RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARRB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000141480

Ensembl transcript IDs: ENST00000269260.7, ENST00000346341.6, ENST00000381488.10, ENST00000412477.7, ENST00000570718.5, ENST00000570739.5, ENST00000571206.1, ENST00000571428.5, ENST00000571791.5, ENST00000572457.5, ENST00000572497.5, ENST00000572782.1, ENST00000573886.5, ENST00000574502.5, ENST00000574888.5, ENST00000574954.5, ENST00000575131.5, ENST00000575877.5, ENST00000576235.1, ENST00000577054.1

Found 457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CAGTGTGACCCCCACCCAGGCTCCCCCATGACACTCACCCGCCTCGAGACACCATGTACTGGGCGGTGCTaGAGAGGCAGATGTCGGCGT +
Preference number: 2 (lower is better)
Translates to: QCDPHPGSPMTLTRLETPCTGRC*RGRCRR
Trigger: ACGCCGACATCTGCCTCTTCAGCACCGCCCAGTACA...TGGTGTCTCGAGGCGGGTGAGTGTCATGGGGGAGCCTGGGTGGGGGTCACACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576235.1
3UTR-3UTR TCA 90 bp CAGTGTGACCCCCACCCAGGCTCCCCCATGACACTCACCCGCCTCGAGACACCATCTCCCGGTTGTCGCTaGGCAGTGGGGTTATGGTGT +
Preference number: 2 (lower is better)
Translates to: QCDPHPGSPMTLTRLETPSPGCR*AVGLWC
Trigger: ACACCATAACCCCACTGCTCAGCGACAACCGGGAGA...TGGTGTCTCGAGGCGGGTGAGTGTCATGGGGGAGCCTGGGTGGGGGTCACACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000576235.1
3UTR-3UTR CCA 90 bp ATGTCGGCGTACTGTCTCACTCCTTGTCCAGGGAAGCCTCGAGGTGCAGGGACCGTTTCGGCTGAAGGCTaGGGGCCGGGTTTCTCCGGG +
Preference number: 2 (lower is better)
Translates to: MSAYCLTPCPGKPRGAGTVSAEG*GPGFSG
Trigger: CCCGGAGAAACCCGGCCCCCAGCCTTCAGCCGAAAC...GGTCCCTGCACCTCGAGGCTTCCCTGGACAAGGAGTGAGACAGTACGCCGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574502.5
3UTR-3UTR CCA 90 bp CAGTGTGACCCCCACCCAGGCTCCCCCATGACACTCACCCGCCTCGAGACACCAACAGGACACTTGTACTaGGCGGTGCTGAAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: QCDPHPGSPMTLTRLETPTGHLY*AVLKRQ
Trigger: CTGCCTCTTCAGCACCGCCCAGTACAAGTGTCCTGT...TGGTGTCTCGAGGCGGGTGAGTGTCATGGGGGAGCCTGGGTGGGGGTCACACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576235.1
3UTR-3UTR TCA 90 bp CTGAAGAGGCAGATGTCGGCGTACTGTCTCACTCCTTGTCCAGGGAAGCCTCGAGCGTGTGGTTTCGGCTaGAGGCTGGGGGCCGGGTTT +
Preference number: 2 (lower is better)
Translates to: LKRQMSAYCLTPCPGKPRACGFG*RLGAGF
Trigger: AAACCCGGCCCCCAGCCTTCAGCCGAAACCACACGC...TCGAGGCTTCCCTGGACAAGGAGTGAGACAGTACGCCGACATCTGCCTCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574502.5
3UTR-3UTR GCA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGGGTATGAACACAGCTTaGCACCCACGGCGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: ETALSPKGLLLKEWGQREGMNTA*HPRRGW
Trigger: CCAGCCCCGCCGTGGGTGGCAAGCTGTGTTCATACC...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CCA 90 bp AGAGGACGACGACATGGGACTAGAGAGAGCCAGTGTGACCCCCACCCAGGCTCCCCTTCACGATGGTGCTaGAAGCCAGGTTGGTGTCCT +
Preference number: 2 (lower is better)
Translates to: RGRRHGTRESQCDPHPGSPSRWC*KPGWCP
Trigger: AGGACACCAACCTGGCTTCCAGCACCATCGTGAAGG...GGAGCCTGGGTGGGGGTCACACTGGCTCTCTCTAGTCCCATGTCGTCGTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576235.1
3UTR-3UTR GCA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGGTATGAACACAGCTTaGCACCCACGGCGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGGMNTA*HPRRGW
Trigger: CCAGCCCCGCCGTGGGTGGCAAGCTGTGTTCATACC...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR TCA 90 bp GGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATACAAAGGGTCTCCTCTTaGAGGAATGGGGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: GLVPKGSPLEGMGAERVIQRVSS*RNGGRE
Trigger: CTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTG...TATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR TCA 90 bp AGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTTGTACTGGGCGGTGCTaGAGAGGCAGATGTCGGCGT +
Preference number: 2 (lower is better)
Translates to: RYLVILFELSHRTLVLGGCTGRC*RGRCRR
Trigger: ACGCCGACATCTGCCTCTTCAGCACCGCCCAGTACA...ACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
3UTR-3UTR CCA 90 bp GGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAGAAGGGAAGAGGGGCTaGGACAATCCCCCATTGACA +
Preference number: 2 (lower is better)
Translates to: GLVPKGSPLEGMGAERVIEGKRG*DNPPLT
Trigger: TGTCAATGGGGGATTGTCCCAGCCCCTCTTCCCTTC...TATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CCA 90 bp CTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGGAACAGGACACTTGTACTaGGCGGTGCTGAAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LPVVAEQWGYGVHLTECGTGHLY*AVLKRQ
Trigger: CTGCCTCTTCAGCACCGCCCAGTACAAGTGTCCTGT...TCCACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
3UTR-3UTR CCA 90 bp GAAGAGGACGACGACATGGGACTAGAGAGAGCCAGTGTGACCCCCACCCAGGCTTACAGAATGTGGAGCTaGGAGATACCTGGTCATCTT +
Preference number: 2 (lower is better)
Translates to: EEDDDMGLERASVTPTQAYRMWS*EIPGHL
Trigger: AAGATGACCAGGTATCTCCCAGCTCCACATTCTGTA...AGCCTGGGTGGGGGTCACACTGGCTCTCTCTAGTCCCATGTCGTCGTCCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576235.1
3UTR-3UTR GCA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGGTATGAACACAGCTTaGCACCCACGGCGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: FMLRNKETALSPKGLLLKGMNTA*HPRRGW
Trigger: CCAGCCCCGCCGTGGGTGGCAAGCTGTGTTCATACC...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CCA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGGATAATGGGAGGTGTTaGTGTGAGGTTGAGAGTAGG +
Preference number: 2 (lower is better)
Translates to: ETALSPKGLLLKEWGQREDNGRC*CEVESR
Trigger: CCTACTCTCAACCTCACACCAACACCTCCCATTATC...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CCA 90 bp CCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGGAGCTGTTGTCGCTGAGCAGTaGGGTTATGGTGTACACCTT +
Preference number: 2 (lower is better)
Translates to: PVVAEQWGYGVHLTECGAVVAEQ*GYGVHL
Trigger: AAGGTGTACACCATAACCCCACTGCTCAGCGACAAC...AGCTCCACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
3UTR-3UTR CCA 90 bp ATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTGCTCAGACATGAGGAAGTaGCGTGTGGTTTCGGCTGAA +
Preference number: 2 (lower is better)
Translates to: IPGHLVRVEPQDTCTGRCSDMRK*RVVSAE
Trigger: TTCAGCCGAAACCACACGCCACTTCCTCATGTCTGA...GCACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574502.5
3UTR-3UTR TCA 90 bp GAGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTCATCTTGTTCGAGTTaGGCCACAGGACACTTGTAC +
Preference number: 2 (lower is better)
Translates to: EIPGHLVRVEPQDTCTGRSSCSS*ATGHLY
Trigger: GTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGA...CCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
3UTR-3UTR TCA 90 bp TCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGGAGTCATCTTGTTCGAGTTaGGCCACAGGACACTTGTAC +
Preference number: 2 (lower is better)
Translates to: SRLSLSSGVMVYTLQNVESSCSS*ATGHLY
Trigger: GTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGA...CTCCACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
3UTR-3UTR CCA 90 bp GAGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGACACCTTACAGAATGTaGAGCTGGGAGATACCTGGT +
Preference number: 2 (lower is better)
Translates to: EIPGHLVRVEPQDTCTGRTPYRM*SWEIPG
Trigger: ACCAGGTATCTCCCAGCTCCACATTCTGTAAGGTGT...CCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
3UTR-3UTR CCA 90 bp ATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTGCACACCTTACAGAATGTaGAGCTGGGAGATACCTGGT +
Preference number: 2 (lower is better)
Translates to: IPGHLVRVEPQDTCTGRCTPYRM*SWEIPG
Trigger: ACCAGGTATCTCCCAGCTCCACATTCTGTAAGGTGT...GCACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
3UTR-3UTR CCA 90 bp TTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCGAAGGGAAGAGGGGCTaGGACAATCCCCCATTGACA +
Preference number: 2 (lower is better)
Translates to: FSSLCSETKKRPCPQRVSEGKRG*DNPPLT
Trigger: TGTCAATGGGGGATTGTCCCAGCCCCTCTTCCCTTC...GGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CCA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTGAAGGGAAGAGGGGCTaGGACAATCCCCCATTGACA +
Preference number: 2 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPEGKRG*DNPPLT
Trigger: TGTCAATGGGGGATTGTCCCAGCCCCTCTTCCCTTC...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CCA 90 bp TCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTGATAATGGGAGGTGTTaGTGTGAGGTTGAGAGTAGG +
Preference number: 2 (lower is better)
Translates to: SSLCSETKKRPCPQRVSSDNGRC*CEVESR
Trigger: CCTACTCTCAACCTCACACCAACACCTCCCATTATC...AGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR TCA 72 bp CCAGGGAAGCCTCGAGGTGCAGGGACCGGTCAGACATaGGGAAGTGGCGTGTGGTTTCGGCTGAAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: PGKPRGAGTGQT*GSGVWFRLKAG
Trigger: CCCAGCCTTCAGCCGAAACCACACGCCACTTCCTCATGTCTGACCGGTCCCTGCACCTCGAGGCTTCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574502.5
3UTR-3UTR CAA 90 bp GATTCCCAGCACCTCCTTGTTGGCACCCTCCTTCACGATGGTGCTGGAAGCCAGCCCCGCTTCTCCCGGTaGTCGCTGAGCAGTGGGGTT +
Preference number: 3 (lower is better)
Translates to: DSQHLLVGTLLHDGAGSQPRFSR*SLSSGV
Trigger: AACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGG...CTGGCTTCCAGCACCATCGTGAAGGAGGGTGCCAACAAGGAGGTGCTGGGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576235.1
3UTR-3UTR CAA 90 bp CAGTGTGACCCCCACCCAGGCTCCCCCATGACACTCACCCGCCTCGAGACACCAGTCATCTTGTTCGAGTaGAGCCACAGGACACTTGTA +
Preference number: 3 (lower is better)
Translates to: QCDPHPGSPMTLTRLETPVILFE*SHRTLV
Trigger: TACAAGTGTCCTGTGGCTCAACTCGAACAAGATGAC...TGGTGTCTCGAGGCGGGTGAGTGTCATGGGGGAGCCTGGGTGGGGGTCACACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576235.1
3UTR-3UTR CAA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGAGGTATGAACACAGCTaGCCACCCACGGCGGGGCTG +
Preference number: 3 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGRYEHS*PPTAGL
Trigger: CAGCCCCGCCGTGGGTGGCAAGCTGTGTTCATACCT...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CAA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGCCAAAGGGTCTCCTCTaGAAGGAATGGGGGCAGAGA +
Preference number: 3 (lower is better)
Translates to: ETALSPKGLLLKEWGQREPKGLL*KEWGQR
Trigger: TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGG...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CAA 90 bp CCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGGAGCTGTACTGTCTCACTCCTaGTCCAGGGAAGCCTCGAGG +
Preference number: 3 (lower is better)
Translates to: PVVAEQWGYGVHLTECGAVLSHS*SREASR
Trigger: CCTCGAGGCTTCCCTGGACAAGGAGTGAGACAGTAC...AGCTCCACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574502.5
3UTR-3UTR CAA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGAGTGTGAAGGGATaGGTTGAAGAAGCTTCCAGG +
Preference number: 3 (lower is better)
Translates to: KETALSPKGLLLKEWGQRESVKG*VEEASR
Trigger: CCTGGAAGCTTCTTCAACCAATCCCTTCACACTCTC...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CAA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGAACAAAGAAACGGCCTaGTCCCCAAAGGGTCTCCTC +
Preference number: 3 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGNKETA*SPKGLL
Trigger: GAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CAA 90 bp GGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATACGCTTCCTAGCAGAGTaGATCATCATAGTCGTCATC +
Preference number: 3 (lower is better)
Translates to: GLVPKGSPLEGMGAERVIRFLAE*IIIVVI
Trigger: GATGACGACTATGATGATCAACTCTGCTAGGAAGCG...TATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575877.5
3UTR-3UTR CAA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGTTGAGAGTAGGAGTTTaGTCTCCCCCTTTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGLRVGV*SPPFPP
Trigger: AGGAGGGAAAGGGGGAGACAAAACTCCTACTCTCAA...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CAA 90 bp AGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTAGATACCTGGTCATCTaGTTCGAGTTGAGCCACAGG +
Preference number: 3 (lower is better)
Translates to: RYLVILFELSHRTLVLGGRYLVI*FELSHR
Trigger: CCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT...ACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
3UTR-3UTR CAA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGTTGAGAGTAGGAGTTTaGTCTCCCCCTTTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: LRNKETALSPKGLLLKEWLRVGV*SPPFPP
Trigger: AGGAGGGAAAGGGGGAGACAAAACTCCTACTCTCAA...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR CCA 72 bp GTGGGGTTATGGTGTACACCTTACAGAATGTGGAGCTaGGAGATACCTGGTCATCTTGTTCGAGTTGAGCCA +
Preference number: 3 (lower is better)
Translates to: VGLWCTPYRMWS*EIPGHLVRVEP
Trigger: TGGCTCAACTCGAACAAGATGACCAGGTATCTCCCAGCTCCACATTCTGTAAGGTGTACACCATAACCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
3UTR-3UTR CAA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGAACAAAGAAACGGCCTaGTCCCCAAAGGGTCTCCTC +
Preference number: 3 (lower is better)
Translates to: FMLRNKETALSPKGLLLKNKETA*SPKGLL
Trigger: GAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CAA 90 bp TCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGGGACAATCCCCCATaGACAGTGGGGATCTTAATC +
Preference number: 3 (lower is better)
Translates to: SSLCSETKKRPCPQRVSSWDNPP*TVGILI
Trigger: GATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA...AGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CAA 90 bp TCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTGAGAGTGTGAAGGGATaGGTTGAAGAAGCTTCCAGG +
Preference number: 3 (lower is better)
Translates to: SSLCSETKKRPCPQRVSSESVKG*VEEASR
Trigger: CCTGGAAGCTTCTTCAACCAATCCCTTCACACTCTC...AGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CAA 90 bp TTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTGGGACAATCCCCCATaGACAGTGGGGATCTTAATC +
Preference number: 3 (lower is better)
Translates to: FSSLCSETKKRPCPQRVSWDNPP*TVGILI
Trigger: GATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA...GGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
3UTR-3UTR CAA 90 bp ATTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCTGGGACAATCCCCCATaGACAGTGGGGATCTTAATC +
Preference number: 3 (lower is better)
Translates to: IFFFMLRNKETALSPKGLWDNPP*TVGILI
Trigger: GATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA...GAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GGGGCCGGGTTTCTCCGGGGCGAACTGCACCTTTCGGATCACCAGCCGCACAGAGCGTGTGGTTTCGGCTaGAGGCTGGGGGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: GAGFLRGELHLSDHQPHRACGFG*RLGAGF
Trigger: AAACCCGGCCCCCAGCCTTCAGCCGAAACCACACGC...TCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAAACCCGGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR CCA 90 bp GGCCGGGTTTCTCCGGGGCGAACTGCACCTTTCGGATCACCAGCCGCACAGAGTGTTTCGGCTGAAGGCTaGGGGCCGGGTTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GRVSPGRTAPFGSPAAQSVSAEG*GPGFSG
Trigger: CCCGGAGAAACCCGGCCCCCAGCCTTCAGCCGAAAC...ACTCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAAACCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR TCA 90 bp GGGGCCGGGTTTCTCCGGGGCGAACTGCACCTTTCGGATCACCAGCCGCACAGATGTACTGGGCGGTGCTaGAGAGGCAGATGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: GAGFLRGELHLSDHQPHRCTGRC*RGRCRR
Trigger: ACGCCGACATCTGCCTCTTCAGCACCGCCCAGTACA...TCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAAACCCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR GCA 90 bp GCCGGGTTTCTCCGGGGCGAACTGCACCTTTCGGATCACCAGCCGCACAGAGTTCGCTGCCAAGATCCCTaGTCCTCCCCGCGCCAATGC +
Preference number: 4 (lower is better)
Translates to: AGFLRGELHLSDHQPHRVRCQDP*SSPRQC
Trigger: GCATTGGCGCGGGGAGGAGCAGGGATCTTGGCAGCG...AACTCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAAACCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR TCA 90 bp CAGTGTGACCCCCACCCAGGCTCCCCCATGACACTCACCCGCCTCGAGACACCAGGGACCGGTCAGACATaGGGAAGTGGCGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: QCDPHPGSPMTLTRLETPGTGQT*GSGVWF
Trigger: AAACCACACGCCACTTCCTCATGTCTGACCGGTCCC...TGGTGTCTCGAGGCGGGTGAGTGTCATGGGGGAGCCTGGGTGGGGGTCACACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR TCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCTGTCTCCGGAGCGGCTaGCTGGGGTCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPCLRSG*LGSGEG
Trigger: CCCCTCCCCAGACCCCAGTCAGCCGCTCCGGAGACA...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp GGGGCCGGGTTTCTCCGGGGCGAACTGCACCTTTCGGATCACCAGCCGCACAGATTCTCCGGGGCGAACTaGACCTTTCGGATCACCAGC +
Preference number: 4 (lower is better)
Translates to: GAGFLRGELHLSDHQPHRFSGAN*TFRITS
Trigger: GCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAA...TCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAAACCCGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR TCA 90 bp CTGGTAGGTGGCGATGAACAGGTCTTTGCGGAAGGACAAGCCCAGCACATCCAGGTGGCTGGCTCAGGCTaGGCAGCCTCTGCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LVGGDEQVFAEGQAQHIQVAGSG*AASAAR
Trigger: CCTTGCCGCAGAGGCTGCTCAGCCTGAGCCAGCCAC...CTGGATGTGCTGGGCTTGTCCTTCCGCAAAGACCTGTTCATCGCCACCTACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR TCA 90 bp AGGGCGAGACCCCGCTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACAGGGGAGAGGCATCGTaGAGAGGACGACGACATGGG +
Preference number: 4 (lower is better)
Translates to: RARPRFSRLSLSSGVMVYRGEAS*RGRRHG
Trigger: CCCATGTCGTCGTCCTCTTCACGATGCCTCTCCCCT...GTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGGTCTCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR GCA 90 bp CCGGGTTTCTCCGGGGCGAACTGCACCTTTCGGATCACCAGCCGCACAGAGTTCTCCTCTGGGCCTGGCTaGAGTGTGACGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: PGFSGANCTFRITSRTEFSSGPG*SVTEHG
Trigger: TCCATGCTCCGTCACACTGCAGCCAGGCCCAGAGGA...GAACTCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAAACCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR GCA 90 bp CAGTGTGACCCCCACCCAGGCTCCCCCATGACACTCACCCGCCTCGAGACACCACCTCCTTCACGATGGTaGTGGAAGCCAGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: QCDPHPGSPMTLTRLETPPPSRW*WKPGWC
Trigger: ACACCAACCTGGCTTCCAGCACCATCGTGAAGGAGG...TGGTGTCTCGAGGCGGGTGAGTGTCATGGGGGAGCCTGGGTGGGGGTCACACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR CCA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTCCGGAGCGGCTGACTaGGGTCTGGGGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: ETALSPKGLLLKEWGQRESGAAD*GLGRGM
Trigger: CATCCCCCTCCCCAGACCCCAGTCAGCCGCTCCGGA...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCTCCGGAGCGGCTGACTaGGGTCTGGGGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: GWDNPPLTVGILILPSPLSGAAD*GLGRGM
Trigger: CATCCCCCTCCCCAGACCCCAGTCAGCCGCTCCGGA...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp AGAGGACGACGACATGGGACTAGAGAGAGCCAGTGTGACCCCCACCCAGGCTCCCCACAGAGACATCCCTaGGGAAGGGGAGAGGCATCG +
Preference number: 4 (lower is better)
Translates to: RGRRHGTRESQCDPHPGSPQRHP*GRGEAS
Trigger: CGATGCCTCTCCCCTTCCCCAGGGATGTCTCTGTGG...GGAGCCTGGGTGGGGGTCACACTGGCTCTCTCTAGTCCCATGTCGTCGTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR TCA 90 bp AGGGCGAGACCCCGCTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACGGCCTGGCTGCAGTGTaGCGGAGCATGGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: RARPRFSRLSLSSGVMVYGLAAV*RSMEDS
Trigger: AGAATCTTCCATGCTCCGTCACACTGCAGCCAGGCC...GTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGGTCTCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR TCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCGCGTGTGGTTTCGGCTaGAGGCTGGGGGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPACGFG*RLGAGF
Trigger: AAACCCGGCCCCCAGCCTTCAGCCGAAACCACACGC...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp AGGGCGAGACCCCGCTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACGGGACCGGTCAGACATaGGGAAGTGGCGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: RARPRFSRLSLSSGVMVYGTGQT*GSGVWF
Trigger: AAACCACACGCCACTTCCTCATGTCTGACCGGTCCC...GTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGGTCTCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR GCA 90 bp GAAGAGGACGACGACATGGGACTAGAGAGAGCCAGTGTGACCCCCACCCAGGCTTCCTCTGGGCCTGGCTaGAGTGTGACGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: EEDDDMGLERASVTPTQASSGPG*SVTEHG
Trigger: TCCATGCTCCGTCACACTGCAGCCAGGCCCAGAGGA...AGCCTGGGTGGGGGTCACACTGGCTCTCTCTAGTCCCATGTCGTCGTCCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR GCA 90 bp GCGGTCCTTCAGGTAGTCAGGGTCCACAAGCACCACGCCATCTACAGGGTCCACAGGCTGAGCAGCCTCTaGGGCAAGGGGCTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: AVLQVVRVHKHHAIYRVHRLSSL*GKGLAV
Trigger: AACTGCAAGCCCCTTGCCGCAGAGGCTGCTCAGCCT...GTGGACCCTGTAGATGGCGTGGTGCTTGTGGACCCTGACTACCTGAAGGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR CCA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTGTTTCGGCTGAAGGCTaGGGGCCGGGTTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSVSAEG*GPGFSG
Trigger: CCCGGAGAAACCCGGCCCCCAGCCTTCAGCCGAAAC...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCGTTTCGGCTGAAGGCTaGGGGCCGGGTTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GWDNPPLTVGILILPSPLVSAEG*GPGFSG
Trigger: CCCGGAGAAACCCGGCCCCCAGCCTTCAGCCGAAAC...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp AGGGCGAGACCCCGCTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACCCAGCACCTCCTTGTTaGCACCCTCCTTCACGATGG +
Preference number: 4 (lower is better)
Translates to: RARPRFSRLSLSSGVMVYPAPPC*HPPSRW
Trigger: CCATCGTGAAGGAGGGTGCCAACAAGGAGGTGCTGG...GTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGGTCTCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR CCA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCGGCTGACTGGGGTCTaGGGAGGGGGATGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: GWDNPPLTVGILILPSPLRLTGV*GGGCGR
Trigger: ACGACCACATCCCCCTCCCCAGACCCCAGTCAGCCG...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCCGGCTGACTGGGGTCTaGGGAGGGGGATGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPRLTGV*GGGCGR
Trigger: ACGACCACATCCCCCTCCCCAGACCCCAGTCAGCCG...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACTCCGGAGCGGCTGACTaGGGTCTGGGGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNSGAAD*GLGRGM
Trigger: CATCCCCCTCCCCAGACCCCAGTCAGCCGCTCCGGA...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GAAGAGGACGACGACATGGGACTAGAGAGAGCCAGTGTGACCCCCACCCAGGCTTCTCCCGGTTGTCGCTaGGCAGTGGGGTTATGGTGT +
Preference number: 4 (lower is better)
Translates to: EEDDDMGLERASVTPTQASPGCR*AVGLWC
Trigger: ACACCATAACCCCACTGCTCAGCGACAACCGGGAGA...AGCCTGGGTGGGGGTCACACTGGCTCTCTCTAGTCCCATGTCGTCGTCCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR CCA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGAAGGGGTGGGCATGCTaGCCCAGCTTCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ETALSPKGLLLKEWGQREKGWAC*PSFLSS
Trigger: GCTGCTGAGGAAGCTGGGCCAGCATGCCCACCCCTT...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTAAGGGGTGGGCATGCTaGCCCAGCTTCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSKGWAC*PSFLSS
Trigger: GCTGCTGAGGAAGCTGGGCCAGCATGCCCACCCCTT...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TGGGGGCCGGGTTTCTCCGGGGCGAACTGCACCTTTCGGATCACCAGCCGCACAGTTGTCGCTGAGCAGTaGGGTTATGGTGTACACCTT +
Preference number: 4 (lower is better)
Translates to: WGPGFSGANCTFRITSRTVVAEQ*GYGVHL
Trigger: AAGGTGTACACCATAACCCCACTGCTCAGCGACAAC...TGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAAACCCGGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR CCA 90 bp GGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATACGGCTGACTGGGGTCTaGGGAGGGGGATGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: GLVPKGSPLEGMGAERVIRLTGV*GGGCGR
Trigger: ACGACCACATCCCCCTCCCCAGACCCCAGTCAGCCG...TATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCGGCTGACTGGGGTCTaGGGAGGGGGATGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNRLTGV*GGGCGR
Trigger: ACGACCACATCCCCCTCCCCAGACCCCAGTCAGCCG...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCGGCTGACTGGGGTCTaGGGAGGGGGATGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTRLTGV*GGGCGR
Trigger: ACGACCACATCCCCCTCCCCAGACCCCAGTCAGCCG...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GCGGTCCTTCAGGTAGTCAGGGTCCACAAGCACCACGCCATCTACAGGGTCCACTGGCCTCCTCCTCTGTaGTCTTGCTTGGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: AVLQVVRVHKHHAIYRVHWPPPL*SCLGTQ
Trigger: TTGGGTCCCCAAGCAAGACCACAGAGGAGGAGGCCA...GTGGACCCTGTAGATGGCGTGGTGCTTGTGGACCCTGACTACCTGAAGGACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR CCA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCACGGAGCCCTCAAAACTaGCTGCCCTGCCCGGGGATC +
Preference number: 4 (lower is better)
Translates to: WDNPPLTVGILILPSPLPRSPQN*LPCPGI
Trigger: GATCCCCGGGCAGGGCAGCCAGTTTTGAGGGCTCCG...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS-3UTR TCA 90 bp GATTCCCAGCACCTCCTTGTTGGCACCCTCCTTCACGATGGTGCTGGAAGCCAGGGCCTGGCTGCAGTGTaGCGGAGCATGGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: DSQHLLVGTLLHDGAGSQGLAAV*RSMEDS
Trigger: AGAATCTTCCATGCTCCGTCACACTGCAGCCAGGCC...CTGGCTTCCAGCACCATCGTGAAGGAGGGTGCCAACAAGGAGGTGCTGGGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR TCA 90 bp TCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGGAGGCGTGTGGTTTCGGCTaGAGGCTGGGGGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: SRLSLSSGVMVYTLQNVEACGFG*RLGAGF
Trigger: AAACCCGGCCCCCAGCCTTCAGCCGAAACCACACGC...CTCCACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR TCA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCTGTACTGGGCGGTGCTaGAGAGGCAGATGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: GWDNPPLTVGILILPSPLCTGRC*RGRCRR
Trigger: ACGCCGACATCTGCCTCTTCAGCACCGCCCAGTACA...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCTGTACTGGGCGGTGCTaGAGAGGCAGATGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPCTGRC*RGRCRR
Trigger: ACGCCGACATCTGCCTCTTCAGCACCGCCCAGTACA...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGTACTGGGCGGTGCTaGAGAGGCAGATGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: ETALSPKGLLLKEWGQRECTGRC*RGRCRR
Trigger: ACGCCGACATCTGCCTCTTCAGCACCGCCCAGTACA...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGTGTCTCCGGAGCGGCTaGCTGGGGTCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LRNKETALSPKGLLLKEWCLRSG*LGSGEG
Trigger: CCCCTCCCCAGACCCCAGTCAGCCGCTCCGGAGACA...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCGATTGGGGAGGATGGTaGCAGGGCATCGGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTDWGGW*QGIGAL
Trigger: GAGGGCTCCGATGCCCTGTCACCATCCTCCCCAATC...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS-3UTR GCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAAGAAGGGGTGGGCATaGTGGCCCAGCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPKKGWA*WPSFLS
Trigger: GCTGAGGAAGCTGGGCCAGCATGCCCACCCCTTCTT...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCTCCTCTGGGCCTGGCTaGAGTGTGACGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPSSGPG*SVTEHG
Trigger: TCCATGCTCCGTCACACTGCAGCCAGGCCCAGAGGA...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCTCCTCTGGGCCTGGCTaGAGTGTGACGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: GWDNPPLTVGILILPSPLSSGPG*SVTEHG
Trigger: TCCATGCTCCGTCACACTGCAGCCAGGCCCAGAGGA...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCTCCTCTGGGCCTGGCTaGAGTGTGACGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPSSGPG*SVTEHG
Trigger: TCCATGCTCCGTCACACTGCAGCCAGGCCCAGAGGA...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGAGGGAAGCCTCGAGGTaGAGGGACCGGTCAGACATG +
Preference number: 4 (lower is better)
Translates to: ETALSPKGLLLKEWGQREREASR*RDRSDM
Trigger: CATGTCTGACCGGTCCCTGCACCTCGAGGCTTCCCT...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp CACTTTGCGGTCCTTCAGGTAGTCAGGGTCCACAAGCACCACGCCATCTACAGGCCTCCTCTGTGGTCTTaGTTGGGGACCCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: HFAVLQVVRVHKHHAIYRPPLWS*LGTQAC
Trigger: GCAGGCTTGGGTCCCCAAGCAAGACCACAGAGGAGG...CCTGTAGATGGCGTGGTGCTTGTGGACCCTGACTACCTGAAGGACCGCAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR GCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCAAAACTGGCTGCCCTaGCCGGGGATCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTQNWLP*PGISRL
Trigger: CAGCCTGGAGATCCCCGGGCAGGGCAGCCAGTTTTG...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS-3UTR GCA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAGCCCTCAAAACTGGCTaGCCTGCCCGGGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: WDNPPLTVGILILPSPLPALKTG*PARGSP
Trigger: TGGAGATCCCCGGGCAGGGCAGCCAGTTTTGAGGGC...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS-3UTR CCA 90 bp TCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGGAGGTTTCGGCTGAAGGCTaGGGGCCGGGTTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SRLSLSSGVMVYTLQNVEVSAEG*GPGFSG
Trigger: CCCGGAGAAACCCGGCCCCCAGCCTTCAGCCGAAAC...CTCCACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CCA 90 bp GAAGAGGACGACGACATGGGACTAGAGAGAGCCAGTGTGACCCCCACCCAGGCTACAGGACACTTGTACTaGGCGGTGCTGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EEDDDMGLERASVTPTQATGHLY*AVLKRQ
Trigger: CTGCCTCTTCAGCACCGCCCAGTACAAGTGTCCTGT...AGCCTGGGTGGGGGTCACACTGGCTCTCTCTAGTCCCATGTCGTCGTCCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR TCA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCTGGTAGGTGGCGATaGACAGGTCTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GWDNPPLTVGILILPSPLPGRWR*TGLCGR
Trigger: CCTTCCGCAAAGACCTGTTCATCGCCACCTACCAGG...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCCCTGGTAGGTGGCGATaGACAGGTCTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPPGRWR*TGLCGR
Trigger: CCTTCCGCAAAGACCTGTTCATCGCCACCTACCAGG...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGGGCCTGGCTGCAGTGTaGCGGAGCATGGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: ETALSPKGLLLKEWGQREGLAAV*RSMEDS
Trigger: AGAATCTTCCATGCTCCGTCACACTGCAGCCAGGCC...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCGGCCTGGCTGCAGTGTaGCGGAGCATGGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPGLAAV*RSMEDS
Trigger: AGAATCTTCCATGCTCCGTCACACTGCAGCCAGGCC...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CGCTTCCTAGCAGAGTTGATCATCATAGTCGTCATCCTTCATCCCCTTCAGCCGGCGTGTGGTTTCGGCTaGAGGCTGGGGGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: RFLAELIIIVVILHPLQPACGFG*RLGAGF
Trigger: AAACCCGGCCCCCAGCCTTCAGCCGAAACCACACGC...CGGCTGAAGGGGATGAAGGATGACGACTATGATGATCAACTCTGCTAGGAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575877.5
CDS-3UTR TCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCGGGACCGGTCAGACATaGGGAAGTGGCGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPGTGQT*GSGVWF
Trigger: AAACCACACGCCACTTCCTCATGTCTGACCGGTCCC...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTTCTCCCGGTTGTCGCTaGGCAGTGGGGTTATGGTGT +
Preference number: 4 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSSPGCR*AVGLWC
Trigger: ACACCATAACCCCACTGCTCAGCGACAACCGGGAGA...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR TCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCTCTCCCGGTTGTCGCTaGGCAGTGGGGTTATGGTGT +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPSPGCR*AVGLWC
Trigger: ACACCATAACCCCACTGCTCAGCGACAACCGGGAGA...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR TCA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCACCAGCTTCACCTTaGCCCTGTAGGACACCAGGA +
Preference number: 4 (lower is better)
Translates to: GWDNPPLTVGILILPSPLPPASP*PCRTPG
Trigger: TCCTGGTGTCCTACAGGGTCAAGGTGAAGCTGGTGG...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp AGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTACCCAGGCTCCCCCATaGCACTCACCCGCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: RYLVILFELSHRTLVLGGTQAPP*HSPASR
Trigger: TCTCGAGGCGGGTGAGTGTCATGGGGGAGCCTGGGT...ACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR GCA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACTCCTCTGGGCCTGGCTaGAGTGTGACGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNSSGPG*SVTEHG
Trigger: TCCATGCTCCGTCACACTGCAGCCAGGCCCAGAGGA...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp GGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATATCCTCTGGGCCTGGCTaGAGTGTGACGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: GLVPKGSPLEGMGAERVISSGPG*SVTEHG
Trigger: TCCATGCTCCGTCACACTGCAGCCAGGCCCAGAGGA...TATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCTTCTCCGGGGCGAACTaGACCTTTCGGATCACCAGC +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPFSGAN*TFRITS
Trigger: GCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAA...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCAGGGAAGCCTCGAGGTaGAGGGACCGGTCAGACATG +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTREASR*RDRSDM
Trigger: CATGTCTGACCGGTCCCTGCACCTCGAGGCTTCCCT...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp GGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAAGGGAAGCCTCGAGGTaGAGGGACCGGTCAGACATG +
Preference number: 4 (lower is better)
Translates to: GLVPKGSPLEGMGAERVIREASR*RDRSDM
Trigger: CATGTCTGACCGGTCCCTGCACCTCGAGGCTTCCCT...TATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp AACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGGGTATGAACACAGCTTaGCACCCACGGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NKETALSPKGLLLKEWGQGMNTA*HPRRGW
Trigger: CCAGCCCCGCCGTGGGTGGCAAGCTGTGTTCATACC...CTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGGTATGAACACAGCTTaGCACCCACGGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRGMNTA*HPRRGW
Trigger: CCAGCCCCGCCGTGGGTGGCAAGCTGTGTTCATACC...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCGTGAAGAAGAAGGGGTaGGCATGCTGGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GWDNPPLTVGILILPSPLVKKKG*ACWPSF
Trigger: GAAGCTGGGCCAGCATGCCCACCCCTTCTTCTTCAC...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGTTTCGGCTGAAGGCTaGGGGCCGGGTTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGVSAEG*GPGFSG
Trigger: CCCGGAGAAACCCGGCCCCCAGCCTTCAGCCGAAAC...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp AGAGGACGACGACATGGGACTAGAGAGAGCCAGTGTGACCCCCACCCAGGCTCCTCAGACATGAGGAAGTaGCGTGTGGTTTCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RGRRHGTRESQCDPHPGSSDMRK*RVVSAE
Trigger: TTCAGCCGAAACCACACGCCACTTCCTCATGTCTGA...GGAGCCTGGGTGGGGGTCACACTGGCTCTCTCTAGTCCCATGTCGTCGTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR CCA 90 bp GGCCGGGTTTCTCCGGGGCGAACTGCACCTTTCGGATCACCAGCCGCACAGAGTACACCTTACAGAATGTaGAGCTGGGAGATACCTGGT +
Preference number: 4 (lower is better)
Translates to: GRVSPGRTAPFGSPAAQSTPYRM*SWEIPG
Trigger: ACCAGGTATCTCCCAGCTCCACATTCTGTAAGGTGT...ACTCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAAACCCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR CCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCCACCCTCCTTCACGATaGTGCTGGAAGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPHPPSR*CWKPGW
Trigger: CCAACCTGGCTTCCAGCACCATCGTGAAGGAGGGTG...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCCACCCTCCTTCACGATaGTGCTGGAAGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPHPPSR*CWKPGW
Trigger: CCAACCTGGCTTCCAGCACCATCGTGAAGGAGGGTG...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGTCCGGAGCGGCTGACTaGGGTCTGGGGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: LRNKETALSPKGLLLKEWSGAAD*GLGRGM
Trigger: CATCCCCCTCCCCAGACCCCAGTCAGCCGCTCCGGA...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp ACACTTTGCGGTCCTTCAGGTAGTCAGGGTCCACAAGCACCACGCCATCTACAGCTCTGTGGTCTTGCTTaGGGACCCAAGCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TLCGPSGSQGPQAPRHLQLCGLA*GPKPAP
Trigger: TGGGGCAGGCTTGGGTCCCCAAGCAAGACCACAGAG...CTGTAGATGGCGTGGTGCTTGTGGACCCTGACTACCTGAAGGACCGCAAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR CCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCCGGGGATCTCCAGGCTaGGCTATCAGGAAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPRGSPG*AIRKEL
Trigger: CAACTCCTTCCTGATAGCCCAGCCTGGAGATCCCCG...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS-3UTR TCA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCTGGTAGGTGGCGATaGACAGGTCTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNPGRWR*TGLCGR
Trigger: CCTTCCGCAAAGACCTGTTCATCGCCACCTACCAGG...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATACCTGGTAGGTGGCGATaGACAGGTCTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLVPKGSPLEGMGAERVIPGRWR*TGLCGR
Trigger: CCTTCCGCAAAGACCTGTTCATCGCCACCTACCAGG...TATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAGGCCTGGCTGCAGTGTaGCGGAGCATGGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: WDNPPLTVGILILPSPLPGLAAV*RSMEDS
Trigger: AGAATCTTCCATGCTCCGTCACACTGCAGCCAGGCC...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAGGGACCGGTCAGACATaGGGAAGTGGCGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GLVPKGSPLEGMGAERVIGTGQT*GSGVWF
Trigger: AAACCACACGCCACTTCCTCATGTCTGACCGGTCCC...TATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACGGGACCGGTCAGACATaGGGAAGTGGCGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNGTGQT*GSGVWF
Trigger: AAACCACACGCCACTTCCTCATGTCTGACCGGTCCC...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GCCGGGTTTCTCCGGGGCGAACTGCACCTTTCGGATCACCAGCCGCACAGAGTTTCATCTTGTTCGAGTTaGGCCACAGGACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: AGFLRGELHLSDHQPHRVSSCSS*ATGHLY
Trigger: GTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGA...AACTCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAAACCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR TCA 90 bp AGAGGACGACGACATGGGACTAGAGAGAGCCAGTGTGACCCCCACCCAGGCTCCTCATCTTGTTCGAGTTaGGCCACAGGACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: RGRRHGTRESQCDPHPGSSSCSS*ATGHLY
Trigger: GTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGA...GGAGCCTGGGTGGGGGTCACACTGGCTCTCTCTAGTCCCATGTCGTCGTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR TCA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACTCTCCCGGTTGTCGCTaGGCAGTGGGGTTATGGTGT +
Preference number: 4 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNSPGCR*AVGLWC
Trigger: ACACCATAACCCCACTGCTCAGCGACAACCGGGAGA...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR TCA 90 bp GGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATATCTCCCGGTTGTCGCTaGGCAGTGGGGTTATGGTGT +
Preference number: 4 (lower is better)
Translates to: GLVPKGSPLEGMGAERVISPGCR*AVGLWC
Trigger: ACACCATAACCCCACTGCTCAGCGACAACCGGGAGA...TATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR TCA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGTGTCTCCGGAGCGGCTaGCTGGGGTCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FMLRNKETALSPKGLLLKCLRSG*LGSGEG
Trigger: CCCCTCCCCAGACCCCAGTCAGCCGCTCCGGAGACA...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGTCTCCGGAGCGGCTaGCTGGGGTCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSLCSETKKRPCPQRVSSCLRSG*LGSGEG
Trigger: CCCCTCCCCAGACCCCAGTCAGCCGCTCCGGAGACA...AGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCCAAAGGGTCTCCTCTTaGAGGAATGGGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPQRVSS*RNGGRE
Trigger: CTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTG...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCTGCCCAAGTACACGGTaGGCTGAGGATGTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTCPSTR*AEDVKG
Trigger: CCCCTTGACATCCTCAGCTCACCGTGTACTTGGGCA...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS-3UTR GCA 90 bp AACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAAGAAGGGGTGGGCATaGTGGCCCAGCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NKETALSPKGLLLKEWGQKKGWA*WPSFLS
Trigger: GCTGAGGAAGCTGGGCCAGCATGCCCACCCCTTCTT...CTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAAGGGAAGCCTCGAGGTaGAGGGACCGGTCAGACATG +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRREASR*RDRSDM
Trigger: CATGTCTGACCGGTCCCTGCACCTCGAGGCTTCCCT...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp AACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGGGAAGCCTCGAGGTaGAGGGACCGGTCAGACATG +
Preference number: 4 (lower is better)
Translates to: NKETALSPKGLLLKEWGQREASR*RDRSDM
Trigger: CATGTCTGACCGGTCCCTGCACCTCGAGGCTTCCCT...CTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp GGCGAACTGCACCTTTCGGATCACCAGCCGCACAGAGTTCCTTTTGTGGCTTTTAGGGAAGCCTCGAGGTaGAGGGACCGGTCAGACATG +
Preference number: 4 (lower is better)
Translates to: GELHLSDHQPHRVPFVAFREASR*RDRSDM
Trigger: CATGTCTGACCGGTCCCTGCACCTCGAGGCTTCCCT...AAAAGCCACAAAAGGAACTCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR GCA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCTCCTTCACGATGGTaGTGGAAGCCAGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GWDNPPLTVGILILPSPLPPSRW*WKPGWC
Trigger: ACACCAACCTGGCTTCCAGCACCATCGTGAAGGAGG...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR GCA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCTCCTTCACGATGGTaGTGGAAGCCAGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSPPSRW*WKPGWC
Trigger: ACACCAACCTGGCTTCCAGCACCATCGTGAAGGAGG...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp TCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGAAGGGGTGGGCATGCTaGCCCAGCTTCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSPSRKFRYEHSLPPTAKGWAC*PSFLSS
Trigger: GCTGCTGAGGAAGCTGGGCCAGCATGCCCACCCCTT...CGCCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGAAGGGGTGGGCATGCTaGCCCAGCTTCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGKGWAC*PSFLSS
Trigger: GCTGCTGAGGAAGCTGGGCCAGCATGCCCACCCCTT...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCGTGAAGAAGAAGGGGTaGGCATGCTGGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTVKKKG*ACWPSF
Trigger: GAAGCTGGGCCAGCATGCCCACCCCTTCTTCTTCAC...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCTGTATCCTCTGGGCCTaGCTGCAGTGTGACGGAGCA +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTCILWA*LQCDGA
Trigger: TGCTCCGTCACACTGCAGCCAGGCCCAGAGGATACA...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCACAGGACACTTGTACTaGGCGGTGCTGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GWDNPPLTVGILILPSPLTGHLY*AVLKRQ
Trigger: CTGCCTCTTCAGCACCGCCCAGTACAAGTGTCCTGT...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp AGGGCGAGACCCCGCTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACACCTTACAGAATGTaGAGCTGGGAGATACCTGGT +
Preference number: 4 (lower is better)
Translates to: RARPRFSRLSLSSGVMVYTPYRM*SWEIPG
Trigger: ACCAGGTATCTCCCAGCTCCACATTCTGTAAGGTGT...GTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGGTCTCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCCCTTCACGATGGTGCTaGAAGCCAGGTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPPSRWC*KPGWCP
Trigger: AGGACACCAACCTGGCTTCCAGCACCATCGTGAAGG...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCACACCCTCCTTCACGATaGTGCTGGAAGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: WDNPPLTVGILILPSPLPHPPSR*CWKPGW
Trigger: CCAACCTGGCTTCCAGCACCATCGTGAAGGAGGGTG...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCACCAGCACCTCCTTGTTaGCACCCTCCTTCACGATGG +
Preference number: 4 (lower is better)
Translates to: WDNPPLTVGILILPSPLPPAPPC*HPPSRW
Trigger: CCATCGTGAAGGAGGGTGCCAACAAGGAGGTGCTGG...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCAGCACCTCCTTGTTaGCACCCTCCTTCACGATGG +
Preference number: 4 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNPAPPC*HPPSRW
Trigger: CCATCGTGAAGGAGGGTGCCAACAAGGAGGTGCTGG...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp TTTCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGTCCGGAGCGGCTGACTaGGGTCTGGGGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: FHCPLPENLGMNTACHPRSGAAD*GLGRGM
Trigger: CATCCCCCTCCCCAGACCCCAGTCAGCCGCTCCGGA...CCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCGAAGGGAAGAGGGGCTaGGACAATCCCCCATTGACA +
Preference number: 4 (lower is better)
Translates to: GWDNPPLTVGILILPSPLEGKRG*DNPPLT
Trigger: TGTCAATGGGGGATTGTCCCAGCCCCTCTTCCCTTC...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCGAAGGGAAGAGGGGCTaGGACAATCCCCCATTGACA +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPEGKRG*DNPPLT
Trigger: TGTCAATGGGGGATTGTCCCAGCCCCTCTTCCCTTC...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGGTGCTGACTGGGGTCTaGGGAGGGGGATGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: SLSPSRKFRYEHSLPPTAVLTGV*GGGCGR
Trigger: ACGACCACATCCCCCTCCCCAGACCCCAGTCAGCAC...CGCCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000346341.6
CDS-3UTR CCA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGGAGCATGGAAGATTCTaGGGTATCCCCACCCCAGAC +
Preference number: 4 (lower is better)
Translates to: ETALSPKGLLLKEWGQREEHGRF*GIPTPD
Trigger: GTCTGGGGTGGGGATACCCCAGAATCTTCCATGCTC...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000412477.7
CDS-3UTR CCA 90 bp CTGGTAGGTGGCGATGAACAGGTCTTTGCGGAAGGACAAGCCCAGCACATCCAGAGGGCTACAGGCACATaGCTTGCTTTTGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LVGGDEQVFAEGQAQHIQRATGT*LAFGLL
Trigger: GAGGAGGCCAAAAGCAAGCCATGTGCCTGTAGCCCT...CTGGATGTGCTGGGCTTGTCCTTCCGCAAAGACCTGTTCATCGCCACCTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR TCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCTCCACTTTGTCCAGGTaGTCTACGAAGTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPSTLSR*STKSRL
Trigger: CAAGCGGGACTTCGTAGATCACCTGGACAAAGTGGA...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000575877.5
CDS-3UTR TCA 90 bp CTGGTAGGTGGCGATGAACAGGTCTTTGCGGAAGGACAAGCCCAGCACATCCAGTCCACTTTGTCCAGGTaGTCTACGAAGTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LVGGDEQVFAEGQAQHIQSTLSR*STKSRL
Trigger: CAAGCGGGACTTCGTAGATCACCTGGACAAAGTGGA...CTGGATGTGCTGGGCTTGTCCTTCCGCAAAGACCTGTTCATCGCCACCTACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR TCA 90 bp AACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGCCTGGTAGGTGGCGATaGACAGGTCTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: NKETALSPKGLLLKEWGQPGRWR*TGLCGR
Trigger: CCTTCCGCAAAGACCTGTTCATCGCCACCTACCAGG...CTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp AAACACTTTGCGGTCCTTCAGGTAGTCAGGGTCCACAAGCACCACGCCATCTACCCTGGTAGGTGGCGATaGACAGGTCTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: KHFAVLQVVRVHKHHAIYPGRWR*TGLCGR
Trigger: CCTTCCGCAAAGACCTGTTCATCGCCACCTACCAGG...GTAGATGGCGTGGTGCTTGTGGACCCTGACTACCTGAAGGACCGCAAAGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR TCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCGATTCTGGGGTATGGTaGAGAAGAAGGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPDSGVW*RRRGGH
Trigger: ATGCCCACCCCTTCTTCTTCACCATACCCCAGAATC...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCGATTCTGGGGTATGGTaGAGAAGAAGGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPDSGVW*RRRGGH
Trigger: ATGCCCACCCCTTCTTCTTCACCATACCCCAGAATC...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp AACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGGGCCTGGCTGCAGTGTaGCGGAGCATGGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: NKETALSPKGLLLKEWGQGLAAV*RSMEDS
Trigger: AGAATCTTCCATGCTCCGTCACACTGCAGCCAGGCC...CTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGTGTACTGGGCGGTGCTaGAGAGGCAGATGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGCTGRC*RGRCRR
Trigger: ACGCCGACATCTGCCTCTTCAGCACCGCCCAGTACA...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAATGTGTACTGGGCGGTGCTaGAGAGGCAGATGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: LVPKGSPLEGMGAERVIMCTGRC*RGRCRR
Trigger: ACGCCGACATCTGCCTCTTCAGCACCGCCCAGTACA...CATTATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTTGTACTGGGCGGTGCTaGAGAGGCAGATGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: LLPVVAEQWGYGVHLTECCTGRC*RGRCRR
Trigger: ACGCCGACATCTGCCTCTTCAGCACCGCCCAGTACA...ACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR TCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGACCACCAGCTTCACCTTaGCCCTGTAGGACACCAGGA +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRPPASP*PCRTPG
Trigger: TCCTGGTGTCCTACAGGGTCAAGGTGAAGCTGGTGG...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTTGTCTCCGGAGCGGCTaGCTGGGGTCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPCLRSG*LGSGEG
Trigger: CCCCTCCCCAGACCCCAGTCAGCCGCTCCGGAGACA...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCAAAGGGTCTCCTCTTaGAGGAATGGGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNQRVSS*RNGGRE
Trigger: CTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTG...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp AGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTAAGAAGGGGTGGGCATaGTGGCCCAGCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RYLVILFELSHRTLVLGGKKGWA*WPSFLS
Trigger: GCTGAGGAAGCTGGGCCAGCATGCCCACCCCTTCTT...ACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR GCA 90 bp TCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGTCCTCTGGGCCTGGCTaGAGTGTGACGGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: SLSPSRKFRYEHSLPPTASSGPG*SVTEHG
Trigger: TCCATGCTCCGTCACACTGCAGCCAGGCCCAGAGGA...CGCCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp CTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTAGGGAAGCCTCGAGGTaGAGGGACCGGTCAGACATG +
Preference number: 4 (lower is better)
Translates to: LLPVVAEQWGYGVHLTECREASR*RDRSDM
Trigger: CATGTCTGACCGGTCCCTGCACCTCGAGGCTTCCCT...ACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR GCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCTCCTTCACGATGGTaGTGGAAGCCAGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTPPSRW*WKPGWC
Trigger: ACACCAACCTGGCTTCCAGCACCATCGTGAAGGAGG...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp ATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTGCGTGAAGAAGAAGGGGTaGGCATGCTGGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IPGHLVRVEPQDTCTGRCVKKKG*ACWPSF
Trigger: GAAGCTGGGCCAGCATGCCCACCCCTTCTTCTTCAC...GCACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR CCA 90 bp AACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGTGTATCCTCTGGGCCTaGCTGCAGTGTGACGGAGCA +
Preference number: 4 (lower is better)
Translates to: NKETALSPKGLLLKEWGQCILWA*LQCDGA
Trigger: TGCTCCGTCACACTGCAGCCAGGCCCAGAGGATACA...CTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGATGTATCCTCTGGGCCTaGCTGCAGTGTGACGGAGCA +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRCILWA*LQCDGA
Trigger: TGCTCCGTCACACTGCAGCCAGGCCCAGAGGATACA...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGACACCCTCCTTCACGATaGTGCTGGAAGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRHPPSR*CWKPGW
Trigger: CCAACCTGGCTTCCAGCACCATCGTGAAGGAGGGTG...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp GAGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGCACCCTCCTTCACGATaGTGCTGGAAGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EIPGHLVRVEPQDTCTGRHPPSR*CWKPGW
Trigger: CCAACCTGGCTTCCAGCACCATCGTGAAGGAGGGTG...CCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR CCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCGAAGGGAAGAGGGGCTaGGACAATCCCCCATTGACA +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTEGKRG*DNPPLT
Trigger: TGTCAATGGGGGATTGTCCCAGCCCCTCTTCCCTTC...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAGAAGGGAAGAGGGGCTaGGACAATCCCCCATTGACA +
Preference number: 4 (lower is better)
Translates to: WDNPPLTVGILILPSPLPEGKRG*DNPPLT
Trigger: TGTCAATGGGGGATTGTCCCAGCCCCTCTTCCCTTC...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCCAGTGTGACGGAGCATaGAAGATTCTGGGGTATCCC +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPQCDGA*KILGYP
Trigger: GGGATACCCCAGAATCTTCCATGCTCCGTCACACTG...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000412477.7
CDS-3UTR CCA 90 bp AAACACTTTGCGGTCCTTCAGGTAGTCAGGGTCCACAAGCACCACGCCATCTACACGGTGAGCTTGGGTTaGCTCCTAGGAGGGCTACAG +
Preference number: 4 (lower is better)
Translates to: KHFAVLQVVRVHKHHAIYTVSLG*LLGGLQ
Trigger: CTGTAGCCCTCCTAGGAGCCAACCCAAGCTCACCGT...GTAGATGGCGTGGTGCTTGTGGACCCTGACTACCTGAAGGACCGCAAAGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR CCA 90 bp TCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGCCAGCACCTCCTTGTTaGCACCCTCCTTCACGCTGG +
Preference number: 4 (lower is better)
Translates to: SLSPSRKFRYEHSLPPTAPAPPC*HPPSRW
Trigger: CCAGCGTGAAGGAGGGTGCCAACAAGGAGGTGCTGG...CGCCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575877.5
CDS-3UTR TCA 90 bp CTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAATGCCTGGTAGGTGGCGATaGACAGGTCTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LVPKGSPLEGMGAERVIMPGRWR*TGLCGR
Trigger: CCTTCCGCAAAGACCTGTTCATCGCCACCTACCAGG...CATTATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGCCTGGTAGGTGGCGATaGACAGGTCTTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: FSRLSLSSGVMVYTLQNVPGRWR*TGLCGR
Trigger: CCTTCCGCAAAGACCTGTTCATCGCCACCTACCAGG...CACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR TCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCGATTCTGGGGTATGGTaGAGAAGAAGGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTDSGVW*RRRGGH
Trigger: ATGCCCACCCCTTCTTCTTCACCATACCCCAGAATC...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTGCGTGTGGTTTCGGCTaGAGGCTGGGGGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: SSLCSETKKRPCPQRVSSACGFG*RLGAGF
Trigger: AAACCCGGCCCCCAGCCTTCAGCCGAAACCACACGC...AGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGCGTGTGGTTTCGGCTaGAGGCTGGGGGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: FMLRNKETALSPKGLLLKACGFG*RLGAGF
Trigger: AAACCCGGCCCCCAGCCTTCAGCCGAAACCACACGC...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp AGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGGGGACCGGTCAGACATaGGGAAGTGGCGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: RNKETALSPKGLLLKEWGGTGQT*GSGVWF
Trigger: AAACCACACGCCACTTCCTCATGTCTGACCGGTCCC...CCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCT
54% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCACGTGGACATTTACATTaGGGGGCTCCCCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: WDNPPLTVGILILPSPLPRGHLH*GAPHGS
Trigger: ACTACCATGGGGAGCCCCTCAATGTAAATGTCCACG...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGTCTCCCGGTTGTCGCTaGGCAGTGGGGTTATGGTGT +
Preference number: 4 (lower is better)
Translates to: FSRLSLSSGVMVYTLQNVSPGCR*AVGLWC
Trigger: ACACCATAACCCCACTGCTCAGCGACAACCGGGAGA...CACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR TCA 90 bp TCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGCCACCAGCTTCACCTTaGCCCTGTAGGACACCAGGA +
Preference number: 4 (lower is better)
Translates to: SLSPSRKFRYEHSLPPTAPPASP*PCRTPG
Trigger: TCCTGGTGTCCTACAGGGTCAAGGTGAAGCTGGTGG...CGCCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAATGCCACCAGCTTCACCTTaGCCCTGTAGGACACCAGGA +
Preference number: 4 (lower is better)
Translates to: LVPKGSPLEGMGAERVIMPPASP*PCRTPG
Trigger: TCCTGGTGTCCTACAGGGTCAAGGTGAAGCTGGTGG...CATTATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGCCACCAGCTTCACCTTaGCCCTGTAGGACACCAGGA +
Preference number: 4 (lower is better)
Translates to: FSRLSLSSGVMVYTLQNVPPASP*PCRTPG
Trigger: TCCTGGTGTCCTACAGGGTCAAGGTGAAGCTGGTGG...CACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR TCA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAAAGTACACGGTGAGCTaGGGATGTCAAGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: WDNPPLTVGILILPSPLPKYTVS*GCQGVT
Trigger: TGTGACCCCTTGACATCCTCAGCTCACCGTGTACTT...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS-3UTR GCA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGCGCTGCCAAGATCCCTaGTCCTCCCCGCGCCAATGC +
Preference number: 4 (lower is better)
Translates to: FMLRNKETALSPKGLLLKRCQDP*SSPRQC
Trigger: GCATTGGCGCGGGGAGGAGCAGGGATCTTGGCAGCG...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269260.7
CDS-3UTR GCA 90 bp CTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAATGTTCTCCGGGGCGAACTaGACCTTTCGGATCACCAGC +
Preference number: 4 (lower is better)
Translates to: LVPKGSPLEGMGAERVIMFSGAN*TFRITS
Trigger: GCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAA...CATTATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp GGGGCAGAGAGAGTGATAATGGGAGGTGTTGGTGTGAGGTTGAGAGTAGGAGTTTTCTCCGGGGCGAACTaGACCTTTCGGATCACCAGC +
Preference number: 4 (lower is better)
Translates to: GAERVIMGGVGVRLRVGVFSGAN*TFRITS
Trigger: GCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAA...AACTCCTACTCTCAACCTCACACCAACACCTCCCATTATCACTCTCTCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp AGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGTTCTCCGGGGCGAACTaGACCTTTCGGATCACCAGC +
Preference number: 4 (lower is better)
Translates to: RNKETALSPKGLLLKEWGFSGAN*TFRITS
Trigger: GCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAA...CCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp AGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTTTCTCCGGGGCGAACTaGACCTTTCGGATCACCAGC +
Preference number: 4 (lower is better)
Translates to: RYLVILFELSHRTLVLGGFSGAN*TFRITS
Trigger: GCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAA...ACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CCA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGCAGTGTGACGGAGCATaGAAGATTCTGGGGTATGGT +
Preference number: 4 (lower is better)
Translates to: ETALSPKGLLLKEWGQREQCDGA*KILGYG
Trigger: ACCATACCCCAGAATCTTCCATGCTCCGTCACACTG...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGTGTATCCTCTGGGCCTaGCTGCAGTGTGACGGAGCA +
Preference number: 4 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGCILWA*LQCDGA
Trigger: TGCTCCGTCACACTGCAGCCAGGCCCAGAGGATACA...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTTGTATCCTCTGGGCCTaGCTGCAGTGTGACGGAGCA +
Preference number: 4 (lower is better)
Translates to: LLPVVAEQWGYGVHLTECCILWA*LQCDGA
Trigger: TGCTCCGTCACACTGCAGCCAGGCCCAGAGGATACA...ACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CCA 90 bp TTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGTGTATCCTCTGGGCCTaGCTGCAGTGTGACGGAGCA +
Preference number: 4 (lower is better)
Translates to: FSRLSLSSGVMVYTLQNVCILWA*LQCDGA
Trigger: TGCTCCGTCACACTGCAGCCAGGCCCAGAGGATACA...CACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CCA 90 bp TCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTGTTTCGGCTGAAGGCTaGGGGCCGGGTTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SSLCSETKKRPCPQRVSSVSAEG*GPGFSG
Trigger: CCCGGAGAAACCCGGCCCCCAGCCTTCAGCCGAAAC...AGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTCAGACATGAGGAAGTaGCGTGTGGTTTCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: ETALSPKGLLLKEWGQRESDMRK*RVVSAE
Trigger: TTCAGCCGAAACCACACGCCACTTCCTCATGTCTGA...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAACAGGACACTTGTACTaGGCGGTGCTGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRTGHLY*AVLKRQ
Trigger: CTGCCTCTTCAGCACCGCCCAGTACAAGTGTCCTGT...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGCGAACTGCACCTTTCGGATCACCAGCCGCACAGAGTTCCTTTTGTGGCTTTTACAGGACACTTGTACTaGGCGGTGCTGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GELHLSDHQPHRVPFVAFTGHLY*AVLKRQ
Trigger: CTGCCTCTTCAGCACCGCCCAGTACAAGTGTCCTGT...AAAAGCCACAAAAGGAACTCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR CCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGACCTTCACGATGGTGCTaGAAGCCAGGTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRPSRWC*KPGWCP
Trigger: AGGACACCAACCTGGCTTCCAGCACCATCGTGAAGG...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp ATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTGCCCTTCACGATGGTGCTaGAAGCCAGGTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: IPGHLVRVEPQDTCTGRCPSRWC*KPGWCP
Trigger: AGGACACCAACCTGGCTTCCAGCACCATCGTGAAGG...GCACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR CCA 90 bp AGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCACCCTCCTTCACGATaGTGCTGGAAGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RNKETALSPKGLLLKEWGHPPSR*CWKPGW
Trigger: CCAACCTGGCTTCCAGCACCATCGTGAAGGAGGGTG...CCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGCCAGCACCTCCTTGTTaGCACCCTCCTTCACGATGG +
Preference number: 4 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGPAPPC*HPPSRW
Trigger: CCATCGTGAAGGAGGGTGCCAACAAGGAGGTGCTGG...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp AGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCCAGCACCTCCTTGTTaGCACCCTCCTTCACGATGG +
Preference number: 4 (lower is better)
Translates to: RNKETALSPKGLLLKEWGPAPPC*HPPSRW
Trigger: CCATCGTGAAGGAGGGTGCCAACAAGGAGGTGCTGG...CCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR TCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGATCCACTTTGTCCAGGTaGTCTACGAAGTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRSTLSR*STKSRL
Trigger: CAAGCGGGACTTCGTAGATCACCTGGACAAAGTGGA...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000575877.5
CDS-3UTR TCA 90 bp ATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTGCGATTCTGGGGTATGGTaGAGAAGAAGGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: IPGHLVRVEPQDTCTGRCDSGVW*RRRGGH
Trigger: ATGCCCACCCCTTCTTCTTCACCATACCCCAGAATC...GCACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR TCA 90 bp TTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCGCGTGTGGTTTCGGCTaGAGGCTGGGGGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: FSSLCSETKKRPCPQRVSACGFG*RLGAGF
Trigger: AAACCCGGCCCCCAGCCTTCAGCCGAAACCACACGC...GGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTGCGTGTGGTTTCGGCTaGAGGCTGGGGGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPACGFG*RLGAGF
Trigger: AAACCCGGCCCCCAGCCTTCAGCCGAAACCACACGC...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp AACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGCGTGGACATTTACATTaGGGGGCTCCCCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: NKETALSPKGLLLKEWGQRGHLH*GAPHGS
Trigger: ACTACCATGGGGAGCCCCTCAATGTAAATGTCCACG...CTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCTCATCTTGTTCGAGTTaGGCCACAGGACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPSSCSS*ATGHLY
Trigger: GTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGA...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GGGGCAGAGAGAGTGATAATGGGAGGTGTTGGTGTGAGGTTGAGAGTAGGAGTTCAAAGGGTCTCCTCTTaGAGGAATGGGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GAERVIMGGVGVRLRVGVQRVSS*RNGGRE
Trigger: CTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTG...AACTCCTACTCTCAACCTCACACCAACACCTCCCATTATCACTCTCTCTGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TTTCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGGGGGCATCCTCACGGTaGAGAAGAAGGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: FHCPLPENLGMNTACHPRGASSR*RRRGGH
Trigger: ATGCCCACCCCTTCTTCTTCACCGTGAGGATGCCCC...CCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGAAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000412477.7
CDS-3UTR GCA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAGGGTCACAAACACTTTaGGGTCCTTCAGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: WDNPPLTVGILILPSPLPGSQTL*GPSGSQ
Trigger: CTGACTACCTGAAGGACCGCAAAGTGTTTGTGACCC...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTAAGGGGTGGGCATGCTaGCCCAGCTTCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSLCSETKKRPCPQRVSSKGWAC*PSFLSS
Trigger: GCTGCTGAGGAAGCTGGGCCAGCATGCCCACCCCTT...AGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp ACCCCGCTTCCTAGCAGAGTTGATCATCATAGTCGTCATCCTTCATCCCCTTCAGTGAAGAAGAAGGGGTaGGCATGCTGGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TPLPSRVDHHSRHPSSPSVKKKG*ACWPSF
Trigger: GAAGCTGGGCCAGCATGCCCACCCCTTCTTCTTCAC...TGAAGGGGATGAAGGATGACGACTATGATGATCAACTCTGCTAGGAAGCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575877.5
CDS-3UTR CCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCAGTGTGACGGAGCATaGAAGATTCTGGGGTATGGT +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTQCDGA*KILGYG
Trigger: ACCATACCCCAGAATCTTCCATGCTCCGTCACACTG...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGTGTATCCTCTGGGCCTaGCTGCAGTGTGACGGAGCA +
Preference number: 4 (lower is better)
Translates to: LRNKETALSPKGLLLKEWCILWA*LQCDGA
Trigger: TGCTCCGTCACACTGCAGCCAGGCCCAGAGGATACA...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCGTTTCGGCTGAAGGCTaGGGGCCGGGTTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: FSSLCSETKKRPCPQRVSVSAEG*GPGFSG
Trigger: CCCGGAGAAACCCGGCCCCCAGCCTTCAGCCGAAAC...GGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCTCAGACATGAGGAAGTaGCGTGTGGTTTCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTSDMRK*RVVSAE
Trigger: TTCAGCCGAAACCACACGCCACTTCCTCATGTCTGA...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCGAGTTGTTGGTGACGTaGACATTTACATTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPELLVT*TFTLRG
Trigger: GCCCCTCAATGTAAATGTCCACGTCACCAACAACTC...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTGAGTTGTTGGTGACGTaGACATTTACATTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSELLVT*TFTLRG
Trigger: GCCCCTCAATGTAAATGTCCACGTCACCAACAACTC...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGGGCAGAGAGAGTGATAATGGGAGGTGTTGGTGTGAGGTTGAGAGTAGGAGTTACAGGACACTTGTACTaGGCGGTGCTGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GAERVIMGGVGVRLRVGVTGHLY*AVLKRQ
Trigger: CTGCCTCTTCAGCACCGCCCAGTACAAGTGTCCTGT...AACTCCTACTCTCAACCTCACACCAACACCTCCCATTATCACTCTCTCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGACAGGACACTTGTACTaGGCGGTGCTGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGTGHLY*AVLKRQ
Trigger: CTGCCTCTTCAGCACCGCCCAGTACAAGTGTCCTGT...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCACACCTTACAGAATGTaGAGCTGGGAGATACCTGGT +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPTPYRM*SWEIPG
Trigger: ACCAGGTATCTCCCAGCTCCACATTCTGTAAGGTGT...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAGTTGTCGCTGAGCAGTaGGGTTATGGTGTACACCTT +
Preference number: 4 (lower is better)
Translates to: WDNPPLTVGILILPSPLPVVAEQ*GYGVHL
Trigger: AAGGTGTACACCATAACCCCACTGCTCAGCGACAAC...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACGTTGTCGCTGAGCAGTaGGGTTATGGTGTACACCTT +
Preference number: 4 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNVVAEQ*GYGVHL
Trigger: AAGGTGTACACCATAACCCCACTGCTCAGCGACAAC...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp CTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAATGCCTTCACGATGGTGCTaGAAGCCAGGTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LVPKGSPLEGMGAERVIMPSRWC*KPGWCP
Trigger: AGGACACCAACCTGGCTTCCAGCACCATCGTGAAGG...CATTATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTGATAATGGGAGGTGTTaGTGTGAGGTTGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSDNGRC*CEVESR
Trigger: CCTACTCTCAACCTCACACCAACACCTCCCATTATC...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCGATAATGGGAGGTGTTaGTGTGAGGTTGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPDNGRC*CEVESR
Trigger: CCTACTCTCAACCTCACACCAACACCTCCCATTATC...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAATGTCCACTTTGTCCAGGTaGTCTACGAAGTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LVPKGSPLEGMGAERVIMSTLSR*STKSRL
Trigger: CAAGCGGGACTTCGTAGATCACCTGGACAAAGTGGA...CATTATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000575877.5
CDS-3UTR TCA 90 bp TCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGGATTCTGGGGTATGGTaGAGAAGAAGGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLSPSRKFRYEHSLPPTADSGVW*RRRGGH
Trigger: ATGCCCACCCCTTCTTCTTCACCATACCCCAGAATC...CGCCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TTTCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGGGGACCGGTCAGACATaGGGAAGTGGCGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: FHCPLPENLGMNTACHPRGTGQT*GSGVWF
Trigger: AAACCACACGCCACTTCCTCATGTCTGACCGGTCCC...CCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGCGTGGACATTTACATTaGGGGGCTCCCCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGRGHLH*GAPHGS
Trigger: ACTACCATGGGGAGCCCCTCAATGTAAATGTCCACG...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp AGAGTTGATCATCATAGTCGTCATCCTTCATCCCCTTCAGCCGAAGCCGGGCAACGTGGACATTTACATTaGGGGGCTCCCCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: RVDHHSRHPSSPSAEAGQRGHLH*GAPHGS
Trigger: ACTACCATGGGGAGCCCCTCAATGTAAATGTCCACG...TTGCCCGGCTTCGGCTGAAGGGGATGAAGGATGACGACTATGATGATCAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575877.5
CDS-3UTR TCA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCATCATCTTGTTCGAGTTaGGCCACAGGACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: WDNPPLTVGILILPSPLPSSCSS*ATGHLY
Trigger: GTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGA...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGGGTCACAAACACTTTaGGGTCCTTCAGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRGSQTL*GPSGSQ
Trigger: CTGACTACCTGAAGGACCGCAAAGTGTTTGTGACCC...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGAAGAAGGGGTGGGCATaGTGGCCCAGCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: FMLRNKETALSPKGLLLKKKGWA*WPSFLS
Trigger: GCTGAGGAAGCTGGGCCAGCATGCCCACCCCTTCTT...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp TCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTAAGAAGGGGTGGGCATaGTGGCCCAGCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SSLCSETKKRPCPQRVSSKKGWA*WPSFLS
Trigger: GCTGAGGAAGCTGGGCCAGCATGCCCACCCCTTCTT...AGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGAGGGAAGCCTCGAGGTaGAGGGACCGGTCAGACATG +
Preference number: 4 (lower is better)
Translates to: FMLRNKETALSPKGLLLKREASR*RDRSDM
Trigger: CATGTCTGACCGGTCCCTGCACCTCGAGGCTTCCCT...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCGAGCATGGAAGATTCTaGGGTATGGTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPEHGRF*GMVKKK
Trigger: CTTCTTCTTCACCATACCCCAGAATCTTCCATGCTC...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGGAGCTCAGTGTGACGGAGCATaGAAGATTCTGGGGTATGGT +
Preference number: 4 (lower is better)
Translates to: PVVAEQWGYGVHLTECGAQCDGA*KILGYG
Trigger: ACCATACCCCAGAATCTTCCATGCTCCGTCACACTG...AGCTCCACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR CCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGATCAGACATGAGGAAGTaGCGTGTGGTTTCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRSDMRK*RVVSAE
Trigger: TTCAGCCGAAACCACACGCCACTTCCTCATGTCTGA...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCTACAGAATGTGGAGCTaGGAGATACCTGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: GWDNPPLTVGILILPSPLYRMWS*EIPGHL
Trigger: AAGATGACCAGGTATCTCCCAGCTCCACATTCTGTA...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGTTGTCGCTGAGCAGTaGGGTTATGGTGTACACCTT +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRVVAEQ*GYGVHL
Trigger: AAGGTGTACACCATAACCCCACTGCTCAGCGACAAC...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR TCA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGTCCACTTTGTCCAGGTaGTCTACGAAGTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LRNKETALSPKGLLLKEWSTLSR*STKSRL
Trigger: CAAGCGGGACTTCGTAGATCACCTGGACAAAGTGGA...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000575877.5
CDS-3UTR TCA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGGCCTGGCTGCAGTGTaGCGGAGCATGGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: FMLRNKETALSPKGLLLKGLAAV*RSMEDS
Trigger: AGAATCTTCCATGCTCCGTCACACTGCAGCCAGGCC...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp AACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGTCATCTTGTTCGAGTTaGGCCACAGGACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: NKETALSPKGLLLKEWGQSSCSS*ATGHLY
Trigger: GTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGA...CTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGATCATCTTGTTCGAGTTaGGCCACAGGACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRSSCSS*ATGHLY
Trigger: GTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGA...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGTCTCCCGGTTGTCGCTaGGCAGTGGGGTTATGGTGT +
Preference number: 4 (lower is better)
Translates to: FMLRNKETALSPKGLLLKSPGCR*AVGLWC
Trigger: ACACCATAACCCCACTGCTCAGCGACAACCGGGAGA...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR TCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCTGGTATCAAATTCAATaGGGTTGGTGTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTWYQIQ*GWCPQG
Trigger: TCCCTGTGGACACCAACCTCATTGAATTTGATACCA...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACTGGTATCAAATTCAATaGGGTTGGTGTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNWYQIQ*GWCPQG
Trigger: TCCCTGTGGACACCAACCTCATTGAATTTGATACCA...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTAAGAAGGGGTGGGCATaGTGGCCCAGCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPKKGWA*WPSFLS
Trigger: GCTGAGGAAGCTGGGCCAGCATGCCCACCCCTTCTT...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTTTTAGGCTTTTGAGCTaGTCCTTTATCTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSFRLLS*SFISAH
Trigger: GTGTGCAGAGATAAAGGAGCAGCTCAAAAGCCTAAA...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS-3UTR CCA 90 bp TCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTGTGAAGAAGAAGGGGTaGGCATGCTGGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSLCSETKKRPCPQRVSSVKKKG*ACWPSF
Trigger: GAAGCTGGGCCAGCATGCCCACCCCTTCTTCTTCAC...AGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGTGAAGAAGAAGGGGTaGGCATGCTGGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FMLRNKETALSPKGLLLKVKKKG*ACWPSF
Trigger: GAAGCTGGGCCAGCATGCCCACCCCTTCTTCTTCAC...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCGAGCATGGAAGATTCTaGGGTATGGTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: DNPPLTVGILILPSPLPTEHGRF*GMVKKK
Trigger: CTTCTTCTTCACCATACCCCAGAATCTTCCATGCTC...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp AGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGTGTGACGGAGCATaGAAGATTCTGGGGTATGGT +
Preference number: 4 (lower is better)
Translates to: RNKETALSPKGLLLKEWGQCDGA*KILGYG
Trigger: ACCATACCCCAGAATCTTCCATGCTCCGTCACACTG...CCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGCAGTGTGACGGAGCATaGAAGATTCTGGGGTATGGT +
Preference number: 4 (lower is better)
Translates to: SLSPSRKFRYEHSLPPTAQCDGA*KILGYG
Trigger: ACCATACCCCAGAATCTTCCATGCTCCGTCACACTG...CGCCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGGGCAGAGAGAGTGATAATGGGAGGTGTTGGTGTGAGGTTGAGAGTAGGAGTTTCAGACATGAGGAAGTaGCGTGTGGTTTCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GAERVIMGGVGVRLRVGVSDMRK*RVVSAE
Trigger: TTCAGCCGAAACCACACGCCACTTCCTCATGTCTGA...AACTCCTACTCTCAACCTCACACCAACACCTCCCATTATCACTCTCTCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTTCAGACATGAGGAAGTaGCGTGTGGTTTCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLPVVAEQWGYGVHLTECSDMRK*RVVSAE
Trigger: TTCAGCCGAAACCACACGCCACTTCCTCATGTCTGA...ACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTTGTTGGTGACGTaGACATTTACATTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRELLVT*TFTLRG
Trigger: GCCCCTCAATGTAAATGTCCACGTCACCAACAACTC...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACTACAGAATGTGGAGCTaGGAGATACCTGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNYRMWS*EIPGHL
Trigger: AAGATGACCAGGTATCTCCCAGCTCCACATTCTGTA...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CCA 90 bp GGGGCAGAGAGAGTGATAATGGGAGGTGTTGGTGTGAGGTTGAGAGTAGGAGTTGTTGTCGCTGAGCAGTaGGGTTATGGTGTACACCTT +
Preference number: 4 (lower is better)
Translates to: GAERVIMGGVGVRLRVGVVVAEQ*GYGVHL
Trigger: AAGGTGTACACCATAACCCCACTGCTCAGCGACAAC...AACTCCTACTCTCAACCTCACACCAACACCTCCCATTATCACTCTCTCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp AGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTGTTGTCGCTGAGCAGTaGGGTTATGGTGTACACCTT +
Preference number: 4 (lower is better)
Translates to: RYLVILFELSHRTLVLGGVVAEQ*GYGVHL
Trigger: AAGGTGTACACCATAACCCCACTGCTCAGCGACAAC...ACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CCA 90 bp TTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCAAGCACCACGCCATCTaGTCCCGGGTTTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: FSSLCSETKKRPCPQRVSKHHAI*SRVSPP
Trigger: TGGGGGAGAAACCCGGGACCAGATGGCGTGGTGCTT...GGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572457.5
CDS-3UTR CCA 90 bp AGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTGAGCATGGAAGATTCTaGGGTATCTACAGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RYLVILFELSHRTLVLGGEHGRF*GIYRVH
Trigger: GTGGACCCTGTAGATACCCCAGAATCTTCCATGCTC...ACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR TCA 90 bp ATTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCTGTACTGGGCGGTGCTaGAGAGGCAGATGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: IFFFMLRNKETALSPKGLCTGRC*RGRCRR
Trigger: ACGCCGACATCTGCCTCTTCAGCACCGCCCAGTACA...GAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGTCATCTTGTTCGAGTTaGGCCACAGGACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: SLSPSRKFRYEHSLPPTASSCSS*ATGHLY
Trigger: GTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGA...CGCCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGATGGTATCAAATTCAATaGGGTTGGTGTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: KETALSPKGLLLKEWGQRWYQIQ*GWCPQG
Trigger: TCCCTGTGGACACCAACCTCATTGAATTTGATACCA...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTTTCTCCGGGGCGAACTaGACCTTTCGGATCACCAGC +
Preference number: 4 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPFSGAN*TFRITS
Trigger: GCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAA...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTGTGAAGAAGAAGGGGTaGGCATGCTGGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPVKKKG*ACWPSF
Trigger: GAAGCTGGGCCAGCATGCCCACCCCTTCTTCTTCAC...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGGAGGAGCATGGAAGATTCTaGGGTATGGTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SRLSLSSGVMVYTLQNVEEHGRF*GMVKKK
Trigger: CTTCTTCTTCACCATACCCCAGAATCTTCCATGCTC...CTCCACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR CCA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGTCAGACATGAGGAAGTaGCGTGTGGTTTCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LRNKETALSPKGLLLKEWSDMRK*RVVSAE
Trigger: TTCAGCCGAAACCACACGCCACTTCCTCATGTCTGA...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGAGTTGTTGGTGACGTaGACATTTACATTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGELLVT*TFTLRG
Trigger: GCCCCTCAATGTAAATGTCCACGTCACCAACAACTC...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAATGGAGTTGTTGGTGACGTaGACATTTACATTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LVPKGSPLEGMGAERVIMELLVT*TFTLRG
Trigger: GCCCCTCAATGTAAATGTCCACGTCACCAACAACTC...CATTATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGGAGCTTACAGAATGTGGAGCTaGGAGATACCTGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: PVVAEQWGYGVHLTECGAYRMWS*EIPGHL
Trigger: AAGATGACCAGGTATCTCCCAGCTCCACATTCTGTA...AGCTCCACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CCA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGACACCTTACAGAATGTaGAGCTGGGAGATACCTGGT +
Preference number: 4 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGTPYRM*SWEIPG
Trigger: ACCAGGTATCTCCCAGCTCCACATTCTGTAAGGTGT...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp TCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTGAAGGGAAGAGGGGCTaGGACAATCCCCCATTGACA +
Preference number: 4 (lower is better)
Translates to: SSLCSETKKRPCPQRVSSEGKRG*DNPPLT
Trigger: TGTCAATGGGGGATTGTCCCAGCCCCTCTTCCCTTC...AGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp AGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTCAGTGTGACGGAGCATaGAAGATTCTGGGGTATCTA +
Preference number: 4 (lower is better)
Translates to: RYLVILFELSHRTLVLGGQCDGA*KILGYL
Trigger: TAGATACCCCAGAATCTTCCATGCTCCGTCACACTG...ACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR TCA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGATTCTGGGGTATGGTaGAGAAGAAGGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: FMLRNKETALSPKGLLLKDSGVW*RRRGGH
Trigger: ATGCCCACCCCTTCTTCTTCACCATACCCCAGAATC...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp ATTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCGGCCTGGCTGCAGTGTaGCGGAGCATGGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: IFFFMLRNKETALSPKGLGLAAV*RSMEDS
Trigger: AGAATCTTCCATGCTCCGTCACACTGCAGCCAGGCC...GAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp AGAGTTGATCATCATAGTCGTCATCCTTCATCCCCTTCAGCCGAAGCCGGGCAATGGTATCAAATTCAATaGGGTTGGTGTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: RVDHHSRHPSSPSAEAGQWYQIQ*GWCPQG
Trigger: TCCCTGTGGACACCAACCTCATTGAATTTGATACCA...TTGCCCGGCTTCGGCTGAAGGGGATGAAGGATGACGACTATGATGATCAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575877.5
CDS-3UTR GCA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCCTCCTTCACGATGGTaGTGGAAGCCAGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPPPSRW*WKPGWC
Trigger: ACACCAACCTGGCTTCCAGCACCATCGTGAAGGAGG...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp AGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGGAGCATGGAAGATTCTaGGGTATGGTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RNKETALSPKGLLLKEWGEHGRF*GMVKKK
Trigger: CTTCTTCTTCACCATACCCCAGAATCTTCCATGCTC...CCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTACAGGACACTTGTACTaGGCGGTGCTGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPTGHLY*AVLKRQ
Trigger: CTGCCTCTTCAGCACCGCCCAGTACAAGTGTCCTGT...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGACACCTTACAGAATGTaGAGCTGGGAGATACCTGGT +
Preference number: 4 (lower is better)
Translates to: LRNKETALSPKGLLLKEWTPYRM*SWEIPG
Trigger: ACCAGGTATCTCCCAGCTCCACATTCTGTAAGGTGT...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCCTTCACGATGGTGCTaGAAGCCAGGTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPPSRWC*KPGWCP
Trigger: AGGACACCAACCTGGCTTCCAGCACCATCGTGAAGG...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGATAATGGGAGGTGTTaGTGTGAGGTTGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LRNKETALSPKGLLLKEWDNGRC*CEVESR
Trigger: CCTACTCTCAACCTCACACCAACACCTCCCATTATC...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TTTCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGGAGTTGTTGGTGACGTaGACATTTACATTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FHCPLPENLGMNTACHPRELLVT*TFTLRG
Trigger: GCCCCTCAATGTAAATGTCCACGTCACCAACAACTC...CCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TTTCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGACACCTTACAGAATGTaGAGCTGGGAGATACCTGGT +
Preference number: 4 (lower is better)
Translates to: FHCPLPENLGMNTACHPRTPYRM*SWEIPG
Trigger: ACCAGGTATCTCCCAGCTCCACATTCTGTAAGGTGT...CCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGTTGTCGCTGAGCAGTaGGGTTATGGTGTACACCTT +
Preference number: 4 (lower is better)
Translates to: FMLRNKETALSPKGLLLKVVAEQ*GYGVHL
Trigger: AAGGTGTACACCATAACCCCACTGCTCAGCGACAAC...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCCAATGTCATCATCTGTaGCATAGTTGGTATCAAATT +
Preference number: 4 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPQCHHL*HSWYQI
Trigger: AATTTGATACCAACTATGCCACAGATGATGACATTG...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCAATGTCATCATCTGTaGCATAGTTGGTATCAAATT +
Preference number: 4 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSQCHHL*HSWYQI
Trigger: AATTTGATACCAACTATGCCACAGATGATGACATTG...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR GCA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTGGGTCACAAACACTTTaGGGTCCTTCAGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPGSQTL*GPSGSQ
Trigger: CTGACTACCTGAAGGACCGCAAAGTGTTTGTGACCC...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp GGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATACAATGTCATCATCTGTaGCATAGTTGGTATCAAATT +
Preference number: 4 (lower is better)
Translates to: GLVPKGSPLEGMGAERVIQCHHL*HSWYQI
Trigger: AATTTGATACCAACTATGCCACAGATGATGACATTG...TATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR TCA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGTGGTATCAAATTCAATaGGGTTGGTGTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: FMLRNKETALSPKGLLLKWYQIQ*GWCPQG
Trigger: TCCCTGTGGACACCAACCTCATTGAATTTGATACCA...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp ATTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCTCAGACATGAGGAAGTaGCGTGTGGTTTCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: IFFFMLRNKETALSPKGLSDMRK*RVVSAE
Trigger: TTCAGCCGAAACCACACGCCACTTCCTCATGTCTGA...GAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTACAGAATGTGGAGCTaGGAGATACCTGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: SSLCSETKKRPCPQRVSSYRMWS*EIPGHL
Trigger: AAGATGACCAGGTATCTCCCAGCTCCACATTCTGTA...AGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
3UTR CAA 72 bp ATTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTaGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGG +
Preference number: 4 (lower is better)
Translates to: IFFFMLRNKETA*SPKGLLLKEWG
Trigger: CCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCGAGCATGGAAGATTCTaGGGTATGGTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FSSLCSETKKRPCPQRVSEHGRF*GMVKKK
Trigger: CTTCTTCTTCACCATACCCCAGAATCTTCCATGCTC...GGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp TTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTACAGAATGTGGAGCTaGGAGATACCTGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: FSSLCSETKKRPCPQRVSYRMWS*EIPGHL
Trigger: AAGATGACCAGGTATCTCCCAGCTCCACATTCTGTA...GGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CCA 90 bp GGGGCAGAGAGAGTGATAATGGGAGGTGTTGGTGTGAGGTTGAGAGTAGGAGTTCAATGTCATCATCTGTaGCATAGTTGGTATCAAATT +
Preference number: 4 (lower is better)
Translates to: GAERVIMGGVGVRLRVGVQCHHL*HSWYQI
Trigger: AATTTGATACCAACTATGCCACAGATGATGACATTG...AACTCCTACTCTCAACCTCACACCAACACCTCCCATTATCACTCTCTCTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp ATTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCGATAATGGGAGGTGTTaGTGTGAGGTTGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: IFFFMLRNKETALSPKGLDNGRC*CEVESR
Trigger: CCTACTCTCAACCTCACACCAACACCTCCCATTATC...GAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp ATTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCGAGCATGGAAGATTCTaGGGTATGGTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: IFFFMLRNKETALSPKGLEHGRF*GMVKKK
Trigger: CTTCTTCTTCACCATACCCCAGAATCTTCCATGCTC...GAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CCA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGCAATGTCATCATCTGTaGCATAGTTGGTATCAAATT +
Preference number: 4 (lower is better)
Translates to: LRNKETALSPKGLLLKEWQCHHL*HSWYQI
Trigger: AATTTGATACCAACTATGCCACAGATGATGACATTG...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS GCA 90 bp GGTTCGCGGCTCGCTCGCAGCCTCCTCGCCCGCTGCCAAGATCCCTaGTCCTCCCCGCGCCAATGCGCACGCGCGCCCTCCGCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: GSRLARSLLARCQDP*SSPRQCARAPSALS
Trigger: CGAGAGCGCGGAGGGCGCGCGTGCGCATTGGCGCGGGGAGGAGCAGGGATCTTGGCAGCGGGCGAGGAGGCTGCGAGCGAGCCGCGAACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS GCA 90 bp TTGCCCAAGTACACGGTGAGCTGGTCCCGGGTTTCTCCCCCATGGTaGGCGCGCCCGCCGCCCGCTCGGTTCGCGGCTCGCTCGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LPKYTVSWSRVSPPW*ARPPPARFAARSQP
Trigger: AGGCTGCGAGCGAGCCGCGAACCGAGCGGGCGGCGGGCGCGCGCACCATGGGGGAGAAACCCGGGACCAGCTCACCGTGTACTTGGGCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000570739.5
ENST00000574954.5
ENST00000575131.5
CDS GCA 90 bp GGGAGGATGGTGACAGGGCATCGGAGCCCTCAAAACTGGCTGCCCTaGCCGGGGATCTCCAGGCTGGGCTATCAGGAAGGAGTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: GRMVTGHRSPQNWLP*PGISRLGYQEGVVP
Trigger: TGGAACAACTCCTTCCTGATAGCCCAGCCTGGAGATCCCCGGGCAGGGCAGCCAGTTTTGAGGGCTCCGATGCCCTGTCACCATCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS-3UTR CAA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCCCCCGCTTCTCCCGGTaGTCGCTGAGCAGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPPRFSR*SLSSGV
Trigger: AACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGG...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CAA 90 bp AGGGCGAGACCCCGCTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACATTCCCAGCACCTCCTaGTTGGCACCCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: RARPRFSRLSLSSGVMVYIPSTS*LAPSFT
Trigger: CGTGAAGGAGGGTGCCAACAAGGAGGTGCTGGGAAT...GTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGGTCTCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576235.1
CDS-3UTR CAA 90 bp CTGGTAGGTGGCGATGAACAGGTCTTTGCGGAAGGACAAGCCCAGCACATCCAGCCTCTGTGGTCTTGCTaGGGGACCCAAGCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: LVGGDEQVFAEGQAQHIQPLWSC*GTQACP
Trigger: GGGGCAGGCTTGGGTCCCCAAGCAAGACCACAGAGG...CTGGATGTGCTGGGCTTGTCCTTCCGCAAAGACCTGTTCATCGCCACCTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR CAA 90 bp GCGGTCCTTCAGGTAGTCAGGGTCCACAAGCACCACGCCATCTACAGGGTCCACTCCTCCTCTGTGGTCTaGCTTGGGGACCCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: AVLQVVRVHKHHAIYRVHSSSVV*LGDPSL
Trigger: CAGGCTTGGGTCCCCAAGCAAGACCACAGAGGAGGA...GTGGACCCTGTAGATGGCGTGGTGCTTGTGGACCCTGACTACCTGAAGGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS CCA 90 bp GTACACGGTGAGCTTGGGTTGGCTCCTAGGAGGGCTACAGGCACATaGCTTGCTTTTGGCCTCCTCCTCTGTGGTCTTGCTTGGGGACCC +
Preference number: 5 (lower is better)
Translates to: VHGELGLAPRRATGT*LAFGLLLCGLAWGP
Trigger: GGGTCCCCAAGCAAGACCACAGAGGAGGAGGCCAAAAGCAAGCCATGTGCCTGTAGCCCTCCTAGGAGCCAACCCAAGCTCACCGTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570718.5
ENST00000572497.5
CDS-3UTR CAA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCCCGCTTCTCCCGGTaGTCGCTGAGCAGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: DNPPLTVGILILPSPLPTPRFSR*SLSSGV
Trigger: AACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGG...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS GCA 90 bp GGAAGGGGCCCCAGAGAGGAGGCAGATAATCAAGGGCTTCCTGAATaGACTGGGACCCTGAAGGGAAGTGGATCTAGGGTCCCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: GRGPREEADNQGLPE*TGTLKGSGSRVPAS
Trigger: TGAGGCAGGGACCCTAGATCCACTTCCCTTCAGGGTCCCAGTGCATTCAGGAAGCCCTTGATTATCTGCCTCCTCTCTGGGGCCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571791.5
CDS-3UTR CAA 90 bp GGGGCCGGGTTTCTCCGGGGCGAACTGCACCTTTCGGATCACCAGCCGCACAGAGTCATCTTGTTCGAGTaGAGCCACAGGACACTTGTA +
Preference number: 5 (lower is better)
Translates to: GAGFLRGELHLSDHQPHRVILFE*SHRTLV
Trigger: TACAAGTGTCCTGTGGCTCAACTCGAACAAGATGAC...TCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAAACCCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR CAA 90 bp TCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGGAGCCCCGCTTCTCCCGGTaGTCGCTGAGCAGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: SRLSLSSGVMVYTLQNVEPRFSR*SLSSGV
Trigger: AACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGG...CTCCACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CAA 90 bp GAGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGCCCCGCTTCTCCCGGTaGTCGCTGAGCAGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: EIPGHLVRVEPQDTCTGRPRFSR*SLSSGV
Trigger: AACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGG...CCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CAA 90 bp GCGGTCCTTCAGGTAGTCAGGGTCCACAAGCACCACGCCATCTACAGGGTCCACCTACAGGCACATGGCTaGCTTTTGGCCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: AVLQVVRVHKHHAIYRVHLQAHG*LLASSS
Trigger: AGAGGAGGAGGCCAAAAGCAAGCCATGTGCCTGTAG...GTGGACCCTGTAGATGGCGTGGTGCTTGTGGACCCTGACTACCTGAAGGACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR CAA 90 bp CACTTTGCGGTCCTTCAGGTAGTCAGGGTCCACAAGCACCACGCCATCTACAGGTCTGCGGCAAGGGGCTaGCAGTTAGGGCTCGACTTC +
Preference number: 5 (lower is better)
Translates to: HFAVLQVVRVHKHHAIYRSAARG*QLGLDF
Trigger: GAAGTCGAGCCCTAACTGCAAGCCCCTTGCCGCAGA...CCTGTAGATGGCGTGGTGCTTGTGGACCCTGACTACCTGAAGGACCGCAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR CAA 90 bp ATGTCGGCGTACTGTCTCACTCCTTGTCCAGGGAAGCCTCGAGGTGCAGGGACCAAGTACACGGTGAGCTaGCAGTTAGGGCTCGACTTC +
Preference number: 5 (lower is better)
Translates to: MSAYCLTPCPGKPRGAGTKYTVS*QLGLDF
Trigger: GAAGTCGAGCCCTAACTGCAAGCTCACCGTGTACTT...GGTCCCTGCACCTCGAGGCTTCCCTGGACAAGGAGTGAGACAGTACGCCGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR CAA 90 bp AGGGCGAGACCCCGCTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACAGATACCTGGTCATCTaGTTCGAGTTGAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: RARPRFSRLSLSSGVMVYRYLVI*FELSHR
Trigger: CCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT...GTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGGTCTCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CAA 90 bp GGGGCAGAGAGAGTGATAATGGGAGGTGTTGGTGTGAGGTTGAGAGTAGGAGTTCCCCGCTTCTCCCGGTaGTCGCTGAGCAGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: GAERVIMGGVGVRLRVGVPRFSR*SLSSGV
Trigger: AACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGG...AACTCCTACTCTCAACCTCACACCAACACCTCCCATTATCACTCTCTCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS CCA 90 bp CCCTCAGAGCTGTTCCTCCCGTACCTTTCCTGTATCCTCTGGGCCTaGCTGCAGTGTGACGGAGCATGGAAGATTCTGGGGTATGGTGAA +
Preference number: 5 (lower is better)
Translates to: PSELFLPYLSCILWA*LQCDGAWKILGYGE
Trigger: TTCACCATACCCCAGAATCTTCCATGCTCCGTCACACTGCAGCCAGGCCCAGAGGATACAGGAAAGGTACGGGAGGAACAGCTCTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575131.5
CDS-3UTR CAA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACATTCCCAGCACCTCCTaGTTGGCACCCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNIPSTS*LAPSFT
Trigger: CGTGAAGGAGGGTGCCAACAAGGAGGTGCTGGGAAT...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAATGAGGTATGAACACAGCTaGCCACCCACGGCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LVPKGSPLEGMGAERVIMRYEHS*PPTAGL
Trigger: CAGCCCCGCCGTGGGTGGCAAGCTGTGTTCATACCT...CATTATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCCCAAAGGGTCTCCTCTaGAAGGAATGGGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPPKGLL*KEWGQR
Trigger: TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGG...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAAAGGGTCTCCTCTaGAAGGAATGGGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: GWDNPPLTVGILILPSPLPKGLL*KEWGQR
Trigger: TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGG...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp ACACTTTGCGGTCCTTCAGGTAGTCAGGGTCCACAAGCACCACGCCATCTACAGGCACATGGCTTGCTTTaGGCCTCCTCCTCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: TLCGPSGSQGPQAPRHLQAHGLL*ASSSVV
Trigger: GACCACAGAGGAGGAGGCCAAAAGCAAGCCATGTGC...CTGTAGATGGCGTGGTGCTTGTGGACCCTGACTACCTGAAGGACCGCAAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR CAA 90 bp ACACTTTGCGGTCCTTCAGGTAGTCAGGGTCCACAAGCACCACGCCATCTACAGAAGTACACGGTGAGCTaGGGTTGGCTCCTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: TLCGPSGSQGPQAPRHLQKYTVS*GWLLGG
Trigger: CCCTCCTAGGAGCCAACCCAAGCTCACCGTGTACTT...CTGTAGATGGCGTGGTGCTTGTGGACCCTGACTACCTGAAGGACCGCAAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572497.5
CDS-3UTR CAA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCAAGTACACGGTGAGCTaGCAGTTAGGGCTCGACTTC +
Preference number: 5 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPKYTVS*QLGLDF
Trigger: GAAGTCGAGCCCTAACTGCAAGCTCACCGTGTACTT...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000575877.5
CDS-3UTR CAA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCAAGTACACGGTGAGCTaGCAGTTAGGGCTCGACTTC +
Preference number: 5 (lower is better)
Translates to: GWDNPPLTVGILILPSPLKYTVS*QLGLDF
Trigger: GAAGTCGAGCCCTAACTGCAAGCTCACCGTGTACTT...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000575877.5
CDS-3UTR CAA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTAAGTACACGGTGAGCTaGCAGTTAGGGCTCGACTTC +
Preference number: 5 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSKYTVS*QLGLDF
Trigger: GAAGTCGAGCCCTAACTGCAAGCTCACCGTGTACTT...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCCCCGCTTCTCCCGGTaGTCGCTGAGCAGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: FHCPLPENLGMNTACHPRPRFSR*SLSSGV
Trigger: AACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGG...CCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CAA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGAGGTATGAACACAGCTaGCCACCCACGGCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LRNKETALSPKGLLLKEWRYEHS*PPTAGL
Trigger: CAGCCCCGCCGTGGGTGGCAAGCTGTGTTCATACCT...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GAGATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGGTACTGTCTCACTCCTaGTCCAGGGAAGCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: EIPGHLVRVEPQDTCTGRVLSHS*SREASR
Trigger: CCTCGAGGCTTCCCTGGACAAGGAGTGAGACAGTAC...CCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS TCA 90 bp GAGAGGAGGCAGATAATCAAGGGCTTCCTGAATGCACTGGGACCCTaGAGGGAAGTGGATCTAGGGTCCCTGCCTCACTGTTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: ERRQIIKGFLNALGP*REVDLGSLPHCFFQ
Trigger: CTGGAAGAAACAGTGAGGCAGGGACCCTAGATCCACTTCCCTTCAGGGTCCCAGTGCATTCAGGAAGCCCTTGATTATCTGCCTCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571791.5
CDS-3UTR CAA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCGATGAACAGGTCTTaGCGGAAGGACAAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGAMNRS*RKDKPS
Trigger: GCTGGGCTTGTCCTTCCGCAAAGACCTGTTCATCGC...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGAGATACCTGGTCATCTaGTTCGAGTTGAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: ETALSPKGLLLKEWGQRERYLVI*FELSHR
Trigger: CCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CAA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGATTCCCAGCACCTCCTaGTTGGCACCCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGIPSTS*LAPSFT
Trigger: CGTGAAGGAGGGTGCCAACAAGGAGGTGCTGGGAAT...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAATGATTCCCAGCACCTCCTaGTTGGCACCCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: LVPKGSPLEGMGAERVIMIPSTS*LAPSFT
Trigger: CGTGAAGGAGGGTGCCAACAAGGAGGTGCTGGGAAT...CATTATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCTGGGACAATCCCCCATaGACAGTGGGGATCTTAATC +
Preference number: 5 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPWDNPP*TVGILI
Trigger: GATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCGAGAGTGTGAAGGGATaGGTTGAAGAAGCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GWDNPPLTVGILILPSPLESVKG*VEEASR
Trigger: CCTGGAAGCTTCTTCAACCAATCCCTTCACACTCTC...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTTTGAGAGTAGGAGTTTaGTCTCCCCCTTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSLRVGV*SPPFPP
Trigger: AGGAGGGAAAGGGGGAGACAAAACTCCTACTCTCAA...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTTGAGAGTAGGAGTTTaGTCTCCCCCTTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: ETALSPKGLLLKEWGQRELRVGV*SPPFPP
Trigger: AGGAGGGAAAGGGGGAGACAAAACTCCTACTCTCAA...CTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCAACAAAGAAACGGCCTaGTCCCCAAAGGGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: DNPPLTVGILILPSPLPTNKETA*SPKGLL
Trigger: GAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTGTACTGTCTCACTCCTaGTCCAGGGAAGCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: LLPVVAEQWGYGVHLTECVLSHS*SREASR
Trigger: CCTCGAGGCTTCCCTGGACAAGGAGTGAGACAGTAC...ACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CAA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACTTCCTCCCAATAGTGTaGGAAAGTGAGGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNFLPIV*ESEGGG
Trigger: GCCACCACCCTCACTTTCCAACACTATTGGGAGGAA...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS-3UTR CAA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCGTCTTGGTGGAGTTGTaGGTGACGTGGACATTTACA +
Preference number: 5 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPVLVEL*VTWTFT
Trigger: TGTAAATGTCCACGTCACCAACAACTCCACCAAGAC...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTGTCTTGGTGGAGTTGTaGGTGACGTGGACATTTACA +
Preference number: 5 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSVLVEL*VTWTFT
Trigger: TGTAAATGTCCACGTCACCAACAACTCCACCAAGAC...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCACGGTCTTGGTGGAGTaGTTGGTGACGTGGACATTT +
Preference number: 5 (lower is better)
Translates to: DNPPLTVGILILPSPLPTTVLVE*LVTWTF
Trigger: AAATGTCCACGTCACCAACAACTCCACCAAGACCGT...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACGGTCTTGGTGGAGTaGTTGGTGACGTGGACATTT +
Preference number: 5 (lower is better)
Translates to: WDNPPLTVGILILPSPLPTVLVE*LVTWTF
Trigger: AAATGTCCACGTCACCAACAACTCCACCAAGACCGT...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACACGGTCTTGGTGGAGTaGTTGGTGACGTGGACATTT +
Preference number: 5 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNTVLVE*LVTWTF
Trigger: AAATGTCCACGTCACCAACAACTCCACCAAGACCGT...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCATCTTCTTGACGGTCTaGGTGGAGTTGTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: DNPPLTVGILILPSPLPTIFLTV*VELLVT
Trigger: CGTCACCAACAACTCCACCAAGACCGTCAAGAAGAT...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCGAGACTTTGATCTTCTaGACGGTCTTGGTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPETLIF*TVLVEL
Trigger: CAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTC...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACAGATACCTGGTCATCTaGTTCGAGTTGAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNRYLVI*FELSHR
Trigger: CCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
CDS-3UTR CAA 90 bp TTTCTCCGGGGCGAACTGCACCTTTCGGATCACCAGCCGCACAGAGTTCCTTTTAGATACCTGGTCATCTaGTTCGAGTTGAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: FLRGELHLSDHQPHRVPFRYLVI*FELSHR
Trigger: CCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT...AAAAGGAACTCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR CAA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCCGCTTCCTAGCAGAGTaGATCATCATAGTCGTCATC +
Preference number: 5 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPRFLAE*IIIVVI
Trigger: GATGACGACTATGATGATCAACTCTGCTAGGAAGCG...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCGCTTCCTAGCAGAGTaGATCATCATAGTCGTCATC +
Preference number: 5 (lower is better)
Translates to: GWDNPPLTVGILILPSPLRFLAE*IIIVVI
Trigger: GATGACGACTATGATGATCAACTCTGCTAGGAAGCG...GAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCCCGCTTCCTAGCAGAGTaGATCATCATAGTCGTCATC +
Preference number: 5 (lower is better)
Translates to: QSPIDSGDLNPALTSPNPRFLAE*IIIVVI
Trigger: GATGACGACTATGATGATCAACTCTGCTAGGAAGCG...GGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACGAGAGTGTGAAGGGATaGGTTGAAGAAGCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNESVKG*VEEASR
Trigger: CCTGGAAGCTTCTTCAACCAATCCCTTCACACTCTC...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAAACAAAGAAACGGCCTaGTCCCCAAAGGGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: KETALSPKGLLLKEWGQRNKETA*SPKGLL
Trigger: GAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCGCACAGAGTTCCTTTaGTGGCTTTTCTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSRTEFL*WLFSSS
Trigger: ACTAGAAGAGAAAAGCCACAAAAGGAACTCTGTGCG...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAGTCTTGGTGGAGTTGTaGGTGACGTGGACATTTACA +
Preference number: 5 (lower is better)
Translates to: WDNPPLTVGILILPSPLPVLVEL*VTWTFT
Trigger: TGTAAATGTCCACGTCACCAACAACTCCACCAAGAC...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp AACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGACGGTCTTGGTGGAGTaGTTGGTGACGTGGACATTT +
Preference number: 5 (lower is better)
Translates to: NKETALSPKGLLLKEWGQTVLVE*LVTWTF
Trigger: AAATGTCCACGTCACCAACAACTCCACCAAGACCGT...CTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp AACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGATCTTCTTGACGGTCTaGGTGGAGTTGTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: NKETALSPKGLLLKEWGQIFLTV*VELLVT
Trigger: CGTCACCAACAACTCCACCAAGACCGTCAAGAAGAT...CTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAATCTTCTTGACGGTCTaGGTGGAGTTGTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: KETALSPKGLLLKEWGQRIFLTV*VELLVT
Trigger: CGTCACCAACAACTCCACCAAGACCGTCAAGAAGAT...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACGAGACTTTGATCTTCTaGACGGTCTTGGTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNETLIF*TVLVEL
Trigger: CAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTC...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCGAGACTTTGATCTTCTaGACGGTCTTGGTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: DNPPLTVGILILPSPLPTETLIF*TVLVEL
Trigger: CAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTC...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCTGTCTCACAGAGACTTaGATCTTCTTGACGGTCTTG +
Preference number: 5 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPCLTET*IFLTVL
Trigger: CAAGACCGTCAAGAAGATCAAAGTCTCTGTGAGACA...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTTGTCTCACAGAGACTTaGATCTTCTTGACGGTCTTG +
Preference number: 5 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSCLTET*IFLTVL
Trigger: CAAGACCGTCAAGAAGATCAAAGTCTCTGTGAGACA...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAGTCATCTTGTTCGAGTaGAGCCACAGGACACTTGTA +
Preference number: 5 (lower is better)
Translates to: GLVPKGSPLEGMGAERVIVILFE*SHRTLV
Trigger: TACAAGTGTCCTGTGGCTCAACTCGAACAAGATGAC...TATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCGTCATCTTGTTCGAGTaGAGCCACAGGACACTTGTA +
Preference number: 5 (lower is better)
Translates to: DNPPLTVGILILPSPLPTVILFE*SHRTLV
Trigger: TACAAGTGTCCTGTGGCTCAACTCGAACAAGATGAC...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACGTCATCTTGTTCGAGTaGAGCCACAGGACACTTGTA +
Preference number: 5 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNVILFE*SHRTLV
Trigger: TACAAGTGTCCTGTGGCTCAACTCGAACAAGATGAC...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp ATTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCCCCGCTTCTCCCGGTaGTCGCTGAGCAGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: IFFFMLRNKETALSPKGLPRFSR*SLSSGV
Trigger: AACCCCACTGCTCAGCGACAACCGGGAGAAGCGGGG...GAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CAA 90 bp GGGCTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTTCAAATTCAATGAGGTaGGTGTCCACAGGGACATCT +
Preference number: 5 (lower is better)
Translates to: GLGQSPIDSGDLNPALTSSNSMR*VSTGTS
Trigger: AGATGTCCCTGTGGACACCAACCTCATTGAATTTGA...AGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CTGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCTCAAATTCAATGAGGTaGGTGTCCACAGGGACATCT +
Preference number: 5 (lower is better)
Translates to: LGQSPIDSGDLNPALTSPSNSMR*VSTGTS
Trigger: AGATGTCCCTGTGGACACCAACCTCATTGAATTTGA...GGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTAGGTATGAACACAGCTaGCCACCCACGGCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPRYEHS*PPTAGL
Trigger: CAGCCCCGCCGTGGGTGGCAAGCTGTGTTCATACCT...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCAGGTATGAACACAGCTaGCCACCCACGGCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FSSLCSETKKRPCPQRVSRYEHS*PPTAGL
Trigger: CAGCCCCGCCGTGGGTGGCAAGCTGTGTTCATACCT...GGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGATTGAGAGTAGGAGTTTaGTCTCCCCCTTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: KETALSPKGLLLKEWGQRLRVGV*SPPFPP
Trigger: AGGAGGGAAAGGGGGAGACAAAACTCCTACTCTCAA...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGCCAAAGGGTCTCCTCTaGAAGGAATGGGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: LRNKETALSPKGLLLKEWPKGLL*KEWGQR
Trigger: TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGG...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CCACCCCGCTTCCTAGCAGAGTTGATCATCATAGTCGTCATCCTTCATCCCCTTAACAAAGAAACGGCCTaGTCCCCAAAGGGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: PPRFLAELIIIVVILHPLNKETA*SPKGLL
Trigger: GAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT...AAGGGGATGAAGGATGACGACTATGATGATCAACTCTGCTAGGAAGCGGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575877.5
CDS-3UTR CAA 90 bp GACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACCCGCACAGAGTTCCTTTaGTGGCTTTTCTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: DNPPLTVGILILPSPLPTRTEFL*WLFSSS
Trigger: ACTAGAAGAGAAAAGCCACAAAAGGAACTCTGTGCG...GGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTCTCCGGGGCGAACTGCACCTTTCGGATCACCAGCCGCACAGAGTTCCTTTTCGCACAGAGTTCCTTTaGTGGCTTTTCTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: FLRGELHLSDHQPHRVPFRTEFL*WLFSSS
Trigger: ACTAGAAGAGAAAAGCCACAAAAGGAACTCTGTGCG...AAAAGGAACTCTGTGCGGCTGGTGATCCGAAAGGTGCAGTTCGCCCCGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS-3UTR CAA 90 bp AACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGGTCTTGGTGGAGTTGTaGGTGACGTGGACATTTACA +
Preference number: 5 (lower is better)
Translates to: NKETALSPKGLLLKEWGQVLVEL*VTWTFT
Trigger: TGTAAATGTCCACGTCACCAACAACTCCACCAAGAC...CTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATATGTCTCACAGAGACTTaGATCTTCTTGACGGTCTTG +
Preference number: 5 (lower is better)
Translates to: GLVPKGSPLEGMGAERVICLTET*IFLTVL
Trigger: CAAGACCGTCAAGAAGATCAAAGTCTCTGTGAGACA...TATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACTGTCTCACAGAGACTTaGATCTTCTTGACGGTCTTG +
Preference number: 5 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNCLTET*IFLTVL
Trigger: CAAGACCGTCAAGAAGATCAAAGTCTCTGTGAGACA...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp ATACCTGGTCATCTTGTTCGAGTTGAGCCACAGGACACTTGTACTGGGCGGTGCGTCATCTTGTTCGAGTaGAGCCACAGGACACTTGTA +
Preference number: 5 (lower is better)
Translates to: IPGHLVRVEPQDTCTGRCVILFE*SHRTLV
Trigger: TACAAGTGTCCTGTGGCTCAACTCGAACAAGATGAC...GCACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CAA 90 bp TCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGAGATACCTGGTCATCTaGTTCGAGTTGAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: SLSPSRKFRYEHSLPPTARYLVI*FELSHR
Trigger: CCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT...CGCCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CAA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGATTCCCAGCACCTCCTaGTTGGCACCCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: FMLRNKETALSPKGLLLKIPSTS*LAPSFT
Trigger: CGTGAAGGAGGGTGCCAACAAGGAGGTGCTGGGAAT...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TGGGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCATCAAATTCAATGAGGTaGGTGTCCACAGGGACATCT +
Preference number: 5 (lower is better)
Translates to: WDNPPLTVGILILPSPLPSNSMR*VSTGTS
Trigger: AGATGTCCCTGTGGACACCAACCTCATTGAATTTGA...TGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000571206.1
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp AGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGTGGGACAATCCCCCATaGACAGTGGGGATCTTAATC +
Preference number: 5 (lower is better)
Translates to: RNKETALSPKGLLLKEWGWDNPP*TVGILI
Trigger: GATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA...CCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CGCTTCCTAGCAGAGTTGATCATCATAGTCGTCATCCTTCATCCCCTTCAGCCGTGGGACAATCCCCCATaGACAGTGGGGATCTTAATC +
Preference number: 5 (lower is better)
Translates to: RFLAELIIIVVILHPLQPWDNPP*TVGILI
Trigger: GATTAAGATCCCCACTGTCAATGGGGGATTGTCCCA...CGGCTGAAGGGGATGAAGGATGACGACTATGATGATCAACTCTGCTAGGAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575877.5
CDS-3UTR CAA 90 bp AGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGGAGAGTGTGAAGGGATaGGTTGAAGAAGCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: RNKETALSPKGLLLKEWGESVKG*VEEASR
Trigger: CCTGGAAGCTTCTTCAACCAATCCCTTCACACTCTC...CCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGAGAGTGTGAAGGGATaGGTTGAAGAAGCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QKQRNGLVPKGSPLEGMGESVKG*VEEASR
Trigger: CCTGGAAGCTTCTTCAACCAATCCCTTCACACTCTC...CCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp ACCCCGCTTCCTAGCAGAGTTGATCATCATAGTCGTCATCCTTCATCCCCTTCATTCACGCTGGTCATCTaGTTCGAGTTGAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: TPLPSRVDHHSRHPSSPSFTLVI*FELSHR
Trigger: CCTGTGGCTCAACTCGAACAAGATGACCAGCGTGAA...TGAAGGGGATGAAGGATGACGACTATGATGATCAACTCTGCTAGGAAGCGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575877.5
CDS-3UTR CAA 90 bp GGACAATCCCCCATTGACAGTGGGGATCTTAATCCTGCCCTCACCTCTCCCAACTGGACCTTTAGGCTTTaGAGCTGCTCCTTTATCTCT +
Preference number: 5 (lower is better)
Translates to: GQSPIDSGDLNPALTSPNWTFRL*SCSFIS
Trigger: AGAGATAAAGGAGCAGCTCAAAAGCCTAAAGGTCCA...GTTGGGAGAGGTGAGGGCAGGATTAAGATCCCCACTGTCAATGGGGGATTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS-3UTR CAA 90 bp AAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGACGCACAGAGTTCCTTTaGTGGCTTTTCTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: KETALSPKGLLLKEWGQRRTEFL*WLFSSS
Trigger: ACTAGAAGAGAAAAGCCACAAAAGGAACTCTGTGCG...TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGGTCTTGGTGGAGTTGTaGGTGACGTGGACATTTACA +
Preference number: 5 (lower is better)
Translates to: SLSPSRKFRYEHSLPPTAVLVEL*VTWTFT
Trigger: TGTAAATGTCCACGTCACCAACAACTCCACCAAGAC...CGCCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGATCTTCTTGACGGTCTaGGTGGAGTTGTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: LRNKETALSPKGLLLKEWIFLTV*VELLVT
Trigger: CGTCACCAACAACTCCACCAAGACCGTCAAGAAGAT...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp AGAGTTGATCATCATAGTCGTCATCCTTCATCCCCTTCAGCCGAAGCCGGGCAAGTCATCTTGTTCGAGTaGAGCCACAGGACACTTGTA +
Preference number: 5 (lower is better)
Translates to: RVDHHSRHPSSPSAEAGQVILFE*SHRTLV
Trigger: TACAAGTGTCCTGTGGCTCAACTCGAACAAGATGAC...TTGCCCGGCTTCGGCTGAAGGGGATGAAGGATGACGACTATGATGATCAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGCCAAAGGGTCTCCTCTaGAAGGAATGGGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: FMLRNKETALSPKGLLLKPKGLL*KEWGQR
Trigger: TCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGG...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGCAGAGAGAGTGATAATGCGCACAGAGTTCCTTTaGTGGCTTTTCTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: LVPKGSPLEGMGAERVIMRTEFL*WLFSSS
Trigger: ACTAGAAGAGAAAAGCCACAAAAGGAACTCTGTGCG...CATTATCACTCTCTCTGCCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp CTTCTCCCGGTTGTCGCTGAGCAGTGGGGTTATGGTGTACACCTTACAGAATGTCGCACAGAGTTCCTTTaGTGGCTTTTCTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: LLPVVAEQWGYGVHLTECRTEFL*WLFSSS
Trigger: ACTAGAAGAGAAAAGCCACAAAAGGAACTCTGTGCG...ACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574502.5
ENST00000576235.1
CDS-3UTR CAA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGTCTTGGTGGAGTTGTaGGTGACGTGGACATTTACA +
Preference number: 5 (lower is better)
Translates to: LRNKETALSPKGLLLKEWVLVEL*VTWTFT
Trigger: TGTAAATGTCCACGTCACCAACAACTCCACCAAGAC...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGATCTTCTTGACGGTCTaGGTGGAGTTGTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: FHCPLPENLGMNTACHPRIFLTV*VELLVT
Trigger: CGTCACCAACAACTCCACCAAGACCGTCAAGAAGAT...CCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGTGTCTCACAGAGACTTaGATCTTCTTGACGGTCTTG +
Preference number: 5 (lower is better)
Translates to: SLSPSRKFRYEHSLPPTACLTET*IFLTVL
Trigger: CAAGACCGTCAAGAAGATCAAAGTCTCTGTGAGACA...CGCCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp AGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGGGGTGTCTCACAGAGACTTaGATCTTCTTGACGGTCTTG +
Preference number: 5 (lower is better)
Translates to: RNKETALSPKGLLLKEWGCLTET*IFLTVL
Trigger: CAAGACCGTCAAGAAGATCAAAGTCTCTGTGAGACA...CCCCCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGTCAAATTCAATGAGGTaGGTGTCCACAGGGACATCT +
Preference number: 5 (lower is better)
Translates to: SLSPSRKFRYEHSLPPTASNSMR*VSTGTS
Trigger: AGATGTCCCTGTGGACACCAACCTCATTGAATTTGA...CGCCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp ACCCCGCTTCCTAGCAGAGTTGATCATCATAGTCGTCATCCTTCATCCCCTTCACGCTTCCTAGCAGAGTaGATCATCATAGTCGTCATC +
Preference number: 5 (lower is better)
Translates to: TPLPSRVDHHSRHPSSPSRFLAE*IIIVVI
Trigger: GATGACGACTATGATGATCAACTCTGCTAGGAAGCG...TGAAGGGGATGAAGGATGACGACTATGATGATCAACTCTGCTAGGAAGCGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGGAGAGTGTGAAGGGATaGGTTGAAGAAGCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: FHCPLPENLGMNTACHPRESVKG*VEEASR
Trigger: CCTGGAAGCTTCTTCAACCAATCCCTTCACACTCTC...CCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGTTGAGAGTAGGAGTTTaGTCTCCCCCTTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: FHCPLPENLGMNTACHPRLRVGV*SPPFPP
Trigger: AGGAGGGAAAGGGGGAGACAAAACTCCTACTCTCAA...CCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGAGATACCTGGTCATCTaGTTCGAGTTGAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: FMLRNKETALSPKGLLLKRYLVI*FELSHR
Trigger: CCTGTGGCTCAACTCGAACAAGATGACCAGGTATCT...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
CDS-3UTR CAA 90 bp CTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGAATGGTCAAATTCAATGAGGTaGGTGTCCACAGGGACATCT +
Preference number: 5 (lower is better)
Translates to: LRNKETALSPKGLLLKEWSNSMR*VSTGTS
Trigger: AGATGTCCCTGTGGACACCAACCTCATTGAATTTGA...CCATTCCTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTAACAAAGAAACGGCCTaGTCCCCAAAGGGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPNKETA*SPKGLL
Trigger: GAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTT...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTCACTGTCCCCTTCCAGAAAATTTAGGTATGAACACAGCTTGCCACCCACGGCGCACAGAGTTCCTTTaGTGGCTTTTCTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: FHCPLPENLGMNTACHPRRTEFL*WLFSSS
Trigger: ACTAGAAGAGAAAAGCCACAAAAGGAACTCTGTGCG...CCGTGGGTGGCAAGCTGTGTTCATACCTAAATTTTCTGGAAGGGGACAGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCACGGTCTTGGTGGAGTaGTTGGTGACGTGGACATTT +
Preference number: 5 (lower is better)
Translates to: FSSLCSETKKRPCPQRVSTVLVE*LVTWTF
Trigger: AAATGTCCACGTCACCAACAACTCCACCAAGACCGT...GGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTGAGACTTTGATCTTCTaGACGGTCTTGGTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SSLCSETKKRPCPQRVSSETLIF*TVLVEL
Trigger: CAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTC...AGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGGTCATCTTGTTCGAGTaGAGCCACAGGACACTTGTA +
Preference number: 5 (lower is better)
Translates to: FMLRNKETALSPKGLLLKVILFE*SHRTLV
Trigger: TACAAGTGTCCTGTGGCTCAACTCGAACAAGATGAC...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTCTTGAAGCGCTTCCTAGCAGAGTaGATCATCATAGTCGTCATC +
Preference number: 5 (lower is better)
Translates to: FMLRNKETALSPKGLLLKRFLAE*IIIVVI
Trigger: GATGACGACTATGATGATCAACTCTGCTAGGAAGCG...CTTCAAGAGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTTGAGAGTAGGAGTTTaGTCTCCCCCTTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: FSSLCSETKKRPCPQRVSLRVGV*SPPFPP
Trigger: AGGAGGGAAAGGGGGAGACAAAACTCCTACTCTCAA...GGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCGAGACTTTGATCTTCTaGACGGTCTTGGTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: FSSLCSETKKRPCPQRVSETLIF*TVLVEL
Trigger: CAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTC...GGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCCGCACAGAGTTCCTTTaGTGGCTTTTCTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: FSSLCSETKKRPCPQRVSRTEFL*WLFSSS
Trigger: ACTAGAAGAGAAAAGCCACAAAAGGAACTCTGTGCG...GGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp ATTTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCGAGACTTTGATCTTCTaGACGGTCTTGGTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: IFFFMLRNKETALSPKGLETLIF*TVLVEL
Trigger: CAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTC...GAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS-3UTR CAA 90 bp TTTCTTCTTTATGCTCAGAAACAAAGAAACGGCCTTGTCCCCAAAGGGTCTCCTTCAAATTCAATGAGGTaGGTGTCCACAGGGACATCT +
Preference number: 5 (lower is better)
Translates to: FLLYAQKQRNGLVPKGSPSNSMR*VSTGTS
Trigger: AGATGTCCCTGTGGACACCAACCTCATTGAATTTGA...AGGAGACCCTTTGGGGACAAGGCCGTTTCTTTGTTTCTGAGCATAAAGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000412477.7
ENST00000572457.5
ENST00000575877.5
CDS GCA 72 bp TACACGGTGAGCTGGTCCCGGGTTTCTCCCCCATGGTaGGCGCGCCCGCCGCCCGCTCGGTTCGCGGCTCGC +
Preference number: 6 (lower is better)
Translates to: YTVSWSRVSPPW*ARPPPARFAAR
Trigger: GCGAGCCGCGAACCGAGCGGGCGGCGGGCGCGCGCACCATGGGGGAGAAACCCGGGACCAGCTCACCGTGTA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000570739.5
ENST00000574954.5
ENST00000575131.5
CDS GCA 72 bp CTCGCTCGCAGCCTCCTCGCCCGCTGCCAAGATCCCTaGTCCTCCCCGCGCCAATGCGCACGCGCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: LARSLLARCQDP*SSPRQCARAPS
Trigger: GGAGGGCGCGCGTGCGCATTGGCGCGGGGAGGAGCAGGGATCTTGGCAGCGGGCGAGGAGGCTGCGAGCGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574502.5
CDS CAA 90 bp AGCTTGGGTTGGCTCCTAGGAGGGCTACAGGCACATGGCTTGCTTTaGGCCTCCTCCTCTGTGGTCTTGCTTGGGGACCCAAGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: SLGWLLGGLQAHGLL*ASSSVVLLGDPSLP
Trigger: GGGCAGGCTTGGGTCCCCAAGCAAGACCACAGAGGAGGAGGCCAAAAGCAAGCCATGTGCCTGTAGCCCTCCTAGGAGCCAACCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570718.5
ENST00000572497.5
CDS GCA 72 bp TTTCCCTGGGCCCCCTGGACTTGGGGCCAGTACCTTTaGGGTCCTTCAGGTAGTCAGGGTCCACAAGCACCA +
Preference number: 6 (lower is better)
Translates to: FPWAPWTWGQYL*GPSGSQGPQAP
Trigger: TGGTGCTTGTGGACCCTGACTACCTGAAGGACCGCAAAGGTACTGGCCCCAAGTCCAGGGGGCCCAGGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574888.5
CDS CAA 90 bp ACGGTGAGCTTGGGTTGGCTCCTAGGAGGGCTACAGGCACATGGCTaGCTTTTGGCCTCCTCCTCTGTGGTCTTGCTTGGGGACCCAAGC +
Preference number: 6 (lower is better)
Translates to: TVSLGWLLGGLQAHG*LLASSSVVLLGDPS
Trigger: GCTTGGGTCCCCAAGCAAGACCACAGAGGAGGAGGCCAAAAGCAAGCCATGTGCCTGTAGCCCTCCTAGGAGCCAACCCAAGCTCACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570718.5
ENST00000572497.5
CDS CCA 72 bp CATGGAAGATTCTGGGGTATGGTGAAGAAGAAGGGGTaGGCATGCTGGCCCAGCTTCCTCAGCAGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: HGRFWGMVKKKG*ACWPSFLSSRS
Trigger: GGACCGGCTGCTGAGGAAGCTGGGCCAGCATGCCCACCCCTTCTTCTTCACCATACCCCAGAATCTTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000381488.10
ENST00000570739.5
ENST00000571206.1
ENST00000571428.5
ENST00000572457.5
ENST00000574954.5
ENST00000575131.5
ENST00000575877.5
ENST00000576235.1
CDS CCA 72 bp CTCAAAACTGGCTGCCCTGCCCGGGGATCTCCAGGCTaGGCTATCAGGAAGGAGTTGTTCCAGGTTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LKTGCPARGSPG*AIRKELFQVSS
Trigger: GGAGGAAACCTGGAACAACTCCTTCCTGATAGCCCAGCCTGGAGATCCCCGGGCAGGGCAGCCAGTTTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS CCA 72 bp GAGCTTGGGTTGGCTCCTAGGAGGGCTACAGGCACATaGCTTGCTTTTGGCCTCCTCCTCTGTGGTCTTGCT +
Preference number: 6 (lower is better)
Translates to: ELGLAPRRATGT*LAFGLLLCGLA
Trigger: AGCAAGACCACAGAGGAGGAGGCCAAAAGCAAGCCATGTGCCTGTAGCCCTCCTAGGAGCCAACCCAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570718.5
ENST00000572497.5
CDS CCA 72 bp CTGTTCCTCCCGTACCTTTCCTGTATCCTCTGGGCCTaGCTGCAGTGTGACGGAGCATGGAAGATTCTGGGG +
Preference number: 6 (lower is better)
Translates to: LFLPYLSCILWA*LQCDGAWKILG
Trigger: CCCCAGAATCTTCCATGCTCCGTCACACTGCAGCCAGGCCCAGAGGATACAGGAAAGGTACGGGAGGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575131.5
CDS CAA 72 bp TTGGGTTGGCTCCTAGGAGGGCTACAGGCACATGGCTaGCTTTTGGCCTCCTCCTCTGTGGTCTTGCTTGGG +
Preference number: 6 (lower is better)
Translates to: LGWLLGGLQAHG*LLASSSVVLLG
Trigger: CCCAAGCAAGACCACAGAGGAGGAGGCCAAAAGCAAGCCATGTGCCTGTAGCCCTCCTAGGAGCCAACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570718.5
ENST00000572497.5
CDS CAA 72 bp TGCACACCTCTGCCCACCAGCCCGGTGTGTGTGTGTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTC +
Preference number: 6 (lower is better)
Translates to: CTPLPTSPVCVC*CVCVCVCVCVL
Trigger: GAGGACACACACACACACACACACACACACACACAAACACACACACACCGGGCTGGTGGGCAGAGGTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS GCA 72 bp CCCAGAGAGGAGGCAGATAATCAAGGGCTTCCTGAATaGACTGGGACCCTGAAGGGAAGTGGATCTAGGGTC +
Preference number: 6 (lower is better)
Translates to: PREEADNQGLPE*TGTLKGSGSRV
Trigger: GACCCTAGATCCACTTCCCTTCAGGGTCCCAGTGCATTCAGGAAGCCCTTGATTATCTGCCTCCTCTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571791.5
CDS CCA 72 bp GGCAGGGACTCTTGCCTCATTGTGGTCTCACGACCCTaGGGACTAAGTCTTCTTCCTCTCCAAAGCCCAGAA +
Preference number: 6 (lower is better)
Translates to: GRDSCLIVVSRP*GLSLLPLQSPE
Trigger: TTCTGGGCTTTGGAGAGGAAGAAGACTTAGTCCCCAGGGTCGTGAGACCACAATGAGGCAAGAGTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577054.1
CDS CAA 90 bp CTTTATCTCTGCACACCTCTGCCCACCAGCCCGGTGTGTGTGTGTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTCAGCCAACCA +
Preference number: 6 (lower is better)
Translates to: LYLCTPLPTSPVCVC*CVCVCVCVCVLSQP
Trigger: TGGTTGGCTGAGGACACACACACACACACACACACACACACACAAACACACACACACCGGGCTGGTGGGCAGAGGTGTGCAGAGATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS CAA 90 bp TCCAAACCCCACCTCCTACCAGAGACTTTGATCTTCTTGACGGTCTaGGTGGAGTTGTTGGTGACGTGGACATTTACATTGAGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: SKPHLLPETLIFLTV*VELLVTWTFTLRGS
Trigger: GGAGCCCCTCAATGTAAATGTCCACGTCACCAACAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTCTGGTAGGAGGTGGGGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573886.5
CDS CAA 72 bp TCCAAACCCCACCTCCTACCAGAGACTTTGATCTTCTaGACGGTCTTGGTGGAGTTGTTGGTGACGTGGACA +
Preference number: 6 (lower is better)
Translates to: SKPHLLPETLIF*TVLVELLVTWT
Trigger: TGTCCACGTCACCAACAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTCTGGTAGGAGGTGGGGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573886.5
CDS CAA 90 bp ATGTCGGCGTACTGTCTCACAGAGACTTTGATCTTCTTGACGGTCTaGGTGGAGTTGTTGGTGACGTGGACATTTACATTGAGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: MSAYCLTETLIFLTV*VELLVTWTFTLRGS
Trigger: GGAGCCCCTCAATGTAAATGTCCACGTCACCAACAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTCTGTGAGACAGTACGCCGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000381488.10
ENST00000412477.7
ENST00000571206.1
ENST00000571428.5
ENST00000572457.5
ENST00000574954.5
ENST00000575877.5
CDS CAA 72 bp GAGACTTTGATCTTCTTGACGGTCTTGGTGGAGTTGTaGGTGACGTGGACATTTACATTGAGGGGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: ETLIFLTVLVEL*VTWTFTLRGSP
Trigger: TGGGGAGCCCCTCAATGTAAATGTCCACGTCACCAACAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000381488.10
ENST00000412477.7
ENST00000571206.1
ENST00000571428.5
ENST00000572457.5
ENST00000573886.5
ENST00000574954.5
ENST00000575877.5
CDS CAA 72 bp ATGTCGGCGTACTGTCTCACAGAGACTTTGATCTTCTaGACGGTCTTGGTGGAGTTGTTGGTGACGTGGACA +
Preference number: 6 (lower is better)
Translates to: MSAYCLTETLIF*TVLVELLVTWT
Trigger: TGTCCACGTCACCAACAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTCTGTGAGACAGTACGCCGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000381488.10
ENST00000412477.7
ENST00000571206.1
ENST00000571428.5
ENST00000572457.5
ENST00000574954.5
ENST00000575877.5
CDS CAA 72 bp CCAGAGACTTTGATCTTCTTGACGGTCTTGGTGGAGTaGTTGGTGACGTGGACATTTACATTGAGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: PETLIFLTVLVE*LVTWTFTLRGS
Trigger: GGAGCCCCTCAATGTAAATGTCCACGTCACCAACAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573886.5
CDS CAA 72 bp CAGGAAGGAGTTGTTCCAGGTTTCCTCCCAATAGTGTaGGAAAGTGAGGGTGGTGGCGTTTCTCAGACTAGT +
Preference number: 6 (lower is better)
Translates to: QEGVVPGFLPIV*ESEGGGVSQTS
Trigger: ACTAGTCTGAGAAACGCCACCACCCTCACTTTCCAACACTATTGGGAGGAAACCTGGAACAACTCCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571206.1
CDS CAA 72 bp ACAGAGACTTTGATCTTCTTGACGGTCTTGGTGGAGTaGTTGGTGACGTGGACATTTACATTGAGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: TETLIFLTVLVE*LVTWTFTLRGS
Trigger: GGAGCCCCTCAATGTAAATGTCCACGTCACCAACAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000381488.10
ENST00000412477.7
ENST00000571206.1
ENST00000571428.5
ENST00000572457.5
ENST00000574954.5
ENST00000575877.5
CDS CAA 72 bp AAGTACACGGTGAGCTTGCAGTTAGGGCTCGACTTCTaGAAGACCCTAACAAAACAGAAAGGGAAACCCCAC +
Preference number: 6 (lower is better)
Translates to: KYTVSLQLGLDF*KTLTKQKGKPH
Trigger: GTGGGGTTTCCCTTTCTGTTTTGTTAGGGTCTTCAAGAAGTCGAGCCCTAACTGCAAGCTCACCGTGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572782.1
CDS CAA 72 bp CACCTCCTACCAGAGACTTTGATCTTCTTGACGGTCTaGGTGGAGTTGTTGGTGACGTGGACATTTACATTG +
Preference number: 6 (lower is better)
Translates to: HLLPETLIFLTV*VELLVTWTFTL
Trigger: CAATGTAAATGTCCACGTCACCAACAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTCTGGTAGGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573886.5
CDS CAA 72 bp TACTGTCTCACAGAGACTTTGATCTTCTTGACGGTCTaGGTGGAGTTGTTGGTGACGTGGACATTTACATTG +
Preference number: 6 (lower is better)
Translates to: YCLTETLIFLTV*VELLVTWTFTL
Trigger: CAATGTAAATGTCCACGTCACCAACAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTCTGTGAGACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269260.7
ENST00000346341.6
ENST00000381488.10
ENST00000412477.7
ENST00000571206.1
ENST00000571428.5
ENST00000572457.5
ENST00000574954.5
ENST00000575877.5