RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARPIN (Homo sapiens)

Ensembl gene IDs: ENSG00000242498

Ensembl transcript IDs: ENST00000357484.10, ENST00000460685.1, ENST00000560096.1

Found 373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTaGCCTCTCTGGGAATGGCATCTACCAGGAAAGCAGCCAGGGATG +
Preference number: 1 (lower is better)
Translates to: ESERCGPASHAWERC*PLWEWHLPGKQPGM
Trigger: CATCCCTGGCTGCTTTCCTGGTAGATGCCATTCCCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR GCA 90 bp GCCACTGCTATAGACCAGACCCCTCTAGCCTCTCACCCAGGCAACTaGAGCAGTCTCCTAAAGGAGCAACTCGCCTCCAGCTGCTCGGCA +
Preference number: 1 (lower is better)
Translates to: ATAIDQTPLASHPGN*SSLLKEQLASSCSA
Trigger: TGCCGAGCAGCTGGAGGCGAGTTGCTCCTTTAGGAGACTGCTGCAGTTGCCTGGGTGAGAGGCTAGAGGGGTCTGGTCTATAGCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 90 bp AGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTaGGAATGGCATCTACCAGGAAAGCAGCCAGGGATGTCAGATAAC +
Preference number: 1 (lower is better)
Translates to: RCGPASHAWERCWPL*EWHLPGKQPGMSDN
Trigger: GTTATCTGACATCCCTGGCTGCTTTCCTGGTAGATGCCATTCCCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR GCA 90 bp GGCAGAGTCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTaGCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTG +
Preference number: 1 (lower is better)
Translates to: GRVRVFDLYRTLEPH*PDSKHGSADCLGTL
Trigger: CAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGACTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 90 bp GGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTGGGAATaGCATCTACCAGGAAAGCAGCCAGGGATGTCAGATAACAGAAAC +
Preference number: 1 (lower is better)
Translates to: GPASHAWERCWPLWE*HLPGKQPGMSDNRN
Trigger: GTTTCTGTTATCTGACATCCCTGGCTGCTTTCCTGGTAGATGCCATTCCCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR CCA 90 bp TGCAAGTGGGGGAGTGACCTGCTCTGGGAACAGCCAGCCCCTCCATaGGACCAACACAGCCCTTCCCAAACTGTTTCTCACAACAGCTGT +
Preference number: 1 (lower is better)
Translates to: CKWGSDLLWEQPAPP*DQHSPSQTVSHNSC
Trigger: ACAGCTGTTGTGAGAAACAGTTTGGGAAGGGCTGTGTTGGTCCCATGGAGGGGCTGGCTGTTCCCAGAGCAGGTCACTCCCCCACTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR GCA 90 bp AAAGGTATTCTCAAAACTGTAGCCTGGCAGAGTGAGTCTGAGAGATaGGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTGG +
Preference number: 1 (lower is better)
Translates to: KGILKTVAWQSESER*GPASHAWERCWPLW
Trigger: CCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTCACTCTGCCAGGCTACAGTTTTGAGAATACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR TCA 90 bp CATGCCCAATCTCCAGCCTCATCTCAAACACCAGCCCCCATTCTCTaGGCTCCAGACACAATGGTCTTTCCCTTCCTGAAGCCCATCCAA +
Preference number: 1 (lower is better)
Translates to: HAQSPASSQTPAPIL*APDTMVFPFLKPIQ
Trigger: TTGGATGGGCTTCAGGAAGGGAAAGACCATTGTGTCTGGAGCTCAGAGAATGGGGGCTGGTGTTTGAGATGAGGCTGGAGATTGGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 90 bp AGAAACCCCAGAGGTGGCATGGGAACATTTGAGGGAGTAAAGAACTaGCAACTCAAGGTAGGGGGAAGGTACAAGGGACACGGAGGCTTG +
Preference number: 1 (lower is better)
Translates to: RNPRGGMGTFEGVKN*QLKVGGRYKGHGGL
Trigger: CAAGCCTCCGTGTCCCTTGTACCTTCCCCCTACCTTGAGTTGCCAGTTCTTTACTCCCTCAAATGTTCCCATGCCACCTCTGGGGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR CCA 90 bp TCTGATGGAATGGCAGAGTCAGGGTGTTTGATCTGTACAGGACCCTaGAACCACACTGCCCTGATTCAAAGCATGGTTCTGCGGACTGCC +
Preference number: 1 (lower is better)
Translates to: SDGMAESGCLICTGP*NHTALIQSMVLRTA
Trigger: GGCAGTCCGCAGAACCATGCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGACTCTGCCATTCCATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 90 bp TGGAACCACACTGCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTaGGCACCCTGGGCAAGTTTCCCCATCTGTAGAAAAGGTGTAATA +
Preference number: 1 (lower is better)
Translates to: WNHTALIQSMVLRTA*APWASFPICRKGVI
Trigger: TATTACACCTTTTCTACAGATGGGGAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGCAGTGTGGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 90 bp TTTGGACACAGTGCTTTAGACAGCAGGATGTCTAAAGACACTGGGTaGCTCTACCCCCAGTCAGTGTCCCCAGCTATCCTTCTGCTCAAC +
Preference number: 1 (lower is better)
Translates to: FGHSALDSRMSKDTG*LYPQSVSPAILLLN
Trigger: GTTGAGCAGAAGGATAGCTGGGGACACTGACTGGGGGTAGAGTCACCCAGTGTCTTTAGACATCCTGCTGTCTAAAGCACTGTGTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 90 bp TTTCTAGCCCTATTAACAACCTGTGGAAGATCCCTCAGGCTGGTCTaGAAGAATCGCCCCAGAGCTCTTAAGGAGGAAGCGAGCCGAGAA +
Preference number: 1 (lower is better)
Translates to: FLALLTTCGRSLRLV*KNRPRALKEEASRE
Trigger: TTCTCGGCTCGCTTCCTCCTTAAGAGCTCTGGGGCGATTCTTTCAGACCAGCCTGAGGGATCTTCCACAGGTTGTTAATAGGGCTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR GCA 90 bp GGAAACAATGAGAACGGAGGAAGAGCCCCGCTAACTTCTCTCAGCTaGTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATAC +
Preference number: 1 (lower is better)
Translates to: GNNENGGRAPLTSLS*SAFRQGIFPTPHQY
Trigger: GTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGAGAGAAGTTAGCGGGGCTCTTCCTCCGTTCTCATTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR GCA 90 bp CAGGTCACCCGGAAACATAACATCACTACTTGTGCACCACAGCACTaGCACTCACCCAGAATCTGGGCATCATTCTTGATCCCTTCGTCT +
Preference number: 1 (lower is better)
Translates to: QVTRKHNITTCAPQH*HSPRIWASFLIPSS
Trigger: AGACGAAGGGATCAAGAATGATGCCCAGATTCTGGGTGAGTGGCAGTGCTGTGGTGCACAAGTAGTGATGTTATGTTTCCGGGTGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 90 bp CACCCCGCCCTTTTTGTTGCTTTAGGACCTCTCCTATTGACACACTaGGCCTCCTTGTTTGGAATGGTGACCTGTCCATATAAGTGTGCC +
Preference number: 1 (lower is better)
Translates to: HPALFVALGPLLLTH*ASLFGMVTCPYKCA
Trigger: GGCACACTTATATGGACAGGTCACCATTCCAAACAAGGAGGCCCAGTGTGTCAATAGGAGAGGTCCTAAAGCAACAAAAAGGGCGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 90 bp ACTGCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTaGGCAAGTTTCCCCATCTGTAGAAAAGGTGTAATATCAGTTTCC +
Preference number: 1 (lower is better)
Translates to: TALIQSMVLRTAWAP*ASFPICRKGVISVS
Trigger: GGAAACTGATATTACACCTTTTCTACAGATGGGGAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR GCA 90 bp AGTTCACCACCACCCTCTCTTTTCCCAAGTCAAGCAAGATCCACATaGCACCAAGTCCTGACGACATGGAGACTTCAATTCCAGGTCTCT +
Preference number: 1 (lower is better)
Translates to: SSPPPSLFPSQARST*HQVLTTWRLQFQVS
Trigger: AGAGACCTGGAATTGAAGTCTCCATGTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTGACTTGGGAAAAGAGAGGGTGGTGGTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR GCA 90 bp GTTAAGGATAAAGTCCCCAATTCCTTAACATGCGTGAGGATGCCATaGCCAATCTCCAGCCTCATCTCAAACACCAGCCCCCATTCTCTG +
Preference number: 1 (lower is better)
Translates to: VKDKVPNSLTCVRMP*PISSLISNTSPHSL
Trigger: CAGAGAATGGGGGCTGGTGTTTGAGATGAGGCTGGAGATTGGGCATGGCATCCTCACGCATGTTAAGGAATTGGGGACTTTATCCTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 90 bp TTAATATCCCTCTGCACCCCCTCCTTCCTACCACTTGGGAATCTTTaGGGAATAGTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGG +
Preference number: 1 (lower is better)
Translates to: LISLCTPSFLPLGNL*GIVRFRATYKKGPR
Trigger: CCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAACTATTCCCCAAAGATTCCCAAGTGGTAGGAAGGAGGGGGTGCAGAGGGATATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560096.1
3UTR GCA 90 bp ACTGGCTTCCAGGATGTTAAGGATAAAGTCCCCAATTCCTTAACATaGGTGAGGATGCCATGCCCAATCTCCAGCCTCATCTCAAACACC +
Preference number: 1 (lower is better)
Translates to: TGFQDVKDKVPNSLT*VRMPCPISSLISNT
Trigger: GGTGTTTGAGATGAGGCTGGAGATTGGGCATGGCATCCTCACGCATGTTAAGGAATTGGGGACTTTATCCTTAACATCCTGGAAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 90 bp TTCACAGATCTGGGTGTGGGTATACTACCCAAAAGGCAGTGTTCATaGGCCAAGAGAAATGGCTTCCTTCTCATAGGAACATTGCTCAGC +
Preference number: 1 (lower is better)
Translates to: FTDLGVGILPKRQCS*AKRNGFLLIGTLLS
Trigger: GCTGAGCAATGTTCCTATGAGAAGGAAGCCATTTCTCTTGGCTCATGAACACTGCCTTTTGGGTAGTATACCCACACCCAGATCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 90 bp TGTGGGTATACTACCCAAAAGGCAGTGTTCATGAGCCAAGAGAAATaGCTTCCTTCTCATAGGAACATTGCTCAGCTGAAAGGCCGTTTA +
Preference number: 1 (lower is better)
Translates to: CGYTTQKAVFMSQEK*LPSHRNIAQLKGRL
Trigger: TAAACGGCCTTTCAGCTGAGCAATGTTCCTATGAGAAGGAAGCCATTTCTCTTGGCTCATGAACACTGCCTTTTGGGTAGTATACCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 90 bp TGCTCAAGATTGGAGGCAAATACACCAAAATATGAATCATGTATCTaGTGGAATGGCAGAGTCAGGGTGTTTGATCTGTACAGGACCCTG +
Preference number: 1 (lower is better)
Translates to: CSRLEANTPKYESCI*WNGRVRVFDLYRTL
Trigger: CAGGGTCCTGTACAGATCAAACACCCTGACTCTGCCATTCCATCAGATACATGATTCATATTTTGGTGTATTTGCCTCCAATCTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 90 bp ACTGCCTCAGCATGGTTAATGTATTCACTTGAAGTAGAAATGTTTTaGGACTTAATGACCATGATTAATATCCCTCTGCACCCCCTCCTT +
Preference number: 1 (lower is better)
Translates to: TASAWLMYSLEVEMF*DLMTMINIPLHPLL
Trigger: AAGGAGGGGGTGCAGAGGGATATTAATCATGGTCATTAAGTCTCAAAACATTTCTACTTCAAGTGAATACATTAACCATGCTGAGGCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560096.1
3UTR CCA 90 bp AGATTACACAAAGTATGTACAGGGACAACCCACTTTGCTCAAGATTaGAGGCAAATACACCAAAATATGAATCATGTATCTGATGGAATG +
Preference number: 1 (lower is better)
Translates to: RLHKVCTGTTHFAQD*RQIHQNMNHVSDGM
Trigger: CATTCCATCAGATACATGATTCATATTTTGGTGTATTTGCCTCCAATCTTGAGCAAAGTGGGTTGTCCCTGTACATACTTTGTGTAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR GCA 90 bp GAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCCAATGCTACAGAAGGTaGTGGTGCCCCCAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: ESERCGPASHAWERCWPLQCYRR*WCPQRQ
Trigger: CTGCCTCTGGGGGCACCAGCACCTTCTGTAGCATTG...GAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR GCA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCAGTGGGGGAGTGACCTaGTCTGGGAACAGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFSGGVT*SGNSQP
Trigger: GGGCTGGCTGTTCCCAGAGCAGGTCACTCCCCCACT...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR TCA 90 bp GACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGGGCCAGGGTCAACATaGGGCTGGGTGCAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: DKGYSPLRTNTRSSYSQAGPGST*GWVQWL
Trigger: GAGCCACTGCACCCAGCCTCATGTTGACCCTGGCCC...AGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR CCA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCGCCTGGGAACGCTGTTaGCCTCTCTGGGAATGGCAT +
Preference number: 2 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFAWERC*PLWEWH
Trigger: ATGCCATTCCCAGAGAGGCCAACAGCGTTCCCAGGC...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CAA 90 bp GAACCAGTCCTGACCAGGGCAGGAGGTATGGCAAAATCAGGGGCTTaGGCCTCACCATCTGCCCATGCAGATGCCTATGCCACAGCAGCT +
Preference number: 2 (lower is better)
Translates to: EPVLTRAGGMAKSGA*ASPSAHADAYATAA
Trigger: AGCTGCTGTGGCATAGGCATCTGCATGGGCAGATGGTGAGGCCAAAGCCCCTGATTTTGCCATACCTCCTGCCCTGGTCAGGACTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR TCA 90 bp AAAGGGACCTCCCTCCAAGAAAAGAGTCCAGGCAAGGCAATGCAAGTGGGGGAGTGCCTGAACCAGTCCTaGCCAGGGCAGGAGGTATGG +
Preference number: 2 (lower is better)
Translates to: KGTSLQEKSPGKAMQVGECLNQS*PGQEVW
Trigger: CCATACCTCCTGCCCTGGTCAGGACTGGTTCAGGCA...CTCCCCCACTTGCATTGCCTTGCCTGGACTCTTTTCTTGGAGGGAGGTCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CCA 90 bp AGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTGGGAATGAACCAGGTAAGACTTaGCAGACTGTTCTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: RDADQPATPGNAVGLSGNEPGKT*QTVLSS
Trigger: GCTGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTC...ATTCCCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR CCA 90 bp AGGCCTGTAATCCCAGCTACTTGGGATTACAGTAATCCTCCTGCTGAGGCAGGACCAGCCAGCCACGCCTaGGAACGCTGTTGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: RPVIPATWDYSNPPAEAGPASHA*ERCWPL
Trigger: GAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGG...TCCTGCCTCAGCAGGAGGATTACTGTAATCCCAAGTAGCTGGGATTACAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CCA 90 bp CAGAGTGAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGAAGAGTATTCCAAGGTaGCTATGGGGAAGAACCAGG +
Preference number: 2 (lower is better)
Translates to: QSESERCGPASHAWERCWKSIPR*LWGRTR
Trigger: CCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTT...CCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTCACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR TCA 90 bp TCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTAGGGCCAGGGTCAACATaGGGCTGGGTGCAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: SAFRQGIFPTPHQYQVQLGPGST*GWVQWL
Trigger: GAGCCACTGCACCCAGCCTCATGTTGACCCTGGCCC...TAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR GCA 90 bp AGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTAGAAATGTTCCACAATaGTACAGAAGGTGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: SLRDADQPATPGNAVGLSRNVPQ*YRRCWC
Trigger: GCACCAGCACCTTCTGTAGCATTGTGGAACATTTCT...AGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR GCA 90 bp GGAAGGTACAAGGGACACGGAGGCTTGAAGCAGGATAGTACAGGCTACAACACAAAGGCTAGACTCACATaGAGGGAGGGGCCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: GRYKGHGGLKQDSTGYNTKARLT*REGPSL
Trigger: CAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTT...TGTGTTGTAGCCTGTACTATCCTGCTTCAAGCCTCCGTGTCCCTTGTACCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR GCA 90 bp TCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGAAGGCTAGACTCACATaGAGGGAGGGGCCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: SAALHLDKGYSPLRTNTRKARLT*REGPSL
Trigger: CAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTT...CCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR GCA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCCAAGCAAGATCCACATaGCACCAAGTCCTGACGACA +
Preference number: 2 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFQARST*HQVLTT
Trigger: TGTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTG...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR GCA 90 bp GCCCCTCCATGGGACCAACACAGCCCTTCCCAAACTGTTTCTCACAACAGCTGTGCAGGGTTTCAGCCCTaGTGTAGTTCCTCAACTCCC +
Preference number: 2 (lower is better)
Translates to: APPWDQHSPSQTVSHNSCAGFQP*CSSSTP
Trigger: GGGAGTTGAGGAACTACAGCAGGGCTGAAACCCTGC...ACAGCTGTTGTGAGAAACAGTTTGGGAAGGGCTGTGTTGGTCCCATGGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR GCA 90 bp AAAGGGACCTCCCTCCAAGAAAAGAGTCCAGGCAAGGCAATGCAAGTGGGGGAGCTAGCTTCCAAAAGCTaGCCCTACCAGCCACATGGG +
Preference number: 2 (lower is better)
Translates to: KGTSLQEKSPGKAMQVGELASKS*PYQPHG
Trigger: CCCATGTGGCTGGTAGGGGCAGCTTTTGGAAGCTAG...CTCCCCCACTTGCATTGCCTTGCCTGGACTCTTTTCTTGGAGGGAGGTCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CCA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCAGCCTCCCAAGGCGCTaGAACTACAGGCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: SGCLICTGPWNHTALIQSSLPRR*NYRHVP
Trigger: TGGCACATGCCTGTAGTTCCAGCGCCTTGGGAGGCT...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR TCA 90 bp AAGATAACACTCCCCATCTCCCCAGTAGATAAATGGACGAAAGAACGAATAACAGGCCACCCCCATGGCTaGGGTCCCAGCATGGCCTGC +
Preference number: 2 (lower is better)
Translates to: KITLPISPVDKWTKERITGHPHG*GPSMAC
Trigger: GCAGGCCATGCTGGGACCTCAGCCATGGGGGTGGCC...TGTTATTCGTTCTTTCGTCCATTTATCTACTGGGGAGATGGGGAGTGTTATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR GCA 90 bp GCCCCTCCATGGGACCAACACAGCCCTTCCCAAACTGTTTCTCACAACAGCTGTTCTTTCCATCTCCCCTaGCACTGCTATAGACCAGAC +
Preference number: 2 (lower is better)
Translates to: APPWDQHSPSQTVSHNSCSFHLP*HCYRPD
Trigger: GTCTGGTCTATAGCAGTGGCAGGGGAGATGGAAAGA...ACAGCTGTTGTGAGAAACAGTTTGGGAAGGGCTGTGTTGGTCCCATGGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR GCA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCAGCTGTCCCATGAAATaGTCCTCACAAAAACGGGTT +
Preference number: 2 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFSCPMK*SSQKRV
Trigger: AACCCGTTTTTGTGAGGAGCATTTCATGGGACAGCT...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CCA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCAAGAGTATTCCAAGGTaGCTATGGGGAAGAACCAGG +
Preference number: 2 (lower is better)
Translates to: HVMSRKARLTCREGPSLSKSIPR*LWGRTR
Trigger: CCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTT...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR CCA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCCGCTGTTGGCCTCTCTaGGAATGGCATCTACCAGGA +
Preference number: 2 (lower is better)
Translates to: SGCLICTGPWNHTALIQSRCWPL*EWHLPG
Trigger: TCCTGGTAGATGCCATTCCCAGAGAGGCCAACAGCG...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR TCA 90 bp GGAAGGTACAAGGGACACGGAGGCTTGAAGCAGGATAGTACAGGCTACAACACAGAAAGCAGGAAACAATaGGAACGGAGGAAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: GRYKGHGGLKQDSTGYNTESRKQ*ERRKSP
Trigger: GGGGCTCTTCCTCCGTTCTCATTGTTTCCTGCTTTC...TGTGTTGTAGCCTGTACTATCCTGCTTCAAGCCTCCGTGTCCCTTGTACCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR GCA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTAGAAATGTTCCACAATaGTACAGAAGGTGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSRNVPQ*YRRCWC
Trigger: GCACCAGCACCTTCTGTAGCATTGTGGAACATTTCT...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR CCA 90 bp AAAGGGACCTCCCTCCAAGAAAAGAGTCCAGGCAAGGCAATGCAAGTGGGGGAGGTCTCTTCACAGATCTaGGTGTGGGTATACTACCCA +
Preference number: 2 (lower is better)
Translates to: KGTSLQEKSPGKAMQVGEVSSQI*VWVYYP
Trigger: TGGGTAGTATACCCACACCCAGATCTGTGAAGAGAC...CTCCCCCACTTGCATTGCCTTGCCTGGACTCTTTTCTTGGAGGGAGGTCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR GCA 90 bp GCCCCTCCATGGGACCAACACAGCCCTTCCCAAACTGTTTCTCACAACAGCTGTCTAACTTCTCTCAGCTaGTCTGCATTTAGACAAGGG +
Preference number: 2 (lower is better)
Translates to: APPWDQHSPSQTVSHNSCLTSLS*SAFRQG
Trigger: CCCTTGTCTAAATGCAGAGCAGCTGAGAGAAGTTAG...ACAGCTGTTGTGAGAAACAGTTTGGGAAGGGCTGTGTTGGTCCCATGGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR GCA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCCCCAATTCCTTAACATaGGTGAGGATGCCATGCCCA +
Preference number: 2 (lower is better)
Translates to: SGCLICTGPWNHTALIQSPNSLT*VRMPCP
Trigger: TGGGCATGGCATCCTCACGCATGTTAAGGAATTGGG...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR GCA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCGAAGCTCAGAGGATTTaGTTGGTTCTGTTTGAAGAT +
Preference number: 2 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFEAQRI*LVLFED
Trigger: ATCTTCAAACAGAACCAAGCAAATCCTCTGAGCTTC...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CAA 90 bp CATCCAAGACACCCCGCCCTTTTTGTTGCTTTAGGACCTCTCCTATaGACACACTGGGCCTCCTTGTTTGGAATGGTGACCTGTCCATAT +
Preference number: 2 (lower is better)
Translates to: HPRHPALFVALGPLL*THWASLFGMVTCPY
Trigger: ATATGGACAGGTCACCATTCCAAACAAGGAGGCCCAGTGTGTCAATAGGAGAGGTCCTAAAGCAACAAAAAGGGCGGGGTGTCTTGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR TCA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCTGGCATGGGAACATTTaGGGGAGTAAAGAACTGGCA +
Preference number: 2 (lower is better)
Translates to: SGCLICTGPWNHTALIQSWHGNI*GSKELA
Trigger: TGCCAGTTCTTTACTCCCTCAAATGTTCCCATGCCA...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR TCA 90 bp CACAAAGTATGTACAGGGACAACCCACTTTGCTCAAGATTGGAGGCAAATACACGGCAGCAGAATAGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: HKVCTGTTHFAQDWRQIHGSRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCTATTCTGCTGCC...GTGTATTTGCCTCCAATCTTGAGCAAAGTGGGTTGTCCCTGTACATACTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR GCA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCGCTTTGAAATCTGAGTaGTTGGATGTAAATTCCTCT +
Preference number: 2 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFALKSE*LDVNSS
Trigger: AGAGGAATTTACATCCAAGCACTCAGATTTCAAAGC...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CCA 90 bp AGGCCTGTAATCCCAGCTACTTGGGATTACAGTAATCCTCCTGCTGAGGCAGGACCTATTAACAACCTGTaGAAGATCCCTCAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: RPVIPATWDYSNPPAEAGPINNL*KIPQAG
Trigger: ACCAGCCTGAGGGATCTTCCACAGGTTGTTAATAGG...TCCTGCCTCAGCAGGAGGATTACTGTAATCCCAAGTAGCTGGGATTACAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR GCA 90 bp GGAAGGTACAAGGGACACGGAGGCTTGAAGCAGGATAGTACAGGCTACAACACACTAACTTCTCTCAGCTaGTCTGCATTTAGACAAGGG +
Preference number: 2 (lower is better)
Translates to: GRYKGHGGLKQDSTGYNTLTSLS*SAFRQG
Trigger: CCCTTGTCTAAATGCAGAGCAGCTGAGAGAAGTTAG...TGTGTTGTAGCCTGTACTATCCTGCTTCAAGCCTCCGTGTCCCTTGTACCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR TCA 90 bp CACAAAGTATGTACAGGGACAACCCACTTTGCTCAAGATTGGAGGCAAATACACCAGAGTCAGGGTGTTTaGTCTGTACAGGACCCTGGA +
Preference number: 2 (lower is better)
Translates to: HKVCTGTTHFAQDWRQIHQSQGV*SVQDPG
Trigger: TCCAGGGTCCTGTACAGATCAAACACCCTGACTCTG...GTGTATTTGCCTCCAATCTTGAGCAAAGTGGGTTGTCCCTGTACATACTTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CCA 90 bp CACAAAGTATGTACAGGGACAACCCACTTTGCTCAAGATTGGAGGCAAATACACTGGCCTCTCTGGGAATaGCATCTACCAGGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: HKVCTGTTHFAQDWRQIHWPLWE*HLPGKQ
Trigger: CTGCTTTCCTGGTAGATGCCATTCCCAGAGAGGCCA...GTGTATTTGCCTCCAATCTTGAGCAAAGTGGGTTGTCCCTGTACATACTTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR GCA 90 bp AAGATAACACTCCCCATCTCCCCAGTAGATAAATGGACGAAAGAACGAATAACATTGCCCAGGCTGGAGTaGAGTGGCAATCTCAGCTCA +
Preference number: 2 (lower is better)
Translates to: KITLPISPVDKWTKERITLPRLE*SGNLSS
Trigger: TGAGCTGAGATTGCCACTGCACTCCAGCCTGGGCAA...TGTTATTCGTTCTTTCGTCCATTTATCTACTGGGGAGATGGGGAGTGTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR GCA 90 bp CACAAAGTATGTACAGGGACAACCCACTTTGCTCAAGATTGGAGGCAAATACACTTACCCAGGTTGGAGTaGAGTGGCACAGTCATACCT +
Preference number: 2 (lower is better)
Translates to: HKVCTGTTHFAQDWRQIHLPRLE*SGTVIP
Trigger: AGGTATGACTGTGCCACTGCACTCCAACCTGGGTAA...GTGTATTTGCCTCCAATCTTGAGCAAAGTGGGTTGTCCCTGTACATACTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CAA 90 bp CTTTTTGTTGCTTTAGGACCTCTCCTATTGACACACTGGGCCTCCTaGTTTGGAATGGTGACCTGTCCATATAAGTGTGCCATACCCTTT +
Preference number: 2 (lower is better)
Translates to: LFVALGPLLLTHWAS*FGMVTCPYKCAIPF
Trigger: AAAGGGTATGGCACACTTATATGGACAGGTCACCATTCCAAACAAGGAGGCCCAGTGTGTCAATAGGAGAGGTCCTAAAGCAACAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 72 bp AGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTaGCCTCTCTGGGAATGGCATCTACCAGGAAAGCAG +
Preference number: 3 (lower is better)
Translates to: RCGPASHAWERC*PLWEWHLPGKQ
Trigger: CTGCTTTCCTGGTAGATGCCATTCCCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR GCA 72 bp CTCAAAACTGTAGCCTGGCAGAGTGAGTCTGAGAGATaGGGACCAGCCAGCCACGCCTGGGAACGCTGTTGG +
Preference number: 3 (lower is better)
Translates to: LKTVAWQSESER*GPASHAWERCW
Trigger: CCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTCACTCTGCCAGGCTACAGTTTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR GCA 72 bp ATAGACCAGACCCCTCTAGCCTCTCACCCAGGCAACTaGAGCAGTCTCCTAAAGGAGCAACTCGCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: IDQTPLASHPGN*SSLLKEQLASS
Trigger: GCTGGAGGCGAGTTGCTCCTTTAGGAGACTGCTGCAGTTGCCTGGGTGAGAGGCTAGAGGGGTCTGGTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 72 bp AGCCACGCCTGGGAACGCTGTTGGCCTCTCTGGGAATaGCATCTACCAGGAAAGCAGCCAGGGATGTCAGAT +
Preference number: 3 (lower is better)
Translates to: SHAWERCWPLWE*HLPGKQPGMSD
Trigger: ATCTGACATCCCTGGCTGCTTTCCTGGTAGATGCCATTCCCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR CAA 90 bp AAAGGGACCTCCCTCCAAGAAAAGAGTCCAGGCAAGGCAATGCAAGTGGGGGAGTTATCCTCAGCCCACTaGGTTTTCCCATCCCTAGGG +
Preference number: 3 (lower is better)
Translates to: KGTSLQEKSPGKAMQVGELSSAH*VFPSLG
Trigger: CCCTAGGGATGGGAAAACCAAGTGGGCTGAGGATAA...CTCCCCCACTTGCATTGCCTTGCCTGGACTCTTTTCTTGGAGGGAGGTCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR GCA 72 bp GAGAACGGAGGAAGAGCCCCGCTAACTTCTCTCAGCTaGTCTGCATTTAGACAAGGGATATTCCCCACTCCG +
Preference number: 3 (lower is better)
Translates to: ENGGRAPLTSLS*SAFRQGIFPTP
Trigger: CGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGAGAGAAGTTAGCGGGGCTCTTCCTCCGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR GCA 72 bp ATCAGGGGCTTTGGCCTCACCATCTGCCCATGCAGATaGCTATGCCACAGCAGCTTCCTATTTTCTCCCTTC +
Preference number: 3 (lower is better)
Translates to: IRGFGLTICPCR*LCHSSFLFSPF
Trigger: GAAGGGAGAAAATAGGAAGCTGCTGTGGCATAGGCATCTGCATGGGCAGATGGTGAGGCCAAAGCCCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR GCA 72 bp AGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTaGCCTGATTCAAAGCATGGTTCTGCGGACTGCCTG +
Preference number: 3 (lower is better)
Translates to: RVFDLYRTLEPH*PDSKHGSADCL
Trigger: CAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 72 bp ACTGCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTaGGCACCCTGGGCAAGTTTCCCCATCTGTAGAAAA +
Preference number: 3 (lower is better)
Translates to: TALIQSMVLRTA*APWASFPICRK
Trigger: TTTTCTACAGATGGGGAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CAA 90 bp AGGCCTGTAATCCCAGCTACTTGGGATTACAGTAATCCTCCTGCTGAGGCAGGAGTGACTCTGGGCAGGTaGCTTAACCTGTCTGAGACC +
Preference number: 3 (lower is better)
Translates to: RPVIPATWDYSNPPAEAGVTLGR*LNLSET
Trigger: GGTCTCAGACAGGTTAAGCAACCTGCCCAGAGTCAC...TCCTGCCTCAGCAGGAGGATTACTGTAATCCCAAGTAGCTGGGATTACAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CAA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCGCAAAATCAGGGGCTTaGGCCTCACCATCTGCCCAT +
Preference number: 3 (lower is better)
Translates to: SGCLICTGPWNHTALIQSAKSGA*ASPSAH
Trigger: ATGGGCAGATGGTGAGGCCAAAGCCCCTGATTTTGC...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CAA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCCCAGAGTTCTGGGGTTaGCTTGTTTGTTTTTCAGAG +
Preference number: 3 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFPEFWG*LVCFSE
Trigger: CTCTGAAAAACAAACAAGCAAACCCCAGAACTCTGG...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 72 bp TTCTCTGAGCTCCAGACACAATGGTCTTTCCCTTCCTaGAGCCCATCCAAGACACCCCGCCCTTTTTGTTGC +
Preference number: 3 (lower is better)
Translates to: FSELQTQWSFPS*SPSKTPRPFCC
Trigger: GCAACAAAAAGGGCGGGGTGTCTTGGATGGGCTTCAGGAAGGGAAAGACCATTGTGTCTGGAGCTCAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR GCA 72 bp AAAGTCCCCAATTCCTTAACATGCGTGAGGATGCCATaGCCAATCTCCAGCCTCATCTCAAACACCAGCCCC +
Preference number: 3 (lower is better)
Translates to: KVPNSLTCVRMP*PISSLISNTSP
Trigger: GGGGCTGGTGTTTGAGATGAGGCTGGAGATTGGGCATGGCATCCTCACGCATGTTAAGGAATTGGGGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 72 bp GAGAAAGTCCCATTCAGACACAGAACACCAGTGAAGTaGCTACCACATCCTCTGGCCCCTGTTTCCAAGACC +
Preference number: 3 (lower is better)
Translates to: EKVPFRHRTPVK*LPHPLAPVSKT
Trigger: GGTCTTGGAAACAGGGGCCAGAGGATGTGGTAGCCACTTCACTGGTGTTCTGTGTCTGAATGGGACTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CAA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCACAGTGGTCATGGGTTaGGTTTTAGCAGAGCTTGTT +
Preference number: 3 (lower is better)
Translates to: HVMSRKARLTCREGPSLSTVVMG*VLAELV
Trigger: AACAAGCTCTGCTAAAACCAAACCCATGACCACTGT...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR TCA 72 bp AGTGCTTTAGACAGCAGGATGTCTAAAGACACTGGGTaGCTCTACCCCCAGTCAGTGTCCCCAGCTATCCTT +
Preference number: 3 (lower is better)
Translates to: SALDSRMSKDTG*LYPQSVSPAIL
Trigger: AAGGATAGCTGGGGACACTGACTGGGGGTAGAGTCACCCAGTGTCTTTAGACATCCTGCTGTCTAAAGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 72 bp AACTCGCCTCCAGCTGCTCGGCAGTCAAGTGACCTTTaGAACACAGATCAGATCTTCTCACTCTCCATGGGA +
Preference number: 3 (lower is better)
Translates to: NSPPAARQSSDL*NTDQIFSLSMG
Trigger: TCCCATGGAGAGTGAGAAGATCTGATCTGTGTTTCAAAGGTCACTTGACTGCCGAGCAGCTGGAGGCGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 72 bp AAGGAGCAACTCGCCTCCAGCTGCTCGGCAGTCAAGTaGCCTTTGAAACACAGATCAGATCTTCTCACTCTC +
Preference number: 3 (lower is better)
Translates to: KEQLASSCSAVK*PLKHRSDLLTL
Trigger: GAGAGTGAGAAGATCTGATCTGTGTTTCAAAGGTCACTTGACTGCCGAGCAGCTGGAGGCGAGTTGCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 72 bp ATGGCAGAGTCAGGGTGTTTGATCTGTACAGGACCCTaGAACCACACTGCCCTGATTCAAAGCATGGTTCTG +
Preference number: 3 (lower is better)
Translates to: MAESGCLICTGP*NHTALIQSMVL
Trigger: CAGAACCATGCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGACTCTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CAA 90 bp AAGGGTCATCATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCACAGTGGTCATGGGTTaGGTTTTAGCAGAGCTTGTT +
Preference number: 3 (lower is better)
Translates to: KGHHVMSRKARLTCREGPTVVMG*VLAELV
Trigger: AACAAGCTCTGCTAAAACCAAACCCATGACCACTGT...GGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATGATGACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR-3UTR CAA 90 bp CTACCACATCCTCTGGCCCCTGTTTCCAAGACCTTTCTGAAGGGCAAGGAAGCATTGACAGCTCTGGGTTaGAATCCTGATTCTGCTACT +
Preference number: 3 (lower is better)
Translates to: LPHPLAPVSKTFLKGKEALTALG*NPDSAT
Trigger: AGTAGCAGAATCAGGATTCAAACCCAGAGCTGTCAA...TGCTTCCTTGCCCTTCAGAAAGGTCTTGGAAACAGGGGCCAGAGGATGTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 72 bp TCCCAAGTCAAGCAAGATCCACATGCCACCAAGTCCTaGCGACATGGAGACTTCAATTCCAGGTCTCTTCAC +
Preference number: 3 (lower is better)
Translates to: SQVKQDPHATKS*RHGDFNSRSLH
Trigger: GTGAAGAGACCTGGAATTGAAGTCTCCATGTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTGACTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 72 bp TTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTTaGCAGACTGTTCTCTCCAGCTCCAGAGTAGAAGTT +
Preference number: 3 (lower is better)
Translates to: FQGGYGEEPGKT*QTVLSSSRVEV
Trigger: AACTTCTACTCTGGAGCTGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
3UTR CCA 72 bp GCTAGTTTCAGTTCTCTATACTTCTTAGCCACAGGCTaGGCTCCTGCTAAACAGCAGGTCACCCGGAAACAT +
Preference number: 3 (lower is better)
Translates to: ASFSSLYFLATG*APAKQQVTRKH
Trigger: ATGTTTCCGGGTGACCTGCTGTTTAGCAGGAGCCCAGCCTGTGGCTAAGAAGTATAGAGAACTGAAACTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 72 bp ATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTaGGCAAGTTTCCCCATCTGTAGAAAAGGTGTAATA +
Preference number: 3 (lower is better)
Translates to: IQSMVLRTAWAP*ASFPICRKGVI
Trigger: TATTACACCTTTTCTACAGATGGGGAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CAA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCCTGGGGTTTGCTTGTTaGTTTTTCAGAGATAGGGTC +
Preference number: 3 (lower is better)
Translates to: SGCLICTGPWNHTALIQSLGFAC*FFRDRV
Trigger: GACCCTATCTCTGAAAAACAAACAAGCAAACCCCAG...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 72 bp GCCCTTCCCAAACTGTTTCTCACAACAGCTGTCCCATaGAATGCTCCTCACAAAAACGGGTTCTCTGACCAA +
Preference number: 3 (lower is better)
Translates to: ALPKLFLTTAVP*NAPHKNGFSDQ
Trigger: TTGGTCAGAGAACCCGTTTTTGTGAGGAGCATTTCATGGGACAGCTGTTGTGAGAAACAGTTTGGGAAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR GCA 72 bp CGGAAACATAACATCACTACTTGTGCACCACAGCACTaGCACTCACCCAGAATCTGGGCATCATTCTTGATC +
Preference number: 3 (lower is better)
Translates to: RKHNITTCAPQH*HSPRIWASFLI
Trigger: GATCAAGAATGATGCCCAGATTCTGGGTGAGTGGCAGTGCTGTGGTGCACAAGTAGTGATGTTATGTTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CAA 90 bp CACAAAGTATGTACAGGGACAACCCACTTTGCTCAAGATTGGAGGCAAATACACTTAGGACCTCTCCTATaGACACACTGGGCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: HKVCTGTTHFAQDWRQIHLGPLL*THWASL
Trigger: CAAGGAGGCCCAGTGTGTCAATAGGAGAGGTCCTAA...GTGTATTTGCCTCCAATCTTGAGCAAAGTGGGTTGTCCCTGTACATACTTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR-3UTR CAA 90 bp GCCCCTCCATGGGACCAACACAGCCCTTCCCAAACTGTTTCTCACAACAGCTGTAAACACCACCACTTTTaGTTTCTAGCCCTATTAACA +
Preference number: 3 (lower is better)
Translates to: APPWDQHSPSQTVSHNSCKHHHF*FLALLT
Trigger: TGTTAATAGGGCTAGAAACAAAAAGTGGTGGTGTTT...ACAGCTGTTGTGAGAAACAGTTTGGGAAGGGCTGTGTTGGTCCCATGGAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 72 bp CTGGGTGTGGGTATACTACCCAAAAGGCAGTGTTCATaGGCCAAGAGAAATGGCTTCCTTCTCATAGGAACA +
Preference number: 3 (lower is better)
Translates to: LGVGILPKRQCS*AKRNGFLLIGT
Trigger: TGTTCCTATGAGAAGGAAGCCATTTCTCTTGGCTCATGAACACTGCCTTTTGGGTAGTATACCCACACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 72 bp CTTTTTGTTGCTTTAGGACCTCTCCTATTGACACACTaGGCCTCCTTGTTTGGAATGGTGACCTGTCCATAT +
Preference number: 3 (lower is better)
Translates to: LFVALGPLLLTH*ASLFGMVTCPY
Trigger: ATATGGACAGGTCACCATTCCAAACAAGGAGGCCCAGTGTGTCAATAGGAGAGGTCCTAAAGCAACAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 72 bp TTGGAGGCAAATACACCAAAATATGAATCATGTATCTaGTGGAATGGCAGAGTCAGGGTGTTTGATCTGTAC +
Preference number: 3 (lower is better)
Translates to: LEANTPKYESCI*WNGRVRVFDLY
Trigger: GTACAGATCAAACACCCTGACTCTGCCATTCCATCAGATACATGATTCATATTTTGGTGTATTTGCCTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 72 bp TCTCATGAGAAAATGGGAATAATAATCAGTACCTCATaGACTGTTGTGAGAAGTACGATATCGCAAGTGCTT +
Preference number: 3 (lower is better)
Translates to: SHEKMGIIISTS*TVVRSTISQVL
Trigger: AAGCACTTGCGATATCGTACTTCTCACAACAGTCCATGAGGTACTGATTATTATTCCCATTTTCTCATGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CCA 72 bp AAAGTATGTACAGGGACAACCCACTTTGCTCAAGATTaGAGGCAAATACACCAAAATATGAATCATGTATCT +
Preference number: 3 (lower is better)
Translates to: KVCTGTTHFAQD*RQIHQNMNHVS
Trigger: AGATACATGATTCATATTTTGGTGTATTTGCCTCCAATCTTGAGCAAAGTGGGTTGTCCCTGTACATACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR TCA 72 bp GCATGGTTAATGTATTCACTTGAAGTAGAAATGTTTTaGGACTTAATGACCATGATTAATATCCCTCTGCAC +
Preference number: 3 (lower is better)
Translates to: AWLMYSLEVEMF*DLMTMINIPLH
Trigger: GTGCAGAGGGATATTAATCATGGTCATTAAGTCTCAAAACATTTCTACTTCAAGTGAATACATTAACCATGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR GCA 90 bp GAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCCCACTCCTCGTCCTCTaGCCCATCCCCCTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: ESERCGPASHAWERCWPLPLLVL*PIPLLS
Trigger: CGAGAGCAGGGGGATGGGGCAGAGGACGAGGAGTGG...GAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCGGCCACCCCCATGGCTaGGGTCCCAGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFGHPHG*GPSMAC
Trigger: GCAGGCCATGCTGGGACCTCAGCCATGGGGGTGGCC...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp AGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTGGGAATAGTGGGGGAGTGACCTaGTCTGGGAACAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RDADQPATPGNAVGLSGNSGGVT*SGNSQP
Trigger: GGGCTGGCTGTTCCCAGAGCAGGTCACTCCCCCACT...ATTCCCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp CAGAGTGAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGGCGGAGAGGCGGCTTTaGCAACCCCAGTTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: QSESERCGPASHAWERCWAERRL*QPQFSP
Trigger: GGGGGAAAACTGGGGTTGCCAAAGCCGCCTCTCCGC...CCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTCACTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460685.1
CDS-3UTR TCA 90 bp GAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCCATCACCTCCATCTCTaGCTCGGGCATCCAGAACGC +
Preference number: 4 (lower is better)
Translates to: ESERCGPASHAWERCWPLHHLHL*LGHPER
Trigger: GCGTTCTGGATGCCCGAGTCAGAGATGGAGGTGATG...GAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp GCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTCTCTCCAGCTCCAGAGGGCCGGAGGTCGGCGTaGGGCGAAGCCCAGCCTTCG +
Preference number: 4 (lower is better)
Translates to: AMGKNQVRLGRLFSPAPEGRRSA*GEAQPS
Trigger: CGAAGGCTGGGCTTCGCCTCACGCCGACCTCCGGCC...CTCTGGAGCTGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460685.1
CDS-3UTR TCA 90 bp AGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTGGGAATGGCAGCAGAATAGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RDADQPATPGNAVGLSGNGSRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCTATTCTGCTGCC...ATTCCCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp CAGAGTGAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCAATGCTACAGAAGGTaGTGGTGCCCCCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QSESERCGPASHAWERCWQCYRR*WCPQRQ
Trigger: CTGCCTCTGGGGGCACCAGCACCTTCTGTAGCATTG...CCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTCACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp GAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCCCGAGATTGAGCCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ESERCGPASHAWERCWPLPRLSH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGGCTCAATCTCGG...GAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTGCTCAACCACCTCCCTaGCCACCCCCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSAQPPP*PPPWLR
Trigger: CCTCAGCCATGGGGGTGGCCAGGGAGGTGGTTGAGC...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp CAGAGTGAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGAGTGTCCCTACCTGCTaGGCCTGGGACCCTATTCTT +
Preference number: 4 (lower is better)
Translates to: QSESERCGPASHAWERCWSVPTC*AWDPIL
Trigger: AAGAATAGGGTCCCAGGCTCAGCAGGTAGGGACACT...CCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTCACTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCTCTGCCCCATCCCCCTaGTCTCGGATCTCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: HVMSRKARLTCREGPSLSSAPSP*SRISAA
Trigger: TGCAGCGGAGATCCGAGAGCAGGGGGATGGGGCAGA...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp AGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTGGCGATGGATGTGACTaGGCCGGATATACAGCACGT +
Preference number: 4 (lower is better)
Translates to: SLRDADQPATPGNAVGLSGDGCD*AGYTAR
Trigger: ACGTGCTGTATATCCGGCCCAGTCACATCCATCGCC...AGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp CAGAGTGAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGTGTCAGTGTCCCCCTTaGCTTCCACCTTGTAGGACG +
Preference number: 4 (lower is better)
Translates to: QSESERCGPASHAWERCWCQCPP*LPPCRT
Trigger: CGTCCTACAAGGTGGAAGCCAAGGGGGACACTGACA...CCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTCACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp GAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCAGAACACCAGTGAAGTaGCTACCACATCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ESERCGPASHAWERCWPLRTPVK*LPHPLA
Trigger: GGCCAGAGGATGTGGTAGCCACTTCACTGGTGTTCT...GAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACCCGGGAGCGGCGGACTaGAGGGGCGGACTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYPGAAD*RGGLKA
Trigger: CGCCTTCAGTCCGCCCCTCCAGTCCGCCGCTCCCGG...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460685.1
CDS-3UTR TCA 90 bp GGAAGGTACAAGGGACACGGAGGCTTGAAGCAGGATAGTACAGGCTACAACACATCAGCGCCTCGGGCGTaGGCCTGTCAGTGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GRYKGHGGLKQDSTGYNTSAPRA*ACQCPP
Trigger: AGGGGGACACTGACAGGCTCACGCCCGAGGCGCTGA...TGTGTTGTAGCCTGTACTATCCTGCTTCAAGCCTCCGTGTCCCTTGTACCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp GCCCCTCCATGGGACCAACACAGCCCTTCCCAAACTGTTTCTCACAACAGCTGTGCAGCTCTGGCTTGTTaGCCAGCCCCTTCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: APPWDQHSPSQTVSHNSCAALAC*PAPSAP
Trigger: AGGCGCTGAAGGGGCTGGTCAACAAGCCAGAGCTGC...ACAGCTGTTGTGAGAAACAGTTTGGGAAGGGCTGTGTTGGTCCCATGGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp GACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGGCCTCATAACCCTGTaGCGACAGGGCCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: DKGYSPLRTNTRSSYSQAGLITL*RQGLAL
Trigger: GAGGGCCAGGCCCTGTCGTCACAGGGTTATGAGGCC...AGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460685.1
CDS-3UTR GCA 90 bp ATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGACAGGCGTGAGCCACTaGGCCCGGCATGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: IFPTPHQYQVQLLSGCPRTGVSH*ARHGPV
Trigger: AACTGGGCCATGCCGGGCGCAGTGGCTCACGCCTGT...CCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTCAGCGCGAGCAGCTCTaGCTTGTTGACCAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSQREQL*LVDQPL
Trigger: AAGGGGCTGGTCAACAAGCCAGAGCTGCTCGCGCTG...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp CTACCACATCCTCTGGCCCCTGTTTCCAAGACCTTTCTGAAGGGCAAGGAAGCACCAGCCAGCCACGCCTaGGAACGCTGTTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LPHPLAPVSKTFLKGKEAPASHA*ERCWPL
Trigger: GAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGG...TGCTTCCTTGCCCTTCAGAAAGGTCTTGGAAACAGGGGCCAGAGGATGTGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCCCTTCCTGGTGGCGCTaGAGTTGGGCTCGATTTCAT +
Preference number: 4 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFPSWWR*SWARFH
Trigger: ATGAAATCGAGCCCAACTTCAGCGCCACCAGGAAGG...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp AGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTGGGAATCTCAAGTTTGGCCAATaGATCCAGGAAGGGACCATC +
Preference number: 4 (lower is better)
Translates to: RDADQPATPGNAVGLSGNLKFGQ*IQEGTI
Trigger: GATGGTCCCTTCCTGGATTCATTGGCCAAACTTGAG...ATTCCCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp TCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGGGGCCAGGGTCAACATaGGGCTGGGTGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SAALHLDKGYSPLRTNTRGPGST*GWVQWL
Trigger: GAGCCACTGCACCCAGCCTCATGTTGACCCTGGCCC...CCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp GGAAGGTACAAGGGACACGGAGGCTTGAAGCAGGATAGTACAGGCTACAACACACCACTCCTCGTCCTCTaGCCCATCCCCCTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GRYKGHGGLKQDSTGYNTPLLVL*PIPLLS
Trigger: CGAGAGCAGGGGGATGGGGCAGAGGACGAGGAGTGG...TGTGTTGTAGCCTGTACTATCCTGCTTCAAGCCTCCGTGTCCCTTGTACCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp AAGGGTCATCATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCCATGGTTCTGCGGACTaGCTGGGCACCCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: KGHHVMSRKARLTCREGPHGSAD*LGTLGK
Trigger: CTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATG...GGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATGATGACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TTTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGGGGGTCCCAGGCCCCTaGCAGCCGGACGCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: FSRACSKSIPRWLWGRTRGVPGP*QPDALH
Trigger: GTGCAGAGCGTCCGGCTGCCAGGGGCCTGGGACCCC...CCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTACTGCCTGGGCACCCTaGGCAAGTTTCCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSTAWAP*ASFPIC
Trigger: ACAGATGGGGAAACTTGCCCAGGGTGCCCAGGCAGT...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCTGTGACGACAGGGCCTaGCCCTCCAAATCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: HVMSRKARLTCREGPSLSCDDRA*PSKSSS
Trigger: TGAGGAGGATTTGGAGGGCCAGGCCCTGTCGTCACA...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460685.1
3UTR CAA 72 bp CTGACCAGGGCAGGAGGTATGGCAAAATCAGGGGCTTaGGCCTCACCATCTGCCCATGCAGATGCCTATGCC +
Preference number: 4 (lower is better)
Translates to: LTRAGGMAKSGA*ASPSAHADAYA
Trigger: GGCATAGGCATCTGCATGGGCAGATGGTGAGGCCAAAGCCCCTGATTTTGCCATACCTCCTGCCCTGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp ACTTCTCTCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAACTGTGTGGTCGGGGGTaGGGCTCTCTGTCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: TSLSCSAFRQGIFPTPHQLCGRG*GSLSAR
Trigger: TCGCGCTGACAGAGAGCCTCACCCCCGACCACACAG...TTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGAGAGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACCTGTGTGGTCGGGGGTaGGGCTCTCTGTCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYLCGRG*GSLSAR
Trigger: TCGCGCTGACAGAGAGCCTCACCCCCGACCACACAG...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACGGGCCAGGGTCAACATaGGGCTGGGTGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYGPGST*GWVQWL
Trigger: GAGCCACTGCACCCAGCCTCATGTTGACCCTGGCCC...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp ACCCTCTCTTTTCCCAAGTCAAGCAAGATCCACATGCCACCAAGTCCTGACGACGCCTGCCCTAATGCCTaGACCAGTCCTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLSFPKSSKIHMPPSPDDACPNA*TSPDQG
Trigger: GCCCTGGTCAGGACTGGTTCAGGCATTAGGGCAGGC...GTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTGACTTGGGAAAAGAGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTAGGTGGAGGTTGCAGTaGGCCGAGATTGAGCCATTG +
Preference number: 4 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSRWRLQ*AEIEPL
Trigger: CAATGGCTCAATCTCGGCTCACTGCAACCTCCACCT...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCCAGAGTCAGGGTGTTTaGTCTGTACAGGACCCTGGA +
Preference number: 4 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFQSQGV*SVQDPG
Trigger: TCCAGGGTCCTGTACAGATCAAACACCCTGACTCTG...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp ACCCTCTCTTTTCCCAAGTCAAGCAAGATCCACATGCCACCAAGTCCTGACGACCGCCGTCGTGGTAGATaGGGCTCATTCTCCCGACCG +
Preference number: 4 (lower is better)
Translates to: TLSFPKSSKIHMPPSPDDRRRGR*GSFSRP
Trigger: CGGTCGGGAGAATGAGCCGCATCTACCACGACGGCG...GTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTGACTTGGGAAAAGAGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp GCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTCTCTCCAGCTCCAGAGAAGGCTAGACTCACATaGAGGGAGGGGCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: AMGKNQVRLGRLFSPAPEKARLT*REGPSL
Trigger: CAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTT...CTCTGGAGCTGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp GACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTCAGAACGCCACTGTGTaGTCGGGGGTGAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: DKGYSPLRTNTRSSYSQAQNATV*SGVRLS
Trigger: AGAGAGCCTCACCCCCGACCACACAGTGGCGTTCTG...AGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCTGGCCTCTCTGGGAATaGCATCTACCAGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFWPLWE*HLPGKQ
Trigger: CTGCTTTCCTGGTAGATGCCATTCCCAGAGAGGCCA...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp ACTTCTCTCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAACCAGCCAGCCACGCCTaGGAACGCTGTTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TSLSCSAFRQGIFPTPHQPASHA*ERCWPL
Trigger: GAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGG...TTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGAGAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp AGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTCTCAAAACTGTAGCCTaGCAGAGTGAGTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: SLRDADQPATPGNAVGLSLKTVA*QSESER
Trigger: TCTCTCAGACTCACTCTGCCAGGCTACAGTTTTGAG...AGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp CAGAGTGAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCAAGTCCTGACGACATaGAGACTTCAATTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QSESERCGPASHAWERCWQVLTT*RLQFQV
Trigger: GACCTGGAATTGAAGTCTCCATGTCGTCAGGACTTG...CCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTCACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTCCAGGGCAGGAGGTATaGCAAAATCAGGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSPGQEV*QNQGLW
Trigger: CCAAAGCCCCTGATTTTGCCATACCTCCTGCCCTGG...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp AAGGGTCATCATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCCGCTCCTTCCTGCCATaGGTGTCCAAGATGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KGHHVMSRKARLTCREGPRSFLP*VSKMLC
Trigger: GCACAGCATCTTGGACACTCATGGCAGGAAGGAGCG...GGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATGATGACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp TTTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTCAGCGCCTCGGGCGTaGGCCTGTCAGTGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FSRACSKSIPRWLWGRTRSAPRA*ACQCPP
Trigger: AGGGGGACACTGACAGGCTCACGCCCGAGGCGCTGA...CCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACGCAGCTCTGGCTTGTTaGCCAGCCCCTTCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYAALAC*PAPSAP
Trigger: AGGCGCTGAAGGGGCTGGTCAACAAGCCAGAGCTGC...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCGAAAGCAGGAAACAATaGGAACGGAGGAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: HVMSRKARLTCREGPSLSESRKQ*ERRKSP
Trigger: GGGGCTCTTCCTCCGTTCTCATTGTTTCCTGCTTTC...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp CTACCACATCCTCTGGCCCCTGTTTCCAAGACCTTTCTGAAGGGCAAGGAAGCACCAGCCCCCATTCTCTaGGCTCCAGACACAATGGTC +
Preference number: 4 (lower is better)
Translates to: LPHPLAPVSKTFLKGKEAPAPIL*APDTMV
Trigger: GACCATTGTGTCTGGAGCTCAGAGAATGGGGGCTGG...TGCTTCCTTGCCCTTCAGAAAGGTCTTGGAAACAGGGGCCAGAGGATGTGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTTCATTAGGCCCATGGTaGAAGGCAAGCTGGACACTG +
Preference number: 4 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSSLGPW*KASWTL
Trigger: CAGTGTCCAGCTTGCCTTTCACCATGGGCCTAATGA...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCTGGGAGGCTGAGGAGTaGGGATCACTTGAGATCAGA +
Preference number: 4 (lower is better)
Translates to: HVMSRKARLTCREGPSLSWEAEE*GSLEIR
Trigger: TCTGATCTCAAGTGATCCTCACTCCTCAGCCTCCCA...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp GAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTGGCAGCCGGACGCTCTaGACCGCCTTGTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ELVQRVFQGGYGEEPGKTGSRTL*TALFRS
Trigger: GCTCCGGAACAAGGCGGTGCAGAGCGTCCGGCTGCC...AGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTAGTAGCGCTCCTTCCTaGCATGAGTGTCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSSSAPS*HECPRC
Trigger: GCATCTTGGACACTCATGGCAGGAAGGAGCGCTACT...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp AAGGGTCATCATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCCTCTCGGATCTCCGCTaGAGCCCCCTTCGAACACTT +
Preference number: 4 (lower is better)
Translates to: KGHHVMSRKARLTCREGPLSDLR*SPLRTL
Trigger: AAGTGTTCGAAGGGGGCTGCAGCGGAGATCCGAGAG...GGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATGATGACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp GGGAATCTTTGGGGAATAGTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTCTGCCCCATCCCCCTaGTCTCGGATCTCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GNLWGIVRFRATYKKGPRSAPSP*SRISAA
Trigger: TGCAGCGGAGATCCGAGAGCAGGGGGATGGGGCAGA...CCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAACTATTCCCCAAAGATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR GCA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCAAGGCTAGACTCACATaGAGGGAGGGGCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SGCLICTGPWNHTALIQSKARLT*REGPSL
Trigger: CAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTT...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp TCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGAGTGAGTCTGAGAGATaGGGACCAGCCAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: SAALHLDKGYSPLRTNTRSESER*GPASHA
Trigger: GGCGTGGCTGGCTGGTCCGCATCTCTCAGACTCACT...CCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCCCCCAGCTATCCTTCTaGTCAACCACCTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SGCLICTGPWNHTALIQSPQLSF*STTSLA
Trigger: GGCCAGGGAGGTGGTTGAGCAGAAGGATAGCTGGGG...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCGGAACTACAGGCATGTaGCACCATGTCCGGGTAATT +
Preference number: 4 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFGTTGM*HHVRVI
Trigger: AATTACCCGGACATGGTGGCACATGCCTGTAGTTCC...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp CAGAGTGAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGAGGGACAACCCACTTTaGTCAAGATTGGAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: QSESERCGPASHAWERCWRDNPL*SRLEAN
Trigger: ATTTGCCTCCAATCTTGAGCAAAGTGGGTTGTCCCT...CCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTCACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp AAAGGGACCTCCCTCCAAGAAAAGAGTCCAGGCAAGGCAATGCAAGTGGGGGAGGGCGATGGATGTGACTaGGCCGGATATACAGCACGT +
Preference number: 4 (lower is better)
Translates to: KGTSLQEKSPGKAMQVGEGDGCD*AGYTAR
Trigger: ACGTGCTGTATATCCGGCCCAGTCACATCCATCGCC...CTCCCCCACTTGCATTGCCTTGCCTGGACTCTTTTCTTGGAGGGAGGTCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp AGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTGGGAATCGATTTCATTTCCCTTaGCGTCGAATTTACGGCGAT +
Preference number: 4 (lower is better)
Translates to: RDADQPATPGNAVGLSGNRFHFP*RRIYGD
Trigger: ATCGCCGTAAATTCGACGCCAAGGGAAATGAAATCG...ATTCCCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTTGGCCTCTCTGGGAATaGCATCTACCAGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSWPLWE*HLPGKQ
Trigger: CTGCTTTCCTGGTAGATGCCATTCCCAGAGAGGCCA...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp GACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGCTGAGGTCCCAGCATaGCCTGCCTGTGAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: DKGYSPLRTNTRSSYSQAAEVPA*PACEKV
Trigger: GACTTTCTCACAGGCAGGCCATGCTGGGACCTCAGC...AGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp AGGCCTGTAATCCCAGCTACTTGGGATTACAGTAATCCTCCTGCTGAGGCAGGAGACTGCACCCAGCCCTaGGGCCCTGTTCTTATCCTC +
Preference number: 4 (lower is better)
Translates to: RPVIPATWDYSNPPAEAGDCTQP*GPVLIL
Trigger: GAGGATAAGAACAGGGCCCCAGGGCTGGGTGCAGTC...TCCTGCCTCAGCAGGAGGATTACTGTAATCCCAAGTAGCTGGGATTACAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCCAGCGCAGTTGTAAATaGAATGGTCCCTTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: HVMSRKARLTCREGPSLSQRSCK*NGPFGL
Trigger: GAGGCCGAAGGGACCATTCCATTTACAACTGCGCTG...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460685.1
CDS-3UTR TCA 90 bp AAGACACCCCGCCCTTTTTGTTGCTTTAGGACCTCTCCTATTGACACACTGGGCCGCTCCTTCCTGCCATaGGTGTCCAAGATGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KTPRPFCCFRTSPIDTLGRSFLP*VSKMLC
Trigger: GCACAGCATCTTGGACACTCATGGCAGGAAGGAGCG...GCCCAGTGTGTCAATAGGAGAGGTCCTAAAGCAACAAAAAGGGCGGGGTGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp TCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGCATCACCTCCATCTCTaGCTCGGGCATCCAGAACGC +
Preference number: 4 (lower is better)
Translates to: SAALHLDKGYSPLRTNTRHHLHL*LGHPER
Trigger: GCGTTCTGGATGCCCGAGTCAGAGATGGAGGTGATG...CCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp AGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTGGGAATTCTTTCCATCACCAGTaGAATTACACTTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: RDADQPATPGNAVGLSGNSFHHQ*NYTWSL
Trigger: CAGTGACCAAGTGTAATTTCACTGGTGATGGAAAGA...ATTCCCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp AAGACACCCCGCCCTTTTTGTTGCTTTAGGACCTCTCCTATTGACACACTGGGCCTCTCGGATCTCCGCTaGAGCCCCCTTCGAACACTT +
Preference number: 4 (lower is better)
Translates to: KTPRPFCCFRTSPIDTLGLSDLR*SPLRTL
Trigger: AAGTGTTCGAAGGGGGCTGCAGCGGAGATCCGAGAG...GCCCAGTGTGTCAATAGGAGAGGTCCTAAAGCAACAAAAAGGGCGGGGTGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp GTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCATTCTTCATACCTCCACTCCTCGTCCTCTaGCCCATCCCCCTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: VRFRATYKKGPRLSFFIPPLLVL*PIPLLS
Trigger: CGAGAGCAGGGGGATGGGGCAGAGGACGAGGAGTGG...AGGTATGAAGAATGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR GCA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTCTCTACAAACAAAGCTaGTATCCAGGGCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSLYKQS*YPGPGS
Trigger: TGACCCTGGCCCTGGATAGCAGCTTTGTTTGTAGAG...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACCAGAACGCCACTGTGTaGTCGGGGGTGAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYQNATV*SGVRLS
Trigger: AGAGAGCCTCACCCCCGACCACACAGTGGCGTTCTG...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp AAGACACCCCGCCCTTTTTGTTGCTTTAGGACCTCTCCTATTGACACACTGGGCGCCTGGGAACGCTGTTaGCCTCTCTGGGAATGGCAT +
Preference number: 4 (lower is better)
Translates to: KTPRPFCCFRTSPIDTLGAWERC*PLWEWH
Trigger: ATGCCATTCCCAGAGAGGCCAACAGCGTTCCCAGGC...GCCCAGTGTGTCAATAGGAGAGGTCCTAAAGCAACAAAAAGGGCGGGGTGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGGCCTGGGAACGCTGTTaGCCTCTCTGGGAATGGCAT +
Preference number: 4 (lower is better)
Translates to: SAALHLDKGYSPLRTNTRAWERC*PLWEWH
Trigger: ATGCCATTCCCAGAGAGGCCAACAGCGTTCCCAGGC...CCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp AGGCCTGTAATCCCAGCTACTTGGGATTACAGTAATCCTCCTGCTGAGGCAGGATTACGGCGATGGATGTaGCTGGGCCGGATATACAGC +
Preference number: 4 (lower is better)
Translates to: RPVIPATWDYSNPPAEAGLRRWM*LGRIYS
Trigger: GCTGTATATCCGGCCCAGTCACATCCATCGCCGTAA...TCCTGCCTCAGCAGGAGGATTACTGTAATCCCAAGTAGCTGGGATTACAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp AAGGGTCATCATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCGAAAGCAGGAAACAATaGGAACGGAGGAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KGHHVMSRKARLTCREGPESRKQ*ERRKSP
Trigger: GGGGCTCTTCCTCCGTTCTCATTGTTTCCTGCTTTC...GGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATGATGACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp GCCCTGATTCAAAGCATGGTTCTGCGGACTGCCTGGGCACCCTGGGCAAGTTTCAAAAGGCAGTGTTCATaGGCCAAGAGAAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: ALIQSMVLRTAWAPWASFKRQCS*AKRNGF
Trigger: GAAGCCATTTCTCTTGGCTCATGAACACTGCCTTTT...GAAACTTGCCCAGGGTGCCCAGGCAGTCCGCAGAACCATGCTTTGAATCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp TCTTTTCCCAAGTCAAGCAAGATCCACATGCCACCAAGTCCTGACGACATGGAGTCCCTCAGGCTGGTCTaGAAGAATCGCCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SFPKSSKIHMPPSPDDMESLRLV*KNRPRA
Trigger: AGCTCTGGGGCGATTCTTTCAGACCAGCCTGAGGGA...CTCCATGTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTGACTTGGGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp GAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCAATTTCCCATATGAATaGAGCTCAGAGGATTTGCTT +
Preference number: 4 (lower is better)
Translates to: ESERCGPASHAWERCWPLNFPYE*SSEDLL
Trigger: AAGCAAATCCTCTGAGCTTCATTCATATGGGAAATT...GAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp GACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTCAAGAAAAGCCTGGCTaGCATGGTGAAACCCCGTCT +
Preference number: 4 (lower is better)
Translates to: DKGYSPLRTNTRSSYSQAQEKPG*HGETPS
Trigger: AGACGGGGTTTCACCATGTCAGCCAGGCTTTTCTTG...AGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp GCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTCTCTCCAGCTCCAGAGAGTAGCGCTCCTTCCTaGCATGAGTGTCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: AMGKNQVRLGRLFSPAPESSAPS*HECPRC
Trigger: GCATCTTGGACACTCATGGCAGGAAGGAGCGCTACT...CTCTGGAGCTGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp ATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTTGTCTGTCCAGGATaGCCCTGTCTTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: IFPTPHQYQVQLLSGCPRVVCPG*PCLSIT
Trigger: GGTGATGGAAAGACAGGGGCATCCTGGACAGACAAC...CCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp TTTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTCTGCCCCATCCCCCTaGTCTCGGATCTCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: FSRACSKSIPRWLWGRTRSAPSP*SRISAA
Trigger: TGCAGCGGAGATCCGAGAGCAGGGGGATGGGGCAGA...CCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp CTTCAATTCCAGGTCTCTTCACAGATCTGGGTGTGGGTATACTACCCAAAAGGCAGTGAGTCTGAGAGATaGGGACCAGCCAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: LQFQVSSQIWVWVYYPKGSESER*GPASHA
Trigger: GGCGTGGCTGGCTGGTCCGCATCTCTCAGACTCACT...GCCTTTTGGGTAGTATACCCACACCCAGATCTGTGAAGAGACCTGGAATTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCCCCCGCCCTTTTTGTTaGTTTAGGACCTCTCCTATT +
Preference number: 4 (lower is better)
Translates to: HVMSRKARLTCREGPSLSPRPFC*FRTSPI
Trigger: AATAGGAGAGGTCCTAAAGCAACAAAAAGGGCGGGG...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTCCATGCAGATGCCTATaGCACAGCAGCTTCCTATTT +
Preference number: 4 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSPCRCL*HSSFLF
Trigger: AAATAGGAAGCTGCTGTGGCATAGGCATCTGCATGG...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp ACCCTCTCTTTTCCCAAGTCAAGCAAGATCCACATGCCACCAAGTCCTGACGACGCAGGGTTTCAGCCCTaGTGTAGTTCCTCAACTCCC +
Preference number: 4 (lower is better)
Translates to: TLSFPKSSKIHMPPSPDDAGFQP*CSSSTP
Trigger: GGGAGTTGAGGAACTACAGCAGGGCTGAAACCCTGC...GTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTGACTTGGGAAAAGAGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp TCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTCTCTCCACAGGGCATGAGTCTGTaGAAAAGCAGCGCGGCAAGT +
Preference number: 4 (lower is better)
Translates to: SKVAMGKNQVRLGRLFSPQGMSL*KSSAAS
Trigger: ACTTGCCGCGCTGCTTTTGCACAGACTCATGCCCTG...TGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460685.1
CDS-3UTR CCA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCTGTCAGTGTCCCCCTTaGCTTCCACCTTGTAGGACG +
Preference number: 4 (lower is better)
Translates to: SGCLICTGPWNHTALIQSCQCPP*LPPCRT
Trigger: CGTCCTACAAGGTGGAAGCCAAGGGGGACACTGACA...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp GCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGCAGCGCGAGCAGCTCTaGCTTGTTGACCAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: AELVQRVFQGGYGEEPGKQREQL*LVDQPL
Trigger: AAGGGGCTGGTCAACAAGCCAGAGCTGCTCGCGCTG...CTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp CTTTGGGGAATAGTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCACAGAACGCCACTGTGTaGTCGGGGGTGAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LWGIVRFRATYKKGPRLSQNATV*SGVRLS
Trigger: AGAGAGCCTCACCCCCGACCACACAGTGGCGTTCTG...TGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAACTATTCCCCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CCA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTCCCTTCGAACACTTTTaGGCCATGATGTTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSPFEHF*AMMLSV
Trigger: GACAGACAACATCATGGCCCAAAAGTGTTCGAAGGG...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCCTCAAAACTGTAGCCTaGCAGAGTGAGTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: HVMSRKARLTCREGPSLSLKTVA*QSESER
Trigger: TCTCTCAGACTCACTCTGCCAGGCTACAGTTTTGAG...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp GAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCCTCAGAGGATTTGCTTaGTTCTGTTTGAAGATACAA +
Preference number: 4 (lower is better)
Translates to: ESERCGPASHAWERCWPLLRGFA*FCLKIQ
Trigger: TTGTATCTTCAAACAGAACCAAGCAAATCCTCTGAG...GAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp AAGACACCCCGCCCTTTTTGTTGCTTTAGGACCTCTCCTATTGACACACTGGGCGGGTCTTACCCAGGTTaGAGTGCAGTGGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: KTPRPFCCFRTSPIDTLGGSYPG*SAVAQS
Trigger: TGACTGTGCCACTGCACTCCAACCTGGGTAAGACCC...GCCCAGTGTGTCAATAGGAGAGGTCCTAAAGCAACAAAAAGGGCGGGGTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TTTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGCTTCGGAGACCTGTCTaGGGGTCGGGACCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FSRACSKSIPRWLWGRTRLRRPV*GSGPSL
Trigger: GAGAGAGGGTCCCGACCCCCAGACAGGTCTCCGAAG...CCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460685.1
3UTR CAA 72 bp CACCCCGCCCTTTTTGTTGCTTTAGGACCTCTCCTATaGACACACTGGGCCTCCTTGTTTGGAATGGTGACC +
Preference number: 4 (lower is better)
Translates to: HPALFVALGPLL*THWASLFGMVT
Trigger: GGTCACCATTCCAAACAAGGAGGCCCAGTGTGTCAATAGGAGAGGTCCTAAAGCAACAAAAAGGGCGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp ATAGTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCATTCTTCATACTGTGTGGTCGGGGGTaGGGCTCTCTGTCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: IVRFRATYKKGPRLSFFILCGRG*GSLSAR
Trigger: TCGCGCTGACAGAGAGCCTCACCCCCGACCACACAG...TATGAAGAATGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR TCA 90 bp CTTTGGGGAATAGTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCACATCACCTCCATCTCTaGCTCGGGCATCCAGAACGC +
Preference number: 4 (lower is better)
Translates to: LWGIVRFRATYKKGPRLSHHLHL*LGHPER
Trigger: GCGTTCTGGATGCCCGAGTCAGAGATGGAGGTGATG...TGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAACTATTCCCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR TCA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCTTTCCAAGACCTTTCTaGAGGGCAAGGAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SGCLICTGPWNHTALIQSFPRPF*RARKQG
Trigger: CCCCTGCTTCCTTGCCCTTCAGAAAGGTCTTGGAAA...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp ACTTCTCTCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAAGGCAGGAGAAACTCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TSLSCSAFRQGIFPTPHQGRRNS*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGAGTTTCTCCTGCC...TTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGAGAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp TCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTCTCTCCAGTTGTCTGTCCAGGATaGCCCTGTCTTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: SKVAMGKNQVRLGRLFSPVVCPG*PCLSIT
Trigger: GGTGATGGAAAGACAGGGGCATCCTGGACAGACAAC...TGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCAGAAATGTTCCACAATaGTACAGAAGGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: HVMSRKARLTCREGPSLSRNVPQ*YRRCWC
Trigger: GCACCAGCACCTTCTGTAGCATTGTGGAACATTTCT...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCCTAACTTCTCTCAGCTaGTCTGCATTTAGACAAGGG +
Preference number: 4 (lower is better)
Translates to: HVMSRKARLTCREGPSLSLTSLS*SAFRQG
Trigger: CCCTTGTCTAAATGCAGAGCAGCTGAGAGAAGTTAG...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp ATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGTCTTTCCATCTCCCCTaGCACTGCTATAGACCAGAC +
Preference number: 4 (lower is better)
Translates to: IFPTPHQYQVQLLSGCPRSFHLP*HCYRPD
Trigger: GTCTGGTCTATAGCAGTGGCAGGGGAGATGGAAAGA...CCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp GCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTCTCTCCAGCTCCAGAGTTCAAGAAATTCTCATaGCTCAGCCTCCCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: AMGKNQVRLGRLFSPAPEFKKFS*LSLPRR
Trigger: GCGCCTTGGGAGGCTGAGGCATGAGAATTTCTTGAA...CTCTGGAGCTGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp TCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTCTCTCCAATCTGCCCATGCAGATaGCTATGCCACAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SKVAMGKNQVRLGRLFSPICPCR*LCHSSF
Trigger: GAAGCTGCTGTGGCATAGGCATCTGCATGGGCAGAT...TGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp AGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTGGGAATAGGAACATACATTTCTaGCAGAGTATCTTCAGAACA +
Preference number: 4 (lower is better)
Translates to: RDADQPATPGNAVGLSGNRNIHF*QSIFRT
Trigger: TGTTCTGAAGATACTCTGGCAGAAATGTATGTTCCT...ATTCCCAGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp AAGGGTCATCATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCGAGGGAGTAAAGAACTaGCAACTCAAGGTAGGGGGA +
Preference number: 4 (lower is better)
Translates to: KGHHVMSRKARLTCREGPEGVKN*QLKVGG
Trigger: TCCCCCTACCTTGAGTTGCCAGTTCTTTACTCCCTC...GGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATGATGACCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp AAGACACCCCGCCCTTTTTGTTGCTTTAGGACCTCTCCTATTGACACACTGGGCGAAGATCCCTCAGGCTaGTCTGAAAGAATCGCCCCA +
Preference number: 4 (lower is better)
Translates to: KTPRPFCCFRTSPIDTLGEDPSG*SERIAP
Trigger: TGGGGCGATTCTTTCAGACCAGCCTGAGGGATCTTC...GCCCAGTGTGTCAATAGGAGAGGTCCTAAAGCAACAAAAAGGGCGGGGTGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp AAAGGGACCTCCCTCCAAGAAAAGAGTCCAGGCAAGGCAATGCAAGTGGGGGAGCCTATTAACAACCTGTaGAAGATCCCTCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KGTSLQEKSPGKAMQVGEPINNL*KIPQAG
Trigger: ACCAGCCTGAGGGATCTTCCACAGGTTGTTAATAGG...CTCCCCCACTTGCATTGCCTTGCCTGGACTCTTTTCTTGGAGGGAGGTCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp CACAAAGTATGTACAGGGACAACCCACTTTGCTCAAGATTGGAGGCAAATACACGGGAGTGACCTGCTCTaGGAACAGCCAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HKVCTGTTHFAQDWRQIHGSDLL*EQPAPP
Trigger: TGGAGGGGCTGGCTGTTCCCAGAGCAGGTCACTCCC...GTGTATTTGCCTCCAATCTTGAGCAAAGTGGGTTGTCCCTGTACATACTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TCTTTTCCCAAGTCAAGCAAGATCCACATGCCACCAAGTCCTGACGACATGGAGAAAACTAGCCGGGCGTaGTGGCGTGTGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: SFPKSSKIHMPPSPDDMEKTSRA*WRVPVI
Trigger: GATTACAGGCACACGCCACCACGCCCGGCTAGTTTT...CTCCATGTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTGACTTGGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp AAAGGGACCTCCCTCCAAGAAAAGAGTCCAGGCAAGGCAATGCAAGTGGGGGAGCACTTGGACAGTGCATaGCACATAACTGAGTACCAC +
Preference number: 4 (lower is better)
Translates to: KGTSLQEKSPGKAMQVGEHLDSA*HITEYH
Trigger: GTGGTACTCAGTTATGTGCCATGCACTGTCCAAGTG...CTCCCCCACTTGCATTGCCTTGCCTGGACTCTTTTCTTGGAGGGAGGTCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp GCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGTTACGGCGATGGATGTaGCTGGGCCGGATATACAGC +
Preference number: 4 (lower is better)
Translates to: AELVQRVFQGGYGEEPGKLRRWM*LGRIYS
Trigger: GCTGTATATCCGGCCCAGTCACATCCATCGCCGTAA...CTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp ATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTGTCCAAGATGCTGTaGCGAGATACATCGATCAGT +
Preference number: 4 (lower is better)
Translates to: IFPTPHQYQVQLLSGCPRVSKML*RDTSIS
Trigger: ACTGATCGATGTATCTCGGCACAGCATCTTGGACAC...CCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp TTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTCAATGCTACAGAAGGTaGTGGTGCCCCCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LAELVQRVFQGGYGEEPGQCYRR*WCPQRQ
Trigger: CTGCCTCTGGGGGCACCAGCACCTTCTGTAGCATTG...ACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp CTTCAATTCCAGGTCTCTTCACAGATCTGGGTGTGGGTATACTACCCAAAAGGCTGCGTGAGGATGCCATaGCCAATCTCCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: LQFQVSSQIWVWVYYPKGCVRMP*PISSLI
Trigger: GATGAGGCTGGAGATTGGGCATGGCATCCTCACGCA...GCCTTTTGGGTAGTATACCCACACCCAGATCTGTGAAGAGACCTGGAATTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp GAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTGTCCAGGCAAGGCAATaGAAGTGGGGGAGTGACCTG +
Preference number: 4 (lower is better)
Translates to: ELVQRVFQGGYGEEPGKTVQARQ*KWGSDL
Trigger: CAGGTCACTCCCCCACTTGCATTGCCTTGCCTGGAC...AGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp GCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACAATCTTGGCTCACTaGAACCTCCGTCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: AELVQRVFQGGYGEEPGKTILAH*NLRLPG
Trigger: ACCCGGGAGACGGAGGTTGCAGTGAGCCAAGATTGT...CTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp GACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTAAGAGTATTCCAAGGTaGCTATGGGGAAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: DKGYSPLRTNTRSSYSQAKSIPR*LWGRTR
Trigger: CCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTT...AGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp GCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGCGCTGTTGGCCTCTCTaGGAATGGCATCTACCAGGA +
Preference number: 4 (lower is better)
Translates to: AELVQRVFQGGYGEEPGKRCWPL*EWHLPG
Trigger: TCCTGGTAGATGCCATTCCCAGAGAGGCCAACAGCG...CTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp TCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACGCTGTTGGCCTCTCTaGGAATGGCATCTACCAGGA +
Preference number: 4 (lower is better)
Translates to: SAFRQGIFPTPHQYQVQLRCWPL*EWHLPG
Trigger: TCCTGGTAGATGCCATTCCCAGAGAGGCCAACAGCG...TAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp TCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGCTGGGCCTCCTTGTTTaGAATGGTGACCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: SAALHLDKGYSPLRTNTRLGLLV*NGDLSI
Trigger: TATGGACAGGTCACCATTCCAAACAAGGAGGCCCAG...CCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp AGGCCTGTAATCCCAGCTACTTGGGATTACAGTAATCCTCCTGCTGAGGCAGGATCTTCTCACTCTCCATaGGATCACTGGCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RPVIPATWDYSNPPAEAGSSHSP*DHWLPG
Trigger: TCCTGGAAGCCAGTGATCCCATGGAGAGTGAGAAGA...TCCTGCCTCAGCAGGAGGATTACTGTAATCCCAAGTAGCTGGGATTACAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TTTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGGCAAGGCAATGCAAGTaGGGGAGTGACCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FSRACSKSIPRWLWGRTRARQCK*GSDLLW
Trigger: CCAGAGCAGGTCACTCCCCCACTTGCATTGCCTTGC...CCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp GGAAGGTACAAGGGACACGGAGGCTTGAAGCAGGATAGTACAGGCTACAACACAATCTGTACAGGACCCTaGAACCACACTGCCCTGATT +
Preference number: 4 (lower is better)
Translates to: GRYKGHGGLKQDSTGYNTICTGP*NHTALI
Trigger: AATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGAT...TGTGTTGTAGCCTGTACTATCCTGCTTCAAGCCTCCGTGTCCCTTGTACCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp TCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTCTCTCCAAACACTTTTGGGCCATaGTGTTGTCTGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SKVAMGKNQVRLGRLFSPNTFGP*CCLSRM
Trigger: CATCCTGGACAGACAACATCATGGCCCAAAAGTGTT...TGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp CTTCAATTCCAGGTCTCTTCACAGATCTGGGTGTGGGTATACTACCCAAAAGGCGACACAGAACACCAGTaGAGTGGCTACCACATCCTC +
Preference number: 4 (lower is better)
Translates to: LQFQVSSQIWVWVYYPKGDTEHQ*SGYHIL
Trigger: GAGGATGTGGTAGCCACTTCACTGGTGTTCTGTGTC...GCCTTTTGGGTAGTATACCCACACCCAGATCTGTGAAGAGACCTGGAATTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp AGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTAGCATGGCCTGCCTGTaGGAAAGTCCCATTCAGACA +
Preference number: 4 (lower is better)
Translates to: RVFQGGYGEEPGKTWQTVSMACL*ESPIQT
Trigger: TGTCTGAATGGGACTTTCTCACAGGCAGGCCATGCT...AACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp TCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTATCTAAAGACACTGGGTaGCTCTACCCCCAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SAFRQGIFPTPHQYQVQLSKDTG*LYPQSV
Trigger: CACTGACTGGGGGTAGAGTCACCCAGTGTCTTTAGA...TAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp AAAGGGACCTCCCTCCAAGAAAAGAGTCCAGGCAAGGCAATGCAAGTGGGGGAGTATGAATCATGTATCTaGTGGAATGGCAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: KGTSLQEKSPGKAMQVGEYESCI*WNGRVR
Trigger: CCTGACTCTGCCATTCCATCAGATACATGATTCATA...CTCCCCCACTTGCATTGCCTTGCCTGGACTCTTTTCTTGGAGGGAGGTCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp CTTTGGGGAATAGTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCAGTTGTCTGTCCAGGATaGCCCTGTCTTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: LWGIVRFRATYKKGPRLSVVCPG*PCLSIT
Trigger: GGTGATGGAAAGACAGGGGCATCCTGGACAGACAAC...TGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAACTATTCCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR GCA 90 bp TCTTTTCCCAAGTCAAGCAAGATCCACATGCCACCAAGTCCTGACGACATGGAGCTCTACAAACAAAGCTaGTATCCAGGGCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SFPKSSKIHMPPSPDDMELYKQS*YPGPGS
Trigger: TGACCCTGGCCCTGGATAGCAGCTTTGTTTGTAGAG...CTCCATGTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTGACTTGGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp AAGGGTCATCATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCCTAACTTCTCTCAGCTaGTCTGCATTTAGACAAGGG +
Preference number: 4 (lower is better)
Translates to: KGHHVMSRKARLTCREGPLTSLS*SAFRQG
Trigger: CCCTTGTCTAAATGCAGAGCAGCTGAGAGAAGTTAG...GGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATGATGACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp AAGGGTCATCATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCAGCTGTCCCATGAAATaGTCCTCACAAAAACGGGTT +
Preference number: 4 (lower is better)
Translates to: KGHHVMSRKARLTCREGPSCPMK*SSQKRV
Trigger: AACCCGTTTTTGTGAGGAGCATTTCATGGGACAGCT...GGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATGATGACCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp TTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTCTCAGTCTCCCGAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LAELVQRVFQGGYGEEPGLSLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTCGGGAGACTGAG...ACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTTACCCAGGTTGGAGTaGAGTGGCACAGTCATACCT +
Preference number: 4 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYLPRLE*SGTVIP
Trigger: AGGTATGACTGTGCCACTGCACTCCAACCTGGGTAA...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp GACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTCGATTTCATTTCCCTTaGCGTCGAATTTACGGCGAT +
Preference number: 4 (lower is better)
Translates to: DKGYSPLRTNTRSSYSQARFHFP*RRIYGD
Trigger: ATCGCCGTAAATTCGACGCCAAGGGAAATGAAATCG...AGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp ACCCTCTCTTTTCCCAAGTCAAGCAAGATCCACATGCCACCAAGTCCTGACGACGTCTCTTCACAGATCTaGGTGTGGGTATACTACCCA +
Preference number: 4 (lower is better)
Translates to: TLSFPKSSKIHMPPSPDDVSSQI*VWVYYP
Trigger: TGGGTAGTATACCCACACCCAGATCTGTGAAGAGAC...GTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTGACTTGGGAAAAGAGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp CTTCAATTCCAGGTCTCTTCACAGATCTGGGTGTGGGTATACTACCCAAAAGGCCCACATTGGCCAGTCTaGTCTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LQFQVSSQIWVWVYYPKGPHWPV*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAGACTGGCCAATGTGG...GCCTTTTGGGTAGTATACCCACACCCAGATCTGTGAAGAGACCTGGAATTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
3UTR CAA 72 bp GCTTTAGGACCTCTCCTATTGACACACTGGGCCTCCTaGTTTGGAATGGTGACCTGTCCATATAAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: ALGPLLLTHWAS*FGMVTCPYKCA
Trigger: GGCACACTTATATGGACAGGTCACCATTCCAAACAAGGAGGCCCAGTGTGTCAATAGGAGAGGTCCTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTGGCATGGGAACATTTaGGGGAGTAAAGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYWHGNI*GSKELA
Trigger: TGCCAGTTCTTTACTCCCTCAAATGTTCCCATGCCA...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACCCTCATGGACTGTTGTaGGAAGTACGATATCGCAAG +
Preference number: 4 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYPHGLL*EVRYRK
Trigger: CTTGCGATATCGTACTTCTCACAACAGTCCATGAGG...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp ATTCCAGGTCTCTTCACAGATCTGGGTGTGGGTATACTACCCAAAAGGCAGTGTCCCAATTCCTTAACATaGGTGAGGATGCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: IPGLFTDLGVGILPKRQCPNSLT*VRMPCP
Trigger: TGGGCATGGCATCCTCACGCATGTTAAGGAATTGGG...ACACTGCCTTTTGGGTAGTATACCCACACCCAGATCTGTGAAGAGACCTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp CACAAAGTATGTACAGGGACAACCCACTTTGCTCAAGATTGGAGGCAAATACACCTAGCTTCCAAAAGCTaGCCCTACCAGCCACATGGG +
Preference number: 4 (lower is better)
Translates to: HKVCTGTTHFAQDWRQIHLASKS*PYQPHG
Trigger: CCCATGTGGCTGGTAGGGGCAGCTTTTGGAAGCTAG...GTGTATTTGCCTCCAATCTTGAGCAAAGTGGGTTGTCCCTGTACATACTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp CTTTGGGGAATAGTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCAGCCAGGAGATACAACTaGACCAACACCAGGTACCTA +
Preference number: 4 (lower is better)
Translates to: LWGIVRFRATYKKGPRLSARRYN*TNTRYL
Trigger: TAGGTACCTGGTGTTGGTGCAGTTGTATCTCCTGGC...TGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAACTATTCCCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CCA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACCCCTTCGAACACTTTTaGGCCATGATGTTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYPFEHF*AMMLSV
Trigger: GACAGACAACATCATGGCCCAAAAGTGTTCGAAGGG...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp GGGAATCTTTGGGGAATAGTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGCCCTTCGAACACTTTTaGGCCATGATGTTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GNLWGIVRFRATYKKGPRPFEHF*AMMLSV
Trigger: GACAGACAACATCATGGCCCAAAAGTGTTCGAAGGG...CCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAACTATTCCCCAAAGATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CCA 90 bp CTTCAATTCCAGGTCTCTTCACAGATCTGGGTGTGGGTATACTACCCAAAAGGCGAACCAGGTAAGACTTaGCAGACTGTTCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQFQVSSQIWVWVYYPKGEPGKT*QTVLSS
Trigger: GCTGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTC...GCCTTTTGGGTAGTATACCCACACCCAGATCTGTGAAGAGACCTGGAATTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTAGAACCAGGTAAGACTTaGCAGACTGTTCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SAFRQGIFPTPHQYQVQLEPGKT*QTVLSS
Trigger: GCTGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTC...TAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp TCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTAGAGGGAGTAAAGAACTaGCAACTCAAGGTAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SAFRQGIFPTPHQYQVQLEGVKN*QLKVGG
Trigger: TCCCCCTACCTTGAGTTGCCAGTTCTTTACTCCCTC...TAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CCA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACCACTCACCCAGAATCTaGGCATCATTCTTGATCCCT +
Preference number: 4 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYHSPRI*ASFLIP
Trigger: AGGGATCAAGAATGATGCCCAGATTCTGGGTGAGTG...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCCACTTTGCTCAAGATTaGAGGCAAATACACCAAAAT +
Preference number: 4 (lower is better)
Translates to: HVMSRKARLTCREGPSLSHFAQD*RQIHQN
Trigger: ATTTTGGTGTATTTGCCTCCAATCTTGAGCAAAGTG...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp TTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTCTCAAGTTTGGCCAATaGATCCAGGAAGGGACCATC +
Preference number: 4 (lower is better)
Translates to: LAELVQRVFQGGYGEEPGLKFGQ*IQEGTI
Trigger: GATGGTCCCTTCCTGGATTCATTGGCCAAACTTGAG...ACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp GTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCATTCTTCATACCTCTCAAGTTTGGCCAATaGATCCAGGAAGGGACCATC +
Preference number: 4 (lower is better)
Translates to: VRFRATYKKGPRLSFFIPLKFGQ*IQEGTI
Trigger: GATGGTCCCTTCCTGGATTCATTGGCCAAACTTGAG...AGGTATGAAGAATGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR TCA 90 bp TCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTAAACACTTTTGGGCCATaGTGTTGTCTGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SAFRQGIFPTPHQYQVQLNTFGP*CCLSRM
Trigger: CATCCTGGACAGACAACATCATGGCCCAAAAGTGTT...TAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp TTTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGCATGCCACCAAGTCCTaGCGACATGGAGACTTCAAT +
Preference number: 4 (lower is better)
Translates to: FSRACSKSIPRWLWGRTRHATKS*RHGDFN
Trigger: ATTGAAGTCTCCATGTCGTCAGGACTTGGTGGCATG...CCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp CATTCTTCATACCTTAGAGGAATTCTCCTGATGCTAACACATTCCCAGGTGTTTCTCTCGGATCTCCGCTaGAGCCCCCTTCGAACACTT +
Preference number: 4 (lower is better)
Translates to: HSSYLRGILLMLTHSQVFLSDLR*SPLRTL
Trigger: AAGTGTTCGAAGGGGGCTGCAGCGGAGATCCGAGAG...AAACACCTGGGAATGTGTTAGCATCAGGAGAATTCCTCTAAGGTATGAAGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR GCA 90 bp GACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGAAGCTCAGAGGATTTaGTTGGTTCTGTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: DKGYSPLRTNTRSSYSQAEAQRI*LVLFED
Trigger: ATCTTCAAACAGAACCAAGCAAATCCTCTGAGCTTC...AGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp ATTCCAGGTCTCTTCACAGATCTGGGTGTGGGTATACTACCCAAAAGGCAGTGTTTCAAACAATTCTCCTaGTTCAGCCTCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: IPGLFTDLGVGILPKRQCFKQFS*FSLPSS
Trigger: GCTACTGGGGAGGCTGAAGCAGGAGAATTGTTTGAA...ACACTGCCTTTTGGGTAGTATACCCACACCCAGATCTGTGAAGAGACCTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp GAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTGGAAGCAGGGGACAGTaGAAGGAACATAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: ELVQRVFQGGYGEEPGKTGSRGQ*KEHKVC
Trigger: GCAAACCTTATGTTCCTTCCACTGTCCCCTGCTTCC...AGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp ATTCCAGGTCTCTTCACAGATCTGGGTGTGGGTATACTACCCAAAAGGCAGTGTGTGTGCCATACCCTTTaGACACAGTGCTTTAGACAG +
Preference number: 4 (lower is better)
Translates to: IPGLFTDLGVGILPKRQCVCHTL*TQCFRQ
Trigger: CTGTCTAAAGCACTGTGTCCAAAGGGTATGGCACAC...ACACTGCCTTTTGGGTAGTATACCCACACCCAGATCTGTGAAGAGACCTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp AAGATAACACTCCCCATCTCCCCAGTAGATAAATGGACGAAAGAACGAATAACAAGCCTCCCAAGGCGCTaGAACTACAGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: KITLPISPVDKWTKERITSLPRR*NYRHVP
Trigger: TGGCACATGCCTGTAGTTCCAGCGCCTTGGGAGGCT...TGTTATTCGTTCTTTCGTCCATTTATCTACTGGGGAGATGGGGAGTGTTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp TTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTTGGCATGGGAACATTTaGGGGAGTAAAGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: LAELVQRVFQGGYGEEPGWHGNI*GSKELA
Trigger: TGCCAGTTCTTTACTCCCTCAAATGTTCCCATGCCA...ACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp AAGATAACACTCCCCATCTCCCCAGTAGATAAATGGACGAAAGAACGAATAACATGGTCTTTCCCTTCCTaGAGCCCATCCAAGACACCC +
Preference number: 4 (lower is better)
Translates to: KITLPISPVDKWTKERITWSFPS*SPSKTP
Trigger: GGGTGTCTTGGATGGGCTTCAGGAAGGGAAAGACCA...TGTTATTCGTTCTTTCGTCCATTTATCTACTGGGGAGATGGGGAGTGTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp GAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTTGCTCGGCAGTCAAGTaGCCTTTGAAACACAGATCA +
Preference number: 4 (lower is better)
Translates to: ELVQRVFQGGYGEEPGKTCSAVK*PLKHRS
Trigger: TGATCTGTGTTTCAAAGGTCACTTGACTGCCGAGCA...AGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR TCA 90 bp ACTTCTCTCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAACAAAAACGGGTTCTCTaGCCAAAGAAATGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: TSLSCSAFRQGIFPTPHQQKRVL*PKKCGK
Trigger: TTTCCCACATTTCTTTGGTCAGAGAACCCGTTTTTG...TTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGAGAGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp TTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTGTGTCCAAGATGCTGTaGCGAGATACATCGATCAGT +
Preference number: 4 (lower is better)
Translates to: LAELVQRVFQGGYGEEPGVSKML*RDTSIS
Trigger: ACTGATCGATGTATCTCGGCACAGCATCTTGGACAC...ACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp GTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCATTCTTCATACCTTATGTACCATGCTCCTaGCAGGAGATACAACTGCAC +
Preference number: 4 (lower is better)
Translates to: VRFRATYKKGPRLSFFIPYVPCS*QEIQLH
Trigger: GTGCAGTTGTATCTCCTGGCAGGAGCATGGTACATA...AGGTATGAAGAATGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CCA 90 bp TTTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTCACAGATCTGGGTGTaGGTATACTACCCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: FSRACSKSIPRWLWGRTRSQIWV*VYYPKG
Trigger: GCCTTTTGGGTAGTATACCCACACCCAGATCTGTGA...CCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TTTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGCTCCTATTGACACACTaGGCCTCCTTGTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: FSRACSKSIPRWLWGRTRLLLTH*ASLFGM
Trigger: CATTCCAAACAAGGAGGCCCAGTGTGTCAATAGGAG...CCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGGACTATGCAGCAATATaGAAAGTGATTATGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SAALHLDKGYSPLRTNTRDYAAI*KVIMCG
Trigger: CCCACACATAATCACTTTCCATATTGCTGCATAGTC...CCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp TCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTCTCTCCAGTTCTGCCGTTTCTATaGTTCAACGCTTTTATAGGT +
Preference number: 4 (lower is better)
Translates to: SKVAMGKNQVRLGRLFSPVLPFL*FNAFIG
Trigger: ACCTATAAAAGCGTTGAACCATAGAAACGGCAGAAC...TGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460685.1
CDS-3UTR TCA 90 bp GCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGTCTTTCCATCACCAGTaGAATTACACTTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: AELVQRVFQGGYGEEPGKSFHHQ*NYTWSL
Trigger: CAGTGACCAAGTGTAATTTCACTGGTGATGGAAAGA...CTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR TCA 90 bp CTTTGGGGAATAGTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCATCTTTCCATCACCAGTaGAATTACACTTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LWGIVRFRATYKKGPRLSSFHHQ*NYTWSL
Trigger: CAGTGACCAAGTGTAATTTCACTGGTGATGGAAAGA...TGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAACTATTCCCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR TCA 90 bp ACTTCTCTCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAACCCCTACATTGCTGGTaGAATTATGGTTTAGAACAA +
Preference number: 4 (lower is better)
Translates to: TSLSCSAFRQGIFPTPHQPLHCW*NYGLEQ
Trigger: TTGTTCTAAACCATAATTTCACCAGCAATGTAGGGG...TTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGAGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp TTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAGAAATGTTCCACAATaGTACAGAAGGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LAELVQRVFQGGYGEEPGRNVPQ*YRRCWC
Trigger: GCACCAGCACCTTCTGTAGCATTGTGGAACATTTCT...ACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR GCA 90 bp AGGCCTGTAATCCCAGCTACTTGGGATTACAGTAATCCTCCTGCTGAGGCAGGAGCTTTGAAATCTGAGTaGTTGGATGTAAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: RPVIPATWDYSNPPAEAGALKSE*LDVNSS
Trigger: AGAGGAATTTACATCCAAGCACTCAGATTTCAAAGC...TCCTGCCTCAGCAGGAGGATTACTGTAATCCCAAGTAGCTGGGATTACAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp ACTTCTCTCAGCTGCTCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAAAATATGTACTACTTTTaGAGCCAGAGTTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TSLSCSAFRQGIFPTPHQNMYYF*SQSSGV
Trigger: AACCCCAGAACTCTGGCTGCAAAAGTAGTACATATT...TTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGAGCAGCTGAGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp AGTTGTTCAACTGCCTCAGCATGGTTAATGTATTCACTTGAAGTAGAAATGTTTCAGCGCGAGCAGCTCTaGCTTGTTGACCAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SCSTASAWLMYSLEVEMFQREQL*LVDQPL
Trigger: AAGGGGCTGGTCAACAAGCCAGAGCTGCTCGCGCTG...AAACATTTCTACTTCAAGTGAATACATTAACCATGCTGAGGCAGTTGAACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CCA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCCTGACCAAAGAAATGTaGGAAATACGTAATCATACC +
Preference number: 4 (lower is better)
Translates to: SGCLICTGPWNHTALIQSLTKEM*EIRNHT
Trigger: GGTATGATTACGTATTTCCCACATTTCTTTGGTCAG...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp GTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCATTCTTCATACCTCTCCTTCCTACCACTTaGGAATCTTTGGGGAATAGT +
Preference number: 4 (lower is better)
Translates to: VRFRATYKKGPRLSFFIPLLPTT*ESLGNS
Trigger: ACTATTCCCCAAAGATTCCCAAGTGGTAGGAAGGAG...AGGTATGAAGAATGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR TCA 90 bp TTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTGCTGGGAAAGATTTATaGTACGGAAGTGTTCATGAC +
Preference number: 4 (lower is better)
Translates to: LAELVQRVFQGGYGEEPGAGKDL*YGSVHD
Trigger: GTCATGAACACTTCCGTATCATAAATCTTTCCCAGC...ACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp AAGATAACACTCCCCATCTCCCCAGTAGATAAATGGACGAAAGAACGAATAACACAAGCAAGATCCACATaGCACCAAGTCCTGACGACA +
Preference number: 4 (lower is better)
Translates to: KITLPISPVDKWTKERITQARST*HQVLTT
Trigger: TGTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTG...TGTTATTCGTTCTTTCGTCCATTTATCTACTGGGGAGATGGGGAGTGTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp TTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCATTCTTCATACCTTAACCAGTATGTACCATaGTCCTGCCAGGAGATACAA +
Preference number: 4 (lower is better)
Translates to: LGSEPPTRKVPGCHSSYLNQYVP*SCQEIQ
Trigger: TTGTATCTCCTGGCAGGAGCATGGTACATACTGGTT...AAGGTATGAAGAATGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR TCA 90 bp CATTCTTCATACCTTAGAGGAATTCTCCTGATGCTAACACATTCCCAGGTGTTTAACACTTTTGGGCCATaGTGTTGTCTGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: HSSYLRGILLMLTHSQVFNTFGP*CCLSRM
Trigger: CATCCTGGACAGACAACATCATGGCCCAAAAGTGTT...AAACACCTGGGAATGTGTTAGCATCAGGAGAATTCCTCTAAGGTATGAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR TCA 90 bp TCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACATTGTGATGAGCTCTaGGTTGTATTAAGGAATTTG +
Preference number: 4 (lower is better)
Translates to: SAFRQGIFPTPHQYQVQLHCDEL*VVLRNL
Trigger: CAAATTCCTTAATACAACTCAGAGCTCATCACAATG...TAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp AAGATAACACTCCCCATCTCCCCAGTAGATAAATGGACGAAAGAACGAATAACACATGAGTGTCCAAGATaGTGTGCCGAGATACATCGA +
Preference number: 4 (lower is better)
Translates to: KITLPISPVDKWTKERITHECPR*CAEIHR
Trigger: TCGATGTATCTCGGCACAGCATCTTGGACACTCATG...TGTTATTCGTTCTTTCGTCCATTTATCTACTGGGGAGATGGGGAGTGTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp GCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGTTTGAACTTTTCATCTaGGGAGTAATAGGATCCAGT +
Preference number: 4 (lower is better)
Translates to: AELVQRVFQGGYGEEPGKFELFI*GVIGSS
Trigger: ACTGGATCCTATTACTCCCCAGATGAAAAGTTCAAA...CTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp TCTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTATGGTTACAAAGACTATaGAGCAATATGGAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SAFRQGIFPTPHQYQVQLWLQRL*SNMESD
Trigger: ATCACTTTCCATATTGCTGCATAGTCTTTGTAACCA...TAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CCA 90 bp AAGATAACACTCCCCATCTCCCCAGTAGATAAATGGACGAAAGAACGAATAACAATAATCAGTACCTCATaGACTGTTGTGAGAAGTACG +
Preference number: 4 (lower is better)
Translates to: KITLPISPVDKWTKERITIISTS*TVVRST
Trigger: CGTACTTCTCACAACAGTCCATGAGGTACTGATTAT...TGTTATTCGTTCTTTCGTCCATTTATCTACTGGGGAGATGGGGAGTGTTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR GCA 90 bp CATTCTTCATACCTTAGAGGAATTCTCCTGATGCTAACACATTCCCAGGTGTTTATTCAGTTGTTCAACTaGCTCAGCATGGTTAATGTA +
Preference number: 4 (lower is better)
Translates to: HSSYLRGILLMLTHSQVFIQLFN*LSMVNV
Trigger: TACATTAACCATGCTGAGGCAGTTGAACAACTGAAT...AAACACCTGGGAATGTGTTAGCATCAGGAGAATTCCTCTAAGGTATGAAGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CCA 90 bp CATTCTTCATACCTTAGAGGAATTCTCCTGATGCTAACACATTCCCAGGTGTTTTCAACTGCCTCAGCATaGTTAATGTATTCACTTGAA +
Preference number: 4 (lower is better)
Translates to: HSSYLRGILLMLTHSQVFSTASA*LMYSLE
Trigger: TTCAAGTGAATACATTAACCATGCTGAGGCAGTTGA...AAACACCTGGGAATGTGTTAGCATCAGGAGAATTCCTCTAAGGTATGAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS GCA 90 bp CCGGCACAGAGCCGGCGCACTGGGCTGGGGGCGCGGCGCGGGAAGTaGTGCAGGACGCGCGGGGACCCGCGATTCCCAGCCGGCGGATCC +
Preference number: 5 (lower is better)
Translates to: PAQSRRTGLGARRGK*CRTRGDPRFPAGGS
Trigger: GGATCCGCCGGCTGGGAATCGCGGGTCCCCGCGCGTCCTGCAGCACTTCCCGCGCCGCGCCCCCAGCCCAGTGCGCCGGCTCTGTGCCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS CCA 90 bp GCCGGAGGTCGGCGTGAGGCGAAGCCCAGCCTTCGGAGACCTGTCTaGGGGTCGGGACCCTCTCTCGAGGGCAGGCGGACAGGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: AGGRREAKPSLRRPV*GSGPSLEGRRTGGE
Trigger: CTCCCCGCCTGTCCGCCTGCCCTCGAGAGAGGGTCCCGACCCCCAGACAGGTCTCCGAAGGCTGGGCTTCGCCTCACGCCGACCTCCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460685.1
CDS GCA 90 bp GGACGCTCTGCACCGCCTTGTTCCGGAGCGCGCCGTCGTGGTAGATaGGGCTCATTCTCCCGACCGCCCGGGCACCCCGGCACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: GRSAPPCSGARRRGR*GSFSRPPGHPGTEP
Trigger: CGGCTCTGTGCCGGGGTGCCCGGGCGGTCGGGAGAATGAGCCGCATCTACCACGACGGCGCGCTCCGGAACAAGGCGGTGCAGAGCGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp AGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTGCGAGCAGCTCTGGCTaGTTGACCAGCCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SLRDADQPATPGNAVGLSASSSG*LTSPFS
Trigger: GCTGAAGGGGCTGGTCAACAAGCCAGAGCTGCTCGC...AGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS GCA 90 bp GATACAACTGCACCAACACCAGGTACCTACCCACTCCTCGTCCTCTaGCCCATCCCCCTGCTCTCGGATCTCCGCTGCAGCCCCCTTCGA +
Preference number: 5 (lower is better)
Translates to: DTTAPTPGTYPLLVL*PIPLLSDLRCSPLR
Trigger: TCGAAGGGGGCTGCAGCGGAGATCCGAGAGCAGGGGGATGGGGCAGAGGACGAGGAGTGGGTAGGTACCTGGTGTTGGTGCAGTTGTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CAA 90 bp AGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTCTGGTGGCGCTGAAGTaGGGCTCGATTTCATTTCCC +
Preference number: 5 (lower is better)
Translates to: SLRDADQPATPGNAVGLSLVALK*GSISFP
Trigger: GGGAAATGAAATCGAGCCCAACTTCAGCGCCACCAG...AGAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS TCA 90 bp CTGTTCCCGCCACAGCACGGCCACTGTCCCTTCTGGGGCAGGGCATaGGTCTGTGCAAAAGCAGCGCGGCAAGTAGCTGGAGTTTATAGT +
Preference number: 5 (lower is better)
Translates to: LFPPQHGHCPFWGRA*VCAKAARQVAGVYS
Trigger: ACTATAAACTCCAGCTACTTGCCGCGCTGCTTTTGCACAGACTCATGCCCTGCCCCAGAAGGGACAGTGGCCGTGCTGTGGCGGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460685.1
CDS-3UTR CAA 90 bp GACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGCGAGCAGCTCTGGCTaGTTGACCAGCCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: DKGYSPLRTNTRSSYSQAASSSG*LTSPFS
Trigger: GCTGAAGGGGCTGGTCAACAAGCCAGAGCTGCTCGC...AGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp TCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGTCTAAGGGACACGGAGGCTaGAAGCAGGATAGTACAGGC +
Preference number: 5 (lower is better)
Translates to: SPLRTNTRSSYSQAVLGSKGHGG*KQDSTG
Trigger: GCCTGTACTATCCTGCTTCAAGCCTCCGTGTCCCTT...AGACCCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp GAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCTTGACAGCTCTGGGTTaGAATCCTGATTCTGCTACT +
Preference number: 5 (lower is better)
Translates to: ESERCGPASHAWERCWPLLTALG*NPDSAT
Trigger: AGTAGCAGAATCAGGATTCAAACCCAGAGCTGTCAA...GAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACAGCAGCTCTGGCTTGTaGACCAGCCCCTTCAGCGCC +
Preference number: 5 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYSSSGL*TSPFSA
Trigger: GGCGCTGAAGGGGCTGGTCAACAAGCCAGAGCTGCT...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp GAGTCTGAGAGATGCGGACCAGCCAGCCACGCCTGGGAACGCTGTTGGCCTCTCGCTCAGAGGATTTGCTaGGTTCTGTTTGAAGATACA +
Preference number: 5 (lower is better)
Translates to: ESERCGPASHAWERCWPLAQRIC*VLFEDT
Trigger: TGTATCTTCAAACAGAACCAAGCAAATCCTCTGAGC...GAGAGGCCAACAGCGTTCCCAGGCGTGGCTGGCTGGTCCGCATCTCTCAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp ATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGAGGCAGCAGAATAGCTaGAACCCGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: IFPTPHQYQVQLLSGCPRRQQNS*NPGGRG
Trigger: ACCTCTGCCTCCCGGGTTCAAGCTATTCTGCTGCCT...CCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCTGGGGTTTCACCACATaGGCCAGTCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: HVMSRKARLTCREGPSLSWGFTT*ASLVSN
Trigger: GTTTGAGACCAGACTGGCCAATGTGGTGAAACCCCA...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp CTGACCAGGGCAGGAGGTATGGCAAAATCAGGGGCTTTGGCCTCACCATCTGCCCAGGGACAACCCACTTaGCTCAAGATTGGAGGCAAA +
Preference number: 5 (lower is better)
Translates to: LTRAGGMAKSGALASPSAQGQPT*LKIGGK
Trigger: TTTGCCTCCAATCTTGAGCAAAGTGGGTTGTCCCTG...GGCAGATGGTGAGGCCAAAGCCCCTGATTTTGCCATACCTCCTGCCCTGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS GCA 90 bp ACAACCTCAACCAGTATGTACCATGCTCCTGCCAGGAGATACAACTaGACCAACACCAGGTACCTACCCACTCCTCGTCCTCTGCCCCAT +
Preference number: 5 (lower is better)
Translates to: TTSTSMYHAPARRYN*TNTRYLPTPRPLPH
Trigger: ATGGGGCAGAGGACGAGGAGTGGGTAGGTACCTGGTGTTGGTGCAGTTGTATCTCCTGGCAGGAGCATGGTACATACTGGTTGAGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CAA 90 bp GCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTCTCTCCAGCTCCAGAGCTGGTGGCGCTGAAGTaGGGCTCGATTTCATTTCCC +
Preference number: 5 (lower is better)
Translates to: AMGKNQVRLGRLFSPAPELVALK*GSISFP
Trigger: GGGAAATGAAATCGAGCCCAACTTCAGCGCCACCAG...CTCTGGAGCTGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp ATTCCAGGTCTCTTCACAGATCTGGGTGTGGGTATACTACCCAAAAGGCAGTGTAGCAGCTCTGGCTTGTaGACCAGCCCCTTCAGCGCC +
Preference number: 5 (lower is better)
Translates to: IPGLFTDLGVGILPKRQCSSSGL*TSPFSA
Trigger: GGCGCTGAAGGGGCTGGTCAACAAGCCAGAGCTGCT...ACACTGCCTTTTGGGTAGTATACCCACACCCAGATCTGTGAAGAGACCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp CTACCACATCCTCTGGCCCCTGTTTCCAAGACCTTTCTGAAGGGCAAGGAAGCAAAGGGACACGGAGGCTaGAAGCAGGATAGTACAGGC +
Preference number: 5 (lower is better)
Translates to: LPHPLAPVSKTFLKGKEAKGHGG*KQDSTG
Trigger: GCCTGTACTATCCTGCTTCAAGCCTCCGTGTCCCTT...TGCTTCCTTGCCCTTCAGAAAGGTCTTGGAAACAGGGGCCAGAGGATGTGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp ATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGGCAAAATCAGGGGCTTaGGCCTCACCATCTGCCCAT +
Preference number: 5 (lower is better)
Translates to: IFPTPHQYQVQLLSGCPRAKSGA*ASPSAH
Trigger: ATGGGCAGATGGTGAGGCCAAAGCCCCTGATTTTGC...CCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS GCA 90 bp TATACAGCACGTAGTAGCGCTCCTTCCTGCCATGAGTGTCCAAGATaGTGTGCCGAGATACATCGATCAGTTCTCCCTCCAGCAGGACAC +
Preference number: 5 (lower is better)
Translates to: YTARSSAPSCHECPR*CAEIHRSVLPPAGH
Trigger: GTGTCCTGCTGGAGGGAGAACTGATCGATGTATCTCGGCACAGCATCTTGGACACTCATGGCAGGAAGGAGCGCTACTACGTGCTGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS CCA 90 bp CGATTTCATTTCCCTTGGCGTCGAATTTACGGCGATGGATGTGACTaGGCCGGATATACAGCACGTAGTAGCGCTCCTTCCTGCCATGAG +
Preference number: 5 (lower is better)
Translates to: RFHFPWRRIYGDGCD*AGYTARSSAPSCHE
Trigger: CTCATGGCAGGAAGGAGCGCTACTACGTGCTGTATATCCGGCCCAGTCACATCCATCGCCGTAAATTCGACGCCAAGGGAAATGAAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp AAGATAACACTCCCCATCTCCCCAGTAGATAAATGGACGAAAGAACGAATAACAACGCTCTGCACCGCCTaGTTCCGGAGCGCGCCGTCG +
Preference number: 5 (lower is better)
Translates to: KITLPISPVDKWTKERITTLCTA*FRSAPS
Trigger: CGACGGCGCGCTCCGGAACAAGGCGGTGCAGAGCGT...TGTTATTCGTTCTTTCGTCCATTTATCTACTGGGGAGATGGGGAGTGTTATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCGTGACTCTGGGCAGGTaGCTTAACCTGTCTGAGACC +
Preference number: 5 (lower is better)
Translates to: SGCLICTGPWNHTALIQSVTLGR*LNLSET
Trigger: GGTCTCAGACAGGTTAAGCAACCTGCCCAGAGTCAC...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp CTACCACATCCTCTGGCCCCTGTTTCCAAGACCTTTCTGAAGGGCAAGGAAGCATTATCCTCAGCCCACTaGGTTTTCCCATCCCTAGGG +
Preference number: 5 (lower is better)
Translates to: LPHPLAPVSKTFLKGKEALSSAH*VFPSLG
Trigger: CCCTAGGGATGGGAAAACCAAGTGGGCTGAGGATAA...TGCTTCCTTGCCCTTCAGAAAGGTCTTGGAAACAGGGGCCAGAGGATGTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCAGGCAGGAGAAACTCTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SGCLICTGPWNHTALIQSRQEKL*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGAGTTTCTCCTGCCT...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp TCTTTTCCCAAGTCAAGCAAGATCCACATGCCACCAAGTCCTGACGACATGGAGAGGGTCTTACCCAGGTaGGAGTGCAGTGGCACAGTC +
Preference number: 5 (lower is better)
Translates to: SFPKSSKIHMPPSPDDMERVLPR*ECSGTV
Trigger: GACTGTGCCACTGCACTCCAACCTGGGTAAGACCCT...CTCCATGTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTGACTTGGGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp ACCCTCTCTTTTCCCAAGTCAAGCAAGATCCACATGCCACCAAGTCCTGACGACGCAGAGTCAGGGTGTTaGATCTGTACAGGACCCTGG +
Preference number: 5 (lower is better)
Translates to: TLSFPKSSKIHMPPSPDDAESGC*ICTGPW
Trigger: CCAGGGTCCTGTACAGATCAAACACCCTGACTCTGC...GTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTGACTTGGGAAAAGAGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS GCA 90 bp TCTTCTCATCCTACCCACAACCTCAACCAGTATGTACCATGCTCCTaGCAGGAGATACAACTGCACCAACACCAGGTACCTACCCACTCC +
Preference number: 5 (lower is better)
Translates to: SSHPTHNLNQYVPCS*QEIQLHQHQVPTHS
Trigger: GGAGTGGGTAGGTACCTGGTGTTGGTGCAGTTGTATCTCCTGGCAGGAGCATGGTACATACTGGTTGAGGTTGTGGGTAGGATGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS GCA 90 bp CTGTCGTCTTCTCATCCTACCCACAACCTCAACCAGTATGTACCATaGTCCTGCCAGGAGATACAACTGCACCAACACCAGGTACCTACC +
Preference number: 5 (lower is better)
Translates to: LSSSHPTHNLNQYVP*SCQEIQLHQHQVPT
Trigger: GGTAGGTACCTGGTGTTGGTGCAGTTGTATCTCCTGGCAGGAGCATGGTACATACTGGTTGAGGTTGTGGGTAGGATGAGAAGACGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CAA 90 bp ACCCTCTCTTTTCCCAAGTCAAGCAAGATCCACATGCCACCAAGTCCTGACGACTTTTGGGCCATGATGTaGTCTGTCCAGGATGCCCCT +
Preference number: 5 (lower is better)
Translates to: TLSFPKSSKIHMPPSPDDFWAMM*SVQDAP
Trigger: AGGGGCATCCTGGACAGACAACATCATGGCCCAAAA...GTCGTCAGGACTTGGTGGCATGTGGATCTTGCTTGACTTGGGAAAAGAGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp AAGGGTCATCATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCCCCCTTCGAACACTTTaGGGCCATGATGTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: KGHHVMSRKARLTCREGPPLRTL*GHDVVC
Trigger: ACAGACAACATCATGGCCCAAAAGTGTTCGAAGGGG...GGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATGATGACCCTT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp TCAGGGTGTTTGATCTGTACAGGACCCTGGAACCACACTGCCCTGATTCAAAGCTTAGGACCTCTCCTATaGACACACTGGGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SGCLICTGPWNHTALIQSLGPLL*THWASL
Trigger: CAAGGAGGCCCAGTGTGTCAATAGGAGAGGTCCTAA...GCTTTGAATCAGGGCAGTGTGGTTCCAGGGTCCTGTACAGATCAAACACCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp CTACCACATCCTCTGGCCCCTGTTTCCAAGACCTTTCTGAAGGGCAAGGAAGCATCGATTTCATTTCCCTaGGCGTCGAATTTACGGCGA +
Preference number: 5 (lower is better)
Translates to: LPHPLAPVSKTFLKGKEASISFP*ASNLRR
Trigger: TCGCCGTAAATTCGACGCCAAGGGAAATGAAATCGA...TGCTTCCTTGCCCTTCAGAAAGGTCTTGGAAACAGGGGCCAGAGGATGTGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp ATAGTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCATTCTTCATAAGCAGCTCTGGCTTGTaGACCAGCCCCTTCAGCGCC +
Preference number: 5 (lower is better)
Translates to: IVRFRATYKKGPRLSFFISSSGL*TSPFSA
Trigger: GGCGCTGAAGGGGCTGGTCAACAAGCCAGAGCTGCT...TATGAAGAATGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CAA 90 bp ATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGCCAGTGAAATTACACTaGGTCACTGTTCCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: IFPTPHQYQVQLLSGCPRPVKLH*VTVPAS
Trigger: TGAGGCTGGAACAGTGACCAAGTGTAATTTCACTGG...CCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS GCA 90 bp AGCCCCCTTCGAACACTTTTGGGCCATGATGTTGTCTGTCCAGGATaGCCCTGTCTTTCCATCACCAGTGAAATTACACTTGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: SPLRTLLGHDVVCPG*PCLSITSEITLGHC
Trigger: ACAGTGACCAAGTGTAATTTCACTGGTGATGGAAAGACAGGGGCATCCTGGACAGACAACATCATGGCCCAAAAGTGTTCGAAGGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357484.10
ENST00000460685.1
ENST00000560096.1
CDS-3UTR CAA 90 bp CATTCTTCATACCTTAGAGGAATTCTCCTGATGCTAACACATTCCCAGGTGTTTGCGAGCAGCTCTGGCTaGTTGACCAGCCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: HSSYLRGILLMLTHSQVFASSSG*LTSPFS
Trigger: GCTGAAGGGGCTGGTCAACAAGCCAGAGCTGCTCGC...AAACACCTGGGAATGTGTTAGCATCAGGAGAATTCCTCTAAGGTATGAAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CAA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACGTTCCAGCCTCAAGTTaGGCCAATGAATCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYVPASS*ANESRK
Trigger: CTTCCTGGATTCATTGGCCAAACTTGAGGCTGGAAC...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp GCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGTTTTGGGCCATGATGTaGTCTGTCCAGGATGCCCCT +
Preference number: 5 (lower is better)
Translates to: AELVQRVFQGGYGEEPGKFWAMM*SVQDAP
Trigger: AGGGGCATCCTGGACAGACAACATCATGGCCCAAAA...CTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp ATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACTCTCAGGCTGTCCTAGGACAGTGGTCATGGGTTaGGTTTTAGCAGAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: IFPTPHQYQVQLLSGCPRTVVMG*VLAELV
Trigger: AACAAGCTCTGCTAAAACCAAACCCATGACCACTGT...CCTAGGACAGCCTGAGAGTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCTTGAAATCTGAGTGCTaGGATGTAAATTCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: HVMSRKARLTCREGPSLSLKSEC*DVNSSC
Trigger: GCAAGAGGAATTTACATCCAAGCACTCAGATTTCAA...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp CATGTAATGTCTAGGAAGGCTAGACTCACATGCAGGGAGGGGCCCTCCCTGAGCCAGATGTTTCAGAATTaGTCTAGCAGGTTTTCCAGT +
Preference number: 5 (lower is better)
Translates to: HVMSRKARLTCREGPSLSQMFQN*SSRFSS
Trigger: ACTGGAAAACCTGCTAGACAAATTCTGAAACATCTG...GCTCAGGGAGGGCCCCTCCCTGCATGTGAGTCTAGCCTTCCTAGACATTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp GCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTCTCTCCAGCTCCAGAGCTGGGGTTTGCTTGTTaGTTTTTCAGAGATAGGGTC +
Preference number: 5 (lower is better)
Translates to: AMGKNQVRLGRLFSPAPELGFAC*FFRDRV
Trigger: GACCCTATCTCTGAAAAACAAACAAGCAAACCCCAG...CTCTGGAGCTGGAGAGAACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp AGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTGTTCCAGCCTCAAGTTaGGCCAATGAATCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RVFQGGYGEEPGKTWQTVVPASS*ANESRK
Trigger: CTTCCTGGATTCATTGGCCAAACTTGAGGCTGGAAC...AACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp GTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCATTCTTCATACCTTTTTGGGCCATGATGTaGTCTGTCCAGGATGCCCCT +
Preference number: 5 (lower is better)
Translates to: VRFRATYKKGPRLSFFIPFWAMM*SVQDAP
Trigger: AGGGGCATCCTGGACAGACAACATCATGGCCCAAAA...AGGTATGAAGAATGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CAA 90 bp AAGACACCCCGCCCTTTTTGTTGCTTTAGGACCTCTCCTATTGACACACTGGGCACAGTGGTCATGGGTTaGGTTTTAGCAGAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: KTPRPFCCFRTSPIDTLGTVVMG*VLAELV
Trigger: AACAAGCTCTGCTAAAACCAAACCCATGACCACTGT...GCCCAGTGTGTCAATAGGAGAGGTCCTAAAGCAACAAAAAGGGCGGGGTGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp AAGACACCCCGCCCTTTTTGTTGCTTTAGGACCTCTCCTATTGACACACTGGGCCCAGAGTTCTGGGGTTaGCTTGTTTGTTTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: KTPRPFCCFRTSPIDTLGPEFWG*LVCFSE
Trigger: CTCTGAAAAACAAACAAGCAAACCCCAGAACTCTGG...GCCCAGTGTGTCAATAGGAGAGGTCCTAAAGCAACAAAAAGGGCGGGGTGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp AGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTTGGCAGACTGTTCCAGTGAAATTACACTaGGTCACTGTTCCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: RVFQGGYGEEPGKTWQTVPVKLH*VTVPAS
Trigger: TGAGGCTGGAACAGTGACCAAGTGTAATTTCACTGG...AACAGTCTGCCAAGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp GAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTCCCCTTCGAACACTTTaGGGCCATGATGTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: ELVQRVFQGGYGEEPGKTPLRTL*GHDVVC
Trigger: ACAGACAACATCATGGCCCAAAAGTGTTCGAAGGGG...AGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp TTTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTCGATTTCATTTCCCTaGGCGTCGAATTTACGGCGA +
Preference number: 5 (lower is better)
Translates to: FSRACSKSIPRWLWGRTRSISFP*ASNLRR
Trigger: TCGCCGTAAATTCGACGCCAAGGGAAATGAAATCGA...CCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS-3UTR CAA 90 bp TTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCATTCTTCATACCTTCCAGTGAAATTACACTaGGTCACTGTTCCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: LGSEPPTRKVPGCHSSYLPVKLH*VTVPAS
Trigger: TGAGGCTGGAACAGTGACCAAGTGTAATTTCACTGG...AAGGTATGAAGAATGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CAA 90 bp ATAGTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCATTCTTCATACCCCTTCGAACACTTTaGGGCCATGATGTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: IVRFRATYKKGPRLSFFIPLRTL*GHDVVC
Trigger: ACAGACAACATCATGGCCCAAAAGTGTTCGAAGGGG...TATGAAGAATGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CAA 90 bp CTTCAATTCCAGGTCTCTTCACAGATCTGGGTGTGGGTATACTACCCAAAAGGCGGATGTAAATTCCTCTaGCCACTGTATACTATCCTA +
Preference number: 5 (lower is better)
Translates to: LQFQVSSQIWVWVYYPKGGCKFL*PLYTIL
Trigger: TAGGATAGTATACAGTGGCAAGAGGAATTTACATCC...GCCTTTTGGGTAGTATACCCACACCCAGATCTGTGAAGAGACCTGGAATTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp CTGCATTTAGACAAGGGATATTCCCCACTCCGCACCAATACCAGGTCCAGTTACAAACACCACCACTTTTaGTTTCTAGCCCTATTAACA +
Preference number: 5 (lower is better)
Translates to: LHLDKGYSPLRTNTRSSYKHHHF*FLALLT
Trigger: TGTTAATAGGGCTAGAAACAAAAAGTGGTGGTGTTT...GTAACTGGACCTGGTATTGGTGCGGAGTGGGGAATATCCCTTGTCTAAATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp GAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTAAGACTAAATATGTACTACTTTaGCAGCCAGAGTTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: ELVQRVFQGGYGEEPGKTKYVLL*QPEFWG
Trigger: ACCCCAGAACTCTGGCTGCAAAAGTAGTACATATTT...AGTCTTACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp TTAGCAGAGCTTGTTCAAAGAGTATTCCAAGGTGGCTATGGGGAAGAACCAGGTCCACTTTGCTCAAGATaGGAGGCAAATACACCAAAA +
Preference number: 5 (lower is better)
Translates to: LAELVQRVFQGGYGEEPGPLCSR*EANTPK
Trigger: TTTTGGTGTATTTGCCTCCAATCTTGAGCAAAGTGG...ACCTGGTTCTTCCCCATAGCCACCTTGGAATACTCTTTGAACAAGCTCTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS-3UTR CAA 90 bp ATAGTTAGGTTCAGAGCCACCTACAAGAAAGGTCCCAGGTTGTCATTCTTCATAAAACTACGCATTCAGTaGTTCAACTGCCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: IVRFRATYKKGPRLSFFIKLRIQ*FNCLSM
Trigger: CATGCTGAGGCAGTTGAACAACTGAATGCGTAGTTT...TATGAAGAATGACAACCTGGGACCTTTCTTGTAGGTGGCTCTGAACCTAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS-3UTR CAA 90 bp AGTTGTTCAACTGCCTCAGCATGGTTAATGTATTCACTTGAAGTAGAAATGTTTGTTCCAGCCTCAAGTTaGGCCAATGAATCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SCSTASAWLMYSLEVEMFVPASS*ANESRK
Trigger: CTTCCTGGATTCATTGGCCAAACTTGAGGCTGGAAC...AAACATTTCTACTTCAAGTGAATACATTAACCATGCTGAGGCAGTTGAACAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS GCA 72 bp GCACCGCCTTGTTCCGGAGCGCGCCGTCGTGGTAGATaGGGCTCATTCTCCCGACCGCCCGGGCACCCCGGC +
Preference number: 6 (lower is better)
Translates to: APPCSGARRRGR*GSFSRPPGHPG
Trigger: GCCGGGGTGCCCGGGCGGTCGGGAGAATGAGCCGCATCTACCACGACGGCGCGCTCCGGAACAAGGCGGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357484.10
CDS CCA 72 bp CGGCGTGAGGCGAAGCCCAGCCTTCGGAGACCTGTCTaGGGGTCGGGACCCTCTCTCGAGGGCAGGCGGACA +
Preference number: 6 (lower is better)
Translates to: RREAKPSLRRPV*GSGPSLEGRRT
Trigger: TGTCCGCCTGCCCTCGAGAGAGGGTCCCGACCCCCAGACAGGTCTCCGAAGGCTGGGCTTCGCCTCACGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460685.1
CDS CCA 72 bp GTCGGGGGTGAGGCTCTCTGTCAGCGCGAGCAGCTCTaGCTTGTTGACCAGCCCCTTCAGCGCCTCGGGCGT +
Preference number: 6 (lower is better)
Translates to: VGGEALCQREQL*LVDQPLQRLGR
Trigger: ACGCCCGAGGCGCTGAAGGGGCTGGTCAACAAGCCAGAGCTGCTCGCGCTGACAGAGAGCCTCACCCCCGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS CCA 72 bp TCCATCTCTGACTCGGGCATCCAGAACGCCACTGTGTaGTCGGGGGTGAGGCTCTCTGTCAGCGCGAGCAGC +
Preference number: 6 (lower is better)
Translates to: SISDSGIQNATV*SGVRLSVSASS
Trigger: GCTGCTCGCGCTGACAGAGAGCCTCACCCCCGACCACACAGTGGCGTTCTGGATGCCCGAGTCAGAGATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357484.10
ENST00000460685.1
ENST00000560096.1
CDS TCA 72 bp TGTAAATGGAATGGTCCCTTCGGCCTCATAACCCTGTaGCGACAGGGCCTGGCCCTCCAAATCCTCCTCACC +
Preference number: 6 (lower is better)
Translates to: CKWNGPFGLITL*RQGLALQILLT
Trigger: GGTGAGGAGGATTTGGAGGGCCAGGCCCTGTCGTCACAGGGTTATGAGGCCGAAGGGACCATTCCATTTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460685.1
CDS GCA 72 bp GTTCATGGAAGAAATGTTCCACAATGCTACAGAAGGTaGTGGTGCCCCCAGAGGCAGCCACGTCCCTCAGTC +
Preference number: 6 (lower is better)
Translates to: VHGRNVPQCYRR*WCPQRQPRPSV
Trigger: GACTGAGGGACGTGGCTGCCTCTGGGGGCACCAGCACCTTCTGTAGCATTGTGGAACATTTCTTCCATGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS CCA 72 bp TTCCCTTGGCGTCGAATTTACGGCGATGGATGTGACTaGGCCGGATATACAGCACGTAGTAGCGCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: FPWRRIYGDGCD*AGYTARSSAPS
Trigger: GGAAGGAGCGCTACTACGTGCTGTATATCCGGCCCAGTCACATCCATCGCCGTAAATTCGACGCCAAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS GCA 72 bp CGTAGTAGCGCTCCTTCCTGCCATGAGTGTCCAAGATaGTGTGCCGAGATACATCGATCAGTTCTCCCTCCA +
Preference number: 6 (lower is better)
Translates to: RSSAPSCHECPR*CAEIHRSVLPP
Trigger: TGGAGGGAGAACTGATCGATGTATCTCGGCACAGCATCTTGGACACTCATGGCAGGAAGGAGCGCTACTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357484.10
ENST00000460685.1
CDS GCA 72 bp ACCAGTATGTACCATGCTCCTGCCAGGAGATACAACTaGACCAACACCAGGTACCTACCCACTCCTCGTCCT +
Preference number: 6 (lower is better)
Translates to: TSMYHAPARRYN*TNTRYLPTPRP
Trigger: AGGACGAGGAGTGGGTAGGTACCTGGTGTTGGTGCAGTTGTATCTCCTGGCAGGAGCATGGTACATACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS GCA 72 bp CCTACCCACAACCTCAACCAGTATGTACCATGCTCCTaGCAGGAGATACAACTGCACCAACACCAGGTACCT +
Preference number: 6 (lower is better)
Translates to: PTHNLNQYVPCS*QEIQLHQHQVP
Trigger: AGGTACCTGGTGTTGGTGCAGTTGTATCTCCTGGCAGGAGCATGGTACATACTGGTTGAGGTTGTGGGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS GCA 72 bp TCTCATCCTACCCACAACCTCAACCAGTATGTACCATaGTCCTGCCAGGAGATACAACTGCACCAACACCAG +
Preference number: 6 (lower is better)
Translates to: SHPTHNLNQYVP*SCQEIQLHQHQ
Trigger: CTGGTGTTGGTGCAGTTGTATCTCCTGGCAGGAGCATGGTACATACTGGTTGAGGTTGTGGGTAGGATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560096.1
CDS CAA 72 bp GTGAAATTACACTTGGTCACTGTTCCAGCCTCAAGTTaGGCCAATGAATCCAGGAAGGGACCATCGCCCCGA +
Preference number: 6 (lower is better)
Translates to: VKLHLVTVPASS*ANESRKGPSPR
Trigger: TCGGGGCGATGGTCCCTTCCTGGATTCATTGGCCAAACTTGAGGCTGGAACAGTGACCAAGTGTAATTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357484.10
ENST00000460685.1
ENST00000560096.1
CDS CAA 90 bp TCTGTCCAGGATGCCCCTGTCTTTCCATCACCAGTGAAATTACACTaGGTCACTGTTCCAGCCTCAAGTTTGGCCAATGAATCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SVQDAPVFPSPVKLH*VTVPASSLANESRK
Trigger: CTTCCTGGATTCATTGGCCAAACTTGAGGCTGGAACAGTGACCAAGTGTAATTTCACTGGTGATGGAAAGACAGGGGCATCCTGGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357484.10
ENST00000460685.1
ENST00000560096.1
CDS GCA 72 bp CGAACACTTTTGGGCCATGATGTTGTCTGTCCAGGATaGCCCTGTCTTTCCATCACCAGTGAAATTACACTT +
Preference number: 6 (lower is better)
Translates to: RTLLGHDVVCPG*PCLSITSEITL
Trigger: AAGTGTAATTTCACTGGTGATGGAAAGACAGGGGCATCCTGGACAGACAACATCATGGCCCAAAAGTGTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357484.10
ENST00000460685.1
ENST00000560096.1
CDS CAA 72 bp GATGCCCCTGTCTTTCCATCACCAGTGAAATTACACTaGGTCACTGTTCCAGCCTCAAGTTTGGCCAATGAA +
Preference number: 6 (lower is better)
Translates to: DAPVFPSPVKLH*VTVPASSLANE
Trigger: TTCATTGGCCAAACTTGAGGCTGGAACAGTGACCAAGTGTAATTTCACTGGTGATGGAAAGACAGGGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357484.10
ENST00000460685.1
ENST00000560096.1
CDS CAA 90 bp TGGTTCAACGCTTTTATAGGTTCCATATACGAGATCACACAGTATTaGTCTTTCTGTATCTGGCTTATTTCACTTAGCACAATTCTTCAG +
Preference number: 6 (lower is better)
Translates to: WFNAFIGSIYEITQY*SFCIWLISLSTILQ
Trigger: CTGAAGAATTGTGCTAAGTGAAATAAGCCAGATACAGAAAGACAAATACTGTGTGATCTCGTATATGGAACCTATAAAAGCGTTGAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460685.1