Pregenerated sensors for ARPP19 (Homo sapiens)
Ensembl gene IDs: ENSG00000128989Ensembl transcript IDs: ENST00000249822.9, ENST00000561650.5, ENST00000561971.1, ENST00000564163.5, ENST00000566423.5, ENST00000568196.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGGCACTAGAGCTCAGGTaGCAGAGCAAGGCCCTATCC | + |
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Preference number: 2 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLALELR*QSKALS Trigger: GGATAGGGCCTTGCTCTGTCACCTGAGCTCTAGTGC...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| 3UTR-3UTR TCA 90 bp | TTCACTTTCTGTAGTTTGTTACCTGAGGCAACCTTGGTCCAAAAATATTATGTGGCACTAGAGCTCAGGTaGCAGAGCAAGGCCCTATCC | + |
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Preference number: 2 (lower is better) Translates to: FTFCSLLPEATLVQKYYVALELR*QSKALS Trigger: GGATAGGGCCTTGCTCTGTCACCTGAGCTCTAGTGC...CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| 3UTR-3UTR TCA 90 bp | TTCACTTTCTGTAGTTTGTTACCTGAGGCAACCTTGGTCCAAAAATATTATGTGGTCCTGCCTGGGATGTaGATCACCCCTTTGTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: FTFCSLLPEATLVQKYYVVLPGM*ITPLSC Trigger: GCAGGACAAAGGGGTGATTCACATCCCAGGCAGGAC...CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| 3UTR-3UTR TCA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGGGTTGCAGTGAGCTGTaGTTGCACTACTGCACTAGA | + |
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Preference number: 2 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLGCSEL*LHYCTR Trigger: TCTAGTGCAGTAGTGCAATCACAGCTCACTGCAACC...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| 3UTR-3UTR CCA 90 bp | TTCACTTTCTGTAGTTTGTTACCTGAGGCAACCTTGGTCCAAAAATATTATGTGCTGCTCTGTCCTGCCTaGGATGTGAATCACCCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FTFCSLLPEATLVQKYYVLLCPA*DVNHPF Trigger: AAAGGGGTGATTCACATCCCAGGCAGGACAGAGCAG...CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| 3UTR-3UTR TCA 90 bp | TTCACTTTCTGTAGTTTGTTACCTGAGGCAACCTTGGTCCAAAAATATTATGTGAATCACAAGCCATCCTaGGTGATGAAATCTCATGAT | + |
|
Preference number: 2 (lower is better) Translates to: FTFCSLLPEATLVQKYYVNHKPS*VMKSHD Trigger: ATCATGAGATTTCATCACTCAGGATGGCTTGTGATT...CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| 3UTR CCA 72 bp | GTGATGAAATCTCATGATCTCCTGCTCTGTCCTGCCTaGGATGTGAATCACCCCTTTGTCCTGCTTATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VMKSHDLLLCPA*DVNHPFVLLIH Trigger: GTGGATAAGCAGGACAAAGGGGTGATTCACATCCCAGGCAGGACAGAGCAGGAGATCATGAGATTTCATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| 3UTR TCA 72 bp | AATCTCATGATCTCCTGCTCTGTCCTGCCTGGGATGTaGATCACCCCTTTGTCCTGCTTATCCACACTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: NLMISCSVLPGM*ITPLSCLSTLY Trigger: ATACAGTGTGGATAAGCAGGACAAAGGGGTGATTCACATCCCAGGCAGGACAGAGCAGGAGATCATGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS-3UTR CCA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGGATGCAATTAGCGGGTaGCCGAGGCCACCCGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLDAISG*PRPPGR Trigger: GCGGCCGGGTGGCCTCGGCCACCCGCTAATTGCATC...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249822.9 |
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| CDS-3UTR TCA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGAGGGACGGCTTCCGTTaGGGAAGGTCTTGCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLRDGFR*GRSCGV Trigger: CACTCCGCAAGACCTTCCTCAACGGAAGCCGTCCCT...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS-3UTR CCA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGCCTCACATCCGTTTGTaGCTGCCGAGTGCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLPHIRL*LPSASW Trigger: CCAGGAAGCACTCGGCAGCCACAAACGGATGTGAGG...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566423.5 |
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| CDS-3UTR GCA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGAAAGGTCGCCGCTCCTaGCTCACCTCACATCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLKGRRS*LTSHPF Trigger: AAACGGATGTGAGGTGAGGCAGGAGCGGCGACCTTT...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566423.5 |
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| CDS-3UTR CCA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGCTGCTCTGTCCTGCCTaGGATGTGAATCACCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLLLCPA*DVNHPF Trigger: AAAGGGGTGATTCACATCCCAGGCAGGACAGAGCAG...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS-3UTR GCA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGAATCTCATGATCTCCTaGTCTGTCCTGCCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLNLMIS*SVLPGM Trigger: CATCCCAGGCAGGACAGAGCAGGAGATCATGAGATT...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS-3UTR GCA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGTTTGTGGCTGCCGAGTaGTTCCTGGGAATTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLFVAAE*FLGIVV Trigger: AACTACAATTCCCAGGAAGCACTCGGCAGCCACAAA...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566423.5 |
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| CDS-3UTR TCA 90 bp | TTCACTTTCTGTAGTTTGTTACCTGAGGCAACCTTGGTCCAAAAATATTATGTGGGTTGCAGTGAGCTGTaGTTGCACTACTGCACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTFCSLLPEATLVQKYYVGCSEL*LHYCTR Trigger: TCTAGTGCAGTAGTGCAATCACAGCTCACTGCAACC...CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS-3UTR GCA 90 bp | TTCACTTTCTGTAGTTTGTTACCTGAGGCAACCTTGGTCCAAAAATATTATGTGAATCTCATGATCTCCTaGTCTGTCCTGCCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FTFCSLLPEATLVQKYYVNLMIS*SVLPGM Trigger: CATCCCAGGCAGGACAGAGCAGGAGATCATGAGATT...CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS-3UTR TCA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGAATCACAAGCCATCCTaGGTGATGAAATCTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLNHKPS*VMKSHD Trigger: ATCATGAGATTTCATCACTCAGGATGGCTTGTGATT...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS-3UTR CCA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGTACCTGAGGCAACCTTaGTCCAAAAATATTATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLYLRQP*SKNIMW Trigger: CCACATAATATTTTTGGACCAAGGTTGCCTCAGGTA...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS-3UTR GCA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGGTAATCCCCTTTATCTaGAATTTCACTTTCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLVIPFI*NFTFCS Trigger: ACTACAGAAAGTGAAATTGCAGATAAAGGGGATTAC...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS-3UTR CCA 90 bp | TTCACTTTCTGTAGTTTGTTACCTGAGGCAACCTTGGTCCAAAAATATTATGTGTACCTGAGGCAACCTTaGTCCAAAAATATTATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTFCSLLPEATLVQKYYVYLRQP*SKNIMW Trigger: CCACATAATATTTTTGGACCAAGGTTGCCTCAGGTA...CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS-3UTR GCA 90 bp | TTCACTTTCTGTAGTTTGTTACCTGAGGCAACCTTGGTCCAAAAATATTATGTGGTAATCCCCTTTATCTaGAATTTCACTTTCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTFCSLLPEATLVQKYYVVIPFI*NFTFCS Trigger: ACTACAGAAAGTGAAATTGCAGATAAAGGGGATTAC...CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS GCA 90 bp | GCGACGGCGGGAAGCCAAAGGTGGGGCGCAGGAGCCTCGGCCTCATaGGCCTCGGCCCCGCATCTCGGGCGCGGCCCTCCGCCTGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: ATAGSQRWGAGASAS*ASAPHLGRGPPPGG Trigger: CCCGCCAGGCGGAGGGCCGCGCCCGAGATGCGGGGCCGAGGCGCATGAGGCCGAGGCTCCTGCGCCCCACCTTTGGCTTCCCGCCGTCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561650.5 |
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| CDS CCA 90 bp | GGAGGTGTTACAAAAGGCACGATTCGGAGTAAACGCGGGGCACGTTaGAACTCCCAATTCGTCGGCGCACCAGCCAGCGACGGCGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GGVTKGTIRSKRGAR*NSQFVGAPASDGGK Trigger: CTTCCCGCCGTCGCTGGCTGGTGCGCCGACGAATTGGGAGTTCCAACGTGCCCCGCGTTTACTCCGAATCGTGCCTTTTGTAACACCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561650.5 |
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| CDS GCA 90 bp | CTTCAAAGGTCGCCGCTCCTGCCTCACCTCACATCCGTTTGTGGCTaGCGAGTGCTTCCGAAACTGCTAGCATTGAGCTCCCCCAATGAC | + |
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Preference number: 5 (lower is better) Translates to: LQRSPLLPHLTSVCG*RVLPKLLALSSPND Trigger: GTCATTGGGGGAGCTCAATGCTAGCAGTTTCGGAAGCACTCGGCAGCCACAAACGGATGTGAGGTGAGGCAGGAGCGGCGACCTTTGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561971.1 |
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| CDS TCA 90 bp | CTCTACGCCCAAAGCCTGCGTCCTGGGCTCTCGCGTAAATATAAGTaGCTGAGGAACACCGCGACCCACGGAGGTGTTACAAAAGGCACG | + |
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Preference number: 5 (lower is better) Translates to: LYAQSLRPGLSRKYK*LRNTATHGGVTKGT Trigger: CGTGCCTTTTGTAACACCTCCGTGGGTCGCGGTGTTCCTCAGTCACTTATATTTACGCGAGAGCCCAGGACGCAGGCTTTGGGCGTAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561650.5 |
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| CDS CCA 90 bp | TTTCCTTCAAAGGTCGCCGCTCCTGCCTCACCTCACATCCGTTTGTaGCTGCCGAGTGCTTCCGAAACTGCTAGCATTGAGCTCCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: FPSKVAAPASPHIRL*LPSASETASIELPQ Trigger: TTGGGGGAGCTCAATGCTAGCAGTTTCGGAAGCACTCGGCAGCCACAAACGGATGTGAGGTGAGGCAGGAGCGGCGACCTTTGAAGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561971.1 |
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| CDS TCA 90 bp | ACGCCCAAAGCCTGCGTCCTGGGCTCTCGCGTAAATATAAGTGACTaGGGAACACCGCGACCCACGGAGGTGTTACAAAAGGCACGATTC | + |
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Preference number: 5 (lower is better) Translates to: TPKACVLGSRVNISD*GTPRPTEVLQKARF Trigger: GAATCGTGCCTTTTGTAACACCTCCGTGGGTCGCGGTGTTCCTCAGTCACTTATATTTACGCGAGAGCCCAGGACGCAGGCTTTGGGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561650.5 |
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| CDS GCA 90 bp | GTCACTTTATCTTCCATTTCCTCTAGGCTGTTAGGAATCGATGGTTaGAGAGACCAAGGGAGCATGTTGTGTTCACTCTTCTGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: VTLSSISSRLLGIDG*RDQGSMLCSLFCSS Trigger: GGAGGAGCAGAAGAGTGAACACAACATGCTCCCTTGGTCTCTGCAACCATCGATTCCTAACAGCCTAGAGGAAATGGAAGATAAAGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561971.1 ENST00000564163.5 |
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| CDS-3UTR CAA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGTCACCTCACATCCGTTaGTGGCTGCCGAGTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLSPHIR*WLPSAS Trigger: GGAAGCACTCGGCAGCCACAAACGGATGTGAGGTGA...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566423.5 |
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| CDS-3UTR CAA 90 bp | TTCACTTTCTGTAGTTTGTTACCTGAGGCAACCTTGGTCCAAAAATATTATGTGGACATAGTGCTCCCTTaGACCCCGCTTCTCCCGCTC | + |
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Preference number: 5 (lower is better) Translates to: FTFCSLLPEATLVQKYYVDIVLP*TPLLPL Trigger: GAGCGGGAGAAGCGGGGTCAAAGGGAGCACTATGTC...CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566423.5 |
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| CDS-3UTR CAA 90 bp | TTCACTTTCTGTAGTTTGTTACCTGAGGCAACCTTGGTCCAAAAATATTATGTGAAGGGACGGCTTCCGTaGAGGAAGGTCTTGCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: FTFCSLLPEATLVQKYYVKGRLP*RKVLRS Trigger: ACTCCGCAAGACCTTCCTCAACGGAAGCCGTCCCTT...CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS GCA 90 bp | CTTCCGAAACTGCTAGCATTGAGCTCCCCCAATGACCTTTTTATTTaGCAAGTCCTGCGGCTTCTTACTGAATCCTCATTCTACTTGATA | + |
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Preference number: 5 (lower is better) Translates to: LPKLLALSSPNDLFI*QVLRLLTESSFYLI Trigger: TATCAAGTAGAATGAGGATTCAGTAAGAAGCCGCAGGACTTGGCAAATAAAAAGGTCATTGGGGGAGCTCAATGCTAGCAGTTTCGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000561971.1 |
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| CDS-3UTR CAA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGTTCACTTTCTGTAGTTaGTTACCTGAGGCAACCTTG | + |
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Preference number: 5 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLFTFCS*LPEATL Trigger: CAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS-3UTR CAA 90 bp | CTAATTCCAACTGTTGAAGTAGTAACAAGTAAAGGCTTCACCAGGCTTTCCTTGTTACCTGAGGCAACCTaGGTCCAAAAATATTATGTG | + |
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Preference number: 5 (lower is better) Translates to: LIPTVEVVTSKGFTRLSLLPEAT*VQKYYV Trigger: CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAA...CAAGGAAAGCCTGGTGAAGCCTTTACTTGTTACTACTTCAACAGTTGGAATTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS TCA 90 bp | TTATTTGCCAAGTCCTGCGGCTTCTTACTGAATCCTCATTCTACTTaGTATCTGAATAGTTACTCGCAATGTTTGTTGGTTCCAACAAAG | + |
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Preference number: 5 (lower is better) Translates to: LFAKSCGFLLNPHST*YLNSYSQCLLVPTK Trigger: CTTTGTTGGAACCAACAAACATTGCGAGTAACTATTCAGATATCAAGTAGAATGAGGATTCAGTAAGAAGCCGCAGGACTTGGCAAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561971.1 |
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| CDS-3UTR CAA 90 bp | TTCACTTTCTGTAGTTTGTTACCTGAGGCAACCTTGGTCCAAAAATATTATGTGTTCACTTTCTGTAGTTaGTTACCTGAGGCAACCTTG | + |
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Preference number: 5 (lower is better) Translates to: FTFCSLLPEATLVQKYYVFTFCS*LPEATL Trigger: CAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA...CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS-3UTR CAA 90 bp | TTCACTTTCTGTAGTTTGTTACCTGAGGCAACCTTGGTCCAAAAATATTATGTGTTACCTGAGGCAACCTaGGTCCAAAAATATTATGTG | + |
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Preference number: 5 (lower is better) Translates to: FTFCSLLPEATLVQKYYVLPEAT*VQKYYV Trigger: CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAA...CACATAATATTTTTGGACCAAGGTTGCCTCAGGTAACAAACTACAGAAAGTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000566423.5 |
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| CDS GCA 72 bp | GGAAGCCAAAGGTGGGGCGCAGGAGCCTCGGCCTCATaGGCCTCGGCCCCGCATCTCGGGCGCGGCCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: GSQRWGAGASAS*ASAPHLGRGPP Trigger: CGGAGGGCCGCGCCCGAGATGCGGGGCCGAGGCGCATGAGGCCGAGGCTCCTGCGCCCCACCTTTGGCTTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561650.5 |
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| CDS CCA 72 bp | GCAGACGAGACGCCGGGAAAAGATGCAATTAGCGGGTaGCCGAGGCCACCCGGCCGCCGCCCGTCCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: ADETPGKDAISG*PRPPGRRPSQL Trigger: GAGCTGGGACGGGCGGCGGCCGGGTGGCCTCGGCCACCCGCTAATTGCATCTTTTCCCGGCGTCTCGTCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000249822.9 ENST00000564163.5 |
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| CDS CCA 72 bp | CCATGGTTACAAGGGTTGGCCCTGAAATGCCAATCCTaGCCCACATCGCGGCCCGCACACGAGGCACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PWLQGLALKCQS*PTSRPAHEALL Trigger: AAGCAGTGCCTCGTGTGCGGGCCGCGATGTGGGCCAGGATTGGCATTTCAGGGCCAACCCTTGTAACCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561650.5 |
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| CDS GCA 72 bp | TCGCCGCTCCTGCCTCACCTCACATCCGTTTGTGGCTaGCGAGTGCTTCCGAAACTGCTAGCATTGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPLLPHLTSVCG*RVLPKLLALSS Trigger: GGAGCTCAATGCTAGCAGTTTCGGAAGCACTCGGCAGCCACAAACGGATGTGAGGTGAGGCAGGAGCGGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561971.1 |
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| CDS CCA 72 bp | ACAAAAGGCACGATTCGGAGTAAACGCGGGGCACGTTaGAACTCCCAATTCGTCGGCGCACCAGCCAGCGAC | + |
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Preference number: 6 (lower is better) Translates to: TKGTIRSKRGAR*NSQFVGAPASD Trigger: GTCGCTGGCTGGTGCGCCGACGAATTGGGAGTTCCAACGTGCCCCGCGTTTACTCCGAATCGTGCCTTTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561650.5 |
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| CDS CCA 72 bp | GGCCCACATCGCGGCCCGCACACGAGGCACTGCTTTTaGAGTGAACCGCACGCTCACAATACAAGTAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GPHRGPHTRHCF*SEPHAHNTSSW Trigger: CCAACTACTTGTATTGTGAGCGTGCGGTTCACTCCAAAAGCAGTGCCTCGTGTGCGGGCCGCGATGTGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561650.5 |
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| CDS CCA 72 bp | AAGGTCGCCGCTCCTGCCTCACCTCACATCCGTTTGTaGCTGCCGAGTGCTTCCGAAACTGCTAGCATTGAG | + |
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Preference number: 6 (lower is better) Translates to: KVAAPASPHIRL*LPSASETASIE Trigger: CTCAATGCTAGCAGTTTCGGAAGCACTCGGCAGCCACAAACGGATGTGAGGTGAGGCAGGAGCGGCGACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561971.1 |
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| CDS TCA 72 bp | ACTTTACTCACTGACCATGGTTACAAGGGTTGGCCCTaGAATGCCAATCCTGGCCCACATCGCGGCCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: TLLTDHGYKGWP*NANPGPHRGPH Trigger: GTGCGGGCCGCGATGTGGGCCAGGATTGGCATTTCAGGGCCAACCCTTGTAACCATGGTCAGTGAGTAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561650.5 |
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| CDS CAA 72 bp | TCAAAGGTCGCCGCTCCTGCCTCACCTCACATCCGTTaGTGGCTGCCGAGTGCTTCCGAAACTGCTAGCATT | + |
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Preference number: 6 (lower is better) Translates to: SKVAAPASPHIR*WLPSASETASI Trigger: AATGCTAGCAGTTTCGGAAGCACTCGGCAGCCACAAACGGATGTGAGGTGAGGCAGGAGCGGCGACCTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561971.1 |
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| CDS TCA 72 bp | GCCTGCGTCCTGGGCTCTCGCGTAAATATAAGTGACTaGGGAACACCGCGACCCACGGAGGTGTTACAAAAG | + |
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Preference number: 6 (lower is better) Translates to: ACVLGSRVNISD*GTPRPTEVLQK Trigger: CTTTTGTAACACCTCCGTGGGTCGCGGTGTTCCTCAGTCACTTATATTTACGCGAGAGCCCAGGACGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561650.5 |
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| CDS TCA 72 bp | CAAAGCCTGCGTCCTGGGCTCTCGCGTAAATATAAGTaGCTGAGGAACACCGCGACCCACGGAGGTGTTACA | + |
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Preference number: 6 (lower is better) Translates to: QSLRPGLSRKYK*LRNTATHGGVT Trigger: TGTAACACCTCCGTGGGTCGCGGTGTTCCTCAGTCACTTATATTTACGCGAGAGCCCAGGACGCAGGCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561650.5 |
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| CDS CAA 90 bp | CTCACATCCGTTTGTGGCTGCCGAGTGCTTCCGAAACTGCTAGCATaGAGCTCCCCCAATGACCTTTTTATTTGCCAAGTCCTGCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LTSVCGCRVLPKLLA*SSPNDLFICQVLRL Trigger: AAGCCGCAGGACTTGGCAAATAAAAAGGTCATTGGGGGAGCTCAATGCTAGCAGTTTCGGAAGCACTCGGCAGCCACAAACGGATGTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000561971.1 |
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| CDS CAA 72 bp | GTTTGTGGCTGCCGAGTGCTTCCGAAACTGCTAGCATaGAGCTCCCCCAATGACCTTTTTATTTGCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VCGCRVLPKLLA*SSPNDLFICQV Trigger: GACTTGGCAAATAAAAAGGTCATTGGGGGAGCTCAATGCTAGCAGTTTCGGAAGCACTCGGCAGCCACAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000561971.1 |
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| CDS GCA 72 bp | TCTTCCATTTCCTCTAGGCTGTTAGGAATCGATGGTTaGAGAGACCAAGGGAGCATGTTGTGTTCACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSISSRLLGIDG*RDQGSMLCSLF Trigger: GAAGAGTGAACACAACATGCTCCCTTGGTCTCTGCAACCATCGATTCCTAACAGCCTAGAGGAAATGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561971.1 ENST00000564163.5 |
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| CDS TCA 72 bp | AAGTCCTGCGGCTTCTTACTGAATCCTCATTCTACTTaGTATCTGAATAGTTACTCGCAATGTTTGTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: KSCGFLLNPHST*YLNSYSQCLLV Trigger: AACCAACAAACATTGCGAGTAACTATTCAGATATCAAGTAGAATGAGGATTCAGTAAGAAGCCGCAGGACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561971.1 |
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| CDS TCA 72 bp | CACACACTGGATAAAAATATCAAGATAGCTCAGCTCTaGAGTCTTGCTTGCCATTACTTTTCCAGTCATGTA | + |
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Preference number: 6 (lower is better) Translates to: HTLDKNIKIAQL*SLACHYFSSHV Trigger: TACATGACTGGAAAAGTAATGGCAAGCAAGACTTCAGAGCTGAGCTATCTTGATATTTTTATCCAGTGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568196.1 |
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