RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARPP21 (Homo sapiens)

Ensembl gene IDs: ENSG00000172995

Ensembl transcript IDs: ENST00000187397.8, ENST00000396481.6, ENST00000396482.6, ENST00000412048.5, ENST00000413378.5, ENST00000414496.5, ENST00000417925.5, ENST00000419330.5, ENST00000421492.5, ENST00000425289.5, ENST00000427542.5, ENST00000427590.1, ENST00000428373.5, ENST00000432450.5, ENST00000432682.5, ENST00000434383.6, ENST00000436702.5, ENST00000438071.1, ENST00000438577.5, ENST00000441454.5, ENST00000444190.5, ENST00000446068.6, ENST00000449196.5, ENST00000450234.5, ENST00000452563.5, ENST00000457165.5, ENST00000461826.1, ENST00000462173.1, ENST00000463970.5, ENST00000473138.1, ENST00000474696.5, ENST00000476327.1, ENST00000481854.1, ENST00000684406.1

Found 1118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCCTGGAGAGCCAGCTGCCACACCTGAGACTAGGGGTGTGCTCTaGAGAGGTGGATGGGTGCGGGACAGCGATCCTGAGGAGCCTGCA +
Preference number: 1 (lower is better)
Translates to: QPGEPAATPETRGVL*RGGWVRDSDPEEPA
Trigger: TGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATCCACCTCTCCAGAGCACACCCCTAGTCTCAGGTGTGGCAGCTGGCTCTCCAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR GCA 90 bp CTGCCACACCTGAGACTAGGGGTGTGCTCTGGAGAGGTGGATGGGTaGGGGACAGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGG +
Preference number: 1 (lower is better)
Translates to: LPHLRLGVCSGEVDG*GTAILRSLHCWKTR
Trigger: CCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATCCACCTCTCCAGAGCACACCCCTAGTCTCAGGTGTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR CCA 90 bp CCAGCTGCCACACCTGAGACTAGGGGTGTGCTCTGGAGAGGTGGATaGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTGCTGGAAGAC +
Preference number: 1 (lower is better)
Translates to: PAATPETRGVLWRGG*VRDSDPEEPALLED
Trigger: GTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATCCACCTCTCCAGAGCACACCCCTAGTCTCAGGTGTGGCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR CCA 90 bp CAGGCGGGATGCCTGTTGCAGCTTCAAGTGGAAGGAGGATGTAGCTaGTGCTGCTGGGAGCAACCTGGCCCCCTATTCCATTCTCTGGAT +
Preference number: 1 (lower is better)
Translates to: QAGCLLQLQVEGGCS*CCWEQPGPLFHSLD
Trigger: ATCCAGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCAGCACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACAGGCATCCCGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR GCA 90 bp GCCTGTGTGTGGATTAAGAAGGATGCTTCCAGGCGGGATGCCTGTTaGAGCTTCAAGTGGAAGGAGGATGTAGCTGGTGCTGCTGGGAGC +
Preference number: 1 (lower is better)
Translates to: ACVWIKKDASRRDAC*SFKWKEDVAGAAGS
Trigger: GCTCCCAGCAGCACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACAGGCATCCCGCCTGGAAGCATCCTTCTTAATCCACACACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR GCA 90 bp GGATGCCTGTTGCAGCTTCAAGTGGAAGGAGGATGTAGCTGGTGCTaGTGGGAGCAACCTGGCCCCCTATTCCATTCTCTGGATAAGGCA +
Preference number: 1 (lower is better)
Translates to: GCLLQLQVEGGCSWC*WEQPGPLFHSLDKA
Trigger: TGCCTTATCCAGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCAGCACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACAGGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR CCA 90 bp TGCCTGTTGCAGCTTCAAGTGGAAGGAGGATGTAGCTGGTGCTGCTaGGAGCAACCTGGCCCCCTATTCCATTCTCTGGATAAGGCACAC +
Preference number: 1 (lower is better)
Translates to: CLLQLQVEGGCSWCC*EQPGPLFHSLDKAH
Trigger: GTGTGCCTTATCCAGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCAGCACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR TCA 90 bp CCAACCAGCATTGCTCATACTTGCACAGTTTGTTCTGCAGCTAGCTaGCATCACTGGGACAGTGCTGGAGGGGCAGTGTGGGCCAATCAG +
Preference number: 1 (lower is better)
Translates to: PTSIAHTCTVCSAAS*HHWDSAGGAVWANQ
Trigger: CTGATTGGCCCACACTGCCCCTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR TCA 90 bp AGCGTTGTACTGAACCGGGGCCATGGGCCGGTACTGTTGCGTGGTTaGGGTAGGGTACTGACCAGATGGGTAATAATATACAGGCATCTG +
Preference number: 1 (lower is better)
Translates to: SVVLNRGHGPVLLRG*GRVLTRWVIIYRHL
Trigger: CAGATGCCTGTATATTATTACCCATCTGGTCAGTACCCTACCTCAACCACGCAACAGTACCGGCCCATGGCCCCGGTTCAGTACAACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR GCA 90 bp CAACCCCCTGCTCCCACCACTCCTCAGCCAATCCAAAGAGAGGCTTaGAGGCTCTCATTCTCTCCTACAAAGCTAGTCTTGGTTTCTGAG +
Preference number: 1 (lower is better)
Translates to: QPPAPTTPQPIQREA*RLSFSPTKLVLVSE
Trigger: CTCAGAAACCAAGACTAGCTTTGTAGGAGAGAATGAGAGCCTGCAAGCCTCTCTTTGGATTGGCTGAGGAGTGGTGGGAGCAGGGGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR TCA 90 bp GGCTTGCAGGCTCTCATTCTCTCCTACAAAGCTAGTCTTGGTTTCTaGGCTTGGAACCAGCAGGAACAAAGCACCATTTACACCTTATTT +
Preference number: 1 (lower is better)
Translates to: GLQALILSYKASLGF*AWNQQEQSTIYTLF
Trigger: AAATAAGGTGTAAATGGTGCTTTGTTCCTGCTGGTTCCAAGCTCAGAAACCAAGACTAGCTTTGTAGGAGAGAATGAGAGCCTGCAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR GCA 90 bp GCTTGGAACCAGCAGGAACAAAGCACCATTTACACCTTATTTCTCTaGACCAATTGTATGGATACACTAGACTTAGGTCCAGAGTGGGCA +
Preference number: 1 (lower is better)
Translates to: AWNQQEQSTIYTLFL*TNCMDTLDLGPEWA
Trigger: TGCCCACTCTGGACCTAAGTCTAGTGTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGCTGGTTCCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR CCA 90 bp GGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTCTaGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATG +
Preference number: 1 (lower is better)
Translates to: GSDTIHILYTSASVL*DSVRTFCKCRWYLM
Trigger: CATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR GCA 90 bp ACATCTGCCAGTGTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTaGCGGTGGTACCTAATGAAGGCATTGCATATAAACTCAAAAGTC +
Preference number: 1 (lower is better)
Translates to: TSASVLWDSVRTFCK*RWYLMKALHINSKV
Trigger: GACTTTTGAGTTTATATGCAATGCCTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAACACTGGCAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR GCA 90 bp ATATCTGAAGAAATGTACCACAGCCAGAGCTCTCAGAATTTGACCTaGCAACCAGCATTGCTCATACTTGCACAGTTTGTTCTGCAGCTA +
Preference number: 1 (lower is better)
Translates to: ISEEMYHSQSSQNLT*QPALLILAQFVLQL
Trigger: TAGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTGGCTGTGGTACATTTCTTCAGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR CCA 90 bp GCCAGTGTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTaGTACCTAATGAAGGCATTGCATATAAACTCAAAAGTCTGTTTC +
Preference number: 1 (lower is better)
Translates to: ASVLWDSVRTFCKCR*YLMKALHINSKVCF
Trigger: GAAACAGACTTTTGAGTTTATATGCAATGCCTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAACACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR TCA 90 bp TGGGAGCAAACTGAATCGTGTGCAAATATTCTCTCCCTCACTCTCTaGTATTCCTCTTCTCTCTCTTCAATTGATTTACTTCGTCTGTCA +
Preference number: 1 (lower is better)
Translates to: WEQTESCANILSLTL*YSSSLSSIDLLRLS
Trigger: TGACAGACGAAGTAAATCAATTGAAGAGAGAGAAGAGGAATATCAGAGAGTGAGGGAGAGAATATTTGCACACGATTCAGTTTGCTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446068.6
3UTR TCA 90 bp TATTCTCTCCCTCACTCTCTGATATTCCTCTTCTCTCTCTTCAATTaGTTTACTTCGTCTGTCATCTCTAAATGGATGCATTCTGTTTTG +
Preference number: 1 (lower is better)
Translates to: YSLPHSLIFLFSLFN*FTSSVISKWMHSVL
Trigger: CAAAACAGAATGCATCCATTTAGAGATGACAGACGAAGTAAATCAATTGAAGAGAGAGAAGAGGAATATCAGAGAGTGAGGGAGAGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446068.6
3UTR-3UTR TCA 90 bp GCCCCCTATTCCATTCTCTGGATAAGGCACACAGCCTGGAGAGCCAGCTGCCACCCCTGGTCAGCACCGTaGTGCCCCCAAAACTCGCCG +
Preference number: 2 (lower is better)
Translates to: APYSILWIRHTAWRASCHPWSAP*CPQNSP
Trigger: CGGCGAGTTTTGGGGGCATCACGGTGCTGACCAGGG...GTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR-3UTR CCA 90 bp ACTCCTCTGAGCGTTGTACTGAACCGGGGCCATGGGCCGGTACTGTTGCGTGGTAGGCGATTACATAGCTaGGCTGCTGGGCCGGCTGTG +
Preference number: 2 (lower is better)
Translates to: TPLSVVLNRGHGPVLLRGRRLHS*AAGPAV
Trigger: CACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCT...ACCACGCAACAGTACCGGCCCATGGCCCCGGTTCAGTACAACGCTCAGAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR TCA 90 bp ACTCCTCTGAGCGTTGTACTGAACCGGGGCCATGGGCCGGTACTGTTGCGTGGTTGGGTAGACAGGACCTaGTGGGGGTTCAGGAGTCTC +
Preference number: 2 (lower is better)
Translates to: TPLSVVLNRGHGPVLLRGWVDRT*WGFRSL
Trigger: GAGACTCCTGAACCCCCATCAGGTCCTGTCTACCCA...ACCACGCAACAGTACCGGCCCATGGCCCCGGTTCAGTACAACGCTCAGAGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR CCA 90 bp GAGCCAGCTGCCACACCTGAGACTAGGGGTGTGCTCTGGAGAGGTGGATGGGTGAGGAGCCTGCACTGCTaGAAGACTCGGAACTACCTG +
Preference number: 2 (lower is better)
Translates to: EPAATPETRGVLWRGGWVRSLHC*KTRNYL
Trigger: CAGGTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCT...CACCCATCCACCTCTCCAGAGCACACCCCTAGTCTCAGGTGTGGCAGCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR-3UTR GCA 90 bp AAGGGCTGGCCTGTGTGTGGATTAAGAAGGATGCTTCCAGGCGGGATGCCTGTTGGATGTAGCTGGTGCTaGTGGGAGCAACCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: KGWPVCGLRRMLPGGMPVGCSWC*WEQPGP
Trigger: GGGGCCAGGTTGCTCCCAGCAGCACCAGCTACATCC...AACAGGCATCCCGCCTGGAAGCATCCTTCTTAATCCACACACAGGCCAGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR-3UTR CCA 90 bp CCCTATTCCATTCTCTGGATAAGGCACACAGCCTGGAGAGCCAGCTGCCACACCTGTGCTCTGGAGAGGTaGATGGGTGCGGGACAGCGA +
Preference number: 2 (lower is better)
Translates to: PYSILWIRHTAWRASCHTCALER*MGAGQR
Trigger: TCGCTGTCCCGCACCCATCCACCTCTCCAGAGCACA...GGTGTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR-3UTR GCA 90 bp GAGCAACCTGGCCCCCTATTCCATTCTCTGGATAAGGCACACAGCCTGGAGAGCCTGAGGAGCCTGCACTaGTGGAAGACTCGGAACTAC +
Preference number: 2 (lower is better)
Translates to: EQPGPLFHSLDKAHSLESLRSLH*WKTRNY
Trigger: GTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAG...GCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGGGGCCAGGTTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR-3UTR GCA 90 bp TCTGACTCTGAGGTGGCTGCTGCACTCCTATTAGGCCTTGGAATCCCTGTTGACGACTGGCTGGTAACCTaGTTGCTGTGCTGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: SDSEVAAALLLGLGIPVDDWLVT*LLCCLW
Trigger: CCACAGGCAGCACAGCAAGCAGGTTACCAGCCAGTC...GTCAACAGGGATTCCAAGGCCTAATAGGAGTGCAGCAGCCACCTCAGAGTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR GCA 90 bp AAGGGCTGGCCTGTGTGTGGATTAAGAAGGATGCTTCCAGGCGGGATGCCTGTTAGACTCGGAACTACCTaGTTTGGACAGCTTCCCGGT +
Preference number: 2 (lower is better)
Translates to: KGWPVCGLRRMLPGGMPVRLGTT*FGQLPG
Trigger: ACCGGGAAGCTGTCCAAAGCAGGTAGTTCCGAGTCT...AACAGGCATCCCGCCTGGAAGCATCCTTCTTAATCCACACACAGGCCAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR-3UTR GCA 90 bp AATTTGACCTGCCAACCAGCATTGCTCATACTTGCACAGTTTGTTCTGCAGCTAGTCTCCCCCGAGGACTaGCGGCTCAGGGTCATCTGG +
Preference number: 2 (lower is better)
Translates to: NLTCQPALLILAQFVLQLVSPED*RLRVIW
Trigger: CCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGAC...TAGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR CCA 90 bp ACTCCTCTGAGCGTTGTACTGAACCGGGGCCATGGGCCGGTACTGTTGCGTGGTAGGGTACTGACCAGATaGGTAATAATATACAGGCAT +
Preference number: 2 (lower is better)
Translates to: TPLSVVLNRGHGPVLLRGRVLTR*VIIYRH
Trigger: ATGCCTGTATATTATTACCCATCTGGTCAGTACCCT...ACCACGCAACAGTACCGGCCCATGGCCCCGGTTCAGTACAACGCTCAGAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR CCA 90 bp AATTTGACCTGCCAACCAGCATTGCTCATACTTGCACAGTTTGTTCTGCAGCTAACTGAACCGGGGCCATaGGCCGGTACTGTTGCGTGG +
Preference number: 2 (lower is better)
Translates to: NLTCQPALLILAQFVLQLTEPGP*AGTVAW
Trigger: CCACGCAACAGTACCGGCCCATGGCCCCGGTTCAGT...TAGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR GCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGTTTCTATCAACCCCCTaGTCCCACCACTCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKFLSTP*SHHSSA
Trigger: GGCTGAGGAGTGGTGGGAGCAGGGGGTTGATAGAAA...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR GCA 90 bp AGACATTGTTGGGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTTGGTTCCTCCTGTAGGAAGCTaGTGGCCTGTAGAGGCGATT +
Preference number: 2 (lower is better)
Translates to: RHCWVGNHHALHRSSLLVPPVGS*WPVEAI
Trigger: AATCGCCTCTACAGGCCAGCAGCTTCCTACAGGAGG...AACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACCCAACAATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR GCA 90 bp ATACTTGCACAGTTTGTTCTGCAGCTAGCTGACATCACTGGGACAGTGCTGGAGATATACAGGCATCTGTaGAGGCGGAGGCTGTTGCAC +
Preference number: 2 (lower is better)
Translates to: ILAQFVLQLADITGTVLEIYRHL*RRRLLH
Trigger: GTGCAACAGCCTCCGCCTGCACAGATGCCTGTATAT...CTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR CCA 90 bp CACAGCCAGAGCTCTCAGAATTTGACCTGCCAACCAGCATTGCTCATACTTGCACCTGTAGGAAGCTGCTaGCCTGTAGAGGCGATTACA +
Preference number: 2 (lower is better)
Translates to: HSQSSQNLTCQPALLILAPVGSC*PVEAIT
Trigger: TGTAATCGCCTCTACAGGCCAGCAGCTTCCTACAGG...TGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR CAA 90 bp CATTGTTGGGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTaGGTTATTTATCACGTTCTGACTCTGAGGTGGCTGCTGCACTCC +
Preference number: 2 (lower is better)
Translates to: HCWVGNHHALHRSSL*VIYHVLTLRWLLHS
Trigger: GGAGTGCAGCAGCCACCTCAGAGTCAGAACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACCCAACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR TCA 90 bp GGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTTGGTTATTTATCACGTCCTTGGAATCCCTGTTaGCCAGACAAGACTGGCTGG +
Preference number: 2 (lower is better)
Translates to: GRKPSRFAPEFLVGYLSRPWNPC*PDKTGW
Trigger: CCAGCCAGTCTTGTCTGGTCAACAGGGATTCCAAGG...ACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR CCA 90 bp GGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTTGGTTATTTATCACGTCGGCTCAGGGTCATCTaGCCAAACTGTGTTGCCACA +
Preference number: 2 (lower is better)
Translates to: GRKPSRFAPEFLVGYLSRRLRVI*PNCVAT
Trigger: TGTGGCAACACAGTTTGGCCAGATGACCCTGAGCCG...ACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR CAA 90 bp AGACATTGTTGGGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTaGTTGGTTATTTATCACGTTCTGACTCTGAGGTGGCTGCTGCAC +
Preference number: 2 (lower is better)
Translates to: RHCWVGNHHALHRSS*LVIYHVLTLRWLLH
Trigger: GTGCAGCAGCCACCTCAGAGTCAGAACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACCCAACAATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR CAA 90 bp ATGTACCACAGCCAGAGCTCTCAGAATTTGACCTGCCAACCAGCATaGCTCATACTTGCACAGTTTGTTCTGCAGCTAGCTGACATCACT +
Preference number: 2 (lower is better)
Translates to: MYHSQSSQNLTCQPA*LILAQFVLQLADIT
Trigger: AGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTGGCTGTGGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR TCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGCATAGTAATGGCCACTaGAAGATAGCCTGTCCATGC +
Preference number: 2 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKHSNGH*KIACPC
Trigger: GCATGGACAGGCTATCTTTCAGTGGCCATTACTATG...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR GCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTAAGGCTGTCCTTCTCTaGCTGGCATTAGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSKAVLL*LALGVG
Trigger: CCCCACTCCTAATGCCAGGCAGAGAAGGACAGCCTT...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGTAACCTGCTTGCTGTaGTGCCTGTGGCATCTGTTG +
Preference number: 2 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARVTCLL*CLWHLL
Trigger: CAACAGATGCCACAGGCAGCACAGCAAGCAGGTTAC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR CAA 90 bp TGGCACCTGATAAGAAGACATTGTTGGGTAGGAAACCATCACGCTTaGCACCGGAGTTCCTTGTTGGTTATTTATCACGTTCTGACTCTG +
Preference number: 2 (lower is better)
Translates to: WHLIRRHCWVGNHHA*HRSSLLVIYHVLTL
Trigger: CAGAGTCAGAACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACCCAACAATGTCTTCTTATCAGGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR TCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGCAACTTTTGCAGTATTaGGAAATCTCCACCAAAGCC +
Preference number: 2 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKQLLQY*EISTKA
Trigger: GGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTG...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR TCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATCATAGTAATGGCCACTaGAAGATAGCCTGTCCATGC +
Preference number: 2 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYHSNGH*KIACPC
Trigger: GCATGGACAGGCTATCTTTCAGTGGCCATTACTATG...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR GCA 90 bp ATACTTGCACAGTTTGTTCTGCAGCTAGCTGACATCACTGGGACAGTGCTGGAGGACATGACAGAAATATaGACCATTAACCAGCTAACG +
Preference number: 2 (lower is better)
Translates to: ILAQFVLQLADITGTVLEDMTEI*TINQLT
Trigger: CGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTC...CTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR CCA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGGAGTGGGGGACAACTaGGGCATTACTTCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPGVGDN*GITSPR
Trigger: CCTGGGAGAAGTAATGCCCCAGTTGTCCCCCACTCC...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR CAA 90 bp CCAGCAGGAACAAAGCACCATTTACACCTTATTTCTCTGCACCAATaGTATGGATACACTAGACTTAGGTCCAGAGTGGGCACTGTGATA +
Preference number: 2 (lower is better)
Translates to: PAGTKHHLHLISLHQ*YGYTRLRSRVGTVI
Trigger: TATCACAGTGCCCACTCTGGACCTAAGTCTAGTGTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR GCA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAAAGGCTGTCCTTCTCTaGCTGGCATTAGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPKAVLL*LALGVG
Trigger: CCCCACTCCTAATGCCAGGCAGAGAAGGACAGCCTT...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR CAA 90 bp GAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTaGGGATTATATTTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAG +
Preference number: 2 (lower is better)
Translates to: ELRGKTSPTRKERGY*GLYLVQPYQKRAFE
Trigger: CTCAAAGGCTCTCTTTTGATAAGGCTGAACCAAATATAATCCCAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
3UTR-3UTR GCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTGGTAGCACGGCCACTTaGTTATATGTGTGTCTGGAT +
Preference number: 2 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSGSTAT*LYVCLD
Trigger: ATCCAGACACACATATAAGCAAGTGGCCGTGCTACC...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAAGAACCCTGGGTCATTaGCACCTGATAAGAAGACAT +
Preference number: 2 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARRTLGH*HLIRRH
Trigger: ATGTCTTCTTATCAGGTGCCAATGACCCAGGGTTCT...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR TCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGACATTTGAGTGTTGAGTaGATACTTAAGTCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARHLSVE*ILKSSA
Trigger: GGCTGAGGACTTAAGTATTCACTCAACACTCAAATG...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
3UTR-3UTR TCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATTCAAAAGAGAGCCTTTaGGGAAAATTCAGCACTACT +
Preference number: 2 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYSKESL*GKFSTT
Trigger: AGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGA...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR TCA 90 bp GTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAGAGTATTTCAATTAAATGCATTTTGGGGAGCTaGGAGGTAAGACATCTCCAA +
Preference number: 2 (lower is better)
Translates to: VLSMLSVSMRGIQSISIKCILGS*EVRHLQ
Trigger: TTGGAGATGTCTTACCTCTCAGCTCCCCAAAATGCA...TTTAATTGAAATACTCTGAATTCCCCTCATGGAAACAGAGAGCATTGAGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
3UTR-3UTR GCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGTACACCTTATTTCTCTaGACCAATTGTATGGATACA +
Preference number: 2 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKYTLFL*TNCMDT
Trigger: TGTATCCATACAATTGGTGCAGAGAAATAAGGTGTA...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR CCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAATTTTCCCTCCCCTaGGCTCAGGTAAACCATTTT +
Preference number: 2 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIQFSLP*AQVNHF
Trigger: AAAATGGTTTACCTGAGCCCAGGGGAGGGAAAATTG...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR TCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCCAACTTTTGCAGTATTaGGAAATCTCCACCAAAGCC +
Preference number: 2 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCQLLQY*EISTKA
Trigger: GGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTG...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR TCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCATTTTACTTTTGTCTTaGCTGCACCCAGCCTCTGAT +
Preference number: 2 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCILLLS*LHPASD
Trigger: ATCAGAGGCTGGGTGCAGTCAAGACAAAAGTAAAAT...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR TCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCATTTTACTTTTGTCTTaGCTGCACCCAGCCTCTGAT +
Preference number: 2 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVILLLS*LHPASD
Trigger: ATCAGAGGCTGGGTGCAGTCAAGACAAAAGTAAAAT...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR TCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTTGCTCTCTGTTTCCATaGGGGGAATTCAGAGTATTT +
Preference number: 2 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSCSLFP*GEFRVF
Trigger: AAATACTCTGAATTCCCCTCATGGAAACAGAGAGCA...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR TCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCTGCTCTCTGTTTCCATaGGGGGAATTCAGAGTATTT +
Preference number: 2 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVCSLFP*GEFRVF
Trigger: AAATACTCTGAATTCCCCTCATGGAAACAGAGAGCA...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACCTGCCAACCAGCATTaGTCATACTTGCACAGTTTG +
Preference number: 2 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLPANQH*SYLHSL
Trigger: CAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAATAAGAAGACATTGTTaGGTAGGAAACCATCACGCT +
Preference number: 2 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARIRRHC*VGNHHA
Trigger: AGCGTGATGGTTTCCTACCCAACAATGTCTTCTTAT...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR TCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTCATTTGAGTGTTGAGTaGATACTTAAGTCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAHLSVE*ILKSSA
Trigger: GGCTGAGGACTTAAGTATTCACTCAACACTCAAATG...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
3UTR-3UTR TCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTTCAAAAGAGAGCCTTTaGGGAAAATTCAGCACTACT +
Preference number: 2 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSSKESL*GKFSTT
Trigger: AGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGA...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR TCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTTCAAAAGAGAGCCTTTaGGGAAAATTCAGCACTACT +
Preference number: 2 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGISKESL*GKFSTT
Trigger: AGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGA...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR TCA 90 bp GTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAGAGTATTTCAATTAAAATTTTACTTTTGTCTTaGCTGCACCCAGCCTCTGAT +
Preference number: 2 (lower is better)
Translates to: VLSMLSVSMRGIQSISIKILLLS*LHPASD
Trigger: ATCAGAGGCTGGGTGCAGTCAAGACAAAAGTAAAAT...TTTAATTGAAATACTCTGAATTCCCCTCATGGAAACAGAGAGCATTGAGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
3UTR-3UTR GCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTTACTTTTGTCTTGACTaGACCCAGCCTCTGATAAAA +
Preference number: 2 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIYFCLD*TQPLIK
Trigger: TTTTATCAGAGGCTGGGTGCAGTCAAGACAAAAGTA...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR GCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCTACTTTTGTCTTGACTaGACCCAGCCTCTGATAAAA +
Preference number: 2 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVYFCLD*TQPLIK
Trigger: TTTTATCAGAGGCTGGGTGCAGTCAAGACAAAAGTA...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR CCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTAGGAGAGAGGATACTTaGGATTATATTTGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSRREDT*DYIWFS
Trigger: GCTGAACCAAATATAATCCCAAGTATCCTCTCTCCT...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR CCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCAGGAGAGAGGATACTTaGGATTATATTTGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCRREDT*DYIWFS
Trigger: GCTGAACCAAATATAATCCCAAGTATCCTCTCTCCT...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR CCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTAGGAGAGAGGATACTTaGGATTATATTTGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIRREDT*DYIWFS
Trigger: GCTGAACCAAATATAATCCCAAGTATCCTCTCTCCT...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR TCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACATTTGAGTGTTGAGTaGATACTTAAGTCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLHLSVE*ILKSSA
Trigger: GGCTGAGGACTTAAGTATTCACTCAACACTCAAATG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
3UTR-3UTR TCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTCCAGCAGCAATCATTTaGGTGTTGAGTGAATACTTA +
Preference number: 2 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAPAAII*VLSEYL
Trigger: TAAGTATTCACTCAACACTCAAATGATTGCTGCTGG...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
3UTR-3UTR TCA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCACAACTTTTGCAGTATTaGGAAATCTCCACCAAAGCC +
Preference number: 2 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPQLLQY*EISTKA
Trigger: GGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTG...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR TCA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCATGCTCTCTGTTTCCATaGGGGGAATTCAGAGTATTT +
Preference number: 2 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPCSLFP*GEFRVF
Trigger: AAATACTCTGAATTCCCCTCATGGAAACAGAGAGCA...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR GCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCCAGGGTCTGTCATTCTaGAGAGTTAACATATATTGT +
Preference number: 2 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCQGLSF*RVNIYC
Trigger: ACAATATATGTTAACTCTGCAGAATGACAGACCCTG...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAAGCATTGCTCATACTTaGACAGTTTGTTCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLSIAHT*TVCSAA
Trigger: AGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR TCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACCAGCAGCAATCATTTaGGTGTTGAGTGAATACTTA +
Preference number: 2 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLPAAII*VLSEYL
Trigger: TAAGTATTCACTCAACACTCAAATGATTGCTGCTGG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
3UTR-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAGACATGACAGAAATATaGACCATTAACCAGCTAACG +
Preference number: 2 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLDMTEI*TINQLT
Trigger: CGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTC...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
3UTR-3UTR GCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTTTTCTGGACAACTTTTaGAGTATTGAGAAATCTCCA +
Preference number: 2 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSFLDNF*SIEKSP
Trigger: TGGAGATTTCTCAATACTGCAAAAGTTGTCCAGAAA...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR TCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTTCAAAAGAGAGCCTTTaGGGAAAATTCAGCACTACT +
Preference number: 2 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPSKESL*GKFSTT
Trigger: AGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGA...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
3UTR-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGACATGACAGAAATATaGACCATTAACCAGCTAACG +
Preference number: 2 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVDMTEI*TINQLT
Trigger: CGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
3UTR-3UTR CCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTAGGAGAGAGGATACTTaGGATTATATTTGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPRREDT*DYIWFS
Trigger: GCTGAACCAAATATAATCCCAAGTATCCTCTCTCCT...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
3UTR-3UTR GCA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCATTTCTGGACAACTTTTaGAGTATTGAGAAATCTCCA +
Preference number: 2 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPFLDNF*SIEKSP
Trigger: TGGAGATTTCTCAATACTGCAAAAGTTGTCCAGAAA...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR GCA 72 bp GGACCTGATGGGGGTTCAGGAGTCTCCCCCGAGGACTaGCGGCTCAGGGTCATCTGGCCAAACTGTGTTGCC +
Preference number: 3 (lower is better)
Translates to: GPDGGSGVSPED*RLRVIWPNCVA
Trigger: GGCAACACAGTTTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR CCA 72 bp GCTGCTGGGAGCAACCTGGCCCCCTATTCCATTCTCTaGATAAGGCACACAGCCTGGAGAGCCAGCTGCCAC +
Preference number: 3 (lower is better)
Translates to: AAGSNLAPYSIL*IRHTAWRASCH
Trigger: GTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR GCA 72 bp GATGGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTaGTGGAAGACTCGGAACTACCTGCTTTGGACAGCT +
Preference number: 3 (lower is better)
Translates to: DGCGTAILRSLH*WKTRNYLLWTA
Trigger: AGCTGTCCAAAGCAGGTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR GCA 72 bp TTGCAGCTTCAAGTGGAAGGAGGATGTAGCTGGTGCTaGTGGGAGCAACCTGGCCCCCTATTCCATTCTCTG +
Preference number: 3 (lower is better)
Translates to: LQLQVEGGCSWC*WEQPGPLFHSL
Trigger: CAGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCAGCACCAGCTACATCCTCCTTCCACTTGAAGCTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR TCA 72 bp CTGAACCGGGGCCATGGGCCGGTACTGTTGCGTGGTTaGGGTAGGGTACTGACCAGATGGGTAATAATATAC +
Preference number: 3 (lower is better)
Translates to: LNRGHGPVLLRG*GRVLTRWVIIY
Trigger: GTATATTATTACCCATCTGGTCAGTACCCTACCTCAACCACGCAACAGTACCGGCCCATGGCCCCGGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR TCA 72 bp ATTGCTCATACTTGCACAGTTTGTTCTGCAGCTAGCTaGCATCACTGGGACAGTGCTGGAGGGGCAGTGTGG +
Preference number: 3 (lower is better)
Translates to: IAHTCTVCSAAS*HHWDSAGGAVW
Trigger: CCACACTGCCCCTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTATGAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR GCA 72 bp GCTCCCACCACTCCTCAGCCAATCCAAAGAGAGGCTTaGAGGCTCTCATTCTCTCCTACAAAGCTAGTCTTG +
Preference number: 3 (lower is better)
Translates to: APTTPQPIQREA*RLSFSPTKLVL
Trigger: CAAGACTAGCTTTGTAGGAGAGAATGAGAGCCTGCAAGCCTCTCTTTGGATTGGCTGAGGAGTGGTGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR GCA 72 bp TGGATTAAGAAGGATGCTTCCAGGCGGGATGCCTGTTaGAGCTTCAAGTGGAAGGAGGATGTAGCTGGTGCT +
Preference number: 3 (lower is better)
Translates to: WIKKDASRRDAC*SFKWKEDVAGA
Trigger: AGCACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACAGGCATCCCGCCTGGAAGCATCCTTCTTAATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR-3UTR CAA 90 bp TTGTATATTGCAGGAGTTCCATCGGGATTCACAAAGGGCTGGCCTGTGTGTGGATCGGAACTACCTGCTTaGGACAGCTTCCCGGTACTC +
Preference number: 3 (lower is better)
Translates to: LYIAGVPSGFTKGWPVCGSELPA*DSFPVL
Trigger: GAGTACCGGGAAGCTGTCCAAAGCAGGTAGTTCCGA...TCCACACACAGGCCAGCCCTTTGTGAATCCCGATGGAACTCCTGCAATATACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
3UTR-3UTR CAA 90 bp ATACTTGCACAGTTTGTTCTGCAGCTAGCTGACATCACTGGGACAGTGCTGGAGGCCAGTTTTCCCACCTaGTTCCTCTTCCATCAAAGG +
Preference number: 3 (lower is better)
Translates to: ILAQFVLQLADITGTVLEASFPT*FLFHQR
Trigger: CCTTTGATGGAAGAGGAACAAGGTGGGAAAACTGGC...CTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR-3UTR CAA 90 bp CACAGCCAGAGCTCTCAGAATTTGACCTGCCAACCAGCATTGCTCATACTTGCAGAGAACCCTGGGTCATaGGCACCTGATAAGAAGACA +
Preference number: 3 (lower is better)
Translates to: HSQSSQNLTCQPALLILAENPGS*APDKKT
Trigger: TGTCTTCTTATCAGGTGCCAATGACCCAGGGTTCTC...TGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR GCA 72 bp CTTATATGTGTGTCTGGATGTTTTCTATCAACCCCCTaGTCCCACCACTCCTCAGCCAATCCAAAGAGAGGC +
Preference number: 3 (lower is better)
Translates to: LICVSGCFLSTP*SHHSSANPKRG
Trigger: GCCTCTCTTTGGATTGGCTGAGGAGTGGTGGGAGCAGGGGGTTGATAGAAAACATCCAGACACACATATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR CCA 72 bp ACAATCCATATACTGTATACATCTGCCAGTGTTCTCTaGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGG +
Preference number: 3 (lower is better)
Translates to: TIHILYTSASVL*DSVRTFCKCRW
Trigger: CCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAACACTGGCAGATGTATACAGTATATGGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR CAA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGATCAAAAGAGAGCCTTaGAGGAAAATTCAGCACTAC +
Preference number: 3 (lower is better)
Translates to: FGELRGKTSPTRKERGYLIKREP*RKIQHY
Trigger: GTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGAT...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
3UTR GCA 72 bp AGTGTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTaGCGGTGGTACCTAATGAAGGCATTGCATATAAAC +
Preference number: 3 (lower is better)
Translates to: SVLWDSVRTFCK*RWYLMKALHIN
Trigger: GTTTATATGCAATGCCTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR GCA 72 bp TTGGGGAAGCGATACAATCCATATACTGTATACATCTaGCAGTGTTCTCTGGGATTCAGTCCGCACATTTTG +
Preference number: 3 (lower is better)
Translates to: LGKRYNPYTVYI*QCSLGFSPHIL
Trigger: CAAAATGTGCGGACTGAATCCCAGAGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR CCA 72 bp TCCAAGAGCCTACTGTTTTCCACAAAAAGGCTTTCCTaGGAGCAAACTGAATCGTGTGCAAATATTCTCTCC +
Preference number: 3 (lower is better)
Translates to: SKSLLFSTKRLS*EQTESCANILS
Trigger: GGAGAGAATATTTGCACACGATTCAGTTTGCTCCCAGGAAAGCCTTTTTGTGGAAAACAGTAGGCTCTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446068.6
3UTR-3UTR CAA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGCCAGTTTTCCCACCTaGTTCCTCTTCCATCAAAGG +
Preference number: 3 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAASFPT*FLFHQR
Trigger: CCTTTGATGGAAGAGGAACAAGGTGGGAAAACTGGC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
3UTR CCA 72 bp CTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTaGTACCTAATGAAGGCATTGCATATAAACTCAAAA +
Preference number: 3 (lower is better)
Translates to: LWDSVRTFCKCR*YLMKALHINSK
Trigger: TTTTGAGTTTATATGCAATGCCTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR CAA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTTTTCCTCCTGGTACCTaGTCAAATGGGACAAAAAGC +
Preference number: 3 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSFPPGT*SNGTKS
Trigger: GCTTTTTGTCCCATTTGACAAGGTACCAGGAGGAAA...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR CAA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGACCTGATAAGAAGACATaGTTGGGTAGGAAACCATCA +
Preference number: 3 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARPDKKT*LGRKPS
Trigger: TGATGGTTTCCTACCCAACAATGTCTTCTTATCAGG...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR GCA 72 bp CAGCAGGAACAAAGCACCATTTACACCTTATTTCTCTaGACCAATTGTATGGATACACTAGACTTAGGTCCA +
Preference number: 3 (lower is better)
Translates to: QQEQSTIYTLFL*TNCMDTLDLGP
Trigger: TGGACCTAAGTCTAGTGTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR CAA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGCCAGTTTTCCCACCTaGTTCCTCTTCCATCAAAGG +
Preference number: 3 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVASFPT*FLFHQR
Trigger: CCTTTGATGGAAGAGGAACAAGGTGGGAAAACTGGC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
3UTR-3UTR CAA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTATCAAAAGAGAGCCTTaGAGGAAAATTCAGCACTAC +
Preference number: 3 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIIKREP*RKIQHY
Trigger: GTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGAT...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR CAA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCAAGGAGAGAGGATACTaGGGATTATATTTGGTTCAG +
Preference number: 3 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVKERGY*GLYLVQ
Trigger: CTGAACCAAATATAATCCCAAGTATCCTCTCTCCTT...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR-3UTR CAA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACACCGGAGTTCCTTGTaGGTTATTTATCACGTTCTG +
Preference number: 3 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLHRSSL*VIYHVL
Trigger: CAGAACGTGATAAATAACCAACAAGGAACTCCGGTG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR CCA 72 bp GTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTaGGATTATATTTGGTTCAGCCTTATCAAAAGAGAG +
Preference number: 3 (lower is better)
Translates to: VRHLQQGRREDT*DYIWFSLIKRE
Trigger: CTCTCTTTTGATAAGGCTGAACCAAATATAATCCCAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
3UTR-3UTR CAA 90 bp GTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAGAGTATTTCAATTAAAAAGGAGAGAGGATACTaGGGATTATATTTGGTTCAG +
Preference number: 3 (lower is better)
Translates to: VLSMLSVSMRGIQSISIKKERGY*GLYLVQ
Trigger: CTGAACCAAATATAATCCCAAGTATCCTCTCTCCTT...TTTAATTGAAATACTCTGAATTCCCCTCATGGAAACAGAGAGCATTGAGAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
3UTR-3UTR CAA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAACAACTTTTGCAGTATaGAGAAATCTCCACCAAAGC +
Preference number: 3 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPTTFAV*RNLHQS
Trigger: GCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR TCA 72 bp CAGCTCAGATTCATTTCTGGACAACTTTTGCAGTATTaGGAAATCTCCACCAAAGCCATAAAAGTATTTCTC +
Preference number: 3 (lower is better)
Translates to: QLRFISGQLLQY*EISTKAIKVFL
Trigger: GAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGTCCAGAAATGAATCTGAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
3UTR TCA 72 bp ACTGAATCGTGTGCAAATATTCTCTCCCTCACTCTCTaGTATTCCTCTTCTCTCTCTTCAATTGATTTACTT +
Preference number: 3 (lower is better)
Translates to: TESCANILSLTL*YSSSLSSIDLL
Trigger: AAGTAAATCAATTGAAGAGAGAGAAGAGGAATATCAGAGAGTGAGGGAGAGAATATTTGCACACGATTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446068.6
3UTR-3UTR CAA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTAAGGAGAGAGGATACTaGGGATTATATTTGGTTCAG +
Preference number: 3 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPKERGY*GLYLVQ
Trigger: CTGAACCAAATATAATCCCAAGTATCCTCTCTCCTT...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp GGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTACGCGGGACAGCGATCCTaGGGAGCCTGCACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GCGTAILRSLHCWKTRNYAGQRS*GACTAG
Trigger: TCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGC...GTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp TGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCCAAATGCTGCTGTGGTGGCTaGTGTTGGGACTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: WGFRSLPRGLPAQGHLAKCCCGG*CWDCPT
Trigger: GGTGGGGCAGTCCCAACAGCAGCCACCACAGCAGCA...TTTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp TGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCCAAAACTGAACCGGGGCCATaGGCCGGTACTGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: WGFRSLPRGLPAQGHLAKTEPGP*AGTVAW
Trigger: CCACGCAACAGTACCGGCCCATGGCCCCGGTTCAGT...TTTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp GACCTGATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTTCCAGTGGCTGGGAGTaGCCCTTGACCTGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: DLMGVQESPPRTAGSGSSSSGWE*PLTCLV
Trigger: AACCAGGCAGGTCAAGGGTCACTCCCAGCCACTGGA...AGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp GGATGGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAAGGAGAGGTGGATGGGTaGGGGACAGCGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GWVRDSDPEEPALLEDSEGEVDG*GTAILR
Trigger: CCTCAGGATCGCTGTCCCGCACCCATCCACCTCTCC...TTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp ACTCCTCTGAGCGTTGTACTGAACCGGGGCCATGGGCCGGTACTGTTGCGTGGTTGCGGGGAGGGCTGCTaGTGTGGTGGCTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TPLSVVLNRGHGPVLLRGCGEGC*CGGCCW
Trigger: CCAACAGCAGCCACCACAGCAGCAGCCCTCCCCGCA...ACCACGCAACAGTACCGGCCCATGGCCCCGGTTCAGTACAACGCTCAGAGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp CTGGCCTGTAGAGGCGATTACATAGCTGGGCTGCTGGGCCGGCTGTGGCATAAGGTCTCCCCCGAGGACTaGCGGCTCAGGGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: LACRGDYIAGLLGRLWHKVSPED*RLRVIW
Trigger: CCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGAC...CTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp GGATGGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTTCGCAGGGGCTGCTaGCTGGTGGGTGGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: GWVRDSDPEEPALLEDSELRRGC*LVGGLY
Trigger: ATACAACCCACCCACCAGTCAGCAGCCCCTGCGAAG...TTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR TCA 90 bp TGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCCAAATGGGTAGACAGGACCTaGTGGGGGTTCAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: WGFRSLPRGLPAQGHLAKWVDRT*WGFRSL
Trigger: GAGACTCCTGAACCCCCATCAGGTCCTGTCTACCCA...TTTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp ATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCCAAGCAGGCGGAGGCTGTTaGACAAATCCCTGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: MGVQESPPRTAGSGSSGQAGGGC*TNPCGE
Trigger: CTCACCACAGGGATTTGTGCAACAGCCTCCGCCTGC...TTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp GGATGGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAATGTAGCTGGTGCTGCTaGGAGCAACCTGGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: GWVRDSDPEEPALLEDSECSWCC*EQPGPL
Trigger: TAGGGGGCCAGGTTGCTCCCAGCAGCACCAGCTACA...TTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp GGACCTGATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCGCAGGGGCTGCTGACTaGTGGGTGGGTTGTATATTG +
Preference number: 4 (lower is better)
Translates to: GPDGGSGVSPEDCRLRVIAGAAD*WVGCIL
Trigger: CAATATACAACCCACCCACCAGTCAGCAGCCCCTGC...GATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp GAGCAACCTGGCCCCCTATTCCATTCTCTGGATAAGGCACACAGCCTGGAGAGCCCCTGGTCAGCACCGTaGTGCCCCCAAAACTCGCCG +
Preference number: 4 (lower is better)
Translates to: EQPGPLFHSLDKAHSLESPWSAP*CPQNSP
Trigger: CGGCGAGTTTTGGGGGCATCACGGTGCTGACCAGGG...GCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGGGGCCAGGTTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp GGACCTGATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCGGGCTTTAGATTaGGGTTGGAACTGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: GPDGGSGVSPEDCRLRVIWRALD*GWNCRS
Trigger: ACTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCA...GATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp GACCTGATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTCTGCTCCAGGCCCTTTaGTGGTCAGACCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: DLMGVQESPPRTAGSGSSLLQAL*WSDHLS
Trigger: ACTCAAGTGGTCTGACCACCAAAGGGCCTGGAGCAG...AGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp GACCTGATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTAGGAGCCTGCACTGCTaGAAGACTCGGAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: DLMGVQESPPRTAGSGSSRSLHC*KTRNLL
Trigger: AAGCAGGTTCCGAGTCTTCCAGCAGTGCAGGCTCCT...AGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp ATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCCAAGAAGGAGGATGTAGCTaGTGCTGCTGGGAGCAACCT +
Preference number: 4 (lower is better)
Translates to: MGVQESPPRTAGSGSSGQEGGCS*CCWEQP
Trigger: AGGTTGCTCCCAGCAGCACCAGCTACATCCTCCTTC...TTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp ATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCCAACGGCTCAGGGTCATCTaGCCAAACTGTGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: MGVQESPPRTAGSGSSGQRLRVI*PNCVAT
Trigger: TGTGGCAACACAGTTTGGCCAGATGACCCTGAGCCG...TTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp CTGGCCTGTAGAGGCGATTACATAGCTGGGCTGCTGGGCCGGCTGTGGCATAAGAGCCTAAGGTTGTTCTaGGGGGTGGGCGGTGTGACA +
Preference number: 4 (lower is better)
Translates to: LACRGDYIAGLLGRLWHKSLRLF*GVGGVT
Trigger: TGTCACACCGCCCACCCCTCAGAACAACCTTAGGCT...CTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp GATGGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACAGGCGGGATGCCTGTTaGAGCTTCAAGTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: DGCGTAILRSLHCWKTRNRRDAC*SFKWKE
Trigger: CTCCTTCCACTTGAAGCTGCAACAGGCATCCCGCCT...GTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp ATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCCAAGTAACCTGCTTGCTGTaGTGCCTGTGGCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: MGVQESPPRTAGSGSSGQVTCLL*CLWHLL
Trigger: CAACAGATGCCACAGGCAGCACAGCAAGCAGGTTAC...TTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp TGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCCAAAGAGACTGCTGGATATTaGACTGACTGGGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: WGFRSLPRGLPAQGHLAKETAGY*TDWEEA
Trigger: GGCTTCCTCCCAGTCAGTGCAATATCCAGCAGTCTC...TTTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp CTGGCCTGTAGAGGCGATTACATAGCTGGGCTGCTGGGCCGGCTGTGGCATAAGATAAGGCACACAGCCTaGAGAGCCAGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: LACRGDYIAGLLGRLWHKIRHTA*RASCHT
Trigger: GGTGTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTAT...CTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp CTGGCCTGTAGAGGCGATTACATAGCTGGGCTGCTGGGCCGGCTGTGGCATAAGGCTGGAGGGGCAGTGTaGGCCAATCAGCCTAAGGTT +
Preference number: 4 (lower is better)
Translates to: LACRGDYIAGLLGRLWHKAGGAV*ANQPKV
Trigger: AACCTTAGGCTGATTGGCCCACACTGCCCCTCCAGC...CTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp CTGGCCTGTAGAGGCGATTACATAGCTGGGCTGCTGGGCCGGCTGTGGCATAAGGGATATTGCACTGACTaGGAGGAAGCCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LACRGDYIAGLLGRLWHKGYCTD*EEACSP
Trigger: GGGGCTGCAGGCTTCCTCCCAGTCAGTGCAATATCC...CTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp CTGGCCTGTAGAGGCGATTACATAGCTGGGCTGCTGGGCCGGCTGTGGCATAAGCCTTGGAATCCCTGTTaGCCAGACAAGACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LACRGDYIAGLLGRLWHKPWNPC*PDKTGW
Trigger: CCAGCCAGTCTTGTCTGGTCAACAGGGATTCCAAGG...CTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp GATGGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTGGCGGGCTTTAGATTaGGGTTGGAACTGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: DGCGTAILRSLHCWKTRNWRALD*GWNCRS
Trigger: ACTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCA...GTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp GGATGGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTCCAGGCCCTTTGGTaGTCAGACCACTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GWVRDSDPEEPALLEDSELQALW*SDHLSS
Trigger: TGAACTCAAGTGGTCTGACCACCAAAGGGCCTGGAG...TTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp GAGCAACCTGGCCCCCTATTCCATTCTCTGGATAAGGCACACAGCCTGGAGAGCCTCTGGAGAGGTGGATaGGTGCGGGACAGCGATCCT +
Preference number: 4 (lower is better)
Translates to: EQPGPLFHSLDKAHSLESLWRGG*VRDSDP
Trigger: AGGATCGCTGTCCCGCACCCATCCACCTCTCCAGAG...GCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGGGGCCAGGTTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp GACCTGATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTCCCTATTCCATTCTCTaGATAAGGCACACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: DLMGVQESPPRTAGSGSSPYSIL*IRHTAW
Trigger: CCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGG...AGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp GACCTGATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTCCACATCATCTCTCATaGGAAAGTGCTGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: DLMGVQESPPRTAGSGSSPHHLS*ESAALE
Trigger: CTCCAACGCAGCACTTTCCCATGAGAGATGATGTGG...AGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp GGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTACGGTGGTCAGACCACTTaGGTTCATTTTCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GCGTAILRSLHCWKTRNYGGQTT*VHFLSC
Trigger: GCAGCTCAGAAAATGAACTCAAGTGGTCTGACCACC...GTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR TCA 90 bp GGTGCTGCTGGGAGCAACCTGGCCCCCTATTCCATTCTCTGGATAAGGCACACACCCAGATGTTCTCCCTaGGCCATCTCTGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GAAGSNLAPYSILWIRHTPRCSP*AISVAP
Trigger: AGGGGCAACAGAGATGGCTCAGGGAGAACATCTGGG...TGTGTGCCTTATCCAGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp ATACTTGCACAGTTTGTTCTGCAGCTAGCTGACATCACTGGGACAGTGCTGGAGGGCTGCGGGGAGGGCTaGTGCTGTGGTGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ILAQFVLQLADITGTVLEGCGEG*CCGGCC
Trigger: ACAGCAGCCACCACAGCAGCAGCCCTCCCCGCAGCC...CTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp CAGCCTGGAGAGCCAGCTGCCACACCTGAGACTAGGGGTGTGCTCTGGAGAGGTCAAAACTCGCCGTCTTaGTCATGGCGGGCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: QPGEPAATPETRGVLWRGQNSPS*SWRALD
Trigger: ATCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTG...ACCTCTCCAGAGCACACCCCTAGTCTCAGGTGTGGCAGCTGGCTCTCCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp ACTGACCAGATGGGTAATAATATACAGGCATCTGTGCAGGCGGAGGCTGTTGCAGGGACTGCCCCACCATaGCGCTTCGCAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TDQMGNNIQASVQAEAVAGTAPP*RFAGAA
Trigger: AGCAGCCCCTGCGAAGCGCCATGGTGGGGCAGTCCC...TGCAACAGCCTCCGCCTGCACAGATGCCTGTATATTATTACCCATCTGGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp TCTGACTCTGAGGTGGCTGCTGCACTCCTATTAGGCCTTGGAATCCCTGTTGACTGTGGTGGCTGCTGTTaGGACTGCCCCACCATGGCG +
Preference number: 4 (lower is better)
Translates to: SDSEVAAALLLGLGIPVDCGGCC*DCPTMA
Trigger: CGCCATGGTGGGGCAGTCCCAACAGCAGCCACCACA...GTCAACAGGGATTCCAAGGCCTAATAGGAGTGCAGCAGCCACCTCAGAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp CTGGCCTGTAGAGGCGATTACATAGCTGGGCTGCTGGGCCGGCTGTGGCATAAGTTGCTGTGCTGCCTGTaGCATCTGTTGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LACRGDYIAGLLGRLWHKLLCCL*HLLTPL
Trigger: CAGAGGAGTCAACAGATGCCACAGGCAGCACAGCAA...CTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGCCTTCTCTGGCCGGCTaGCCGCCGGGAGTGAACGCG +
Preference number: 4 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKPSLAG*PPGVNA
Trigger: CGCGTTCACTCCCGGCGGCCAGCCGGCCAGAGAAGG...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR TCA 90 bp ACTGACCAGATGGGTAATAATATACAGGCATCTGTGCAGGCGGAGGCTGTTGCACCCTGGTCAGCACCGTaGTGCCCCCAAAACTCGCCG +
Preference number: 4 (lower is better)
Translates to: TDQMGNNIQASVQAEAVAPWSAP*CPQNSP
Trigger: CGGCGAGTTTTGGGGGCATCACGGTGCTGACCAGGG...TGCAACAGCCTCCGCCTGCACAGATGCCTGTATATTATTACCCATCTGGTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp AAGGGCTGGCCTGTGTGTGGATTAAGAAGGATGCTTCCAGGCGGGATGCCTGTTTGTCGGAGTCTGTGCTaGTCCAGGCCCTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KGWPVCGLRRMLPGGMPVCRSLC*SRPFGG
Trigger: ACCACCAAAGGGCCTGGAGCAGCACAGACTCCGACA...AACAGGCATCCCGCCTGGAAGCATCCTTCTTAATCCACACACAGGCCAGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp GCAGGAGTTCCATCGGGATTCACAAAGGGCTGGCCTGTGTGTGGATTAAGAAGGGGAGGATGTAGCTGGTaGTGCTGGGAGCAACCTGGC +
Preference number: 4 (lower is better)
Translates to: AGVPSGFTKGWPVCGLRRGGCSW*CWEQPG
Trigger: GCCAGGTTGCTCCCAGCAGCACCAGCTACATCCTCC...CCTTCTTAATCCACACACAGGCCAGCCCTTTGTGAATCCCGATGGAACTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp ATACTTGCACAGTTTGTTCTGCAGCTAGCTGACATCACTGGGACAGTGCTGGAGGGCTGCTGTTGGGACTaGCCCACCATGGCGCTTCGC +
Preference number: 4 (lower is better)
Translates to: ILAQFVLQLADITGTVLEGCCWD*PTMALR
Trigger: GCGAAGCGCCATGGTGGGGCAGTCCCAACAGCAGCC...CTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp CTGGCCTGTAGAGGCGATTACATAGCTGGGCTGCTGGGCCGGCTGTGGCATAAGTCTCTCATGGGAAAGTaGTGCGTTGGAGACACAGGT +
Preference number: 4 (lower is better)
Translates to: LACRGDYIAGLLGRLWHKSLMGK*CVGDTG
Trigger: ACCTGTGTCTCCAACGCAGCACTTTCCCATGAGAGA...CTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp CCCCTATTCCATTCTCTGGATAAGGCACACAGCCTGGAGAGCCAGCTGCCACACCTGAGGAGCCTGCACTaGTGGAAGACTCGGAACTAC +
Preference number: 4 (lower is better)
Translates to: PLFHSLDKAHSLESQLPHLRSLH*WKTRNY
Trigger: GTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAG...GTGTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGCGCTGCCCCTGCTGCTaGTGGTCTCTGCTCCGGACG +
Preference number: 4 (lower is better)
Translates to: FGELRGKTSPTRKERGYLRCPCC*WSLLRT
Trigger: CGTCCGGAGCAGAGACCAGCAGCAGCAGGGGCAGCG...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CCA 90 bp ACTGCTGGAAGACTCGGAACTACCTGCTTTGGACAGCTTCCCGGTACTCCTAGTTGTGCTCTGGAGAGGTaGATGGGTGCGGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: TAGRLGTTCFGQLPGTPSCALER*MGAGQR
Trigger: TCGCTGTCCCGCACCCATCCACCTCTCCAGAGCACA...ACTAGGAGTACCGGGAAGCTGTCCAAAGCAGGTAGTTCCGAGTCTTCCAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp CCCCTATTCCATTCTCTGGATAAGGCACACAGCCTGGAGAGCCAGCTGCCACACCTGCTGGGAGCAACCTaGCCCCCTATTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: PLFHSLDKAHSLESQLPHLLGAT*PPIPFS
Trigger: AGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCAG...GTGTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp GAGCAACCTGGCCCCCTATTCCATTCTCTGGATAAGGCACACAGCCTGGAGAGCGAAGGAGGATGTAGCTaGTGCTGCTGGGAGCAACCT +
Preference number: 4 (lower is better)
Translates to: EQPGPLFHSLDKAHSLESEGGCS*CCWEQP
Trigger: AGGTTGCTCCCAGCAGCACCAGCTACATCCTCCTTC...GCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGGGGCCAGGTTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp GGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTACGGATTCACAAAGGGCTaGCCTGTGTGTGGATTAAGA +
Preference number: 4 (lower is better)
Translates to: GCGTAILRSLHCWKTRNYGFTKG*PVCGLR
Trigger: TCTTAATCCACACACAGGCCAGCCCTTTGTGAATCC...GTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp GATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTACCTGCTTTGGACAGCGGGGCTGCTGACTGGTaGGTGGGTTGTATATTGCAG +
Preference number: 4 (lower is better)
Translates to: DPEEPALLEDSELPALDSGAADW*VGCILQ
Trigger: CTGCAATATACAACCCACCCACCAGTCAGCAGCCCC...GCTGTCCAAAGCAGGTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCGGCTGGACCTGCTGTTaGGGCTGCGGGGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSGWTCC*GCGEGC
Trigger: GCAGCCCTCCCCGCAGCCCCAACAGCAGGTCCAGCC...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp CCCTATTCCATTCTCTGGATAAGGCACACAGCCTGGAGAGCCAGCTGCCACACCAGGAGCCTGCACTGCTaGAAGACTCGGAACTACCTG +
Preference number: 4 (lower is better)
Translates to: PYSILWIRHTAWRASCHTRSLHC*KTRNYL
Trigger: CAGGTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCT...GGTGTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR TCA 90 bp GATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTACCTGCTTTGGACAGCTTCCTGGGAGCAAACTaGATTCTGGTGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: DPEEPALLEDSELPALDSFLGAN*ILVLLV
Trigger: GACCAGCAGCACCAGAATTCAGTTTGCTCCCAGGAA...GCTGTCCAAAGCAGGTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp AAGGGCTGGCCTGTGTGTGGATTAAGAAGGATGCTTCCAGGCGGGATGCCTGTTAACTGTCGGAGTCTGTaGTGCTCCAGGCCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KGWPVCGLRRMLPGGMPVNCRSL*CSRPFG
Trigger: ACCAAAGGGCCTGGAGCAGCACAGACTCCGACAGTT...AACAGGCATCCCGCCTGGAAGCATCCTTCTTAATCCACACACAGGCCAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp CCCCTATTCCATTCTCTGGATAAGGCACACAGCCTGGAGAGCCAGCTGCCACACAGACTCGGAACTACCTaGTTTGGACAGCTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: PLFHSLDKAHSLESQLPHRLGTT*FGQLPG
Trigger: ACCGGGAAGCTGTCCAAAGCAGGTAGTTCCGAGTCT...GTGTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp AAGGGCTGGCCTGTGTGTGGATTAAGAAGGATGCTTCCAGGCGGGATGCCTGTTTCGCCGTCTTGGTCATaGCGGGCTTTAGATTGCGGT +
Preference number: 4 (lower is better)
Translates to: KGWPVCGLRRMLPGGMPVSPSWS*RALDCG
Trigger: ACCGCAATCTAAAGCCCGCCATGACCAAGACGGCGA...AACAGGCATCCCGCCTGGAAGCATCCTTCTTAATCCACACACAGGCCAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp ATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTACCTGCTTTGGACAGCTCGGAACTACCTGCTTTaGACAGCTTCCCGGTACTCC +
Preference number: 4 (lower is better)
Translates to: ILRSLHCWKTRNYLLWTARNYLL*TASRYS
Trigger: GGAGTACCGGGAAGCTGTCCAAAGCAGGTAGTTCCG...AGCTGTCCAAAGCAGGTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR TCA 90 bp ACTGACCAGATGGGTAATAATATACAGGCATCTGTGCAGGCGGAGGCTGTTGCACTTCGCAGGGGCTGCTaGCTGGTGGGTGGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: TDQMGNNIQASVQAEAVALRRGC*LVGGLY
Trigger: ATACAACCCACCCACCAGTCAGCAGCCCCTGCGAAG...TGCAACAGCCTCCGCCTGCACAGATGCCTGTATATTATTACCCATCTGGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp ATACTTGCACAGTTTGTTCTGCAGCTAGCTGACATCACTGGGACAGTGCTGGAGGCTGGGAGTGACCCTTaGCCTGCCTGGTTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: ILAQFVLQLADITGTVLEAGSDP*PAWLGS
Trigger: GCTACCTAACCAGGCAGGTCAAGGGTCACTCCCAGC...CTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCACCTGCTGTTGGGGCTaGGGGGAGGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSTCCWG*GEGCCC
Trigger: ACAGCAGCAGCCCTCCCCGCAGCCCCAACAGCAGGT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCGTCTCCCCCGAGGACTaGCGGCTCAGGGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSVSPED*RLRVIW
Trigger: CCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGAC...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp ATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCCAAGACATGACAGAAATATaGACCATTAACCAGCTAACG +
Preference number: 4 (lower is better)
Translates to: MGVQESPPRTAGSGSSGQDMTEI*TINQLT
Trigger: CGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTC...TTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp TGCTGGGAGCAACCTGGCCCCCTATTCCATTCTCTGGATAAGGCACACAGCCTGGCTTTAGATTGCGGTTaGAACTGTCGGAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: CWEQPGPLFHSLDKAHSLALDCG*NCRSLC
Trigger: GCACAGACTCCGACAGTTCCAACCGCAATCTAAAGC...CAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp CACAGCCAGAGCTCTCAGAATTTGACCTGCCAACCAGCATTGCTCATACTTGCACTCTGGAGAGGTGGATaGGTGCGGGACAGCGATCCT +
Preference number: 4 (lower is better)
Translates to: HSQSSQNLTCQPALLILALWRGG*VRDSDP
Trigger: AGGATCGCTGTCCCGCACCCATCCACCTCTCCAGAG...TGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp TGCTGGGAGCAACCTGGCCCCCTATTCCATTCTCTGGATAAGGCACACAGCCTGCCCTATTCCATTCTCTaGATAAGGCACACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CWEQPGPLFHSLDKAHSLPYSIL*IRHTAW
Trigger: CCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGG...CAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp GCCCCCTATTCCATTCTCTGGATAAGGCACACAGCCTGGAGAGCCAGCTGCCACTGTTGCAGCTTCAAGTaGAAGGAGGATGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: APYSILWIRHTAWRASCHCCSFK*KEDVAG
Trigger: ACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACA...GTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp AAGGGCTGGCCTGTGTGTGGATTAAGAAGGATGCTTCCAGGCGGGATGCCTGTTGGGCTGGCCTGTGTGTaGATTAAGAAGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: KGWPVCGLRRMLPGGMPVGLACV*IKKDAS
Trigger: GGAAGCATCCTTCTTAATCCACACACAGGCCAGCCC...AACAGGCATCCCGCCTGGAAGCATCCTTCTTAATCCACACACAGGCCAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp GCAGGAGTTCCATCGGGATTCACAAAGGGCTGGCCTGTGTGTGGATTAAGAAGGGCAGGGGCTGCTGACTaGTGGGTGGGTTGTATATTG +
Preference number: 4 (lower is better)
Translates to: AGVPSGFTKGWPVCGLRRAGAAD*WVGCIL
Trigger: CAATATACAACCCACCCACCAGTCAGCAGCCCCTGC...CCTTCTTAATCCACACACAGGCCAGCCCTTTGTGAATCCCGATGGAACTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTGGCTGGACCTGCTGTTaGGGCTGCGGGGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAGWTCC*GCGEGC
Trigger: GCAGCCCTCCCCGCAGCCCCAACAGCAGGTCCAGCC...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp ATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTACCTGCTTTGGACAGCTCTTGAGTTCATTTTCTaGGCTGCTCTGTCGACTCCC +
Preference number: 4 (lower is better)
Translates to: ILRSLHCWKTRNYLLWTALEFIF*AALSTP
Trigger: GGGAGTCGACAGAGCAGCTCAGAAAATGAACTCAAG...AGCTGTCCAAAGCAGGTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR TCA 90 bp CTGGCCTGTAGAGGCGATTACATAGCTGGGCTGCTGGGCCGGCTGTGGCATAAGCATTTGAGTGTTGAGTaGATACTTAAGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LACRGDYIAGLLGRLWHKHLSVE*ILKSSA
Trigger: GGCTGAGGACTTAAGTATTCACTCAACACTCAAATG...CTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGGGAGTGGCCGTCTCCTaGTCAGTCCCTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FGELRGKTSPTRKERGYLGVAVS*SVPPSS
Trigger: AGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTCC...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp CACAGCCAGAGCTCTCAGAATTTGACCTGCCAACCAGCATTGCTCATACTTGCATGTCGGAGTCTGTGCTaGTCCAGGCCCTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: HSQSSQNLTCQPALLILACRSLC*SRPFGG
Trigger: ACCACCAAAGGGCCTGGAGCAGCACAGACTCCGACA...TGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp CACAGCCAGAGCTCTCAGAATTTGACCTGCCAACCAGCATTGCTCATACTTGCACTGAGGAGCCTGCACTaGTGGAAGACTCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: HSQSSQNLTCQPALLILALRSLH*WKTRNL
Trigger: CAGGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAG...TGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTGGCTGCGGGGAGGGCTaGTGCTGTGGTGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAGCGEG*CCGGCC
Trigger: ACAGCAGCCACCACAGCAGCAGCCCTCCCCGCAGCC...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTTGGTTATTTATCACGTAGTGACCAGAGGGCCTaGCATCTGTGGCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GRKPSRFAPEFLVGYLSRSDQRA*HLWLRW
Trigger: CCACCGCAGCCACAGATGGCAGGCCCTCTGGTCACT...ACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTCCCCGCTGCCCCTGCTaGTGCTGGTCTCTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSPRCPC*CWSLLR
Trigger: CCGGAGCAGAGACCAGCAGCAGCAGGGGCAGCGGGG...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CCA 90 bp TTGTATATTGCAGGAGTTCCATCGGGATTCACAAAGGGCTGGCCTGTGTGTGGAATAAGGCACACAGCCTaGAGAGCCAGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: LYIAGVPSGFTKGWPVCGIRHTA*RASCHT
Trigger: GGTGTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTAT...TCCACACACAGGCCAGCCCTTTGTGAATCCCGATGGAACTCCTGCAATATACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTGGGACTGCCCCACCATaGCGCTTCGCAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAGTAPP*RFAGAA
Trigger: AGCAGCCCCTGCGAAGCGCCATGGTGGGGCAGTCCC...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGGGACTGCCCCACCATaGCGCTTCGCAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARGTAPP*RFAGAA
Trigger: AGCAGCCCCTGCGAAGCGCCATGGTGGGGCAGTCCC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGACATTGTTGGGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTTGGTTAGGCGATTACATAGCTaGGCTGCTGGGCCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RHCWVGNHHALHRSSLLVRRLHS*AAGPAV
Trigger: CACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCT...AACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACCCAACAATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTGATCCCACACAGCTGTaGCAGCCAGGGCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLDPTQL*QPGLRR
Trigger: CCGCCGCAGCCCTGGCTGCCACAGCTGTGTGGGATC...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR TCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCGGGACAGCGATCCTaGGGAGCCTGCACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARAGQRS*GACTAG
Trigger: TCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCTTCGCAGGGGCTGCTaGCTGGTGGGTGGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSLRRGC*LVGGLY
Trigger: ATACAACCCACCCACCAGTCAGCAGCCCCTGCGAAG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp ATACTTGCACAGTTTGTTCTGCAGCTAGCTGACATCACTGGGACAGTGCTGGAGTGCTGGATATTGCACTaGCTGGGAGGAAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ILAQFVLQLADITGTVLECWILH*LGGSLQ
Trigger: CTGCAGGCTTCCTCCCAGTCAGTGCAATATCCAGCA...CTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCGGAGTGGCCGTCTCCTaGTCAGTCCCTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSGVAVS*SVPPSS
Trigger: AGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTCC...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGGCCTCCAGCCGCCTCTaGAGTTCCAGTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKASSRL*SSSFSS
Trigger: AGAGGAGAAACTGGAACTGCAGAGGCGGCTGGAGGC...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TTGTATATTGCAGGAGTTCCATCGGGATTCACAAAGGGCTGGCCTGTGTGTGGATGCTTCCAGGCGGGATaGCTGTTGCAGCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: LYIAGVPSGFTKGWPVCGCFQAG*LLQLQV
Trigger: CACTTGAAGCTGCAACAGGCATCCCGCCTGGAAGCA...TCCACACACAGGCCAGCCCTTTGTGAATCCCGATGGAACTCCTGCAATATACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGGCTGCTGTTGGGACTaGCCCACCATGGCGCTTCGC +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARGCCWD*PTMALR
Trigger: GCGAAGCGCCATGGTGGGGCAGTCCCAACAGCAGCC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGATGCGGGGAGGGCTGCTaGTGTGGTGGCTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARCGEGC*CGGCCW
Trigger: CCAACAGCAGCCACCACAGCAGCAGCCCTCCCCGCA...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTACCTGCTGTTGGGGCTaGGGGGAGGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARATCCWG*GEGCCC
Trigger: ACAGCAGCAGCCCTCCCCGCAGCCCCAACAGCAGGT...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAACCTGCTGTTGGGGCTaGGGGGAGGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARTCCWG*GEGCCC
Trigger: ACAGCAGCAGCCCTCCCCGCAGCCCCAACAGCAGGT...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCTGACTCTGAGGTGGCTGCTGCACTCCTATTAGGCCTTGGAATCCCTGTTGACCTGGCCAAACTGTGTTaGCACATCATCTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: SDSEVAAALLLGLGIPVDLAKLC*HIISHG
Trigger: CCCATGAGAGATGATGTGGCAACACAGTTTGGCCAG...GTCAACAGGGATTCCAAGGCCTAATAGGAGTGCAGCAGCCACCTCAGAGTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCCCGTCCCACCAGCAATaGAGCGTCCCTCTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAPSHQQ*SVPLPV
Trigger: GACCGGAAGAGGGACGCTGCATTGCTGGTGGGACGG...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCTGCCGTTCTCTGGAGTaGCCGTCTCCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSCRSLE*PSPAQS
Trigger: GGACTGAGCAGGAGACGGCCACTCCAGAGAACGGCA...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp TTGTATATTGCAGGAGTTCCATCGGGATTCACAAAGGGCTGGCCTGTGTGTGGACTGCTCCAGGCCCTTTaGTGGTCAGACCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: LYIAGVPSGFTKGWPVCGLLQAL*WSDHLS
Trigger: ACTCAAGTGGTCTGACCACCAAAGGGCCTGGAGCAG...TCCACACACAGGCCAGCCCTTTGTGAATCCCGATGGAACTCCTGCAATATACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp TCTGACTCTGAGGTGGCTGCTGCACTCCTATTAGGCCTTGGAATCCCTGTTGACGCTTTAGATTGCGGTTaGAACTGTCGGAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SDSEVAAALLLGLGIPVDALDCG*NCRSLC
Trigger: GCACAGACTCCGACAGTTCCAACCGCAATCTAAAGC...GTCAACAGGGATTCCAAGGCCTAATAGGAGTGCAGCAGCCACCTCAGAGTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp GGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTTGGTTATTTATCACGTTGTGCTCTGGAGAGGTaGATGGGTGCGGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: GRKPSRFAPEFLVGYLSRCALER*MGAGQR
Trigger: TCGCTGTCCCGCACCCATCCACCTCTCCAGAGCACA...ACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCTGCTGGGCCGGCTGTaGCATAAGGGAGGATGGGTA +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSLLGRL*HKGGWV
Trigger: TACCCATCCTCCCTTATGCCACAGCCGGCCCAGCAG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGGGAGTGGGGGACAACTaGGGCATTACTTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: FGELRGKTSPTRKERGYLGVGDN*GITSPR
Trigger: CCTGGGAGAAGTAATGCCCCAGTTGTCCCCCACTCC...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATCCCACTCTGTGCCCCTaGCCGCTTCGCTCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYPTLCP*PLRSVR
Trigger: TCTTACCGAGCGAAGCGGCCAGGGGCACAGAGTGGG...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CCA 90 bp GCAGGAACAAAGCACCATTTACACCTTATTTCTCTGCACCAATTGTATGGATACTGCCCCTGCTGCTGCTaGTCTCTGCTCCGGACGCGC +
Preference number: 4 (lower is better)
Translates to: AGTKHHLHLISLHQLYGYCPCCC*SLLRTR
Trigger: GCGCGTCCGGAGCAGAGACCAGCAGCAGCAGGGGCA...GTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGTTCTGCAGTGTCGGCTaGGATCCCACACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKFCSVG*DPTQLW
Trigger: CCACAGCTGTGTGGGATCCCAGCCGACACTGCAGAA...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR TCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACCCTGGTCAGCACCGTaGTGCCCCCAAAACTCGCCG +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIPWSAP*CPQNSP
Trigger: CGGCGAGTTTTGGGGGCATCACGGTGCTGACCAGGG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGCGGGACAGCGATCCTaGGGAGCCTGCACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIAGQRS*GACTAG
Trigger: TCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCTGGGTAGACAGGACCTaGTGGGGGTTCAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSWVDRT*WGFRSL
Trigger: GAGACTCCTGAACCCCCATCAGGTCCTGTCTACCCA...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp AATTTGACCTGCCAACCAGCATTGCTCATACTTGCACAGTTTGTTCTGCAGCTATGCTGGGGCAGTCCTTaGGAACCCTGGGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: NLTCQPALLILAQFVLQLCWGSP*EPWVIG
Trigger: GCCAATGACCCAGGGTTCTCAAGGACTGCCCCAGCA...TAGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCCCAGATGTTCTCCCTaGGCCATCTCTGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSPRCSP*AISVAP
Trigger: AGGGGCAACAGAGATGGCTCAGGGAGAACATCTGGG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444190.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCGGAGTGGCCGTCTCCTaGTCAGTCCCTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAGVAVS*SVPPSS
Trigger: AGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTCC...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCTGTCGGAGTCTGTGCTaGTCCAGGCCCTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSCRSLC*SRPFGG
Trigger: ACCACCAAAGGGCCTGGAGCAGCACAGACTCCGACA...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGGAGAGGTGGATGGGTaGGGGACAGCGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARGEVDG*GTAILR
Trigger: CCTCAGGATCGCTGTCCCGCACCCATCCACCTCTCC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTGGAGAGGTGGATGGGTaGGGGACAGCGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAGEVDG*GTAILR
Trigger: CCTCAGGATCGCTGTCCCGCACCCATCCACCTCTCC...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGGATGTAGCTGGTGCTaGTGGGAGCAACCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARGCSWC*WEQPGP
Trigger: GGGGCCAGGTTGCTCCCAGCAGCACCAGCTACATCC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGGCTGCTGTTGGGACTaGCCCACCATGGCGCTTCGC +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIGCCWD*PTMALR
Trigger: GCGAAGCGCCATGGTGGGGCAGTCCCAACAGCAGCC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATGCTGCTGTGGTGGCTaGTGTTGGGACTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKCCCGG*CWDCPT
Trigger: GGTGGGGCAGTCCCAACAGCAGCCACCACAGCAGCA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTGCTGCTGTGGTGGCTaGTGTTGGGACTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARACCCGG*CWDCPT
Trigger: GGTGGGGCAGTCCCAACAGCAGCCACCACAGCAGCA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGATGCTGCTGTGGTGGCTaGTGTTGGGACTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARCCCGG*CWDCPT
Trigger: GGTGGGGCAGTCCCAACAGCAGCCACCACAGCAGCA...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGGCTGCGGGGAGGGCTaGTGCTGTGGTGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAGCGEG*CCGGCC
Trigger: ACAGCAGCCACCACAGCAGCAGCCCTCCCCGCAGCC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTGCGGTGGCTGGACCTaGTGTTGGGGCTGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLACGGWT*CWGCGE
Trigger: CTCCCCGCAGCCCCAACAGCAGGTCCAGCCACCGCA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAAGTGACCAGAGGGCCTaGCATCTGTGGCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARSDQRA*HLWLRW
Trigger: CCACCGCAGCCACAGATGGCAGGCCCTCTGGTCACT...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CACAGCCAGAGCTCTCAGAATTTGACCTGCCAACCAGCATTGCTCATACTTGCAACCTGCTTGCTGTGCTaGCTGTGGCATCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: HSQSSQNLTCQPALLILATCLLC*LWHLLT
Trigger: AGTCAACAGATGCCACAGGCAGCACAGCAAGCAGGT...TGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp ATACTTGCACAGTTTGTTCTGCAGCTAGCTGACATCACTGGGACAGTGCTGGAGCTCATGGGAAAGTGCTaGGTTGGAGACACAGGTAGG +
Preference number: 4 (lower is better)
Translates to: ILAQFVLQLADITGTVLELMGKC*VGDTGR
Trigger: CCTACCTGTGTCTCCAACGCAGCACTTTCCCATGAG...CTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCTCCTCTCCCACTCTGTaGCCCTGGCCGCTTCGCTCG +
Preference number: 4 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCSSPTL*PWPLRS
Trigger: CGAGCGAAGCGGCCAGGGGCACAGAGTGGGAGAGGA...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR GCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCGACGCGCTCAGAAGGTaGCACCGCCGCCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVDALRR*HRRLLW
Trigger: CCAGAGAAGGCGGCGGTGGCACCTTCTGAGCGCGTC...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATAAGGCACACAGCCTaGAGAGCCAGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSIRHTA*RASCHT
Trigger: GGTGTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTAT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGGCTGGACCTGCTGTTaGGGCTGCGGGGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLGWTCC*GCGEGC
Trigger: GCAGCCCTCCCCGCAGCCCCAACAGCAGGTCCAGCC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAACTGAACCGGGGCCATaGGCCGGTACTGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARTEPGP*AGTVAW
Trigger: CCACGCAACAGTACCGGCCCATGGCCCCGGTTCAGT...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
3UTR CAA 72 bp TGCTCCCACCACTCCTCAGCCAATCCAAAGAGAGGCTaGCAGGCTCTCATTCTCTCCTACAAAGCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: CSHHSSANPKRG*QALILSYKASL
Trigger: AAGACTAGCTTTGTAGGAGAGAATGAGAGCCTGCAAGCCTCTCTTTGGATTGGCTGAGGAGTGGTGGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTCTTCGCAGGGGCTGCTaGCTGGTGGGTGGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARALRRGC*LVGGLY
Trigger: ATACAACCCACCCACCAGTCAGCAGCCCCTGCGAAG...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATGCTGGGGCAGTCCTTaGGAACCCTGGGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKCWGSP*EPWVIG
Trigger: GCCAATGACCCAGGGTTCTCAAGGACTGCCCCAGCA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp ACTGACCAGATGGGTAATAATATACAGGCATCTGTGCAGGCGGAGGCTGTTGCAAGAGCTCTCAGAATTTaGCCTGCCAACCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: TDQMGNNIQASVQAEAVARALRI*PANQHC
Trigger: GCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCT...TGCAACAGCCTCCGCCTGCACAGATGCCTGTATATTATTACCCATCTGGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTCCTGGACAGACTGAGTaGCCAGAGGGCCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAPGQTE*PEGLPS
Trigger: AGATGGCAGGCCCTCTGGTCACTCAGTCTGTCCAGG...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACCTGGACAGACTGAGTaGCCAGAGGGCCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKPGQTE*PEGLPS
Trigger: AGATGGCAGGCCCTCTGGTCACTCAGTCTGTCCAGG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCGGAGTGGCCGTCTCCTaGTCAGTCCCTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCGVAVS*SVPPSS
Trigger: AGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTCC...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCGGAAGACTCGGAACCTaGTTTGGACAGCTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSGRLGT*FGQLPG
Trigger: ACCGGGAAGCTGTCCAAAGCAGGTTCCGAGTCTTCC...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGGAGAGGTGGATGGGTaGGGGACAGCGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIGEVDG*GTAILR
Trigger: CCTCAGGATCGCTGTCCCGCACCCATCCACCTCTCC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGGAGGATGTAGCTGGTaGTGCTGGGAGCAACCTGGC +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARGGCSW*CWEQPG
Trigger: GCCAGGTTGCTCCCAGCAGCACCAGCTACATCCTCC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCAGGCGGGATGCCTGTTaGAGCTTCAAGTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSRRDAC*SFKWKE
Trigger: CTCCTTCCACTTGAAGCTGCAACAGGCATCCCGCCT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTTGGTTATTTATCACGTTGCTTCCAGGCGGGATaGCTGTTGCAGCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: GRKPSRFAPEFLVGYLSRCFQAG*LLQLQV
Trigger: CACTTGAAGCTGCAACAGGCATCCCGCCTGGAAGCA...ACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTGCGGGGAGGGCTGCTaGTGTGGTGGCTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLACGEGC*CGGCCW
Trigger: CCAACAGCAGCCACCACAGCAGCAGCCCTCCCCGCA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGGCTGCGGGGAGGGCTaGTGCTGTGGTGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLGCGEG*CCGGCC
Trigger: ACAGCAGCCACCACAGCAGCAGCCCTCCCCGCAGCC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTACCTGCTGTTGGGGCTaGGGGGAGGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLATCCWG*GEGCCC
Trigger: ACAGCAGCAGCCCTCCCCGCAGCCCCAACAGCAGGT...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGTCTCCCCCGAGGACTaGCGGCTCAGGGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAVSPED*RLRVIW
Trigger: CCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGAC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCCTCCTGTAGGAAGCTaGTGGCCTGTAGAGGCGATT +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSPPVGS*WPVEAI
Trigger: AATCGCCTCTACAGGCCAGCAGCTTCCTACAGGAGG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CACAGCCAGAGCTCTCAGAATTTGACCTGCCAACCAGCATTGCTCATACTTGCAGAAACCATCACGCTTTaGACCGGAGTTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: HSQSSQNLTCQPALLILAETITL*TGVPCW
Trigger: CCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTC...TGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATCTCTGCTCTCAAAGCTaGCACTCTCGCAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYLCSQS*HSRRLP
Trigger: TGGCAGCCTGCGAGAGTGGCAGCTTTGAGAGCAGAG...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR GCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTGCTGCTGCTGGTCTCTaGTCCGGACGCGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFAAAGL*SGRAQK
Trigger: CTTCTGAGCGCGTCCGGAGCAGAGACCAGCAGCAGC...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTGCCGTTCTCTGGAGTaGCCGTCTCCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLCRSLE*PSPAQS
Trigger: GGACTGAGCAGGAGACGGCCACTCCAGAGAACGGCA...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTGCCGTTCTCTGGAGTaGCCGTCTCCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYCRSLE*PSPAQS
Trigger: GGACTGAGCAGGAGACGGCCACTCCAGAGAACGGCA...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCTGCCGTTCTCTGGAGTaGCCGTCTCCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCCRSLE*PSPAQS
Trigger: GGACTGAGCAGGAGACGGCCACTCCAGAGAACGGCA...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp ATACTTGCACAGTTTGTTCTGCAGCTAGCTGACATCACTGGGACAGTGCTGGAGCAAAACTCGCCGTCTTaGTCATGGCGGGCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: ILAQFVLQLADITGTVLEQNSPS*SWRALD
Trigger: ATCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTG...CTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCACTCGGAACCTGCTTTaGACAGCTTCCCGGTACTCC +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSTRNLL*TASRYS
Trigger: GGAGTACCGGGAAGCTGTCCAAAGCAGGTTCCGAGT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATGTGCTCTGGAGAGGTaGATGGGTGCGGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKCALER*MGAGQR
Trigger: TCGCTGTCCCGCACCCATCCACCTCTCCAGAGCACA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATGTAGCTGGTGCTGCTaGGAGCAACCTGGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKCSWCC*EQPGPL
Trigger: TAGGGGGCCAGGTTGCTCCCAGCAGCACCAGCTACA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTGTAGCTGGTGCTGCTaGGAGCAACCTGGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARACSWCC*EQPGPL
Trigger: TAGGGGGCCAGGTTGCTCCCAGCAGCACCAGCTACA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCGGGGCTGCTGACTGGTaGGTGGGTTGTATATTGCAG +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSGAADW*VGCILQ
Trigger: CTGCAATATACAACCCACCCACCAGTCAGCAGCCCC...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGGCTGGACCTGCTGTTaGGGCTGCGGGGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVGWTCC*GCGEGC
Trigger: GCAGCCCTCCCCGCAGCCCCAACAGCAGGTCCAGCC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCGGCTCAGGGTCATCTaGCCAAACTGTGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSRLRVI*PNCVAT
Trigger: TGTGGCAACACAGTTTGGCCAGATGACCCTGAGCCG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACTGCTGGGCCGGCTGTaGCATAAGGGAGGATGGGTA +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKLLGRL*HKGGWV
Trigger: TACCCATCCTCCCTTATGCCACAGCCGGCCCAGCAG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTAGGCGATTACATAGCTaGGCTGCTGGGCCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARARRLHS*AAGPAV
Trigger: CACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCT...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATGGAGTGGGGGACAACTaGGGCATTACTTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYGVGDN*GITSPR
Trigger: CCTGGGAGAAGTAATGCCCCAGTTGTCCCCCACTCC...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp ATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTACCTGCTTTGGACAGCTACAAAAAGGCTTTCCTaGGAGCAAACTGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: ILRSLHCWKTRNYLLWTATKRLS*EQTEFW
Trigger: CCAGAATTCAGTTTGCTCCCAGGAAAGCCTTTTTGT...AGCTGTCCAAAGCAGGTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCAGTCCGACCGTCTGTaGGTCCGACTAGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVQSDRL*VRLAAR
Trigger: CCGAGCTGCTAGTCGGACCCACAGACGGTCGGACTG...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR TCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACCCTGGTCAGCACCGTaGTGCCCCCAAAACTCGCCG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLPWSAP*CPQNSP
Trigger: CGGCGAGTTTTGGGGGCATCACGGTGCTGACCAGGG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCGGGACAGCGATCCTaGGGAGCCTGCACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLAGQRS*GACTAG
Trigger: TCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATGGGTAGACAGGACCTaGTGGGGGTTCAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKWVDRT*WGFRSL
Trigger: GAGACTCCTGAACCCCCATCAGGTCCTGTCTACCCA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCGTACTGTTGCGTGGTTaGGGTAGGGTACTGACCAGA +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSVLLRG*GRVLTR
Trigger: TCTGGTCAGTACCCTACCTCAACCACGCAACAGTAC...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGCTGGGAGTGACCCTTaGCCTGCCTGGTTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIAGSDP*PAWLGS
Trigger: GCTACCTAACCAGGCAGGTCAAGGGTCACTCCCAGC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTCTCTCTCAGGCTGTCTaGCTGCTCCCACCTGTCCGT +
Preference number: 4 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSLSQAV*LLPPVR
Trigger: ACGGACAGGTGGGAGCAGTCAGACAGCCTGAGAGAG...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR GCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGGAGTGGCCGTCTCCTaGTCAGTCCCTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIGVAVS*SVPPSS
Trigger: AGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTCC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTGGAGTGGCCGTCTCCTaGTCAGTCCCTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSGVAVS*SVPPSS
Trigger: AGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTCC...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACGCCTCCAGCCGCCTCTaGAGTTCCAGTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYASSRL*SSSFSS
Trigger: AGAGGAGAAACTGGAACTGCAGAGGCGGCTGGAGGC...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTGCCTCCAGCCGCCTCTaGAGTTCCAGTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLASSRL*SSSFSS
Trigger: AGAGGAGAAACTGGAACTGCAGAGGCGGCTGGAGGC...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp TTGTATATTGCAGGAGTTCCATCGGGATTCACAAAGGGCTGGCCTGTGTGTGGAGTTCATTTTCTGAGCTaGTCTGTCGACTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: LYIAGVPSGFTKGWPVCGVHFLS*SVDSQM
Trigger: CATCTGGGAGTCGACAGAGCAGCTCAGAAAATGAAC...TCCACACACAGGCCAGCCCTTTGTGAATCCCGATGGAACTCCTGCAATATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGATGTCGGAGTCTGTGCTaGTCCAGGCCCTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARCRSLC*SRPFGG
Trigger: ACCACCAAAGGGCCTGGAGCAGCACAGACTCCGACA...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTCTGAGGAGCCTGCACTaGTGGAAGACTCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARALRSLH*WKTRNL
Trigger: CAGGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAG...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGACTGAGGAGCCTGCACTaGTGGAAGACTCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARLRSLH*WKTRNL
Trigger: CAGGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAG...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGTGCGGTGGCTGGACCTaGTGTTGGGGCTGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVCGGWT*CWGCGE
Trigger: CTCCCCGCAGCCCCAACAGCAGGTCCAGCCACCGCA...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGTCTCCCCCGAGGACTaGCGGCTCAGGGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLVSPED*RLRVIW
Trigger: CCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGAC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAGCAGGCGGAGGCTGTTaGACAAATCCCTGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKAGGGC*TNPCGE
Trigger: CTCACCACAGGGATTTGTGCAACAGCCTCCGCCTGC...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATATACAGGCATCTGTaGAGGCGGAGGCTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSIYRHL*RRRLLH
Trigger: GTGCAACAGCCTCCGCCTGCACAGATGCCTGTATAT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp AATTTGACCTGCCAACCAGCATTGCTCATACTTGCACAGTTTGTTCTGCAGCTAATGGGCCGGTACTGTTaGGTGGTTGAGGTAGGGTAC +
Preference number: 4 (lower is better)
Translates to: NLTCQPALLILAQFVLQLMGRYC*VVEVGY
Trigger: GTACCCTACCTCAACCACGCAACAGTACCGGCCCAT...TAGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCACCTGCTTGCTGTGCTaGCTGTGGCATCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSTCLLC*LWHLLT
Trigger: AGTCAACAGATGCCACAGGCAGCACAGCAAGCAGGT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCGTAACCTGCTTGCTGTaGTGCCTGTGGCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSVTCLL*CLWHLL
Trigger: CAACAGATGCCACAGGCAGCACAGCAAGCAGGTTAC...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGACTGGCTGGTAACCTaGTTGCTGTGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARDWLVT*LLCCLW
Trigger: CCACAGGCAGCACAGCAAGCAGGTTACCAGCCAGTC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCTCATGGGAAAGTGCTaGGTTGGAGACACAGGTAGG +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSLMGKC*VGDTGR
Trigger: CCTACCTGTGTCTCCAACGCAGCACTTTCCCATGAG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATGCGGGATTCTCGCTTTaGTGCGCTCTGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYAGFSL*CALLSK
Trigger: CTTTGAGAGCAGAGCGCAGCAAAGCGAGAATCCCGC...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCTCCTGCTGTAGGTCTTaGCGACTTACTAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSSCCRS*RLTSGF
Trigger: GAAGCCGCTAGTAAGTCGCCAAGACCTACAGCAGGA...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTTGCCGTTCTCTGGAGTaGCCGTCTCCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGICRSLE*PSPAQS
Trigger: GGACTGAGCAGGAGACGGCCACTCCAGAGAACGGCA...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCTGCCGTTCTCTGGAGTaGCCGTCTCCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVCRSLE*PSPAQS
Trigger: GGACTGAGCAGGAGACGGCCACTCCAGAGAACGGCA...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCTCCAGGCCCTTTGGTaGTCAGACCACTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSLQALW*SDHLSS
Trigger: TGAACTCAAGTGGTCTGACCACCAAAGGGCCTGGAG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATATGTGCTCTGGAGAGGTaGATGGGTGCGGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCICALER*MGAGQR
Trigger: TCGCTGTCCCGCACCCATCCACCTCTCCAGAGCACA...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTATAAGGCACACAGCCTaGAGAGCCAGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAIRHTA*RASCHT
Trigger: GGTGTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTAT...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGGGACTGCCCCACCATaGCGCTTCGCAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVGTAPP*RFAGAA
Trigger: AGCAGCCCCTGCGAAGCGCCATGGTGGGGCAGTCCC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACTGCTGGGCCGGCTGTaGCATAAGGGAGGATGGGTA +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCILLGRL*HKGGWV
Trigger: TACCCATCCTCCCTTATGCCACAGCCGGCCCAGCAG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAAGGCGATTACATAGCTaGGCTGCTGGGCCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIRRLHS*AAGPAV
Trigger: CACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCT...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCCTGTAGGAAGCTGCTaGCCTGTAGAGGCGATTACA +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSPVGSC*PVEAIT
Trigger: TGTAATCGCCTCTACAGGCCAGCAGCTTCCTACAGG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAGCTGGAGGGGCAGTGTaGGCCAATCAGCCTAAGGTT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKAGGAV*ANQPKV
Trigger: AACCTTAGGCTGATTGGCCCACACTGCCCCTCCAGC...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAGGATATTGCACTGACTaGGAGGAAGCCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKGYCTD*EEACSP
Trigger: GGGGCTGCAGGCTTCCTCCCAGTCAGTGCAATATCC...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGGATATTGCACTGACTaGGAGGAAGCCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARGYCTD*EEACSP
Trigger: GGGGCTGCAGGCTTCCTCCCAGTCAGTGCAATATCC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
3UTR CAA 72 bp GTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTaGGTTATTTATCACGTTCTGACTCTGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VGNHHALHRSSL*VIYHVLTLRWL
Trigger: CAGCCACCTCAGAGTCAGAACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
3UTR CAA 72 bp TGGGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTaGTTGGTTATTTATCACGTTCTGACTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WVGNHHALHRSS*LVIYHVLTLRW
Trigger: CCACCTCAGAGTCAGAACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp GGTTGTATATTGCAGGAGTTCCATCGGGATTCACAAAGGGCTGGCCTGTGTGTGCATCCTCTGATACGATaGCATCTGAGGGAACTTTTT +
Preference number: 4 (lower is better)
Translates to: GCILQEFHRDSQRAGLCVHPLIR*HLRELF
Trigger: AAAAAGTTCCCTCAGATGTCATCGTATCAGAGGATG...CACACACAGGCCAGCCCTTTGTGAATCCCGATGGAACTCCTGCAATATACAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR TCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATATGGGTAGACAGGACCTaGTGGGGGTTCAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIWVDRT*WGFRSL
Trigger: GAGACTCCTGAACCCCCATCAGGTCCTGTCTACCCA...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTCCTTGGAATCCCTGTTaGCCAGACAAGACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAPWNPC*PDKTGW
Trigger: CCAGCCAGTCTTGTCTGGTCAACAGGGATTCCAAGG...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGATTGGCTGTTGGTATaGCTGCTGGGGCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARDWLLV*LLGQSL
Trigger: CAAGGACTGCCCCAGCAGTCATACCAACAGCCAATC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAGATTGGCTGTTGGTATaGCTGCTGGGGCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKDWLLV*LLGQSL
Trigger: CAAGGACTGCCCCAGCAGTCATACCAACAGCCAATC...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGCTGGGAGTGACCCTTaGCCTGCCTGGTTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAAGSDP*PAWLGS
Trigger: GCTACCTAACCAGGCAGGTCAAGGGTCACTCCCAGC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTGAGGGGTGGGCGGTGTaGCATTACAGTAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAEGWAV*HYSKQA
Trigger: TGCCTGTTTACTGTAATGTCACACCGCCCACCCCTC...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGAGGGGTGGGCGGTGTaGCATTACAGTAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTAREGWAV*HYSKQA
Trigger: TGCCTGTTTACTGTAATGTCACACCGCCCACCCCTC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAAGCCTAAGGTTGTTCTaGGGGGTGGGCGGTGTGACA +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCISLRLF*GVGGVT
Trigger: TGTCACACCGCCCACCCCTCAGAACAACCTTAGGCT...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCAGAGCTCTCAGAATTTaGCCTGCCAACCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSRALRI*PANQHC
Trigger: GCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGTGCATTTTGGGGAGCTaGGAGGTAAGACATCTCCAA +
Preference number: 4 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKCILGS*EVRHLQ
Trigger: TTGGAGATGTCTTACCTCTCAGCTCCCCAAAATGCA...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTGCTGGATATTGCACTaGCTGGGAGGAAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARACWILH*LGGSLQ
Trigger: CTGCAGGCTTCCTCCCAGTCAGTGCAATATCCAGCA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGATGCTGGATATTGCACTaGCTGGGAGGAAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARCWILH*LGGSLQ
Trigger: CTGCAGGCTTCCTCCCAGTCAGTGCAATATCCAGCA...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGTTGGTGCAGAATTCCTaGTGTAGGTCTTGGCGACTT +
Preference number: 4 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKLVQNS*CRSWRL
Trigger: AAGTCGCCAAGACCTACAGCAGGAATTCTGCACCAA...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR GCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGTCCTTCCTCTGCTATTaGCTGATTCAGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKSFLCY*LIQVSL
Trigger: CAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGA...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCAGTCCCTCCTTCCTCTaGTATTGCCTGATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSSPSFL*YCLIQV
Trigger: GACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTGCCTCCAGCCGCCTCTaGAGTTCCAGTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFASSRL*SSSFSS
Trigger: AGAGGAGAAACTGGAACTGCAGAGGCGGCTGGAGGC...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGCACAGACAGCAAGGCTaGGAGTCAGTTTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: FGELRGKTSPTRKERGYLHRQQG*ESVYLF
Trigger: GAAAAGGTAAACTGACTCGCAGCCTTGCTGTCTGTG...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp GGTTGTATATTGCAGGAGTTCCATCGGGATTCACAAAGGGCTGGCCTGTGTGTGCAATCCAAAATAAGCTaGCACTCGATGGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: GCILQEFHRDSQRAGLCVQSKIS*HSMDKH
Trigger: ATGCTTGTCCATCGAGTGGCAGCTTATTTTGGATTG...CACACACAGGCCAGCCCTTTGTGAATCCCGATGGAACTCCTGCAATATACAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR GCA 90 bp CCAAGAGCCTACTGTTTTCCACAAAAAGGCTTTCCTGGGAGCAAACTGAATCGTCTGAGCCATCTCTGTTaGCCCGAAAGAGCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: PRAYCFPQKGFPGSKLNRLSHLC*PERAVF
Trigger: AAAGACAGCTCTTTCGGGGCAACAGAGATGGCTCAG...ACGATTCAGTTTGCTCCCAGGAAAGCCTTTTTGTGGAAAACAGTAGGCTCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAAACTGTCGGAGTCTGTaGTGCTCCAGGCCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARNCRSL*CSRPFG
Trigger: ACCAAAGGGCCTGGAGCAGCACAGACTCCGACAGTT...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAGGAAGACTCGGAACCTaGTTTGGACAGCTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKGRLGT*FGQLPG
Trigger: ACCGGGAAGCTGTCCAAAGCAGGTTCCGAGTCTTCC...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACTGAGGAGCCTGCACTaGTGGAAGACTCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCILRSLH*WKTRNL
Trigger: CAGGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAGGATGTAGCTGGTGCTaGTGGGAGCAACCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLGCSWC*WEQPGP
Trigger: GGGGCCAGGTTGCTCCCAGCAGCACCAGCTACATCC...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGGAGGATGTAGCTGGTaGTGCTGGGAGCAACCTGGC +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAGGCSW*CWEQPG
Trigger: GCCAGGTTGCTCCCAGCAGCACCAGCTACATCCTCC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAAGGCGGGATGCCTGTTaGAGCTTCAAGTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARRRDAC*SFKWKE
Trigger: CTCCTTCCACTTGAAGCTGCAACAGGCATCCCGCCT...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAAGTGACCAGAGGGCCTaGCATCTGTGGCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLSDQRA*HLWLRW
Trigger: CCACCGCAGCCACAGATGGCAGGCCCTCTGGTCACT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACCTCCTGTAGGAAGCTaGTGGCCTGTAGAGGCGATT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKPPVGS*WPVEAI
Trigger: AATCGCCTCTACAGGCCAGCAGCTTCCTACAGGAGG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTATGGGCCGGTACTGTTaGGTGGTTGAGGTAGGGTAC +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAMGRYC*VVEVGY
Trigger: GTACCCTACCTCAACCACGCAACAGTACCGGCCCAT...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCAAGGCTGTCCTTCTCTaGCTGGCATTAGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCKAVLL*LALGVG
Trigger: CCCCACTCCTAATGCCAGGCAGAGAAGGACAGCCTT...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCTTTCTATCAACCCCCTaGTCCCACCACTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCFLSTP*SHHSSA
Trigger: GGCTGAGGAGTGGTGGGAGCAGGGGGTTGATAGAAA...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGCCACTCTCGCAGGCTaGCAGTCTGTGCGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPATLAG*QSVRWS
Trigger: AGACCAGCGCACAGACTGGCAGCCTGCGAGAGTGGC...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCGTAAAAGGAGCTTTCTaGAGTGTCGGCTGGGATCCC +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAVKGAF*SVGWDP
Trigger: GGGATCCCAGCCGACACTGCAGAAAGCTCCTTTTAC...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTGCACAAGAGGCAGATaGAGTTGTCCCATCCACACC +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCACTRGR*SCPIHT
Trigger: GGTGTGGATGGGACAACTGCATCTGCCTCTTGTGCA...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATTCCTGCTGTAGGTCTTaGCGACTTACTAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYSCCRS*RLTSGF
Trigger: GAAGCCGCTAGTAAGTCGCCAAGACCTACAGCAGGA...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR CCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTGCCGTTCTCTGGAGTaGCCGTCTCCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFCRSLE*PSPAQS
Trigger: GGACTGAGCAGGAGACGGCCACTCCAGAGAACGGCA...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp GTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAGAGTATTTCAATTAAATGCCGTTCTCTGGAGTaGCCGTCTCCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: VLSMLSVSMRGIQSISIKCRSLE*PSPAQS
Trigger: GGACTGAGCAGGAGACGGCCACTCCAGAGAACGGCA...TTTAATTGAAATACTCTGAATTCCCCTCATGGAAACAGAGAGCATTGAGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: FGELRGKTSPTRKERGYLFHLLV*QKIPHR
Trigger: TCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAA...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGACTGCTCCAGGCCCTTTaGTGGTCAGACCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARLLQAL*WSDHLS
Trigger: ACTCAAGTGGTCTGACCACCAAAGGGCCTGGAGCAG...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTACTCGGAACCTGCTTTaGACAGCTTCCCGGTACTCC +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARATRNLL*TASRYS
Trigger: GGAGTACCGGGAAGCTGTCCAAAGCAGGTTCCGAGT...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAAGGAGCCTGCACTGCTaGAAGACTCGGAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKRSLHC*KTRNLL
Trigger: AAGCAGGTTCCGAGTCTTCCAGCAGTGCAGGCTCCT...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTCTCTGGAGAGGTGGATaGGTGCGGGACAGCGATCCT +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLALWRGG*VRDSDP
Trigger: AGGATCGCTGTCCCGCACCCATCCACCTCTCCAGAG...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACTGCTGGGAGCAACCTaGCCCCCTATTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKLLGAT*PPIPFS
Trigger: AGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCAG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTGTAGCTGGTGCTGCTaGGAGCAACCTGGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLACSWCC*EQPGPL
Trigger: TAGGGGGCCAGGTTGCTCCCAGCAGCACCAGCTACA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTGGGGCTGCTGACTGGTaGGTGGGTTGTATATTGCAG +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAGAADW*VGCILQ
Trigger: CTGCAATATACAACCCACCCACCAGTCAGCAGCCCC...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGGGGCTGCTGACTGGTaGGTGGGTTGTATATTGCAG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARGAADW*VGCILQ
Trigger: CTGCAATATACAACCCACCCACCAGTCAGCAGCCCC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCAGGGGCTGCTGACTaGTGGGTGGGTTGTATATTG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARAGAAD*WVGCIL
Trigger: CAATATACAACCCACCCACCAGTCAGCAGCCCCTGC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTATGTGGTGGCTGCTGTTaGGACTGCCCCACCATGGCG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLCGGCC*DCPTMA
Trigger: CGCCATGGTGGGGCAGTCCCAACAGCAGCCACCACA...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACGGCTCAGGGTCATCTaGCCAAACTGTGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKRLRVI*PNCVAT
Trigger: TGTGGCAACACAGTTTGGCCAGATGACCCTGAGCCG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAACTGAACCGGGGCCATaGGCCGGTACTGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLTEPGP*AGTVAW
Trigger: CCACGCAACAGTACCGGCCCATGGCCCCGGTTCAGT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAACTGAACCGGGGCCATaGGCCGGTACTGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLTEPGP*AGTVAW
Trigger: CCACGCAACAGTACCGGCCCATGGCCCCGGTTCAGT...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTTGGTTATTTATCACGTTTGACCAGACAAGACTaGCTGGTAACCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GRKPSRFAPEFLVGYLSRLTRQD*LVTCLL
Trigger: CAGCAAGCAGGTTACCAGCCAGTCTTGTCTGGTCAA...ACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTGCTCCTGTCAGTTGCTaGTGCGACAAGATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLAPVSC*CDKILW
Trigger: CCACAGGATCTTGTCGCACCAGCAACTGACAGGAGC...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396481.6
ENST00000441454.5
CDS-3UTR CCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTGGAGTGGGGGACAACTaGGGCATTACTTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIGVGDN*GITSPR
Trigger: CCTGGGAGAAGTAATGCCCCAGTTGTCCCCCACTCC...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATTCCTCTGCTATTGCCTaGTTCAGGTCTCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYSSAIA*FRSPCS
Trigger: TGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGA...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACCCAGATGTTCTCCCTaGGCCATCTCTGTTGCCCCG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLPRCSP*AISVAP
Trigger: CGGGGCAACAGAGATGGCTCAGGGAGAACATCTGGG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000187397.8
ENST00000417925.5
CDS-3UTR TCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACCCAGATGTTCTCCCTaGGCCATCTCTGTTGCCCCG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLPRCSP*AISVAP
Trigger: CGGGGCAACAGAGATGGCTCAGGGAGAACATCTGGG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000187397.8
ENST00000417925.5
CDS-3UTR TCA 90 bp AATTTGACCTGCCAACCAGCATTGCTCATACTTGCACAGTTTGTTCTGCAGCTAGGTGGTCAGACCACTTaGGTTCATTTTCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NLTCQPALLILAQFVLQLGGQTT*VHFLSC
Trigger: GCAGCTCAGAAAATGAACTCAAGTGGTCTGACCACC...TAGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACTTCGCAGGGGCTGCTaGCTGGTGGGTGGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLLRRGC*LVGGLY
Trigger: ATACAACCCACCCACCAGTCAGCAGCCCCTGCGAAG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATGCTGGGGCAGTCCTTaGGAACCCTGGGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLCWGSP*EPWVIG
Trigger: GCCAATGACCCAGGGTTCTCAAGGACTGCCCCAGCA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTATCCAGTGGCTGGGAGTaGCCCTTGACCTGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLSSGWE*PLTCLV
Trigger: AACCAGGCAGGTCAAGGGTCACTCCCAGCCACTGGA...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAGCCTAAGGTTGTTCTaGGGGGTGGGCGGTGTGACA +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLASLRLF*GVGGVT
Trigger: TGTCACACCGCCCACCCCTCAGAACAACCTTAGGCT...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCATCACGTTCACAGCTTaGTCCAGCTCCACCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCITFTA*SSSTCL
Trigger: GAGACAGGTGGAGCTGGATCAAGCTGTGAACGTGAT...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000432682.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCAGTCCCTCCTTCCTCTaGTATTGCCTGATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCASPSFL*YCLIQV
Trigger: GACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACT...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGGAGTGGCCGTCTCCTaGTCAGTCCCTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLGVAVS*SVPPSS
Trigger: AGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTCC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTGCCTCCAGCCGCCTCTaGAGTTCCAGTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFASSRL*SSSFSS
Trigger: AGAGGAGAAACTGGAACTGCAGAGGCGGCTGGAGGC...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGGAGAGGTGGATGGGTaGGGGACAGCGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVGEVDG*GTAILR
Trigger: CCTCAGGATCGCTGTCCCGCACCCATCCACCTCTCC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGGATGTAGCTGGTGCTaGTGGGAGCAACCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVGCSWC*WEQPGP
Trigger: GGGGCCAGGTTGCTCCCAGCAGCACCAGCTACATCC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAGGAGGATGTAGCTGGTaGTGCTGGGAGCAACCTGGC +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLGGCSW*CWEQPG
Trigger: GCCAGGTTGCTCCCAGCAGCACCAGCTACATCCTCC...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAAGGCGGGATGCCTGTTaGAGCTTCAAGTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIRRDAC*SFKWKE
Trigger: CTCCTTCCACTTGAAGCTGCAACAGGCATCCCGCCT...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGAGTGACCAGAGGGCCTaGCATCTGTGGCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVSDQRA*HLWLRW
Trigger: CCACCGCAGCCACAGATGGCAGGCCCTCTGGTCACT...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTATATACAGGCATCTGTaGAGGCGGAGGCTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAIYRHL*RRRLLH
Trigger: GTGCAACAGCCTCCGCCTGCACAGATGCCTGTATAT...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCCTGCCAACCAGCATTaGTCATACTTGCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSPANQH*SYLHSL
Trigger: CAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTCCTGTCAGTTGCTGGTaGGACAAGATCCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLPVSCW*DKILWK
Trigger: CTTCCACAGGATCTTGTCGCACCAGCAACTGACAGG...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396481.6
ENST00000441454.5
CDS-3UTR GCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCTTTCTATCAACCCCCTaGTCCCACCACTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCFLSTP*SHHSSA
Trigger: GGCTGAGGAGTGGTGGGAGCAGGGGGTTGATAGAAA...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTTTTCTATCAACCCCCTaGTCCCACCACTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSFLSTP*SHHSSA
Trigger: GGCTGAGGAGTGGTGGGAGCAGGGGGTTGATAGAAA...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTGCACAAGAGGCAGATaGAGTTGTCCCATCCACACC +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYCTRGR*SCPIHT
Trigger: GGTGTGGATGGGACAACTGCATCTGCCTCTTGTGCA...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTTATGCCCCAAGGCATaGACAAGAGGCAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCALCPKA*TRGRCS
Trigger: ACTGCATCTGCCTCTTGTGCATGCCTTGGGGCATAA...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438071.1
CDS-3UTR CCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTCCTGCTGTAGGTCTTaGCGACTTACTAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLSCCRS*RLTSGF
Trigger: GAAGCCGCTAGTAAGTCGCCAAGACCTACAGCAGGA...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATCCTGCTGTAGGTCTTaGCGACTTACTAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKSCCRS*RLTSGF
Trigger: GAAGCCGCTAGTAAGTCGCCAAGACCTACAGCAGGA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATGCCGTTCTCTGGAGTaGCCGTCTCCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLCRSLE*PSPAQS
Trigger: GGACTGAGCAGGAGACGGCCACTCCAGAGAACGGCA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACTCCAGGCCCTTTGGTaGTCAGACCACTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKLQALW*SDHLSS
Trigger: TGAACTCAAGTGGTCTGACCACCAAAGGGCCTGGAG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACTGCTCCAGGCCCTTTaGTGGTCAGACCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCILLQAL*WSDHLS
Trigger: ACTCAAGTGGTCTGACCACCAAAGGGCCTGGAGCAG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATATCGCCGTCTTGGTCATaGCGGGCTTTAGATTGCGGT +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCISPSWS*RALDCG
Trigger: ACCGCAATCTAAAGCCCGCCATGACCAAGACGGCGA...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACTCTGGAGAGGTGGATaGGTGCGGGACAGCGATCCT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLLWRGG*VRDSDP
Trigger: AGGATCGCTGTCCCGCACCCATCCACCTCTCCAGAG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATGTAGCTGGTGCTGCTaGGAGCAACCTGGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLCSWCC*EQPGPL
Trigger: TAGGGGGCCAGGTTGCTCCCAGCAGCACCAGCTACA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGAAGGAGGATGTAGCTaGTGCTGCTGGGAGCAACCT +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIEGGCS*CCWEQP
Trigger: AGGTTGCTCCCAGCAGCACCAGCTACATCCTCCTTC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAGGGCTGGCCTGTGTGTaGATTAAGAAGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKGLACV*IKKDAS
Trigger: GGAAGCATCCTTCTTAATCCACACACAGGCCAGCCC...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATTGCTGTGCTGCCTGTaGCATCTGTTGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKLLCCL*HLLTPL
Trigger: CAGAGGAGTCAACAGATGCCACAGGCAGCACAGCAA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTTGCTGTGCTGCCTGTaGCATCTGTTGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARALLCCL*HLLTPL
Trigger: CAGAGGAGTCAACAGATGCCACAGGCAGCACAGCAA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTAAACAGGCATTCCAGTaGCTGGGAGTGACCCTTGAC +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAKQAFQ*LGVTLD
Trigger: GTCAAGGGTCACTCCCAGCCACTGGAATGCCTGTTT...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTGCTCCTGTCAGTTGCTaGTGCGACAAGATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSAPVSC*CDKILW
Trigger: CCACAGGATCTTGTCGCACCAGCAACTGACAGGAGC...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441454.5
3UTR CAA 72 bp TCTGAAGAAATGTACCACAGCCAGAGCTCTCAGAATTaGACCTGCCAACCAGCATTGCTCATACTTGCACAG +
Preference number: 4 (lower is better)
Translates to: SEEMYHSQSSQN*TCQPALLILAQ
Trigger: CTGTGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTGGCTGTGGTACATTTCTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGATGCTTCTTTTATTGCTaGGTGAGGCGCTCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARCFFYC*VRRSLL
Trigger: AAGGAGCGAGCGCCTCACTCAGCAATAAAAGAAGCA...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR TCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTCCTCTGCTATTGCCTaGTTCAGGTCTCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYSSAIA*FRSPCS
Trigger: TGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGA...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTCCTCTGCTATTGCCTaGTTCAGGTCTCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLSSAIA*FRSPCS
Trigger: TGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGA...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCTCCTCTGCTATTGCCTaGTTCAGGTCTCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCSSAIA*FRSPCS
Trigger: TGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGA...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTCCTCTGCTATTGCCTaGTTCAGGTCTCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARASSAIA*FRSPCS
Trigger: TGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGACCTTTTCCTGCTCCTaGCTTGGATTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: FGELRGKTSPTRKERGYLTFSCS*LGFSSF
Trigger: GAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGT...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTCTTGAGTTCATTTTCTaGGCTGCTCTGTCGACTCCC +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARALEFIF*AALSTP
Trigger: GGGAGTCGACAGAGCAGCTCAGAAAATGAACTCAAG...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGACTTGAGTTCATTTTCTaGGCTGCTCTGTCGACTCCC +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARLEFIF*AALSTP
Trigger: GGGAGTCGACAGAGCAGCTCAGAAAATGAACTCAAG...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTGGTGGTCAGACCACTTaGGTTCATTTTCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAGGQTT*VHFLSC
Trigger: GCAGCTCAGAAAATGAACTCAAGTGGTCTGACCACC...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGATTGGCTGTTGGTATaGCTGCTGGGGCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLADWLLV*LLGQSL
Trigger: CAAGGACTGCCCCAGCAGTCATACCAACAGCCAATC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGTCCAGTGGCTGGGAGTaGCCCTTGACCTGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVSSGWE*PLTCLV
Trigger: AACCAGGCAGGTCAAGGGTCACTCCCAGCCACTGGA...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAAGAGCTCTCAGAATTTaGCCTGCCAACCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARRALRI*PANQHC
Trigger: GCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCT...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTAGAGCTCTCAGAATTTaGCCTGCCAACCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARARALRI*PANQHC
Trigger: GCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCT...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTGCATTTTGGGGAGCTaGGAGGTAAGACATCTCCAA +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCACILGS*EVRHLQ
Trigger: TTGGAGATGTCTTACCTCTCAGCTCCCCAAAATGCA...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGATTTTACTTTTGTCTTaGCTGCACCCAGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: FGELRGKTSPTRKERGYLILLLS*LHPASD
Trigger: ATCAGAGGCTGGGTGCAGTCAAGACAAAAGTAAAAT...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAGCAAACCTGAATAGCTaGCAGCAACCACATCCACCT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKANLNS*QQPHPP
Trigger: AGGTGGATGTGGTTGCTGTCAGCTATTCAGGTTTGC...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444190.5
CDS-3UTR TCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCTACATCTTCAGGAGGTaGTCAGGTAGCAAACCTGAA +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSYIFRR*SGSKPE
Trigger: TTCAGGTTTGCTACCTGATCACCTCCTGAAGATGTA...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444190.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCGAATGCCCATCTCCATaGGATTCCCTTACACAGTGT +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAECPSP*DSLTQC
Trigger: ACACTGTGTAAGGGAATCGCATGGAGATGGGCATTC...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
CDS-3UTR GCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATTAACAGTTCGGAATaGCCATCTCCATGCGATTCC +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSINSSE*PSPCDS
Trigger: GGAATCGCATGGAGATGGGCATTCCGAACTGTTAAT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGTTTTATGCCCTTTGGTaGAGAATTCCTGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: FGELRGKTSPTRKERGYLFYALW*RIPAVG
Trigger: ACCTACAGCAGGAATTCTGCACCAAAGGGCATAAAA...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTCCTTCCTCTGCTATTaGCTGATTCAGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCASFLCY*LIQVSL
Trigger: CAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGA...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACAGTCCCTCCTTCCTCTaGTATTGCCTGATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYSPSFL*YCLIQV
Trigger: GACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACT...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTGGAGTGGCCGTCTCCTaGTCAGTCCCTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPGVAVS*SVPPSS
Trigger: AGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTCC...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAGCCTCCAGCCGCCTCTaGAGTTCCAGTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLASSRL*SSSFSS
Trigger: AGAGGAGAAACTGGAACTGCAGAGGCGGCTGGAGGC...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCCTCCAGCCGCCTCTaGAGTTCCAGTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLASSRL*SSSFSS
Trigger: AGAGGAGAAACTGGAACTGCAGAGGCGGCTGGAGGC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp TCCCTGAGCCATCTCTGTTGCCCCGAAAGAGCTGTCTTTTCTTATAGGTCTCATCAATCCAAAATAAGCTaGCACTCGATGGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: SLSHLCCPERAVFSYRSHQSKIS*HSMDKH
Trigger: ATGCTTGTCCATCGAGTGGCAGCTTATTTTGGATTG...ATGAGACCTATAAGAAAAGACAGCTCTTTCGGGGCAACAGAGATGGCTCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTCTGAGCCATCTCTGTTaGCCCGAAAGAGCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARALSHLC*PERAVF
Trigger: AAAGACAGCTCTTTCGGGGCAACAGAGATGGCTCAG...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000187397.8
ENST00000417925.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATGTCGGAGTCTGTGCTaGTCCAGGCCCTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLCRSLC*SRPFGG
Trigger: ACCACCAAAGGGCCTGGAGCAGCACAGACTCCGACA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGGAAGACTCGGAACCTaGTTTGGACAGCTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAGRLGT*FGQLPG
Trigger: ACCGGGAAGCTGTCCAAAGCAGGTTCCGAGTCTTCC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGGAGGATGTAGCTGGTaGTGCTGGGAGCAACCTGGC +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVGGCSW*CWEQPG
Trigger: GCCAGGTTGCTCCCAGCAGCACCAGCTACATCCTCC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAGCAGGCGGAGGCTGTTaGACAAATCCCTGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLAGGGC*TNPCGE
Trigger: CTCACCACAGGGATTTGTGCAACAGCCTCCGCCTGC...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTATGGGCCGGTACTGTTaGGTGGTTGAGGTAGGGTAC +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAMGRYC*VVEVGY
Trigger: GTACCCTACCTCAACCACGCAACAGTACCGGCCCAT...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAGACTGGCTGGTAACCTaGTTGCTGTGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLDWLVT*LLCCLW
Trigger: CCACAGGCAGCACAGCAAGCAGGTTACCAGCCAGTC...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGACTGGCTGGTAACCTaGTTGCTGTGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLDWLVT*LLCCLW
Trigger: CCACAGGCAGCACAGCAAGCAGGTTACCAGCCAGTC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GCAGGAACAAAGCACCATTTACACCTTATTTCTCTGCACCAATTGTATGGATACCAAGCTCCTGTCAGTTaGTGGTGCGACAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: AGTKHHLHLISLHQLYGYQAPVS*WCDKIL
Trigger: CAGGATCTTGTCGCACCAGCAACTGACAGGAGCTTG...GTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR GCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTTTCTATCAACCCCCTaGTCCCACCACTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFFLSTP*SHHSSA
Trigger: GGCTGAGGAGTGGTGGGAGCAGGGGGTTGATAGAAA...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
46% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCGGTAGCACGGCCACTTaGTTATATGTGTGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAGSTAT*LYVCLD
Trigger: ATCCAGACACACATATAAGCAAGTGGCCGTGCTACC...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGACTGGCCAAACTGTGTTaGCACATCATCTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARLAKLC*HIISHG
Trigger: CCCATGAGAGATGATGTGGCAACACAGTTTGGCCAG...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCCTGTGTGCCTCTCCCTaGCTACTTAATGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCLCASP*LLNALA
Trigger: AGCGAGAGCATTAAGTAGGCAGGGAGAGGCACACAG...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR GCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTGGATTCTCGCTTTGCTaGGCTCTGCTCTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSGFSLC*ALLSKL
Trigger: CAGCTTTGAGAGCAGAGCGCAGCAAAGCGAGAATCC...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTCCTGCTGTAGGTCTTaGCGACTTACTAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFSCCRS*RLTSGF
Trigger: GAAGCCGCTAGTAAGTCGCCAAGACCTACAGCAGGA...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGTGCCGTTCTCTGGAGTaGCCGTCTCCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVCRSLE*PSPAQS
Trigger: GGACTGAGCAGGAGACGGCCACTCCAGAGAACGGCA...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTTGCCGTTCTCTGGAGTaGCCGTCTCCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPCRSLE*PSPAQS
Trigger: GGACTGAGCAGGAGACGGCCACTCCAGAGAACGGCA...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAFHLLV*QKIPHR
Trigger: TCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAA...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYFHLLV*QKIPHR
Trigger: TCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAA...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAGCTTTAGATTGCGGTTaGAACTGTCGGAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKALDCG*NCRSLC
Trigger: GCACAGACTCCGACAGTTCCAACCGCAATCTAAAGC...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTGCTTTAGATTGCGGTTaGAACTGTCGGAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAALDCG*NCRSLC
Trigger: GCACAGACTCCGACAGTTCCAACCGCAATCTAAAGC...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGACAAAACTCGCCGTCTTaGTCATGGCGGGCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARQNSPS*SWRALD
Trigger: ATCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTG...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTACTCGGAACCTGCTTTaGACAGCTTCCCGGTACTCC +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLATRNLL*TASRYS
Trigger: GGAGTACCGGGAAGCTGTCCAAAGCAGGTTCCGAGT...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGTGTGCTCTGGAGAGGTaGATGGGTGCGGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVCALER*MGAGQR
Trigger: TCGCTGTCCCGCACCCATCCACCTCTCCAGAGCACA...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAATAAGGCACACAGCCTaGAGAGCCAGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLIRHTA*RASCHT
Trigger: GGTGTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTAT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGAAGGAGGATGTAGCTaGTGCTGCTGGGAGCAACCT +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAEGGCS*CCWEQP
Trigger: AGGTTGCTCCCAGCAGCACCAGCTACATCCTCCTTC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGCAGGGGCTGCTGACTaGTGGGTGGGTTGTATATTG +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAAGAAD*WVGCIL
Trigger: CAATATACAACCCACCCACCAGTCAGCAGCCCCTGC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGAGGCGATTACATAGCTaGGCTGCTGGGCCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVRRLHS*AAGPAV
Trigger: CACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCT...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGATTGACCAGACAAGACTaGCTGGTAACCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARLTRQD*LVTCLL
Trigger: CAGCAAGCAGGTTACCAGCCAGTCTTGTCTGGTCAA...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAAAACAGGCATTCCAGTaGCTGGGAGTGACCCTTGAC +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIKQAFQ*LGVTLD
Trigger: GTCAAGGGTCACTCCCAGCCACTGGAATGCCTGTTT...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGGAGGGGCAGTGTaGGCCAATCAGCCTAAGGTT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLAGGAV*ANQPKV
Trigger: AACCTTAGGCTGATTGGCCCACACTGCCCCTCCAGC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGTTTTGTAAGTGCCGGTaGTACCTAATGAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: FGELRGKTSPTRKERGYLFCKCR*YLMKAL
Trigger: CAATGCCTTCATTAGGTACCACCGGCACTTACAAAA...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTCTTTTATTGCTGAGTaGGGCGCTCGCTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARASFIAE*GARSFI
Trigger: AATGAAGGAGCGAGCGCCTCACTCAGCAATAAAAGA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR TCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGATTCCCTTACACAGTGTaGCACATCGTCAACCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARFPYTV*HIVNLS
Trigger: GGAAAGGTTGACGATGTGTCACACTGTGTAAGGGAA...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR TCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATATCCTCTGCTATTGCCTaGTTCAGGTCTCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCISSAIA*FRSPCS
Trigger: TGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGA...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTCCTCTGCTATTGCCTaGTTCAGGTCTCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFSSAIA*FRSPCS
Trigger: TGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGA...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCACCTTTTCCTGCTCCTaGCTTGGATTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSTFSCS*LGFSSF
Trigger: GAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACTTGAGTTCATTTTCTaGGCTGCTCTGTCGACTCCC +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCILEFIF*AALSTP
Trigger: GGGAGTCGACAGAGCAGCTCAGAAAATGAACTCAAG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGGTGGTCAGACCACTTaGGTTCATTTTCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIGGQTT*VHFLSC
Trigger: GCAGCTCAGAAAATGAACTCAAGTGGTCTGACCACC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACATCATCTCTCTGAGTaGCCAGAGGGCCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLHHLSE*PEGLPS
Trigger: AGATGGCAGGCCCTCTGGTCACTCAGAGAGATGATG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR TCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACCTTGGAATCCCTGTTaGCCAGACAAGACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLPWNPC*PDKTGW
Trigger: CCAGCCAGTCTTGTCTGGTCAACAGGGATTCCAAGG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACCTTGGAATCCCTGTTaGCCAGACAAGACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLPWNPC*PDKTGW
Trigger: CCAGCCAGTCTTGTCTGGTCAACAGGGATTCCAAGG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAGATTGGCTGTTGGTATaGCTGCTGGGGCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLDWLLV*LLGQSL
Trigger: CAAGGACTGCCCCAGCAGTCATACCAACAGCCAATC...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGTCAAAAGAGAGCCTTTaGGGAAAATTCAGCACTACT +
Preference number: 4 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKSKESL*GKFSTT
Trigger: AGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGA...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGTCAAAAGAGAGCCTTTaGGGAAAATTCAGCACTACT +
Preference number: 4 (lower is better)
Translates to: FGELRGKTSPTRKERGYLSKESL*GKFSTT
Trigger: AGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGA...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTGCATTTTGGGGAGCTaGGAGGTAAGACATCTCCAA +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLCILGS*EVRHLQ
Trigger: TTGGAGATGTCTTACCTCTCAGCTCCCCAAAATGCA...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCTGCATTTTGGGGAGCTaGGAGGTAAGACATCTCCAA +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCCILGS*EVRHLQ
Trigger: TTGGAGATGTCTTACCTCTCAGCTCCCCAAAATGCA...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp GTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAGAGTATTTCAATTAAAATCACGTTCACAGCTTaGTCCAGCTCCACCTGTCTC +
Preference number: 4 (lower is better)
Translates to: VLSMLSVSMRGIQSISIKITFTA*SSSTCL
Trigger: GAGACAGGTGGAGCTGGATCAAGCTGTGAACGTGAT...TTTAATTGAAATACTCTGAATTCCCCTCATGGAAACAGAGAGCATTGAGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396482.6
ENST00000412048.5
CDS-3UTR TCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCATAGTAATGGCCACTaGAAGATAGCCTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCHSNGH*KIACPC
Trigger: GCATGGACAGGCTATCTTTCAGTGGCCATTACTATG...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATAACTTAAGGACAGACTaGACCATCAGGTATGGGTCT +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYNLRTD*TIRYGS
Trigger: AGACCCATACCTGATGGTTCAGTCTGTCCTTAAGTT...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACACACATCGTCAACCTTaGTCGAACTGTGGATATCCC +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYTHRQP*SNCGYP
Trigger: GGGATATCCACAGTTCGATCAAGGTTGACGATGTGT...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGAATGCCCATCTCCATaGGATTCCCTTACACAGTGT +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARECPSP*DSLTQC
Trigger: ACACTGTGTAAGGGAATCGCATGGAGATGGGCATTC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCATTAACAGTTCGGAATaGCCATCTCCATGCGATTCC +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAINSSE*PSPCDS
Trigger: GGAATCGCATGGAGATGGGCATTCCGAACTGTTAAT...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
CDS-3UTR GCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATTGGTGCAGAATTCCTaGTGTAGGTCTTGGCGACTT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKLVQNS*CRSWRL
Trigger: AAGTCGCCAAGACCTACAGCAGGAATTCTGCACCAA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTGGTGCAGAATTCCTaGTGTAGGTCTTGGCGACTT +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYLVQNS*CRSWRL
Trigger: AAGTCGCCAAGACCTACAGCAGGAATTCTGCACCAA...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTTGGTGCAGAATTCCTaGTGTAGGTCTTGGCGACTT +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARALVQNS*CRSWRL
Trigger: AAGTCGCCAAGACCTACAGCAGGAATTCTGCACCAA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTCCTTCCTCTGCTATTaGCTGATTCAGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARASFLCY*LIQVSL
Trigger: CAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTCCTTCCTCTGCTATTaGCTGATTCAGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYSFLCY*LIQVSL
Trigger: CAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGA...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCTCCTTCCTCTGCTATTaGCTGATTCAGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCSFLCY*LIQVSL
Trigger: CAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGA...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATCCTTCCTCTGCTATTaGCTGATTCAGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKSFLCY*LIQVSL
Trigger: CAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp GCAGGAACAAAGCACCATTTACACCTTATTTCTCTGCACCAATTGTATGGATACAGTCCCTCCTTCCTCTaGTATTGCCTGATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: AGTKHHLHLISLHQLYGYSPSFL*YCLIQV
Trigger: GACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACT...GTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCAGTCCCTCCTTCCTCTaGTATTGCCTGATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVSPSFL*YCLIQV
Trigger: GACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACT...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTAGTCCCTCCTTCCTCTaGTATTGCCTGATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFSPSFL*YCLIQV
Trigger: GACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACT...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTGCCTCCAGCCGCCTCTaGAGTTCCAGTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPASSRL*SSSFSS
Trigger: AGAGGAGAAACTGGAACTGCAGAGGCGGCTGGAGGC...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTCACAGACAGCAAGGCTaGGAGTCAGTTTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLHRQQG*ESVYLF
Trigger: GAAAAGGTAAACTGACTCGCAGCCTTGCTGTCTGTG...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp CCAAGAGCCTACTGTTTTCCACAAAAAGGCTTTCCTGGGAGCAAACTGAATCGTTGTTCACAAAACCTTTaGTCTGGTATTCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PRAYCFPQKGFPGSKLNRCSQNL*SGILVL
Trigger: CAGCACCAGAATACCAGAGCAAAGGTTTTGTGAACA...ACGATTCAGTTTGCTCCCAGGAAAGCCTTTTTGTGGAAAACAGTAGGCTCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR GCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACTGAGCCATCTCTGTTaGCCCGAAAGAGCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCILSHLC*PERAVF
Trigger: AAAGACAGCTCTTTCGGGGCAACAGAGATGGCTCAG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000187397.8
ENST00000417925.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAAACTGTCGGAGTCTGTaGTGCTCCAGGCCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLNCRSL*CSRPFG
Trigger: ACCAAAGGGCCTGGAGCAGCACAGACTCCGACAGTT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTGGCGGGCTTTAGATTaGGGTTGGAACTGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAWRALD*GWNCRS
Trigger: ACTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAAGGCGGGATGCCTGTTaGAGCTTCAAGTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLRRDAC*SFKWKE
Trigger: CTCCTTCCACTTGAAGCTGCAACAGGCATCCCGCCT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATGCTTCCAGGCGGGATaGCTGTTGCAGCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLCFQAG*LLQLQV
Trigger: CACTTGAAGCTGCAACAGGCATCCCGCCTGGAAGCA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTATGCTTCCAGGCGGGATaGCTGTTGCAGCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLCFQAG*LLQLQV
Trigger: CACTTGAAGCTGCAACAGGCATCCCGCCTGGAAGCA...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACCTCCTGTAGGAAGCTaGTGGCCTGTAGAGGCGATT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLPPVGS*WPVEAI
Trigger: AATCGCCTCTACAGGCCAGCAGCTTCCTACAGGAGG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAATGGGCCGGTACTGTTaGGTGGTTGAGGTAGGGTAC +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLMGRYC*VVEVGY
Trigger: GTACCCTACCTCAACCACGCAACAGTACCGGCCCAT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTACCTGCTTGCTGTGCTaGCTGTGGCATCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLATCLLC*LWHLLT
Trigger: AGTCAACAGATGCCACAGGCAGCACAGCAAGCAGGT...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGTAACCTGCTTGCTGTaGTGCCTGTGGCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAVTCLL*CLWHLL
Trigger: CAACAGATGCCACAGGCAGCACAGCAAGCAGGTTAC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGACTGGCTGGTAACCTaGTTGCTGTGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVDWLVT*LLCCLW
Trigger: CCACAGGCAGCACAGCAAGCAGGTTACCAGCCAGTC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGAAACCATCACGCTTTaGACCGGAGTTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIETITL*TGVPCW
Trigger: CCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTCCTGCCAACCAGCATTaGTCATACTTGCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAPANQH*SYLHSL
Trigger: CAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGG...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAGAGTATTTCAATTAAACAAGCTCCTGTCAGTTaGTGGTGCGACAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: VLSMLSVSMRGIQSISIKQAPVS*WCDKIL
Trigger: CAGGATCTTGTCGCACCAGCAACTGACAGGAGCTTG...TTTAATTGAAATACTCTGAATTCCCCTCATGGAAACAGAGAGCATTGAGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396481.6
ENST00000441454.5
CDS-3UTR GCA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGTACTTTTGTCTTGACTaGACCCAGCCTCTGATAAAA +
Preference number: 4 (lower is better)
Translates to: FGELRGKTSPTRKERGYLYFCLD*TQPLIK
Trigger: TTTTATCAGAGGCTGGGTGCAGTCAAGACAAAAGTA...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCCGCACATTTTGTAAGTaGCGGTGGTACCTAATGAAG +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCARTFCK*RWYLMK
Trigger: CTTCATTAGGTACCACCGGCACTTACAAAATGTGCG...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTCTTCCCCTTCTGATGTaGTGTCAAATGAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLLPLLM*CQMRLM
Trigger: CATGAGCCTCATTTGACAGCACATCAGAAGGGGAAG...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432682.5
CDS-3UTR GCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTCTCAGGCTGTCTGACTaGTCCCACCTGTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPLRLSD*SHLSVA
Trigger: AGCTACGGACAGGTGGGAGCAGTCAGACAGCCTGAG...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR GCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTGGAGCACGCGAGTGTTaGTGTCTATCTTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIGAREC*CLSFCV
Trigger: CACACAGAAAGATAGACAGCAACACTCGCGTGCTCC...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR GCA 90 bp GCAGGAACAAAGCACCATTTACACCTTATTTCTCTGCACCAATTGTATGGATACCAAGTACCCAAGGCATaGACAAGAGGCAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: AGTKHHLHLISLHQLYGYQVPKA*TRGRCS
Trigger: ACTGCATCTGCCTCTTGTGCATGCCTTGGGTACTTG...GTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR GCA 90 bp CCAAGAGCCTACTGTTTTCCACAAAAAGGCTTTCCTGGGAGCAAACTGAATCGTATCCAGCTCAATTTGTaGACAACTGAAGGACAAAGC +
Preference number: 4 (lower is better)
Translates to: PRAYCFPQKGFPGSKLNRIQLNL*TTEGQS
Trigger: GCTTTGTCCTTCAGTTGTGCACAAATTGAGCTGGAT...ACGATTCAGTTTGCTCCCAGGAAAGCCTTTTTGTGGAAAACAGTAGGCTCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCAAGAGGGAAAGTCACTaGGAGATCAGCAATTTGCAA +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSKRESH*EISNLQ
Trigger: TTGCAAATTGCTGATCTCCCAGTGACTTTCCCTCTT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR CCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTCCTGCTGTAGGTCTTaGCGACTTACTAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFSCCRS*RLTSGF
Trigger: GAAGCCGCTAGTAAGTCGCCAAGACCTACAGCAGGA...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
CDS-3UTR CCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCFHLLV*QKIPHR
Trigger: TCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAA...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKFHLLV*QKIPHR
Trigger: TCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACTGCTCCAGGCCCTTTaGTGGTCAGACCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLLLQAL*WSDHLS
Trigger: ACTCAAGTGGTCTGACCACCAAAGGGCCTGGAGCAG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTATCGCCGTCTTGGTCATaGCGGGCTTTAGATTGCGGT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLSPSWS*RALDCG
Trigger: ACCGCAATCTAAAGCCCGCCATGACCAAGACGGCGA...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATCGCCGTCTTGGTCATaGCGGGCTTTAGATTGCGGT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLSPSWS*RALDCG
Trigger: ACCGCAATCTAAAGCCCGCCATGACCAAGACGGCGA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAAGGAGCCTGCACTGCTaGAAGACTCGGAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLRSLHC*KTRNLL
Trigger: AAGCAGGTTCCGAGTCTTCCAGCAGTGCAGGCTCCT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACCCTATTCCATTCTCTaGATAAGGCACACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIPYSIL*IRHTAW
Trigger: CCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACTGCTGGGAGCAACCTaGCCCCCTATTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLLLGAT*PPIPFS
Trigger: AGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCAG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACTGCTGGGAGCAACCTaGCCCCCTATTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLLLGAT*PPIPFS
Trigger: AGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCAG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATGTTGCAGCTTCAAGTaGAAGGAGGATGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKCCSFK*KEDVAG
Trigger: ACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTGTTGCAGCTTCAAGTaGAAGGAGGATGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARACCSFK*KEDVAG
Trigger: ACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGGATTCACAAAGGGCTaGCCTGTGTGTGGATTAAGA +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARGFTKG*PVCGLR
Trigger: TCTTAATCCACACACAGGCCAGCCCTTTGTGAATCC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTGGATTCACAAAGGGCTaGCCTGTGTGTGGATTAAGA +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAGFTKG*PVCGLR
Trigger: TCTTAATCCACACACAGGCCAGCCCTTTGTGAATCC...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAGGGGCTGCTGACTGGTaGGTGGGTTGTATATTGCAG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLGAADW*VGCILQ
Trigger: CTGCAATATACAACCCACCCACCAGTCAGCAGCCCC...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCAGGGGCTGCTGACTaGTGGGTGGGTTGTATATTG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLAGAAD*WVGCIL
Trigger: CAATATACAACCCACCCACCAGTCAGCAGCCCCTGC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACGGCTCAGGGTCATCTaGCCAAACTGTGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLRLRVI*PNCVAT
Trigger: TGTGGCAACACAGTTTGGCCAGATGACCCTGAGCCG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATATTGACCAGACAAGACTaGCTGGTAACCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCILTRQD*LVTCLL
Trigger: CAGCAAGCAGGTTACCAGCCAGTCTTGTCTGGTCAA...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGCTGGAGGGGCAGTGTaGGCCAATCAGCCTAAGGTT +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVAGGAV*ANQPKV
Trigger: AACCTTAGGCTGATTGGCCCACACTGCCCCTCCAGC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTGCGACAAGATCCTGTaGAAGGAAGTCTTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFCDKIL*KEVFGR
Trigger: CCTGCCAAAGACTTCCTTCCACAGGATCTTGTCGCA...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396481.6
ENST00000441454.5
CDS-3UTR CCA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGAGGAGAGAGGATACTTaGGATTATATTTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: FGELRGKTSPTRKERGYLRREDT*DYIWFS
Trigger: GCTGAACCAAATATAATCCCAAGTATCCTCTCTCCT...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATCAATTTTCCCTCCCCTaGGCTCAGGTAAACCATTTT +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYQFSLP*AQVNHF
Trigger: AAAATGGTTTACCTGAGCCCAGGGGAGGGAAAATTG...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTGGAGTGGGGGACAACTaGGGCATTACTTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPGVGDN*GITSPR
Trigger: CCTGGGAGAAGTAATGCCCCAGTTGTCCCCCACTCC...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACCACATCATCTCTCATaGGAAAGTGCTGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIPHHLS*ESAALE
Trigger: CTCCAACGCAGCACTTTCCCATGAGAGATGATGTGG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACGAAAATCCACACAAGTaGTCAGAGACAACTGGAGTC +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYENPHK*SETTGV
Trigger: GACTCCAGTTGTCTCTGATCACTTGTGTGGATTTTC...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
CDS-3UTR TCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTCCTCTGCTATTGCCTaGTTCAGGTCTCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLASSAIA*FRSPCS
Trigger: TGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTCCTCTGCTATTGCCTaGTTCAGGTCTCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFSSAIA*FRSPCS
Trigger: TGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGA...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGGTGGTCAGACCACTTaGGTTCATTTTCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAGGQTT*VHFLSC
Trigger: GCAGCTCAGAAAATGAACTCAAGTGGTCTGACCACC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGTACTGTTGCGTGGTTaGGGTAGGGTACTGACCAGA +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLVLLRG*GRVLTR
Trigger: TCTGGTCAGTACCCTACCTCAACCACGCAACAGTAC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGAGGGGTGGGCGGTGTaGCATTACAGTAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVEGWAV*HYSKQA
Trigger: TGCCTGTTTACTGTAATGTCACACCGCCCACCCCTC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTTGGTTATTTATCACGTCCAGCAGCAATCATTTaGGTGTTGAGTGAATACTTA +
Preference number: 4 (lower is better)
Translates to: GRKPSRFAPEFLVGYLSRPAAII*VLSEYL
Trigger: TAAGTATTCACTCAACACTCAAATGATTGCTGCTGG...ACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCAGATTTTATGCCCTTTaGGGGTCAACATTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCRFYAL*GSTFPG
Trigger: GCCTGGAAATGTTGACCCTCAAAGGGCATAAAATCT...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396481.6
CDS-3UTR TCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCTGCATTTTGGGGAGCTaGGAGGTAAGACATCTCCAA +
Preference number: 4 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCCILGS*EVRHLQ
Trigger: TTGGAGATGTCTTACCTCTCAGCTCCCCAAAATGCA...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATCAACTTTTGCAGTATTaGGAAATCTCCACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYQLLQY*EISTKA
Trigger: GGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTG...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCCAACTTTTGCAGTATTaGGAAATCTCCACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAQLLQY*EISTKA
Trigger: GGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTG...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTGCTCTCTGTTTCCATaGGGGGAATTCAGAGTATTT +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCACSLFP*GEFRVF
Trigger: AAATACTCTGAATTCCCCTCATGGAAACAGAGAGCA...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAATCACGTTCACAGCTTaGTCCAGCTCCACCTGTCTC +
Preference number: 4 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPITFTA*SSSTCL
Trigger: GAGACAGGTGGAGCTGGATCAAGCTGTGAACGTGAT...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396482.6
ENST00000412048.5
CDS-3UTR TCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATTTCCCTTACACAGTGTaGCACATCGTCAACACTAAT +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYFPYTV*HIVNTN
Trigger: ATTAGTGTTGACGATGTGTCACACTGTGTAAGGGAA...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396482.6
CDS-3UTR TCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCATAGTAATGGCCACTaGAAGATAGCCTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVHSNGH*KIACPC
Trigger: GCATGGACAGGCTATCTTTCAGTGGCCATTACTATG...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCATAGTAATGGCCACTaGAAGATAGCCTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIHSNGH*KIACPC
Trigger: GCATGGACAGGCTATCTTTCAGTGGCCATTACTATG...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCCATCAGGTATGGGTCTaGGATCAAGTAATACAGGTA +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAHQVWV*DQVIQV
Trigger: TACCTGTATTACTTGATCTCAGACCCATACCTGATG...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTCCCTTACACAGTGTaGCACATCGTCAACCTGAAA +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYFPYTV*HIVNLK
Trigger: TTTCAGGTTGACGATGTGTCACACTGTGTAAGGGAA...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412048.5
CDS-3UTR TCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATATTCCCTTACACAGTGTaGCACATCGTCAACCCTACA +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIFPYTV*HIVNPT
Trigger: TGTAGGGTTGACGATGTGTCACACTGTGTAAGGGAA...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444190.5
CDS-3UTR GCA 90 bp GCAGGAACAAAGCACCATTTACACCTTATTTCTCTGCACCAATTGTATGGATACGAATGCCCATCTCCATaGGATTCCCTTACACAGTGT +
Preference number: 4 (lower is better)
Translates to: AGTKHHLHLISLHQLYGYECPSP*DSLTQC
Trigger: ACACTGTGTAAGGGAATCGCATGGAGATGGGCATTC...GTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR GCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACATTAACAGTTCGGAATaGCCATCTCCATGCGATTCC +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYINSSE*PSPCDS
Trigger: GGAATCGCATGGAGATGGGCATTCCGAACTGTTAAT...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
CDS-3UTR GCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTTTGGTGCAGAATTCCTaGTGTAGGTCTTGGCGACTT +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGILVQNS*CRSWRL
Trigger: AAGTCGCCAAGACCTACAGCAGGAATTCTGCACCAA...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR GCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTGGTGCAGAATTCCTaGTGTAGGTCTTGGCGACTT +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFLVQNS*CRSWRL
Trigger: AAGTCGCCAAGACCTACAGCAGGAATTCTGCACCAA...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
CDS-3UTR GCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTTCCTTCCTCTGCTATTaGCTGATTCAGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGISFLCY*LIQVSL
Trigger: CAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGA...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCTCCTTCCTCTGCTATTaGCTGATTCAGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVSFLCY*LIQVSL
Trigger: CAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGA...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCCACAGACAGCAAGGCTaGGAGTCAGTTTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCHRQQG*ESVYLF
Trigger: GAAAAGGTAAACTGACTCGCAGCCTTGCTGTCTGTG...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCACAGACAGCAAGGCTaGGAGTCAGTTTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVHRQQG*ESVYLF
Trigger: GAAAAGGTAAACTGACTCGCAGCCTTGCTGTCTGTG...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTCACAGACAGCAAGGCTaGGAGTCAGTTTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFHRQQG*ESVYLF
Trigger: GAAAAGGTAAACTGACTCGCAGCCTTGCTGTCTGTG...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGTTCATTTTCTGAGCTaGTCTGTCGACTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIVHFLS*SVDSQM
Trigger: CATCTGGGAGTCGACAGAGCAGCTCAGAAAATGAAC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGAACTGTCGGAGTCTGTaGTGCTCCAGGCCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVNCRSL*CSRPFG
Trigger: ACCAAAGGGCCTGGAGCAGCACAGACTCCGACAGTT...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGTGCTTCCAGGCGGGATaGCTGTTGCAGCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVCFQAG*LLQLQV
Trigger: CACTTGAAGCTGCAACAGGCATCCCGCCTGGAAGCA...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAATATACAGGCATCTGTaGAGGCGGAGGCTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLIYRHL*RRRLLH
Trigger: GTGCAACAGCCTCCGCCTGCACAGATGCCTGTATAT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGTAACCTGCTTGCTGTaGTGCCTGTGGCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLVTCLL*CLWHLL
Trigger: CAACAGATGCCACAGGCAGCACAGCAAGCAGGTTAC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTGCTATCCCAACTAAATaGTACTTCTCCAGGCTCACA +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLAIPTK*YFSRLT
Trigger: TGTGAGCCTGGAGAAGTAGCATTTAGTTGGGATAGC...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396481.6
CDS-3UTR GCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGCAGGGTCTGTCATTCTaGAGAGTTAACATATATTGT +
Preference number: 4 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKQGLSF*RVNIYC
Trigger: ACAATATATGTTAACTCTGCAGAATGACAGACCCTG...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGAGACTGCTGGATATTaGACTGACTGGGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLETAGY*TDWEEA
Trigger: GGCTTCCTCCCAGTCAGTGCAATATCCAGCAGTCTC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCCCCCTGCGTCTTGGTaGCTTGATTGGTTTGATTTA +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIPPASW*LDWFDL
Trigger: TAAATCAAACCAATCAAGGCACCAAGACGCAGGGGG...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCCTTGTGAATACACCTTaGCATCAAAATGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCALVNTP*HQNGST
Trigger: TGTCGACCCATTTTGATGGCAAGGTGTATTCACAAG...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGTGATCAGAGACAACTaGAGTCCCATGTCCCCATTA +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIVIRDN*SPMSPL
Trigger: TAATGGGGACATGGGACTCCAGTTGTCTCTGATCAC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATCCTGCTGTAGGTCTTaGCGACTTACTAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLSCCRS*RLTSGF
Trigger: GAAGCCGCTAGTAAGTCGCCAAGACCTACAGCAGGA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATATTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIFHLLV*QKIPHR
Trigger: TCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAA...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFFHLLV*QKIPHR
Trigger: TCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAA...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIFHLLV*QKIPHR
Trigger: TCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAA...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVFHLLV*QKIPHR
Trigger: TCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAA...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCGCAGGCTGGAAAAACTaGAAAGCTGTAAATGAATTG +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSAGWKN*KAVNEL
Trigger: CAATTCATTTACAGCTTTCCAGTTTTTCCAGCCTGC...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACTCCAGGCCCTTTGGTaGTCAGACCACTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLLQALW*SDHLSS
Trigger: TGAACTCAAGTGGTCTGACCACCAAAGGGCCTGGAG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGTCGCCGTCTTGGTCATaGCGGGCTTTAGATTGCGGT +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVSPSWS*RALDCG
Trigger: ACCGCAATCTAAAGCCCGCCATGACCAAGACGGCGA...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTCCCTATTCCATTCTCTaGATAAGGCACACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAPYSIL*IRHTAW
Trigger: CCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGG...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGCTGCTGGGAGCAACCTaGCCCCCTATTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVLLGAT*PPIPFS
Trigger: AGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCAG...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGAAGGAGGATGTAGCTaGTGCTGCTGGGAGCAACCT +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVEGGCS*CCWEQP
Trigger: AGGTTGCTCCCAGCAGCACCAGCTACATCCTCCTTC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGGGCTGGCCTGTGTGTaGATTAAGAAGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLGLACV*IKKDAS
Trigger: GGAAGCATCCTTCTTAATCCACACACAGGCCAGCCC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACCTGTAGGAAGCTGCTaGCCTGTAGAGGCGATTACA +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLPVGSC*PVEAIT
Trigger: TGTAATCGCCTCTACAGGCCAGCAGCTTCCTACAGG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCAGGGTACTGACCAGATaGGTAATAATATACAGGCAT +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSRVLTR*VIIYRH
Trigger: ATGCCTGTATATTATTACCCATCTGGTCAGTACCCT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTATTGCTGTGCTGCCTGTaGCATCTGTTGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLLLCCL*HLLTPL
Trigger: CAGAGGAGTCAACAGATGCCACAGGCAGCACAGCAA...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATAAGAAGACATTGTTaGGTAGGAAACCATCACGCT +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSIRRHC*VGNHHA
Trigger: AGCGTGATGGTTTCCTACCCAACAATGTCTTCTTAT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTTGGTTATTTATCACGTATAAGAAGACATTGTTaGGTAGGAAACCATCACGCT +
Preference number: 4 (lower is better)
Translates to: GRKPSRFAPEFLVGYLSRIRRHC*VGNHHA
Trigger: AGCGTGATGGTTTCCTACCCAACAATGTCTTCTTAT...ACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAAAACAGGCATTCCAGTaGCTGGGAGTGACCCTTGAC +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLKQAFQ*LGVTLD
Trigger: GTCAAGGGTCACTCCCAGCCACTGGAATGCCTGTTT...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTGCGACAAGATCCTGTaGAAGGAAGTCTTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFCDKIL*KEVFGR
Trigger: CCTGCCAAAGACTTCCTTCCACAGGATCTTGTCGCA...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396481.6
ENST00000441454.5
CDS-3UTR CCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCAATTTTCCCTCCCCTaGGCTCAGGTAAACCATTTT +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCQFSLP*AQVNHF
Trigger: AAAATGGTTTACCTGAGCCCAGGGGAGGGAAAATTG...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTCAATTTTCCCTCCCCTaGGCTCAGGTAAACCATTTT +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLQFSLP*AQVNHF
Trigger: AAAATGGTTTACCTGAGCCCAGGGGAGGGAAAATTG...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGTGGTACCTTGTCAAATaGGACAAAAAGCAGATTAAG +
Preference number: 4 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKWYLVK*DKKQIK
Trigger: CTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCA...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp GCAGGAACAAAGCACCATTTACACCTTATTTCTCTGCACCAATTGTATGGATACTCTGCCAGTGTTCTCTaGGATTCAGTCCGCACATTT +
Preference number: 4 (lower is better)
Translates to: AGTKHHLHLISLHQLYGYSASVL*DSVRTF
Trigger: AAATGTGCGGACTGAATCCCAGAGAACACTGGCAGA...GTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTCTGCCAGTGTTCTCTaGGATTCAGTCCGCACATTT +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFSASVL*DSVRTF
Trigger: AAATGTGCGGACTGAATCCCAGAGAACACTGGCAGA...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCTCTGCCAGTGTTCTCTaGGATTCAGTCCGCACATTT +
Preference number: 4 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCSASVL*DSVRTF
Trigger: AAATGTGCGGACTGAATCCCAGAGAACACTGGCAGA...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAACAGGTAGGAGGTGCTaGGGAGGAAAAGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLTGRRC*GGKETA
Trigger: AGCAGTCTCTTTTCCTCCCCAGCACCTCCTACCTGT...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAACAGGTAGGAGGTGCTaGGGAGGAAAAGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLTGRRC*GGKETA
Trigger: AGCAGTCTCTTTTCCTCCCCAGCACCTCCTACCTGT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
3UTR CAA 72 bp ACAAAGCACCATTTACACCTTATTTCTCTGCACCAATaGTATGGATACACTAGACTTAGGTCCAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: TKHHLHLISLHQ*YGYTRLRSRVG
Trigger: GCCCACTCTGGACCTAAGTCTAGTGTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGAAAATCCACACAAGTaGTCAGAGACAACTGGAGTC +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIENPHK*SETTGV
Trigger: GACTCCAGTTGTCTCTGATCACTTGTGTGGATTTTC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATTTCATCCAGACTTTCTaGTTTAACAATGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYFIQTF*FNNAVL
Trigger: GAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAA...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCACCTTTTCCTGCTCCTaGCTTGGATTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCTFSCS*LGFSSF
Trigger: GAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGT...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACATCCTCTGATACGATaGCATCTGAGGGAACTTTTT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKHPLIR*HLRELF
Trigger: AAAAAGTTCCCTCAGATGTCATCGTATCAGAGGATG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACTTGAGTTCATTTTCTaGGCTGCTCTGTCGACTCCC +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLLEFIF*AALSTP
Trigger: GGGAGTCGACAGAGCAGCTCAGAAAATGAACTCAAG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACATTTGAGTGTTGAGTaGATACTTAAGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKHLSVE*ILKSSA
Trigger: GGCTGAGGACTTAAGTATTCACTCAACACTCAAATG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACTGGTGGTAAAAACATaGCCTTCCTCCATAAGGTCA +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCILVVKT*PSSIRS
Trigger: TGACCTTATGGAGGAAGGTCATGTTTTTACCACCAG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR TCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCAACTTTTGCAGTATTaGGAAATCTCCACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCQLLQY*EISTKA
Trigger: GGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTG...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCATTTTACTTTTGTCTTaGCTGCACCCAGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCILLLS*LHPASD
Trigger: ATCAGAGGCTGGGTGCAGTCAAGACAAAAGTAAAAT...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTGCTCTCTGTTTCCATaGGGGGAATTCAGAGTATTT +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLCSLFP*GEFRVF
Trigger: AAATACTCTGAATTCCCCTCATGGAAACAGAGAGCA...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTCCCTTACACAGTGTaGCACATCGTCAACACTAAT +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLFPYTV*HIVNTN
Trigger: ATTAGTGTTGACGATGTGTCACACTGTGTAAGGGAA...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396482.6
ENST00000432682.5
CDS-3UTR TCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTCATCAGGTATGGGTCTaGGATCAAGTAATACAGGTA +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLHQVWV*DQVIQV
Trigger: TACCTGTATTACTTGATCTCAGACCCATACCTGATG...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACCATCAGGTATGGGTCTaGGATCAAGTAATACAGGTA +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYHQVWV*DQVIQV
Trigger: TACCTGTATTACTTGATCTCAGACCCATACCTGATG...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTAACTTAAGGACAGACTaGACCATCAGGTATGGGTCT +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGINLRTD*TIRYGS
Trigger: AGACCCATACCTGATGGTTCAGTCTGTCCTTAAGTT...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCCTCAAGATGTGGCATTaGTGTTCTGCAGCATCTCTA +
Preference number: 4 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCLKMWH*CSAASL
Trigger: TAGAGATGCTGCAGAACATCAATGCCACATCTTGAG...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTCCATAACCATGCACTaGTCTGTCTTCCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLASITMH*SVFPHA
Trigger: AGCATGAGGGAAGACAGAGCAGTGCATGGTTATGGA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR GCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAATTAACAGTTCGGAATaGCCATCTCCATGCGATTCC +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIINSSE*PSPCDS
Trigger: GGAATCGCATGGAGATGGGCATTCCGAACTGTTAAT...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCATTAACAGTTCGGAATaGCCATCTCCATGCGATTCC +
Preference number: 4 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCINSSE*PSPCDS
Trigger: GGAATCGCATGGAGATGGGCATTCCGAACTGTTAAT...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR GCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTATGCCCTTTGGTaGAGAATTCCTGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYFYALW*RIPAVG
Trigger: ACCTACAGCAGGAATTCTGCACCAAAGGGCATAAAA...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTTTTATGCCCTTTGGTaGAGAATTCCTGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAFYALW*RIPAVG
Trigger: ACCTACAGCAGGAATTCTGCACCAAAGGGCATAAAA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAAGTCCCTCCTTCCTCTaGTATTGCCTGATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLSPSFL*YCLIQV
Trigger: GACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAAGTCCCTCCTTCCTCTaGTATTGCCTGATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLSPSFL*YCLIQV
Trigger: GACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACT...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTCACAGACAGCAAGGCTaGGAGTCAGTTTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAHRQQG*ESVYLF
Trigger: GAAAAGGTAAACTGACTCGCAGCCTTGCTGTCTGTG...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGACAATCCAAAATAAGCTaGCACTCGATGGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARQSKIS*HSMDKH
Trigger: ATGCTTGTCCATCGAGTGGCAGCTTATTTTGGATTG...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGTGGCGGGCTTTAGATTaGGGTTGGAACTGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVWRALD*GWNCRS
Trigger: ACTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCA...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGATATACAGGCATCTGTaGAGGCGGAGGCTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVIYRHL*RRRLLH
Trigger: GTGCAACAGCCTCCGCCTGCACAGATGCCTGTATAT...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGAAACCATCACGCTTTaGACCGGAGTTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLETITL*TGVPCW
Trigger: CCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTAGCATTGCTCATACTTaGACAGTTTGTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARASIAHT*TVCSAA
Trigger: AGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCT...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAAGCATTGCTCATACTTaGACAGTTTGTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKSIAHT*TVCSAA
Trigger: AGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCT...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCACCTGTCAGTTGCTGGTaGGACAAGATCCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPPVSCW*DKILWK
Trigger: CTTCCACAGGATCTTGTCGCACCAGCAACTGACAGG...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396481.6
ENST00000441454.5
CDS-3UTR GCA 90 bp GTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAGAGTATTTCAATTAAAGGTAGCACGGCCACTTaGTTATATGTGTGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: VLSMLSVSMRGIQSISIKGSTAT*LYVCLD
Trigger: ATCCAGACACACATATAAGCAAGTGGCCGTGCTACC...TTTAATTGAAATACTCTGAATTCCCCTCATGGAAACAGAGAGCATTGAGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTCGCACATTTTGTAAGTaGCGGTGGTACCTAATGAAG +
Preference number: 4 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSRTFCK*RWYLMK
Trigger: CTTCATTAGGTACCACCGGCACTTACAAAATGTGCG...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCGCACATTTTGTAAGTaGCGGTGGTACCTAATGAAG +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIRTFCK*RWYLMK
Trigger: CTTCATTAGGTACCACCGGCACTTACAAAATGTGCG...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGAGACTGCTGGATATTaGACTGACTGGGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVETAGY*TDWEEA
Trigger: GGCTTCCTCCCAGTCAGTGCAATATCCAGCAGTCTC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGCTCATGGGAAAGTGCTaGGTTGGAGACACAGGTAGG +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVLMGKC*VGDTGR
Trigger: CCTACCTGTGTCTCCAACGCAGCACTTTCCCATGAG...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATCTCTCATGGGAAAGTaGTGCGTTGGAGACACAGGT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLSLMGK*CVGDTG
Trigger: ACCTGTGTCTCCAACGCAGCACTTTCCCATGAGAGA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACTGGCCAAACTGTGTTaGCACATCATCTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLLAKLC*HIISHG
Trigger: CCCATGAGAGATGATGTGGCAACACAGTTTGGCCAG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTTGCTCTCGCTCTCTTTaGGTTCTGGTCTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPCSRSL*VLVSLS
Trigger: AGAGAGGGAGACCAGAACGCAAAGAGAGCGAGAGCA...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR GCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACGTGGCATTGATGTTCTaGAGCATCTCTAAGATGACT +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYVALMF*SISKMT
Trigger: AGTCATCTTAGAGATGCTGCAGAACATCAATGCCAC...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCAAGATTTTATGCCCTTaGCATCAAAATGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAKILCP*HQNGST
Trigger: TGTCGACCCATTTTGATGGCAAGGGCATAAAATCTT...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000436702.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAGAGCATGCTCTAACATaGCTAATACCACAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKEHALT*LIPQFS
Trigger: TGAGAACTGTGGTATTAGCCATGTTAGAGCATGCTC...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR CCA 90 bp GTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAGAGTATTTCAATTAAAGTGATCAGAGACAACTaGAGTCCCATGTCCCCATTA +
Preference number: 4 (lower is better)
Translates to: VLSMLSVSMRGIQSISIKVIRDN*SPMSPL
Trigger: TAATGGGGACATGGGACTCCAGTTGTCTCTGATCAC...TTTAATTGAAATACTCTGAATTCCCCTCATGGAAACAGAGAGCATTGAGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCGAATCCGTGTATTCTTaGCTGCAATCTTTTGATAAC +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSESVYS*LQSFDN
Trigger: GTTATCAAAAGATTGCAGCCAAGAATACACGGATTC...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCAAGATAAACCGCTTCTaGGATTCTTCACCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSKINRF*DSSPFS
Trigger: TGAAAAAGGTGAAGAATCCCAGAAGCGGTTTATCTT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACAAAACTCGCCGTCTTaGTCATGGCGGGCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLQNSPS*SWRALD
Trigger: ATCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACAAAACTCGCCGTCTTaGTCATGGCGGGCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLQNSPS*SWRALD
Trigger: ATCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGGATTCACAAAGGGCTaGCCTGTGTGTGGATTAAGA +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAGFTKG*PVCGLR
Trigger: TCTTAATCCACACACAGGCCAGCCCTTTGTGAATCC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATTGACCAGACAAGACTaGCTGGTAACCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLLTRQD*LVTCLL
Trigger: CAGCAAGCAGGTTACCAGCCAGTCTTGTCTGGTCAA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAAGAACCCTGGGTCATTaGCACCTGATAAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIRTLGH*HLIRRH
Trigger: ATGTCTTCTTATCAGGTGCCAATGACCCAGGGTTCT...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GCAGGAACAAAGCACCATTTACACCTTATTTCTCTGCACCAATTGTATGGATACCAATTTTCCCTCCCCTaGGCTCAGGTAAACCATTTT +
Preference number: 4 (lower is better)
Translates to: AGTKHHLHLISLHQLYGYQFSLP*AQVNHF
Trigger: AAAATGGTTTACCTGAGCCCAGGGGAGGGAAAATTG...GTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTCTGCCAGTGTTCTCTaGGATTCAGTCCGCACATTT +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFSASVL*DSVRTF
Trigger: AAATGTGCGGACTGAATCCCAGAGAACACTGGCAGA...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR CAA 72 bp ATAAGAAGACATTGTTGGGTAGGAAACCATCACGCTTaGCACCGGAGTTCCTTGTTGGTTATTTATCACGTT +
Preference number: 4 (lower is better)
Translates to: IRRHCWVGNHHA*HRSSLLVIYHV
Trigger: AACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACCCAACAATGTCTTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR TCA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCATCCTCTGCTATTGCCTaGTTCAGGTCTCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPSSAIA*FRSPCS
Trigger: TGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGA...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATTCATCCAGACTTTCTaGTTTAACAATGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKFIQTF*FNNAVL
Trigger: GAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTCATCCAGACTTTCTaGTTTAACAATGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYFIQTF*FNNAVL
Trigger: GAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAA...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCTTCATCCAGACTTTCTaGTTTAACAATGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCFIQTF*FNNAVL
Trigger: GAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAA...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTTCATCCAGACTTTCTaGTTTAACAATGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAFIQTF*FNNAVL
Trigger: GAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCACCTTTTCCTGCTCCTaGCTTGGATTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCTFSCS*LGFSSF
Trigger: GAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGT...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTACCTTTTCCTGCTCCTaGCTTGGATTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGITFSCS*LGFSSF
Trigger: GAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGT...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTACCTTTTCCTGCTCCTaGCTTGGATTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFTFSCS*LGFSSF
Trigger: GAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGT...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACATTTGAGTGTTGAGTaGATACTTAAGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIHLSVE*ILKSSA
Trigger: GGCTGAGGACTTAAGTATTCACTCAACACTCAAATG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACCAGCAGCAATCATTTaGGTGTTGAGTGAATACTTA +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKPAAII*VLSEYL
Trigger: TAAGTATTCACTCAACACTCAAATGATTGCTGCTGG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTCCAGCAGCAATCATTTaGGTGTTGAGTGAATACTTA +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAPAAII*VLSEYL
Trigger: TAAGTATTCACTCAACACTCAAATGATTGCTGCTGG...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTCAAAAGAGAGCCTTTaGGGAAAATTCAGCACTACT +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYSKESL*GKFSTT
Trigger: AGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGA...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTCAAAAGAGAGCCTTTaGGGAAAATTCAGCACTACT +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLSKESL*GKFSTT
Trigger: AGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGA...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp GCAGGAACAAAGCACCATTTACACCTTATTTCTCTGCACCAATTGTATGGATACATTTTACTTTTGTCTTaGCTGCACCCAGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: AGTKHHLHLISLHQLYGYILLLS*LHPASD
Trigger: ATCAGAGGCTGGGTGCAGTCAAGACAAAAGTAAAAT...GTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp GCAGGAACAAAGCACCATTTACACCTTATTTCTCTGCACCAATTGTATGGATACTGCTCTCTGTTTCCATaGGGGGAATTCAGAGTATTT +
Preference number: 4 (lower is better)
Translates to: AGTKHHLHLISLHQLYGYCSLFP*GEFRVF
Trigger: AAATACTCTGAATTCCCCTCATGGAAACAGAGAGCA...GTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTGCTCTCTGTTTCCATaGGGGGAATTCAGAGTATTT +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFCSLFP*GEFRVF
Trigger: AAATACTCTGAATTCCCCTCATGGAAACAGAGAGCA...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTTCCCTTACACAGTGTaGCACATCGTCAACCTTGAT +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFFPYTV*HIVNLD
Trigger: ATCAAGGTTGACGATGTGTCACACTGTGTAAGGGAA...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR GCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGCATTAAAAATAGACTaGACAGAACTCCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIALKID*TELPSG
Trigger: TCCACTGGGGAGTTCTGTGCAGTCTATTTTTAATGC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTATTGGTGCAGAATTCCTaGTGTAGGTCTTGGCGACTT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLLVQNS*CRSWRL
Trigger: AAGTCGCCAAGACCTACAGCAGGAATTCTGCACCAA...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTATCCTTCCTCTGCTATTaGCTGATTCAGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLSFLCY*LIQVSL
Trigger: CAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGA...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTAGTCCCTCCTTCCTCTaGTATTGCCTGATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPSPSFL*YCLIQV
Trigger: GACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACT...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACACAGACAGCAAGGCTaGGAGTCAGTTTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLHRQQG*ESVYLF
Trigger: GAAAAGGTAAACTGACTCGCAGCCTTGCTGTCTGTG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGTTCATTTTCTGAGCTaGTCTGTCGACTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLVHFLS*SVDSQM
Trigger: CATCTGGGAGTCGACAGAGCAGCTCAGAAAATGAAC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACTGGCCAAACTGTGTTaGCACATCATCTCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLLAKLC*HIISLS
Trigger: ACTCAGAGAGATGATGTGGCAACACAGTTTGGCCAG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACCTGCCAACCAGCATTaGTCATACTTGCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLPANQH*SYLHSL
Trigger: CAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAGACATGACAGAAATATaGACCATTAACCAGCTAACG +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKDMTEI*TINQLT
Trigger: CGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTC...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCTACTTTTGTCTTGACTaGACCCAGCCTCTGATAAAA +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCYFCLD*TQPLIK
Trigger: TTTTATCAGAGGCTGGGTGCAGTCAAGACAAAAGTA...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATCAGGGTCTGTCATTCTaGAGAGTTAACATATATTGT +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYQGLSF*RVNIYC
Trigger: ACAATATATGTTAACTCTGCAGAATGACAGACCCTG...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTCGCACATTTTGTAAGTaGCGGTGGTACCTAATGAAG +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFRTFCK*RWYLMK
Trigger: CTTCATTAGGTACCACCGGCACTTACAAAATGTGCG...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGTCTCTCATGGGAAAGTaGTGCGTTGGAGACACAGGT +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVSLMGK*CVGDTG
Trigger: ACCTGTGTCTCCAACGCAGCACTTTCCCATGAGAGA...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCAGATTTTATGCCCTTTaGTGCAGAATTCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCRFYAL*CRIPAV
Trigger: TACAGCAGGAATTCTGCACCAAAGGGCATAAAATCT...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR CCA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCGTATCATCCTGTCCCTaGAATTATTCTTTAATGTGT +
Preference number: 4 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSVSSCP*NYSLMC
Trigger: ACACATTAAAGAATAATTCCAGGGACAGGATGATAC...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAACAAAAAGGCTTTCCTaGGAGCAAACTGAATCGTGT +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCITKRLS*EQTESC
Trigger: ACACGATTCAGTTTGCTCCCAGGAAAGCCTTTTTGT...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGCTTTAGATTGCGGTTaGAACTGTCGGAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVALDCG*NCRSLC
Trigger: GCACAGACTCCGACAGTTCCAACCGCAATCTAAAGC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATGTTGCAGCTTCAAGTaGAAGGAGGATGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLCCSFK*KEDVAG
Trigger: ACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTATGTTGCAGCTTCAAGTaGAAGGAGGATGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLCCSFK*KEDVAG
Trigger: ACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACA...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTAGGGTACTGACCAGATaGGTAATAATATACAGGCAT +
Preference number: 4 (lower is better)
Translates to: SSIKGHEKYLKKCTTARARVLTR*VIIYRH
Trigger: ATGCCTGTATATTATTACCCATCTGGTCAGTACCCT...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAAGGGTACTGACCAGATaGGTAATAATATACAGGCAT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKRVLTR*VIIYRH
Trigger: ATGCCTGTATATTATTACCCATCTGGTCAGTACCCT...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAATAAGAAGACATTGTTaGGTAGGAAACCATCACGCT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKIRRHC*VGNHHA
Trigger: AGCGTGATGGTTTCCTACCCAACAATGTCTTCTTAT...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAGAACCCTGGGTCATTaGCACCTGATAAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLARTLGH*HLIRRH
Trigger: ATGTCTTCTTATCAGGTGCCAATGACCCAGGGTTCT...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCAGGAGAGAGGATACTTaGGATTATATTTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCRREDT*DYIWFS
Trigger: GCTGAACCAAATATAATCCCAAGTATCCTCTCTCCT...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTAGGAGAGAGGATACTTaGGATTATATTTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLRREDT*DYIWFS
Trigger: GCTGAACCAAATATAATCCCAAGTATCCTCTCTCCT...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp GTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAGAGTATTTCAATTAAACAATTTTCCCTCCCCTaGGCTCAGGTAAACCATTTT +
Preference number: 4 (lower is better)
Translates to: VLSMLSVSMRGIQSISIKQFSLP*AQVNHF
Trigger: AAAATGGTTTACCTGAGCCCAGGGGAGGGAAAATTG...TTTAATTGAAATACTCTGAATTCCCCTCATGGAAACAGAGAGCATTGAGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTTTTTGTAAGTGCCGGTaGTACCTAATGAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIFCKCR*YLMKAL
Trigger: CAATGCCTTCATTAGGTACCACCGGCACTTACAAAA...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCTTTTGTAAGTGCCGGTaGTACCTAATGAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVFCKCR*YLMKAL
Trigger: CAATGCCTTCATTAGGTACCACCGGCACTTACAAAA...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGCCACATCATCTCTCATaGGAAAGTGCTGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVPHHLS*ESAALE
Trigger: CTCCAACGCAGCACTTTCCCATGAGAGATGATGTGG...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCTTCATCCAGACTTTCTaGTTTAACAATGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVFIQTF*FNNAVL
Trigger: GAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAA...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTTTCATCCAGACTTTCTaGTTTAACAATGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSFIQTF*FNNAVL
Trigger: GAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAA...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTACCTTTTCCTGCTCCTaGCTTGGATTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFTFSCS*LGFSSF
Trigger: GAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGT...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp AGGTCTCATTGCATATGTTACTGTCTTCCAAGAGCCTACTGTTTTCCACAAAAACATCCTCTGATACGATaGCATCTGAGGGAACTTTTT +
Preference number: 4 (lower is better)
Translates to: RSHCICYCLPRAYCFPQKHPLIR*HLRELF
Trigger: AAAAAGTTCCCTCAGATGTCATCGTATCAGAGGATG...TTTTTGTGGAAAACAGTAGGCTCTTGGAAGACAGTAACATATGCAATGAGACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR TCA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCTCAAAAGAGAGCCTTTaGGGAAAATTCAGCACTACT +
Preference number: 4 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCSKESL*GKFSTT
Trigger: AGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGA...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTTGCATTTTGGGGAGCTaGGAGGTAAGACATCTCCAA +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPCILGS*EVRHLQ
Trigger: TTGGAGATGTCTTACCTCTCAGCTCCCCAAAATGCA...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTATTTTACTTTTGTCTTaGCTGCACCCAGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFILLLS*LHPASD
Trigger: ATCAGAGGCTGGGTGCAGTCAAGACAAAAGTAAAAT...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp GTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAGAGTATTTCAATTAAACATCAGGTATGGGTCTaGGATCAAGTAATACAGGTA +
Preference number: 4 (lower is better)
Translates to: VLSMLSVSMRGIQSISIKHQVWV*DQVIQV
Trigger: TACCTGTATTACTTGATCTCAGACCCATACCTGATG...TTTAATTGAAATACTCTGAATTCCCCTCATGGAAACAGAGAGCATTGAGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCATTGGCAATAAACCTTTaGGGGTCAACATTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPLAINL*GSTFPG
Trigger: GCCTGGAAATGTTGACCCTCAAAGGTTTATTGCCAA...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR TCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTTACACACACTTGTaGATACACCTTGCCATCAAA +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVLYTHL*IHLAIK
Trigger: TTTGATGGCAAGGTGTATTCACAAGTGTGTGTAAAG...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR TCA 90 bp GTCATCTCTAAATGGATGCATTCTGTTTTGCATAACAAGGTTTGTTCTTTACAGTACAGCTACACCGGTTaGTCATCGGTCCGTATTGAT +
Preference number: 4 (lower is better)
Translates to: VISKWMHSVLHNKVCSLQYSYTG*SSVRID
Trigger: ATCAATACGGACCGATGATCAACCGGTGTAGCTGTA...CTGTAAAGAACAAACCTTGTTATGCAAAACAGAATGCATCCATTTAGAGATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAATTAACAGTTCGGAATaGCCATCTCCATGCGATTCC +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLINSSE*PSPCDS
Trigger: GGAATCGCATGGAGATGGGCATTCCGAACTGTTAAT...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCATCCTTCCTCTGCTATTaGCTGATTCAGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPSFLCY*LIQVSL
Trigger: CAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGA...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCACACAGACAGCAAGGCTaGGAGTCAGTTTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPHRQQG*ESVYLF
Trigger: GAAAAGGTAAACTGACTCGCAGCCTTGCTGTCTGTG...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTCACAGACAGCAAGGCTaGGAGTCAGTTTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPHRQQG*ESVYLF
Trigger: GAAAAGGTAAACTGACTCGCAGCCTTGCTGTCTGTG...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGCACAGACAGCAAGGCTaGGAGTCAGTTTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVHRQQG*ESVYLF
Trigger: GAAAAGGTAAACTGACTCGCAGCCTTGCTGTCTGTG...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTGTTCACAAAACCTTTaGTCTGGTATTCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLACSQNL*SGILVL
Trigger: CAGCACCAGAATACCAGAGCAAAGGTTTTGTGAACA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGTTCATTTTCTGAGCTaGTCTGTCGACTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVVHFLS*SVDSQM
Trigger: CATCTGGGAGTCGACAGAGCAGCTCAGAAAATGAAC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGCCTGCCAACCAGCATTaGTCATACTTGCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVPANQH*SYLHSL
Trigger: CAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGG...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGACATGACAGAAATATaGACCATTAACCAGCTAACG +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIDMTEI*TINQLT
Trigger: CGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTACTTTTGTCTTGACTaGACCCAGCCTCTGATAAAA +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFYFCLD*TQPLIK
Trigger: TTTTATCAGAGGCTGGGTGCAGTCAAGACAAAAGTA...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACCAGGGTCTGTCATTCTaGAGAGTTAACATATATTGT +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYQGLSF*RVNIYC
Trigger: ACAATATATGTTAACTCTGCAGAATGACAGACCCTG...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATTACACCTTATTTCTCTaGACCAATTGTATGGATACA +
Preference number: 4 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYYTLFL*TNCMDT
Trigger: TGTATCCATACAATTGGTGCAGAGAAATAAGGTGTA...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACACCTTATTTCTCTaGACCAATTGTATGGATACA +
Preference number: 4 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAYTLFL*TNCMDT
Trigger: TGTATCCATACAATTGGTGCAGAGAAATAAGGTGTA...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTGGTAGCACGGCCACTTaGTTATATGTGTGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPGSTAT*LYVCLD
Trigger: ATCCAGACACACATATAAGCAAGTGGCCGTGCTACC...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTAAGAGTGATTCAAGTTaGAGTAATACACTGACAGGT +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLKSDSS*SNTLTG
Trigger: ACCTGTCAGTGTATTACTGCAACTTGAATCACTCTT...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACAAGAGTGATTCAAGTTaGAGTAATACACTGACAGGT +
Preference number: 4 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYKSDSS*SNTLTG
Trigger: ACCTGTCAGTGTATTACTGCAACTTGAATCACTCTT...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGTAACCATACTCAACTaGGATCTAAGAGGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAVTILN*DLRGKV
Trigger: GACTTTCCCTCTTAGATCCCAGTTGAGTATGGTTAC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR CCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCAGATTTTATGCCCTTTaGTGCAGAATTCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVRFYAL*CRIPAV
Trigger: TACAGCAGGAATTCTGCACCAAAGGGCATAAAATCT...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAAGATTTTATGCCCTTTaGTGCAGAATTCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIRFYAL*CRIPAV
Trigger: TACAGCAGGAATTCTGCACCAAAGGGCATAAAATCT...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTAGATTTTATGCCCTTTaGTGCAGAATTCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSRFYAL*CRIPAV
Trigger: TACAGCAGGAATTCTGCACCAAAGGGCATAAAATCT...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR CCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCTTCCTGCTCCTGACTTaGATTTTCTTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCFLLLT*IFFFLD
Trigger: ATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAA...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTCCTGCTCCTGACTTaGATTTTCTTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLFLLLT*IFFFLD
Trigger: ATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAA...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATTCCTGCTCCTGACTTaGATTTTCTTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKFLLLT*IFFFLD
Trigger: ATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVFHLLV*QKIPHR
Trigger: TCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAA...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPFHLLV*QKIPHR
Trigger: TCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAA...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGAATCCGTGTATTCTTaGCTGCAATCTTTTGATAAC +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARESVYS*LQSFDN
Trigger: GTTATCAAAAGATTGCAGCCAAGAATACACGGATTC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAAAGATAAACCGCTTCTaGGATTCTTCACCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARKINRF*DSSPFS
Trigger: TGAAAAAGGTGAAGAATCCCAGAAGCGGTTTATCTT...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTGGTACCTTGTCAAATaGGACAAAAAGCAGATTAAG +
Preference number: 4 (lower is better)
Translates to: QPYQKRAFEENSALLCLLWYLVK*DKKQIK
Trigger: CTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCA...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
3UTR CAA 72 bp GGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTaGGGATTATATTTGGTTCAGCCTTATCAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GKTSPTRKERGY*GLYLVQPYQKR
Trigger: TCTCTTTTGATAAGGCTGAACCAAATATAATCCCAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAACCTTTTCCTGCTCCTaGCTTGGATTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLTFSCS*LGFSSF
Trigger: GAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACATCCTCTGATACGATaGCATCTGAGGGAACTTTTT +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLHPLIR*HLRELF
Trigger: AAAAAGTTCCCTCAGATGTCATCGTATCAGAGGATG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACATCCTCTGATACGATaGCATCTGAGGGAACTTTTT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLHPLIR*HLRELF
Trigger: AAAAAGTTCCCTCAGATGTCATCGTATCAGAGGATG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACATTTGAGTGTTGAGTaGATACTTAAGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLHLSVE*ILKSSA
Trigger: GGCTGAGGACTTAAGTATTCACTCAACACTCAAATG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR TCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTCAAAAGAGAGCCTTTaGGGAAAATTCAGCACTACT +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFSKESL*GKFSTT
Trigger: AGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGA...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAATTTTACTTTTGTCTTaGCTGCACCCAGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPILLLS*LHPASD
Trigger: ATCAGAGGCTGGGTGCAGTCAAGACAAAAGTAAAAT...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAACTTAAGGACAGACTaGACCATCAGGTATGGGTCT +
Preference number: 4 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPNLRTD*TIRYGS
Trigger: AGACCCATACCTGATGGTTCAGTCTGTCCTTAAGTT...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTGCAGCATCTCTAAGATaGCTGAAAAATTATTTGCAG +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIAASLR*LKNYLQ
Trigger: CTGCAAATAATTTTTCAGTCATCTTAGAGATGCTGC...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR TCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTATTTCTCCAACTTTTaGACAAATGACCCTCGACTT +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFYFSNF*TNDPRL
Trigger: AAGTCGAGGGTCATTTGTTCAAAAGTTGGAGAAATA...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000436702.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCTATTTCTCCAACTTTTaGACAAATGACCCTCGACTT +
Preference number: 4 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVYFSNF*TNDPRL
Trigger: AAGTCGAGGGTCATTTGTTCAAAAGTTGGAGAAATA...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR GCA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAATTAACAGTTCGGAATaGCCATCTCCATGCGATTCC +
Preference number: 4 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPINSSE*PSPCDS
Trigger: GGAATCGCATGGAGATGGGCATTCCGAACTGTTAAT...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATTTTATGCCCTTTGGTaGAGAATTCCTGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLFYALW*RIPAVG
Trigger: ACCTACAGCAGGAATTCTGCACCAAAGGGCATAAAA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATGTTCACAAAACCTTTaGTCTGGTATTCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLCSQNL*SGILVL
Trigger: CAGCACCAGAATACCAGAGCAAAGGTTTTGTGAACA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGACATGACAGAAATATaGACCATTAACCAGCTAACG +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLADMTEI*TINQLT
Trigger: CGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCTTTCTGGACAACTTTTaGAGTATTGAGAAATCTCCA +
Preference number: 4 (lower is better)
Translates to: LVQPYQKRAFEENSALLCFLDNF*SIEKSP
Trigger: TGGAGATTTCTCAATACTGCAAAAGTTGTCCAGAAA...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATATTCCTGCTCCTGACTTaGATTTTCTTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: AYLADMTEICTINQLTCIFLLLT*IFFFLD
Trigger: ATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAA...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTTTCCTGCTCCTGACTTaGATTTTCTTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIFLLLT*IFFFLD
Trigger: ATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAA...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTCCTGCTCCTGACTTaGATTTTCTTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFFLLLT*IFFFLD
Trigger: ATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAA...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGCAGGCTGGAAAAACTaGAAAGCTGTAAATGAATTG +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAAGWKN*KAVNEL
Trigger: CAATTCATTTACAGCTTTCCAGTTTTTCCAGCCTGC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAAGTATCATCCTGTCCCTaGAATTATTCTTTAATGTGT +
Preference number: 4 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKVSSCP*NYSLMC
Trigger: ACACATTAAAGAATAATTCCAGGGACAGGATGATAC...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGTATCATCCTGTCCCTaGAATTATTCTTTAATGTGT +
Preference number: 4 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARVSSCP*NYSLMC
Trigger: ACACATTAAAGAATAATTCCAGGGACAGGATGATAC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTAGGAGAGAGGATACTTaGGATTATATTTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFRREDT*DYIWFS
Trigger: GCTGAACCAAATATAATCCCAAGTATCCTCTCTCCT...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATTCATCCAGACTTTCTaGTTTAACAATGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLFIQTF*FNNAVL
Trigger: GAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCATTCATCCAGACTTTCTaGTTTAACAATGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPFIQTF*FNNAVL
Trigger: GAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAA...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGACCTTTTCCTGCTCCTaGCTTGGATTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVTFSCS*LGFSSF
Trigger: GAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGT...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR TCA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAACCTTTTCCTGCTCCTaGCTTGGATTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPTFSCS*LGFSSF
Trigger: GAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGT...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTCAACTTTTGCAGTATTaGGAAATCTCCACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPQLLQY*EISTKA
Trigger: GGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTG...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTTGCTCTCTGTTTCCATaGGGGGAATTCAGAGTATTT +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPCSLFP*GEFRVF
Trigger: AAATACTCTGAATTCCCCTCATGGAAACAGAGAGCA...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR TCA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCACAACTTTTGAACAAATaGCCCTCGACTTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPQLLNK*PSTSDS
Trigger: TGAGTCAGAAGTCGAGGGTCATTTGTTCAAAAGTTG...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR GCA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCATTTTATGCCCTTTGGTaGAGAATTCCTGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPFYALW*RIPAVG
Trigger: ACCTACAGCAGGAATTCTGCACCAAAGGGCATAAAA...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGCAATCCAAAATAAGCTaGCACTCGATGGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVQSKIS*HSMDKH
Trigger: ATGCTTGTCCATCGAGTGGCAGCTTATTTTGGATTG...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR GCA 90 bp TGGATGCATTCTGTTTTGCATAACAAGGTTTGTTCTTTACAGCTACACCGGTTGTCTTATAGGTCTCATTaGATATGTTACTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: WMHSVLHNKVCSLQLHRLSYRSH*ICYCLP
Trigger: TGGAAGACAGTAACATATGCAATGAGACCTATAAGA...CAACCGGTGTAGCTGTAAAGAACAAACCTTGTTATGCAAAACAGAATGCATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR GCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGAGCATTGCTCATACTTaGACAGTTTGTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVSIAHT*TVCSAA
Trigger: AGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCT...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR GCA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTTTTCTGGACAACTTTTaGAGTATTGAGAAATCTCCA +
Preference number: 4 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIFLDNF*SIEKSP
Trigger: TGGAGATTTCTCAATACTGCAAAAGTTGTCCAGAAA...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTCTGGACAACTTTTaGAGTATTGAGAAATCTCCA +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFFLDNF*SIEKSP
Trigger: TGGAGATTTCTCAATACTGCAAAAGTTGTCCAGAAA...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCATACTTTTGTCTTGACTaGACCCAGCCTCTGATAAAA +
Preference number: 4 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPYFCLD*TQPLIK
Trigger: TTTTATCAGAGGCTGGGTGCAGTCAAGACAAAAGTA...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp GGTCTCATTGCATATGTTACTGTCTTCCAAGAGCCTACTGTTTTCCACAAAAAGGGATGCATTCTGTTTTaGATAACAAGGTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GLIAYVTVFQEPTVFHKKGCILF*ITRFVL
Trigger: AAGAACAAACCTTGTTATGCAAAACAGAATGCATCC...CTTTTTGTGGAAAACAGTAGGCTCTTGGAAGACAGTAACATATGCAATGAGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAAGATTTTATGCCCTTTaGTGCAGAATTCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLRFYAL*CRIPAV
Trigger: TACAGCAGGAATTCTGCACCAAAGGGCATAAAATCT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTTCCTGCTCCTGACTTaGATTTTCTTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAFLLLT*IFFFLD
Trigger: ATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTTCCTGCTCCTGACTTaGATTTTCTTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFFLLLT*IFFFLD
Trigger: ATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAA...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAGCAGGCTGGAAAAACTaGAAAGCTGTAAATGAATTG +
Preference number: 4 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLAGWKN*KAVNEL
Trigger: CAATTCATTTACAGCTTTCCAGTTTTTCCAGCCTGC...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp CTTATAGGTCTCATTGCATATGTTACTGTCTTCCAAGAGCCTACTGTTTTCCACGTATCATCCTGTCCCTaGAATTATTCTTTAATGTGT +
Preference number: 4 (lower is better)
Translates to: LIGLIAYVTVFQEPTVFHVSSCP*NYSLMC
Trigger: ACACATTAAAGAATAATTCCAGGGACAGGATGATAC...GTGGAAAACAGTAGGCTCTTGGAAGACAGTAACATATGCAATGAGACCTATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR CCA 90 bp GTCATCTCTAAATGGATGCATTCTGTTTTGCATAACAAGGTTTGTTCTTTACAGACAAAAAGGCTTTCCTaGGAGCAAACTGAATCGTGT +
Preference number: 4 (lower is better)
Translates to: VISKWMHSVLHNKVCSLQTKRLS*EQTESC
Trigger: ACACGATTCAGTTTGCTCCCAGGAAAGCCTTTTTGT...CTGTAAAGAACAAACCTTGTTATGCAAAACAGAATGCATCCATTTAGAGATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAATAAGAAGACATTGTTaGGTAGGAAACCATCACGCT +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLIRRHC*VGNHHA
Trigger: AGCGTGATGGTTTCCTACCCAACAATGTCTTCTTAT...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CCA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTATAGTCTATAGACACTaGAAATGGCTTTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFIVYRH*KWLFRV
Trigger: AACTCTGAAAAGCCATTTCCAGTGTCTATAGACTAT...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396481.6
CDS-3UTR CCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTTTTTGTAAGTGCCGGTaGTACCTAATGAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPFCKCR*YLMKAL
Trigger: CAATGCCTTCATTAGGTACCACCGGCACTTACAAAA...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR TCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTTTCATCCAGACTTTCTaGTTTAACAATGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPFIQTF*FNNAVL
Trigger: GAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAA...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTCTTATAGGTCTCATTaGATATGTTACTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLASYRSH*ICYCLP
Trigger: TGGAAGACAGTAACATATGCAATGAGACCTATAAGA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187397.8
ENST00000417925.5
CDS-3UTR GCA 90 bp GTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAGAGTATTTCAATTAAATTTCTGGACAACTTTTaGAGTATTGAGAAATCTCCA +
Preference number: 4 (lower is better)
Translates to: VLSMLSVSMRGIQSISIKFLDNF*SIEKSP
Trigger: TGGAGATTTCTCAATACTGCAAAAGTTGTCCAGAAA...TTTAATTGAAATACTCTGAATTCCCCTCATGGAAACAGAGAGCATTGAGAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTTTCTGGACAACTTTTaGAGTATTGAGAAATCTCCA +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFFLDNF*SIEKSP
Trigger: TGGAGATTTCTCAATACTGCAAAAGTTGTCCAGAAA...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
37% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR GCA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTAATAACAAGATTTTATaGCCTTGCCATCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: PYQKRAFEENSALLCLLFNNKIL*PCHQNG
Trigger: CCCATTTTGATGGCAAGGGCATAAAATCTTGTTATT...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000436702.5
CDS-3UTR CCA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGAGATTTTATGCCCTTTaGTGCAGAATTCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVRFYAL*CRIPAV
Trigger: TACAGCAGGAATTCTGCACCAAAGGGCATAAAATCT...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAAAGATAAACCGCTTCTaGGATTCTTCACCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLKINRF*DSSPFS
Trigger: TGAAAAAGGTGAAGAATCCCAGAAGCGGTTTATCTT...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CCA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCATGGTACCTTGTCAAATaGGACAAAAAGCAGATTAAG +
Preference number: 4 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPWYLVK*DKKQIK
Trigger: CTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCA...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATCTTATAGGTCTCATTaGATATGTTACTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLSYRSH*ICYCLP
Trigger: TGGAAGACAGTAACATATGCAATGAGACCTATAAGA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187397.8
ENST00000417925.5
CDS-3UTR GCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTAAGAGTGATTCAAGTTaGAGTAATACACTGACAGGT +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPKSDSS*SNTLTG
Trigger: ACCTGTCAGTGTATTACTGCAACTTGAATCACTCTT...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CCA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTTTCCTGCTCCTGACTTaGATTTTCTTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPFLLLT*IFFFLD
Trigger: ATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAA...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CCA 90 bp GTCATCTCTAAATGGATGCATTCTGTTTTGCATAACAAGGTTTGTTCTTTACAGAAGATAAACCGCTTCTaGGATTCTTCACCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: VISKWMHSVLHNKVCSLQKINRF*DSSPFS
Trigger: TGAAAAAGGTGAAGAATCCCAGAAGCGGTTTATCTT...CTGTAAAGAACAAACCTTGTTATGCAAAACAGAATGCATCCATTTAGAGATGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR CCA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCATGGTACCTTGTCAAATaGGACAAAAAGCAGATTAAG +
Preference number: 4 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPWYLVK*DKKQIK
Trigger: CTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCA...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR GCA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCATTTCTGGACAACTTTTaGAGTATTGAGAAATCTCCA +
Preference number: 4 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPFLDNF*SIEKSP
Trigger: TGGAGATTTCTCAATACTGCAAAAGTTGTCCAGAAA...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS GCA 90 bp CTGCGGCGGCGGCTCGGTCGCGGCTTGTGTCCCCGCTGCCCCTGCTaGTGCTGGTCTCTGCTCCGGACGCGCTCAGAAGGTGCCACCGCC +
Preference number: 5 (lower is better)
Translates to: LRRRLGRGLCPRCPC*CWSLLRTRSEGATA
Trigger: GGCGGTGGCACCTTCTGAGCGCGTCCGGAGCAGAGACCAGCAGCAGCAGGGGCAGCGGGGACACAAGCCGCGACCGAGCCGCCGCCGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS GCA 90 bp GGGCTGCGGCGGCGGCTCGGTCGCGGCTTGTGTCCCCGCTGCCCCTaGTGCTGCTGGTCTCTGCTCCGGACGCGCTCAGAAGGTGCCACC +
Preference number: 5 (lower is better)
Translates to: GLRRRLGRGLCPRCP*CCWSLLRTRSEGAT
Trigger: GGTGGCACCTTCTGAGCGCGTCCGGAGCAGAGACCAGCAGCAGCAGGGGCAGCGGGGACACAAGCCGCGACCGAGCCGCCGCCGCAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS GCA 90 bp CAGCCAGGGCTGCGGCGGCGGCTCGGTCGCGGCTTGTGTCCCCGCTaGCCCTGCTGCTGCTGGTCTCTGCTCCGGACGCGCTCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: QPGLRRRLGRGLCPR*PCCCWSLLRTRSEG
Trigger: ACCTTCTGAGCGCGTCCGGAGCAGAGACCAGCAGCAGCAGGGGCAGCGGGGACACAAGCCGCGACCGAGCCGCCGCCGCAGCCCTGGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CCA 90 bp TCCGGACGCGCTCAGAAGGTGCCACCGCCGCCTTCTCTGGCCGGCTaGCCGCCGGGAGTGAACGCGCCCCCGCCTCCTGTCTGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SGRAQKVPPPPSLAG*PPGVNAPPPPVCSS
Trigger: AGAAGAGCAGACAGGAGGCGGGGGCGCGTTCACTCCCGGCGGCCAGCCGGCCAGAGAAGGCGGCGGTGGCACCTTCTGAGCGCGTCCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS GCA 90 bp GGGCCTGCCATCTGTGGCTGCGGTGGCTGGACCTGCTGTTGGGGCTaGGGGGAGGGCTGCTGCTGTGGTGGCTGCTGTTGGGACTGCCCC +
Preference number: 5 (lower is better)
Translates to: GPAICGCGGWTCCWG*GEGCCCGGCCWDCP
Trigger: GGGGCAGTCCCAACAGCAGCCACCACAGCAGCAGCCCTCCCCGCAGCCCCAACAGCAGGTCCAGCCACCGCAGCCACAGATGGCAGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
ENST00000684406.1
CDS GCA 90 bp CTGGCCGGCTGGCCGCCGGGAGTGAACGCGCCCCCGCCTCCTGTCTaGTCTTCTGTCCGTCTGCACGTCTGTCAGTCCGACCGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: LAGWPPGVNAPPPPV*SSVRLHVCQSDRLW
Trigger: CCACAGACGGTCGGACTGACAGACGTGCAGACGGACAGAAGAGCAGACAGGAGGCGGGGGCGCGTTCACTCCCGGCGGCCAGCCGGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CCA 90 bp ACCAGAGGGCCTGCCATCTGTGGCTGCGGTGGCTGGACCTGCTGTTaGGGCTGCGGGGAGGGCTGCTGCTGTGGTGGCTGCTGTTGGGAC +
Preference number: 5 (lower is better)
Translates to: TRGPAICGCGGWTCC*GCGEGCCCGGCCWD
Trigger: GTCCCAACAGCAGCCACCACAGCAGCAGCCCTCCCCGCAGCCCCAACAGCAGGTCCAGCCACCGCAGCCACAGATGGCAGGCCCTCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
ENST00000684406.1
CDS GCA 90 bp CGTCCCTCTTCCGGTCTTCTGTGCCCACAGTCCTCTCCCACTCTGTaGCCCTGGCCGCTTCGCTCGGTAAGAGGAGGGCGTGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: RPSSGLLCPQSSPTL*PWPLRSVRGGRVEG
Trigger: TCCCTCCACACGCCCTCCTCTTACCGAGCGAAGCGGCCAGGGGCACAGAGTGGGAGAGGACTGTGGGCACAGAAGACCGGAAGAGGGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CCA 90 bp TCTTCCGGTCTTCTGTGCCCACAGTCCTCTCCCACTCTGTGCCCCTaGCCGCTTCGCTCGGTAAGAGGAGGGCGTGTGGAGGGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: SSGLLCPQSSPTLCP*PLRSVRGGRVEGGS
Trigger: GCTCCCTCCCTCCACACGCCCTCCTCTTACCGAGCGAAGCGGCCAGGGGCACAGAGTGGGAGAGGACTGTGGGCACAGAAGACCGGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS GCA 90 bp GCGCTGGTCTGTCCGTCCGTCCGAATCCCTCCGTCCCACCAGCAATaGAGCGTCCCTCTTCCGGTCTTCTGTGCCCACAGTCCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: ALVCPSVRIPPSHQQ*SVPLPVFCAHSPLP
Trigger: TGGGAGAGGACTGTGGGCACAGAAGACCGGAAGAGGGACGCTGCATTGCTGGTGGGACGGAGGGATTCGGACGGACGGACAGACCAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS GCA 90 bp AGCTCGGCGCGGGATTCTCGCTTTGCTGCGCTCTGCTCTCAAAGCTaGCACTCTCGCAGGCTGCCAGTCTGTGCGCTGGTCTGTCCGTCC +
Preference number: 5 (lower is better)
Translates to: SSARDSRFAALCSQS*HSRRLPVCALVCPS
Trigger: GGACGGACAGACCAGCGCACAGACTGGCAGCCTGCGAGAGTGGCAGCTTTGAGAGCAGAGCGCAGCAAAGCGAGAATCCCGCGCCGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS GCA 90 bp CTCGCTTTGCTGCGCTCTGCTCTCAAAGCTGCCACTCTCGCAGGCTaGCAGTCTGTGCGCTGGTCTGTCCGTCCGTCCGAATCCCTCCGT +
Preference number: 5 (lower is better)
Translates to: LALLRSALKAATLAG*QSVRWSVRPSESLR
Trigger: ACGGAGGGATTCGGACGGACGGACAGACCAGCGCACAGACTGGCAGCCTGCGAGAGTGGCAGCTTTGAGAGCAGAGCGCAGCAAAGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CCA 90 bp TCTGCTCTCAAAGCTGCCACTCTCGCAGGCTGCCAGTCTGTGCGCTaGTCTGTCCGTCCGTCCGAATCCCTCCGTCCCACCAGCAATGCA +
Preference number: 5 (lower is better)
Translates to: SALKAATLAGCQSVR*SVRPSESLRPTSNA
Trigger: TGCATTGCTGGTGGGACGGAGGGATTCGGACGGACGGACAGACCAGCGCACAGACTGGCAGCCTGCGAGAGTGGCAGCTTTGAGAGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CCA 90 bp GGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTaGCCAAACTGTGTTGCCACATCATCTCTCATGGGAAAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: GGSGVSPEDCRLRVI*PNCVATSSLMGKCC
Trigger: GCAGCACTTTCCCATGAGAGATGATGTGGCAACACAGTTTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
ENST00000684406.1
CDS-3UTR CAA 90 bp ATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCCAAGGCTTTAGATTGCGGTaGGAACTGTCGGAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: MGVQESPPRTAGSGSSGQGFRLR*ELSESV
Trigger: CACAGACTCCGACAGTTCCAACCGCAATCTAAAGCC...TTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp CAGCCTGGAGAGCCAGCTGCCACACCTGAGACTAGGGGTGTGCTCTGGAGAGGTCCAAAACTCGCCGTCTaGGTCATGGCGGGCTTTAGA +
Preference number: 5 (lower is better)
Translates to: QPGEPAATPETRGVLWRGPKLAV*VMAGFR
Trigger: TCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTGG...ACCTCTCCAGAGCACACCCCTAGTCTCAGGTGTGGCAGCTGGCTCTCCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CAA 90 bp CTGGCCTGTAGAGGCGATTACATAGCTGGGCTGCTGGGCCGGCTGTGGCATAAGGACTCGGAACCTGCTTaGGACAGCTTCCCGGTACTC +
Preference number: 5 (lower is better)
Translates to: LACRGDYIAGLLGRLWHKDSEPA*DSFPVL
Trigger: GAGTACCGGGAAGCTGTCCAAAGCAGGTTCCGAGTC...CTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp TGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCCAAACAGAGCTCTCAGAATTaGACCTGCCAACCAGCATTG +
Preference number: 5 (lower is better)
Translates to: WGFRSLPRGLPAQGHLAKQSSQN*TCQPAL
Trigger: CAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTG...TTTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp ATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTGGCCAAGCCAGTTTTCCCACCTaGTTCCTCTTCCATCAAAGG +
Preference number: 5 (lower is better)
Translates to: MGVQESPPRTAGSGSSGQASFPT*FLFHQR
Trigger: CCTTTGATGGAAGAGGAACAAGGTGGGAAAACTGGC...TTGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp CTGGCCTGTAGAGGCGATTACATAGCTGGGCTGCTGGGCCGGCTGTGGCATAAGGGAAACCATCACGCTTaGCACCGGAGTTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LACRGDYIAGLLGRLWHKGNHHA*HRSSLL
Trigger: CAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCC...CTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp GACCTGATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCTACCTGCCAACCAGCATaGCTCATACTTGCACAGTTT +
Preference number: 5 (lower is better)
Translates to: DLMGVQESPPRTAGSGSSTCQPA*LILAQF
Trigger: AAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGT...AGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS GCA 90 bp GCCGTTCTCTGGAGTGGCCGTCTCCTGCTCAGTCCCTCCTTCCTCTaGTATTGCCTGATTCAGGTCTCCTTGCTCAGACATTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: AVLWSGRLLLSPSFL*YCLIQVSLLRHSPR
Trigger: TCTGGGAGAATGTCTGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTCCAGAGAACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000187397.8
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000413378.5
ENST00000414496.5
ENST00000417925.5
ENST00000419330.5
ENST00000421492.5
ENST00000427542.5
ENST00000428373.5
ENST00000432450.5
ENST00000432682.5
ENST00000434383.6
ENST00000436702.5
ENST00000438071.1
ENST00000438577.5
ENST00000441454.5
ENST00000444190.5
ENST00000449196.5
ENST00000450234.5
ENST00000452563.5
ENST00000474696.5
ENST00000684406.1
CDS GCA 90 bp GGCTGTGTGTGGATTAAGAAGGATGCTTCCAGGCGGGATGCCTGTTaGAGCTTCAAGTGGAAGGAGGATGTAGCTGGTGCTGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: GCVWIKKDASRRDAC*SFKWKEDVAGAAGS
Trigger: GCTCCCAGCAGCACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACAGGCATCCCGCCTGGAAGCATCCTTCTTAATCCACACACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp GGACCTGATGGGGGTTCAGGAGTCTCCCCCGAGGACTGCCGGCTCAGGGTCATCCCTGATAAGAAGACATaGTTGGGTAGGAAACCATCA +
Preference number: 5 (lower is better)
Translates to: GPDGGSGVSPEDCRLRVIPDKKT*LGRKPS
Trigger: TGATGGTTTCCTACCCAACAATGTCTTCTTATCAGG...GATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp AGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTACCTGCTTTGGACTCGGAACTACCTGCTTaGGACAGCTTCCCGGTACTC +
Preference number: 5 (lower is better)
Translates to: SDPEEPALLEDSELPALDSELPA*DSFPVL
Trigger: GAGTACCGGGAAGCTGTCCAAAGCAGGTAGTTCCGA...GTCCAAAGCAGGTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS GCA 90 bp ACCTGTGTGTGGATTAAGAAGGATGCTTCCAGGCGGGATGCCTGTTaGAGCTTCAAGTGGAAGGAGGATGTAGCTGGTGCTGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: TCVWIKKDASRRDAC*SFKWKEDVAGAAGS
Trigger: GCTCCCAGCAGCACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACAGGCATCCCGCCTGGAAGCATCCTTCTTAATCCACACACAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425289.5
CDS-3UTR CAA 90 bp CTGGCCTGTAGAGGCGATTACATAGCTGGGCTGCTGGGCCGGCTGTGGCATAAGCAGCATTGCTCATACTaGCACAGTTTGTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LACRGDYIAGLLGRLWHKQHCSY*HSLFCS
Trigger: GCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTG...CTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS GCA 90 bp CTGGAGTCCCATGTCCCCATTAACAGTTCGGAATGCCCATCTCCATaGGATTCCCTTACACAGTGTGACACATCGTCAACCCGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: LESHVPINSSECPSP*DSLTQCDTSSTRLG
Trigger: CCCGAGACGGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATGGGACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450234.5
CDS-3UTR CAA 90 bp AAGGGCTGGCCTGTGTGTGGATTAAGAAGGATGCTTCCAGGCGGGATGCCTGTTGGCTTTAGATTGCGGTaGGAACTGTCGGAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: KGWPVCGLRRMLPGGMPVGFRLR*ELSESV
Trigger: CACAGACTCCGACAGTTCCAACCGCAATCTAAAGCC...AACAGGCATCCCGCCTGGAAGCATCCTTCTTAATCCACACACAGGCCAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CAA 90 bp ACTGCTGGAAGACTCGGAACTACCTGCTTTGGACAGCTTCCCGGTACTCCTAGTATGGCGGGCTTTAGATaGCGGTTGGAACTGTCGGAG +
Preference number: 5 (lower is better)
Translates to: TAGRLGTTCFGQLPGTPSMAGFR*RLELSE
Trigger: CTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCAT...ACTAGGAGTACCGGGAAGCTGTCCAAAGCAGGTAGTTCCGAGTCTTCCAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CAA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCTGTGGTGGCTGCTGTaGGGACTGCCCCACCATGGC +
Preference number: 5 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSLWWLL*GLPHHG
Trigger: GCCATGGTGGGGCAGTCCCAACAGCAGCCACCACAG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TGCGGGACAGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTACCTGCTGGTGCTGCTGGTCTaGTTGATGATAACAGATTTT +
Preference number: 5 (lower is better)
Translates to: CGTAILRSLHCWKTRNYLLVLLV*LMITDF
Trigger: AAAATCTGTTATCATCAACAAGACCAGCAGCACCAG...CAGGTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CAA 90 bp AGCGATCCTGAGGAGCCTGCACTGCTGGAAGACTCGGAACTACCTGCTTTGGACTGGTGGTCAGACCACTaGAGTTCATTTTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SDPEEPALLEDSELPALDWWSDH*SSFSEL
Trigger: CAGCTCAGAAAATGAACTCAAGTGGTCTGACCACCA...GTCCAAAGCAGGTAGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CAA 90 bp AGACATTGTTGGGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTTGGTTCTGCTGGGGCAGTCCTaGAGAACCCTGGGTCATTGG +
Preference number: 5 (lower is better)
Translates to: RHCWVGNHHALHRSSLLVLLGQS*RTLGHW
Trigger: CCAATGACCCAGGGTTCTCAAGGACTGCCCCAGCAG...AACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACCCAACAATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS TCA 90 bp CAGCCGCCTCTGCAGTTCCAGTTTCTCCTCTTCATCCAGACTTTCTaGTTTAACAATGCCGTTCTCTGGAGTGGCCGTCTCCTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: QPPLQFQFLLFIQTF*FNNAVLWSGRLLLS
Trigger: ACTGAGCAGGAGACGGCCACTCCAGAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAAGAGGAGAAACTGGAACTGCAGAGGCGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000187397.8
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000413378.5
ENST00000414496.5
ENST00000417925.5
ENST00000427542.5
ENST00000428373.5
ENST00000432450.5
ENST00000432682.5
ENST00000434383.6
ENST00000436702.5
ENST00000438071.1
ENST00000438577.5
ENST00000441454.5
ENST00000444190.5
ENST00000449196.5
ENST00000450234.5
ENST00000452563.5
ENST00000474696.5
ENST00000684406.1
CDS GCA 90 bp CTGGAGTCCCATGTCCCCATTAACAGTTCGGAATGCCCATCTCCATaGGATTCCCTTACACAGTGTGACACATCGTCAACCAGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LESHVPINSSECPSP*DSLTQCDTSSTSFQ
Trigger: CTGGAAGCTGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATGGGACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474696.5
CDS-3UTR CAA 90 bp CACAGCCAGAGCTCTCAGAATTTGACCTGCCAACCAGCATTGCTCATACTTGCACCAAAACTCGCCGTCTaGGTCATGGCGGGCTTTAGA +
Preference number: 5 (lower is better)
Translates to: HSQSSQNLTCQPALLILAPKLAV*VMAGFR
Trigger: TCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTGG...TGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp ACTGCTGGAAGACTCGGAACTACCTGCTTTGGACAGCTTCCCGGTACTCCTAGTTGGGTGGGTTGTATATaGCAGGAGTTCCATCGGGAT +
Preference number: 5 (lower is better)
Translates to: TAGRLGTTCFGQLPGTPSWVGCI*QEFHRD
Trigger: ATCCCGATGGAACTCCTGCAATATACAACCCACCCA...ACTAGGAGTACCGGGAAGCTGTCCAAAGCAGGTAGTTCCGAGTCTTCCAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS-3UTR CAA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGACTGTGGTGGCTGCTGTaGGGACTGCCCCACCATGGC +
Preference number: 5 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARLWWLL*GLPHHG
Trigger: GCCATGGTGGGGCAGTCCCAACAGCAGCCACCACAG...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp ACTGCTGGAAGACTCGGAACTACCTGCTTTGGACAGCTTCCCGGTACTCCTAGTCCTGAGCCATCTCTGTaGCCCCTGTTTTCCACAAAA +
Preference number: 5 (lower is better)
Translates to: TAGRLGTTCFGQLPGTPSPEPSL*PLFSTK
Trigger: TTTTGTGGAAAACAGGGGCAACAGAGATGGCTCAGG...ACTAGGAGTACCGGGAAGCTGTCCAAAGCAGGTAGTTCCGAGTCTTCCAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427590.1
CDS CCA 90 bp TGGCAAGGGGATATACCTGATCCTGAAGACTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGACAGCAAGGCTGCGAGTCAGTTTAC +
Preference number: 5 (lower is better)
Translates to: WQGDIPDPEDFHLLV*QKIPHRQQGCESVY
Trigger: GTAAACTGACTCGCAGCCTTGCTGTCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAAGTCTTCAGGATCAGGTATATCCCCTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432450.5
ENST00000434383.6
ENST00000452563.5
CDS-3UTR CAA 90 bp TCTGACTCTGAGGTGGCTGCTGCACTCCTATTAGGCCTTGGAATCCCTGTTGACTGGTGGTCAGACCACTaGAGTTCATTTTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SDSEVAAALLLGLGIPVDWWSDH*SSFSEL
Trigger: CAGCTCAGAAAATGAACTCAAGTGGTCTGACCACCA...GTCAACAGGGATTCCAAGGCCTAATAGGAGTGCAGCAGCCACCTCAGAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACTGTGGTGGCTGCTGTaGGGACTGCCCCACCATGGC +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCILWWLL*GLPHHG
Trigger: GCCATGGTGGGGCAGTCCCAACAGCAGCCACCACAG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp ATACTTGCACAGTTTGTTCTGCAGCTAGCTGACATCACTGGGACAGTGCTGGAGTGCCTGTGGCATCTGTaGACTCCTCTGAGCGTTGTA +
Preference number: 5 (lower is better)
Translates to: ILAQFVLQLADITGTVLECLWHL*TPLSVV
Trigger: TACAACGCTCAGAGGAGTCAACAGATGCCACAGGCA...CTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS TCA 90 bp TGTGACACATCGTCAACCAGCTTCCAGCAAATCACGTTCACAGCTTaGTCCAGCTCCACCTGTCTCAAGCTGCCTGCTTCTTCTCTAATG +
Preference number: 5 (lower is better)
Translates to: CDTSSTSFQQITFTA*SSSTCLKLPASSLM
Trigger: CATTAGAGAAGAAGCAGGCAGCTTGAGACAGGTGGAGCTGGATCAAGCTGTGAACGTGATTTGCTGGAAGCTGGTTGACGATGTGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474696.5
CDS GCA 90 bp GATCAGAGACAACTGGAGTCCCATGTCCCCATTAACAGTTCGGAATaGCCATCTCCATGCGATTCCCTTACACAGTGTGACACATCGTCA +
Preference number: 5 (lower is better)
Translates to: DQRQLESHVPINSSE*PSPCDSLTQCDTSS
Trigger: TGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATGGGACTCCAGTTGTCTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000187397.8
ENST00000396482.6
ENST00000412048.5
ENST00000413378.5
ENST00000414496.5
ENST00000417925.5
ENST00000419330.5
ENST00000421492.5
ENST00000427542.5
ENST00000428373.5
ENST00000432450.5
ENST00000432682.5
ENST00000438577.5
ENST00000444190.5
ENST00000449196.5
ENST00000450234.5
ENST00000452563.5
ENST00000474696.5
ENST00000684406.1
CDS GCA 90 bp CTGGAGTCCCATGTCCCCATTAACAGTTCGGAATGCCCATCTCCATaGGATTCCCTTACACAGTGTGACACATCGTCAACACTAATGACC +
Preference number: 5 (lower is better)
Translates to: LESHVPINSSECPSP*DSLTQCDTSSTLMT
Trigger: GGTCATTAGTGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATGGGACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000432450.5
ENST00000432682.5
CDS GCA 90 bp CTGGAGTCCCATGTCCCCATTAACAGTTCGGAATGCCCATCTCCATaGGATTCCCTTACACAGTGTGACACATCGTCAACCTTGATCGAA +
Preference number: 5 (lower is better)
Translates to: LESHVPINSSECPSP*DSLTQCDTSSTLIE
Trigger: TTCGATCAAGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATGGGACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421492.5
ENST00000428373.5
ENST00000684406.1
CDS GCA 90 bp CTGGAGTCCCATGTCCCCATTAACAGTTCGGAATGCCCATCTCCATaGGATTCCCTTACACAGTGTGACACATCGTCAACCCTACATCTT +
Preference number: 5 (lower is better)
Translates to: LESHVPINSSECPSP*DSLTQCDTSSTLHL
Trigger: AAGATGTAGGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATGGGACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444190.5
CDS GCA 90 bp CTGGAGTCCCATGTCCCCATTAACAGTTCGGAATGCCCATCTCCATaGGATTCCCTTACACAGTGTGACACATCGTCAACCTTGAAAACC +
Preference number: 5 (lower is better)
Translates to: LESHVPINSSECPSP*DSLTQCDTSSTLKT
Trigger: GGTTTTCAAGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATGGGACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449196.5
CDS-3UTR CAA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCCTGAGCCATCTCTGTaGCCCCGAAAGAGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSPEPSL*PRKSCL
Trigger: AAGACAGCTCTTTCGGGGCAACAGAGATGGCTCAGG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000187397.8
ENST00000417925.5
CDS-3UTR CAA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATGGCGGGCTTTAGATaGCGGTTGGAACTGTCGGAG +
Preference number: 5 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSMAGFR*RLELSE
Trigger: CTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCAT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GGTAGGAAACCATCACGCTTTGCACCGGAGTTCCTTGTTGGTTATTTATCACGTATGGCGGGCTTTAGATaGCGGTTGGAACTGTCGGAG +
Preference number: 5 (lower is better)
Translates to: GRKPSRFAPEFLVGYLSRMAGFR*RLELSE
Trigger: CTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCAT...ACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp AATTTGACCTGCCAACCAGCATTGCTCATACTTGCACAGTTTGTTCTGCAGCTATGGCTGGTAACCTGCTaGCTGTGCTGCCTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: NLTCQPALLILAQFVLQLWLVTC*LCCLWH
Trigger: ATGCCACAGGCAGCACAGCAAGCAGGTTACCAGCCA...TAGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACTGCTGGGGCAGTCCTaGAGAACCCTGGGTCATTGG +
Preference number: 5 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKLLGQS*RTLGHW
Trigger: CCAATGACCCAGGGTTCTCAAGGACTGCCCCAGCAG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGACTGCTGGGGCAGTCCTaGAGAACCCTGGGTCATTGG +
Preference number: 5 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARLLGQS*RTLGHW
Trigger: CCAATGACCCAGGGTTCTCAAGGACTGCCCCAGCAG...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGGGGAGCACGCGAGTGTaGCTGTCTATCTTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKGSTRV*LSIFLC
Trigger: ACACAGAAAGATAGACAGCAACACTCGCGTGCTCCC...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS GCA 90 bp CTGGAGTCCCATGTCCCCATTAACAGTTCGGAATGCCCATCTCCATaGGATTCCCTTACACAGTGTGACACATCGTCAACCTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: LESHVPINSSECPSP*DSLTQCDTSSTFPN
Trigger: ATTTGGAAAGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATGGGACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000414496.5
ENST00000452563.5
CDS GCA 90 bp CTGGAGTCCCATGTCCCCATTAACAGTTCGGAATGCCCATCTCCATaGGATTCCCTTACACAGTGTGACACATCGTCAACCATAAGAAGA +
Preference number: 5 (lower is better)
Translates to: LESHVPINSSECPSP*DSLTQCDTSSTIRR
Trigger: TCTTCTTATGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATGGGACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419330.5
CDS GCA 90 bp CTGGAGTCCCATGTCCCCATTAACAGTTCGGAATGCCCATCTCCATaGGATTCCCTTACACAGTGTGACACATCGTCAACCATATCCAAT +
Preference number: 5 (lower is better)
Translates to: LESHVPINSSECPSP*DSLTQCDTSSTISN
Trigger: ATTGGATATGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATGGGACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438577.5
CDS CCA 90 bp TCCTGTCAGTTGCTGGTGCGACAAGATCCTGTGGAAGGAAGTCTTTaGCAGGCAGCTCTAGTGAAGCTATCCCAACTAAATGCTACTTCT +
Preference number: 5 (lower is better)
Translates to: SCQLLVRQDPVEGSL*QAALVKLSQLNATS
Trigger: AGAAGTAGCATTTAGTTGGGATAGCTTCACTAGAGCTGCCTGCCAAAGACTTCCTTCCACAGGATCTTGTCGCACCAGCAACTGACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396481.6
ENST00000434383.6
CDS CCA 90 bp TATTCTTGGCTGCAATCTGATCCTGAAGACTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGACAGCAAGGCTGCGAGTCAGTTTAC +
Preference number: 5 (lower is better)
Translates to: YSWLQSDPEDFHLLV*QKIPHRQQGCESVY
Trigger: GTAAACTGACTCGCAGCCTTGCTGTCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAAGTCTTCAGGATCAGATTGCAGCCAAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414496.5
CDS-3UTR CAA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGCTGATTCAGGTCTCCTaGCTCAGACATTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: FGELRGKTSPTRKERGYLLIQVS*LRHSPR
Trigger: TCTGGGAGAATGTCTGAGCAAGGAGACCTGAATCAG...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp GTTCTCTGGGATTCAGTCCGCACATTTTGTAAGTGCCGGTGGTACCTAATGAAGCTGATTCAGGTCTCCTaGCTCAGACATTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: VLWDSVRTFCKCRWYLMKLIQVS*LRHSPR
Trigger: TCTGGGAGAATGTCTGAGCAAGGAGACCTGAATCAG...CTTCATTAGGTACCACCGGCACTTACAAAATGTGCGGACTGAATCCCAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGCTCCTTCCTCTGCTATaGCCTGATTCAGGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: FGELRGKTSPTRKERGYLLLPLL*PDSGLL
Trigger: AAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAG...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTGACTCGGAACCTGCTTaGGACAGCTTCCCGGTACTC +
Preference number: 5 (lower is better)
Translates to: SSIKGHEKYLKKCTTARADSEPA*DSFPVL
Trigger: GAGTACCGGGAAGCTGTCCAAAGCAGGTTCCGAGTC...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCTGCCTGTGGCATCTGTaGACTCCTCTGAGCGTTGTA +
Preference number: 5 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSCLWHL*TPLSVV
Trigger: TACAACGCTCAGAGGAGTCAACAGATGCCACAGGCA...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATGGCTGGTAACCTGCTaGCTGTGCTGCCTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKWLVTC*LCCLWH
Trigger: ATGCCACAGGCAGCACAGCAAGCAGGTTACCAGCCA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS GCA 90 bp CAAACAACAGAAGCCAAGGGAAAGGGTTCAAATCAAAGCAGAGCGTaGAGACTCCATGCGATCCACGTTAAGAATGGGAGAGCCATAAAG +
Preference number: 5 (lower is better)
Translates to: QTTEAKGKGSNQSRA*RLHAIHVKNGRAIK
Trigger: CTTTATGGCTCTCCCATTCTTAACGTGGATCGCATGGAGTCTGCACGCTCTGCTTTGATTTGAACCCTTTCCCTTGGCTTCTGTTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481854.1
CDS CCA 90 bp AACAAGATTTTATGCCCTTTGGTGCAGAATTCCTGCTGTAGGTCTTaGCGACTTACTAGCGGCTTCTGTCGTTCTACGCCAGGAAAATCC +
Preference number: 5 (lower is better)
Translates to: NKILCPLVQNSCCRS*RLTSGFCRSTPGKS
Trigger: GGATTTTCCTGGCGTAGAACGACAGAAGCCGCTAGTAAGTCGCCAAGACCTACAGCAGGAATTCTGCACCAAAGGGCATAAAATCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000187397.8
ENST00000396482.6
ENST00000412048.5
ENST00000413378.5
ENST00000414496.5
ENST00000417925.5
ENST00000419330.5
ENST00000427542.5
ENST00000428373.5
ENST00000432450.5
ENST00000438577.5
ENST00000444190.5
ENST00000449196.5
ENST00000450234.5
ENST00000452563.5
ENST00000474696.5
ENST00000684406.1
CDS-3UTR CAA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCTGATTCAGGTCTCCTaGCTCAGACATTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSLIQVS*LRHSPR
Trigger: TCTGGGAGAATGTCTGAGCAAGGAGACCTGAATCAG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCTCCTTCCTCTGCTATaGCCTGATTCAGGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSLLPLL*PDSGLL
Trigger: AAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGACCAAAACTCGCCGTCTaGGTCATGGCGGGCTTTAGA +
Preference number: 5 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARPKLAV*VMAGFR
Trigger: TCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTGG...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGACTCGGAACCTGCTTaGGACAGCTTCCCGGTACTC +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCIDSEPA*DSFPVL
Trigger: GAGTACCGGGAAGCTGTCCAAAGCAGGTTCCGAGTC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATATGGCTGGTAACCTGCTaGCTGTGCTGCCTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCIWLVTC*LCCLWH
Trigger: ATGCCACAGGCAGCACAGCAAGCAGGTTACCAGCCA...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp CACAGCCAGAGCTCTCAGAATTTGACCTGCCAACCAGCATTGCTCATACTTGCACACCGGAGTTCCTTGTaGGTTATTTATCACGTTCTG +
Preference number: 5 (lower is better)
Translates to: HSQSSQNLTCQPALLILAHRSSL*VIYHVL
Trigger: CAGAACGTGATAAATAACCAACAAGGAACTCCGGTG...TGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTGGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp ATACTTGCACAGTTTGTTCTGCAGCTAGCTGACATCACTGGGACAGTGCTGGAGGATAAGAAGACATTGTaGGGTAGGAAACCATCACGC +
Preference number: 5 (lower is better)
Translates to: ILAQFVLQLADITGTVLEDKKTL*GRKPSR
Trigger: GCGTGATGGTTTCCTACCCAACAATGTCTTCTTATC...CTCCAGCACTGTCCCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457165.5
CDS-3UTR CAA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCAGAGCTCTCAGAATTaGACCTGCCAACCAGCATTG +
Preference number: 5 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSQSSQN*TCQPAL
Trigger: CAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCCAAGCTCCTGTCAGTaGCTGGTGCGACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: LVQPYQKRAFEENSALLCPSSCQ*LVRQDP
Trigger: AGGATCTTGTCGCACCAGCAACTGACAGGAGCTTGG...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396481.6
ENST00000441454.5
CDS-3UTR CAA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTGGGAAAGTGCTGCGTaGGAGACACAGGTAGGAGGT +
Preference number: 5 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAWESAA*ETQVGG
Trigger: ACCTCCTACCTGTGTCTCCAACGCAGCACTTTCCCA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATGGGAAAGTGCTGCGTaGGAGACACAGGTAGGAGGT +
Preference number: 5 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKWESAA*ETQVGG
Trigger: ACCTCCTACCTGTGTCTCCAACGCAGCACTTTCCCA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCCGCGGGATTCTCGCTTaGCTGCGCTCTGCTCTCAAA +
Preference number: 5 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCRGILA*LRSALK
Trigger: TTTGAGAGCAGAGCGCAGCAAAGCGAGAATCCCGCG...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS CCA 90 bp GTAAATGAATTGATTCCTGATCCTGAAGACTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGACAGCAAGGCTGCGAGTCAGTTTAC +
Preference number: 5 (lower is better)
Translates to: VNELIPDPEDFHLLV*QKIPHRQQGCESVY
Trigger: GTAAACTGACTCGCAGCCTTGCTGTCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAAGTCTTCAGGATCAGGAATCAATTCATTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000187397.8
ENST00000413378.5
ENST00000417925.5
ENST00000438577.5
ENST00000444190.5
ENST00000450234.5
ENST00000684406.1
CDS-3UTR CAA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCCTCCTTCCTCTGCTATaGCCTGATTCAGGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: WFSLIKREPLRKIQHYCALLPLL*PDSGLL
Trigger: AAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAG...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCGGATTTTCTTCTTTCTaGATTCTGAGCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSGFSSF*ILSLQP
Trigger: CGGCTGGAGGCTCAGAATCAAGAAAGAAGAAAATCC...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGGCTTTAGATTGCGGTaGGAACTGTCGGAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARGFRLR*ELSESV
Trigger: CACAGACTCCGACAGTTCCAACCGCAATCTAAAGCC...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAATGGCGGGCTTTAGATaGCGGTTGGAACTGTCGGAG +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCIMAGFR*RLELSE
Trigger: CTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCAT...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACCAAAACTCGCCGTCTaGGTCATGGCGGGCTTTAGA +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCIPKLAV*VMAGFR
Trigger: TCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTGG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTTGCCTGTGGCATCTGTaGACTCCTCTGAGCGTTGTA +
Preference number: 5 (lower is better)
Translates to: SSIKGHEKYLKKCTTARACLWHL*TPLSVV
Trigger: TACAACGCTCAGAGGAGTCAACAGATGCCACAGGCA...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATGCCTGTGGCATCTGTaGACTCCTCTGAGCGTTGTA +
Preference number: 5 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKCLWHL*TPLSVV
Trigger: TACAACGCTCAGAGGAGTCAACAGATGCCACAGGCA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCCAGCATTGCTCATACTaGCACAGTTTGTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSQHCSY*HSLFCS
Trigger: GCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTG...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCACCTGCCAACCAGCATaGCTCATACTTGCACAGTTT +
Preference number: 5 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSTCQPA*LILAQF
Trigger: AAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGTTTCCTCCTGGTACCTaGTCAAATGGGACAAAAAGC +
Preference number: 5 (lower is better)
Translates to: FGELRGKTSPTRKERGYLFPPGT*SNGTKS
Trigger: GCTTTTTGTCCCATTTGACAAGGTACCAGGAGGAAA...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTATGCTCTCGCTCTCTTaGCGTTCTGGTCTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFMLSLS*RSGLPL
Trigger: GAGAGGGAGACCAGAACGCAAAGAGAGCGAGAGCAT...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CAA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTAAGAGGCAGATGCAGTaGTCCCATCCACACCCCCTT +
Preference number: 5 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFKRQMQ*SHPHPL
Trigger: AAGGGGGTGTGGATGGGACAACTGCATCTGCCTCTT...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438071.1
ENST00000441454.5
CDS GCA 90 bp AGGAAGTCTTTGGCAGGCAGCTCTAGTGAAGCTATCCCAACTAAATaGTACTTCTCCAGGCTCACAATAGTCTATAGACACTGGAAATGG +
Preference number: 5 (lower is better)
Translates to: RKSLAGSSSEAIPTK*YFSRLTIVYRHWKW
Trigger: CCATTTCCAGTGTCTATAGACTATTGTGAGCCTGGAGAAGTAGCATTTAGTTGGGATAGCTTCACTAGAGCTGCCTGCCAAAGACTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396481.6
CDS GCA 90 bp CAGCAGAAACTCCCAGAAACCTTCAGTCCTCAGTTTAGGAACTGCTaGTTAGTTTTCTCACTCATCTTTGAAATGGGAAGAACAGGGCAC +
Preference number: 5 (lower is better)
Translates to: QQKLPETFSPQFRNC*LVFSLIFEMGRTGH
Trigger: GTGCCCTGTTCTTCCCATTTCAAAGATGAGTGAGAAAACTAAGCAGCAGTTCCTAAACTGAGGACTGAAGGTTTCTGGGAGTTTCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463970.5
CDS-3UTR CAA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGAAGATTTTATGCCCTTaGGTGCAGAATTCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: FGELRGKTSPTRKERGYLKILCP*VQNSCC
Trigger: ACAGCAGGAATTCTGCACCAAAGGGCATAAAATCTT...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR CAA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACCTGATTCAGGTCTCCTaGCTCAGACATTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYLIQVS*LRHSPR
Trigger: TCTGGGAGAATGTCTGAGCAAGGAGACCTGAATCAG...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGACTGATTCAGGTCTCCTaGCTCAGACATTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARLIQVS*LRHSPR
Trigger: TCTGGGAGAATGTCTGAGCAAGGAGACCTGAATCAG...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACCTCCTTCCTCTGCTATaGCCTGATTCAGGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYLLPLL*PDSGLL
Trigger: AAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAG...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTCCTTCCTCTGCTATaGCCTGATTCAGGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: LVQPYQKRAFEENSALLCLLPLL*PDSGLL
Trigger: AAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAG...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTCTCCTTCCTCTGCTATaGCCTGATTCAGGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: QPYQKRAFEENSALLCLLLLPLL*PDSGLL
Trigger: AAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAG...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCGGATTTTCTTCTTTCTaGATTCTGAGCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAGFSSF*ILSLQP
Trigger: CGGCTGGAGGCTCAGAATCAAGAAAGAAGAAAATCC...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp AGGTCTCATTGCATATGTTACTGTCTTCCAAGAGCCTACTGTTTTCCACAAAAACCTGAGCCATCTCTGTaGCCCCGAAAGAGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: RSHCICYCLPRAYCFPQKPEPSL*PRKSCL
Trigger: AAGACAGCTCTTTCGGGGCAACAGAGATGGCTCAGG...TTTTTGTGGAAAACAGTAGGCTCTTGGAAGACAGTAACATATGCAATGAGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR CAA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGACTCGGAACCTGCTTaGGACAGCTTCCCGGTACTC +
Preference number: 5 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLDSEPA*DSFPVL
Trigger: GAGTACCGGGAAGCTGTCCAAAGCAGGTTCCGAGTC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATGGGTGGGTTGTATATaGCAGGAGTTCCATCGGGAT +
Preference number: 5 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKWVGCI*QEFHRD
Trigger: ATCCCGATGGAACTCCTGCAATATACAACCCACCCA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATGGCTGGTAACCTGCTaGCTGTGCTGCCTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLWLVTC*LCCLWH
Trigger: ATGCCACAGGCAGCACAGCAAGCAGGTTACCAGCCA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGCTGCTGGGGCAGTCCTaGAGAACCCTGGGTCATTGG +
Preference number: 5 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVLLGQS*RTLGHW
Trigger: CCAATGACCCAGGGTTCTCAAGGACTGCCCCAGCAG...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTCAGAGCTCTCAGAATTaGACCTGCCAACCAGCATTG +
Preference number: 5 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAQSSQN*TCQPAL
Trigger: CAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTG...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTGCCAGTTTTCCCACCTaGTTCCTCTTCCATCAAAGG +
Preference number: 5 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAASFPT*FLFHQR
Trigger: CCTTTGATGGAAGAGGAACAAGGTGGGAAAACTGGC...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTAATCACGTTCACAGCTaGATCCAGCTCCACCTGTCT +
Preference number: 5 (lower is better)
Translates to: QPYQKRAFEENSALLCLLNHVHS*IQLHLS
Trigger: AGACAGGTGGAGCTGGATCAAGCTGTGAACGTGATT...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000432682.5
CDS-3UTR CAA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCCCTACAAAGCTAGTCTaGGTTTCTGAGCTTGGAACC +
Preference number: 5 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAPTKLV*VSELGT
Trigger: GGTTCCAAGCTCAGAAACCAAGACTAGCTTTGTAGG...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTGGGAAAGTGCTGCGTaGGAGACACAGGTAGGAGGT +
Preference number: 5 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAWESAA*ETQVGG
Trigger: ACCTCCTACCTGTGTCTCCAACGCAGCACTTTCCCA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGATCTGGCCAAACTGTGTaGCCACATCATCTCTCATGG +
Preference number: 5 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARSGQTV*PHHLSW
Trigger: CCATGAGAGATGATGTGGCAACACAGTTTGGCCAGA...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTAAGAGGCAGATGCAGTaGTCCCATCCACACCCCCTT +
Preference number: 5 (lower is better)
Translates to: PYQKRAFEENSALLCLLFKRQMQ*SHPHPL
Trigger: AAGGGGGTGTGGATGGGACAACTGCATCTGCCTCTT...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACTCATGCTTCTTTTATaGCTGAGTGAGGCGCTCGCT +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCILMLLL*LSEALA
Trigger: AGCGAGCGCCTCACTCAGCAATAAAAGAAGCATGAG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR CAA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCTGATTCAGGTCTCCTaGCTCAGACATTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGILIQVS*LRHSPR
Trigger: TCTGGGAGAATGTCTGAGCAAGGAGACCTGAATCAG...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCCTGATTCAGGTCTCCTaGCTCAGACATTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCLIQVS*LRHSPR
Trigger: TCTGGGAGAATGTCTGAGCAAGGAGACCTGAATCAG...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTCTGATTCAGGTCTCCTaGCTCAGACATTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFLIQVS*LRHSPR
Trigger: TCTGGGAGAATGTCTGAGCAAGGAGACCTGAATCAG...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTCCTTCCTCTGCTATaGCCTGATTCAGGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVLLPLL*PDSGLL
Trigger: AAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAG...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTCTCCTTCCTCTGCTATaGCCTGATTCAGGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSLLPLL*PDSGLL
Trigger: AAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAG...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCGGATTTTCTTCTTTCTaGATTCTGAGCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: LVQPYQKRAFEENSALLCGFSSF*ILSLQP
Trigger: CGGCTGGAGGCTCAGAATCAAGAAAGAAGAAAATCC...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp GTGTTGAGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATGTTCACAAAACCTTaGCTCTGGTATTCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: VLSEYLSPQPVFPPCSSSMFTKP*LWYSGA
Trigger: AGCACCAGAATACCAGAGCAAAGGTTTTGTGAACAT...GGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACTCAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACCTGAGCCATCTCTGTaGCCCCGAAAGAGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLPEPSL*PRKSCL
Trigger: AAGACAGCTCTTTCGGGGCAACAGAGATGGCTCAGG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000187397.8
ENST00000417925.5
CDS-3UTR CAA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAATGGCGGGCTTTAGATaGCGGTTGGAACTGTCGGAG +
Preference number: 5 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLMAGFR*RLELSE
Trigger: CTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCAT...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATATCTGGCCAAACTGTGTaGCCACATCATCTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCISGQTV*PHHLSE
Trigger: CTCAGAGAGATGATGTGGCAACACAGTTTGGCCAGA...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGAGAACCCTGGGTCATaGGCACCTGATAAGAAGACA +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCIENPGS*APDKKT
Trigger: TGTCTTCTTATCAGGTGCCAATGACCCAGGGTTCTC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACAGCATTGCTCATACTaGCACAGTTTGTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKQHCSY*HSLFCS
Trigger: GCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTACCTGCCAACCAGCATaGCTCATACTTGCACAGTTT +
Preference number: 5 (lower is better)
Translates to: SSIKGHEKYLKKCTTARATCQPA*LILAQF
Trigger: AAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGT...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCACCAAGCTCCTGTCAGTaGCTGGTGCGACAAGATCCT +
Preference number: 5 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPPSSCQ*LVRQDP
Trigger: AGGATCTTGTCGCACCAGCAACTGACAGGAGCTTGG...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR CAA 90 bp TTTGGGGAGCTGAGAGGTAAGACATCTCCAACAAGGAAGGAGAGAGGATACTTGAAGGAGAGAGGATACTaGGGATTATATTTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: FGELRGKTSPTRKERGYLKERGY*GLYLVQ
Trigger: CTGAACCAAATATAATCCCAAGTATCCTCTCTCCTT...CAAGTATCCTCTCTCCTTCCTTGTTGGAGATGTCTTACCTCTCAGCTCCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTCCTACAAAGCTAGTCTaGGTTTCTGAGCTTGGAACC +
Preference number: 5 (lower is better)
Translates to: QPYQKRAFEENSALLCLLPTKLV*VSELGT
Trigger: GGTTCCAAGCTCAGAAACCAAGACTAGCTTTGTAGG...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCAATCCAAAGAGAGGCTaGCAGGCTCTCATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVNPKRG*QALILS
Trigger: GGAGAGAATGAGAGCCTGCAAGCCTCTCTTTGGATT...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTAATCCAAAGAGAGGCTaGCAGGCTCTCATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFNPKRG*QALILS
Trigger: GGAGAGAATGAGAGCCTGCAAGCCTCTCTTTGGATT...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTAATCCAAAGAGAGGCTaGCAGGCTCTCATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSNPKRG*QALILS
Trigger: GGAGAGAATGAGAGCCTGCAAGCCTCTCTTTGGATT...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTCTGATTCAGGTCTCCTaGCTCAGACATTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: PYQKRAFEENSALLCLLFLIQVS*LRHSPR
Trigger: TCTGGGAGAATGTCTGAGCAAGGAGACCTGAATCAG...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp TCCTGGTACCTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCGGATTTTCTTCTTTCTaGATTCTGAGCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: SWYLVKWDKKQIKSIKAVGFSSF*ILSLQP
Trigger: CGGCTGGAGGCTCAGAATCAAGAAAGAAGAAAATCC...GACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAGGTACCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAGGATTTTCTTCTTTCTaGATTCTGAGCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCIGFSSF*ILSLQP
Trigger: CGGCTGGAGGCTCAGAATCAAGAAAGAAGAAAATCC...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGGCTTTAGATTGCGGTaGGAACTGTCGGAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLGFRLR*ELSESV
Trigger: CACAGACTCCGACAGTTCCAACCGCAATCTAAAGCC...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGCCAAAACTCGCCGTCTaGGTCATGGCGGGCTTTAGA +
Preference number: 5 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVPKLAV*VMAGFR
Trigger: TCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTGG...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTGGGTGGGTTGTATATaGCAGGAGTTCCATCGGGAT +
Preference number: 5 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAWVGCI*QEFHRD
Trigger: ATCCCGATGGAACTCCTGCAATATACAACCCACCCA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTCACCGGAGTTCCTTGTaGGTTATTTATCACGTTCTG +
Preference number: 5 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAHRSSL*VIYHVL
Trigger: CAGAACGTGATAAATAACCAACAAGGAACTCCGGTG...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAGGAAACCATCACGCTTaGCACCGGAGTTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLGNHHA*HRSSLL
Trigger: CAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCC...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTGATAAGAAGACATTGTaGGGTAGGAAACCATCACGC +
Preference number: 5 (lower is better)
Translates to: SSIKGHEKYLKKCTTARADKKTL*GRKPSR
Trigger: GCGTGATGGTTTCCTACCCAACAATGTCTTCTTATC...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGAGAACCCTGGGTCATaGGCACCTGATAAGAAGACA +
Preference number: 5 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAENPGS*APDKKT
Trigger: TGTCTTCTTATCAGGTGCCAATGACCCAGGGTTCTC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTAATCACGTTCACAGCTaGATCCAGCTCCACCTGTCT +
Preference number: 5 (lower is better)
Translates to: PYQKRAFEENSALLCLLFNHVHS*IQLHLS
Trigger: AGACAGGTGGAGCTGGATCAAGCTGTGAACGTGATT...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000432682.5
CDS-3UTR CAA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCCCTACAAAGCTAGTCTaGGTTTCTGAGCTTGGAACC +
Preference number: 5 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCPTKLV*VSELGT
Trigger: GGTTCCAAGCTCAGAAACCAAGACTAGCTTTGTAGG...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCCTACAAAGCTAGTCTaGGTTTCTGAGCTTGGAACC +
Preference number: 5 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGIPTKLV*VSELGT
Trigger: GGTTCCAAGCTCAGAAACCAAGACTAGCTTTGTAGG...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTCTGGCCAAACTGTGTaGCCACATCATCTCTCATGG +
Preference number: 5 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLASGQTV*PHHLSW
Trigger: CCATGAGAGATGATGTGGCAACACAGTTTGGCCAGA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCGACACATCGTCAACCTaGATCGAACTGTGGATATCC +
Preference number: 5 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCDTSST*IELWIS
Trigger: GGATATCCACAGTTCGATCAAGGTTGACGATGTGTC...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CAA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTCCTGAGCCATCTCTGTaGCCCCTGTTTTCCACAAAA +
Preference number: 5 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAPEPSL*PLFSTK
Trigger: TTTTGTGGAAAACAGGGGCAACAGAGATGGCTCAGG...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444190.5
CDS-3UTR CAA 90 bp CAACTGGGGCATTACTTCTCCCAGGGTCTGTCATTCTGCAGAGTTAACATATATTTTGGCAATAAACCTTaGAGGGTCAACATTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QLGHYFSQGLSFCRVNIYFGNKP*RVNISR
Trigger: CCTGGAAATGTTGACCCTCAAAGGTTTATTGCCAAA...ATATATGTTAACTCTGCAGAATGACAGACCCTGGGAGAAGTAATGCCCCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR CAA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCACTTGTGAATACACCTaGCCATCAAAATGGGTCGAC +
Preference number: 5 (lower is better)
Translates to: LVQPYQKRAFEENSALLCTCEYT*PSKWVD
Trigger: GTCGACCCATTTTGATGGCAAGGTGTATTCACAAGT...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR CAA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACCAAGATTTTATGCCCTaGCCATCAAAATGGGTCGAC +
Preference number: 5 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYQDFMP*PSKWVD
Trigger: GTCGACCCATTTTGATGGCAAGGGCATAAAATCTTG...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000436702.5
CDS-3UTR CAA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACTGATTCAGGTCTCCTaGCTCAGACATTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLLIQVS*LRHSPR
Trigger: TCTGGGAGAATGTCTGAGCAAGGAGACCTGAATCAG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACTCCTTCCTCTGCTATaGCCTGATTCAGGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLLLPLL*PDSGLL
Trigger: AAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGGATTTTCTTCTTTCTaGATTCTGAGCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAGFSSF*ILSLQP
Trigger: CGGCTGGAGGCTCAGAATCAAGAAAGAAGAAAATCC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTGGATTTTCTTCTTTCTaGATTCTGAGCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: PYQKRAFEENSALLCLLFGFSSF*ILSLQP
Trigger: CGGCTGGAGGCTCAGAATCAAGAAAGAAGAAAATCC...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAAGATTTATCCTCCTCTaGCAGGCTGGAAAAACTGGA +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCIRFILL*QAGKTG
Trigger: TCCAGTTTTTCCAGCCTGCAAGAGGAGGATAAATCT...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACTGGTGCTGCTGGTCTaGTTGATGATAACAGATTTT +
Preference number: 5 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKLVLLV*LMITDF
Trigger: AAAATCTGTTATCATCAACAAGACCAGCAGCACCAG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTTGGTGGTCAGACCACTaGAGTTCATTTTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAWWSDH*SSFSEL
Trigger: CAGCTCAGAAAATGAACTCAAGTGGTCTGACCACCA...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTATGGGTGGGTTGTATATaGCAGGAGTTCCATCGGGAT +
Preference number: 5 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLWVGCI*QEFHRD
Trigger: ATCCCGATGGAACTCCTGCAATATACAACCCACCCA...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TCCTCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGATTGCACCGGAGTTCCTaGTTGGTTATTTATCACGTT +
Preference number: 5 (lower is better)
Translates to: SSSIKGHEKYLKKCTTARLHRSS*LVIYHV
Trigger: AACGTGATAAATAACCAACAAGGAACTCCGGTGCAA...TCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAACCTGATAAGAAGACATaGTTGGGTAGGAAACCATCA +
Preference number: 5 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKPDKKT*LGRKPS
Trigger: TGATGGTTTCCTACCCAACAATGTCTTCTTATCAGG...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCAAGGAGAGAGGATACTaGGGATTATATTTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: WFSLIKREPLRKIQHYCAKERGY*GLYLVQ
Trigger: CTGAACCAAATATAATCCCAAGTATCCTCTCTCCTT...GGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp GCAGGAACAAAGCACCATTTACACCTTATTTCTCTGCACCAATTGTATGGATACTTTCCTCCTGGTACCTaGTCAAATGGGACAAAAAGC +
Preference number: 5 (lower is better)
Translates to: AGTKHHLHLISLHQLYGYFPPGT*SNGTKS
Trigger: GCTTTTTGTCCCATTTGACAAGGTACCAGGAGGAAA...GTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTTCCTCCTGGTACCTaGTCAAATGGGACAAAAAGC +
Preference number: 5 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFFPPGT*SNGTKS
Trigger: GCTTTTTGTCCCATTTGACAAGGTACCAGGAGGAAA...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAAATCCAAAGAGAGGCTaGCAGGCTCTCATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPNPKRG*QALILS
Trigger: GGAGAGAATGAGAGCCTGCAAGCCTCTCTTTGGATT...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATCTGGCCAAACTGTGTaGCCACATCATCTCTCATGG +
Preference number: 5 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLSGQTV*PHHLSW
Trigger: CCATGAGAGATGATGTGGCAACACAGTTTGGCCAGA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTCTGATTCAGGTCTCCTaGCTCAGACATTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPLIQVS*LRHSPR
Trigger: TCTGGGAGAATGTCTGAGCAAGGAGACCTGAATCAG...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGGATTTTCTTCTTTCTaGATTCTGAGCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPGFSSF*ILSLQP
Trigger: CGGCTGGAGGCTCAGAATCAAGAAAGAAGAAAATCC...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAGATTTATCCTCCTCTaGCAGGCTGGAAAAACTGGA +
Preference number: 5 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLARFILL*QAGKTG
Trigger: TCCAGTTTTTCCAGCCTGCAAGAGGAGGATAAATCT...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAATGTTCACAAAACCTTaGCTCTGGTATTCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCIMFTKP*LWYSGA
Trigger: AGCACCAGAATACCAGAGCAAAGGTTTTGTGAACAT...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTATGGTGGTCAGACCACTaGAGTTCATTTTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLWWSDH*SSFSEL
Trigger: CAGCTCAGAAAATGAACTCAAGTGGTCTGACCACCA...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTATGGTGGTCAGACCACTaGAGTTCATTTTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLWWSDH*SSFSEL
Trigger: CAGCTCAGAAAATGAACTCAAGTGGTCTGACCACCA...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATATTGCACCGGAGTTCCTaGTTGGTTATTTATCACGTT +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCILHRSS*LVIYHV
Trigger: AACGTGATAAATAACCAACAAGGAACTCCGGTGCAA...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTGATAAGAAGACATTGTaGGGTAGGAAACCATCACGC +
Preference number: 5 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLADKKTL*GRKPSR
Trigger: GCGTGATGGTTTCCTACCCAACAATGTCTTCTTATC...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATACCTGATAAGAAGACATaGTTGGGTAGGAAACCATCA +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCIPDKKT*LGRKPS
Trigger: TGATGGTTTCCTACCCAACAATGTCTTCTTATCAGG...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGGAGAACCCTGGGTCATaGGCACCTGATAAGAAGACA +
Preference number: 5 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVENPGS*APDKKT
Trigger: TGTCTTCTTATCAGGTGCCAATGACCCAGGGTTCTC...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACAGCATTGCTCATACTaGCACAGTTTGTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLQHCSY*HSLFCS
Trigger: GCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAACCTGCCAACCAGCATaGCTCATACTTGCACAGTTT +
Preference number: 5 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLTCQPA*LILAQF
Trigger: AAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGCAGAGCTCTCAGAATTaGACCTGCCAACCAGCATTG +
Preference number: 5 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVQSSQN*TCQPAL
Trigger: CAATGCTGGTTGGCAGGTCAAATTCTGAGAGCTCTG...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TTGGTTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCATCAAAAGAGAGCCTTaGAGGAAAATTCAGCACTAC +
Preference number: 5 (lower is better)
Translates to: LVQPYQKRAFEENSALLCIKREP*RKIQHY
Trigger: GTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGAT...GCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp TTCAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACATCAAAAGAGAGCCTTaGAGGAAAATTCAGCACTAC +
Preference number: 5 (lower is better)
Translates to: FSLIKREPLRKIQHYCAYIKREP*RKIQHY
Trigger: GTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGAT...GTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAATCACGTTCACAGCTaGATCCAGCTCCACCTGTCT +
Preference number: 5 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPNHVHS*IQLHLS
Trigger: AGACAGGTGGAGCTGGATCAAGCTGTGAACGTGATT...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000432682.5
CDS TCA 90 bp ATTCTGTTTTGCATAACAAGGTTTGTTCTTTACAGCTACACCGGTTaGTCATCGGTCCGTATTGATAATCCAGCTCAATTTGTGCACAAC +
Preference number: 5 (lower is better)
Translates to: ILFCITRFVLYSYTG*SSVRIDNPAQFVHN
Trigger: GTTGTGCACAAATTGAGCTGGATTATCAATACGGACCGATGATCAACCGGTGTAGCTGTAAAGAACAAACCTTGTTATGCAAAACAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR CAA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTGGATTTTCTTCTTTCTaGATTCTGAGCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPGFSSF*ILSLQP
Trigger: CGGCTGGAGGCTCAGAATCAAGAAAGAAGAAAATCC...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAGGATTTTCTTCTTTCTaGATTCTGAGCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPGFSSF*ILSLQP
Trigger: CGGCTGGAGGCTCAGAATCAAGAAAGAAGAAAATCC...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp TCTTCCATCAAAGGCCATGAGAAATATCTGAAGAAATGTACCACAGCCAGAGCTAAAGCTGTAAATGAATaGATTCCTGATCCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: SSIKGHEKYLKKCTTARAKAVNE*IPDPED
Trigger: GTCTTCAGGATCAGGAATCAATTCATTTACAGCTTT...AGCTCTGGCTGTGGTACATTTCTTCAGATATTTCTCATGGCCTTTGATGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTCTGGTGCTGCTGGTCTaGTTGATGATAACAGATTTT +
Preference number: 5 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLALVLLV*LMITDF
Trigger: AAAATCTGTTATCATCAACAAGACCAGCAGCACCAG...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp AGGTCTCATTGCATATGTTACTGTCTTCCAAGAGCCTACTGTTTTCCACAAAAACTGGTGCTGCTGGTCTaGTTGATGATAACAGATTTT +
Preference number: 5 (lower is better)
Translates to: RSHCICYCLPRAYCFPQKLVLLV*LMITDF
Trigger: AAAATCTGTTATCATCAACAAGACCAGCAGCACCAG...TTTTTGTGGAAAACAGTAGGCTCTTGGAAGACAGTAACATATGCAATGAGACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR CAA 90 bp AGGTCTCATTGCATATGTTACTGTCTTCCAAGAGCCTACTGTTTTCCACAAAAAATGTTCACAAAACCTTaGCTCTGGTATTCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: RSHCICYCLPRAYCFPQKMFTKP*LWYSGA
Trigger: AGCACCAGAATACCAGAGCAAAGGTTTTGTGAACAT...TTTTTGTGGAAAACAGTAGGCTCTTGGAAGACAGTAACATATGCAATGAGACCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR CAA 90 bp AGTGAATACTTAAGTCCTCAGCCAGTTTTCCCACCTTGTTCCTCTTCCATCAAATGGATGCATTCTGTTTaGCTGATTGTCTTCTTTATC +
Preference number: 5 (lower is better)
Translates to: SEYLSPQPVFPPCSSSIKWMHSV*LIVFFI
Trigger: GATAAAGAAGACAATCAGCAAAACAGAATGCATCCA...TTTGATGGAAGAGGAACAAGGTGGGAAAACTGGCTGAGGACTTAAGTATTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR CAA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAGATAAGAAGACATTGTaGGGTAGGAAACCATCACGC +
Preference number: 5 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLDKKTL*GRKPSR
Trigger: GCGTGATGGTTTCCTACCCAACAATGTCTTCTTATC...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTAAGATTTTATGCCCTTaGAGGGTCAACATTTCCAGG +
Preference number: 5 (lower is better)
Translates to: PYQKRAFEENSALLCLLFKILCP*RVNISR
Trigger: CCTGGAAATGTTGACCCTCAAAGGGCATAAAATCTT...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396481.6
CDS-3UTR CAA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTATCAAAAGAGAGCCTTaGAGGAAAATTCAGCACTAC +
Preference number: 5 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFIKREP*RKIQHY
Trigger: GTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGAT...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp GCAGGAACAAAGCACCATTTACACCTTATTTCTCTGCACCAATTGTATGGATACAAGGAGAGAGGATACTaGGGATTATATTTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: AGTKHHLHLISLHQLYGYKERGY*GLYLVQ
Trigger: CTGAACCAAATATAATCCCAAGTATCCTCTCTCCTT...GTATCCATACAATTGGTGCAGAGAAATAAGGTGTAAATGGTGCTTTGTTCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCAAGGAGAGAGGATACTaGGGATTATATTTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCKERGY*GLYLVQ
Trigger: CTGAACCAAATATAATCCCAAGTATCCTCTCTCCTT...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTACAACTTTTGCAGTATaGAGAAATCTCCACCAAAGC +
Preference number: 5 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFTTFAV*RNLHQS
Trigger: GCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp CTTGTCAAATGGGACAAAAAGCAGATTAAGTCTATAAAGGCTGTCCTTCTCTGCACAACTTTTGCAGTATaGAGAAATCTCCACCAAAGC +
Preference number: 5 (lower is better)
Translates to: LVKWDKKQIKSIKAVLLCTTFAV*RNLHQS
Trigger: GCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT...GCAGAGAAGGACAGCCTTTATAGACTTAATCTGCTTTTTGTCCCATTTGACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCATTTCCTCCTGGTACCTaGTCAAATGGGACAAAAAGC +
Preference number: 5 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPFPPGT*SNGTKS
Trigger: GCTTTTTGTCCCATTTGACAAGGTACCAGGAGGAAA...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp CAGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTATTTCTCTGCACCAATaGTATGGATACACTAGACTT +
Preference number: 5 (lower is better)
Translates to: QPYQKRAFEENSALLCLLISLHQ*YGYTRL
Trigger: AAGTCTAGTGTATCCATACAATTGGTGCAGAGAAAT...AAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp TTGGTCCTTTTAAAGAAAGTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCTGGATTTGTTTGTTTaGGCTTTTGGCTTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: LVLLKKVLSMLSVSMRGILDLFV*AFGLAF
Trigger: AAAAGCCAAGCCAAAAGCCAAAACAAACAAATCCAG...AATTCCCCTCATGGAAACAGAGAGCATTGAGAGCACTTTCTTTAAAAGGACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CAA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAACTCAAGATGTGGCATaGATGTTCTGCAGCATCTCT +
Preference number: 5 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPTQDVA*MFCSIS
Trigger: AGAGATGCTGCAGAACATCAATGCCACATCTTGAGT...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441454.5
CDS-3UTR CAA 90 bp GTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTCCTTTCCAAATATCCTaGTCCAGTATCCATAACCAT +
Preference number: 5 (lower is better)
Translates to: VVFSGRRKSYLDEFMSLAPFQIS*SSIHNH
Trigger: ATGGTTATGGATACTGGACAAGGATATTTGGAAAGG...AGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS-3UTR CAA 90 bp GCATACCTAGCAGACATGACAGAAATATGCACCATTAACCAGCTAACGTGTATAAAAGCTGTAAATGAATaGATTCCTGATCCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: AYLADMTEICTINQLTCIKAVNE*IPDPED
Trigger: GTCTTCAGGATCAGGAATCAATTCATTTACAGCTTT...TATACACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGAGATTTATCCTCCTCTaGCAGGCTGGAAAAACTGGA +
Preference number: 5 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVRFILL*QAGKTG
Trigger: TCCAGTTTTTCCAGCCTGCAAGAGGAGGATAAATCT...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTACTGGTGCTGCTGGTCTaGTTGATGATAACAGATTTT +
Preference number: 5 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLLVLLV*LMITDF
Trigger: AAAATCTGTTATCATCAACAAGACCAGCAGCACCAG...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTAATGTTCACAAAACCTTaGCTCTGGTATTCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLMFTKP*LWYSGA
Trigger: AGCACCAGAATACCAGAGCAAAGGTTTTGTGAACAT...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGCACCGGAGTTCCTTGTaGGTTATTTATCACGTTCTG +
Preference number: 5 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVHRSSL*VIYHVL
Trigger: CAGAACGTGATAAATAACCAACAAGGAACTCCGGTG...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp TTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAGCTAAGCTACCTGATAAGAAGACATaGTTGGGTAGGAAACCATCA +
Preference number: 5 (lower is better)
Translates to: FSGRRKSYLDEFMSLAKLPDKKT*LGRKPS
Trigger: TGATGGTTTCCTACCCAACAATGTCTTCTTATCAGG...TAGCTTAGCTAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
CDS-3UTR CAA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTATCAAAAGAGAGCCTTaGAGGAAAATTCAGCACTAC +
Preference number: 5 (lower is better)
Translates to: PYQKRAFEENSALLCLLFIKREP*RKIQHY
Trigger: GTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGAT...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp GTGCTCTCAATGCTCTCTGTTTCCATGAGGGGAATTCAGAGTATTTCAATTAAAATCAAAAGAGAGCCTTaGAGGAAAATTCAGCACTAC +
Preference number: 5 (lower is better)
Translates to: VLSMLSVSMRGIQSISIKIKREP*RKIQHY
Trigger: GTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGAT...TTTAATTGAAATACTCTGAATTCCCCTCATGGAAACAGAGAGCATTGAGAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp CCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTTTAAGGAGAGAGGATACTaGGGATTATATTTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: PYQKRAFEENSALLCLLFKERGY*GLYLVQ
Trigger: CTGAACCAAATATAATCCCAAGTATCCTCTCTCCTT...AAAAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp CAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAGTGTTCTATTTCTCTGCACCAATaGTATGGATACACTAGACTT +
Preference number: 5 (lower is better)
Translates to: QTLGKRYNPYTVYICQCSISLHQ*YGYTRL
Trigger: AAGTCTAGTGTATCCATACAATTGGTGCAGAGAAAT...AGAACACTGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp AGCCTTATCAAAAGAGAGCCTTTGAGGAAAATTCAGCACTACTGTGCCTACTTTATTTCTCTGCACCAATaGTATGGATACACTAGACTT +
Preference number: 5 (lower is better)
Translates to: SLIKREPLRKIQHYCAYFISLHQ*YGYTRL
Trigger: AAGTCTAGTGTATCCATACAATTGGTGCAGAGAAAT...AAAGTAGGCACAGTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGATAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp CCTTCAATTCATCAATTCTTCTTTGCTTTTCCATTACAGCTTTGGTACAATGTGAAGATTTTATGCCCTTaGGTGCAGAATTCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: PSIHQFFFAFPLQLWYNVKILCP*VQNSCC
Trigger: ACAGCAGGAATTCTGCACCAAAGGGCATAAAATCTT...CACATTGTACCAAAGCTGTAATGGAAAAGCAAAGAAGAATTGATGAATTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGATTTTATGCCCTTaGGTGCAGAATTCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPKILCP*VQNSCC
Trigger: ACAGCAGGAATTCTGCACCAAAGGGCATAAAATCTT...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
CDS-3UTR CAA 90 bp GAATTTACAAACATTGGGGAAGCGATACAATCCATATACTGTATACATCTGCCAATCAAAAGAGAGCCTTaGAGGAAAATTCAGCACTAC +
Preference number: 5 (lower is better)
Translates to: EFTNIGEAIQSIYCIHLPIKREP*RKIQHY
Trigger: GTAGTGCTGAATTTTCCTCAAAGGCTCTCTTTTGAT...TGGCAGATGTATACAGTATATGGATTGTATCGCTTCCCCAATGTTTGTAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS-3UTR CAA 90 bp TTTCTTATAGGTCTCATTGCATATGTTACTGTCTTCCAAGAGCCTACTGTTTTCATAATCCAGCTCAATTaGTGCACAACTGAAGGACAA +
Preference number: 5 (lower is better)
Translates to: FLIGLIAYVTVFQEPTVFIIQLN*CTTEGQ
Trigger: TTGTCCTTCAGTTGTGCACAAATTGAGCTGGATTAT...GAAAACAGTAGGCTCTTGGAAGACAGTAACATATGCAATGAGACCTATAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS-3UTR CAA 90 bp ACAGTGGTATTCAGTGGTAGGAGAAAATCTTACCTTGATGAATTCATGTCACTAAAAGCTGTAAATGAATaGATTCCTGATCCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: TVVFSGRRKSYLDEFMSLKAVNE*IPDPED
Trigger: GTCTTCAGGATCAGGAATCAATTCATTTACAGCTTT...TAGTGACATGAATTCATCAAGGTAAGATTTTCTCCTACCACTGAATACCACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
CDS-3UTR CAA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGGAGAGAGGATACTaGGGATTATATTTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPKERGY*GLYLVQ
Trigger: CTGAACCAAATATAATCCCAAGTATCCTCTCTCCTT...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTACAACTTTTGCAGTATaGAGAAATCTCCACCAAAGC +
Preference number: 5 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPTTFAV*RNLHQS
Trigger: GCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAACAACTTTTGCAGTATaGAGAAATCTCCACCAAAGC +
Preference number: 5 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPTTFAV*RNLHQS
Trigger: GCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000432682.5
ENST00000438071.1
ENST00000441454.5
CDS-3UTR CAA 90 bp ACAACTTTTGCAGTATTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCACTTTTGGCTTGGCTTTaGTTGTTGTTGTTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: TTFAVLRNLHQSHKSISPLLAWL*LLLLLL
Trigger: CAACAACAACAACAACAACAAAAGCCAAGCCAAAAG...TGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAATACTGCAAAAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428373.5
CDS-3UTR CAA 90 bp TTGAGAAATCTCCACCAAAGCCATAAAAGTATTTCTCCAAAGTTAAATGCACCTATTTCTCTGCACCAATaGTATGGATACACTAGACTT +
Preference number: 5 (lower is better)
Translates to: LRNLHQSHKSISPKLNAPISLHQ*YGYTRL
Trigger: AAGTCTAGTGTATCCATACAATTGGTGCAGAGAAAT...AGGTGCATTTAACTTTGGAGAAATACTTTTATGGCTTTGGTGGAGATTTCTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000428373.5
ENST00000441454.5
CDS GCA 72 bp CTGCGGCGGCGGCTCGGTCGCGGCTTGTGTCCCCGCTaGCCCTGCTGCTGCTGGTCTCTGCTCCGGACGCGC +
Preference number: 6 (lower is better)
Translates to: LRRRLGRGLCPR*PCCCWSLLRTR
Trigger: GCGCGTCCGGAGCAGAGACCAGCAGCAGCAGGGGCAGCGGGGACACAAGCCGCGACCGAGCCGCCGCCGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CCA 72 bp GCTCAGAAGGTGCCACCGCCGCCTTCTCTGGCCGGCTaGCCGCCGGGAGTGAACGCGCCCCCGCCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: AQKVPPPPSLAG*PPGVNAPPPPV
Trigger: GACAGGAGGCGGGGGCGCGTTCACTCCCGGCGGCCAGCCGGCCAGAGAAGGCGGCGGTGGCACCTTCTGAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS GCA 72 bp CTGCTGCTGGTCTCTGCTCCGGACGCGCTCAGAAGGTaGCACCGCCGCCTTCTCTGGCCGGCTGGCCGCCGG +
Preference number: 6 (lower is better)
Translates to: LLLVSAPDALRR*HRRLLWPAGRR
Trigger: CCGGCGGCCAGCCGGCCAGAGAAGGCGGCGGTGGCACCTTCTGAGCGCGTCCGGAGCAGAGACCAGCAGCAG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CCA 72 bp GGTCGCGGCTTGTGTCCCCGCTGCCCCTGCTGCTGCTaGTCTCTGCTCCGGACGCGCTCAGAAGGTGCCACC +
Preference number: 6 (lower is better)
Translates to: GRGLCPRCPCCC*SLLRTRSEGAT
Trigger: GGTGGCACCTTCTGAGCGCGTCCGGAGCAGAGACCAGCAGCAGCAGGGGCAGCGGGGACACAAGCCGCGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CAA 90 bp GACCAGAGGGCCTGCCATCTGTGGCTGCGGTGGCTGGACCTGCTGTaGGGGCTGCGGGGAGGGCTGCTGCTGTGGTGGCTGCTGTTGGGA +
Preference number: 6 (lower is better)
Translates to: DQRACHLWLRWLDLL*GLRGGLLLWWLLLG
Trigger: TCCCAACAGCAGCCACCACAGCAGCAGCCCTCCCCGCAGCCCCAACAGCAGGTCCAGCCACCGCAGCCACAGATGGCAGGCCCTCTGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
ENST00000684406.1
CDS GCA 72 bp TGGCCGCCGGGAGTGAACGCGCCCCCGCCTCCTGTCTaGTCTTCTGTCCGTCTGCACGTCTGTCAGTCCGAC +
Preference number: 6 (lower is better)
Translates to: WPPGVNAPPPPV*SSVRLHVCQSD
Trigger: GTCGGACTGACAGACGTGCAGACGGACAGAAGAGCAGACAGGAGGCGGGGGCGCGTTCACTCCCGGCGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS GCA 72 bp ACGCGCCCCCGCCTCCTGTCTGCTCTTCTGTCCGTCTaGACGTCTGTCAGTCCGACCGTCTGTGGGTCCGAC +
Preference number: 6 (lower is better)
Translates to: TRPRLLSALLSV*TSVSPTVCGSD
Trigger: GTCGGACCCACAGACGGTCGGACTGACAGACGTGCAGACGGACAGAAGAGCAGACAGGAGGCGGGGGCGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CCA 72 bp CTTCTGTGCCCACAGTCCTCTCCCACTCTGTGCCCCTaGCCGCTTCGCTCGGTAAGAGGAGGGCGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: LLCPQSSPTLCP*PLRSVRGGRVE
Trigger: CTCCACACGCCCTCCTCTTACCGAGCGAAGCGGCCAGGGGCACAGAGTGGGAGAGGACTGTGGGCACAGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CCA 72 bp CATCGTCAACCCGTCTCGGGGGCGCCCCTGGACTCCTaGGGACTCTTGACGAAGCCTTGTTCCACTCCCTCC +
Preference number: 6 (lower is better)
Translates to: HRQPVSGAPLDS*GLLTKPCSTPS
Trigger: GGAGGGAGTGGAACAAGGCTTCGTCAAGAGTCCCCAGGAGTCCAGGGGCGCCCCCGAGACGGGTTGACGATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450234.5
CDS CAA 90 bp GACCGTCTGTGGGTCCGACTAGCAGCTCGGCGCGGGATTCTCGCTTaGCTGCGCTCTGCTCTCAAAGCTGCCACTCTCGCAGGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: DRLWVRLAARRGILA*LRSALKAATLAGCQ
Trigger: CTGGCAGCCTGCGAGAGTGGCAGCTTTGAGAGCAGAGCGCAGCAAAGCGAGAATCCCGCGCCGAGCTGCTAGTCGGACCCACAGACGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS GCA 72 bp CTGCGCTCTGCTCTCAAAGCTGCCACTCTCGCAGGCTaGCAGTCTGTGCGCTGGTCTGTCCGTCCGTCCGAA +
Preference number: 6 (lower is better)
Translates to: LRSALKAATLAG*QSVRWSVRPSE
Trigger: TTCGGACGGACGGACAGACCAGCGCACAGACTGGCAGCCTGCGAGAGTGGCAGCTTTGAGAGCAGAGCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CCA 72 bp TCTGTCCGTCTGCACGTCTGTCAGTCCGACCGTCTGTaGGTCCGACTAGCAGCTCGGCGCGGGATTCTCGCT +
Preference number: 6 (lower is better)
Translates to: SVRLHVCQSDRL*VRLAARRGILA
Trigger: AGCGAGAATCCCGCGCCGAGCTGCTAGTCGGACCCACAGACGGTCGGACTGACAGACGTGCAGACGGACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS GCA 72 bp CGGGATTCTCGCTTTGCTGCGCTCTGCTCTCAAAGCTaGCACTCTCGCAGGCTGCCAGTCTGTGCGCTGGTC +
Preference number: 6 (lower is better)
Translates to: RDSRFAALCSQS*HSRRLPVCALV
Trigger: GACCAGCGCACAGACTGGCAGCCTGCGAGAGTGGCAGCTTTGAGAGCAGAGCGCAGCAAAGCGAGAATCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CAA 72 bp TGGGTCCGACTAGCAGCTCGGCGCGGGATTCTCGCTTaGCTGCGCTCTGCTCTCAAAGCTGCCACTCTCGCA +
Preference number: 6 (lower is better)
Translates to: WVRLAARRGILA*LRSALKAATLA
Trigger: TGCGAGAGTGGCAGCTTTGAGAGCAGAGCGCAGCAAAGCGAGAATCCCGCGCCGAGCTGCTAGTCGGACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS TCA 72 bp GGAATGCCCATCTCCATGCGATTCCCTTACACAGTGTaGCACATCGTCAACCCGTCTCGGGGGCGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: GMPISMRFPYTV*HIVNPSRGRPW
Trigger: CCAGGGGCGCCCCCGAGACGGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450234.5
CDS GCA 72 bp GATGGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTaGTGGAAGACTCGGAACCTGCTTTGGACAGCTTCC +
Preference number: 6 (lower is better)
Translates to: DGCGTAILRSLH*WKTRNLLWTAS
Trigger: GGAAGCTGTCCAAAGCAGGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000425289.5
ENST00000444190.5
ENST00000457165.5
ENST00000684406.1
CDS GCA 72 bp TTTGCGTTCTGGTCTCCCTCTCTCAGGCTGTCTGACTaGTCCCACCTGTCCGTAGCTCTGCCAGTCCCACCC +
Preference number: 6 (lower is better)
Translates to: FAFWSPSLRLSD*SHLSVALPVPP
Trigger: GGGTGGGACTGGCAGAGCTACGGACAGGTGGGAGCAGTCAGACAGCCTGAGAGAGGGAGACCAGAACGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS GCA 72 bp GATGGGTGCGGGACAGCGATCCTGAGGAGCCTGCACTaGTGGAAGACTCGGAACATTCTGGTGCTGCTGGTC +
Preference number: 6 (lower is better)
Translates to: DGCGTAILRSLH*WKTRNILVLLV
Trigger: GACCAGCAGCACCAGAATGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476327.1
CDS GCA 72 bp GGACTGCCGGCTCAGGGTCATCTGGCCAAACTGTGTTaGCACATCATCTCTCTGAGTGACCAGAGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: GLPAQGHLAKLC*HIISLSDQRAC
Trigger: GCAGGCCCTCTGGTCACTCAGAGAGATGATGTGGCAACACAGTTTGGCCAGATGACCCTGAGCCGGCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187397.8
CDS CAA 90 bp CCCCCAAAACTCGCCGTCTTGGTCATGGCGGGCTTTAGATTGCGGTaGGAACTGTCGGAGTCTGTGCTGCTCCAGGCCCTTTGGTGGTCA +
Preference number: 6 (lower is better)
Translates to: PPKLAVLVMAGFRLR*ELSESVLLQALWWS
Trigger: TGACCACCAAAGGGCCTGGAGCAGCACAGACTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000425289.5
ENST00000427590.1
ENST00000444190.5
ENST00000457165.5
ENST00000481854.1
ENST00000684406.1
CDS CAA 90 bp GTGATGCCCCCAAAACTCGCCGTCTTGGTCATGGCGGGCTTTAGATaGCGGTTGGAACTGTCGGAGTCTGTGCTGCTCCAGGCCCTTTGG +
Preference number: 6 (lower is better)
Translates to: VMPPKLAVLVMAGFR*RLELSESVLLQALW
Trigger: CCAAAGGGCCTGGAGCAGCACAGACTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTGGGGGCATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000425289.5
ENST00000427590.1
ENST00000444190.5
ENST00000457165.5
ENST00000481854.1
ENST00000684406.1
CDS CCA 72 bp CCCAAGCTCCCGAGCTCCCAAGCTCCTGTCAGTTGCTaGTGCGACAAGATCCTGTGGAAGGAAGTCTTTGGC +
Preference number: 6 (lower is better)
Translates to: PKLPSSQAPVSC*CDKILWKEVFG
Trigger: GCCAAAGACTTCCTTCCACAGGATCTTGTCGCACCAGCAACTGACAGGAGCTTGGGAGCTCGGGAGCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396481.6
ENST00000434383.6
ENST00000441454.5
CDS GCA 72 bp AAGCTCCCGAGCTCCCAAGCTCCTGTCAGTTGCTGGTaGGACAAGATCCTGTGGAAGGAAGTCTTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: KLPSSQAPVSCW*DKILWKEVFGR
Trigger: CCTGCCAAAGACTTCCTTCCACAGGATCTTGTCGCACCAGCAACTGACAGGAGCTTGGGAGCTCGGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396481.6
ENST00000434383.6
ENST00000441454.5
CDS GCA 72 bp GGACTGCCGGCTCAGGGTCATCTGGCCAAACTGTGTTaGCACATCATCTCTCATGGGAAAGTGCTGCGTTGG +
Preference number: 6 (lower is better)
Translates to: GLPAQGHLAKLC*HIISHGKVLRW
Trigger: CCAACGCAGCACTTTCCCATGAGAGATGATGTGGCAACACAGTTTGGCCAGATGACCCTGAGCCGGCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
ENST00000684406.1
CDS CAA 72 bp CCAAAACTCGCCGTCTTGGTCATGGCGGGCTTTAGATaGCGGTTGGAACTGTCGGAGTCTGTGCTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: PKLAVLVMAGFR*RLELSESVLLQ
Trigger: CTGGAGCAGCACAGACTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCATGACCAAGACGGCGAGTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000187397.8
ENST00000417925.5
ENST00000425289.5
ENST00000427590.1
ENST00000444190.5
ENST00000457165.5
ENST00000481854.1
ENST00000684406.1
CDS GCA 72 bp TCTCCCAAGCTCCCGAGCTCCCAAGCTCCTGTCAGTTaGTGGTGCGACAAGATCCTGTGGAAGGAAGTCTTT +
Preference number: 6 (lower is better)
Translates to: SPKLPSSQAPVS*WCDKILWKEVF
Trigger: AAAGACTTCCTTCCACAGGATCTTGTCGCACCAGCAACTGACAGGAGCTTGGGAGCTCGGGAGCTTGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396481.6
ENST00000434383.6
ENST00000441454.5
CDS CAA 72 bp AGGACTGCCGGCTCAGGGTCATCTGGCCAAACTGTGTaGCCACATCATCTCTCATGGGAAAGTGCTGCGTTG +
Preference number: 6 (lower is better)
Translates to: RTAGSGSSGQTV*PHHLSWESAAL
Trigger: CAACGCAGCACTTTCCCATGAGAGATGATGTGGCAACACAGTTTGGCCAGATGACCCTGAGCCGGCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
ENST00000684406.1
CDS CAA 72 bp GTGCCTCTCCCTGCCTACTTAATGCTCTCGCTCTCTTaGCGTTCTGGTCTCCCTCTCTCAGGCTGTCTGACT +
Preference number: 6 (lower is better)
Translates to: VPLPAYLMLSLS*RSGLPLSGCLT
Trigger: AGTCAGACAGCCTGAGAGAGGGAGACCAGAACGCAAAGAGAGCGAGAGCATTAAGTAGGCAGGGAGAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428373.5
ENST00000684406.1
CDS CCA 72 bp GGAAAGTGCTGCGTTGGAGACACAGGTAGGAGGTGCTaGGGAGGAAAAGAGACTGCTGGATATTGCACTGAC +
Preference number: 6 (lower is better)
Translates to: GKCCVGDTGRRC*GGKETAGYCTD
Trigger: GTCAGTGCAATATCCAGCAGTCTCTTTTCCTCCCCAGCACCTCCTACCTGTGTCTCCAACGCAGCACTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
ENST00000462173.1
ENST00000684406.1
CDS CAA 72 bp GTGTTGCCACATCATCTCTCATGGGAAAGTGCTGCGTaGGAGACACAGGTAGGAGGTGCTGGGGAGGAAAAG +
Preference number: 6 (lower is better)
Translates to: VLPHHLSWESAA*ETQVGGAGEEK
Trigger: CTTTTCCTCCCCAGCACCTCCTACCTGTGTCTCCAACGCAGCACTTTCCCATGAGAGATGATGTGGCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417925.5
ENST00000444190.5
ENST00000457165.5
ENST00000684406.1
CDS TCA 72 bp TCGTCAACCAGCTTCCAGCAAATCACGTTCACAGCTTaGTCCAGCTCCACCTGTCTCAAGCTGCCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: SSTSFQQITFTA*SSSTCLKLPAS
Trigger: AGAAGCAGGCAGCTTGAGACAGGTGGAGCTGGATCAAGCTGTGAACGTGATTTGCTGGAAGCTGGTTGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474696.5
CDS CCA 72 bp AGAGAGTCTGATCCTGAAGACTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGACAGCAAGGCTGCGAG +
Preference number: 6 (lower is better)
Translates to: RESDPEDFHLLV*QKIPHRQQGCE
Trigger: CTCGCAGCCTTGCTGTCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAAGTCTTCAGGATCAGACTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000427542.5
ENST00000428373.5
ENST00000432682.5
ENST00000436702.5
ENST00000438071.1
ENST00000441454.5
ENST00000461826.1
ENST00000474696.5
CDS CCA 72 bp CTGCAATCTGATCCTGAAGACTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGACAGCAAGGCTGCGAG +
Preference number: 6 (lower is better)
Translates to: LQSDPEDFHLLV*QKIPHRQQGCE
Trigger: CTCGCAGCCTTGCTGTCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAAGTCTTCAGGATCAGATTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414496.5
CDS CAA 72 bp ATCGTCAACCAGCTTCCAGCAAATCACGTTCACAGCTaGATCCAGCTCCACCTGTCTCAAGCTGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: IVNQLPANHVHS*IQLHLSQAACF
Trigger: GAAGCAGGCAGCTTGAGACAGGTGGAGCTGGATCAAGCTGTGAACGTGATTTGCTGGAAGCTGGTTGACGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474696.5
CDS TCA 72 bp CTAATGACCAGCTTCCAGCAAATCACGTTCACAGCTTaGTCCAGCTCCACCTGTCTCAAGCTGCCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: LMTSFQQITFTA*SSSTCLKLPAS
Trigger: AGAAGCAGGCAGCTTGAGACAGGTGGAGCTGGATCAAGCTGTGAACGTGATTTGCTGGAAGCTGGTCATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000432682.5
CDS GCA 72 bp CAACTGGAGTCCCATGTCCCCATTAACAGTTCGGAATaGCCATCTCCATGCGATTCCCTTACACAGTGTGAC +
Preference number: 6 (lower is better)
Translates to: QLESHVPINSSE*PSPCDSLTQCD
Trigger: GTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATGGGACTCCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000187397.8
ENST00000396482.6
ENST00000412048.5
ENST00000413378.5
ENST00000414496.5
ENST00000417925.5
ENST00000419330.5
ENST00000421492.5
ENST00000427542.5
ENST00000428373.5
ENST00000432450.5
ENST00000432682.5
ENST00000438577.5
ENST00000444190.5
ENST00000449196.5
ENST00000450234.5
ENST00000452563.5
ENST00000474696.5
ENST00000684406.1
CDS CCA 72 bp TTATGCCCTTTGGTGCAGAATTCCTGCTGTAGGTCTTaGCGACTTACTAGCGGCTTCTGTCGTTCTACGCCA +
Preference number: 6 (lower is better)
Translates to: LCPLVQNSCCRS*RLTSGFCRSTP
Trigger: TGGCGTAGAACGACAGAAGCCGCTAGTAAGTCGCCAAGACCTACAGCAGGAATTCTGCACCAAAGGGCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000187397.8
ENST00000396482.6
ENST00000412048.5
ENST00000413378.5
ENST00000414496.5
ENST00000417925.5
ENST00000419330.5
ENST00000427542.5
ENST00000428373.5
ENST00000432450.5
ENST00000438577.5
ENST00000444190.5
ENST00000449196.5
ENST00000450234.5
ENST00000452563.5
ENST00000474696.5
ENST00000684406.1
CDS CCA 72 bp TTGATTCCTGATCCTGAAGACTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGACAGCAAGGCTGCGAG +
Preference number: 6 (lower is better)
Translates to: LIPDPEDFHLLV*QKIPHRQQGCE
Trigger: CTCGCAGCCTTGCTGTCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAAGTCTTCAGGATCAGGAATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000187397.8
ENST00000413378.5
ENST00000417925.5
ENST00000438577.5
ENST00000444190.5
ENST00000450234.5
ENST00000684406.1
CDS CCA 72 bp GATATACCTGATCCTGAAGACTTTCACCTCCTGGTCTaGCAGAAGATTCCTCACAGACAGCAAGGCTGCGAG +
Preference number: 6 (lower is better)
Translates to: DIPDPEDFHLLV*QKIPHRQQGCE
Trigger: CTCGCAGCCTTGCTGTCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAAGTCTTCAGGATCAGGTATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432450.5
ENST00000434383.6
ENST00000452563.5
CDS CAA 72 bp ACTAATGACCAGCTTCCAGCAAATCACGTTCACAGCTaGATCCAGCTCCACCTGTCTCAAGCTGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: TNDQLPANHVHS*IQLHLSQAACF
Trigger: GAAGCAGGCAGCTTGAGACAGGTGGAGCTGGATCAAGCTGTGAACGTGATTTGCTGGAAGCTGGTCATTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000412048.5
ENST00000432682.5
CDS CAA 90 bp CTCCTGTCAGTTGCTGGTGCGACAAGATCCTGTGGAAGGAAGTCTTaGGCAGGCAGCTCTAGTGAAGCTATCCCAACTAAATGCTACTTC +
Preference number: 6 (lower is better)
Translates to: LLSVAGATRSCGRKS*AGSSSEAIPTKCYF
Trigger: GAAGTAGCATTTAGTTGGGATAGCTTCACTAGAGCTGCCTGCCAAAGACTTCCTTCCACAGGATCTTGTCGCACCAGCAACTGACAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396481.6
ENST00000434383.6
CDS TCA 72 bp GGAATGCCCATCTCCATGCGATTCCCTTACACAGTGTaGCACATCGTCAACACTAATGACCAGCTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: GMPISMRFPYTV*HIVNTNDQLPA
Trigger: TGCTGGAAGCTGGTCATTAGTGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000432450.5
ENST00000432682.5
CDS TCA 72 bp GGAATGCCCATCTCCATGCGATTCCCTTACACAGTGTaGCACATCGTCAACCCTACATCTTCAGGAGGTGAT +
Preference number: 6 (lower is better)
Translates to: GMPISMRFPYTV*HIVNPTSSGGD
Trigger: ATCACCTCCTGAAGATGTAGGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444190.5
CDS TCA 72 bp GGAATGCCCATCTCCATGCGATTCCCTTACACAGTGTaGCACATCGTCAACCAGCTTCCAGCAAATCACGTT +
Preference number: 6 (lower is better)
Translates to: GMPISMRFPYTV*HIVNQLPANHV
Trigger: AACGTGATTTGCTGGAAGCTGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474696.5
CDS GCA 72 bp CATGTCCCCATTAACAGTTCGGAATGCCCATCTCCATaGGATTCCCTTACACAGTGTGACACATCGTCAACC +
Preference number: 6 (lower is better)
Translates to: HVPINSSECPSP*DSLTQCDTSST
Trigger: GGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000187397.8
ENST00000412048.5
ENST00000413378.5
ENST00000414496.5
ENST00000417925.5
ENST00000419330.5
ENST00000421492.5
ENST00000427542.5
ENST00000428373.5
ENST00000438577.5
ENST00000444190.5
ENST00000449196.5
ENST00000450234.5
ENST00000452563.5
ENST00000474696.5
ENST00000684406.1
CDS GCA 72 bp GAAGCCAAGGGAAAGGGTTCAAATCAAAGCAGAGCGTaGAGACTCCATGCGATCCACGTTAAGAATGGGAGA +
Preference number: 6 (lower is better)
Translates to: EAKGKGSNQSRA*RLHAIHVKNGR
Trigger: TCTCCCATTCTTAACGTGGATCGCATGGAGTCTGCACGCTCTGCTTTGATTTGAACCCTTTCCCTTGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481854.1
CDS CAA 72 bp GTTGCTGGTGCGACAAGATCCTGTGGAAGGAAGTCTTaGGCAGGCAGCTCTAGTGAAGCTATCCCAACTAAA +
Preference number: 6 (lower is better)
Translates to: VAGATRSCGRKS*AGSSSEAIPTK
Trigger: TTTAGTTGGGATAGCTTCACTAGAGCTGCCTGCCAAAGACTTCCTTCCACAGGATCTTGTCGCACCAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396481.6
ENST00000434383.6
ENST00000441454.5
CDS TCA 72 bp CTGCAGTTCCAGTTTCTCCTCTTCATCCAGACTTTCTaGTTTAACAATGCCGTTCTCTGGAGTGGCCGTCTC +
Preference number: 6 (lower is better)
Translates to: LQFQFLLFIQTF*FNNAVLWSGRL
Trigger: GAGACGGCCACTCCAGAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAAGAGGAGAAACTGGAACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000187397.8
ENST00000396481.6
ENST00000396482.6
ENST00000412048.5
ENST00000413378.5
ENST00000414496.5
ENST00000417925.5
ENST00000419330.5
ENST00000427542.5
ENST00000428373.5
ENST00000432450.5
ENST00000432682.5
ENST00000434383.6
ENST00000436702.5
ENST00000438071.1
ENST00000438577.5
ENST00000441454.5
ENST00000444190.5
ENST00000449196.5
ENST00000450234.5
ENST00000452563.5
ENST00000474696.5
ENST00000684406.1
CDS TCA 72 bp GGAATGCCCATCTCCATGCGATTCCCTTACACAGTGTaGCACATCGTCAACCTTGATCGAACTGTGGATATC +
Preference number: 6 (lower is better)
Translates to: GMPISMRFPYTV*HIVNLDRTVDI
Trigger: GATATCCACAGTTCGATCAAGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421492.5
ENST00000428373.5
ENST00000684406.1
CDS TCA 72 bp GGAATGCCCATCTCCATGCGATTCCCTTACACAGTGTaGCACATCGTCAACCATATCCAATGGTCAGCCTTT +
Preference number: 6 (lower is better)
Translates to: GMPISMRFPYTV*HIVNHIQWSAF
Trigger: AAAGGCTGACCATTGGATATGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438577.5
CDS GCA 72 bp CATGTCCCCATTAACAGTTCGGAATGCCCATCTCCATaGGATTCCCTTACACAGTGTGACACATCGTCAACA +
Preference number: 6 (lower is better)
Translates to: HVPINSSECPSP*DSLTQCDTSST
Trigger: TGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCCGAACTGTTAATGGGGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396482.6
ENST00000432450.5
ENST00000432682.5
CDS CCA 72 bp TTGCTGGTGCGACAAGATCCTGTGGAAGGAAGTCTTTaGCAGGCAGCTCTAGTGAAGCTATCCCAACTAAAT +
Preference number: 6 (lower is better)
Translates to: LLVRQDPVEGSL*QAALVKLSQLN
Trigger: ATTTAGTTGGGATAGCTTCACTAGAGCTGCCTGCCAAAGACTTCCTTCCACAGGATCTTGTCGCACCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396481.6
ENST00000434383.6
ENST00000441454.5
CDS CAA 90 bp GTTTCTAACACTAATGACCAGCTTCCAGCAAATCACGTTCACAGCTaGATCCAGCTCCACCTGTCTCAAGCTGCCTGCTTCTTCTCTAAT +
Preference number: 6 (lower is better)
Translates to: VSNTNDQLPANHVHS*IQLHLSQAACFFSN
Trigger: ATTAGAGAAGAAGCAGGCAGCTTGAGACAGGTGGAGCTGGATCAAGCTGTGAACGTGATTTGCTGGAAGCTGGTCATTAGTGTTAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412048.5
CDS TCA 72 bp GGAATGCCCATCTCCATGCGATTCCCTTACACAGTGTaGCACATCGTCAACCTTTCCAAATATCCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: GMPISMRFPYTV*HIVNLSKYPCP
Trigger: TGGACAAGGATATTTGGAAAGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000414496.5
ENST00000452563.5
CDS TCA 72 bp GGAATGCCCATCTCCATGCGATTCCCTTACACAGTGTaGCACATCGTCAACCTTGAAAACCCACATACACTT +
Preference number: 6 (lower is better)
Translates to: GMPISMRFPYTV*HIVNLENPHTL
Trigger: AAGTGTATGTGGGTTTTCAAGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449196.5
CDS CCA 72 bp TCCAAGAGCCTACTGTTTTCCACAAAAAGGCTTTCCTaGGAGCAAACTGAATTCTGGTGCTGCTGGTCTTGT +
Preference number: 6 (lower is better)
Translates to: SKSLLFSTKRLS*EQTEFWCCWSC
Trigger: ACAAGACCAGCAGCACCAGAATTCAGTTTGCTCCCAGGAAAGCCTTTTTGTGGAAAACAGTAGGCTCTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425289.5
CDS CAA 90 bp TCGTCAACCATATCCAATGGTCAGCCTTTACCTTTCCAAATATCCTaGTCCAGTATCCATAACCATGCACTGCTCTGTCTTCCCTCATGC +
Preference number: 6 (lower is better)
Translates to: SSTISNGQPLPFQIS*SSIHNHALLCLPSC
Trigger: GCATGAGGGAAGACAGAGCAGTGCATGGTTATGGATACTGGACAAGGATATTTGGAAAGGTAAAGGCTGACCATTGGATATGGTTGACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438577.5
CDS TCA 72 bp GGAATGCCCATCTCCATGCGATTCCCTTACACAGTGTaGCACATCGTCAACCATAAGAAGAAATGGCTTTCA +
Preference number: 6 (lower is better)
Translates to: GMPISMRFPYTV*HIVNHKKKWLS
Trigger: TGAAAGCCATTTCTTCTTATGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419330.5
CDS GCA 72 bp TTGGCAGGCAGCTCTAGTGAAGCTATCCCAACTAAATaGTACTTCTCCAGGCTCACAATAGTCTATAGACAC +
Preference number: 6 (lower is better)
Translates to: LAGSSSEAIPTK*YFSRLTIVYRH
Trigger: GTGTCTATAGACTATTGTGAGCCTGGAGAAGTAGCATTTAGTTGGGATAGCTTCACTAGAGCTGCCTGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396481.6
ENST00000434383.6
CDS TCA 72 bp TCTTCAGGAGGTGATCAGGTAGCAAACCTGAATAGCTaGCAGCAACCACATCCACCTCAGCTATATTTCTAT +
Preference number: 6 (lower is better)
Translates to: SSGGDQVANLNS*QQPHPPQLYFY
Trigger: ATAGAAATATAGCTGAGGTGGATGTGGTTGCTGTCAGCTATTCAGGTTTGCTACCTGATCACCTCCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444190.5
CDS GCA 72 bp AATAACAAGATTTTATGCCCTTTGGTGCAGAATTCCTaGTGTAGGTCTTGGCGACTTACTAGCGGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: NNKILCPLVQNS*CRSWRLTSGFC
Trigger: ACAGAAGCCGCTAGTAAGTCGCCAAGACCTACAGCAGGAATTCTGCACCAAAGGGCATAAAATCTTGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000187397.8
ENST00000396482.6
ENST00000412048.5
ENST00000413378.5
ENST00000414496.5
ENST00000417925.5
ENST00000419330.5
ENST00000427542.5
ENST00000428373.5
ENST00000432450.5
ENST00000438577.5
ENST00000444190.5
ENST00000449196.5
ENST00000450234.5
ENST00000452563.5
ENST00000474696.5
ENST00000684406.1
CDS GCA 72 bp TCCACACCCCCTTTACACACACTTGTGAATACACCTTaGCATCAAAATGGGTCGACAAATCTTAGAGACACA +
Preference number: 6 (lower is better)
Translates to: STPPLHTLVNTP*HQNGSTNLRDT
Trigger: TGTGTCTCTAAGATTTGTCGACCCATTTTGATGGCAAGGTGTATTCACAAGTGTGTGTAAAGGGGGTGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434383.6
ENST00000441454.5
CDS CAA 72 bp CACAGTGTGACACATCGTCAACCTTTCCAAATATCCTaGTCCAGTATCCATAACCATGCACTGCTCTGTCTT +
Preference number: 6 (lower is better)
Translates to: HSVTHRQPFQIS*SSIHNHALLCL
Trigger: AAGACAGAGCAGTGCATGGTTATGGATACTGGACAAGGATATTTGGAAAGGTTGACGATGTGTCACACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187397.8
ENST00000414496.5
ENST00000452563.5
CDS TCA 72 bp GGAATGCCCATCTCCATGCGATTCCCTTACACAGTGTaGCACATCGTCAACCTATCTATGAAAACACTAAAT +
Preference number: 6 (lower is better)
Translates to: GMPISMRFPYTV*HIVNLSMKTLN
Trigger: ATTTAGTGTTTTCATAGATAGGTTGACGATGTGTCACACTGTGTAAGGGAATCGCATGGAGATGGGCATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427542.5
CDS GCA 72 bp TCCAAATATCCTTGTCCAGTATCCATAACCATGCACTaGTCTGTCTTCCCTCATGCTTCTTTTATTGCTGAG +
Preference number: 6 (lower is better)
Translates to: SKYPCPVSITMH*SVFPHASFIAE
Trigger: CTCAGCAATAAAAGAAGCATGAGGGAAGACAGAGCAGTGCATGGTTATGGATACTGGACAAGGATATTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187397.8
ENST00000452563.5
CDS CAA 72 bp TTCTTTACAGCTACACCGGTTGATCATCGGTCCGTATaGATAATCCAGCTCAATTTGTGCACAACTGAAGGA +
Preference number: 6 (lower is better)
Translates to: FFTATPVDHRSV*IIQLNLCTTEG
Trigger: TCCTTCAGTTGTGCACAAATTGAGCTGGATTATCAATACGGACCGATGATCAACCGGTGTAGCTGTAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446068.6
CDS CAA 72 bp TGTCACTGTTGCATGGCTACAGGATGTAACCTAGCCTaGGCCAATTATCTTGAAATAAGTACTATGGCCACA +
Preference number: 6 (lower is better)
Translates to: CHCCMATGCNLA*ANYLEISTMAT
Trigger: TGTGGCCATAGTACTTATTTCAAGATAATTGGCCAAGGCTAGGTTACATCCTGTAGCCATGCAACAGTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462173.1
CDS GCA 72 bp AAACTCCCAGAAACCTTCAGTCCTCAGTTTAGGAACTaGTGCTTAGTTTTCTCACTCATCTTTGAAATGGGA +
Preference number: 6 (lower is better)
Translates to: KLPETFSPQFRN*CLVFSLIFEMG
Trigger: TCCCATTTCAAAGATGAGTGAGAAAACTAAGCAGCAGTTCCTAAACTGAGGACTGAAGGTTTCTGGGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463970.5
CDS CAA 72 bp ACAAATGACCCTCGACTTCTGACTCAAGATGTGGCATaGATGTTCTGCAGCATCTCTAAGATGACTGAAAAA +
Preference number: 6 (lower is better)
Translates to: TNDPRLLTQDVA*MFCSISKMTEK
Trigger: TTTTTCAGTCATCTTAGAGATGCTGCAGAACATCAATGCCACATCTTGAGTCAGAAGTCGAGGGTCATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434383.6
ENST00000441454.5
CDS CAA 72 bp ATATCCAATGGTCAGCCTTTACCTTTCCAAATATCCTaGTCCAGTATCCATAACCATGCACTGCTCTGTCTT +
Preference number: 6 (lower is better)
Translates to: ISNGQPLPFQIS*SSIHNHALLCL
Trigger: AAGACAGAGCAGTGCATGGTTATGGATACTGGACAAGGATATTTGGAAAGGTAAAGGCTGACCATTGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438577.5
CDS CAA 90 bp TCAAATTACTGTCACTGTTGCATGGCTACAGGATGTAACCTAGCCTaGGCCAATTATCTTGAAATAAGTACTATGGCCACAGATTCAGTC +
Preference number: 6 (lower is better)
Translates to: SNYCHCCMATGCNLA*ANYLEISTMATDSV
Trigger: GACTGAATCTGTGGCCATAGTACTTATTTCAAGATAATTGGCCAAGGCTAGGTTACATCCTGTAGCCATGCAACAGTGACAGTAATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462173.1
CDS TCA 72 bp CAACAAAAGAGGATATTTCTCCAACTTTTGAACAAATaGCCCTCGACTTCTGACTCAAGATGTGGCATTGAT +
Preference number: 6 (lower is better)
Translates to: QQKRIFLQLLNK*PSTSDSRCGID
Trigger: ATCAATGCCACATCTTGAGTCAGAAGTCGAGGGTCATTTGTTCAAAAGTTGGAGAAATATCCTCTTTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434383.6
ENST00000441454.5
CDS TCA 72 bp ATTATGAAGTCAAAAGTCATGGGGTCAGCATTATTGTaGTCAAATTACTGTCACTGTTGCATGGCTACAGGA +
Preference number: 6 (lower is better)
Translates to: IMKSKVMGSALL*SNYCHCCMATG
Trigger: TCCTGTAGCCATGCAACAGTGACAGTAATTTGATCACAATAATGCTGACCCCATGACTTTTGACTTCATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462173.1
CDS CCA 72 bp AATACAAATGTGCTTATCTTTTCAGCTGGCTGGAACTaGAGGCTATGGTCAACACTTAAATCAGATTTTATA +
Preference number: 6 (lower is better)
Translates to: NTNVLIFSAGWN*RLWSTLKSDFI
Trigger: TATAAAATCTGATTTAAGTGTTGACCATAGCCTCCAGTTCCAGCCAGCTGAAAAGATAAGCACATTTGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473138.1