RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARPC1B (Homo sapiens)

Ensembl gene IDs: ENSG00000130429

Ensembl transcript IDs: ENST00000414376.5, ENST00000417330.6, ENST00000418347.6, ENST00000427217.6, ENST00000429246.6, ENST00000431816.6, ENST00000432343.1, ENST00000443222.6, ENST00000445924.5, ENST00000451682.5, ENST00000455009.6, ENST00000458033.6, ENST00000463078.1, ENST00000468337.1, ENST00000481997.5, ENST00000484375.5, ENST00000491294.1, ENST00000493403.1, ENST00000645391.1, ENST00000646101.2

Found 497 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CTCGTTGGGGGCCCAGCGCACGCAGCGGGCAGCCCGGTTGATCCGCAGGATGACGCGTGGGCTTCCATGTaGGGCCCTTCAGCGTCCACA +
Preference number: 2 (lower is better)
Translates to: LVGGPAHAAGSPVDPQDDAWASM*GPSAST
Trigger: TGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGC...GTCATCCTGCGGATCAACCGGGCTGCCCGCTGCGTGCGCTGGGCCCCCAACGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445924.5
3UTR CAA 90 bp AACTTGTTCTCGTTGGGGGCCCAGCGCACGCAGCGGGCAGCCCGGTaGATCCGCAGGATGACCAGCGTGGGCTTCCATGTGCGGCCCTTC +
Preference number: 2 (lower is better)
Translates to: NLFSLGAQRTQRAAR*IRRMTSVGFHVRPF
Trigger: GAAGGGCCGCACATGGAAGCCCACGCTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTGCGTGCGCTGGGCCCCCAACGAGAACAAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445924.5
3UTR-3UTR GCA 90 bp GTGCCGCAGGTCACAATACGGTTACTCTCGGGGGCCCAGTCGATGCCTGTCACCTCTCCTCTTCTGCCTTaGAGGGGCCCCCTGAAGTCC +
Preference number: 2 (lower is better)
Translates to: VPQVTIRLLSGAQSMPVTSPLLP*RGPLKS
Trigger: GGACTTCAGGGGGCCCCTGCAAGGCAGAAGAGGAGA...GGTGACAGGCATCGACTGGGCCCCCGAGAGTAACCGTATTGTGACCTGCGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445924.5
3UTR-3UTR CCA 90 bp GATCCGCAGGATGACCAGCGTGGGCTTCCATGTGCGGCCCTTCAGCGTCCACACGCACCTTGGTCCATTTaGCACCGCTCTTTTCATAGA +
Preference number: 2 (lower is better)
Translates to: DPQDDQRGLPCAALQRPHAPWSI*HRSFHR
Trigger: TCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGC...GTGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGCTGGTCATCCTGCGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445924.5
3UTR-3UTR TCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCCCCCAGCAGCTAGGATaGAGGCAACATATTCCTCAC +
Preference number: 2 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSPQQLG*RQHIPH
Trigger: GTGAGGAATATGTTGCCTTCATCCTAGCTGCTGGGG...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
3UTR-3UTR CCA 90 bp AGCCGCAGCTACTGCTGGATTCGAACATCAGTTCCCCAAAGGGCATCTTGGAGCGCTCGAAATAACAGATaGAGATCACACGAGAGCCGC +
Preference number: 2 (lower is better)
Translates to: SRSYCWIRTSVPQRASWSARNNR*RSHESR
Trigger: GCGGCTCTCGTGTGATCTCCATCTGTTATTTCGAGC...GCTCCAAGATGCCCTTTGGGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445924.5
3UTR-3UTR TCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCCCCCAGCAGCTAGGATaGAGGCAACATATTCCTCAC +
Preference number: 2 (lower is better)
Translates to: RIGTPETFSKATISLPDPPQQLG*RQHIPH
Trigger: GTGAGGAATATGTTGCCTTCATCCTAGCTGCTGGGG...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
52% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
3UTR-3UTR TCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGAGGTCCTTCAAGGCTaGCTCCAAGCTCTTCACATC +
Preference number: 2 (lower is better)
Translates to: WELVLVPQKHSAKQPLASEVLQG*LQALHI
Trigger: GATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTC...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443222.6
3UTR-3UTR TCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTACCCCAGCAGCTAGGATaGAGGCAACATATTCCTCAC +
Preference number: 2 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLPQQLG*RQHIPH
Trigger: GTGAGGAATATGTTGCCTTCATCCTAGCTGCTGGGG...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
3UTR-3UTR TCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCCCAGCAGCTAGGATaGAGGCAACATATTCCTCAC +
Preference number: 2 (lower is better)
Translates to: MGTRIGTPETFSKATISLPQQLG*RQHIPH
Trigger: GTGAGGAATATGTTGCCTTCATCCTAGCTGCTGGGG...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
3UTR-3UTR CAA 90 bp GTGCCGCAGGTCACAATACGGTTACTCTCGGGGGCCCAGTCGATGCCTGTCACCCTCTCCTCTTCTGCCTaGCAGGGGCCCCCTGAAGTC +
Preference number: 3 (lower is better)
Translates to: VPQVTIRLLSGAQSMPVTLSSSA*QGPPEV
Trigger: GACTTCAGGGGGCCCCTGCAAGGCAGAAGAGGAGAG...GGTGACAGGCATCGACTGGGCCCCCGAGAGTAACCGTATTGTGACCTGCGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445924.5
3UTR-3UTR CAA 90 bp AGCCGCAGCTACTGCTGGATTCGAACATCAGTTCCCCAAAGGGCATCTTGGAGCGAGCGGATGGGCTTCTaGATGTGCTTGCAAACCCAC +
Preference number: 3 (lower is better)
Translates to: SRSYCWIRTSVPQRASWSERMGF*MCLQTH
Trigger: GTGGGTTTGCAAGCACATCAAGAAGCCCATCCGCTC...GCTCCAAGATGCCCTTTGGGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432343.1
ENST00000445924.5
3UTR-3UTR CAA 90 bp AGCCGCAGCTACTGCTGGATTCGAACATCAGTTCCCCAAAGGGCATCTTGGAGCTGCACCTCATGGTTGTaGGGGCAGATGGCAATCTCT +
Preference number: 3 (lower is better)
Translates to: SRSYCWIRTSVPQRASWSCTSWL*GQMAIS
Trigger: AGAGATTGCCATCTGCCCCAACAACCATGAGGTGCA...GCTCCAAGATGCCCTTTGGGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445924.5
3UTR-3UTR CAA 90 bp AGCCGCAGCTACTGCTGGATTCGAACATCAGTTCCCCAAAGGGCATCTTGGAGCATATGCACCTCATGGTaGTTGGGGCAGATGGCAATC +
Preference number: 3 (lower is better)
Translates to: SRSYCWIRTSVPQRASWSICTSW*LGQMAI
Trigger: GATTGCCATCTGCCCCAACAACCATGAGGTGCATAT...GCTCCAAGATGCCCTTTGGGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445924.5
3UTR-3UTR CAA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCACAGGTCATTTGATCTaGAGGTCCTTCAAGGCTGAC +
Preference number: 3 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLTGHLI*RSFKAD
Trigger: GTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGT...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443222.6
3UTR-3UTR CAA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAACTATGGGAACTCGTATaGGTACCCCAGAAACATTCA +
Preference number: 3 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKLWELV*VPQKHS
Trigger: TGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTGAGCCAAGATCGTGCCACGCCCCACGGGGTGGGTaGCGGCCGTTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: ENCSNPAGRGCREPRSCHAPRGG*RPFLHL
Trigger: GAGGTGGAGGAACGGCCGGCACCCACCCCGTGGGGC...GTGGCACGATCTTGGCTCACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432343.1
3UTR CAA 72 bp TCGTTGGGGGCCCAGCGCACGCAGCGGGCAGCCCGGTaGATCCGCAGGATGACCAGCGTGGGCTTCCATGTG +
Preference number: 4 (lower is better)
Translates to: SLGAQRTQRAAR*IRRMTSVGFHV
Trigger: CACATGGAAGCCCACGCTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTGCGTGCGCTGGGCCCCCAACGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR GCA 90 bp CTCGTTGGGGGCCCAGCGCACGCAGCGGGCAGCCCGGTTGATCCGCAGGATGACTCTCCTCTTCTGCCTTaGAGGGGCCCCCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LVGGPAHAAGSPVDPQDDSPLLP*RGPLKS
Trigger: GGACTTCAGGGGGCCCCTGCAAGGCAGAAGAGGAGA...GTCATCCTGCGGATCAACCGGGCTGCCCGCTGCGTGCGCTGGGCCCCCAACGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR TCA 90 bp ACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTTCCAGGCGTGGCAGCTaGTGGGCTCCACCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TWEAEAENCSNPAGRGCRSRRGS*WAPPGS
Trigger: GCTTCCTGGTGGAGCCCATCAGCTGCCACGCCTGGA...ACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR GCA 90 bp CCTCTCCCCGCTTCCCCAGCAGCTAGGATGAAGGCAACATATTCCTCACAGGTCGCGGCTAGCGAGCCCTaGAGCCCCGTCGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PLPASPAARMKATYSSQVAASEP*SPVGSQ
Trigger: CTGGCTGCCGACGGGGCTGCAGGGCTCGCTAGCCGC...GACCTGTGAGGAATATGTTGCCTTCATCCTAGCTGCTGGGGAAGCGGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR GCA 90 bp GGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTGAGCAGGCGTTGCGGTCTGTaGCGCAGGTCACAATACGGT +
Preference number: 4 (lower is better)
Translates to: GRLRQRTARTRQAEAAVSRRCGL*RRSQYG
Trigger: ACCGTATTGTGACCTGCGGCACAGACCGCAACGCCT...GCTCACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR GCA 90 bp GCAGCCCGGTTGATCCGCAGGATGACCAGCGTGGGCTTCCATGTGCGGCCCTTCTCCACACGTAGGCGTTaGGGTCTGTGCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AARLIRRMTSVGFHVRPFSTRRR*GLCRRS
Trigger: TGACCTGCGGCACAGACCGCAACGCCTACGTGTGGA...GAAGGGCCGCACATGGAAGCCCACGCTGGTCATCCTGCGGATCAACCGGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR GCA 90 bp CTACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGCGTGGGCTTCCATGTaGGGCCCTTCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQRTARTRQAEAAAWASM*GPSAST
Trigger: TGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGC...GGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR GCA 90 bp CACGCAGCGGGCAGCCCGGTTGATCCGCAGGATGACCAGCGTGGGCTTCCATGTGAACTGGCTGTCGGGTaGGGTCCTTGTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: HAAGSPVDPQDDQRGLPCELAVG*GPCSRR
Trigger: ACGCCTGGAACAAGGACCGCACCCGACAGCCAGTTC...ACATGGAAGCCCACGCTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTGAGTCCTTGTTCCAGGCGTaGCAGCTGATGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: WEAEAENCSNPAGRGCRESLFQA*QLMGST
Trigger: GGTGGAGCCCATCAGCTGCCACGCCTGGAACAAGGA...CTCACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR GCA 90 bp CTACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCTCCACACGTAGGCGTTaGGGTCTGTGCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLGRLRQRTARTRQAEAASTRRR*GLCRRS
Trigger: TGACCTGCGGCACAGACCGCAACGCCTACGTGTGGA...GGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR GCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCGCCCCACGGGGTGGGTaGCGGCCGTTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSAPRGG*RPFLHL
Trigger: GAGGTGGAGGAACGGCCGGCACCCACCCCGTGGGGC...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCAGCTACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCGGGCAGATGGCAATCTaGGTGCGGTCCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PATWEAEAENCSNPAGRGGQMAI*VRSLFQ
Trigger: CTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC...GCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGTAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR CCA 90 bp CCAGCTACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCGGTTGTTGGGGCAGATaGCAATCTGGGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: PATWEAEAENCSNPAGRGGCWGR*QSGCGP
Trigger: AGGACCGCACCCAGATTGCCATCTGCCCCAACAACC...GCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGTAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR CCA 90 bp CGCAGGTCACAATACGGTTACTCTCGGGGGCCCAGTCGATGCCTGTCACCTGCCCAAACTTGTTCTCGTTaGGGGCCCAGCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: RRSQYGYSRGPSRCLSPAQTCSR*GPSARS
Trigger: GCTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTG...GGCAGGTGACAGGCATCGACTGGGCCCCCGAGAGTAACCGTATTGTGACCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR CCA 90 bp GGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTGAGCAGCCGCAGCTACTGCTaGATTCGAACATCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: GRLRQRTARTRQAEAAVSSRSYC*IRTSVP
Trigger: GGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT...GCTCACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR CCA 90 bp CGGTCTGTGCCGCAGGTCACAATACGGTTACTCTCGGGGGCCCAGTCGATGCCTCACCCTGTCTTCTCCTaGAACTGGCTGTCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: RSVPQVTIRLLSGAQSMPHPVFS*NWLSGA
Trigger: CGCACCCGACAGCCAGTTCCAGGAGAAGACAGGGTG...AGGCATCGACTGGGCCCCCGAGAGTAACCGTATTGTGACCTGCGGCACAGACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR TCA 90 bp CACGCAGCGGGCAGCCCGGTTGATCCGCAGGATGACCAGCGTGGGCTTCCATGTAAAAGATCCGACACTTaGAGTCACAGGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: HAAGSPVDPQDDQRGLPCKRSDT*SHRSRQ
Trigger: CTGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTT...ACATGGAAGCCCACGCTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR GCA 90 bp CGCAGGTCACAATACGGTTACTCTCGGGGGCCCAGTCGATGCCTGTCACCTGCCAGGCGTTGCGGTCTGTaGCGCAGGTCACAATACGGT +
Preference number: 4 (lower is better)
Translates to: RRSQYGYSRGPSRCLSPARRCGL*RRSQYG
Trigger: ACCGTATTGTGACCTGCGGCACAGACCGCAACGCCT...GGCAGGTGACAGGCATCGACTGGGCCCCCGAGAGTAACCGTATTGTGACCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR GCA 90 bp CCAGCGTGGGCTTCCATGTGCGGCCCTTCAGCGTCCACACGTAGGCGTTGCGGTTCACACGAGAGCCGCTaGCCACAGCAAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PAWASMCGPSASTRRRCGSHESR*PQQTCS
Trigger: AGAACAAGTTTGCTGTGGGCAGCGGCTCTCGTGTGA...ACCGCAACGCCTACGTGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR GCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCGCCCCACGGGGTGGGTaGCGGCCGTTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLAPRGG*RPFLHL
Trigger: GAGGTGGAGGAACGGCCGGCACCCACCCCGTGGGGC...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCCCCACGGGGTGGGTaGCGGCCGTTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKAPRGG*RPFLHL
Trigger: GAGGTGGAGGAACGGCCGGCACCCACCCCGTGGGGC...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCAGCTACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCGCACCTCATGGTTGTTaGGGCAGATGGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: PATWEAEAENCSNPAGRGAPHGC*GRWQSG
Trigger: CCCAGATTGCCATCTGCCCCAACAACCATGAGGTGC...GCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGTAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR CCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCCCCGGCCGCGGACTCTaGGCAGTCGACGCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPPGRGL*AVDAPN
Trigger: GTTCGGCGCGTCGACTGCCCAGAGTCCGCGGCCGGG...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp ACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTAAAAGATCCGACACTTaGAGTCACAGGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: TWEAEAENCSNPAGRGCRKRSDT*SHRSRQ
Trigger: CTGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTT...ACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR GCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCCGGACGGCGGGTACTaGGGGCTCCGCGCTCACACG +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPPDGGY*GLRAHT
Trigger: CGTGTGAGCGCGGAGCCCGCAGTACCCGCCGTCCGG...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR GCA 90 bp AGCCGCAGCTACTGCTGGATTCGAACATCAGTTCCCCAAAGGGCATCTTGGAGCCGGGGGCCCAGTCGATaGCTGTCACCTGCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: SRSYCWIRTSVPQRASWSRGPSR*LSPARC
Trigger: ACAACGGGCAGGTGACAGGCATCGACTGGGCCCCCG...GCTCCAAGATGCCCTTTGGGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432343.1
ENST00000445924.5
CDS-3UTR GCA 90 bp CCAGCTACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTCACACGAGAGCCGCTaGCCACAGCAAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PATWEAEAENCSNPAGRGSHESR*PQQTCS
Trigger: AGAACAAGTTTGCTGTGGGCAGCGGCTCTCGTGTGA...GCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGTAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR GCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCGCCCCACGGGGTGGGTaGCGGCCGTTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTAPRGG*RPFLHL
Trigger: GAGGTGGAGGAACGGCCGGCACCCACCCCGTGGGGC...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CCAGCTACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCCCCAGCCGCAGCTACTaGTGGATTCGAACATCAGTT +
Preference number: 4 (lower is better)
Translates to: PATWEAEAENCSNPAGRGPSRSY*WIRTSV
Trigger: AACTGATGTTCGAATCCAGCAGTAGCTGCGGCTGGG...GCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGTAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR CCA 90 bp GGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTGAGCGCACCTTGGTCCATTTaGCACCGCTCTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: GRLRQRTARTRQAEAAVSAPWSI*HRSFHR
Trigger: TCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGC...GCTCACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR CCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCCCGGCCGCGGACTCTaGGCAGTCGACGCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSPGRGL*AVDAPN
Trigger: GTTCGGCGCGTCGACTGCCCAGAGTCCGCGGCCGGG...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GATCCGCAGGATGACCAGCGTGGGCTTCCATGTGCGGCCCTTCAGCGTCCACACAGCCGCAGCTACTGCTaGATTCGAACATCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: DPQDDQRGLPCAALQRPHSRSYC*IRTSVP
Trigger: GGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT...GTGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGCTGGTCATCCTGCGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR CCA 90 bp TGTGCCGCAGGTCACAATACGGTTACTCTCGGGGGCCCAGTCGATGCCTGTCACGTCTTCTCCTGGAACTaGCTGTCGGGTGCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: CAAGHNTVTLGGPVDACHVFSWN*LSGAVL
Trigger: AAGGACCGCACCCGACAGCCAGTTCCAGGAGAAGAC...GTGACAGGCATCGACTGGGCCCCCGAGAGTAACCGTATTGTGACCTGCGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR TCA 90 bp GCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTGAGCCAAGAGTTCCTCCACCTCCTTaGTGTAGGCTGAAAAGATCC +
Preference number: 4 (lower is better)
Translates to: AEAENCSNPAGRGCREPRVPPPP*CRLKRS
Trigger: GGATCTTTTCAGCCTACATCAAGGAGGTGGAGGAAC...TCTTGGCTCACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR GCA 90 bp CCATTTGGCACCGCTCTTTTCATAGATATGCACCTCATGGTTGTTGGGGCAGATGCCCCACGGGGTGGGTaGCGGCCGTTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: PFGTALFIDMHLMVVGADAPRGG*RPFLHL
Trigger: GAGGTGGAGGAACGGCCGGCACCCACCCCGTGGGGC...ATCTGCCCCAACAACCATGAGGTGCATATCTATGAAAAGAGCGGTGCCAAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR GCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACGCCCCACGGGGTGGGTaGCGGCCGTTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDAPRGG*RPFLHL
Trigger: GAGGTGGAGGAACGGCCGGCACCCACCCCGTGGGGC...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GTGCCGCAGGTCACAATACGGTTACTCTCGGGGGCCCAGTCGATGCCTGTCACCCCCAGCCGCAGCTACTaGTGGATTCGAACATCAGTT +
Preference number: 4 (lower is better)
Translates to: VPQVTIRLLSGAQSMPVTPSRSY*WIRTSV
Trigger: AACTGATGTTCGAATCCAGCAGTAGCTGCGGCTGGG...GGTGACAGGCATCGACTGGGCCCCCGAGAGTAACCGTATTGTGACCTGCGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR CCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTCCCGGCCGCGGACTCTaGGCAGTCGACGCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIPGRGL*AVDAPN
Trigger: GTTCGGCGCGTCGACTGCCCAGAGTCCGCGGCCGGG...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCGGCCGCGGACTCTaGGCAGTCGACGCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDPGRGL*AVDAPN
Trigger: GTTCGGCGCGTCGACTGCCCAGAGTCCGCGGCCGGG...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCACCGGGAAGCAGTCGTaGCCCGCTGCCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLTGKQS*PAATRL
Trigger: CAGCCTGGTGGCAGCGGGCCACGACTGCTTCCCGGT...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp TTCCTCACAGGTCATTTGATCTTGAGGTCCTTCAAGGCTGACTCCAAGCTCTTCGCGCTCACACGCAGGTaGGCGGCTAGCGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FLTGHLILRSFKADSKLFALTRR*AASEPC
Trigger: GCAGGGCTCGCTAGCCGCTCACCTGCGTGTGAGCGC...GAAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGTGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR TCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAATCCAGGCGTGGCAGCTaGTGGGCTCCACCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKSRRGS*WAPPGS
Trigger: GCTTCCTGGTGGAGCCCATCAGCTGCCACGCCTGGA...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GCAGCCCGGTTGATCCGCAGGATGACCAGCGTGGGCTTCCATGTGCGGCCCTTCCTCCTTGATGTAGGCTaGAAAGATCCGACACTTGAA +
Preference number: 4 (lower is better)
Translates to: AARLIRRMTSVGFHVRPFLLDVG*KDPTLE
Trigger: TTCAAGTGTCGGATCTTTTCAGCCTACATCAAGGAG...GAAGGGCCGCACATGGAAGCCCACGCTGGTCATCCTGCGGATCAACCGGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR TCA 90 bp CGCAGGTCACAATACGGTTACTCTCGGGGGCCCAGTCGATGCCTGTCACCTGCCGTTCCTCCACCTCCTTaGTGTAGGCTGAAAAGATCC +
Preference number: 4 (lower is better)
Translates to: RRSQYGYSRGPSRCLSPAVPPPP*CRLKRS
Trigger: GGATCTTTTCAGCCTACATCAAGGAGGTGGAGGAAC...GGCAGGTGACAGGCATCGACTGGGCCCCCGAGAGTAACCGTATTGTGACCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR TCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCCGGCGGCGTCATAGGTaGACAGCACCGGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSRRRHR*TAPGSS
Trigger: ACTGCTTCCCGGTGCTGTTCACCTATGACGCCGCCG...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCCGGGGGCCCAGTCGATaGCTGTCACCTGCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLRGPSR*LSPARC
Trigger: ACAACGGGCAGGTGACAGGCATCGACTGGGCCCCCG...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCGCGTGGGCTTCCATGTaGGGCCCTTCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSAWASM*GPSAST
Trigger: TGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGC...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCCAGCCAGGCAGACGGTaGTGTCGTGGCTTACCCAGG +
Preference number: 4 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSQPGRR*CRGLPR
Trigger: CCTGGGTAAGCCACGACAGCACCGTCTGCCTGGCTG...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCAGCCTGAGCCGCCGCTaGGCTGGACCTCCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASSLSRR*AGPPSL
Trigger: CAGGCTCGGAGGTCCAGCCCAGCGGCGGCTCAGGCT...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR CCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCCGGCCGCGGACTCTaGGCAGTCGACGCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLPGRGL*AVDAPN
Trigger: GTTCGGCGCGTCGACTGCCCAGAGTCCGCGGCCGGG...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp AGCCGCAGCTACTGCTGGATTCGAACATCAGTTCCCCAAAGGGCATCTTGGAGCCAAACTTGTTCTCGTTaGGGGCCCAGCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: SRSYCWIRTSVPQRASWSQTCSR*GPSARS
Trigger: GCTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTG...GCTCCAAGATGCCCTTTGGGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432343.1
ENST00000445924.5
CDS-3UTR CCA 90 bp GTGCCGCAGGTCACAATACGGTTACTCTCGGGGGCCCAGTCGATGCCTGTCACCGCTCGAAATAACAGATaGAGATCACACGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: VPQVTIRLLSGAQSMPVTARNNR*RSHESR
Trigger: GCGGCTCTCGTGTGATCTCCATCTGTTATTTCGAGC...GGTGACAGGCATCGACTGGGCCCCCGAGAGTAACCGTATTGTGACCTGCGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR CCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCCCACGCGGCTCCCGCTaGCTGAGAAACAGACGCCAT +
Preference number: 4 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSPRGSR*LRNRRH
Trigger: ATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGCGTGG...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTACCGGGAAGCAGTCGTaGCCCGCTGCCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPTGKQS*PAATRL
Trigger: CAGCCTGGTGGCAGCGGGCCACGACTGCTTCCCGGT...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAAGCTGTGGTAGGCCATaGCGGCTTGGCTCCCGCGCA +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKSCGRP*RLGSRA
Trigger: TGCGCGGGAGCCAAGCCGCCATGGCCTACCACAGCT...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR CCA 90 bp CGGTCTGTGCCGCAGGTCACAATACGGTTACTCTCGGGGGCCCAGTCGATGCCTGCACCTCATGGTTGTTaGGGCAGATGGCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: RSVPQVTIRLLSGAQSMPAPHGC*GRWQSL
Trigger: AAGAGATTGCCATCTGCCCCAACAACCATGAGGTGC...AGGCATCGACTGGGCCCCCGAGAGTAACCGTATTGTGACCTGCGGCACAGACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR TCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTGAGCTCCCTTCACGCTaGTGCCGGTGGGCGCCAACT +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPELPSR*CRWAPT
Trigger: AGTTGGCGCCCACCGGCATCAGCGTGAAGGGAGCTC...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR TCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCTGGCGGCTTGGCTCCTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLWRLGS*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCTCAGGAGCCAAGCCGCCA...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
CDS-3UTR TCA 90 bp GAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTGAGCCAAGATCGTGCCACCTCCTTGATGTAGGCTaGAAAGATCCGACACTTGAA +
Preference number: 4 (lower is better)
Translates to: ENCSNPAGRGCREPRSCHLLDVG*KDPTLE
Trigger: TTCAAGTGTCGGATCTTTTCAGCCTACATCAAGGAG...GTGGCACGATCTTGGCTCACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR TCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCGCGGCTCCCGCTGGCTaGGAAACAGACGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPAAPAG*ETDAMY
Trigger: GTACATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGC...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCGGCTCCCGCTGGCTaGGAAACAGACGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKAAPAG*ETDAMY
Trigger: GTACATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGC...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCACGGCGGCGTCATAGGTaGACAGCACCGGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKARRRHR*TAPGSS
Trigger: ACTGCTTCCCGGTGCTGTTCACCTATGACGCCGCCG...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCGCGTGGGCTTCCATGTaGGGCCCTTCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLAWASM*GPSAST
Trigger: TGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGC...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCCAGCCAGGCAGACGGTaGTGTCGTGGCTTACCCAGG +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPQPGRR*CRGLPR
Trigger: CCTGGGTAAGCCACGACAGCACCGTCTGCCTGGCTG...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCGCAGTCGTGGCCCGCTaGCACCAGGCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPAVVAR*HQAVVC
Trigger: ACAGACAACAGCCTGGTGGCAGCGGGCCACGACTGC...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCGCAGTCGTGGCCCGCTaGCACCAGGCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLAVVAR*HQAVVC
Trigger: ACAGACAACAGCCTGGTGGCAGCGGGCCACGACTGC...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCACCACGCTGCGAGCTCTaGTTAGGAACGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKAPRCEL*LGTSSR
Trigger: GCGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGG...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCCCACGCTGCGAGCTCTaGTTAGGAACGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPPRCEL*LGTSSR
Trigger: GCGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGG...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCGCCGTCAAGCCACGCTaGGAGCTCTGCTTAGGAACG +
Preference number: 4 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSAVKPR*ELCLGT
Trigger: CGTTCCTAAGCAGAGCTCGCAGCGTGGCTTGACGGC...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCCTGACGCTGTTCTTGTaGAGCGAGTCTAGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSLTLFL*SESRPA
Trigger: CGCGGGCCTAGACTCGCTGCACAAGAACAGCGTCAG...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCTCCTTGTTCCAGGCGTaGCAGCTGATGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSSLFQA*QLMGST
Trigger: GGTGGAGCCCATCAGCTGCCACGCCTGGAACAAGGA...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCCAAACTTGTTCTCGTTaGGGGCCCAGCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSQTCSR*GPSARS
Trigger: GCTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTG...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAACCACGCGGCTCCCGCTaGCTGAGAAACAGACGCCAT +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKPRGSR*LRNRRH
Trigger: ATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGCGTGG...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCCCACGCGGCTCCCGCTaGCTGAGAAACAGACGCCAT +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLPRGSR*LRNRRH
Trigger: ATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGCGTGG...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCACCGGGAAGCAGTCGTaGCCCGCTGCCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASTGKQS*PAATRL
Trigger: CAGCCTGGTGGCAGCGGGCCACGACTGCTTCCCGGT...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTACCGGGAAGCAGTCGTaGCCCGCTGCCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATITGKQS*PAATRL
Trigger: CAGCCTGGTGGCAGCGGGCCACGACTGCTTCCCGGT...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCTTCTTGTCCAGGTTCTaGAAGCGCTCGCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSFLSRF*KRSRAV
Trigger: GACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAA...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CATTTGATCTTGAGGTCCTTCAAGGCTGACTCCAAGCTCTTCACATCCCAGATAGGGAGTCACGTCCTCTaGGCCCGGACGGCGGGTACT +
Preference number: 4 (lower is better)
Translates to: HLILRSFKADSKLFTSQIGSHVL*ARTAGT
Trigger: AGTACCCGCCGTCCGGGCTCAGAGGACGTGACTCCC...TATCTGGGATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR TCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTTGGCGGCTTGGCTCCTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSWRLGS*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCTCAGGAGCCAAGCCGCCA...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
CDS-3UTR TCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTGCGGCTCCCGCTGGCTaGGAAACAGACGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSAAPAG*ETDAMY
Trigger: GTACATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGC...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CCTCTCCCCGCTTCCCCAGCAGCTAGGATGAAGGCAACATATTCCTCACAGGTCGAGGTCCTTCAAGGCTaGCTCCAAGCTCTTCACATC +
Preference number: 4 (lower is better)
Translates to: PLPASPAARMKATYSSQVEVLQG*LQALHI
Trigger: GATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTC...GACCTGTGAGGAATATGTTGCCTTCATCCTAGCTGCTGGGGAAGCGGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR TCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTTGGCCTTGCCGCCGCTaGGCACCGAGATCTGACGCT +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIWPCRR*APRSDA
Trigger: AGCGTCAGATCTCGGTGCTCAGCGGCGGCAAGGCCA...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR GCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCGGGGGCCCAGTCGATaGCTGTCACCTGCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDRGPSR*LSPARC
Trigger: ACAACGGGCAGGTGACAGGCATCGACTGGGCCCCCG...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCTCCACACGTAGGCGTTaGGGTCTGTGCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLSTRRR*GLCRRS
Trigger: TGACCTGCGGCACAGACCGCAACGCCTACGTGTGGA...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCGCGTGGGCTTCCATGTaGGGCCCTTCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTAWASM*GPSAST
Trigger: TGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGC...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GCTCGTGCACCTTGGTCCATTTGGCACCGCTCTTTTCATAGATATGCACCTCATGCGTGGGCTTCCATGTaGGGCCCTTCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: ARAPWSIWHRSFHRYAPHAWASM*GPSAST
Trigger: TGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGC...ATGAGGTGCATATCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGCACGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR GCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCAGCCAGGCAGACGGTaGTGTCGTGGCTTACCCAGG +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTQPGRR*CRGLPR
Trigger: CCTGGGTAAGCCACGACAGCACCGTCTGCCTGGCTG...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCAGCCAGGCAGACGGTaGTGTCGTGGCTTACCCAGG +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPQPGRR*CRGLPR
Trigger: CCTGGGTAAGCCACGACAGCACCGTCTGCCTGGCTG...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTGCAGTCGTGGCCCGCTaGCACCAGGCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSAVVAR*HQAVVC
Trigger: ACAGACAACAGCCTGGTGGCAGCGGGCCACGACTGC...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTGCAGTCGTGGCCCGCTaGCACCAGGCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPAVVAR*HQAVVC
Trigger: ACAGACAACAGCCTGGTGGCAGCGGGCCACGACTGC...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCACGCTGCGAGCTCTaGTTAGGAACGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTPRCEL*LGTSSR
Trigger: GCGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGG...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCCGTCAAGCCACGCTaGGAGCTCTGCTTAGGAACG +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKAVKPR*ELCLGT
Trigger: CGTTCCTAAGCAGAGCTCGCAGCGTGGCTTGACGGC...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAGCCGTCAAGCCACGCTaGGAGCTCTGCTTAGGAACG +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKAAVKPR*ELCLGT
Trigger: CGTTCCTAAGCAGAGCTCGCAGCGTGGCTTGACGGC...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCCTGACGCTGTTCTTGTaGAGCGAGTCTAGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPLTLFL*SESRPA
Trigger: CGCGGGCCTAGACTCGCTGCACAAGAACAGCGTCAG...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCTCATGCCGCCATCCATaGCAGTGGTGCAGAACTGCG +
Preference number: 4 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSSCRHP*QWCRTA
Trigger: CGCAGTTCTGCACCACTGGCATGGATGGCGGCATGA...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCGGGCAGATGGCAATCTaGGTGCGGTCCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSGQMAI*VRSLFQ
Trigger: CTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAACAAACTTGTTCTCGTTaGGGGCCCAGCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKQTCSR*GPSARS
Trigger: GCTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTG...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCACGCGGCTCCCGCTaGCTGAGAAACAGACGCCAT +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTPRGSR*LRNRRH
Trigger: ATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGCGTGG...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCCACGCGGCTCCCGCTaGCTGAGAAACAGACGCCAT +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSPRGSR*LRNRRH
Trigger: ATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGCGTGG...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCACCGGGAAGCAGTCGTaGCCCGCTGCCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLATGKQS*PAATRL
Trigger: CAGCCTGGTGGCAGCGGGCCACGACTGCTTCCCGGT...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAACCGGGAAGCAGTCGTaGCCCGCTGCCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLTGKQS*PAATRL
Trigger: CAGCCTGGTGGCAGCGGGCCACGACTGCTTCCCGGT...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCACCGGGAAGCAGTCGTaGCCCGCTGCCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISTGKQS*PAATRL
Trigger: CAGCCTGGTGGCAGCGGGCCACGACTGCTTCCCGGT...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAATTCTTGTCCAGGTTCTaGAAGCGCTCGCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKFLSRF*KRSRAV
Trigger: GACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAA...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGCGGCTCCCGCTGGCTaGGAAACAGACGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASAAPAG*ETDAMY
Trigger: GTACATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGC...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp TTCCTCACAGGTCATTTGATCTTGAGGTCCTTCAAGGCTGACTCCAAGCTCTTCGCGGCTCCCGCTGGCTaGGAAACAGACGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: FLTGHLILRSFKADSKLFAAPAG*ETDAMY
Trigger: GTACATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGC...GAAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGTGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR TCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTCGGCGGCGTCATAGGTaGACAGCACCGGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIRRRHR*TAPGSS
Trigger: ACTGCTTCCCGGTGCTGTTCACCTATGACGCCGCCG...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp TTCCTCACAGGTCATTTGATCTTGAGGTCCTTCAAGGCTGACTCCAAGCTCTTCCGGCGGCGTCATAGGTaGACAGCACCGGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: FLTGHLILRSFKADSKLFRRRHR*TAPGSS
Trigger: ACTGCTTCCCGGTGCTGTTCACCTATGACGCCGCCG...GAAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGTGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR GCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCAGGCGTTGCGGTCTGTaGCGCAGGTCACAATACGGT +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLRRCGL*RRSQYG
Trigger: ACCGTATTGTGACCTGCGGCACAGACCGCAACGCCT...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCAGGCGTTGCGGTCTGTaGCGCAGGTCACAATACGGT +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPRRCGL*RRSQYG
Trigger: ACCGTATTGTGACCTGCGGCACAGACCGCAACGCCT...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTTCCACACGTAGGCGTTaGGGTCTGTGCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSSTRRR*GLCRRS
Trigger: TGACCTGCGGCACAGACCGCAACGCCTACGTGTGGA...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCTCCACACGTAGGCGTTaGGGTCTGTGCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTSTRRR*GLCRRS
Trigger: TGACCTGCGGCACAGACCGCAACGCCTACGTGTGGA...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTGCGTGGGCTTCCATGTaGGGCCCTTCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIAWASM*GPSAST
Trigger: TGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGC...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp TTCCTCACAGGTCATTTGATCTTGAGGTCCTTCAAGGCTGACTCCAAGCTCTTCCAGCCAGGCAGACGGTaGTGTCGTGGCTTACCCAGG +
Preference number: 4 (lower is better)
Translates to: FLTGHLILRSFKADSKLFQPGRR*CRGLPR
Trigger: CCTGGGTAAGCCACGACAGCACCGTCTGCCTGGCTG...GAAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGTGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR GCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACGCAGTCGTGGCCCGCTaGCACCAGGCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDAVVAR*HQAVVC
Trigger: ACAGACAACAGCCTGGTGGCAGCGGGCCACGACTGC...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCCACGCTGCGAGCTCTaGTTAGGAACGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASPRCEL*LGTSSR
Trigger: GCGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGG...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTCCACGCTGCGAGCTCTaGTTAGGAACGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIPRCEL*LGTSSR
Trigger: GCGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGG...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTGCCGTCAAGCCACGCTaGGAGCTCTGCTTAGGAACG +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSAVKPR*ELCLGT
Trigger: CGTTCCTAAGCAGAGCTCGCAGCGTGGCTTGACGGC...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCGCCGTCAAGCCACGCTaGGAGCTCTGCTTAGGAACG +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTAVKPR*ELCLGT
Trigger: CGTTCCTAAGCAGAGCTCGCAGCGTGGCTTGACGGC...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCTGACGCTGTTCTTGTaGAGCGAGTCTAGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTLTLFL*SESRPA
Trigger: CGCGGGCCTAGACTCGCTGCACAAGAACAGCGTCAG...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCTGACGCTGTTCTTGTaGAGCGAGTCTAGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSLTLFL*SESRPA
Trigger: CGCGGGCCTAGACTCGCTGCACAAGAACAGCGTCAG...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCTCATGCCGCCATCCATaGCAGTGGTGCAGAACTGCG +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLSCRHP*QWCRTA
Trigger: CGCAGTTCTGCACCACTGGCATGGATGGCGGCATGA...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAATCATGCCGCCATCCATaGCAGTGGTGCAGAACTGCG +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKSCRHP*QWCRTA
Trigger: CGCAGTTCTGCACCACTGGCATGGATGGCGGCATGA...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAGGTTGTTGGGGCAGATaGCAATCTGGGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKAGCWGR*QSGCGP
Trigger: AGGACCGCACCCAGATTGCCATCTGCCCCAACAACC...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCGGTTGTTGGGGCAGATaGCAATCTGGGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPGCWGR*QSGCGP
Trigger: AGGACCGCACCCAGATTGCCATCTGCCCCAACAACC...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCAAACTTGTTCTCGTTaGGGGCCCAGCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTQTCSR*GPSARS
Trigger: GCTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTG...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCAAACTTGTTCTCGTTaGGGGCCCAGCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSQTCSR*GPSARS
Trigger: GCTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTG...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCCACGCGGCTCCCGCTaGCTGAGAAACAGACGCCAT +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASPRGSR*LRNRRH
Trigger: ATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGCGTGG...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCTTCTTGTCCAGGTTCTaGAAGCGCTCGCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTFLSRF*KRSRAV
Trigger: GACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAA...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAACGCCATCCATGCCAGTaGTGCAGAACTGCGAGCACT +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKRHPCQ*CRTAST
Trigger: AGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCG...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCCGCCATCCATGCCAGTaGTGCAGAACTGCGAGCACT +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLRHPCQ*CRTAST
Trigger: AGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCG...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCAGCTGTGGTAGGCCATaGCGGCTTGGCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISSCGRP*RLGSSR
Trigger: GCGGGAGGAGCCAAGCCGCCATGGCCTACCACAGCT...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646101.2
CDS-3UTR TCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCTGGCGGCTTGGCTCCTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISWRLGS*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCTCAGGAGCCAAGCCGCCA...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
CDS-3UTR TCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCTGGCGGCTTGGCTCCTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLWRLGS*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCTCAGGAGCCAAGCCGCCA...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
CDS-3UTR TCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCGCGGCTCCCGCTGGCTaGGAAACAGACGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAAAPAG*ETDAMY
Trigger: GTACATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGC...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCGGCTCCCGCTGGCTaGGAAACAGACGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLAAPAG*ETDAMY
Trigger: GTACATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGC...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTACGGCGGCGTCATAGGTaGACAGCACCGGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLRRRHR*TAPGSS
Trigger: ACTGCTTCCCGGTGCTGTTCACCTATGACGCCGCCG...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGGCGGCGTCATAGGTaGACAGCACCGGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLRRRHR*TAPGSS
Trigger: ACTGCTTCCCGGTGCTGTTCACCTATGACGCCGCCG...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTACCAATGGGGAAACTaGGGCTGGGAGCCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAYQWGN*GWEPGA
Trigger: CGCGCCTGGCTCCCAGCCTCAGTTTCCCCATTGGTA...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR GCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTAGGCGTTGCGGTCTGTaGCGCAGGTCACAATACGGT +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPRRCGL*RRSQYG
Trigger: ACCGTATTGTGACCTGCGGCACAGACCGCAACGCCT...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCTCCACACGTAGGCGTTaGGGTCTGTGCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASSTRRR*GLCRRS
Trigger: TGACCTGCGGCACAGACCGCAACGCCTACGTGTGGA...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCGCGTGGGCTTCCATGTaGGGCCCTTCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLAWASM*GPSAST
Trigger: TGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGC...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCGTGGGCTTCCATGTaGGGCCCTTCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLAWASM*GPSAST
Trigger: TGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGC...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCGCGTGGGCTTCCATGTaGGGCCCTTCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAAWASM*GPSAST
Trigger: TGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGC...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTACAGCCAGGCAGACGGTaGTGTCGTGGCTTACCCAGG +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLQPGRR*CRGLPR
Trigger: CCTGGGTAAGCCACGACAGCACCGTCTGCCTGGCTG...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCCAGCCAGGCAGACGGTaGTGTCGTGGCTTACCCAGG +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAQPGRR*CRGLPR
Trigger: CCTGGGTAAGCCACGACAGCACCGTCTGCCTGGCTG...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCAGTCGTGGCCCGCTaGCACCAGGCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLAVVAR*HQAVVC
Trigger: ACAGACAACAGCCTGGTGGCAGCGGGCCACGACTGC...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCGCAGTCGTGGCCCGCTaGCACCAGGCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLAVVAR*HQAVVC
Trigger: ACAGACAACAGCCTGGTGGCAGCGGGCCACGACTGC...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCGCAGTCGTGGCCCGCTaGCACCAGGCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAAVVAR*HQAVVC
Trigger: ACAGACAACAGCCTGGTGGCAGCGGGCCACGACTGC...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCCCACGCTGCGAGCTCTaGTTAGGAACGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAPRCEL*LGTSSR
Trigger: GCGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGG...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACGCCGTCAAGCCACGCTaGGAGCTCTGCTTAGGAACG +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDAVKPR*ELCLGT
Trigger: CGTTCCTAAGCAGAGCTCGCAGCGTGGCTTGACGGC...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTGCCGTCAAGCCACGCTaGGAGCTCTGCTTAGGAACG +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIAVKPR*ELCLGT
Trigger: CGTTCCTAAGCAGAGCTCGCAGCGTGGCTTGACGGC...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACGCTGTTCTTGTaGAGCGAGTCTAGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASLTLFL*SESRPA
Trigger: CGCGGGCCTAGACTCGCTGCACAAGAACAGCGTCAG...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTTCATGCCGCCATCCATaGCAGTGGTGCAGAACTGCG +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPSCRHP*QWCRTA
Trigger: CGCAGTTCTGCACCACTGGCATGGATGGCGGCATGA...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCCATCCCAGATACTCATaGCGCCATCCATGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPHPRYS*RHPCQW
Trigger: CCACTGGCATGGATGGCGGCATGAGTATCTGGGATG...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACTCCTTGTTCCAGGCGTaGCAGCTGATGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDSLFQA*QLMGST
Trigger: GGTGGAGCCCATCAGCTGCCACGCCTGGAACAAGGA...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTGGGCAGATGGCAATCTaGGTGCGGTCCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSGQMAI*VRSLFQ
Trigger: CTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCGGGCAGATGGCAATCTaGGTGCGGTCCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTGQMAI*VRSLFQ
Trigger: CTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTGGTTGTTGGGGCAGATaGCAATCTGGGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPGCWGR*QSGCGP
Trigger: AGGACCGCACCCAGATTGCCATCTGCCCCAACAACC...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTCAAACTTGTTCTCGTTaGGGGCCCAGCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIQTCSR*GPSARS
Trigger: GCTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTG...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTACCACGCGGCTCCCGCTaGCTGAGAAACAGACGCCAT +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLPRGSR*LRNRRH
Trigger: ATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGCGTGG...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCACGCGGCTCCCGCTaGCTGAGAAACAGACGCCAT +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLPRGSR*LRNRRH
Trigger: ATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGCGTGG...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCTTCTTGTCCAGGTTCTaGAAGCGCTCGCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASFLSRF*KRSRAV
Trigger: GACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAA...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTTTCTTGTCCAGGTTCTaGAAGCGCTCGCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIFLSRF*KRSRAV
Trigger: GACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAA...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCGCCATCCATGCCAGTaGTGCAGAACTGCGAGCACT +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTRHPCQ*CRTAST
Trigger: AGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCG...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCGCCATCCATGCCAGTaGTGCAGAACTGCGAGCACT +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSRHPCQ*CRTAST
Trigger: AGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCG...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAAGGCAGATGCTGCAGTaGGTCAAGGTAGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKARQMLQ*VKVVSP
Trigger: TGGTGACACTACCTTGACTCACTGCAGCATCTGCCT...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
CDS-3UTR TCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCAGGCAGATGCTGCAGTaGGTCAAGGTAGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLRQMLQ*VKVVSP
Trigger: TGGTGACACTACCTTGACTCACTGCAGCATCTGCCT...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
CDS-3UTR TCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAAAAAGATCCGACACTTaGAGTCACAGGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKAKRSDT*SHRSRQ
Trigger: CTGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTT...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCAAAAGATCCGACACTTaGAGTCACAGGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLKRSDT*SHRSRQ
Trigger: CTGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTT...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAAAAAGATCCGACACTTaGAGTCACAGGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKKRSDT*SHRSRQ
Trigger: CTGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTT...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCAAAAGATCCGACACTTaGAGTCACAGGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPKRSDT*SHRSRQ
Trigger: CTGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTT...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCGAGGTCCTTCAAGGCTaGCTCCAAGCTCTTCACATC +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLEVLQG*LQALHI
Trigger: GATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTC...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCGAGGTCCTTCAAGGCTaGCTCCAAGCTCTTCACATC +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPEVLQG*LQALHI
Trigger: GATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTC...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAGAGGTCCTTCAAGGCTaGCTCCAAGCTCTTCACATC +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKAEVLQG*LQALHI
Trigger: GATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTC...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAACCCCAGCAGCTAGGATaGAGGCAACATATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKPQQLG*RQHIPH
Trigger: GTGAGGAATATGTTGCCTTCATCCTAGCTGCTGGGG...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCACCCCAGCAGCTAGGATaGAGGCAACATATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKAPQQLG*RQHIPH
Trigger: GTGAGGAATATGTTGCCTTCATCCTAGCTGCTGGGG...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGGCGTTGCGGTCTGTaGCGCAGGTCACAATACGGT +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIRRCGL*RRSQYG
Trigger: ACCGTATTGTGACCTGCGGCACAGACCGCAACGCCT...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCTCCACACGTAGGCGTTaGGGTCTGTGCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLSTRRR*GLCRRS
Trigger: TGACCTGCGGCACAGACCGCAACGCCTACGTGTGGA...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTATCCACACGTAGGCGTTaGGGTCTGTGCCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLSTRRR*GLCRRS
Trigger: TGACCTGCGGCACAGACCGCAACGCCTACGTGTGGA...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCACACGAGAGCCGCTaGCCACAGCAAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPSHESR*PQQTCS
Trigger: AGAACAAGTTTGCTGTGGGCAGCGGCTCTCGTGTGA...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAATCACACGAGAGCCGCTaGCCACAGCAAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKSHESR*PQQTCS
Trigger: AGAACAAGTTTGCTGTGGGCAGCGGCTCTCGTGTGA...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCCCCAGCCGCAGCTACTaGTGGATTCGAACATCAGTT +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPPSRSY*WIRTSV
Trigger: AACTGATGTTCGAATCCAGCAGTAGCTGCGGCTGGG...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAACCCAGCCGCAGCTACTaGTGGATTCGAACATCAGTT +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKPSRSY*WIRTSV
Trigger: AACTGATGTTCGAATCCAGCAGTAGCTGCGGCTGGG...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCGTCAAGCCACGCTaGGAGCTCTGCTTAGGAACG +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLAVKPR*ELCLGT
Trigger: CGTTCCTAAGCAGAGCTCGCAGCGTGGCTTGACGGC...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCTGACGCTGTTCTTGTaGAGCGAGTCTAGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLLTLFL*SESRPA
Trigger: CGCGGGCCTAGACTCGCTGCACAAGAACAGCGTCAG...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTTCATGCCGCCATCCATaGCAGTGGTGCAGAACTGCG +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATISCRHP*QWCRTA
Trigger: CGCAGTTCTGCACCACTGGCATGGATGGCGGCATGA...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACTCATGCCGCCATCCATaGCAGTGGTGCAGAACTGCG +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDSCRHP*QWCRTA
Trigger: CGCAGTTCTGCACCACTGGCATGGATGGCGGCATGA...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCATCCCAGATACTCATaGCGCCATCCATGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSHPRYS*RHPCQW
Trigger: CCACTGGCATGGATGGCGGCATGAGTATCTGGGATG...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCATCCCAGATACTCATaGCGCCATCCATGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPHPRYS*RHPCQW
Trigger: CCACTGGCATGGATGGCGGCATGAGTATCTGGGATG...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCTTGTTCCAGGCGTaGCAGCTGATGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLASLFQA*QLMGST
Trigger: GGTGGAGCCCATCAGCTGCCACGCCTGGAACAAGGA...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGGGCAGATGGCAATCTaGGTGCGGTCCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASGQMAI*VRSLFQ
Trigger: CTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACGGTTGTTGGGGCAGATaGCAATCTGGGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDGCWGR*QSGCGP
Trigger: AGGACCGCACCCAGATTGCCATCTGCCCCAACAACC...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGGTTGTTGGGGCAGATaGCAATCTGGGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASGCWGR*QSGCGP
Trigger: AGGACCGCACCCAGATTGCCATCTGCCCCAACAACC...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTGCACCTCATGGTTGTTaGGGCAGATGGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPAPHGC*GRWQSG
Trigger: CCCAGATTGCCATCTGCCCCAACAACCATGAGGTGC...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCGCACCTCATGGTTGTTaGGGCAGATGGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTAPHGC*GRWQSG
Trigger: CCCAGATTGCCATCTGCCCCAACAACCATGAGGTGC...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCCAAACTTGTTCTCGTTaGGGGCCCAGCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAQTCSR*GPSARS
Trigger: GCTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTG...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCAGCCGCAGCTACTGCTaGATTCGAACATCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLSRSYC*IRTSVP
Trigger: GGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAAGCCGCAGCTACTGCTaGATTCGAACATCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKASRSYC*IRTSVP
Trigger: GGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAAGCCGCAGCTACTGCTaGATTCGAACATCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKSRSYC*IRTSVP
Trigger: GGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTTCTTGTCCAGGTTCTaGAAGCGCTCGCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAFLSRF*KRSRAV
Trigger: GACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAA...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCGCCATCCATGCCAGTaGTGCAGAACTGCGAGCACT +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDRHPCQ*CRTAST
Trigger: AGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCG...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTAGGGAGCAGCCCCTATaGGAACTCGTATTGGTACCC +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSREQPL*ELVLVP
Trigger: GGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCT...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCGAAGTTAGGTTCACCTaGGGGAACACTCCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAEVRFT*GNTPAP
Trigger: GGGCGCGGGAGTGTTCCCCCAGGTGAACCTAACTTC...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451682.5
CDS-3UTR TCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTAGGCAGATGCTGCAGTaGGTCAAGGTAGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSRQMLQ*VKVVSP
Trigger: TGGTGACACTACCTTGACTCACTGCAGCATCTGCCT...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
CDS-3UTR TCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAGTTCCTCCACCTCCTTaGTGTAGGCTGAAAAGATCC +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKAVPPPP*CRLKRS
Trigger: GGATCTTTTCAGCCTACATCAAGGAGGTGGAGGAAC...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCCCCAGCAGCTAGGATaGAGGCAACATATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSPQQLG*RQHIPH
Trigger: GTGAGGAATATGTTGCCTTCATCCTAGCTGCTGGGG...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCCCCAGCAGCTAGGATaGAGGCAACATATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPPQQLG*RQHIPH
Trigger: GTGAGGAATATGTTGCCTTCATCCTAGCTGCTGGGG...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAAGGCGTTGCGGTCTGTaGCGCAGGTCACAATACGGT +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLRRCGL*RRSQYG
Trigger: ACCGTATTGTGACCTGCGGCACAGACCGCAACGCCT...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCAGGCGTTGCGGTCTGTaGCGCAGGTCACAATACGGT +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLRRCGL*RRSQYG
Trigger: ACCGTATTGTGACCTGCGGCACAGACCGCAACGCCT...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCTCACACGAGAGCCGCTaGCCACAGCAAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTSHESR*PQQTCS
Trigger: AGAACAAGTTTGCTGTGGGCAGCGGCTCTCGTGTGA...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTTCACACGAGAGCCGCTaGCCACAGCAAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSSHESR*PQQTCS
Trigger: AGAACAAGTTTGCTGTGGGCAGCGGCTCTCGTGTGA...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCCCAGCCGCAGCTACTaGTGGATTCGAACATCAGTT +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPPSRSY*WIRTSV
Trigger: AACTGATGTTCGAATCCAGCAGTAGCTGCGGCTGGG...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCATGCCGCCATCCATaGCAGTGGTGCAGAACTGCG +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLASCRHP*QWCRTA
Trigger: CGCAGTTCTGCACCACTGGCATGGATGGCGGCATGA...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTCATCCCAGATACTCATaGCGCCATCCATGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIHPRYS*RHPCQW
Trigger: CCACTGGCATGGATGGCGGCATGAGTATCTGGGATG...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCGGGCAGATGGCAATCTaGGTGCGGTCCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAGQMAI*VRSLFQ
Trigger: CTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CATTTGATCTTGAGGTCCTTCAAGGCTGACTCCAAGCTCTTCACATCCCAGATAGGGCAGATGGCAATCTaGGTGCGGTCCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: HLILRSFKADSKLFTSQIGQMAI*VRSLFQ
Trigger: CTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC...TATCTGGGATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR CCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGGGCAGATGGCAATCTaGGTGCGGTCCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLGQMAI*VRSLFQ
Trigger: CTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGCACCTCATGGTTGTTaGGGCAGATGGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASAPHGC*GRWQSG
Trigger: CCCAGATTGCCATCTGCCCCAACAACCATGAGGTGC...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACAGCTGTGGTAGGCCATaGCGGCTTGGCTCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDSCGRP*RLGSCN
Trigger: ATTACAGGAGCCAAGCCGCCATGGCCTACCACAGCT...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458033.6
ENST00000645391.1
CDS-3UTR CCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAGCTCGAAATAACAGATaGAGATCACACGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKAARNNR*RSHESR
Trigger: GCGGCTCTCGTGTGATCTCCATCTGTTATTTCGAGC...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCGCTCGAAATAACAGATaGAGATCACACGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLARNNR*RSHESR
Trigger: GCGGCTCTCGTGTGATCTCCATCTGTTATTTCGAGC...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTAGCCGCAGCTACTGCTaGATTCGAACATCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSSRSYC*IRTSVP
Trigger: GGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCGCCATCCATGCCAGTaGTGCAGAACTGCGAGCACT +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISRHPCQ*CRTAST
Trigger: AGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCG...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGCCATCCATGCCAGTaGTGCAGAACTGCGAGCACT +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLRHPCQ*CRTAST
Trigger: AGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCG...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACAGGGAGCAGCCCCTATaGGAACTCGTATTGGTACCC +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDREQPL*ELVLVP
Trigger: GGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCT...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGGGAGCAGCCCCTATaGGAACTCGTATTGGTACCC +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIREQPL*ELVLVP
Trigger: GGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCT...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCAGGCAGATGCTGCAGTaGGTCAAGGTAGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASRQMLQ*VKVVSP
Trigger: TGGTGACACTACCTTGACTCACTGCAGCATCTGCCT...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
CDS-3UTR TCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCAAAAGATCCGACACTTaGAGTCACAGGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASKRSDT*SHRSRQ
Trigger: CTGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTT...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACAAAAGATCCGACACTTaGAGTCACAGGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDKRSDT*SHRSRQ
Trigger: CTGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTT...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTGTTCCTCCACCTCCTTaGTGTAGGCTGAAAAGATCC +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPVPPPP*CRLKRS
Trigger: GGATCTTTTCAGCCTACATCAAGGAGGTGGAGGAAC...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCGTTCCTCCACCTCCTTaGTGTAGGCTGAAAAGATCC +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTVPPPP*CRLKRS
Trigger: GGATCTTTTCAGCCTACATCAAGGAGGTGGAGGAAC...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTGAGGTCCTTCAAGGCTaGCTCCAAGCTCTTCACATC +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIEVLQG*LQALHI
Trigger: GATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTC...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTTCACACGAGAGCCGCTaGCCACAGCAAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATISHESR*PQQTCS
Trigger: AGAACAAGTTTGCTGTGGGCAGCGGCTCTCGTGTGA...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTCCCAGCCGCAGCTACTaGTGGATTCGAACATCAGTT +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIPSRSY*WIRTSV
Trigger: AACTGATGTTCGAATCCAGCAGTAGCTGCGGCTGGG...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCATCCCAGATACTCATaGCGCCATCCATGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLHPRYS*RHPCQW
Trigger: CCACTGGCATGGATGGCGGCATGAGTATCTGGGATG...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCCGCAACCACCGTCAATaGTTTACCAATGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: RIGTPETFSKATISLPDPRNHRQ*FTNGET
Trigger: AGTTTCCCCATTGGTAAAGCATTGACGGTGGTTGCG...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR CCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCGCACCTCATGGTTGTTaGGGCAGATGGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAAPHGC*GRWQSG
Trigger: CCCAGATTGCCATCTGCCCCAACAACCATGAGGTGC...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCGCACCTCATGGTTGTTaGGGCAGATGGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISAPHGC*GRWQSG
Trigger: CCCAGATTGCCATCTGCCCCAACAACCATGAGGTGC...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCACCTCATGGTTGTTaGGGCAGATGGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLAPHGC*GRWQSG
Trigger: CCCAGATTGCCATCTGCCCCAACAACCATGAGGTGC...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCGCACCTTGGTCCATTTaGCACCGCTCTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLAPWSI*HRSFHR
Trigger: TCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGC...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAGCACCTTGGTCCATTTaGCACCGCTCTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKAAPWSI*HRSFHR
Trigger: TCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGC...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCAGCTGTGGTAGGCCATaGCGGCTTGGCTCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLASCGRP*RLGSCN
Trigger: ATTACAGGAGCCAAGCCGCCATGGCCTACCACAGCT...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458033.6
ENST00000645391.1
CDS-3UTR CCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCGCTCGAAATAACAGATaGAGATCACACGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTARNNR*RSHESR
Trigger: GCGGCTCTCGTGTGATCTCCATCTGTTATTTCGAGC...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCAGCCGCAGCTACTGCTaGATTCGAACATCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASSRSYC*IRTSVP
Trigger: GGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCAGGGAGCAGCCCCTATaGGAACTCGTATTGGTACCC +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLREQPL*ELVLVP
Trigger: GGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCT...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCAGGGAGCAGCCCCTATaGGAACTCGTATTGGTACCC +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISREQPL*ELVLVP
Trigger: GGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCT...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAAGGGAGCAGCCCCTATaGGAACTCGTATTGGTACCC +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLREQPL*ELVLVP
Trigger: GGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCT...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCAGGCAGATGCTGCAGTaGGTCAAGGTAGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISRQMLQ*VKVVSP
Trigger: TGGTGACACTACCTTGACTCACTGCAGCATCTGCCT...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
CDS-3UTR TCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCAGGCAGATGCTGCAGTaGGTCAAGGTAGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLRQMLQ*VKVVSP
Trigger: TGGTGACACTACCTTGACTCACTGCAGCATCTGCCT...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
CDS-3UTR TCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCAAAAGATCCGACACTTaGAGTCACAGGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAKRSDT*SHRSRQ
Trigger: CTGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTT...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCACTCCTTGATGTAGGCTaGAAAGATCCGACACTTGAA +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKALLDVG*KDPTLE
Trigger: TTCAAGTGTCGGATCTTTTCAGCCTACATCAAGGAG...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAACTCCTTGATGTAGGCTaGAAAGATCCGACACTTGAA +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKLLDVG*KDPTLE
Trigger: TTCAAGTGTCGGATCTTTTCAGCCTACATCAAGGAG...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGTTCCTCCACCTCCTTaGTGTAGGCTGAAAAGATCC +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASVPPPP*CRLKRS
Trigger: GGATCTTTTCAGCCTACATCAAGGAGGTGGAGGAAC...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCGAGGTCCTTCAAGGCTaGCTCCAAGCTCTTCACATC +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAEVLQG*LQALHI
Trigger: GATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTC...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCCCCCAGCAGCTAGGATaGAGGCAACATATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAPQQLG*RQHIPH
Trigger: GTGAGGAATATGTTGCCTTCATCCTAGCTGCTGGGG...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCTCACACGAGAGCCGCTaGCCACAGCAAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISSHESR*PQQTCS
Trigger: AGAACAAGTTTGCTGTGGGCAGCGGCTCTCGTGTGA...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCTCACACGAGAGCCGCTaGCCACAGCAAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLSHESR*PQQTCS
Trigger: AGAACAAGTTTGCTGTGGGCAGCGGCTCTCGTGTGA...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTACCCAGCCGCAGCTACTaGTGGATTCGAACATCAGTT +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLPSRSY*WIRTSV
Trigger: AACTGATGTTCGAATCCAGCAGTAGCTGCGGCTGGG...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCCCCAGCCGCAGCTACTaGTGGATTCGAACATCAGTT +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAPSRSY*WIRTSV
Trigger: AACTGATGTTCGAATCCAGCAGTAGCTGCGGCTGGG...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR GCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCCCAGCCGCAGCTACTaGTGGATTCGAACATCAGTT +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISPSRSY*WIRTSV
Trigger: AACTGATGTTCGAATCCAGCAGTAGCTGCGGCTGGG...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTGCACCTTGGTCCATTTaGCACCGCTCTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSAPWSI*HRSFHR
Trigger: TCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGC...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACGCTCGAAATAACAGATaGAGATCACACGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDARNNR*RSHESR
Trigger: GCGGCTCTCGTGTGATCTCCATCTGTTATTTCGAGC...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TTCCTCACAGGTCATTTGATCTTGAGGTCCTTCAAGGCTGACTCCAAGCTCTTCGCTCGAAATAACAGATaGAGATCACACGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: FLTGHLILRSFKADSKLFARNNR*RSHESR
Trigger: GCGGCTCTCGTGTGATCTCCATCTGTTATTTCGAGC...GAAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR CCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTGCTCGAAATAACAGATaGAGATCACACGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIARNNR*RSHESR
Trigger: GCGGCTCTCGTGTGATCTCCATCTGTTATTTCGAGC...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGCTCGAAATAACAGATaGAGATCACACGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASARNNR*RSHESR
Trigger: GCGGCTCTCGTGTGATCTCCATCTGTTATTTCGAGC...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCAGCCGCAGCTACTGCTaGATTCGAACATCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLSRSYC*IRTSVP
Trigger: GGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCTCCTTGATGTAGGCTaGAAAGATCCGACACTTGAA +
Preference number: 4 (lower is better)
Translates to: IGTPETFSKATISLPDPSLLDVG*KDPTLE
Trigger: TTCAAGTGTCGGATCTTTTCAGCCTACATCAAGGAG...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCGTTCCTCCACCTCCTTaGTGTAGGCTGAAAAGATCC +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLVPPPP*CRLKRS
Trigger: GGATCTTTTCAGCCTACATCAAGGAGGTGGAGGAAC...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCGTTCCTCCACCTCCTTaGTGTAGGCTGAAAAGATCC +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISVPPPP*CRLKRS
Trigger: GGATCTTTTCAGCCTACATCAAGGAGGTGGAGGAAC...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCAAGGCACGTATTCCTTaGATAGGTAAGAAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLKARIP*IGKKSS
Trigger: GGAGCTTTTCTTACCTATTCAAGGAATACGTGCCTT...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAAAGGCACGTATTCCTTaGATAGGTAAGAAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GAAPMGTRIGTPETFSKAKARIP*IGKKSS
Trigger: GGAGCTTTTCTTACCTATTCAAGGAATACGTGCCTT...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAAAGGCACGTATTCCTTaGATAGGTAAGAAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKKARIP*IGKKSS
Trigger: GGAGCTTTTCTTACCTATTCAAGGAATACGTGCCTT...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTGCACCTTGGTCCATTTaGCACCGCTCTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATIAPWSI*HRSFHR
Trigger: TCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGC...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGCACCTTGGTCCATTTaGCACCGCTCTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASAPWSI*HRSFHR
Trigger: TCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGC...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACGCACCTTGGTCCATTTaGCACCGCTCTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDAPWSI*HRSFHR
Trigger: TCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGC...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCGCTCGAAATAACAGATaGAGATCACACGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISARNNR*RSHESR
Trigger: GCGGCTCTCGTGTGATCTCCATCTGTTATTTCGAGC...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTCTCCTTGATGTAGGCTaGAAAGATCCGACACTTGAA +
Preference number: 4 (lower is better)
Translates to: APMGTRIGTPETFSKATILLDVG*KDPTLE
Trigger: TTCAAGTGTCGGATCTTTTCAGCCTACATCAAGGAG...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCGCACCTTGGTCCATTTaGCACCGCTCTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLAPWSI*HRSFHR
Trigger: TCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGC...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCGCACCTTGGTCCATTTaGCACCGCTCTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISAPWSI*HRSFHR
Trigger: TCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGC...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTTATGGGAACTCGTATTaGTACCCCAGAAACATTCAG +
Preference number: 4 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPYGNSY*YPRNIQ
Trigger: CTGAATGTTTCTGGGGTACCAATACGAGTTCCCATA...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCTATGGGAACTCGTATTaGTACCCCAGAAACATTCAG +
Preference number: 4 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTYGNSY*YPRNIQ
Trigger: CTGAATGTTTCTGGGGTACCAATACGAGTTCCCATA...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCCTCCTTGATGTAGGCTaGAAAGATCCGACACTTGAA +
Preference number: 4 (lower is better)
Translates to: LWELVLVPQKHSAKQPLALLDVG*KDPTLE
Trigger: TTCAAGTGTCGGATCTTTTCAGCCTACATCAAGGAG...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCTCCTTGATGTAGGCTaGAAAGATCCGACACTTGAA +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLLLDVG*KDPTLE
Trigger: TTCAAGTGTCGGATCTTTTCAGCCTACATCAAGGAG...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp TTCCTCACAGGTCATTTGATCTTGAGGTCCTTCAAGGCTGACTCCAAGCTCTTCAAGGCACGTATTCCTTaGATAGGTAAGAAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLTGHLILRSFKADSKLFKARIP*IGKKSS
Trigger: GGAGCTTTTCTTACCTATTCAAGGAATACGTGCCTT...GAAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGTGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR TCA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACAAGGCACGTATTCCTTaGATAGGTAAGAAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: TRIGTPETFSKATISLPDKARIP*IGKKSS
Trigger: GGAGCTTTTCTTACCTATTCAAGGAATACGTGCCTT...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCAAGGCACGTATTCCTTaGATAGGTAAGAAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASKARIP*IGKKSS
Trigger: GGAGCTTTTCTTACCTATTCAAGGAATACGTGCCTT...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCTATGGGAACTCGTATTaGTACCCCAGAAACATTCAG +
Preference number: 4 (lower is better)
Translates to: WELVLVPQKHSAKQPLASYGNSY*YPRNIQ
Trigger: CTGAATGTTTCTGGGGTACCAATACGAGTTCCCATA...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR TCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAAAGGCACGTATTCCTTaGATAGGTAAGAAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLKARIP*IGKKSS
Trigger: GGAGCTTTTCTTACCTATTCAAGGAATACGTGCCTT...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTATATGGGAACTCGTATTaGTACCCCAGAAACATTCAG +
Preference number: 4 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLYGNSY*YPRNIQ
Trigger: CTGAATGTTTCTGGGGTACCAATACGAGTTCCCATA...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCTATGGGAACTCGTATTaGTACCCCAGAAACATTCAG +
Preference number: 4 (lower is better)
Translates to: PMGTRIGTPETFSKATISYGNSY*YPRNIQ
Trigger: CTGAATGTTTCTGGGGTACCAATACGAGTTCCCATA...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CCA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCTATGGGAACTCGTATTaGTACCCCAGAAACATTCAG +
Preference number: 4 (lower is better)
Translates to: MGTRIGTPETFSKATISLYGNSY*YPRNIQ
Trigger: CTGAATGTTTCTGGGGTACCAATACGAGTTCCCATA...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS GCA 90 bp AGGTTCTGGAAGCGCTCGCGGGCCGTCAAGCCACGCTGCGAGCTCTaGTTAGGAACGTCCAGCCGCCCGCCGAAGCTCAGCATCCCCGCG +
Preference number: 5 (lower is better)
Translates to: RFWKRSRAVKPRCEL*LGTSSRPPKLSIPA
Trigger: CGCGGGGATGCTGAGCTTCGGCGGGCGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGGCTTGACGGCCCGCGAGCGCTTCCAGAACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000417330.6
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CTCGTTGGGGGCCCAGCGCACGCAGCGGGCAGCCCGGTTGATCCGCAGGATGACGCAAACTTGTTCTCGTaGGGGGCCCAGCGCACGCAG +
Preference number: 5 (lower is better)
Translates to: LVGGPAHAAGSPVDPQDDANLFS*GAQRTQ
Trigger: CTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTGC...GTCATCCTGCGGATCAACCGGGCTGCCCGCTGCGTGCGCTGGGCCCCCAACGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS CCA 90 bp CCCGCAGCCGTGCCACCCTCGGAGCTCGCCTTCTTGTCCAGGTTCTaGAAGCGCTCGCGGGCCGTCAAGCCACGCTGCGAGCTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: PAAVPPSELAFLSRF*KRSRAVKPRCELCL
Trigger: TAAGCAGAGCTCGCAGCGTGGCTTGACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCCGAGGGTGGCACGGCTGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000417330.6
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTGAGCAGCGGGCAGCCCGGTaGATCCGCAGGATGACCAGC +
Preference number: 5 (lower is better)
Translates to: WEAEAENCSNPAGRGCREQRAAR*IRRMTS
Trigger: GCTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTG...CTCACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR CAA 90 bp CCAGCGTGGGCTTCCATGTGCGGCCCTTCAGCGTCCACACGTAGGCGTTGCGGTCAGCGGGCAGCCCGGTaGATCCGCAGGATGACCAGC +
Preference number: 5 (lower is better)
Translates to: PAWASMCGPSASTRRRCGQRAAR*IRRMTS
Trigger: GCTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTG...ACCGCAACGCCTACGTGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS TCA 90 bp CTGGAACTGGCTGTCGGGTGCGGTCCTTGTTCCAGGCGTGGCAGCTaGTGGGCTCCACCAGGAAGCTGTGGTAGGCCATGGCGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: LELAVGCGPCSRRGS*WAPPGSCGRPWRLG
Trigger: GCCAAGCCGCCATGGCCTACCACAGCTTCCTGGTGGAGCCCATCAGCTGCCACGCCTGGAACAAGGACCGCACCCGACAGCCAGTTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS GCA 90 bp TTCTTGTCCAGGTTCTGGAAGCGCTCGCGGGCCGTCAAGCCACGCTaGGAGCTCTGCTTAGGAACGTCCAGCCGCCCGCCGAAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: FLSRFWKRSRAVKPR*ELCLGTSSRPPKLS
Trigger: GCTGAGCTTCGGCGGGCGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGGCTTGACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000417330.6
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS CCA 90 bp AGAGAGGCGACTGGGCATTGCCAGCCCACAAGGCCGTCAGGGCCCTaGGGCGGCAGGGATGTGCTGTGTCGCTTCTGGAGTGGGAACTCT +
Preference number: 5 (lower is better)
Translates to: REATGHCQPTRPSGP*GGRDVLCRFWSGNS
Trigger: AGAGTTCCCACTCCAGAAGCGACACAGCACATCCCTGCCGCCCCAGGGCCCTGACGGCCTTGTGGGCTGGCAATGCCCAGTCGCCTCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468337.1
CDS GCA 90 bp AGCTCTGCAGGGAGGCAGAACGGACAGGCTGGTTCTCAGCTGTCCTaGAGGCACCCCACTCCCAGGGACCTGATCACCCATCTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SSAGRQNGQAGSQLS*RHPTPRDLITHLSP
Trigger: GGGGCTGAGATGGGTGATCAGGTCCCTGGGAGTGGGGTGCCTGCAGGACAGCTGAGAACCAGCCTGTCCGTTCTGCCTCCCTGCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463078.1
ENST00000491294.1
CDS GCA 90 bp TTTGGAGTCTGTCAGCTGGGTTGGAATCCCGGCCCTGAAGACGGGTaGCCCAGTGAGCACCAAGGCCCAGATGTCAAGGGGCCGCCCCCA +
Preference number: 5 (lower is better)
Translates to: FGVCQLGWNPGPEDG*PSEHQGPDVKGPPP
Trigger: TGGGGGCGGCCCCTTGACATCTGGGCCTTGGTGCTCACTGGGGCACCCGTCTTCAGGGCCGGGATTCCAACCCAGCTGACAGACTCCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491294.1
CDS-3UTR CAA 90 bp GAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTGAGCCAAGATCGTGCCACGCAAACTTGTTCTCGTaGGGGGCCCAGCGCACGCAG +
Preference number: 5 (lower is better)
Translates to: ENCSNPAGRGCREPRSCHANLFS*GAQRTQ
Trigger: CTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTGC...GTGGCACGATCTTGGCTCACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR CAA 90 bp CGCAGGTCACAATACGGTTACTCTCGGGGGCCCAGTCGATGCCTGTCACCTGCCTGTCGGGTGCGGTCCTaGTTCCAGGCGTGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RRSQYGYSRGPSRCLSPACRVRS*FQAWQL
Trigger: CAGCTGCCACGCCTGGAACAAGGACCGCACCCGACA...GGCAGGTGACAGGCATCGACTGGGCCCCCGAGAGTAACCGTATTGTGACCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR CAA 90 bp GCAGCCCGGTTGATCCGCAGGATGACCAGCGTGGGCTTCCATGTGCGGCCCTTCTTGAGCTCGTGCACCTaGGTCCATTTGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: AARLIRRMTSVGFHVRPFLSSCT*VHLAPL
Trigger: GAGCGGTGCCAAATGGACCAAGGTGCACGAGCTCAA...GAAGGGCCGCACATGGAAGCCCACGCTGGTCATCCTGCGGATCAACCGGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR CAA 90 bp CCAGCTACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCCTGCCCACAGCAAACTaGTTCTCGTTGGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PATWEAEAENCSNPAGRGLPTAN*FSLGAQ
Trigger: CTGGGCCCCCAACGAGAACAAGTTTGCTGTGGGCAG...GCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGTAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS GCA 90 bp ATTGCCAGCCCACAAGGCCGTCAGGGCCCTGGGGCGGCAGGGATGTaGTGTGTCGCTTCTGGAGTGGGAACTCTGTGCCCTCTATCCTTT +
Preference number: 5 (lower is better)
Translates to: IASPQGRQGPGAAGM*CVASGVGTLCPLSF
Trigger: AAAGGATAGAGGGCACAGAGTTCCCACTCCAGAAGCGACACAGCACATCCCTGCCGCCCCAGGGCCCTGACGGCCTTGTGGGCTGGCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468337.1
CDS-3UTR CAA 90 bp CCAGCGTGGGCTTCCATGTGCGGCCCTTCAGCGTCCACACGTAGGCGTTGCGGTGAGCGGATGGGCTTCTaGATGTGCTTGCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: PAWASMCGPSASTRRRCGERMGF*MCLQTH
Trigger: GTGGGTTTGCAAGCACATCAAGAAGCCCATCCGCTC...ACCGCAACGCCTACGTGTGGACGCTGAAGGGCCGCACATGGAAGCCCACGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR CAA 90 bp TGTGCCGCAGGTCACAATACGGTTACTCTCGGGGGCCCAGTCGATGCCTGTCACCTCTCCTCTTCTGCCTaGCAGGGGCCCCCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: CAAGHNTVTLGGPVDACHLSSSA*QGPPEV
Trigger: GACTTCAGGGGGCCCCTGCAAGGCAGAAGAGGAGAG...GTGACAGGCATCGACTGGGCCCCCGAGAGTAACCGTATTGTGACCTGCGGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS GCA 90 bp ACATCCCAGATACTCATGCCGCCATCCATGCCAGTGGTGCAGAACTaGGAGCACTTGGCCTTGCCGCCGCTGAGCACCGAGATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TSQILMPPSMPVVQN*EHLALPPLSTEIWL
Trigger: CAGCCAGATCTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCGGCATGAGTATCTGGGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS GCA 90 bp GGGGCGGCAGGGATGTGCTGTGTCGCTTCTGGAGTGGGAACTCTGTaGCCTCTATCCTTTAGGCCACACAGTCACCCTCAGAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: GAAGMCCVASGVGTL*PLSFRPHSHPQSRL
Trigger: GAGCCTGCTCTGAGGGTGACTGTGTGGCCTAAAGGATAGAGGGCACAGAGTTCCCACTCCAGAAGCGACACAGCACATCCCTGCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468337.1
CDS CCA 90 bp AGCAGAGGGCAGAGAACCTGCAGTTTTGGAGTCTGTCAGCTGGGTTaGAATCCCGGCCCTGAAGACGGGTGCCCCAGTGAGCACCAAGGC +
Preference number: 5 (lower is better)
Translates to: SRGQRTCSFGVCQLG*NPGPEDGCPSEHQG
Trigger: GCCTTGGTGCTCACTGGGGCACCCGTCTTCAGGGCCGGGATTCCAACCCAGCTGACAGACTCCAAAACTGCAGGTTCTCTGCCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491294.1
CDS CCA 90 bp AGCACAGCAGAGGGCAGAGAACCTGCAGTTTTGGAGTCTGTCAGCTaGGTTGGAATCCCGGCCCTGAAGACGGGTGCCCCAGTGAGCACC +
Preference number: 5 (lower is better)
Translates to: STAEGREPAVLESVS*VGIPALKTGAPVST
Trigger: GGTGCTCACTGGGGCACCCGTCTTCAGGGCCGGGATTCCAACCCAGCTGACAGACTCCAAAACTGCAGGTTCTCTGCCCTCTGCTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491294.1
CDS-3UTR CAA 90 bp CCAGCTACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCACCTCATGGTTGTaGGGGCAGATGGCAATCTGG +
Preference number: 5 (lower is better)
Translates to: PATWEAEAENCSNPAGRGCTSWL*GQMAIW
Trigger: CCAGATTGCCATCTGCCCCAACAACCATGAGGTGCA...GCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGTAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR CAA 90 bp GGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTGAGCATATGCACCTCATGGTaGTTGGGGCAGATGGCAATC +
Preference number: 5 (lower is better)
Translates to: GRLRQRTARTRQAEAAVSICTSW*LGQMAI
Trigger: GATTGCCATCTGCCCCAACAACCATGAGGTGCATAT...GCTCACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR CAA 90 bp CTACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGAGCGGATGGGCTTCTaGATGTGCTTGCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: LLGRLRQRTARTRQAEAAERMGF*MCLQTH
Trigger: GTGGGTTTGCAAGCACATCAAGAAGCCCATCCGCTC...GGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR CAA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTGTAGGCCATGGCGGCTaGGCTCCTCCCGCGCCCCGG +
Preference number: 5 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPVGHGG*APPAPR
Trigger: CCGGGGCGCGGGAGGAGCCAAGCCGCCATGGCCTAC...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646101.2
CDS GCA 90 bp GGAAGCCAGGAGGGGCAAGCCTCACCTTCACATCCCAGATACTCATaGCGCCATCCATGCCAGTGGTGCAGAACTGCGAGCACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: GSQEGQASPSHPRYS*RHPCQWCRTASTWP
Trigger: AGGCCAAGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCGGCATGAGTATCTGGGATGTGAAGGTGAGGCTTGCCCCTCCTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491294.1
CDS-3UTR CAA 90 bp ACTTGGGAGGCTGAGGCAGAGAACTGCTCGAACCCGGCAGGCAGAGGCTGCCGTGAAAAGATCCGACACTaGAAGTCACAGGAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: TWEAEAENCSNPAGRGCREKIRH*KSQEPA
Trigger: TGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTTC...ACGGCAGCCTCTGCCTGCCGGGTTCGAGCAGTTCTCTGCCTCAGCCTCCCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432343.1
CDS-3UTR CAA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCTGCGAGCACTTGGCCTaGCCGCCGCTGAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSCEHLA*PPLSTE
Trigger: CTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCA...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS TCA 90 bp CCACCCTGTCTTCTCCTGGAACTGGCTGTCCTTTACTCGCAGCAATaGACCCTGGGACCTCTCCCCACCCTATTGCTCTGGCCAACCAGG +
Preference number: 5 (lower is better)
Translates to: PPCLLLELAVLYSQQ*TLGPLPTLLLWPTR
Trigger: CCTGGTTGGCCAGAGCAATAGGGTGGGGAGAGGTCCCAGGGTTCATTGCTGCGAGTAAAGGACAGCCAGTTCCAGGAGAAGACAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493403.1
CDS GCA 90 bp CCCAGCACAGCAGAGGGCAGAGAACCTTCACATCCCAGATACTCATaGCGCCATCCATGCCAGTGGTGCAGAACTGCGAGCACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: PSTAEGREPSHPRYS*RHPCQWCRTASTWP
Trigger: AGGCCAAGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCGGCATGAGTATCTGGGATGTGAAGGTTCTCTGCCCTCTGCTGTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463078.1
CDS CCA 90 bp GAAGTCCTTCAGGCCCTGCTAGGCCACCCTGTCTTCTCCTGGAACTaGCTGTCCTTTACTCGCAGCAATGAACCCTGGGACCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: EVLQALLGHPVFSWN*LSFTRSNEPWDLSP
Trigger: TGGGGAGAGGTCCCAGGGTTCATTGCTGCGAGTAAAGGACAGCCAGTTCCAGGAGAAGACAGGGTGGCCTAGCAGGGCCTGAAGGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493403.1
CDS-3UTR CAA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCCAGCGGGCAGCCCGGTaGATCCGCAGGATGACCAGC +
Preference number: 5 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLQRAAR*IRRMTS
Trigger: GCTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTG...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAATGCGAGCACTTGGCCTaGCCGCCGCTGAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKCEHLA*PPLSTE
Trigger: CTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCA...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCTGCGAGCACTTGGCCTaGCCGCCGCTGAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLCEHLA*PPLSTE
Trigger: CTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCA...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCCAGAACTGCGAGCACTaGGCCTTGCCGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSQNCEH*ALPPLS
Trigger: GCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTG...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCAGCGGGCAGCCCGGTaGATCCGCAGGATGACCAGC +
Preference number: 5 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPQRAAR*IRRMTS
Trigger: GCTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTG...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCGTAGGCCATGGCGGCTaGGCTCCTGAGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: RIGTPETFSKATISLPDPVGHGG*APERLR
Trigger: CCTCAGCCTCTCAGGAGCCAAGCCGCCATGGCCTAC...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
CDS-3UTR CAA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGTAGGCCATGGCGGCTaGGCTCCTGAGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKVGHGG*APERLR
Trigger: CCTCAGCCTCTCAGGAGCCAAGCCGCCATGGCCTAC...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
CDS-3UTR CAA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCTGCGAGCACTTGGCCTaGCCGCCGCTGAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTCEHLA*PPLSTE
Trigger: CTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCA...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGTAGGCCATGGCGGCTaGGCTCCCGCGCAGACGTCG +
Preference number: 5 (lower is better)
Translates to: WELVLVPQKHSAKQPLASVGHGG*APAQTS
Trigger: CGACGTCTGCGCGGGAGCCAAGCCGCCATGGCCTAC...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS TCA 90 bp CACGGTCTCAGCCCAATTCCTCAAACACATCTCTCCCCGCCTCCGTaGCTCAGTTTCCCAGCATCACAGGGACCTGTAATCCCAGCTACC +
Preference number: 5 (lower is better)
Translates to: HGLSPIPQTHLSPPP*LSFPASQGPVIPAT
Trigger: GGTAGCTGGGATTACAGGTCCCTGTGATGCTGGGAAACTGAGTCACGGAGGCGGGGAGAGATGTGTTTGAGGAATTGGGCTGAGACCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429246.6
CDS-3UTR CAA 90 bp AGCCGCAGCTACTGCTGGATTCGAACATCAGTTCCCCAAAGGGCATCTTGGAGCTTGAGCTCGTGCACCTaGGTCCATTTGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: SRSYCWIRTSVPQRASWSLSSCT*VHLAPL
Trigger: GAGCGGTGCCAAATGGACCAAGGTGCACGAGCTCAA...GCTCCAAGATGCCCTTTGGGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432343.1
ENST00000445924.5
CDS-3UTR CAA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTCAGCGGGCAGCCCGGTaGATCCGCAGGATGACCAGC +
Preference number: 5 (lower is better)
Translates to: APMGTRIGTPETFSKATIQRAAR*IRRMTS
Trigger: GCTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTG...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAGCAAACTTGTTCTCGTaGGGGGCCCAGCGCACGCAG +
Preference number: 5 (lower is better)
Translates to: GAAPMGTRIGTPETFSKAANLFS*GAQRTQ
Trigger: CTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTGC...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCGCAAACTTGTTCTCGTaGGGGGCCCAGCGCACGCAG +
Preference number: 5 (lower is better)
Translates to: RIGTPETFSKATISLPDPANLFS*GAQRTQ
Trigger: CTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTGC...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCCTGCCCACAGCAAACTaGTTCTCGTTGGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSLPTAN*FSLGAQ
Trigger: CTGGGCCCCCAACGAGAACAAGTTTGCTGTGGGCAG...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCTCGGAGCTCGCCTTCTaGTCCAGGTTCTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSSELAF*SRFWKR
Trigger: GCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCCGA...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTTGCGAGCACTTGGCCTaGCCGCCGCTGAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: APMGTRIGTPETFSKATICEHLA*PPLSTE
Trigger: CTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCA...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCAGAACTGCGAGCACTaGGCCTTGCCGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTQNCEH*ALPPLS
Trigger: GCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTG...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCAGAACTGCGAGCACTaGGCCTTGCCGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: IGTPETFSKATISLPDPSQNCEH*ALPPLS
Trigger: GCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTG...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCTTGAGCTCGTGCACCTaGGTCCATTTGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSLSSCT*VHLAPL
Trigger: GAGCGGTGCCAAATGGACCAAGGTGCACGAGCTCAA...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTACAGCGGGCAGCCCGGTaGATCCGCAGGATGACCAGC +
Preference number: 5 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLQRAAR*IRRMTS
Trigger: GCTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTG...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCCAGCGGGCAGCCCGGTaGATCCGCAGGATGACCAGC +
Preference number: 5 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAQRAAR*IRRMTS
Trigger: GCTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTG...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCAGCGGGCAGCCCGGTaGATCCGCAGGATGACCAGC +
Preference number: 5 (lower is better)
Translates to: PMGTRIGTPETFSKATISQRAAR*IRRMTS
Trigger: GCTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTG...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCGTAGGCCATGGCGGCTaGGCTCCTGTAATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLVGHGG*APVIPA
Trigger: AGCTGGGATTACAGGAGCCAAGCCGCCATGGCCTAC...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458033.6
ENST00000645391.1
CDS-3UTR CAA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACGTAGGCCATGGCGGCTaGGCTCCTGAGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: TRIGTPETFSKATISLPDVGHGG*APERLR
Trigger: CCTCAGCCTCTCAGGAGCCAAGCCGCCATGGCCTAC...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
CDS-3UTR CAA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCGCAAACTTGTTCTCGTaGGGGGCCCAGCGCACGCAG +
Preference number: 5 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTANLFS*GAQRTQ
Trigger: CTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTGC...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCACTGCCCACAGCAAACTaGTTCTCGTTGGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GAAPMGTRIGTPETFSKALPTAN*FSLGAQ
Trigger: CTGGGCCCCCAACGAGAACAAGTTTGCTGTGGGCAG...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCCTGCCCACAGCAAACTaGTTCTCGTTGGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLLPTAN*FSLGAQ
Trigger: CTGGGCCCCCAACGAGAACAAGTTTGCTGTGGGCAG...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAATCGGAGCTCGCCTTCTaGTCCAGGTTCTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKSELAF*SRFWKR
Trigger: GCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCCGA...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCTCGGAGCTCGCCTTCTaGTCCAGGTTCTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLSELAF*SRFWKR
Trigger: GCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCCGA...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCATGGCTGACGCTGTTCTaGTGCAGCGAGTCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: GAAPMGTRIGTPETFSKAWLTLF*CSESRP
Trigger: GGGCCTAGACTCGCTGCACAAGAACAGCGTCAGCCA...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTGCGAGCACTTGGCCTaGCCGCCGCTGAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: LWELVLVPQKHSAKQPLACEHLA*PPLSTE
Trigger: CTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCA...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTATGCGAGCACTTGGCCTaGCCGCCGCTGAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLCEHLA*PPLSTE
Trigger: CTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCA...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCAGAACTGCGAGCACTaGGCCTTGCCGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: TRIGTPETFSKATISLPDQNCEH*ALPPLS
Trigger: GCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTG...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCAGAACTGCGAGCACTaGGCCTTGCCGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: WELVLVPQKHSAKQPLASQNCEH*ALPPLS
Trigger: GCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTG...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTCAGAACTGCGAGCACTaGGCCTTGCCGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: APMGTRIGTPETFSKATIQNCEH*ALPPLS
Trigger: GCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTG...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS CCA 90 bp TGGCCATGGTGGGATGCAAATTTGGGTCTCTCAGATGCTCCTGGCTaGCCTCTGCCCTCAGCCATGCAGGGGAGATTAAAAACTAAGACG +
Preference number: 5 (lower is better)
Translates to: WPWWDANLGLSDAPG*PLPSAMQGRLKTKT
Trigger: CGTCTTAGTTTTTAATCTCCCCTGCATGGCTGAGGGCAGAGGCCAGCCAGGAGCATCTGAGAGACCCAAATTTGCATCCCACCATGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468337.1
CDS-3UTR CAA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTTGAGCTCGTGCACCTaGGTCCATTTGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: RIGTPETFSKATISLPDPLSSCT*VHLAPL
Trigger: GAGCGGTGCCAAATGGACCAAGGTGCACGAGCTCAA...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAATTGAGCTCGTGCACCTaGGTCCATTTGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKLSSCT*VHLAPL
Trigger: GAGCGGTGCCAAATGGACCAAGGTGCACGAGCTCAA...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCGTAGGCCATGGCGGCTaGGCTCCTGAGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: PMGTRIGTPETFSKATISVGHGG*APERLR
Trigger: CCTCAGCCTCTCAGGAGCCAAGCCGCCATGGCCTAC...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
CDS-3UTR CAA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTGCAAACTTGTTCTCGTaGGGGGCCCAGCGCACGCAG +
Preference number: 5 (lower is better)
Translates to: APMGTRIGTPETFSKATIANLFS*GAQRTQ
Trigger: CTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTGC...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTGCCCACAGCAAACTaGTTCTCGTTGGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPLPTAN*FSLGAQ
Trigger: CTGGGCCCCCAACGAGAACAAGTTTGCTGTGGGCAG...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GCTCGTGCACCTTGGTCCATTTGGCACCGCTCTTTTCATAGATATGCACCTCATCTGCCCACAGCAAACTaGTTCTCGTTGGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: ARAPWSIWHRSFHRYAPHLPTAN*FSLGAQ
Trigger: CTGGGCCCCCAACGAGAACAAGTTTGCTGTGGGCAG...ATGAGGTGCATATCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGCACGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR CAA 90 bp GGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCGAGCGGATGGGCTTCTaGATGTGCTTGCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: GSSPYGNSYWYPRNIQQSERMGF*MCLQTH
Trigger: GTGGGTTTGCAAGCACATCAAGAAGCCCATCCGCTC...GCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTTCGGAGCTCGCCTTCTaGTCCAGGTTCTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPSELAF*SRFWKR
Trigger: GCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCCGA...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCTGGCTGACGCTGTTCTaGTGCAGCGAGTCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTWLTLF*CSESRP
Trigger: GGGCCTAGACTCGCTGCACAAGAACAGCGTCAGCCA...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTTTGAGCTCGTGCACCTaGGTCCATTTGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPLSSCT*VHLAPL
Trigger: GAGCGGTGCCAAATGGACCAAGGTGCACGAGCTCAA...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTTTGAGCTCGTGCACCTaGGTCCATTTGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: IGTPETFSKATISLPDPSLSSCT*VHLAPL
Trigger: GAGCGGTGCCAAATGGACCAAGGTGCACGAGCTCAA...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCGCAAACTTGTTCTCGTaGGGGGCCCAGCGCACGCAG +
Preference number: 5 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAANLFS*GAQRTQ
Trigger: CTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTGC...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCGCAAACTTGTTCTCGTaGGGGGCCCAGCGCACGCAG +
Preference number: 5 (lower is better)
Translates to: PMGTRIGTPETFSKATISANLFS*GAQRTQ
Trigger: CTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTGC...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCGCAAACTTGTTCTCGTaGGGGGCCCAGCGCACGCAG +
Preference number: 5 (lower is better)
Translates to: MGTRIGTPETFSKATISLANLFS*GAQRTQ
Trigger: CTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTGC...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGCCCACAGCAAACTaGTTCTCGTTGGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: WELVLVPQKHSAKQPLASLPTAN*FSLGAQ
Trigger: CTGGGCCCCCAACGAGAACAAGTTTGCTGTGGGCAG...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCGAGCGGATGGGCTTCTaGATGTGCTTGCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLERMGF*MCLQTH
Trigger: GTGGGTTTGCAAGCACATCAAGAAGCCCATCCGCTC...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTTGGCTGACGCTGTTCTaGTGCAGCGAGTCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: APMGTRIGTPETFSKATIWLTLF*CSESRP
Trigger: GGGCCTAGACTCGCTGCACAAGAACAGCGTCAGCCA...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS TCA 90 bp CAACATATTCCTCACAGGTCATTTGATCTTGAGGTCCTTCAAGGCTaGCTCCAAGCTCTGCAGGGAGGCAGAACGGACAGGCTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: QHIPHRSFDLEVLQG*LQALQGGRTDRLVL
Trigger: GAGAACCAGCCTGTCCGTTCTGCCTCCCTGCAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGTGAGGAATATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463078.1
ENST00000491294.1
CDS CCA 90 bp CAAAGTGATGCCATCACCAGAGGTCACACAACTACTAACTGGCCATaGTGGGATGCAAATTTGGGTCTCTCAGATGCTCCTGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: QSDAITRGHTTTNWP*WDANLGLSDAPGWP
Trigger: AGGCCAGCCAGGAGCATCTGAGAGACCCAAATTTGCATCCCACCATGGCCAGTTAGTAGTTGTGTGACCTCTGGTGATGGCATCACTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468337.1
CDS CCA 90 bp GCTCAGCAAAGTGATGCCATCACCAGAGGTCACACAACTACTAACTaGCCATGGTGGGATGCAAATTTGGGTCTCTCAGATGCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: AQQSDAITRGHTTTN*PWWDANLGLSDAPG
Trigger: GCCAGGAGCATCTGAGAGACCCAAATTTGCATCCCACCATGGCCAGTTAGTAGTTGTGTGACCTCTGGTGATGGCATCACTTTGCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468337.1
CDS-3UTR CAA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTTGCACCTCATGGTTGTaGGGGCAGATGGCAATCTGG +
Preference number: 5 (lower is better)
Translates to: IGTPETFSKATISLPDPSCTSWL*GQMAIW
Trigger: CCAGATTGCCATCTGCCCCAACAACCATGAGGTGCA...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCTTGAGCTCGTGCACCTaGGTCCATTTGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: WELVLVPQKHSAKQPLASLSSCT*VHLAPL
Trigger: GAGCGGTGCCAAATGGACCAAGGTGCACGAGCTCAA...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCGTAGGCCATGGCGGCTaGGCTCCTGTAATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LWELVLVPQKHSAKQPLAVGHGG*APVIPA
Trigger: AGCTGGGATTACAGGAGCCAAGCCGCCATGGCCTAC...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458033.6
ENST00000645391.1
CDS-3UTR CAA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCTGCCCACAGCAAACTaGTTCTCGTTGGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: MGTRIGTPETFSKATISLLPTAN*FSLGAQ
Trigger: CTGGGCCCCCAACGAGAACAAGTTTGCTGTGGGCAG...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTGAGCGGATGGGCTTCTaGATGTGCTTGCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: IGTPETFSKATISLPDPSERMGF*MCLQTH
Trigger: GTGGGTTTGCAAGCACATCAAGAAGCCCATCCGCTC...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCTCGGAGCTCGCCTTCTaGTCCAGGTTCTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: PMGTRIGTPETFSKATISSELAF*SRFWKR
Trigger: GCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCCGA...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTATCGGAGCTCGCCTTCTaGTCCAGGTTCTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLSELAF*SRFWKR
Trigger: GCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCCGA...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTATGGCTGACGCTGTTCTaGTGCAGCGAGTCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLWLTLF*CSESRP
Trigger: GGGCCTAGACTCGCTGCACAAGAACAGCGTCAGCCA...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCTGGCTGACGCTGTTCTaGTGCAGCGAGTCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: MGTRIGTPETFSKATISLWLTLF*CSESRP
Trigger: GGGCCTAGACTCGCTGCACAAGAACAGCGTCAGCCA...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACGATCTGACGCTGTTCTaGTGCAGCGAGTCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: TRIGTPETFSKATISLPDDLTLF*CSESRP
Trigger: GGGCCTAGACTCGCTGCACAAGAACAGCGTCAGATC...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR CAA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCTGCACCTCATGGTTGTaGGGGCAGATGGCAATCTGG +
Preference number: 5 (lower is better)
Translates to: WELVLVPQKHSAKQPLASCTSWL*GQMAIW
Trigger: CCAGATTGCCATCTGCCCCAACAACCATGAGGTGCA...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAATATGCACCTCATGGTaGTTGGGGCAGATGGCAATC +
Preference number: 5 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKICTSW*LGQMAI
Trigger: GATTGCCATCTGCCCCAACAACCATGAGGTGCATAT...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCATATGCACCTCATGGTaGTTGGGGCAGATGGCAATC +
Preference number: 5 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLICTSW*LGQMAI
Trigger: GATTGCCATCTGCCCCAACAACCATGAGGTGCATAT...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTTGAGCTCGTGCACCTaGGTCCATTTGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: LWELVLVPQKHSAKQPLALSSCT*VHLAPL
Trigger: GAGCGGTGCCAAATGGACCAAGGTGCACGAGCTCAA...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACGAGCGGATGGGCTTCTaGATGTGCTTGCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: TRIGTPETFSKATISLPDERMGF*MCLQTH
Trigger: GTGGGTTTGCAAGCACATCAAGAAGCCCATCCGCTC...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTGAGCGGATGGGCTTCTaGATGTGCTTGCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: APMGTRIGTPETFSKATIERMGF*MCLQTH
Trigger: GTGGGTTTGCAAGCACATCAAGAAGCCCATCCGCTC...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGAGCGGATGGGCTTCTaGATGTGCTTGCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: WELVLVPQKHSAKQPLASERMGF*MCLQTH
Trigger: GTGGGTTTGCAAGCACATCAAGAAGCCCATCCGCTC...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTGAAAAGATCCGACACTaGAAGTCACAGGAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: IGTPETFSKATISLPDPSEKIRH*KSQEPA
Trigger: TGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTTC...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTGAAAAGATCCGACACTaGAAGTCACAGGAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPEKIRH*KSQEPA
Trigger: TGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTTC...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GCTCGTGCACCTTGGTCCATTTGGCACCGCTCTTTTCATAGATATGCACCTCATTGCACCTCATGGTTGTaGGGGCAGATGGCAATCTCT +
Preference number: 5 (lower is better)
Translates to: ARAPWSIWHRSFHRYAPHCTSWL*GQMAIS
Trigger: AGAGATTGCCATCTGCCCCAACAACCATGAGGTGCA...ATGAGGTGCATATCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGCACGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR CAA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCTGCACCTCATGGTTGTaGGGGCAGATGGCAATCTGG +
Preference number: 5 (lower is better)
Translates to: PMGTRIGTPETFSKATISCTSWL*GQMAIW
Trigger: CCAGATTGCCATCTGCCCCAACAACCATGAGGTGCA...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CATTTGATCTTGAGGTCCTTCAAGGCTGACTCCAAGCTCTTCACATCCCAGATATGCACCTCATGGTTGTaGGGGCAGATGGCAATCTGG +
Preference number: 5 (lower is better)
Translates to: HLILRSFKADSKLFTSQICTSWL*GQMAIW
Trigger: CCAGATTGCCATCTGCCCCAACAACCATGAGGTGCA...TATCTGGGATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS-3UTR CAA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTATATGCACCTCATGGTaGTTGGGGCAGATGGCAATC +
Preference number: 5 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPICTSW*LGQMAI
Trigger: GATTGCCATCTGCCCCAACAACCATGAGGTGCATAT...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGAGCGGATGGGCTTCTaGATGTGCTTGCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLERMGF*MCLQTH
Trigger: GTGGGTTTGCAAGCACATCAAGAAGCCCATCCGCTC...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCATTTGGCACCGCTCTTTTCATAGATATGCACCTCATGGTTGTTGGGGCAGATGAAAAGATCCGACACTaGAAGTCACAGGAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: PFGTALFIDMHLMVVGADEKIRH*KSQEPA
Trigger: TGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTTC...ATCTGCCCCAACAACCATGAGGTGCATATCTATGAAAAGAGCGGTGCCAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS-3UTR CAA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCGAAAAGATCCGACACTaGAAGTCACAGGAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: WELVLVPQKHSAKQPLASEKIRH*KSQEPA
Trigger: TGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTTC...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTGAAAAGATCCGACACTaGAAGTCACAGGAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: APMGTRIGTPETFSKATIEKIRH*KSQEPA
Trigger: TGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTTC...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACGAAAAGATCCGACACTaGAAGTCACAGGAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: TRIGTPETFSKATISLPDEKIRH*KSQEPA
Trigger: TGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTTC...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCACAGGTCATTTGATCTaGAGGTCCTTCAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: RIGTPETFSKATISLPDPTGHLI*RSFKAD
Trigger: GTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGT...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCATATGCACCTCATGGTaGTTGGGGCAGATGGCAATC +
Preference number: 5 (lower is better)
Translates to: WELVLVPQKHSAKQPLASICTSW*LGQMAI
Trigger: GATTGCCATCTGCCCCAACAACCATGAGGTGCATAT...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTATATGCACCTCATGGTaGTTGGGGCAGATGGCAATC +
Preference number: 5 (lower is better)
Translates to: APMGTRIGTPETFSKATIICTSW*LGQMAI
Trigger: GATTGCCATCTGCCCCAACAACCATGAGGTGCATAT...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCGAAAAGATCCGACACTaGAAGTCACAGGAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: MGTRIGTPETFSKATISLEKIRH*KSQEPA
Trigger: TGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTTC...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGAAAAGATCCGACACTaGAAGTCACAGGAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLEKIRH*KSQEPA
Trigger: TGCCGGCTCCTGTGACTTCAAGTGTCGGATCTTTTC...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTACAGGTCATTTGATCTaGAGGTCCTTCAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: IGTPETFSKATISLPDPSTGHLI*RSFKAD
Trigger: GTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGT...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTTCCTCACAGGTCATTaGATCTTGAGGTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: RIGTPETFSKATISLPDPFLTGH*ILRSFK
Trigger: CTTGAAGGACCTCAAGATCAAATGACCTGTGAGGAA...GGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAATTCCTCACAGGTCATTaGATCTTGAGGTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKFLTGH*ILRSFK
Trigger: CTTGAAGGACCTCAAGATCAAATGACCTGTGAGGAA...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTCCTATGGGAACTCGTATaGGTACCCCAGAAACATTCA +
Preference number: 5 (lower is better)
Translates to: LVPQKHSAKQPLASLTPLLWELV*VPQKHS
Trigger: TGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG...GAGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCACTATGGGAACTCGTATaGGTACCCCAGAAACATTCA +
Preference number: 5 (lower is better)
Translates to: GAAPMGTRIGTPETFSKALWELV*VPQKHS
Trigger: TGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG...TGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAATATGCACCTCATGGTaGTTGGGGCAGATGGCAATC +
Preference number: 5 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLICTSW*LGQMAI
Trigger: GATTGCCATCTGCCCCAACAACCATGAGGTGCATAT...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCATATGCACCTCATGGTaGTTGGGGCAGATGGCAATC +
Preference number: 5 (lower is better)
Translates to: MGTRIGTPETFSKATISLICTSW*LGQMAI
Trigger: GATTGCCATCTGCCCCAACAACCATGAGGTGCATAT...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACACAAGACACTTCAGTTaGTACAGGAGGAAACCCAGG +
Preference number: 5 (lower is better)
Translates to: TRIGTPETFSKATISLPDTRHFS*YRRKPR
Trigger: CCTGGGTTTCCTCCTGTACAAACTGAAGTGTCTTGT...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451682.5
CDS-3UTR CAA 90 bp GCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTACAGGTCATTTGATCTaGAGGTCCTTCAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: APMGTRIGTPETFSKATITGHLI*RSFKAD
Trigger: GTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGT...AATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp TGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCACAGGTCATTTGATCTaGAGGTCCTTCAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: WELVLVPQKHSAKQPLASTGHLI*RSFKAD
Trigger: GTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGT...GGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCTTCCTCACAGGTCATTaGATCTTGAGGTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: LVLVPQKHSAKQPLASLTFLTGH*ILRSFK
Trigger: CTTGAAGGACCTCAAGATCAAATGACCTGTGAGGAA...GGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GAGGGAGCAGCCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAATATTACCTCCACATTTaGAAGCAGTTCATGACCAGC +
Preference number: 5 (lower is better)
Translates to: EGAAPMGTRIGTPETFSKYYLHI*KQFMTS
Trigger: GCTGGTCATGAACTGCTTCAAAATGTGGAGGTAATA...TTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGGCTGCTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000427217.6
ENST00000443222.6
ENST00000451682.5
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCACAGGTCATTTGATCTaGAGGTCCTTCAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: MGTRIGTPETFSKATISLTGHLI*RSFKAD
Trigger: GTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGT...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCACAGGTCATTTGATCTaGAGGTCCTTCAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: LWELVLVPQKHSAKQPLATGHLI*RSFKAD
Trigger: GTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGT...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCTATGGGAACTCGTATaGGTACCCCAGAAACATTCA +
Preference number: 5 (lower is better)
Translates to: TRIGTPETFSKATISLPDLWELV*VPQKHS
Trigger: TGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp GTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTTATTACCTCCACATTTaGAAGCAGTTCATGACCAGC +
Preference number: 5 (lower is better)
Translates to: VLVPQKHSAKQPLASLTPYYLHI*KQFMTS
Trigger: GCTGGTCATGAACTGCTTCAAAATGTGGAGGTAATA...AGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000427217.6
ENST00000443222.6
ENST00000451682.5
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACCCCTCTTATTACCTCCACATTTaGAAGCAGTTCATGACCAGC +
Preference number: 5 (lower is better)
Translates to: IGTPETFSKATISLPDPSYYLHI*KQFMTS
Trigger: GCTGGTCATGAACTGCTTCAAAATGTGGAGGTAATA...AGAGGGGTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000427217.6
ENST00000443222.6
ENST00000451682.5
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTATTCCTCACAGGTCATTaGATCTTGAGGTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLFLTGH*ILRSFK
Trigger: CTTGAAGGACCTCAAGATCAAATGACCTGTGAGGAA...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCTTCCTCACAGGTCATTaGATCTTGAGGTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: MGTRIGTPETFSKATISLFLTGH*ILRSFK
Trigger: CTTGAAGGACCTCAAGATCAAATGACCTGTGAGGAA...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTATGGGAACTCGTATaGGTACCCCAGAAACATTCA +
Preference number: 5 (lower is better)
Translates to: PMGTRIGTPETFSKATISLWELV*VPQKHS
Trigger: TGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG...GCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCCTATGGGAACTCGTATaGGTACCCCAGAAACATTCA +
Preference number: 5 (lower is better)
Translates to: LWELVLVPQKHSAKQPLALWELV*VPQKHS
Trigger: TGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG...GGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp CCCCTATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTACTATGGGAACTCGTATaGGTACCCCAGAAACATTCA +
Preference number: 5 (lower is better)
Translates to: PLWELVLVPQKHSAKQPLLWELV*VPQKHS
Trigger: TGAATGTTTCTGGGGTACCAATACGAGTTCCCATAG...TAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCATAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCCCTGACTATTACCTCCACATTTaGAAGCAGTTCATGACCAGC +
Preference number: 5 (lower is better)
Translates to: TRIGTPETFSKATISLPDYYLHI*KQFMTS
Trigger: GCTGGTCATGAACTGCTTCAAAATGTGGAGGTAATA...GTCAGGGAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000427217.6
ENST00000443222.6
ENST00000451682.5
ENST00000645391.1
ENST00000646101.2
CDS-3UTR CAA 90 bp ATGGGAACTCGTATTGGTACCCCAGAAACATTCAGCAAAGCAACCATTAGCCTCTATTACCTCCACATTTaGAAGCAGTTCATGACCAGC +
Preference number: 5 (lower is better)
Translates to: MGTRIGTPETFSKATISLYYLHI*KQFMTS
Trigger: GCTGGTCATGAACTGCTTCAAAATGTGGAGGTAATA...GAGGCTAATGGTTGCTTTGCTGAATGTTTCTGGGGTACCAATACGAGTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000427217.6
ENST00000443222.6
ENST00000451682.5
ENST00000645391.1
ENST00000646101.2
CDS TCA 72 bp GGACTGCCGGGCGCAGGGTCGGGGAGTCACGTCCTCTaGGCCCGGACGGCGGGTACTGCGGGCTCCGCGCTC +
Preference number: 6 (lower is better)
Translates to: GLPGAGSGSHVL*ARTAGTAGSAL
Trigger: GAGCGCGGAGCCCGCAGTACCCGCCGTCCGGGCTCAGAGGACGTGACTCCCCGACCCTGCGCCCGGCAGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414376.5
ENST00000443222.6
CDS TCA 72 bp ACGGCGGGTACTGCGGGCTCCGCGCTCACACGCAGGTaGGCGGCTAGCGAGCCCTGCAGCCCCGTCGGCAGC +
Preference number: 6 (lower is better)
Translates to: TAGTAGSALTRR*AASEPCSPVGS
Trigger: GCTGCCGACGGGGCTGCAGGGCTCGCTAGCCGCTCACCTGCGTGTGAGCGCGGAGCCCGCAGTACCCGCCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414376.5
ENST00000443222.6
CDS CAA 90 bp TCTAGGCCCGCGCCCGCAGCCGTGCCACCCTCGGAGCTCGCCTTCTaGTCCAGGTTCTGGAAGCGCTCGCGGGCCGTCAAGCCACGCTGC +
Preference number: 6 (lower is better)
Translates to: SRPAPAAVPPSELAF*SRFWKRSRAVKPRC
Trigger: GCAGCGTGGCTTGACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCCGAGGGTGGCACGGCTGCGGGCGCGGGCCTAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000417330.6
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS CAA 72 bp GCGCCCGCAGCCGTGCCACCCTCGGAGCTCGCCTTCTaGTCCAGGTTCTGGAAGCGCTCGCGGGCCGTCAAG +
Preference number: 6 (lower is better)
Translates to: APAAVPPSELAF*SRFWKRSRAVK
Trigger: CTTGACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCCGAGGGTGGCACGGCTGCGGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000417330.6
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS GCA 72 bp AAGCGCTCGCGGGCCGTCAAGCCACGCTGCGAGCTCTaGTTAGGAACGTCCAGCCGCCCGCCGAAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: KRSRAVKPRCEL*LGTSSRPPKLS
Trigger: GCTGAGCTTCGGCGGGCGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGGCTTGACGGCCCGCGAGCGCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000417330.6
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS GCA 72 bp AGGTTCTGGAAGCGCTCGCGGGCCGTCAAGCCACGCTaGGAGCTCTGCTTAGGAACGTCCAGCCGCCCGCCG +
Preference number: 6 (lower is better)
Translates to: RFWKRSRAVKPR*ELCLGTSSRPP
Trigger: CGGCGGGCGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGGCTTGACGGCCCGCGAGCGCTTCCAGAACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000417330.6
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS GCA 72 bp GCCGCCGCTGAGCACCGAGATCTGACGCTGTTCTTGTaGAGCGAGTCTAGGCCCGCGCCCGCAGCCGTGCCA +
Preference number: 6 (lower is better)
Translates to: AAAEHRDLTLFL*SESRPAPAAVP
Trigger: TGGCACGGCTGCGGGCGCGGGCCTAGACTCGCTGCACAAGAACAGCGTCAGATCTCGGTGCTCAGCGGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS CAA 72 bp AGCCCACCAAAGACCCAGGAGAGAGGCGACTGGGCATaGCCAGCCCACAAGGCCGTCAGGGCCCTGGGGCGG +
Preference number: 6 (lower is better)
Translates to: SPPKTQERGDWA*PAHKAVRALGR
Trigger: CCGCCCCAGGGCCCTGACGGCCTTGTGGGCTGGCAATGCCCAGTCGCCTCTCTCCTGGGTCTTTGGTGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468337.1
CDS GCA 72 bp CCGCTGAGCACCGAGATCTGGCTGACGCTGTTCTTGTaGAGCGAGTCTAGGCCCGCGCCCGCAGCCGTGCCA +
Preference number: 6 (lower is better)
Translates to: PLSTEIWLTLFL*SESRPAPAAVP
Trigger: TGGCACGGCTGCGGGCGCGGGCCTAGACTCGCTGCACAAGAACAGCGTCAGCCAGATCTCGGTGCTCAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS CCA 72 bp GTGCCACCCTCGGAGCTCGCCTTCTTGTCCAGGTTCTaGAAGCGCTCGCGGGCCGTCAAGCCACGCTGCGAG +
Preference number: 6 (lower is better)
Translates to: VPPSELAFLSRF*KRSRAVKPRCE
Trigger: CTCGCAGCGTGGCTTGACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCCGAGGGTGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000417330.6
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS GCA 72 bp TCTTGTGCAGCGAGTCTAGGCCCGCGCCCGCAGCCGTaGCACCCTCGGAGCTCGCCTTCTTGTCCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: SCAASLGPRPQP*HPRSSPSCPGS
Trigger: AGAACCTGGACAAGAAGGCGAGCTCCGAGGGTGGCACGGCTGCGGGCGCGGGCCTAGACTCGCTGCACAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000417330.6
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS TCA 72 bp GTCGTGGCTTACCCAGGCCACGCGGCTCCCGCTGGCTaGGAAACAGACGCCATGTACCCAGCCGCAGCTACT +
Preference number: 6 (lower is better)
Translates to: VVAYPGHAAPAG*ETDAMYPAAAT
Trigger: AGTAGCTGCGGCTGGGTACATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGCGTGGCCTGGGTAAGCCACGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000417330.6
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000484375.5
ENST00000645391.1
ENST00000646101.2
CDS TCA 72 bp GCTGTCGGGTGCGGTCCTTGTTCCAGGCGTGGCAGCTaGTGGGCTCCACCAGGAAGCTGTGGTAGGCCATGG +
Preference number: 6 (lower is better)
Translates to: AVGCGPCSRRGS*WAPPGSCGRPW
Trigger: CCATGGCCTACCACAGCTTCCTGGTGGAGCCCATCAGCTGCCACGCCTGGAACAAGGACCGCACCCGACAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS CAA 72 bp GGGCTCCACCAGGAAGCTGTGGTAGGCCATGGCGGCTaGGCTCCTGCCGCTGAGTGTCAAAGGAGCCCACCA +
Preference number: 6 (lower is better)
Translates to: GLHQEAVVGHGG*APAAECQRSPP
Trigger: TGGTGGGCTCCTTTGACACTCAGCGGCAGGAGCCAAGCCGCCATGGCCTACCACAGCTTCCTGGTGGAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429246.6
CDS CAA 72 bp CCGCCATCCATGCCAGTGGTGCAGAACTGCGAGCACTaGGCCTTGCCGCCGCTGAGCACCGAGATCTGGCTG +
Preference number: 6 (lower is better)
Translates to: PPSMPVVQNCEH*ALPPLSTEIWL
Trigger: CAGCCAGATCTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS GCA 72 bp GGGAGGCAGAACGGACAGGCTGGTTCTCAGCTGTCCTaGAGGCACCCCACTCCCAGGGACCTGATCACCCAT +
Preference number: 6 (lower is better)
Translates to: GRQNGQAGSQLS*RHPTPRDLITH
Trigger: ATGGGTGATCAGGTCCCTGGGAGTGGGGTGCCTGCAGGACAGCTGAGAACCAGCCTGTCCGTTCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463078.1
ENST00000491294.1
CDS CCA 72 bp GTCCTTCAGGCCCTGCTAGGCCACCCTGTCTTCTCCTaGAACTGGCTGTCGGGTGCGGTCCTTGTTCCAGGC +
Preference number: 6 (lower is better)
Translates to: VLQALLGHPVFS*NWLSGAVLVPG
Trigger: GCCTGGAACAAGGACCGCACCCGACAGCCAGTTCCAGGAGAAGACAGGGTGGCCTAGCAGGGCCTGAAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445924.5
CDS CAA 72 bp TCCATGCCAGTGGTGCAGAACTGCGAGCACTTGGCCTaGCCGCCGCTGAGCACCGAGATCTGGCTGACGCTG +
Preference number: 6 (lower is better)
Translates to: SMPVVQNCEHLA*PPLSTEIWLTL
Trigger: CAGCGTCAGCCAGATCTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTGCACCACTGGCATGGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS CAA 90 bp ATGCCGCCATCCATGCCAGTGGTGCAGAACTGCGAGCACTTGGCCTaGCCGCCGCTGAGCACCGAGATCTGGCTGACGCTGTTCTTGTGC +
Preference number: 6 (lower is better)
Translates to: MPPSMPVVQNCEHLA*PPLSTEIWLTLFLC
Trigger: GCACAAGAACAGCGTCAGCCAGATCTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCGGCAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS GCA 72 bp ATACTCATGCCGCCATCCATGCCAGTGGTGCAGAACTaGGAGCACTTGGCCTTGCCGCCGCTGAGCACCGAG +
Preference number: 6 (lower is better)
Translates to: ILMPPSMPVVQN*EHLALPPLSTE
Trigger: CTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCGGCATGAGTAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS GCA 72 bp CGCAGCAATGAACCCTGGGACCTCTCCCCACCCTATTaGTCTGGCCAACCAGGAACCCTTCGCTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RSNEPWDLSPPY*SGQPGTLRCSC
Trigger: GCAGGAGCAGCGAAGGGTTCCTGGTTGGCCAGAGCAATAGGGTGGGGAGAGGTCCCAGGGTTCATTGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493403.1
CDS CAA 90 bp ATACTCATGCCGCCATCCATGCCAGTGGTGCAGAACTGCGAGCACTaGGCCTTGCCGCCGCTGAGCACCGAGATCTGGCTGACGCTGTTC +
Preference number: 6 (lower is better)
Translates to: ILMPPSMPVVQNCEH*ALPPLSTEIWLTLF
Trigger: GAACAGCGTCAGCCAGATCTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCGGCATGAGTAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000491294.1
ENST00000645391.1
ENST00000646101.2
CDS TCA 72 bp TGGTGCAGAACTGCGAGCACTTGGCCTTGCCGCCGCTaGGCACCGAGATCTGACGCTGTTCTTGTGCAGCGA +
Preference number: 6 (lower is better)
Translates to: WCRTASTWPCRR*APRSDAVLVQR
Trigger: TCGCTGCACAAGAACAGCGTCAGATCTCGGTGCTCAGCGGCGGCAAGGCCAAGTGCTCGCAGTTCTGCACCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443222.6
CDS TCA 72 bp CCCACGGGGTGGGTGCCGGCCGTTCCTCCACCTCCTTaGTGTAGGCTGAAAAGATCCTACCGGGATAGGCAA +
Preference number: 6 (lower is better)
Translates to: PTGWVPAVPPPP*CRLKRSYRDRQ
Trigger: TTGCCTATCCCGGTAGGATCTTTTCAGCCTACATCAAGGAGGTGGAGGAACGGCCGGCACCCACCCCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481997.5
CDS CCA 72 bp GAGGGCAGAGAACCTGCAGTTTTGGAGTCTGTCAGCTaGGTTGGAATCCCGGCCCTGAAGACGGGTGCCCCA +
Preference number: 6 (lower is better)
Translates to: EGREPAVLESVS*VGIPALKTGAP
Trigger: TGGGGCACCCGTCTTCAGGGCCGGGATTCCAACCCAGCTGACAGACTCCAAAACTGCAGGTTCTCTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491294.1
CDS CAA 72 bp AGCCCCAGCACAGCAGAGGGCAGAGAACCTGCAGTTTaGGAGTCTGTCAGCTGGGTTGGAATCCCGGCCCTG +
Preference number: 6 (lower is better)
Translates to: SPSTAEGREPAV*ESVSWVGIPAL
Trigger: CAGGGCCGGGATTCCAACCCAGCTGACAGACTCCAAAACTGCAGGTTCTCTGCCCTCTGCTGTGCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491294.1
CDS GCA 72 bp GAGGGGCAAGCCTCACCTTCACATCCCAGATACTCATaGCGCCATCCATGCCAGTGGTGCAGAACTGCGAGC +
Preference number: 6 (lower is better)
Translates to: EGQASPSHPRYS*RHPCQWCRTAS
Trigger: GCTCGCAGTTCTGCACCACTGGCATGGATGGCGGCATGAGTATCTGGGATGTGAAGGTGAGGCTTGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491294.1
CDS CCA 72 bp CAGGCCCTGCTAGGCCACCCTGTCTTCTCCTGGAACTaGCTGTCCTTTACTCGCAGCAATGAACCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: QALLGHPVFSWN*LSFTRSNEPWD
Trigger: GTCCCAGGGTTCATTGCTGCGAGTAAAGGACAGCCAGTTCCAGGAGAAGACAGGGTGGCCTAGCAGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493403.1
CDS GCA 72 bp GCAGAGGGCAGAGAACCTTCACATCCCAGATACTCATaGCGCCATCCATGCCAGTGGTGCAGAACTGCGAGC +
Preference number: 6 (lower is better)
Translates to: AEGREPSHPRYS*RHPCQWCRTAS
Trigger: GCTCGCAGTTCTGCACCACTGGCATGGATGGCGGCATGAGTATCTGGGATGTGAAGGTTCTCTGCCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463078.1
CDS GCA 72 bp AGCTCTTCACATCCCAGATACTCATGCCGCCATCCATaGCAGTGGTGCAGAACTGCGAGCACTTGGCCTTGC +
Preference number: 6 (lower is better)
Translates to: SSSHPRYSCRHP*QWCRTASTWPC
Trigger: GCAAGGCCAAGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCGGCATGAGTATCTGGGATGTGAAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000645391.1
ENST00000646101.2
CDS GCA 72 bp AGGCTGACTCCAAGCTCTTCACATCCCAGATACTCATaGCGCCATCCATGCCAGTGGTGCAGAACTGCGAGC +
Preference number: 6 (lower is better)
Translates to: RLTPSSSHPRYS*RHPCQWCRTAS
Trigger: GCTCGCAGTTCTGCACCACTGGCATGGATGGCGGCATGAGTATCTGGGATGTGAAGAGCTTGGAGTCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000645391.1
ENST00000646101.2
CDS GCA 72 bp GGGATGTGCTGTGTCGCTTCTGGAGTGGGAACTCTGTaGCCTCTATCCTTTAGGCCACACAGTCACCCTCAG +
Preference number: 6 (lower is better)
Translates to: GMCCVASGVGTL*PLSFRPHSHPQ
Trigger: CTGAGGGTGACTGTGTGGCCTAAAGGATAGAGGGCACAGAGTTCCCACTCCAGAAGCGACACAGCACATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468337.1
CDS GCA 72 bp GAACCTTCACATCCCAGATACTCATGCCGCCATCCATaGCAGTGGTGCAGAACTGCGAGCACTTGGCCTTGC +
Preference number: 6 (lower is better)
Translates to: EPSHPRYSCRHP*QWCRTASTWPC
Trigger: GCAAGGCCAAGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCGGCATGAGTATCTGGGATGTGAAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463078.1
CDS GCA 72 bp TCACCTTCACATCCCAGATACTCATGCCGCCATCCATaGCAGTGGTGCAGAACTGCGAGCACTTGGCCTTGC +
Preference number: 6 (lower is better)
Translates to: SPSHPRYSCRHP*QWCRTASTWPC
Trigger: GCAAGGCCAAGTGCTCGCAGTTCTGCACCACTGGCATGGATGGCGGCATGAGTATCTGGGATGTGAAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491294.1
CDS TCA 72 bp CCTCACAGGTCATTTGATCTTGAGGTCCTTCAAGGCTaGCTCCAAGCTCTGCAGGGAGGCAGAACGGACAGG +
Preference number: 6 (lower is better)
Translates to: PHRSFDLEVLQG*LQALQGGRTDR
Trigger: CCTGTCCGTTCTGCCTCCCTGCAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463078.1
ENST00000491294.1
CDS TCA 72 bp AGCCCAATTCCTCAAACACATCTCTCCCCGCCTCCGTaGCTCAGTTTCCCAGCATCACAGGGACCTGTAATC +
Preference number: 6 (lower is better)
Translates to: SPIPQTHLSPPP*LSFPASQGPVI
Trigger: GATTACAGGTCCCTGTGATGCTGGGAAACTGAGTCACGGAGGCGGGGAGAGATGTGTTTGAGGAATTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429246.6
CDS CCA 72 bp TGGGATGCAAATTTGGGTCTCTCAGATGCTCCTGGCTaGCCTCTGCCCTCAGCCATGCAGGGGAGATTAAAA +
Preference number: 6 (lower is better)
Translates to: WDANLGLSDAPG*PLPSAMQGRLK
Trigger: TTTTAATCTCCCCTGCATGGCTGAGGGCAGAGGCCAGCCAGGAGCATCTGAGAGACCCAAATTTGCATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468337.1
CDS CCA 72 bp ACACAACTACTAACTGGCCATGGTGGGATGCAAATTTaGGTCTCTCAGATGCTCCTGGCTGGCCTCTGCCCT +
Preference number: 6 (lower is better)
Translates to: TQLLTGHGGMQI*VSQMLLAGLCP
Trigger: AGGGCAGAGGCCAGCCAGGAGCATCTGAGAGACCCAAATTTGCATCCCACCATGGCCAGTTAGTAGTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468337.1
CDS CCA 72 bp ATCACCAGAGGTCACACAACTACTAACTGGCCATGGTaGGATGCAAATTTGGGTCTCTCAGATGCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: ITRGHTTTNWPW*DANLGLSDAPG
Trigger: GCCAGGAGCATCTGAGAGACCCAAATTTGCATCCCACCATGGCCAGTTAGTAGTTGTGTGACCTCTGGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468337.1
CDS TCA 72 bp CCTCACAGGTCATTTGATCTTGAGGTCCTTCAAGGCTaGCTCCAAGCTCTTCACATCCCAGATACTCATGCC +
Preference number: 6 (lower is better)
Translates to: PHRSFDLEVLQG*LQALHIPDTHA
Trigger: GGCATGAGTATCTGGGATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427217.6
ENST00000431816.6
ENST00000443222.6
ENST00000451682.5
ENST00000455009.6
ENST00000458033.6
ENST00000481997.5
ENST00000645391.1
ENST00000646101.2
CDS CCA 72 bp TTCAAAGTCACTCGGCTTCTACTAAATGACGCAGCTTaGGACTCTGACCCCAAATCTTGGAGGCCAGGAAGT +
Preference number: 6 (lower is better)
Translates to: FKVTRLLLNDAA*DSDPKSWRPGS
Trigger: ACTTCCTGGCCTCCAAGATTTGGGGTCAGAGTCCCAAGCTGCGTCATTTAGTAGAAGCCGAGTGACTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417330.6
ENST00000418347.6
ENST00000451682.5
CDS CCA 72 bp AGTGATGCCATCACCAGAGGTCACACAACTACTAACTaGCCATGGTGGGATGCAAATTTGGGTCTCTCAGAT +
Preference number: 6 (lower is better)
Translates to: SDAITRGHTTTN*PWWDANLGLSD
Trigger: ATCTGAGAGACCCAAATTTGCATCCCACCATGGCCAGTTAGTAGTTGTGTGACCTCTGGTGATGGCATCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468337.1
CDS CAA 90 bp TCAGTTTGTACAGGAGGAAACCCAGGCTCAGACAAAAGCAACGATTaGTTCAAAGTCACTCGGCTTCTACTAAATGACGCAGCTTGGGAC +
Preference number: 6 (lower is better)
Translates to: SVCTGGNPGSDKSND*FKVTRLLLNDAAWD
Trigger: GTCCCAAGCTGCGTCATTTAGTAGAAGCCGAGTGACTTTGAACAAATCGTTGCTTTTGTCTGAGCCTGGGTTTCCTCCTGTACAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417330.6
ENST00000418347.6
ENST00000451682.5
CDS CAA 72 bp ACAGGAGGAAACCCAGGCTCAGACAAAAGCAACGATTaGTTCAAAGTCACTCGGCTTCTACTAAATGACGCA +
Preference number: 6 (lower is better)
Translates to: TGGNPGSDKSND*FKVTRLLLNDA
Trigger: TGCGTCATTTAGTAGAAGCCGAGTGACTTTGAACAAATCGTTGCTTTTGTCTGAGCCTGGGTTTCCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417330.6
ENST00000418347.6
ENST00000451682.5