACACGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000595712.6
ENST00000608009.1
ENST00000683912.1
CDS GCA 90 bp AGTCCAGCAGGAAGCTGGCGTGGCTGCCCACGCTGGAGGAACGGCTaGCAAAAGGGTGCAAGGGAATGGTGCCGATCACCAGTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: SPAGSWRGCPRWRNG*QKGAREWCRSPVAA
Trigger: AGCTGCCACTGGTGATCGGCACCATTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCACGCCAGCTTCCTGCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS GCA 90 bp CGTCCCAACCCAGTCCGGTCCGCCTGCTACCTGGGGTGTAGCCCTTaGGGTCGATCTTGGCCGAAAGGGAGACTAGGCCACGGTTACAGT +
Preference number: 5 (lower is better)
Translates to: RPNPVRSACYLGCSP*GRSWPKGRLGHGYS
Trigger: ACTGTAACCGTGGCCTAGTCTCCCTTTCGGCCAAGATCGACCGCAAGGGCTACACCCCAGGTAGCAGGCGGACCGGACTGGGTTGGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CCA 90 bp GGCTGCCCACGCTGGAGGAACGGCTGCCAAAAGGGTGCAAGGGAATaGTGCCGATCACCAGTGGCAGCTCCAGCAGCAGCTTGGACGTTC +
Preference number: 5 (lower is better)
Translates to: GCPRWRNGCQKGARE*CRSPVAAPAAAWTF
Trigger: GAACGTCCAAGCTGCTGCTGGAGCTGCCACTGGTGATCGGCACCATTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 90 bp GTCCGGTCCGCCTGCTACCTGGGGTGTAGCCCTTGCGGTCGATCTTaGCCGAAAGGGAGACTAGGCCACGGTTACAGTACCAGGATCGGG +
Preference number: 5 (lower is better)
Translates to: VRSACYLGCSPCGRS*PKGRLGHGYSTRIG
Trigger: CCCGATCCTGGTACTGTAACCGTGGCCTAGTCTCCCTTTCGGCCAAGATCGACCGCAAGGGCTACACCCCAGGTAGCAGGCGGACCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS GCA 90 bp TGCCCACGCTGGAGGAACGGCTGCCAAAAGGGTGCAAGGGAATGGTaGCGATCACCAGTGGCAGCTCCAGCAGCAGCTTGGACGTTCCTG +
Preference number: 5 (lower is better)
Translates to: CPRWRNGCQKGAREW*RSPVAAPAAAWTFL
Trigger: CAGGAACGTCCAAGCTGCTGCTGGAGCTGCCACTGGTGATCGGCACCATTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 90 bp AGGCAGGCCCCTTCCTACAATACTCCCAACCTACCTCCCCAAGGGTaGCCACTCACCAGCAGGGCTGGCGTGTTGATGTCCACAGGCTCG +
Preference number: 5 (lower is better)
Translates to: RQAPSYNTPNLPPQG*PLTSRAGVLMSTGS
Trigger: CGAGCCTGTGGACATCAACACGCCAGCCCTGCTGGTGAGTGGCCACCCTTGGGGAGGTAGGTTGGGAGTATTGTAGGAAGGGGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CCA 90 bp CCTCCCTCCCTGCCAGGGCCCACCTATGACCTCCATCTTATTGGTTaGTGTCGCCCAGCAGCCAGGCAGGCCCCTTCCTACAATACTCCC +
Preference number: 5 (lower is better)
Translates to: PPSLPGPTYDLHLIG*CRPAARQAPSYNTP
Trigger: GGGAGTATTGTAGGAAGGGGCCTGCCTGGCTGCTGGGCGACACCAACCAATAAGATGGAGGTCATAGGTGGGCCCTGGCAGGGAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS-3UTR CAA 90 bp ATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCTTCCTCGGGGAGGTCAGCCCTaGGTCCAGCCACTCCCCACA +
Preference number: 5 (lower is better)
Translates to: MPHKDSGPGKSDSSRALPRGGQP*VQPLPT
Trigger: TGTGGGGAGTGGCTGGACCAAGGGCTGACCTCCCCG...AGGAAGAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp TCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCCGGGGAGGTCAGCCCTaGGTCCAGCCACTCCCCACA +
Preference number: 5 (lower is better)
Translates to: SSHSPQSWWLKAGVQPCSRGGQP*VQPLPT
Trigger: TGTGGGGAGTGGCTGGACCAAGGGCTGACCTCCCCG...GGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp CACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTCGAGGTCGCTGGATACGGCGTaGACGCCCACGCTGCGACCC +
Preference number: 5 (lower is better)
Translates to: HSPQSWWLKAGVQPCSSRSLDTA*TPTLRP
Trigger: GGGTCGCAGCGTGGGCGTCAACGCCGTATCCAGCGA...CCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS GCA 90 bp GTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTCGAGGGGTCCCTGTaGCGTTCAGCAAGTCATGCAGCGCGGCCTCATGTCCCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: VAESWCATLFLEGSL*RSASHAARPHVPQE
Trigger: CTCTTGGGGGACATGAGGCCGCGCTGCATGACTTGCTGAACGGCACAGGGACCCCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 90 bp CAGCCCTTGGTCCAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTaGTGTGCAACCTTGTTCCTCGAGGGGTCCCTGTGCCGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: QPLVQPLPTVMVAES*CATLFLEGSLCRSA
Trigger: TGCTGAACGGCACAGGGACCCCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTGGACCAAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000595712.6
ENST00000683912.1
CDS-3UTR CAA 90 bp CACCCAGGCAGCTCTGATGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCACGGACACTACCGTGTTaGCCCTCGAAGGATGTCACC +
Preference number: 5 (lower is better)
Translates to: HPGSSDAPGYLEELPGSPRTLPC*PSKDVT
Trigger: GGTGACATCCTTCGAGGGCAAACACGGTAGTGTCCG...TGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATCAGAGCTGCCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp TGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCGGACGTGTGGAGCCGTaGTCGATCTCGGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: CPWVLGGAPRKSKPAPGIGRVEP*SISAKT
Trigger: TGTCTTTGCCGAGATCGACAACGGCTCCACACGTCC...GATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp CGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACTCGATGCCCCTGGGTACTaGGAGGAGCTCCCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: RLVPGSFHPPDLTVWPQLDAPGY*EELPGS
Trigger: ACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATC...GAGTTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp CCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTGATGCCCCTGGGTACTaGGAGGAGCTCCCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: PWVLGGAPRKSKPAPGISDAPGY*EELPGS
Trigger: ACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCATC...AGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS TCA 90 bp GTGAATGTAGGCACTGTCCCCCAGGGCCAGCAGGATGCCCTACCTTaGGTGCGTAGTCCACGTGTAGAACGCGGCAGTGCAGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: VNVGTVPQGQQDALP*VRSPRVERGSAGWK
Trigger: CTTCCATCCTGCACTGCCGCGTTCTACACGTGGACTACGCACTCAAGGTAGGGCATCCTGCTGGCCCTGGGGGACAGTGCCTACATTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS GCA 90 bp TGCAACCTTGTTCCTCGAGGGGTCCCTGTGCCGTTCAGCAAGTCATaGAGCGCGGCCTCATGTCCCCCAAGAGTGGGTTTGGATCCTCCT +
Preference number: 5 (lower is better)
Translates to: CNLVPRGVPVPFSKS*SAASCPPRVGLDPP
Trigger: AGGAGGATCCAAACCCACTCTTGGGGGACATGAGGCCGCGCTGCATGACTTGCTGAACGGCACAGGGACCCCTCGAGGAACAAGGTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000595712.6
ENST00000683912.1
CDS-3UTR CAA 90 bp GTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACAGCGGTCCAGGGCTGGGACTCTGCAGTaGGGAGCTTGTCCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: VSRILHWAFNASQGQRSRAGTLQ*GACPAA
Trigger: GGCAGCTGGACAAGCTCCCAACTGCAGAGTCCCAGC...CCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp ATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCTTCCTGCTGGGACTCTGCAGTaGGGAGCTTGTCCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: MPHKDSGPGKSDSSRALPAGTLQ*GACPAA
Trigger: GGCAGCTGGACAAGCTCCCAACTGCAGAGTCCCAGC...AGGAAGAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS CCA 90 bp GGAACGGCTGCCAAAAGGGTGCAAGGGAATGGTGCCGATCACCAGTaGCAGCTCCAGCAGCAGCTTGGACGTTCCTGGGATATCCACACA +
Preference number: 5 (lower is better)
Translates to: GTAAKRVQGNGADHQ*QLQQQLGRSWDIHT
Trigger: TGTGTGGATATCCCAGGAACGTCCAAGCTGCTGCTGGAGCTGCCACTGGTGATCGGCACCATTCCCTTGCACCCTTTTGGCAGCCGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 90 bp AGAAGGAGACACAGACACTCCGGGGGCCTCCCAGGGGGAGAGTCTTaGGGCTCAGAGGTGCCCAGATATCCAGTATTGGAGGTACCAATC +
Preference number: 5 (lower is better)
Translates to: RRRHRHSGGLPGGES*GSEVPRYPVLEVPI
Trigger: GATTGGTACCTCCAATACTGGATATCTGGGCACCTCTGAGCCCCAAGACTCTCCCCCTGGGAGGCCCCCGGAGTGTCTGTGTCTCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CCA 90 bp TACTCCCAACCTACCTCCCCAAGGGTGGCCACTCACCAGCAGGGCTaGCGTGTTGATGTCCACAGGCTCGATGACAGTGAACACCTTCCT +
Preference number: 5 (lower is better)
Translates to: YSQPTSPRVATHQQG*RVDVHRLDDSEHLP
Trigger: AGGAAGGTGTTCACTGTCATCGAGCCTGTGGACATCAACACGCCAGCCCTGCTGGTGAGTGGCCACCCTTGGGGAGGTAGGTTGGGAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CCA 90 bp GGTGCCGATCACCAGTGGCAGCTCCAGCAGCAGCTTGGACGTTCCTaGGATATCCACACAGACCTGGAGGAAGGAACCATAAGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: GADHQWQLQQQLGRS*DIHTDLEEGTIREG
Trigger: ACCCTCCCTTATGGTTCCTTCCTCCAGGTCTGTGTGGATATCCCAGGAACGTCCAAGCTGCTGCTGGAGCTGCCACTGGTGATCGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS-3UTR CAA 90 bp ATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCTTCCTCCCTTGCGGTCGATCTaGGCCGAAAGGGAGACTAGG +
Preference number: 5 (lower is better)
Translates to: MPHKDSGPGKSDSSRALPPLRSI*AERETR
Trigger: CCTAGTCTCCCTTTCGGCCAAGATCGACCGCAAGGG...AGGAAGAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS GCA 90 bp AGAGAGGGCTTCAAGACACTTGCCCAGAGTCACACGGCAAATGGGTaGAGATCCCAGTGGATTCCACACGCATTCCCACACCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: REGFKTLAQSHTANG*RSQWIPHAFPHLPP
Trigger: GGGAGGCAGGTGTGGGAATGCGTGTGGAATCCACTGGGATCTGCACCCATTTGCCGTGTGACTCTGGGCAAGTGTCTTGAAGCCCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CCA 90 bp ACACTACCGTGTTTGCCCTCGAAGGATGTCACCAGGGTCCTAGGGTaGAGGGACGGGACTTCAGGGGACAAGATACAGAGACAAGCAGGC +
Preference number: 5 (lower is better)
Translates to: TLPCLPSKDVTRVLG*RDGTSGDKIQRQAG
Trigger: GCCTGCTTGTCTCTGTATCTTGTCCCCTGAAGTCCCGTCCCTCCACCCTAGGACCCTGGTGACATCCTTCGAGGGCAAACACGGTAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CCA 90 bp GCTCAGAGAGGGCTTCAAGACACTTGCCCAGAGTCACACGGCAAATaGGTGCAGATCCCAGTGGATTCCACACGCATTCCCACACCTGCC +
Preference number: 5 (lower is better)
Translates to: AQRGLQDTCPESHGK*VQIPVDSTRIPTPA
Trigger: GGCAGGTGTGGGAATGCGTGTGGAATCCACTGGGATCTGCACCCATTTGCCGTGTGACTCTGGGCAAGTGTCTTGAAGCCCTCTCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CCA 90 bp GCAAGGGAATGGTGCCGATCACCAGTGGCAGCTCCAGCAGCAGCTTaGACGTTCCTGGGATATCCACACAGACCTGGAGGAAGGAACCAT +
Preference number: 5 (lower is better)
Translates to: AREWCRSPVAAPAAA*TFLGYPHRPGGRNH
Trigger: ATGGTTCCTTCCTCCAGGTCTGTGTGGATATCCCAGGAACGTCCAAGCTGCTGCTGGAGCTGCCACTGGTGATCGGCACCATTCCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS-3UTR CAA 90 bp CGCCTCGTTCCTGGGTCCTTTCACCCACCAGACCTCACTGTGTGGCCTCAACTCGAGAACGCTTTCACCTaGTCGAATAGCATCGCGTCC +
Preference number: 5 (lower is better)
Translates to: RLVPGSFHPPDLTVWPQLENAFT*SNSIAS
Trigger: GGACGCGATGCTATTCGACAAGGTGAAAGCGTTCTC...GAGTTGAGGCCACACAGTGAGGTCTGGTGGGTGAAAGGACCCAGGAACGAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222250.5
CDS-3UTR CAA 90 bp CACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTTGTTCCTCGAGGCGGACACTACCGTGTTaGCCCTCGAAGGATGTCACC +
Preference number: 5 (lower is better)
Translates to: HSPQSWWLKAGVQPCSSRRTLPC*PSKDVT
Trigger: GGTGACATCCTTCGAGGGCAAACACGGTAGTGTCCG...CCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp GTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACAGCGGTCCAGGGCGGTAGCGGAACTCTaGGATGTAGGCGAAGAACGG +
Preference number: 5 (lower is better)
Translates to: VSRILHWAFNASQGQRSRAVAEL*DVGEER
Trigger: CCGTTCTTCGCCTACATCCAAGAGTTCCGCTACCGC...CCTGGACCGCTGTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp TGGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTGCCCCTGCCACCCACAGACTCCCCCCAAGAGTGGGTTaGGATCCTCCTCAGAGTACA +
Preference number: 5 (lower is better)
Translates to: WLSKSSKAGAAAPATHRLPPRVG*DPPQST
Trigger: TGTACTCTGAGGAGGATCCAAACCCACTCTTGGGGG...GAGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp CTGGCTTTCAAAGTCTTCAAAGGCTGGAGCGGCTGCCCCTGCCACCCACAGACTCTTGGTTCCCCAACTTaGATGCAGTCGGGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LAFKVFKGWSGCPCHPQTLGSPT*MQSGRS
Trigger: TGACCTCCCCGACTGCATCAAAGTTGGGGAACCAAG...AGTCTGTGGGTGGCAGGGGCAGCCGCTCCAGCCTTTGAAGACTTTGAAAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp TGCCCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTGGACTCTCACAGTaGCAGGTCTCTTCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: CPWVLGGAPRKSKPAPGISGLSQ*QVSSSG
Trigger: ACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGA...GATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS CCA 90 bp GGTGCCTGCTGCACCCCTTTCCTGATTCAAGTCCCGCTTAGCTGGTaGCTCTGGGCAAATGACAACCTCTTGGAGCCTCAGTTTCCACCT +
Preference number: 5 (lower is better)
Translates to: GACCTPFLIQVPLSW*LWANDNLLEPQFPP
Trigger: AGGTGGAAACTGAGGCTCCAAGAGGTTGTCATTTGCCCAGAGCCACCAGCTAAGCGGGACTTGAATCAGGAAAGGGGTGCAGCAGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600788.6
CDS-3UTR CAA 90 bp AAGTCAGATTCCAGCCGGGCTCTTCCTCTGTCCCATGTGATATCCGAAAGGCCCGGACGTGTGGAGCCGTaGTCGATCTCGGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: KSDSSRALPLSHVISERPGRVEP*SISAKT
Trigger: TGTCTTTGCCGAGATCGACAACGGCTCCACACGTCC...GGGCCTTTCGGATATCACATGGGACAGAGGAAGAGCCCGGCTGGAATCTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp ATGCCTCACAAGGACAGCGGTCCAGGTAAGTCAGATTCCAGCCGGGCTCTTCCTCCCCCAAGAGTGGGTTaGGATCCTCCTCAGAGTACA +
Preference number: 5 (lower is better)
Translates to: MPHKDSGPGKSDSSRALPPPRVG*DPPQST
Trigger: TGTACTCTGAGGAGGATCCAAACCCACTCTTGGGGG...AGGAAGAGCCCGGCTGGAATCTGACTTACCTGGACCGCTGTCCTTGTGAGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS CCA 90 bp ACTGGTGCCTGCTGCACCCCTTTCCTGATTCAAGTCCCGCTTAGCTaGTGGCTCTGGGCAAATGACAACCTCTTGGAGCCTCAGTTTCCA +
Preference number: 5 (lower is better)
Translates to: TGACCTPFLIQVPLS*WLWANDNLLEPQFP
Trigger: TGGAAACTGAGGCTCCAAGAGGTTGTCATTTGCCCAGAGCCACCAGCTAAGCGGGACTTGAATCAGGAAAGGGGTGCAGCAGGCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600788.6
CDS-3UTR CAA 90 bp ACCTGCCCTCTGAACCCCCAGTTCTACAATAAACGGGGTGGATTCCAAACGTCACCCTTGCGGTCGATCTaGGCCGAAAGGGAGACTAGG +
Preference number: 5 (lower is better)
Translates to: TCPLNPQFYNKRGGFQTSPLRSI*AERETR
Trigger: CCTAGTCTCCCTTTCGGCCAAGATCGACCGCAAGGG...TGACGTTTGGAATCCACCCCGTTTATTGTAGAACTGGGGGTTCAGAGGGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp ACAGGGAGCCCAGTGTTTTCACTTTGCACATTGGGTATCTGGTCTTGCCTGTCCGCGGTAGCGGAACTCTaGGATGTAGGCGAAGAACGG +
Preference number: 5 (lower is better)
Translates to: TGSPVFSLCTLGIWSCLSAVAEL*DVGEER
Trigger: CCGTTCTTCGCCTACATCCAAGAGTTCCGCTACCGC...GGACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAACACTGGGCTCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS TCA 90 bp CACTTGGTAAGCCCTAGCTCTGGTCTATTTCACAGAAGAGGCATCTaGGGCTCAGAGAGGGCTTCAAGACACTTGCCCAGAGTCACACGG +
Preference number: 5 (lower is better)
Translates to: HLVSPSSGLFHRRGI*GSERASRHLPRVTR
Trigger: CCGTGTGACTCTGGGCAAGTGTCTTGAAGCCCTCTCTGAGCCTCAGATGCCTCTTCTGTGAAATAGACCAGAGCTAGGGCTTACCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS-3UTR CAA 90 bp TTGGGTATCTGGTCTTGCCTGTCCTACCCTGAACCTGGGTTCCCTGGGCCATGTCCCAGTGTTTTCACTTaGCACATTGGGTATCTGGTC +
Preference number: 5 (lower is better)
Translates to: LGIWSCLSYPEPGFPGPCPSVFT*HIGYLV
Trigger: GACCAGATACCCAATGTGCAAAGTGAAAACACTGGG...ACATGGCCCAGGGAACCCAGGTTCAGGGTAGGACAGGCAAGACCAGATACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp ACAGGGAGCCCAGTGTTTTCACTTTGCACATTGGGTATCTGGTCTTGCCTGTCCTCTGGACTCTCACAGTaGCAGGTCTCTTCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: TGSPVFSLCTLGIWSCLSSGLSQ*QVSSSG
Trigger: ACCAGAAGAAGAGACCTGCAACTGTGAGAGTCCAGA...GGACAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAACACTGGGCTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp CCCTGGGTACTTGGAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTAATGCTGTCACTGTCTaGAATTCTTCATCGTTTAAC +
Preference number: 5 (lower is better)
Translates to: PWVLGGAPRKSKPAPGISNAVTV*NSSSFN
Trigger: GTTAAACGATGAAGAATTCAAGACAGTGACAGCATT...AGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTCCAAGTACCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp TACTCCAAAGCCTCAGCTAAAATGCCCTTTCCGCAAGGACGCCTTCTCTGCTTCTTTTCACTTTGCACATaGGGTATCTGGTCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: YSKASAKMPFPQGRLLCFFSLCT*GIWSCL
Trigger: CAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAA...GAAGCAGAGAAGGCGTCCTTGCGGAAAGGGCATTTTAGCTGAGGCTTTGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp GAGGAGCTCCCAGGAAGTCCAAGCCTGCGCCAGGAATCTCTGGCTTTCAAAGTCAATGCTGTCACTGTCTaGAATTCTTCATCGTTTAAC +
Preference number: 5 (lower is better)
Translates to: EELPGSPSLRQESLAFKVNAVTV*NSSSFN
Trigger: GTTAAACGATGAAGAATTCAAGACAGTGACAGCATT...GACTTTGAAAGCCAGAGATTCCTGGCGCAGGCTTGGACTTCCTGGGAGCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp GACAGGTTATTAAACAGTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACACCCAGTGTTTTCACTTaGCACATTGGGTATCTGGTC +
Preference number: 5 (lower is better)
Translates to: DRLLNSLSDTALGIQCLTPSVFT*HIGYLV
Trigger: GACCAGATACCCAATGTGCAAAGTGAAAACACTGGG...TGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAATAACCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS-3UTR CAA 90 bp GTTATTAAACAGTCTCTCGGATACTGCACTGGGCATTCAATGCCTCACAAGGACTTTTCACTTTGCACATaGGGTATCTGGTCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: VIKQSLGYCTGHSMPHKDFSLCT*GIWSCL
Trigger: CAGGCAAGACCAGATACCCAATGTGCAAAGTGAAAA...GTCCTTGTGAGGCATTGAATGCCCAGTGCAGTATCCGAGAGACTGTTTAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222250.5
ENST00000379656.7
CDS GCA 72 bp GCCGTGCTCGAGCCCGCGCTGCGCGACTCGGTCCAGTaGACGTGGGCGCGGCCCCGCGCGCGCAGCCTCAGA +
Preference number: 6 (lower is better)
Translates to: AVLEPALRDSVQ*TWARPRARSLR
Trigger: TCTGAGGCTGCGCGCGCGGGGCCGCGCCCACGTGCACTGGACCGAGTCGCGCAGCGCGGGCTCGAGCACGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608009.1
CDS CCA 72 bp CCCGCTGCCCGGGGCCCACCGGCTCGCCCGCGAGGCTaGCCACCACTGCCCGTTTCTGCTTTCGGGCGCCTC +
Preference number: 6 (lower is better)
Translates to: PAARGPPARPRG*PPLPVSAFGRL
Trigger: GAGGCGCCCGAAAGCAGAAACGGGCAGTGGTGGCCAGCCTCGCGGGCGAGCCGGTGGGCCCCGGGCAGCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 72 bp CCCCAGAGCGCATGGCGCGCGGCTGGGGACACGGTTTaGACACGCGGAGAGAAGGCACACGGCCCGGGCGCG +
Preference number: 6 (lower is better)
Translates to: PQSAWRAAGDTV*TRGEKAHGPGA
Trigger: CGCGCCCGGGCCGTGTGCCTTCTCTCCGCGTGTCCAAACCGTGTCCCCAGCCGCGCGCCATGCGCTCTGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS CAA 72 bp CCCCCAGAGCGCATGGCGCGCGGCTGGGGACACGGTTaGGACACGCGGAGAGAAGGCACACGGCCCGGGCGC +
Preference number: 6 (lower is better)
Translates to: PPERMARGWGHG*DTRREGTRPGR
Trigger: GCGCCCGGGCCGTGTGCCTTCTCTCCGCGTGTCCAAACCGTGTCCCCAGCCGCGCGCCATGCGCTCTGGGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS CAA 90 bp CTGCGCACGCCCCCAGAGCGCATGGCGCGCGGCTGGGGACACGGTTaGGACACGCGGAGAGAAGGCACACGGCCCGGGCGCGCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: LRTPPERMARGWGHG*DTRREGTRPGRACR
Trigger: TCTGCAGGCGCGCCCGGGCCGTGTGCCTTCTCTCCGCGTGTCCAAACCGTGTCCCCAGCCGCGCGCCATGCGCTCTGGGGGCGTGCGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS GCA 72 bp GGGGCCCACCGGCTCGCCCGCGAGGCTGGCCACCACTaGCCGTTTCTGCTTTCGGGCGCCTCGGGCCATGAA +
Preference number: 6 (lower is better)
Translates to: GAHRLAREAGHH*PFLLSGASGHE
Trigger: TTCATGGCCCGAGGCGCCCGAAAGCAGAAACGGGCAGTGGTGGCCAGCCTCGCGGGCGAGCCGGTGGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 72 bp GCTCCAGCGCGAAGCTGCGCACGCCCCCAGAGCGCATaGCGCGCGGCTGGGGACACGGTTTGGACACGCGGA +
Preference number: 6 (lower is better)
Translates to: APARSCARPQSA*RAAGDTVWTRG
Trigger: TCCGCGTGTCCAAACCGTGTCCCCAGCCGCGCGCCATGCGCTCTGGGGGCGTGCGCAGCTTCGCGCTGGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS GCA 72 bp TGTAGCTCTGCGTGTAAGCCGTGCTCGAGCCCGCGCTaGGCGACTCGGTCCAGTGCACGTGGGCGCGGCCCC +
Preference number: 6 (lower is better)
Translates to: CSSACKPCSSPR*ATRSSARGRGP
Trigger: GGGGCCGCGCCCACGTGCACTGGACCGAGTCGCGCAGCGCGGGCTCGAGCACGGCTTACACGCAGAGCTACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
ENST00000608009.1
CDS GCA 72 bp ATGCAGGGGACGCTCGGGCACCCCCAGGTCCACAGCTaGGGTGTGGCCACGGGACGGCGTGACCTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: MQGTLGHPQVHS*GVATGRRDLSL
Trigger: CAGAGAGAGGTCACGCCGTCCCGTGGCCACACCGCAGCTGTGGACCTGGGGGTGCCCGAGCGTCCCCTGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595712.6
CDS CCA 72 bp GGACGCTCGGGCACCCCCAGGTCCACAGCTGCGGTGTaGCCACGGGACGGCGTGACCTCTCTCTGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: GRSGTPRSTAAV*PRDGVTSLWAS
Trigger: TGAAGCCCAGAGAGAGGTCACGCCGTCCCGTGGCCACACCGCAGCTGTGGACCTGGGGGTGCCCGAGCGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595712.6
CDS TCA 72 bp AGGTCTCCGCGGCCGCGTAGTCGCTGGATACGGCGTTaGCGCCCACGCTGCGACCCTCCAACCAGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: RSPRPRSRWIRR*RPRCDPPTSGW
Trigger: CCACCCACTGGTTGGAGGGTCGCAGCGTGGGCGTCAACGCCGTATCCAGCGACTACGCGGCCGCGGAGACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS GCA 72 bp GGCTCGCCCGCGAGGCTGGCCACCACTGCCCGTTTCTaGTTTCGGGCGCCTCGGGCCATGAACGTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: GSPARLATTARF*FRAPRAMNVCV
Trigger: GACACAGACGTTCATGGCCCGAGGCGCCCGAAAGCAGAAACGGGCAGTGGTGGCCAGCCTCGCGGGCGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 72 bp GCGTCGTGGTCTCCCCGGTATCTGGCGCCAGGAGCGTaGCGCGGTGGCTCACGACCTCCACGCGTTCACTGT +
Preference number: 6 (lower is better)
Translates to: ASWSPRYLAPGA*RGGSRPPRVHC
Trigger: ACAGTGAACGCGTGGAGGTCGTGAGCCACCGCGCCACGCTCCTGGCGCCAGATACCGGGGAGACCACGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222250.5
ENST00000596105.2
ENST00000608009.1
CDS CCA 72 bp AAGCTGCGCACGCCCCCAGAGCGCATGGCGCGCGGCTaGGGACACGGTTTGGACACGCGGAGAGAAGGCACA +
Preference number: 6 (lower is better)
Translates to: KLRTPPERMARG*GHGLDTRREGT
Trigger: TGTGCCTTCTCTCCGCGTGTCCAAACCGTGTCCCCAGCCGCGCGCCATGCGCTCTGGGGGCGTGCGCAGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379656.7
CDS CCA 72 bp GCAGGGGTCCTCCATCCGTACCTGGCGCCAGGAGCGTaGCGCGGTGGCTCACGACCTCCACGCGTTCACTGT +
Preference number: 6 (lower is better)
Translates to: AGVLHPYLAPGA*RGGSRPPRVHC
Trigger: ACAGTGAACGCGTGGAGGTCGTGAGCCACCGCGCCACGCTCCTGGCGCCAGGTACGGATGGAGGACCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000593560.6
CDS CAA 90 bp GACGGAGGTACCGCCGTCCAGGTGGTGGGAGGCACACAACTGGTGTaGGAGCAGGGGTCCTCCATCCGTACCTGGCGCCAGGAGCGTGGC +
Preference number: 6 (lower is better)
Translates to: DGGTAVQVVGGTQLV*EQGSSIRTWRQERG
Trigger: GCCACGCTCCTGGCGCCAGGTACGGATGGAGGACCCCTGCTCCAACACCAGTTGTGTGCCTCCCACCACCTGGACGGCGGTACCTCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000593560.6
CDS GCA 72 bp CCCCCAGCCTCCAGTCCAGCAGGAAGCTGGCGTGGCTaGCCACGCTGGAGGAACGGCTGCCAAAAGGGTGCA +
Preference number: 6 (lower is better)
Translates to: PPASSPAGSWRG*PRWRNGCQKGA
Trigger: TGCACCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCACGCCAGCTTCCTGCTGGACTGGAGGCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 72 bp TCGCGTCCGGGGTGCGAACCCACGACAGGCGGAACCTaGCCTCGAACTCGCGAACCGGCAGCTCAAGATGCC +
Preference number: 6 (lower is better)
Translates to: SRPGCEPTTGGT*PRTREPAAQDA
Trigger: GGCATCTTGAGCTGCCGGTTCGCGAGTTCGAGGCCAGGTTCCGCCTGTCGTGGGTTCGCACCCCGGACGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
CDS CCA 72 bp AAGGCCCCCAGCCTCCAGTCCAGCAGGAAGCTGGCGTaGCTGCCCACGCTGGAGGAACGGCTGCCAAAAGGG +
Preference number: 6 (lower is better)
Translates to: KAPSLQSSRKLA*LPTLEERLPKG
Trigger: CCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCACGCCAGCTTCCTGCTGGACTGGAGGCTGGGGGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 72 bp CAACTGGTGTTGGAGCAGGGGTCCTCCATCCGTACCTaGCGCCAGGAGCGTGGCGCGGTGGCTCACGACCTC +
Preference number: 6 (lower is better)
Translates to: QLVLEQGSSIRT*RQERGAVAHDL
Trigger: GAGGTCGTGAGCCACCGCGCCACGCTCCTGGCGCCAGGTACGGATGGAGGACCCCTGCTCCAACACCAGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000593560.6
CDS CCA 72 bp GGGGTCCCAGGGCTGACGGAGGTACCGCCGTCCAGGTaGTGGGAGGCACACAACTGGTGTTGGAGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: GVPGLTEVPPSR*WEAHNWCWSRG
Trigger: ACCCCTGCTCCAACACCAGTTGTGTGCCTCCCACCACCTGGACGGCGGTACCTCCGTCAGCCCTGGGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000593560.6
CDS CCA 72 bp GCCCCCGTCCCAACCCAGTCCGGTCCGCCTGCTACCTaGGGTGTAGCCCTTGCGGTCGATCTTGGCCGAAAG +
Preference number: 6 (lower is better)
Translates to: APVPTQSGPPAT*GVALAVDLGRK
Trigger: CTTTCGGCCAAGATCGACCGCAAGGGCTACACCCCAGGTAGCAGGCGGACCGGACTGGGTTGGGACGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CAA 90 bp ACGCCCGCGGTCGCGCCGTCCAACTGCACCGAGAACGCTTTCACCTaGTCGAATAGCATCGCGTCCGGGGTGCGAACCCACGACAGGCGG +
Preference number: 6 (lower is better)
Translates to: TPAVAPSNCTENAFT*SNSIASGVRTHDRR
Trigger: CCGCCTGTCGTGGGTTCGCACCCCGGACGCGATGCTATTCGACAAGGTGAAAGCGTTCTCGGTGCAGTTGGACGGCGCGACCGCGGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
CDS TCA 72 bp CCACTGCCCGTTTCTGCTTTCGGGCGCCTCGGGCCATaGACGTCTGTGTCTGCACCACGGCTGCCCGAGGCA +
Preference number: 6 (lower is better)
Translates to: PLPVSAFGRLGP*TSVSAPRLPEA
Trigger: TGCCTCGGGCAGCCGTGGTGCAGACACAGACGTTCATGGCCCGAGGCGCCCGAAAGCAGAAACGGGCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS GCA 72 bp CCTCCACGCGTTCACTGTAGCTCTGCGTGTAAGCCGTaGTCGAGCCCGCGCTGCGCGACTCGGTCCAGTGCA +
Preference number: 6 (lower is better)
Translates to: PPRVHCSSACKP*SSPRCATRSSA
Trigger: TGCACTGGACCGAGTCGCGCAGCGCGGGCTCGAGCACGGCTTACACGCAGAGCTACAGTGAACGCGTGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
ENST00000608009.1
CDS GCA 72 bp GCCTCGGGCCATGAACGTCTGTGTCTGCACCACGGCTaGCCGAGGCAGCACAGGACGTGTGGAGCCGTTGTC +
Preference number: 6 (lower is better)
Translates to: ASGHERLCLHHG*PRQHRTCGAVV
Trigger: GACAACGGCTCCACACGTCCTGTGCTGCCTCGGGCAGCCGTGGTGCAGACACAGACGTTCATGGCCCGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS GCA 72 bp AACACCAGCCCCCGTCCCAACCCAGTCCGGTCCGCCTaGTACCTGGGGTGTAGCCCTTGCGGTCGATCTTGG +
Preference number: 6 (lower is better)
Translates to: NTSPRPNPVRSA*YLGCSPCGRSW
Trigger: CCAAGATCGACCGCAAGGGCTACACCCCAGGTAGCAGGCGGACCGGACTGGGTTGGGACGGGGGCTGGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS GCA 72 bp GGAGCCTCAGTTTCCACCTCTTCCCCGCAGCCCTTGTaGCTGCTCCAGTCATCCTCAGCCCCCGTCCCGCCA +
Preference number: 6 (lower is better)
Translates to: GASVSTSSPQPL*LLQSSSAPVPP
Trigger: TGGCGGGACGGGGGCTGAGGATGACTGGAGCAGGCACAAGGGCTGCGGGGAAGAGGTGGAAACTGAGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600788.6
CDS CCA 72 bp GTCCCAGGGCTGACGGAGGTACCGCCGTCCAGGTGGTaGGAGGCACACAACTGGTGTTGGAGCAGGGGTCCT +
Preference number: 6 (lower is better)
Translates to: VPGLTEVPPSRW*EAHNWCWSRGP
Trigger: AGGACCCCTGCTCCAACACCAGTTGTGTGCCTCCCACCACCTGGACGGCGGTACCTCCGTCAGCCCTGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000593560.6
CDS CCA 72 bp TCCGTGTATCCACCCACCCTCTGCATGCAAGCAGGGTaGGAGCTTACCCTCAGGCCGCTCCGGCAAGGCCCC +
Preference number: 6 (lower is better)
Translates to: SVYPPTLCMQAG*ELTLRPLRQGP
Trigger: GGGGCCTTGCCGGAGCGGCCTGAGGGTAAGCTCCCACCCTGCTTGCATGCAGAGGGTGGGTGGATACACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS GCA 72 bp GATGTCCACAGGCTCGATGACAGTGAACACCTTCCTTaGCCGGCGTGCTGGGACCCAGGGCCGGTGCAGGGT +
Preference number: 6 (lower is better)
Translates to: DVHRLDDSEHLP*PACWDPGPVQG
Trigger: ACCCTGCACCGGCCCTGGGTCCCAGCACGCCGGGCAAGGAAGGTGTTCACTGTCATCGAGCCTGTGGACATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000593560.6
ENST00000595712.6
ENST00000608009.1
ENST00000683912.1
CDS GCA 72 bp CCAGTCCGGTCCGCCTGCTACCTGGGGTGTAGCCCTTaGGGTCGATCTTGGCCGAAAGGGAGACTAGGCCAC +
Preference number: 6 (lower is better)
Translates to: PVRSACYLGCSP*GRSWPKGRLGH
Trigger: GTGGCCTAGTCTCCCTTTCGGCCAAGATCGACCGCAAGGGCTACACCCCAGGTAGCAGGCGGACCGGACTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS GCA 72 bp CCCGGCATCCACCTCTCCGTGTATCCACCCACCCTCTaGATGCAAGCAGGGTGGGAGCTTACCCTCAGGCCG +
Preference number: 6 (lower is better)
Translates to: PGIHLSVYPPTL*MQAGWELTLRP
Trigger: CGGCCTGAGGGTAAGCTCCCACCCTGCTTGCATGCAGAGGGTGGGTGGATACACGGAGAGGTGGATGCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS GCA 72 bp CAGGGGCCAGGAGCTGGCTTGTGCCAGCTCTGGGGCTaGCAGGCTGTATGTCCTTTGGTTGGGATTCCGGGG +
Preference number: 6 (lower is better)
Translates to: QGPGAGLCQLWG*QAVCPLVGIPG
Trigger: CCCCGGAATCCCAACCAAAGGACATACAGCCTGGCAGCCCCAGAGCTGGCACAAGCCAGCTCCTGGCCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS GCA 72 bp CCTCAGTTTCCACCTCTTCCCCGCAGCCCTTGTGCCTaGTCCAGTCATCCTCAGCCCCCGTCCCGCCACAGA +
Preference number: 6 (lower is better)
Translates to: PQFPPLPRSPCA*SSHPQPPSRHR
Trigger: TCTGTGGCGGGACGGGGGCTGAGGATGACTGGAGCAGGCACAAGGGCTGCGGGGAAGAGGTGGAAACTGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600788.6
CDS CCA 72 bp GGCAACCCTGCACCCCAGAGGACTTACGGGGGCAGCTaGAAGCTGAACAGGAACTCATGGCGCCCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: GNPAPQRTYGGS*KLNRNSWRPGG
Trigger: GCCTCCTGGGCGCCATGAGTTCCTGTTCAGCTTCCAGCTGCCCCCGTAAGTCCTCTGGGGTGCAGGGTTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593460.1
ENST00000596105.2
CDS CCA 72 bp CTCGTTGACGTGACTCGAGGCATGTCCAGCCCGATTTaGGGCGGGGGACTCTCGCCCCAGTTGAGGGCCAGA +
Preference number: 6 (lower is better)
Translates to: LVDVTRGMSSPI*GGGLSPQLRAR
Trigger: TCTGGCCCTCAACTGGGGCGAGAGTCCCCCGCCCCAAATCGGGCTGGACATGCCTCGAGTCACGTCAACGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600788.6
ENST00000683912.1
CDS TCA 72 bp GGCACTGTCCCCCAGGGCCAGCAGGATGCCCTACCTTaGGTGCGTAGTCCACGTGTAGAACGCGGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: GTVPQGQQDALP*VRSPRVERGSA
Trigger: TGCACTGCCGCGTTCTACACGTGGACTACGCACTCAAGGTAGGGCATCCTGCTGGCCCTGGGGGACAGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS GCA 72 bp TGGCTGCCCACGCTGGAGGAACGGCTGCCAAAAGGGTaGAAGGGAATGGTGCCGATCACCAGTGGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: WLPTLEERLPKG*KGMVPITSGSS
Trigger: GGAGCTGCCACTGGTGATCGGCACCATTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS GCA 72 bp GGAAGCTGGCGTGGCTGCCCACGCTGGAGGAACGGCTaGCAAAAGGGTGCAAGGGAATGGTGCCGATCACCA +
Preference number: 6 (lower is better)
Translates to: GSWRGCPRWRNG*QKGAREWCRSP
Trigger: TGGTGATCGGCACCATTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCACGCCAGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 72 bp TCCAGTCCAGCAGGAAGCTGGCGTGGCTGCCCACGCTaGAGGAACGGCTGCCAAAAGGGTGCAAGGGAATGG +
Preference number: 6 (lower is better)
Translates to: SSPAGSWRGCPR*RNGCQKGAREW
Trigger: CCATTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCGTGGGCAGCCACGCCAGCTTCCTGCTGGACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CAA 72 bp CCTCCCTGCCAGGGCCCACCTATGACCTCCATCTTATaGGTTGGTGTCGCCCAGCAGCCAGGCAGGCCCCTT +
Preference number: 6 (lower is better)
Translates to: PPCQGPPMTSIL*VGVAQQPGRPL
Trigger: AAGGGGCCTGCCTGGCTGCTGGGCGACACCAACCAATAAGATGGAGGTCATAGGTGGGCCCTGGCAGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CAA 90 bp GTCTGCACCACGGCTGCCCGAGGCAGCACAGGACGTGTGGAGCCGTaGTCGATCTCGGCAAAGACAGGGATGACCTCTCCTGCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: VCTTAARGSTGRVEP*SISAKTGMTSPAAR
Trigger: CCTTGCTGCAGGAGAGGTCATCCCTGTCTTTGCCGAGATCGACAACGGCTCCACACGTCCTGTGCTGCCTCGGGCAGCCGTGGTGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS GCA 72 bp AACACGGGCTCGACGCCCGCGGTCGCGCCGTCCAACTaGACCGAGAACGCTTTCACCTTGTCGAATAGCATC +
Preference number: 6 (lower is better)
Translates to: NTGSTPAVAPSN*TENAFTLSNSI
Trigger: GATGCTATTCGACAAGGTGAAAGCGTTCTCGGTGCAGTTGGACGGCGCGACCGCGGGCGTCGAGCCCGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
CDS GCA 72 bp GTTCCTCGAGGGGTCCCTGTGCCGTTCAGCAAGTCATaGAGCGCGGCCTCATGTCCCCCAAGAGTGGGTTTG +
Preference number: 6 (lower is better)
Translates to: VPRGVPVPFSKS*SAASCPPRVGL
Trigger: CAAACCCACTCTTGGGGGACATGAGGCCGCGCTGCATGACTTGCTGAACGGCACAGGGACCCCTCGAGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 72 bp CGCTGGAGGAACGGCTGCCAAAAGGGTGCAAGGGAATaGTGCCGATCACCAGTGGCAGCTCCAGCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: RWRNGCQKGARE*CRSPVAAPAAA
Trigger: AGCTGCTGCTGGAGCTGCCACTGGTGATCGGCACCATTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 72 bp GCAAGTCATGCAGCGCGGCCTCATGTCCCCCAAGAGTaGGTTTGGATCCTCCTCAGAGTACAGGGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: ASHAARPHVPQE*VWILLRVQGWR
Trigger: CCGCCACCCCTGTACTCTGAGGAGGATCCAAACCCACTCTTGGGGGACATGAGGCCGCGCTGCATGACTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 72 bp CTGCCAGGGCCCACCTATGACCTCCATCTTATTGGTTaGTGTCGCCCAGCAGCCAGGCAGGCCCCTTCCTAC +
Preference number: 6 (lower is better)
Translates to: LPGPTYDLHLIG*CRPAARQAPSY
Trigger: GTAGGAAGGGGCCTGCCTGGCTGCTGGGCGACACCAACCAATAAGATGGAGGTCATAGGTGGGCCCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CAA 72 bp GTCGCGCCGTCCAACTGCACCGAGAACGCTTTCACCTaGTCGAATAGCATCGCGTCCGGGGTGCGAACCCAC +
Preference number: 6 (lower is better)
Translates to: VAPSNCTENAFT*SNSIASGVRTH
Trigger: GTGGGTTCGCACCCCGGACGCGATGCTATTCGACAAGGTGAAAGCGTTCTCGGTGCAGTTGGACGGCGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
CDS CAA 90 bp TGGATCCTCCTCAGAGTACAGGGGTGGCGGGCGGTAGCGGAACTCTaGGATGTAGGCGAAGAACGGGCCTTCAAGGCTCATGTCGGGGTC +
Preference number: 6 (lower is better)
Translates to: WILLRVQGWRAVAEL*DVGEERAFKAHVGV
Trigger: GACCCCGACATGAGCCTTGAAGGCCCGTTCTTCGCCTACATCCAAGAGTTCCGCTACCGCCCGCCACCCCTGTACTCTGAGGAGGATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000595712.6
ENST00000683912.1
CDS CAA 90 bp AACCTACCTCCCCAAGGGTGGCCACTCACCAGCAGGGCTGGCGTGTaGATGTCCACAGGCTCGATGACAGTGAACACCTTCCTTGCCCGG +
Preference number: 6 (lower is better)
Translates to: NLPPQGWPLTSRAGV*MSTGSMTVNTFLAR
Trigger: CCGGGCAAGGAAGGTGTTCACTGTCATCGAGCCTGTGGACATCAACACGCCAGCCCTGCTGGTGAGTGGCCACCCTTGGGGAGGTAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS GCA 72 bp TCGAACTCGCGAACCGGCAGCTCAAGATGCCGACGCTaGAGCCTCAGAACGCAAAATCGCCGTCAACGCGCA +
Preference number: 6 (lower is better)
Translates to: SNSRTGSSRCRR*SLRTQNRRQRA
Trigger: TGCGCGTTGACGGCGATTTTGCGTTCTGAGGCTGCAGCGTCGGCATCTTGAGCTGCCGGTTCGCGAGTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
CDS GCA 72 bp AACCTGGCCTCGAACTCGCGAACCGGCAGCTCAAGATaGCGACGCTGCAGCCTCAGAACGCAAAATCGCCGT +
Preference number: 6 (lower is better)
Translates to: NLASNSRTGSSR*RRCSLRTQNRR
Trigger: ACGGCGATTTTGCGTTCTGAGGCTGCAGCGTCGGCATCTTGAGCTGCCGGTTCGCGAGTTCGAGGCCAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
CDS GCA 72 bp ACGCTTTCACCTTGTCGAATAGCATCGCGTCCGGGGTaGGAACCCACGACAGGCGGAACCTGGCCTCGAACT +
Preference number: 6 (lower is better)
Translates to: TLSPCRIASRPG*EPTTGGTWPRT
Trigger: AGTTCGAGGCCAGGTTCCGCCTGTCGTGGGTTCGCACCCCGGACGCGATGCTATTCGACAAGGTGAAAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222250.5
ENST00000593460.1
ENST00000593560.6
ENST00000596105.2
CDS GCA 72 bp TGGAGGAACGGCTGCCAAAAGGGTGCAAGGGAATGGTaGCGATCACCAGTGGCAGCTCCAGCAGCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: WRNGCQKGAREW*RSPVAAPAAAW
Trigger: CCAAGCTGCTGCTGGAGCTGCCACTGGTGATCGGCACCATTCCCTTGCACCCTTTTGGCAGCCGTTCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000594411.1
ENST00000595712.6
ENST00000683912.1
CDS GCA 72 bp AGCTGGTGTGCAACCTTGTTCCTCGAGGGGTCCCTGTaGCGTTCAGCAAGTCATGCAGCGCGGCCTCATGTC +
Preference number: 6 (lower is better)
Translates to: SWCATLFLEGSL*RSASHAARPHV
Trigger: GACATGAGGCCGCGCTGCATGACTTGCTGAACGGCACAGGGACCCCTCGAGGAACAAGGTTGCACACCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 72 bp GCCTGCTACCTGGGGTGTAGCCCTTGCGGTCGATCTTaGCCGAAAGGGAGACTAGGCCACGGTTACAGTACC +
Preference number: 6 (lower is better)
Translates to: ACYLGCSPCGRS*PKGRLGHGYST
Trigger: GGTACTGTAACCGTGGCCTAGTCTCCCTTTCGGCCAAGATCGACCGCAAGGGCTACACCCCAGGTAGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CCA 72 bp CCAGCTCTGGGGCTGCCAGGCTGTATGTCCTTTGGTTaGGATTCCGGGGGACTCGTGGTGAGAGAGTTGACC +
Preference number: 6 (lower is better)
Translates to: PALGLPGCMSFG*DSGGLVVRELT
Trigger: GGTCAACTCTCTCACCACGAGTCCCCCGGAATCCCAACCAAAGGACATACAGCCTGGCAGCCCCAGAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CAA 72 bp GCCAGCTCTGGGGCTGCCAGGCTGTATGTCCTTTGGTaGGGATTCCGGGGGACTCGTGGTGAGAGAGTTGAC +
Preference number: 6 (lower is better)
Translates to: ASSGAARLYVLW*GFRGTRGERVD
Trigger: GTCAACTCTCTCACCACGAGTCCCCCGGAATCCCAACCAAAGGACATACAGCCTGGCAGCCCCAGAGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CAA 90 bp CAGCCACTCCCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTaGTTCCTCGAGGGGTCCCTGTGCCGTTCAGCAAGTCATGCAGCG +
Preference number: 6 (lower is better)
Translates to: QPLPTVMVAESWCAT*FLEGSLCRSASHAA
Trigger: CGCTGCATGACTTGCTGAACGGCACAGGGACCCCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGGGAGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000595712.6
ENST00000683912.1
CDS CCA 72 bp CCTTCCTACAATACTCCCAACCTACCTCCCCAAGGGTaGCCACTCACCAGCAGGGCTGGCGTGTTGATGTCC +
Preference number: 6 (lower is better)
Translates to: PSYNTPNLPPQG*PLTSRAGVLMS
Trigger: GGACATCAACACGCCAGCCCTGCTGGTGAGTGGCCACCCTTGGGGAGGTAGGTTGGGAGTATTGTAGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CCA 72 bp TGGTGCCGATCACCAGTGGCAGCTCCAGCAGCAGCTTaGACGTTCCTGGGATATCCACACAGACCTGGAGGA +
Preference number: 6 (lower is better)
Translates to: WCRSPVAAPAAA*TFLGYPHRPGG
Trigger: TCCTCCAGGTCTGTGTGGATATCCCAGGAACGTCCAAGCTGCTGCTGGAGCTGCCACTGGTGATCGGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CAA 72 bp CTCAGAGTACAGGGGTGGCGGGCGGTAGCGGAACTCTaGGATGTAGGCGAAGAACGGGCCTTCAAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: LRVQGWRAVAEL*DVGEERAFKAH
Trigger: ATGAGCCTTGAAGGCCCGTTCTTCGCCTACATCCAAGAGTTCCGCTACCGCCCGCCACCCCTGTACTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000595712.6
ENST00000683912.1
CDS CAA 72 bp TTTGGTTGGGATTCCGGGGGACTCGTGGTGAGAGAGTaGACCCGGCATCCACCTCTCCGTGTATCCACCCAC +
Preference number: 6 (lower is better)
Translates to: FGWDSGGLVVRE*TRHPPLRVSTH
Trigger: GTGGGTGGATACACGGAGAGGTGGATGCCGGGTCAACTCTCTCACCACGAGTCCCCCGGAATCCCAACCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CAA 72 bp CCGCTTAGCTGGTGGCTCTGGGCAAATGACAACCTCTaGGAGCCTCAGTTTCCACCTCTTCCCCGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: PLSWWLWANDNL*EPQFPPLPRSP
Trigger: AGGGCTGCGGGGAAGAGGTGGAAACTGAGGCTCCAAGAGGTTGTCATTTGCCCAGAGCCACCAGCTAAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600788.6
CDS CAA 90 bp TGTATGTCCTTTGGTTGGGATTCCGGGGGACTCGTGGTGAGAGAGTaGACCCGGCATCCACCTCTCCGTGTATCCACCCACCCTCTGCAT +
Preference number: 6 (lower is better)
Translates to: CMSFGWDSGGLVVRE*TRHPPLRVSTHPLH
Trigger: ATGCAGAGGGTGGGTGGATACACGGAGAGGTGGATGCCGGGTCAACTCTCTCACCACGAGTCCCCCGGAATCCCAACCAAAGGACATACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CAA 90 bp ATTCAAGTCCCGCTTAGCTGGTGGCTCTGGGCAAATGACAACCTCTaGGAGCCTCAGTTTCCACCTCTTCCCCGCAGCCCTTGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: IQVPLSWWLWANDNL*EPQFPPLPRSPCAC
Trigger: GCAGGCACAAGGGCTGCGGGGAAGAGGTGGAAACTGAGGCTCCAAGAGGTTGTCATTTGCCCAGAGCCACCAGCTAAGCGGGACTTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600788.6
CDS CAA 72 bp CCCACAGTCATGGTGGCTGAAAGCTGGTGTGCAACCTaGTTCCTCGAGGGGTCCCTGTGCCGTTCAGCAAGT +
Preference number: 6 (lower is better)
Translates to: PTVMVAESWCAT*FLEGSLCRSAS
Trigger: ACTTGCTGAACGGCACAGGGACCCCTCGAGGAACAAGGTTGCACACCAGCTTTCAGCCACCATGACTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222250.5
ENST00000379656.7
ENST00000593460.1
ENST00000595712.6
ENST00000683912.1
CDS TCA 72 bp CCACAGTCGCTGTGGAGCTTCCAAACCACCCCCAGCTaGGGGAGGACTTTGGGCAGGGCTTGGTTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: PQSLWSFQTTPS*GRTLGRAWFLF
Trigger: AAAAAGAAACCAAGCCCTGCCCAAAGTCCTCCCTCAGCTGGGGGTGGTTTGGAAGCTCCACAGCGACTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CCA 72 bp TGTTTGCCCTCGAAGGATGTCACCAGGGTCCTAGGGTaGAGGGACGGGACTTCAGGGGACAAGATACAGAGA +
Preference number: 6 (lower is better)
Translates to: CLPSKDVTRVLG*RDGTSGDKIQR
Trigger: TCTCTGTATCTTGTCCCCTGAAGTCCCGTCCCTCCACCCTAGGACCCTGGTGACATCCTTCGAGGGCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS CCA 72 bp GGGCTTCAAGACACTTGCCCAGAGTCACACGGCAAATaGGTGCAGATCCCAGTGGATTCCACACGCATTCCC +
Preference number: 6 (lower is better)
Translates to: GLQDTCPESHGK*VQIPVDSTRIP
Trigger: GGGAATGCGTGTGGAATCCACTGGGATCTGCACCCATTTGCCGTGTGACTCTGGGCAAGTGTCTTGAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS GCA 72 bp TTCAAGACACTTGCCCAGAGTCACACGGCAAATGGGTaGAGATCCCAGTGGATTCCACACGCATTCCCACAC +
Preference number: 6 (lower is better)
Translates to: FKTLAQSHTANG*RSQWIPHAFPH
Trigger: GTGTGGGAATGCGTGTGGAATCCACTGGGATCTGCACCCATTTGCCGTGTGACTCTGGGCAAGTGTCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593460.1
CDS TCA 72 bp AGCCCTAGCTCTGGTCTATTTCACAGAAGAGGCATCTaGGGCTCAGAGAGGGCTTCAAGACACTTGCCCAGA +
Preference number: 6 (lower is better)
Translates to: SPSSGLFHRRGI*GSERASRHLPR
Trigger: TCTGGGCAAGTGTCTTGAAGCCCTCTCTGAGCCTCAGATGCCTCTTCTGTGAAATAGACCAGAGCTAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593460.1