Pregenerated sensors for ARPC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000163466Ensembl transcript IDs: ENST00000295685.14, ENST00000315717.10, ENST00000414983.5, ENST00000420104.5, ENST00000420201.5, ENST00000456575.1, ENST00000462034.1, ENST00000465395.5, ENST00000470146.5, ENST00000471355.5, ENST00000477992.1, ENST00000478612.5, ENST00000480062.5, ENST00000484961.1, ENST00000487321.1, ENST00000489598.5, ENST00000491780.5
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTATCCTGGTTCTCACTTTGGGGTCCTGCTAAATGCCTCAGAATTTaGGACATGCCACTGAATCACAGGGTAAAAAGGCTGTTCAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: VSWFSLWGPAKCLRI*DMPLNHRVKRLFSF Trigger: AAAACTGAACAGCCTTTTTACCCTGTGATTCAGTGGCATGTCTCAAATTCTGAGGCATTTAGCAGGACCCCAAAGTGAGAACCAGGATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| 3UTR CCA 90 bp | CAGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATaGAATCCTTGGATGCCGGAAGATTTTCAAGGTCATATAGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: QRQNNFASTCQLDAQ*NPWMPEDFQGHIAK Trigger: CTTTGCTATATGACCTTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| 3UTR GCA 90 bp | GGAAGTATTTTTCAAAGACAGAGGCAAAACAATTTCGCTTCAACATaGCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGATTTT | + |
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Preference number: 1 (lower is better) Translates to: GSIFQRQRQNNFAST*QLDAQWNPWMPEDF Trigger: AAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCTGTCTTTGAAAAATACTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| 3UTR-3UTR CCA 90 bp | CATGCCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGATTTTCAAGGTCAGAGACATTGTATCCTaGTTCTCACTTTGGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: HASLMHNGILGCRKIFKVRDIVS*FSLWGP Trigger: AGGACCCCAAAGTGAGAACCAGGATACAATGTCTCT...GACCTTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| 3UTR-3UTR CCA 90 bp | CACCTTTCCAATGACCACATCGTCGTCATCCTTAAACACTGTGCTGAAGACTACCAGCTTGATGCACAATaGAATCCTTGGATGCCGGAA | + |
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Preference number: 2 (lower is better) Translates to: HLSNDHIVVILKHCAEDYQLDAQ*NPWMPE Trigger: TTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTG...GTAGTCTTCAGCACAGTGTTTAAGGATGACGACGATGTGGTCATTGGAAAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGAAATGCCTCAGAATTTaGGACATGCCACTGAATCAC | + |
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Preference number: 2 (lower is better) Translates to: ISLQHASLMHNGILGCRKKCLRI*DMPLNH Trigger: GTGATTCAGTGGCATGTCTCAAATTCTGAGGCATTT...CTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTTCAAGGATGACACGGTaGCTTTCAATTCCTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RGKTISLQHASLMHNGILSRMTR*LSIPLA Trigger: GGCCAGAGGAATTGAAAGGCACCGTGTCATCCTTGA...AAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| 3UTR-3UTR GCA 90 bp | GAACACCTTTCCAATGACCACATCGTCGTCATCCTTAAACACTGTGCTGAAGACCTCATCAGCACCATGTaGCTGAAGTTCCTTGTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: EHLSNDHIVVILKHCAEDLISTM*LKFLVE Trigger: TTCTACAAGGAACTTCAGGCACATGGTGCTGATGAG...GTCTTCAGCACAGTGTTTAAGGATGACGACGATGTGGTCATTGGAAAGGTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| 3UTR-3UTR TCA 90 bp | CTTCAACATGCCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGATTTTCGTCTCCATTAGGATTTaGAATATGATAGAGGACCCC | + |
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Preference number: 2 (lower is better) Translates to: LQHASLMHNGILGCRKIFVSIRI*NMIEDP Trigger: GGGGTCCTCTATCATATTTCAAATCCTAATGGAGAC...GAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| 3UTR-3UTR CCA 90 bp | ATGAACACCTTTCCAATGACCACATCGTCGTCATCCTTAAACACTGTGCTGAAGGCACAATGGAATCCTTaGATGCCGGAAGATTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: MNTFPMTTSSSSLNTVLKAQWNP*MPEDFQ Trigger: TTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGC...CTTCAGCACAGTGTTTAAGGATGACGACGATGTGGTCATTGGAAAGGTGTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTTTCAAAGACAGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCATTCAACATGCCAGCTTaGTGCACAATGGAATCCTTG | + |
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Preference number: 2 (lower is better) Translates to: IFQRQRQNNFASTCQLDAFNMPA*CTMESL Trigger: CAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAA...TGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCTGTCTTTGAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTTTCAAAGACAGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCATGTTCTATTCAAGGATaGCACGGTGCCTTTCAATTC | + |
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Preference number: 2 (lower is better) Translates to: IFQRQRQNNFASTCQLDACSIQG*HGAFQF Trigger: GAATTGAAAGGCACCGTGTCATCCTTGAATAGAACA...TGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCTGTCTTTGAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| 3UTR TCA 72 bp | TTCTCACTTTGGGGTCCTGCTAAATGCCTCAGAATTTaGGACATGCCACTGAATCACAGGGTAAAAAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: FSLWGPAKCLRI*DMPLNHRVKRL Trigger: CAGCCTTTTTACCCTGTGATTCAGTGGCATGTCTCAAATTCTGAGGCATTTAGCAGGACCCCAAAGTGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| 3UTR-3UTR CAA 90 bp | CAACATGCCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGATTTTCAAGTCTTCCAAGATCATCTaGTCGAGGACTCTTGTTGTA | + |
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Preference number: 3 (lower is better) Translates to: QHASLMHNGILGCRKIFKSSKII*SRTLVV Trigger: TACAACAAGAGTCCTCGACAAGATGATCTTGGAAGA...CTTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| 3UTR CCA 72 bp | GCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTaGATGCCGGAAGATTTTCAAGGTCATATAGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: ASTCQLDAQWNP*MPEDFQGHIAK Trigger: CTTTGCTATATGACCTTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| 3UTR CCA 72 bp | AACAATTTCGCTTCAACATGCCAGCTTGATGCACAATaGAATCCTTGGATGCCGGAAGATTTTCAAGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: NNFASTCQLDAQ*NPWMPEDFQGH Trigger: ATGACCTTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| 3UTR-3UTR CAA 90 bp | CAACATGCCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGATTTTCAAGTATAGCAAAGAGACATaGTATCCTGGTTCTCACTTT | + |
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Preference number: 3 (lower is better) Translates to: QHASLMHNGILGCRKIFKYSKET*YPGSHF Trigger: AAAGTGAGAACCAGGATACAATGTCTCTTTGCTATA...CTTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| CDS-3UTR CCA 90 bp | AGAGGACCCCATCGAAATCTCCAGGTAACAGCACTTCAGAGCTGCAAAAGTCTTCCTCCAGCAGGATCATaGCGGCGGCTGGCCCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: RGPHRNLQVTALQSCKSLPPAGS*RRLAPE Trigger: TTCGGGGGCCAGCCGCCGCCATGATCCTGCTGGAGG...AAGACTTTTGCAGCTCTGAAGTGCTGTTACCTGGAGATTTCGATGGGGTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| CDS-3UTR GCA 90 bp | AGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTCGCCGCCGCCGCCACTaGCGCTTCACCGACAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: RGKTISLQHASLMHNGILRRRRH*RFTDKP Trigger: GGGCTTGTCGGTGAAGCGGCAGTGGCGGCGGCGGCG...AAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| CDS-3UTR TCA 90 bp | CATGCCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGATTTTCAAGGTCCCGCGTTCTCGAACTTaGGCGCGAGCGTCTCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: HASLMHNGILGCRKIFKVPRSRT*ARASPR Trigger: TCGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGG...GACCTTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| CDS-3UTR TCA 90 bp | CACTTCAGAGCTGCAAAAGTCTTCCAAGATCATCTTGTCGAGGACTCTTGTTGTCCGCGTTCTCGAACTTaGGCGCGAGCGTCTCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: HFRAAKVFQDHLVEDSCCPRSRT*ARASPR Trigger: TCGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGG...ACAACAAGAGTCCTCGACAAGATGATCTTGGAAGACTTTTGCAGCTCTGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| CDS-3UTR TCA 90 bp | AGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTCGAGCGTCTCCTCGATaGTGCGGTTGTTCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGKTISLQHASLMHNGILRASPR*CGCSPP Trigger: TGGAGGTGAACAACCGCATCATCGAGGAGACGCTCG...AAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| CDS-3UTR TCA 90 bp | AAAGACAGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGACGAGCGTCTCCTCGATaGTGCGGTTGTTCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KDRGKTISLQHASLMHNGRASPR*CGCSPP Trigger: TGGAGGTGAACAACCGCATCATCGAGGAGACGCTCG...TCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCTGTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| CDS-3UTR GCA 90 bp | GACCACATCGTCGTCATCCTTAAACACTGTGCTGAAGACTACTGTGACTCTGTCCTCATCAGCACCATGTaGCTGAAGTTCCTTGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: DHIVVILKHCAEDYCDSVLISTM*LKFLVE Trigger: TTCTACAAGGAACTTCAGGCACATGGTGCTGATGAG...GACAGAGTCACAGTAGTCTTCAGCACAGTGTTTAAGGATGACGACGATGTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| CDS-3UTR CCA 90 bp | CTTCAACATGCCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGATTTTCCAGCTTGATGCACAATaGAATCCTTGGATGCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: LQHASLMHNGILGCRKIFQLDAQ*NPWMPE Trigger: TTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTG...GAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| CDS-3UTR TCA 90 bp | ATGACCACATCGTCGTCATCCTTAAACACTGTGCTGAAGACTACTGTGACTCTGTTCAACATGCCAGCTTaGTGCACAATGGAATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: MTTSSSSLNTVLKTTVTLFNMPA*CTMESL Trigger: CAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAA...CAGAGTCACAGTAGTCTTCAGCACAGTGTTTAAGGATGACGACGATGTGGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| CDS-3UTR TCA 90 bp | CATGCCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGATTTTCAAGGTCTGTTCTATTCAAGGATaGCACGGTGCCTTTCAATTC | + |
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Preference number: 4 (lower is better) Translates to: HASLMHNGILGCRKIFKVCSIQG*HGAFQF Trigger: GAATTGAAAGGCACCGTGTCATCCTTGAATAGAACA...GACCTTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| CDS-3UTR GCA 90 bp | CATGCCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGATTTTCAAGGTCAATTTCGCTTCAACATaGCAGCTTGATGCACAATGG | + |
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Preference number: 4 (lower is better) Translates to: HASLMHNGILGCRKIFKVNFAST*QLDAQW Trigger: CCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATT...GACCTTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| 3UTR CAA 72 bp | GACAGAGGCAAAACAATTTCGCTTCAACATGCCAGCTaGATGCACAATGGAATCCTTGGATGCCGGAAGATT | + |
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Preference number: 4 (lower is better) Translates to: DRGKTISLQHAS*MHNGILGCRKI Trigger: AATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| CDS-3UTR GCA 90 bp | GCCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGATTTTCAAGGTCATAAATTTCGCTTCAACATaGCAGCTTGATGCACAATGG | + |
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Preference number: 4 (lower is better) Translates to: ASLMHNGILGCRKIFKVINFAST*QLDAQW Trigger: CCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATT...TATGACCTTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| CDS-3UTR CCA 90 bp | GAACACCTTTCCAATGACCACATCGTCGTCATCCTTAAACACTGTGCTGAAGACGCACAATGGAATCCTTaGATGCCGGAAGATTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: EHLSNDHIVVILKHCAEDAQWNP*MPEDFQ Trigger: TTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGC...GTCTTCAGCACAGTGTTTAAGGATGACGACGATGTGGTCATTGGAAAGGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTGTGGTTGTATTCCTCTaGGTTCATTCACCTGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: QRQNNFASTCQLDAQWNPVVVFL*VHSPAN Trigger: ATTTGCAGGTGAATGAACTCAGAGGAATACAACCAC...AGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| CDS-3UTR GCA 90 bp | CAGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTAAATGTTACTTCTACTaGTTCCGGTTTGTTTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: QRQNNFASTCQLDAQWNPKCYFY*FRFVSG Trigger: GCCGGAAACAAACCGGAAGCAGTAGAAGTAACATTT...AGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| CDS-3UTR GCA 90 bp | ATTTTTCAAAGACAGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCATCAAGGATGACACGGTaGCTTTCAATTCCTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: IFQRQRQNNFASTCQLDASRMTR*LSIPLA Trigger: GGCCAGAGGAATTGAAAGGCACCGTGTCATCCTTGA...TGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCTGTCTTTGAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| CDS-3UTR CCA 90 bp | ATGCCACTGAATCACAGGGTAAAAAGGCTGTTCAGTTTTTCCACTTTAAACCTCCAGCTTGATGCACAATaGAATCCTTGGATGCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: MPLNHRVKRLFSFSTLNLQLDAQ*NPWMPE Trigger: TTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTG...GAGGTTTAAAGTGGAAAAACTGAACAGCCTTTTTACCCTGTGATTCAGTGGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| CDS-3UTR CCA 90 bp | AGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTAGAGACATTGTATCCTaGTTCTCACTTTGGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: RGKTISLQHASLMHNGILRDIVS*FSLWGP Trigger: AGGACCCCAAAGTGAGAACCAGGATACAATGTCTCT...AAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| CDS-3UTR TCA 90 bp | GGATTTACCAAGAAACTCCCGTACACCCTCTTTAATAACTCATCAGCACCATGTGTCTCCATTAGGATTTaGAATATGATAGAGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: GFTKKLPYTLFNNSSAPCVSIRI*NMIEDP Trigger: GGGGTCCTCTATCATATTTCAAATCCTAATGGAGAC...ACATGGTGCTGATGAGTTATTAAAGAGGGTGTACGGGAGTTTCTTGGTAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| CDS-3UTR TCA 90 bp | AAAGACAGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGATCTGGCCATGAATGTTaGGACAACCTATTAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: KDRGKTISLQHASLMHNGSGHEC*DNLLED Trigger: GTCTTCTAATAGGTTGTCTCAACATTCATGGCCAGA...TCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCTGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| CDS-3UTR TCA 90 bp | AGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTAAATGCCTCAGAATTTaGGACATGCCACTGAATCAC | + |
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Preference number: 4 (lower is better) Translates to: RGKTISLQHASLMHNGILKCLRI*DMPLNH Trigger: GTGATTCAGTGGCATGTCTCAAATTCTGAGGCATTT...AAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| CDS-3UTR GCA 90 bp | AAGAGACATTGTATCCTGATTCTGGATTTACCAAGAAACTCCCGTACACCCTCTAAATGTTACTTCTACTaGTTCCGGTTTGTTTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: KRHCILILDLPRNSRTPSKCYFY*FRFVSG Trigger: GCCGGAAACAAACCGGAAGCAGTAGAAGTAACATTT...AGAGGGTGTACGGGAGTTTCTTGGTAAATCCAGAATCAGGATACAATGTCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| CDS-3UTR GCA 90 bp | ATGCCACTGAATCACAGGGTAAAAAGGCTGTTCAGTTTTTCCACTTTAAACCTCCTCATCAGCACCATGTaGCTGAAGTTCCTTGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: MPLNHRVKRLFSFSTLNLLISTM*LKFLVE Trigger: TTCTACAAGGAACTTCAGGCACATGGTGCTGATGAG...GAGGTTTAAAGTGGAAAAACTGAACAGCCTTTTTACCCTGTGATTCAGTGGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000420201.5 |
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| CDS-3UTR CCA 90 bp | CAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTGGATGGCACAATGGAATCCTTaGATGCCGGAAGATTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: QNNFASTCQLDAQWNPWMAQWNP*MPEDFQ Trigger: TTGAAAATCTTCCGGCATCCAAGGATTCCATTGTGC...CATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| CDS-3UTR GCA 90 bp | CCTGATTCTGGATTTACCAAGAAACTCCCGTACACCCTCTTTAATAACTCATCAAATGGAATCCTTGGATaGCGGAAGATTTTCAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: PDSGFTKKLPYTLFNNSSNGILG*RKIFKV Trigger: GACCTTGAAAATCTTCCGGCATCCAAGGATTCCATT...TGATGAGTTATTAAAGAGGGTGTACGGGAGTTTCTTGGTAAATCCAGAATCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| CDS GCA 90 bp | CAGCAGGATCATGGCGGCGGCTGGCCCCCGAAGCCTGAACCCGCCTaGCGAGCCGCCGCCGCCGCCGCCACTGCCGCTTCACCGACAAGC | + |
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Preference number: 5 (lower is better) Translates to: QQDHGGGWPPKPEPA*RAAAAAATAASPTS Trigger: GCTTGTCGGTGAAGCGGCAGTGGCGGCGGCGGCGGCGGCTCGGCAGGCGGGTTCAGGCTTCGGGGGCCAGCCGCCGCCATGATCCTGCTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000420201.5 ENST00000489598.5 ENST00000491780.5 |
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| CDS TCA 90 bp | TGTTCACCTCCAGCAGGATCATGGCGGCGGCTGGCCCCCGAAGCCTaGACCCGCCTGCCGAGCCGCCGCCGCCGCCGCCACTGCCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: CSPPAGSWRRLAPEA*TRLPSRRRRRHCRF Trigger: GAAGCGGCAGTGGCGGCGGCGGCGGCGGCTCGGCAGGCGGGTTCAGGCTTCGGGGGCCAGCCGCCGCCATGATCCTGCTGGAGGTGAACA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000315717.10 ENST00000420201.5 ENST00000489598.5 ENST00000491780.5 |
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| CDS CCA 90 bp | GGAGGGAAGGGTAAGACGAACGCGCTGGCCCACGCACGCAGACTGTaGAGACACCCACCCACCCAACCGACCTGGCCCCCGAAGCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGKGKTNALAHARRL*RHPPTQPTWPPKPE Trigger: TTCAGGCTTCGGGGGCCAGGTCGGTTGGGTGGGTGGGTGTCTCCACAGTCTGCGTGCGTGGGCCAGCGCGTTCGTCTTACCCTTCCCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295685.14 |
||
| CDS TCA 90 bp | AATGTTACTTCTACTGCTTCCGGTTTGTTTCTGGCCCCCGAAGCCTaGACCCGCCTGCCGAGCCGCCGCCGCCGCCGCCACTGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NVTSTASGLFLAPEA*TRLPSRRRRRHCRF Trigger: GAAGCGGCAGTGGCGGCGGCGGCGGCGGCTCGGCAGGCGGGTTCAGGCTTCGGGGGCCAGAAACAAACCGGAAGCAGTAGAAGTAACATT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478612.5 |
||
| CDS GCA 90 bp | CTCGATGATGCGGTTGTTCACCTCCAGCAGGATCATGGCGGCGGCTaGCCCCAGGGGAAGGAGAAACAAGGGCCGGTGAGGGTGGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LDDAVVHLQQDHGGG*PQGKEKQGPVRVGK Trigger: CTTACCCACCCTCACCGGCCCTTGTTTCTCCTTCCCCTGGGGGCAGCCGCCGCCATGATCCTGCTGGAGGTGAACAACCGCATCATCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000295685.14 ENST00000420104.5 |
||
| CDS CCA 90 bp | GTCTTTCAGCTCCAGAGGAGGTTCCCTGTGGCTAAAGAGGACCTGTaGGGCTGTGTGGCTGGCTCTGCGTCCTTCTTTGAACTCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VFQLQRRFPVAKEDL*GCVAGSASFFELLH Trigger: ATGCAGGAGTTCAAAGAAGGACGCAGAGCCAGCCACACAGCCCCACAGGTCCTCTTTAGCCACAGGGAACCTCCTCTGGAGCTGAAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295685.14 ENST00000315717.10 ENST00000470146.5 ENST00000477992.1 |
||
| CDS CCA 90 bp | TCCAGAGGAGGTTCCCTGTGGCTAAAGAGGACCTGTGGGGCTGTGTaGCTGGCTCTGCGTCCTTCTTTGAACTCCTGCATGAACACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SRGGSLWLKRTCGAV*LALRPSLNSCMNTF Trigger: AAAGGTGTTCATGCAGGAGTTCAAAGAAGGACGCAGAGCCAGCCACACAGCCCCACAGGTCCTCTTTAGCCACAGGGAACCTCCTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000295685.14 ENST00000315717.10 ENST00000470146.5 ENST00000477992.1 |
||
| CDS-3UTR CAA 90 bp | GAACACCTTTCCAATGACCACATCGTCGTCATCCTTAAACACTGTGCTGAAGACGCCGCGTTCTCGAACTaGAGCGCGAGCGTCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EHLSNDHIVVILKHCAEDAAFSN*SASVSS Trigger: CGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGGC...GTCTTCAGCACAGTGTTTAAGGATGACGACGATGTGGTCATTGGAAAGGTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414983.5 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTGCCGCGTTCTCGAACTaGAGCGCGAGCGTCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RGKTISLQHASLMHNGILAAFSN*SASVSS Trigger: CGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGGC...AAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
||
| CDS-3UTR CAA 90 bp | ACATCGTCGTCATCCTTAAACACTGTGCTGAAGACTACTGTGACTCTGTCCTTTTCTACTGCTTCCGGTTaGTTTCCGGCGGCCGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSSSSLNTVLKTTVTLSFSTASG*FPAAAF Trigger: GAACGCGGCCGCCGGAAACAAACCGGAAGCAGTAGA...AAAGGACAGAGTCACAGTAGTCTTCAGCACAGTGTTTAAGGATGACGACGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414983.5 |
||
| CDS CCA 90 bp | TACGCTCATGGTATGTTTGGGTGCAAAGGTATAAGTCGCCATGCATaGGTTTCCCCCAAGATGTCTGCTCCATACCTGCATGAACACCTT | + |
|
Preference number: 5 (lower is better) Translates to: YAHGMFGCKGISRHA*VSPKMSAPYLHEHL Trigger: AAGGTGTTCATGCAGGTATGGAGCAGACATCTTGGGGGAAACCCATGCATGGCGACTTATACCTTTGCACCCAAACATACCATGAGCGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462034.1 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTTCCTCGATGATGCGGTaGTTCACCTCCAGCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RGKTISLQHASLMHNGILSSMMR*FTSSRI Trigger: GATCCTGCTGGAGGTGAACAACCGCATCATCGAGGA...AAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
||
| CDS TCA 90 bp | CCACCATCTGTCAGCTCTCAGTATCTGGAGAGTAGGAGGAGTGGCTaGTTTCTGCCCTATCATCTACTTCCTGGCTTAAGACATTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: PPSVSSQYLESRRSG*FLPYHLLPGLRHFM Trigger: CATAAAATGTCTTAAGCCAGGAAGTAGATGATAGGGCAGAAATCAGCCACTCCTCCTACTCTCCAGATACTGAGAGCTGACAGATGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465395.5 |
||
| CDS-3UTR CAA 90 bp | ATGCCACTGAATCACAGGGTAAAAAGGCTGTTCAGTTTTTCCACTTTAAACCTCTCCTCGATGATGCGGTaGTTCACCTCCAGCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: MPLNHRVKRLFSFSTLNLSSMMR*FTSSRI Trigger: GATCCTGCTGGAGGTGAACAACCGCATCATCGAGGA...GAGGTTTAAAGTGGAAAAACTGAACAGCCTTTTTACCCTGTGATTCAGTGGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000420201.5 |
||
| CDS TCA 90 bp | GGGTACTGGTTCTCACTTTGGGGTCCTGCTAAATGCCTCAGAATTTaGGACATGCCACTGAATCACAGGGTAAAAAGGCTGTTCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GYWFSLWGPAKCLRI*DMPLNHRVKRLFSF Trigger: AAAACTGAACAGCCTTTTTACCCTGTGATTCAGTGGCATGTCTCAAATTCTGAGGCATTTAGCAGGACCCCAAAGTGAGAACCAGTACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484961.1 |
||
| CDS CCA 90 bp | CTGCCAATGAAAGGTGAGGAAACAAGAGTCCCAAGGAAAATGATGTaGATCTTACCTCATCAGCACCATGTGCCTGAAGTTCCTTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPMKGEETRVPRKMM*ILPHQHHVPEVPCR Trigger: TCTACAAGGAACTTCAGGCACATGGTGCTGATGAGGTAAGATCCACATCATTTTCCTTGGGACTCTTGTTTCCTCACCTTTCATTGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471355.5 |
||
| CDS-3UTR CAA 90 bp | CTTCAACATGCCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGATTTTCTGCACAATGGAATCCTaGGATGCCGGAAGATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQHASLMHNGILGCRKIFCTMES*DAGRFS Trigger: TGAAAATCTTCCGGCATCCAAGGATTCCATTGTGCA...GAAAATCTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
||
| CDS TCA 90 bp | ACTACCTGGTTCTCACTTTGGGGTCCTGCTAAATGCCTCAGAATTTaGGACATGCCACTGAATCACAGGGTAAAAAGGCTGTTCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTWFSLWGPAKCLRI*DMPLNHRVKRLFSF Trigger: AAAACTGAACAGCCTTTTTACCCTGTGATTCAGTGGCATGTCTCAAATTCTGAGGCATTTAGCAGGACCCCAAAGTGAGAACCAGGTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489598.5 |
||
| CDS-3UTR CAA 90 bp | AACAGCACTTCAGAGCTGCAAAAGTCTTCCAAGATCATCTTGTCGAGGACTCTTTGCACAATGGAATCCTaGGATGCCGGAAGATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NSTSELQKSSKIILSRTLCTMES*DAGRFS Trigger: TGAAAATCTTCCGGCATCCAAGGATTCCATTGTGCA...AAGAGTCCTCGACAAGATGATCTTGGAAGACTTTTGCAGCTCTGAAGTGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414983.5 |
||
| CDS-3UTR CAA 90 bp | GAACACCTTTCCAATGACCACATCGTCGTCATCCTTAAACACTGTGCTGAAGACTCTTCCAAGATCATCTaGTCGAGGACTCTTGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: EHLSNDHIVVILKHCAEDSSKII*SRTLVV Trigger: TACAACAAGAGTCCTCGACAAGATGATCTTGGAAGA...GTCTTCAGCACAGTGTTTAAGGATGACGACGATGTGGTCATTGGAAAGGTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414983.5 |
||
| CDS TCA 90 bp | TTAGTGCCATGGATCTTCCATGAATGGCAAACTGCCAATGAAAGGTaGGGAAACAAGAGTCCCAAGGAAAATGATGTGGATCTTACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVPWIFHEWQTANER*GNKSPKENDVDLTS Trigger: TGAGGTAAGATCCACATCATTTTCCTTGGGACTCTTGTTTCCTCACCTTTCATTGGCAGTTTGCCATTCATGGAAGATCCATGGCACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471355.5 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTCTTCAACATGCCAGCTaGATGCACAATGGAATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGKTISLQHASLMHNGILLQHAS*MHNGIL Trigger: AAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAG...AAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
||
| CDS-3UTR CAA 90 bp | CACCTTTCCAATGACCACATCGTCGTCATCCTTAAACACTGTGCTGAAGACTACTTCCTTGCCCTCTTCTaGGAATTGGAAGTATTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLSNDHIVVILKHCAEDYFLALF*ELEVFF Trigger: GAAAAATACTTCCAATTCCAAGAAGAGGGCAAGGAA...GTAGTCTTCAGCACAGTGTTTAAGGATGACGACGATGTGGTCATTGGAAAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414983.5 |
||
| CDS-3UTR CAA 90 bp | ATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTGGATGCCGGAAGTATAGCAAAGAGACATaGTATCCTGGTTCTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: ISLQHASLMHNGILGCRKYSKET*YPGSHF Trigger: AAAGTGAGAACCAGGATACAATGTCTCTTTGCTATA...CTTCCGGCATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420201.5 |
||
| CDS CCA 90 bp | AATATAGGCCTGGGAACAAACATAACAGGTACTAAAGCACAGTCATaGTCTAGAAAGACAGCTTTGCTGTCTTTCATCAGAGAGGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: NIGLGTNITGTKAQS*SRKTALLSFIREVI Trigger: GATGACCTCTCTGATGAAAGACAGCAAAGCTGTCTTTCTAGACCATGACTGTGCTTTAGTACCTGTTATGTTTGTTCCCAGGCCTATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487321.1 |
||
| CDS-3UTR CAA 90 bp | GACATGCCACTGAATCACAGGGTAAAAAGGCTGTTCAGTTTTTCCACTTTAAACCTTCAACATGCCAGCTaGATGCACAATGGAATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DMPLNHRVKRLFSFSTLNLQHAS*MHNGIL Trigger: AAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAG...GTTTAAAGTGGAAAAACTGAACAGCCTTTTTACCCTGTGATTCAGTGGCATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000420201.5 |
||
| CDS TCA 90 bp | TTCAAGGATGACACGGTGCCTTTCAATTCCTCTGGCCATGAATGTTaGGACAACCTATTAGAAGACTGGATTAAGAAAGGGTCTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: FKDDTVPFNSSGHEC*DNLLEDWIKKGSDF Trigger: AAAATCAGACCCTTTCTTAATCCAGTCTTCTAATAGGTTGTCTCAACATTCATGGCCAGAGGAATTGAAAGGCACCGTGTCATCCTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489598.5 |
||
| CDS-3UTR CAA 90 bp | CAAAACAATTTCGCTTCAACATGCCAGCTTGATGCACAATGGAATCCTTGGATGTTCCTTGCCCTCTTCTaGGAATTGGAAGTATTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QNNFASTCQLDAQWNPWMFLALF*ELEVFF Trigger: GAAAAATACTTCCAATTCCAAGAAGAGGGCAAGGAA...CATCCAAGGATTCCATTGTGCATCAAGCTGGCATGTTGAAGCGAAATTGTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000414983.5 ENST00000420201.5 |
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| CDS TCA 90 bp | TGGTTGAGACACTACTTTCACACACTTTTACATTTCACACTTCTATaGAGACAGGGTCTGCAATCTGGCAATGTCTATGATTTAGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WLRHYFHTLLHFTLL*RQGLQSGNVYDLVG Trigger: TCCCACTAAATCATAGACATTGCCAGATTGCAGACCCTGTCTTCATAGAAGTGTGAAATGTAAAAGTGTGTGAAAGTAGTGTCTCAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477992.1 |
||
| CDS TCA 72 bp | CCAGCAGGATCATGGCGGCGGCTGGCCCCCGAAGCCTaGACCCGCCTGCCGAGCCGCCGCCGCCGCCGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PAGSWRRLAPEA*TRLPSRRRRRH Trigger: GTGGCGGCGGCGGCGGCGGCTCGGCAGGCGGGTTCAGGCTTCGGGGGCCAGCCGCCGCCATGATCCTGCTGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000315717.10 ENST00000414983.5 ENST00000420201.5 ENST00000489598.5 ENST00000491780.5 |
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| CDS GCA 72 bp | CATGGCGGCGGCTGGCCCCCGAAGCCTGAACCCGCCTaGCGAGCCGCCGCCGCCGCCGCCACTGCCGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HGGGWPPKPEPA*RAAAAAATAAS Trigger: TGAAGCGGCAGTGGCGGCGGCGGCGGCGGCTCGGCAGGCGGGTTCAGGCTTCGGGGGCCAGCCGCCGCCATG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000315717.10 ENST00000420201.5 ENST00000489598.5 ENST00000491780.5 |
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| CDS GCA 72 bp | CCTGAGTGGGGCTGGCCCCCGAAGCCTGAACCCGCCTaGCGAGCCGCCGCCGCCGCCGCCACTGCCGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PEWGWPPKPEPA*RAAAAAATAAS Trigger: TGAAGCGGCAGTGGCGGCGGCGGCGGCGGCTCGGCAGGCGGGTTCAGGCTTCGGGGGCCAGCCCCACTCAGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420104.5 |
||
| CDS GCA 72 bp | CCGGTTTGTTTCTGGCCCCCGAAGCCTGAACCCGCCTaGCGAGCCGCCGCCGCCGCCGCCACTGCCGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PVCFWPPKPEPA*RAAAAAATAAS Trigger: TGAAGCGGCAGTGGCGGCGGCGGCGGCGGCTCGGCAGGCGGGTTCAGGCTTCGGGGGCCAGAAACAAACCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478612.5 |
||
| CDS CCA 72 bp | GCGGTTGTTCACCTCCAGCAGGATCATGGCGGCGGCTaGCCCCCGAAGCCTGAACCCGCCTGCCGAGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: AVVHLQQDHGGG*PPKPEPACRAA Trigger: GGCGGCTCGGCAGGCGGGTTCAGGCTTCGGGGGCCAGCCGCCGCCATGATCCTGCTGGAGGTGAACAACCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000315717.10 ENST00000414983.5 ENST00000420201.5 ENST00000489598.5 ENST00000491780.5 |
||
| CDS TCA 72 bp | TCTACTGCTTCCGGTTTGTTTCTGGCCCCCGAAGCCTaGACCCGCCTGCCGAGCCGCCGCCGCCGCCGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: STASGLFLAPEA*TRLPSRRRRRH Trigger: GTGGCGGCGGCGGCGGCGGCTCGGCAGGCGGGTTCAGGCTTCGGGGGCCAGAAACAAACCGGAAGCAGTAGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000478612.5 ENST00000480062.5 |
||
| CDS CCA 72 bp | GGTAAGACGAACGCGCTGGCCCACGCACGCAGACTGTaGAGACACCCACCCACCCAACCGACCTGGCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GKTNALAHARRL*RHPPTQPTWPP Trigger: CGGGGGCCAGGTCGGTTGGGTGGGTGGGTGTCTCCACAGTCTGCGTGCGTGGGCCAGCGCGTTCGTCTTACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295685.14 |
||
| CDS CCA 72 bp | GGGGCCGGGGTGGAGGGAAGGGTAAGACGAACGCGCTaGCCCACGCACGCAGACTGTGGAGACACCCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: GAGVEGRVRRTR*PTHADCGDTHP Trigger: TGGGTGGGTGTCTCCACAGTCTGCGTGCGTGGGCCAGCGCGTTCGTCTTACCCTTCCCTCCACCCCGGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295685.14 |
||
| CDS GCA 72 bp | GCGGTTGTTCACCTCCAGCAGGATCATGGCGGCGGCTaGCCCCAGGGGAAGGAGAAACAAGGGCCGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVVHLQQDHGGG*PQGKEKQGPVR Trigger: CCTCACCGGCCCTTGTTTCTCCTTCCCCTGGGGGCAGCCGCCGCCATGATCCTGCTGGAGGTGAACAACCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000295685.14 ENST00000420104.5 |
||
| CDS CAA 90 bp | GCCGCGTTCTCGAACTTGAGCGCGAGCGTCTCCTCGATGATGCGGTaGTTCACCTCCAGCAGGATCATGGCGGCGGCTGCCCCCAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AAFSNLSASVSSMMR*FTSSRIMAAAAPRG Trigger: TCCCCTGGGGGCAGCCGCCGCCATGATCCTGCTGGAGGTGAACAACCGCATCATCGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000295685.14 ENST00000420104.5 |
||
| CDS CAA 90 bp | GCCGCGTTCTCGAACTTGAGCGCGAGCGTCTCCTCGATGATGCGGTaGTTCACCTCCAGCAGGATCATGGCGGCGGCTGGCCCCCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AAFSNLSASVSSMMR*FTSSRIMAAAGPRS Trigger: GCTTCGGGGGCCAGCCGCCGCCATGATCCTGCTGGAGGTGAACAACCGCATCATCGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000315717.10 ENST00000414983.5 ENST00000420201.5 ENST00000489598.5 ENST00000491780.5 |
||
| CDS CAA 72 bp | TCGAACTTGAGCGCGAGCGTCTCCTCGATGATGCGGTaGTTCACCTCCAGCAGGATCATGGCGGCGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SNLSASVSSMMR*FTSSRIMAAAA Trigger: GGCAGCCGCCGCCATGATCCTGCTGGAGGTGAACAACCGCATCATCGAGGAGACGCTCGCGCTCAAGTTCGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295685.14 ENST00000420104.5 ENST00000465395.5 |
||
| CDS CAA 72 bp | TCGAACTTGAGCGCGAGCGTCTCCTCGATGATGCGGTaGTTCACCTCCAGCAGGATCATGGCGGCGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SNLSASVSSMMR*FTSSRIMAAAG Trigger: GCCAGCCGCCGCCATGATCCTGCTGGAGGTGAACAACCGCATCATCGAGGAGACGCTCGCGCTCAAGTTCGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000315717.10 ENST00000414983.5 ENST00000420201.5 ENST00000489598.5 ENST00000491780.5 |
||
| CDS CAA 72 bp | GCTTCCGGTTTGTTTCCGGCGGCCGCGTTCTCGAACTaGAGCGCGAGCGTCTCCTCGATGATGCGGTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASGLFPAAAFSN*SASVSSMMRLF Trigger: GAACAACCGCATCATCGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGGCCGCCGGAAACAAACCGGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000295685.14 ENST00000315717.10 ENST00000414983.5 ENST00000420104.5 ENST00000420201.5 ENST00000465395.5 ENST00000489598.5 ENST00000491780.5 |
||
| CDS CCA 72 bp | CTGCAAATGTTACTTCTACTGCTTCCGGTTTGTTTCTaGCCCCCGAAGCCTGAACCCGCCTGCCGAGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LQMLLLLLPVCF*PPKPEPACRAA Trigger: GGCGGCTCGGCAGGCGGGTTCAGGCTTCGGGGGCCAGAAACAAACCGGAAGCAGTAGAAGTAACATTTGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000478612.5 ENST00000480062.5 |
||
| CDS CCA 72 bp | GGTTCCCTGTGGCTAAAGAGGACCTGTGGGGCTGTGTaGCTGGCTCTGCGTCCTTCTTTGAACTCCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: GSLWLKRTCGAV*LALRPSLNSCM Trigger: CATGCAGGAGTTCAAAGAAGGACGCAGAGCCAGCCACACAGCCCCACAGGTCCTCTTTAGCCACAGGGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000295685.14 ENST00000315717.10 ENST00000470146.5 ENST00000477992.1 |
||
| CDS CCA 72 bp | CTCCAGAGGAGGTTCCCTGTGGCTAAAGAGGACCTGTaGGGCTGTGTGGCTGGCTCTGCGTCCTTCTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LQRRFPVAKEDL*GCVAGSASFFE Trigger: TTCAAAGAAGGACGCAGAGCCAGCCACACAGCCCCACAGGTCCTCTTTAGCCACAGGGAACCTCCTCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295685.14 ENST00000315717.10 ENST00000470146.5 ENST00000477992.1 |
||
| CDS TCA 72 bp | TTTTCTCGGCATCTGGGCGTGCGCGGTTCAGCACCTTaGGGAAGTCAGACGTTTTCGCCCGCATACGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FSRHLGVRGSAP*GSQTFSPAYVC Trigger: ACACACGTATGCGGGCGAAAACGTCTGACTTCCTCAAGGTGCTGAACCGCGCACGCCCAGATGCCGAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000295685.14 ENST00000315717.10 ENST00000456575.1 ENST00000470146.5 ENST00000477992.1 ENST00000487321.1 |
||
| CDS CAA 72 bp | TTTTTCTCGGCATCTGGGCGTGCGCGGTTCAGCACCTaGAGGAAGTCAGACGTTTTCGCCCGCATACGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FFSASGRARFST*RKSDVFARIRV Trigger: CACACGTATGCGGGCGAAAACGTCTGACTTCCTCAAGGTGCTGAACCGCGCACGCCCAGATGCCGAGAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000295685.14 ENST00000315717.10 ENST00000456575.1 ENST00000470146.5 ENST00000477992.1 ENST00000487321.1 |
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| CDS TCA 72 bp | GGTAGTGCAGGTAGTCCCGGAACGTGTGGATCAGGTTaGTGGTGTTGTCTCGAGCACTGGCATTGGTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: GSAGSPGTCGSG*WCCLEHWHWCD Trigger: GTCACACCAATGCCAGTGCTCGAGACAACACCATCAACCTGATCCACACGTTCCGGGACTACCTGCACTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000295685.14 ENST00000315717.10 ENST00000456575.1 ENST00000470146.5 ENST00000477992.1 |
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| CDS CAA 72 bp | CCAACTCTCTGGGAGGCGGAGGCTGAGGTGGGTAGATaGCTCAAGGCTAGGAGTTTGAGACCTCCTTACTCT | + |
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Preference number: 6 (lower is better) Translates to: PTLWEAEAEVGR*LKARSLRPPYS Trigger: AGAGTAAGGAGGTCTCAAACTCCTAGCCTTGAGCAATCTACCCACCTCAGCCTCCGCCTCCCAGAGAGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477992.1 |
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| CDS CAA 90 bp | CCTGTGATCCCAACTCTCTGGGAGGCGGAGGCTGAGGTGGGTAGATaGCTCAAGGCTAGGAGTTTGAGACCTCCTTACTCTGTTTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PVIPTLWEAEAEVGR*LKARSLRPPYSVLA Trigger: TGCCAAAACAGAGTAAGGAGGTCTCAAACTCCTAGCCTTGAGCAATCTACCCACCTCAGCCTCCGCCTCCCAGAGAGTTGGGATCACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477992.1 |
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| CDS CAA 90 bp | AAAGACAGCTTTGCTGTCTTTCATCAGAGAGGTCATCAAGGGCGGTaGGGAACATACACCCTGGGATTGACCCAGGCCCTGCAGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: KDSFAVFHQRGHQGR*GTYTLGLTQALQGS Trigger: GCTTCCCTGCAGGGCCTGGGTCAATCCCAGGGTGTATGTTCCCAACCGCCCTTGATGACCTCTCTGATGAAAGACAGCAAAGCTGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487321.1 |
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| CDS CAA 72 bp | TTTGCTGTCTTTCATCAGAGAGGTCATCAAGGGCGGTaGGGAACATACACCCTGGGATTGACCCAGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: FAVFHQRGHQGR*GTYTLGLTQAL Trigger: CAGGGCCTGGGTCAATCCCAGGGTGTATGTTCCCAACCGCCCTTGATGACCTCTCTGATGAAAGACAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487321.1 |
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| CDS GCA 72 bp | CCTCTGAGTTCATTCACCTGCAAATGTTACTTCTACTaGTTCCGGTTTGTTTCCGGCGGCCGCGTTCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: PLSSFTCKCYFY*FRFVSGGRVLE Trigger: TTCGAGAACGCGGCCGCCGGAAACAAACCGGAAGCAGTAGAAGTAACATTTGCAGGTGAATGAACTCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414983.5 |
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| CDS CAA 72 bp | GAGGCTGAGGTGGGTAGATTGCTCAAGGCTAGGAGTTaGAGACCTCCTTACTCTGTTTTGGCAGTATGGGCA | + |
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Preference number: 6 (lower is better) Translates to: EAEVGRLLKARS*RPPYSVLAVWA Trigger: TGCCCATACTGCCAAAACAGAGTAAGGAGGTCTCAAACTCCTAGCCTTGAGCAATCTACCCACCTCAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477992.1 |
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| CDS GCA 72 bp | ATGCATGGGTTTCCCCCAAGATGTCTGCTCCATACCTaGATGAACACCTTTCCAATGACCACATCGTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: MHGFPPRCLLHT*MNTFPMTTSSS Trigger: TGACGACGATGTGGTCATTGGAAAGGTGTTCATGCAGGTATGGAGCAGACATCTTGGGGGAAACCCATGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462034.1 |
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| CDS CCA 72 bp | GGTATGTTTGGGTGCAAAGGTATAAGTCGCCATGCATaGGTTTCCCCCAAGATGTCTGCTCCATACCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: GMFGCKGISRHA*VSPKMSAPYLH Trigger: ATGCAGGTATGGAGCAGACATCTTGGGGGAAACCCATGCATGGCGACTTATACCTTTGCACCCAAACATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462034.1 |
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| CDS TCA 72 bp | GTCAGCTCTCAGTATCTGGAGAGTAGGAGGAGTGGCTaGTTTCTGCCCTATCATCTACTTCCTGGCTTAAGA | + |
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Preference number: 6 (lower is better) Translates to: VSSQYLESRRSG*FLPYHLLPGLR Trigger: TCTTAAGCCAGGAAGTAGATGATAGGGCAGAAATCAGCCACTCCTCCTACTCTCCAGATACTGAGAGCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465395.5 |
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| CDS GCA 72 bp | TCATGGTATGTTTGGGTGCAAAGGTATAAGTCGCCATaGATGGGTTTCCCCCAAGATGTCTGCTCCATACCT | + |
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Preference number: 6 (lower is better) Translates to: SWYVWVQRYKSP*MGFPQDVCSIP Trigger: AGGTATGGAGCAGACATCTTGGGGGAAACCCATGCATGGCGACTTATACCTTTGCACCCAAACATACCATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462034.1 |
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| CDS CAA 72 bp | CTCAAGGCTAGGAGTTTGAGACCTCCTTACTCTGTTTaGGCAGTATGGGCAGCAGACAGTGAGACTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LKARSLRPPYSV*AVWAADSETLF Trigger: AAACAGAGTCTCACTGTCTGCTGCCCATACTGCCAAAACAGAGTAAGGAGGTCTCAAACTCCTAGCCTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477992.1 |
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| CDS CAA 72 bp | GGTACTAAAGCACAGTCATGGTCTAGAAAGACAGCTTaGCTGTCTTTCATCAGAGAGGTCATCAAGGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: GTKAQSWSRKTA*LSFIREVIKGG Trigger: ACCGCCCTTGATGACCTCTCTGATGAAAGACAGCAAAGCTGTCTTTCTAGACCATGACTGTGCTTTAGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487321.1 |
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| CDS CAA 90 bp | GGTAGATTGCTCAAGGCTAGGAGTTTGAGACCTCCTTACTCTGTTTaGGCAGTATGGGCAGCAGACAGTGAGACTCTGTTTCTACAAAAT | + |
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Preference number: 6 (lower is better) Translates to: GRLLKARSLRPPYSV*AVWAADSETLFLQN Trigger: ATTTTGTAGAAACAGAGTCTCACTGTCTGCTGCCCATACTGCCAAAACAGAGTAAGGAGGTCTCAAACTCCTAGCCTTGAGCAATCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477992.1 |
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| CDS CAA 90 bp | AACATAACAGGTACTAAAGCACAGTCATGGTCTAGAAAGACAGCTTaGCTGTCTTTCATCAGAGAGGTCATCAAGGGCGGTTGGGAACAT | + |
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Preference number: 6 (lower is better) Translates to: NITGTKAQSWSRKTA*LSFIREVIKGGWEH Trigger: ATGTTCCCAACCGCCCTTGATGACCTCTCTGATGAAAGACAGCAAAGCTGTCTTTCTAGACCATGACTGTGCTTTAGTACCTGTTATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487321.1 |
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| CDS TCA 72 bp | GACACGGTGCCTTTCAATTCCTCTGGCCATGAATGTTaGGACAACCTATTAGAAGACTGGATTAAGAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: DTVPFNSSGHEC*DNLLEDWIKKG Trigger: CCCTTTCTTAATCCAGTCTTCTAATAGGTTGTCTCAACATTCATGGCCAGAGGAATTGAAAGGCACCGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489598.5 |
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| CDS CCA 72 bp | AGGAGTTTGAGACCTCCTTACTCTGTTTTGGCAGTATaGGCAGCAGACAGTGAGACTCTGTTTCTACAAAAT | + |
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Preference number: 6 (lower is better) Translates to: RSLRPPYSVLAV*AADSETLFLQN Trigger: ATTTTGTAGAAACAGAGTCTCACTGTCTGCTGCCCATACTGCCAAAACAGAGTAAGGAGGTCTCAAACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477992.1 |
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| CDS TCA 72 bp | GTGGATTTAGTCACCAAACAAGTCACAAAACTGAGATaGGTATCTTTTTATGCCTGGGACAGAGTGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: VDLVTKQVTKLR*VSFYAWDRVQW Trigger: CCATTGCACTCTGTCCCAGGCATAAAAAGATACTCATCTCAGTTTTGTGACTTGTTTGGTGACTAAATCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470146.5 |
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| CDS GCA 72 bp | TTGACTTGTAAATATAACATGGACCTATGGTCACCCTaGCTGCTGATTATCCAGGCTATACTCTTAAACATG | + |
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Preference number: 6 (lower is better) Translates to: LTCKYNMDLWSP*LLIIQAILLNM Trigger: CATGTTTAAGAGTATAGCCTGGATAATCAGCAGGCAGGGTGACCATAGGTCCATGTTATATTTACAAGTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465395.5 |
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| CDS CAA 72 bp | TTTTTAAAGTACTGCACTTGCCAAGCTCTTCCTAAGTaGGCATTCTTCCTAACTTTCATTTGGTGGATGGGA | + |
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Preference number: 6 (lower is better) Translates to: FLKYCTCQALPK*AFFLTFIWWMG Trigger: TCCCATCCACCAAATGAAAGTTAGGAAGAATGCCAACTTAGGAAGAGCTTGGCAAGTGCAGTACTTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000470146.5 |
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| CDS TCA 72 bp | CACTACTTTCACACACTTTTACATTTCACACTTCTATaGAGACAGGGTCTGCAATCTGGCAATGTCTATGAT | + |
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Preference number: 6 (lower is better) Translates to: HYFHTLLHFTLL*RQGLQSGNVYD Trigger: ATCATAGACATTGCCAGATTGCAGACCCTGTCTTCATAGAAGTGTGAAATGTAAAAGTGTGTGAAAGTAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477992.1 |
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