RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARNTL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000029153

Ensembl transcript IDs: ENST00000261178.9, ENST00000266503.9, ENST00000311001.9, ENST00000395901.6, ENST00000457040.6, ENST00000539558.1, ENST00000542388.1, ENST00000544915.5, ENST00000546179.5

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTAGAAACTCTGCCTCTCAAATCCTGGCATCACGAGGGCAAGTCTaGCCCCATCTGCTTTTGAGGCCATCCAGCTATGATGGCCTACCC +
Preference number: 1 (lower is better)
Translates to: SRNSASQILASRGQV*PHLLLRPSSYDGLP
Trigger: GGGTAGGCCATCATAGCTGGATGGCCTCAAAAGCAGATGGGGGCAGACTTGCCCTCGTGATGCCAGGATTTGAGAGGCAGAGTTTCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR GCA 90 bp AGGTCCTCAAGTGTCGGACCAGGAATGGTGCCAACCCTCCAACATTaGTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACATCC +
Preference number: 1 (lower is better)
Translates to: RSSSVGPGMVPTLQH*WDTISSRGQCANTS
Trigger: GGATGTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTTGGCACCATTCCTGGTCCGACACTTGAGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR TCA 90 bp CCCACATTGAAGTCTGAGGGCTGCCCCATGAGTTCCCAGCCTATCTaGCTTTCATTTGCGAGGCACGAGAGAGAAAATATGGGAGCATAC +
Preference number: 1 (lower is better)
Translates to: PTLKSEGCPMSSQPI*LSFARHERENMGAY
Trigger: GTATGCTCCCATATTTTCTCTCTCGTGCCTCGCAAATGAAAGTCAGATAGGCTGGGAACTCATGGGGCAGCCCTCAGACTTCAATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CCA 90 bp TCCTCAAGTGTCGGACCAGGAATGGTGCCAACCCTCCAACATTGCTaGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACATCCTTG +
Preference number: 1 (lower is better)
Translates to: SSSVGPGMVPTLQHC*DTISSRGQCANTSL
Trigger: CAAGGATGTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTTGGCACCATTCCTGGTCCGACACTTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR GCA 90 bp AACCCTCCAACATTGCTGGGACACTATCAGTTCAAGAGGACAGTGTaGCAATACATCCTTGCCCACGAAGCCCCTGCACATTTCACACTT +
Preference number: 1 (lower is better)
Translates to: NPPTLLGHYQFKRTV*QYILAHEAPAHFTL
Trigger: AAGTGTGAAATGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR TCA 90 bp CACCATATAGAACAGGAAACTGGATTTGAAGCCCACATTGAAGTCTaGGGGCTGCCCCATGAGTTCCCAGCCTATCTGACTTTCATTTGC +
Preference number: 1 (lower is better)
Translates to: HHIEQETGFEAHIEV*GLPHEFPAYLTFIC
Trigger: GCAAATGAAAGTCAGATAGGCTGGGAACTCATGGGGCAGCCCTCAGACTTCAATGTGGGCTTCAAATCCAGTTTCCTGTTCTATATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CCA 90 bp CTTAGGCTGCTGCACACCAATTCTCCCCATCTTGTAGGATTTCTTTaGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAAGTGTCGGA +
Preference number: 1 (lower is better)
Translates to: LRLLHTNSPHLVGFL*LILNLMSLRSSSVG
Trigger: TCCGACACTTGAGGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGGAGAATTGGTGTGCAGCAGCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR TCA 90 bp TGCGAGGCACGAGAGAGAAAATATGGGAGCATACTTGGCAAGCTATaGAGAGCTACTGAAGCAGAAAGTGTTATAAAGTATGATCCCCGA +
Preference number: 1 (lower is better)
Translates to: CEARERKYGSILGKL*RATEAESVIKYDPR
Trigger: TCGGGGATCATACTTTATAACACTTTCTGCTTCAGTAGCTCTTCATAGCTTGCCAAGTATGCTCCCATATTTTCTCTCTCGTGCCTCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR GCA 90 bp ACTAATAAAGGATCAAACCATGCACAGAGTATTCAACTGGCTATCTaGCCACTGGTCTATGGAATTGAACAGCCCCTCCTCTTGCAAAGA +
Preference number: 1 (lower is better)
Translates to: TNKGSNHAQSIQLAI*PLVYGIEQPLLLQR
Trigger: TCTTTGCAAGAGGAGGGGCTGTTCAATTCCATAGACCAGTGGGCAGATAGCCAGTTGAATACTCTGTGCATGGTTTGATCCTTTATTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CCA 90 bp GATCTGAAACTGGACACTACTAAACATGGTCTGGGAACTAAATATTaGCTATTTCTTGTACCTGTGCCCCAGATTTTACGGAGATCCCTC +
Preference number: 1 (lower is better)
Translates to: DLKLDTTKHGLGTKY*LFLVPVPQILRRSL
Trigger: GAGGGATCTCCGTAAAATCTGGGGCACAGGTACAAGAAATAGCCAATATTTAGTTCCCAGACCATGTTTAGTAGTGTCCAGTTTCAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CCA 90 bp TCTAAGCCAAAGTTCTTATGTGTCAGGATCTTCCTAGACCTCCCTTaGAAAGCATTTCTCATAAAACAACTCACACCAGACAGGCTGACT +
Preference number: 1 (lower is better)
Translates to: SKPKFLCVRIFLDLP*KAFLIKQLTPDRLT
Trigger: AGTCAGCCTGTCTGGTGTGAGTTGTTTTATGAGAAATGCTTTCCAAGGGAGGTCTAGGAAGATCCTGACACATAAGAACTTTGGCTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR GCA 90 bp CTTGCCCACGAAGCCCCTGCACATTTCACACTTGAAGGAAACATTTaGTTTTGGTTATTGTCTGTTGGTATGTTTGTCATTAACATGTCT +
Preference number: 1 (lower is better)
Translates to: LAHEAPAHFTLEGNI*FWLLSVGMFVINMS
Trigger: AGACATGTTAATGACAAACATACCAACAGACAATAACCAAAAGCAAATGTTTCCTTCAAGTGTGAAATGTGCAGGGGCTTCGTGGGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 90 bp TCTCAAATCCTGGCATCACGAGGGCAAGTCTGCCCCCATCTGCTTTaGAGGCCATCCAGCTATGATGGCCTACCCTGCCACCCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: SQILASRGQVCPHLL*RPSSYDGLPCHPWL
Trigger: AAGCCAGGGGTGGCAGGGTAGGCCATCATAGCTGGATGGCCTCAAAAGCAGATGGGGGCAGACTTGCCCTCGTGATGCCAGGATTTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 90 bp CAGGTCCTCAAGTGTCGGACCAGGAATGGTGCCAACCCTCCAACATaGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACATC +
Preference number: 2 (lower is better)
Translates to: QVLKCRTRNGANPPT*LGHYQFKRTVCQYI
Trigger: GATGTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTTGGCACCATTCCTGGTCCGACACTTGAGGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR TCA 90 bp CCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCCTGAGGGCTGCCCCATaGGTTCCCAGCCTATCTGAC +
Preference number: 2 (lower is better)
Translates to: PHLVGFLWLILNLMSLRSLRAAP*VPSLSD
Trigger: GTCAGATAGGCTGGGAACTCATGGGGCAGCCCTCAG...GGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR TCA 90 bp TTACGGAGATCCCTCAAAGACTATGACAACAAAGACATCCTTTTCTGTCGTGACAGGCAGAGATGGCAGTaGGCCAAGATCGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: LRRSLKDYDNKDILFCRDRQRWQ*AKIAPL
Trigger: CAGTGGCGCGATCTTGGCTCACTGCCATCTCTGCCT...GTCACGACAGAAAAGGATGTCTTTGTTGTCATAGTCTTTGAGGGATCTCCGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR TCA 90 bp TCAGTTCAAGAGGACAGTGTGCCAATACATCCTTGCCCACGAAGCCCCTGCACAATACTTGGCAAGCTATaGAGAGCTACTGAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: SVQEDSVPIHPCPRSPCTILGKL*RATEAE
Trigger: TTCTGCTTCAGTAGCTCTTCATAGCTTGCCAAGTAT...TGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR GCA 90 bp CTTGTACCTGTGCCCCAGATTTTACGGAGATCCCTCAAAGACTATGACAACAAAGTGCCAATACATCCTTaGCCACGAAGCCCCTGCACA +
Preference number: 2 (lower is better)
Translates to: LVPVPQILRRSLKDYDNKVPIHP*PRSPCT
Trigger: TGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCAC...TTTGTTGTCATAGTCTTTGAGGGATCTCCGTAAAATCTGGGGCACAGGTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 90 bp TGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACATCCTaGCCCACGAAGCCCCTGCACATTTCACACTTGAAGGAAACATTT +
Preference number: 2 (lower is better)
Translates to: CWDTISSRGQCANTS*PTKPLHISHLKETF
Trigger: AAATGTTTCCTTCAAGTGTGAAATGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR TCA 90 bp CTTGTACCTGTGCCCCAGATTTTACGGAGATCCCTCAAAGACTATGACAACAAACTCAACAGGGTCTTCTaGTTCCAGGCACTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LVPVPQILRRSLKDYDNKLNRVF*FQALFP
Trigger: TGGGAAGAGTGCCTGGAATCAGAAGACCCTGTTGAG...TTTGTTGTCATAGTCTTTGAGGGATCTCCGTAAAATCTGGGGCACAGGTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR CCA 90 bp TCCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCGTGTCGGACCAGGAATaGTGCCAACCCTCCAACATT +
Preference number: 2 (lower is better)
Translates to: SPSCRISLAHSKPDVSQVVSDQE*CQPSNI
Trigger: AATGTTGGAGGGTTGGCACCATTCCTGGTCCGACAC...GACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR GCA 90 bp CCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCCCAACCCTCCAACATTaGTGGGACACTATCAGTTCA +
Preference number: 2 (lower is better)
Translates to: PHLVGFLWLILNLMSLRSPTLQH*WDTISS
Trigger: TGAACTGATAGTGTCCCAGCAATGTTGGAGGGTTGG...GGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 90 bp AGCATGTTCCGTGCTGGGCAGGTTTTCTTTCCAGGTCAGTTTTTATaGGCACTACACCTGGAAAGCTCTCTAAGCCAAAGTTCTTATGTG +
Preference number: 2 (lower is better)
Translates to: SMFRAGQVFFPGQFL*ALHLESSLSQSSYV
Trigger: CACATAAGAACTTTGGCTTAGAGAGCTTTCCAGGTGTAGTGCCAATAAAAACTGACCTGGAAAGAAAACCTGCCCAGCACGGAACATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR GCA 90 bp TTACGGAGATCCCTCAAAGACTATGACAACAAAGACATCCTTTTCTGTCGTGACTTCAAGAGGACAGTGTaGCAATACATCCTTGCCCAC +
Preference number: 2 (lower is better)
Translates to: LRRSLKDYDNKDILFCRDFKRTV*QYILAH
Trigger: GTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAA...GTCACGACAGAAAAGGATGTCTTTGTTGTCATAGTCTTTGAGGGATCTCCGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR CCA 90 bp CTCATGAATGGACTGTCATTATCGTGGGAGTTGGTTAGTTACCTCAAGAGTGAGGTGAGCCACCACGTCTaGCCTATTAAGAGTAAATCT +
Preference number: 2 (lower is better)
Translates to: LMNGLSLSWELVSYLKSEVSHHV*PIKSKS
Trigger: AGATTTACTCTTAATAGGCCAGACGTGGTGGCTCAC...CTCACTCTTGAGGTAACTAACCAACTCCCACGATAATGACAGTCCATTCATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR CCA 90 bp TCCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCAATAATGCTTTGTTTTaGCGAGGGGCTCTGAGGGAA +
Preference number: 2 (lower is better)
Translates to: SPSCRISLAHSKPDVSQVNNALF*RGALRE
Trigger: TTCCCTCAGAGCCCCTCGCCAAAACAAAGCATTATT...GACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR GCA 90 bp CTTGTACCTGTGCCCCAGATTTTACGGAGATCCCTCAAAGACTATGACAACAAAATTCAACTGGCTATCTaGCCACTGGTCTATGGAATT +
Preference number: 2 (lower is better)
Translates to: LVPVPQILRRSLKDYDNKIQLAI*PLVYGI
Trigger: AATTCCATAGACCAGTGGGCAGATAGCCAGTTGAAT...TTTGTTGTCATAGTCTTTGAGGGATCTCCGTAAAATCTGGGGCACAGGTACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR CCA 90 bp CATTTTGAAGGAAACACAAACCTTAGGAGAGCTACGGTATCATACAATGCATGGTGGCTATCTGCCCACTaGTCTATGGAATTGAACAGC +
Preference number: 2 (lower is better)
Translates to: HFEGNTNLRRATVSYNAWWLSAH*SMELNS
Trigger: GCTGTTCAATTCCATAGACCAGTGGGCAGATAGCCA...CCATGCATTGTATGATACCGTAGCTCTCCTAAGGTTTGTGTTTCCTTCAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 90 bp TGGACACTACTAAACATGGTCTGGGAACTAAATATTGGCTATTTCTaGTACCTGTGCCCCAGATTTTACGGAGATCCCTCAAAGACTATG +
Preference number: 2 (lower is better)
Translates to: WTLLNMVWELNIGYF*YLCPRFYGDPSKTM
Trigger: CATAGTCTTTGAGGGATCTCCGTAAAATCTGGGGCACAGGTACAAGAAATAGCCAATATTTAGTTCCCAGACCATGTTTAGTAGTGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR GCA 90 bp TCCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCTATCTGACTTTCATTTaGGAGGCACGAGAGAGAAAA +
Preference number: 2 (lower is better)
Translates to: SPSCRISLAHSKPDVSQVYLTFI*EARERK
Trigger: TTTTCTCTCTCGTGCCTCGCAAATGAAAGTCAGATA...GACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR GCA 90 bp GTGACATACACCATACACTCTCAAGTGAGTTCAGAAAGCATGTTCCGTGCTGGGGCTAAAGAAATAGCATaGAGGGTCAAAATAATGCTT +
Preference number: 2 (lower is better)
Translates to: VTYTIHSQVSSESMFRAGAKEIA*RVKIML
Trigger: AAGCATTATTTTGACCCTGCATGCTATTTCTTTAGC...CCCAGCACGGAACATGCTTTCTGAACTCACTTGAGAGTGTATGGTGTATGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR CCA 90 bp CATTTTGAAGGAAACACAAACCTTAGGAGAGCTACGGTATCATACAATGCATGGATATGGGAGCATACTTaGCAAGCTATGAAGAGCTAC +
Preference number: 2 (lower is better)
Translates to: HFEGNTNLRRATVSYNAWIWEHT*QAMKSY
Trigger: GTAGCTCTTCATAGCTTGCCAAGTATGCTCCCATAT...CCATGCATTGTATGATACCGTAGCTCTCCTAAGGTTTGTGTTTCCTTCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR TCA 90 bp TTACGGAGATCCCTCAAAGACTATGACAACAAAGACATCCTTTTCTGTCGTGACTTCTGTAAGGAAAGCTaGAACTCTTTTGACTTTCTG +
Preference number: 2 (lower is better)
Translates to: LRRSLKDYDNKDILFCRDFCKES*NSFDFL
Trigger: CAGAAAGTCAAAAGAGTTTCAGCTTTCCTTACAGAA...GTCACGACAGAAAAGGATGTCTTTGTTGTCATAGTCTTTGAGGGATCTCCGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR CCA 90 bp CATTTTGAAGGAAACACAAACCTTAGGAGAGCTACGGTATCATACAATGCATGGCTTGTAGGATTTCTTTaGCTCATTCTAAACCTGATG +
Preference number: 2 (lower is better)
Translates to: HFEGNTNLRRATVSYNAWLVGFL*LILNLM
Trigger: CATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAG...CCATGCATTGTATGATACCGTAGCTCTCCTAAGGTTTGTGTTTCCTTCAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR TCA 72 bp TGGCATCACGAGGGCAAGTCTGCCCCCATCTGCTTTTaGGGCCATCCAGCTATGATGGCCTACCCTGCCACC +
Preference number: 3 (lower is better)
Translates to: WHHEGKSAPICF*GHPAMMAYPAT
Trigger: GGTGGCAGGGTAGGCCATCATAGCTGGATGGCCTCAAAAGCAGATGGGGGCAGACTTGCCCTCGTGATGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CCA 72 bp GGCCTACCCTGCCACCCCTGGCTTAGGCAGACTCTTTaGAAGCCAAGTCTAACCTGCAATGGTTCAGTCCCC +
Preference number: 3 (lower is better)
Translates to: GLPCHPWLRQTL*KPSLTCNGSVP
Trigger: GGGGACTGAACCATTGCAGGTTAGACTTGGCTTCCAAAGAGTCTGCCTAAGCCAGGGGTGGCAGGGTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR GCA 72 bp AGTGTCGGACCAGGAATGGTGCCAACCCTCCAACATTaGTGGGACACTATCAGTTCAAGAGGACAGTGTGCC +
Preference number: 3 (lower is better)
Translates to: SVGPGMVPTLQH*WDTISSRGQCA
Trigger: GGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTTGGCACCATTCCTGGTCCGACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR GCA 72 bp TCTGCCTCTCAAATCCTGGCATCACGAGGGCAAGTCTaGCCCCATCTGCTTTTGAGGCCATCCAGCTATGAT +
Preference number: 3 (lower is better)
Translates to: SASQILASRGQV*PHLLLRPSSYD
Trigger: ATCATAGCTGGATGGCCTCAAAAGCAGATGGGGGCAGACTTGCCCTCGTGATGCCAGGATTTGAGAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR GCA 72 bp TGTCTCTCAGGTCCTCAAGTGTCGGACCAGGAATGGTaGCAACCCTCCAACATTGCTGGGACACTATCAGTT +
Preference number: 3 (lower is better)
Translates to: CLSGPQVSDQEW*QPSNIAGTLSV
Trigger: AACTGATAGTGTCCCAGCAATGTTGGAGGGTTGGCACCATTCCTGGTCCGACACTTGAGGACCTGAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CCA 72 bp GTCGGACCAGGAATGGTGCCAACCCTCCAACATTGCTaGGACACTATCAGTTCAAGAGGACAGTGTGCCAAT +
Preference number: 3 (lower is better)
Translates to: VGPGMVPTLQHC*DTISSRGQCAN
Trigger: ATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTTGGCACCATTCCTGGTCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR CAA 90 bp GTGACATACACCATACACTCTCAAGTGAGTTCAGAAAGCATGTTCCGTGCTGGGTGTGCCAATACATCCTaGCCCACGAAGCCCCTGCAC +
Preference number: 3 (lower is better)
Translates to: VTYTIHSQVSSESMFRAGCANTS*PTKPLH
Trigger: GTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACA...CCCAGCACGGAACATGCTTTCTGAACTCACTTGAGAGTGTATGGTGTATGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR GCA 72 bp GGATCAAACCATGCACAGAGTATTCAACTGGCTATCTaGCCACTGGTCTATGGAATTGAACAGCCCCTCCTC +
Preference number: 3 (lower is better)
Translates to: GSNHAQSIQLAI*PLVYGIEQPLL
Trigger: GAGGAGGGGCTGTTCAATTCCATAGACCAGTGGGCAGATAGCCAGTTGAATACTCTGTGCATGGTTTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CCA 72 bp GAGGCCTTTGCGCTCATGAATGGACTGTCATTATCGTaGGAGTTGGTTAGTTACCTCAAGAGTGAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: EAFALMNGLSLS*ELVSYLKSECL
Trigger: CAGGCACTCACTCTTGAGGTAACTAACCAACTCCCACGATAATGACAGTCCATTCATGAGCGCAAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR CAA 90 bp AACCCTCCAACATTGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACATCCCAGCTCTGTGCTaGCCTAAGTCTCCAAAGATC +
Preference number: 3 (lower is better)
Translates to: NPPTLLGHYQFKRTVCQYIPALC*PKSPKI
Trigger: GATCTTTGGAGACTTAGGCAAGCACAGAGCTGGGAT...GTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR CAA 90 bp TCAGTTCAAGAGGACAGTGTGCCAATACATCCTTGCCCACGAAGCCCCTGCACATCATTATCGTGGGAGTaGGTTAGTTACCTCAAGAGT +
Preference number: 3 (lower is better)
Translates to: SVQEDSVPIHPCPRSPCTSLSWE*VSYLKS
Trigger: ACTCTTGAGGTAACTAACCAACTCCCACGATAATGA...TGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR GCA 72 bp CTGCCCCATGAGTTCCCAGCCTATCTGACTTTCATTTaGGAGGCACGAGAGAGAAAATATGGGAGCATACTT +
Preference number: 3 (lower is better)
Translates to: LPHEFPAYLTFI*EARERKYGSIL
Trigger: AAGTATGCTCCCATATTTTCTCTCTCGTGCCTCGCAAATGAAAGTCAGATAGGCTGGGAACTCATGGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CCA 72 bp ACCATGCACAGAGTATTCAACTGGCTATCTGCCCACTaGTCTATGGAATTGAACAGCCCCTCCTCTTGCAAA +
Preference number: 3 (lower is better)
Translates to: TMHRVFNWLSAH*SMELNSPSSCK
Trigger: TTTGCAAGAGGAGGGGCTGTTCAATTCCATAGACCAGTGGGCAGATAGCCAGTTGAATACTCTGTGCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR TCA 72 bp GGTCATACAGCTAAATTCAGCCTCAACAGGGTCTTCTaGTTCCAGGCACTCTTCCCACTCCACTACATTACT +
Preference number: 3 (lower is better)
Translates to: GHTAKFSLNRVF*FQALFPLHYIT
Trigger: AGTAATGTAGTGGAGTGGGAAGAGTGCCTGGAATCAGAAGACCCTGTTGAGGCTGAATTTAGCTGTATGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR CAA 90 bp CCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCCTATCTGACTTTCATTaGCGAGGCACGAGAGAGAAA +
Preference number: 3 (lower is better)
Translates to: PHLVGFLWLILNLMSLRSLSDFH*RGTREK
Trigger: TTTCTCTCTCGTGCCTCGCAAATGAAAGTCAGATAG...GGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR CAA 90 bp AACCCTCCAACATTGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACTGTCTGTTGGTATGTTaGTCATTAACATGTCTGACA +
Preference number: 3 (lower is better)
Translates to: NPPTLLGHYQFKRTVCQYCLLVC*SLTCLT
Trigger: TGTCAGACATGTTAATGACAAACATACCAACAGACA...GTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR GCA 72 bp CATACACTCTCAAGTGAGTTCAGAAAGCATGTTCCGTaGTGGGCAGGTTTTCTTTCCAGGTCAGTTTTTATT +
Preference number: 3 (lower is better)
Translates to: HTLSSEFRKHVP*WAGFLSRSVFI
Trigger: AATAAAAACTGACCTGGAAAGAAAACCTGCCCAGCACGGAACATGCTTTCTGAACTCACTTGAGAGTGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR-3UTR CAA 90 bp TTACGGAGATCCCTCAAAGACTATGACAACAAAGACATCCTTTTCTGTCGTGACAATATGGGAGCATACTaGGCAAGCTATGAAGAGCTA +
Preference number: 3 (lower is better)
Translates to: LRRSLKDYDNKDILFCRDNMGAY*ASYEEL
Trigger: TAGCTCTTCATAGCTTGCCAAGTATGCTCCCATATT...GTCACGACAGAAAAGGATGTCTTTGTTGTCATAGTCTTTGAGGGATCTCCGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CCA 72 bp AAGTTCTTATGTGTCAGGATCTTCCTAGACCTCCCTTaGAAAGCATTTCTCATAAAACAACTCACACCAGAC +
Preference number: 3 (lower is better)
Translates to: KFLCVRIFLDLP*KAFLIKQLTPD
Trigger: GTCTGGTGTGAGTTGTTTTATGAGAAATGCTTTCCAAGGGAGGTCTAGGAAGATCCTGACACATAAGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR TCA 72 bp CGAGAGAGAAAATATGGGAGCATACTTGGCAAGCTATaGAGAGCTACTGAAGCAGAAAGTGTTATAAAGTAT +
Preference number: 3 (lower is better)
Translates to: RERKYGSILGKL*RATEAESVIKY
Trigger: ATACTTTATAACACTTTCTGCTTCAGTAGCTCTTCATAGCTTGCCAAGTATGCTCCCATATTTTCTCTCTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR GCA 72 bp GAAGCCCCTGCACATTTCACACTTGAAGGAAACATTTaGTTTTGGTTATTGTCTGTTGGTATGTTTGTCATT +
Preference number: 3 (lower is better)
Translates to: EAPAHFTLEGNI*FWLLSVGMFVI
Trigger: AATGACAAACATACCAACAGACAATAACCAAAAGCAAATGTTTCCTTCAAGTGTGAAATGTGCAGGGGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp CAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCCCCAGGCGGCGGCTCTaGAGCAGGGAAGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: QRLEGPLDVTEVPRVSQAPRRRL*SREAGT
Trigger: AGTCCCCGCTTCCCTGCTCCAGAGCCGCCGCCTGGG...GGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR GCA 90 bp AGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCCCCTACGCGCCATGGGGTTaGACTGAGGGATCATTGCAG +
Preference number: 4 (lower is better)
Translates to: RLEGPLDVTEVPRVSQAPYAPWG*TEGSLQ
Trigger: CTGCAATGATCCCTCAGTGCAACCCCATGGCGCGTA...GGGGGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp AGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCCCCCCAGTTTACGCGCCATaGGGTTGCACTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: RLEGPLDVTEVPRVSQAPPVYAP*GCTEGS
Trigger: TGATCCCTCAGTGCAACCCCATGGCGCGTAAACTGG...GGGGGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp CAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCTCTCAACACTTTACCTaGGGCCGTCGCCTCGCCACC +
Preference number: 4 (lower is better)
Translates to: QRLEGPLDVTEVPRVSQASQHFT*GRRLAT
Trigger: GGTGGCGAGGCGACGGCCCCAGGTAAAGTGTTGAGA...GGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp AGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCCCCAGACCCCATAGCTGTTaGTCTTGTCCCTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: RLEGPLDVTEVPRVSQAPRPHSC*SCPWTH
Trigger: GTGAGTCCAGGGACAAGACCAACAGCTATGGGGTCT...GGGGGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546179.5
3UTR CAA 72 bp CTGGCATCACGAGGGCAAGTCTGCCCCCATCTGCTTTaGAGGCCATCCAGCTATGATGGCCTACCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LASRGQVCPHLL*RPSSYDGLPCH
Trigger: GTGGCAGGGTAGGCCATCATAGCTGGATGGCCTCAAAAGCAGATGGGGGCAGACTTGCCCTCGTGATGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp CAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCGCCATGGGGTTGCACTaGGGGATCATTGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: QRLEGPLDVTEVPRVSQAAMGLH*GIIADS
Trigger: ACTGTCTGCAATGATCCCTCAGTGCAACCCCATGGC...GGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp GTTAAAAATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCATCGCAGGAGCCACTTaGTCGGCTCCGCAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: VKNQRLEGPLDVTEVPRVIAGAT*SAPQPR
Trigger: GCGGGGCTGCGGAGCCGACCAAGTGGCTCCTGCGAT...GACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATTTTTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR TCA 90 bp AGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCCCCTTTTCAGTTTGGCTATaGGCTTCTTGGGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: RLEGPLDVTEVPRVSQAPFSVWL*ASWDGS
Trigger: AGACCCATCCCAAGAAGCTCATAGCCAAACTGAAAA...GGGGGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR TCA 90 bp CAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCAAACTCTGTCATGTGTaGGCTGAAAGACCCCATAGC +
Preference number: 4 (lower is better)
Translates to: QRLEGPLDVTEVPRVSQAKLCHV*AERPHS
Trigger: GCTATGGGGTCTTTCAGCTCACACATGACAGAGTTT...GGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR TCA 90 bp AGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCCCCGTTCCCAAAAGTTCCTaGGGCAGATATCCTAAAATC +
Preference number: 4 (lower is better)
Translates to: RLEGPLDVTEVPRVSQAPVPKSS*GRYPKI
Trigger: GATTTTAGGATATCTGCCTCAGGAACTTTTGGGAAC...GGGGGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp AATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGTGTTGGTCTTGTCCCTaGACTCACGCGGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: NQRLEGPLDVTEVPRVSQCWSCP*THAAGN
Trigger: GTTTCCAGCCGCGTGAGTCCAGGGACAAGACCAACA...CTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp CTTGTACCTGTGCCCCAGATTTTACGGAGATCCCTCAAAGACTATGACAACAAAGGTGGCGGGCGCCTGTaGTCCCAGCTGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LVPVPQILRRSLKDYDNKGGGRL*SQLLWR
Trigger: CCTCCAGAGCAGCTGGGACCACAGGCGCCCGCCACC...TTTGTTGTCATAGTCTTTGAGGGATCTCCGTAAAATCTGGGGCACAGGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp CAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCGCGTGGAGATTACTGTaGACTTGCAAACCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: QRLEGPLDVTEVPRVSQAAWRLL*TCKPVL
Trigger: CAAAACTGGTTTGCAAGTTCACAGTAATCTCCACGC...GGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR GCA 90 bp TCAGTTCAAGAGGACAGTGTGCCAATACATCCTTGCCCACGAAGCCCCTGCACATACGCGCCATGGGGTTaGACTGAGGGATCATTGCAG +
Preference number: 4 (lower is better)
Translates to: SVQEDSVPIHPCPRSPCTYAPWG*TEGSLQ
Trigger: CTGCAATGATCCCTCAGTGCAACCCCATGGCGCGTA...TGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp TCAGTTCAAGAGGACAGTGTGCCAATACATCCTTGCCCACGAAGCCCCTGCACATTGAAGTCTGAGGGCTaGCCCATGAGTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SVQEDSVPIHPCPRSPCTLKSEG*PMSSQP
Trigger: AGGCTGGGAACTCATGGGGCAGCCCTCAGACTTCAA...TGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGCCCAGGCGGCGGCTCTaGAGCAGGGAAGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLPRRRL*SREAGT
Trigger: AGTCCCCGCTTCCCTGCTCCAGAGCCGCCGCCTGGG...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp CAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCGCACCATCACACTCCTaGAGTTTACAGTATGAGTAT +
Preference number: 4 (lower is better)
Translates to: QRLEGPLDVTEVPRVSQAAPSHS*SLQYEY
Trigger: ATACTCATACTGTAAACTGCAGGAGTGTGATGGTGC...GGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCCTGGACTCACGCGGCTaGAAACCACAGGAGCAATGC +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCLDSRG*KPQEQC
Trigger: GCATTGCTCCTGTGGTTTCCAGCCGCGTGAGTCCAG...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCATCGCAGGAGCCACTTaGTCGGCTCCGCAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPIAGAT*SAPQPR
Trigger: GCGGGGCTGCGGAGCCGACCAAGTGGCTCCTGCGAT...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp TCAGTTCAAGAGGACAGTGTGCCAATACATCCTTGCCCACGAAGCCCCTGCACACTGCCTCTCAAATCCTaGCATCACGAGGGCAAGTCT +
Preference number: 4 (lower is better)
Translates to: SVQEDSVPIHPCPRSPCTLPLKS*HHEGKS
Trigger: AGACTTGCCCTCGTGATGCCAGGATTTGAGAGGCAG...TGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp GTGACATACACCATACACTCTCAAGTGAGTTCAGAAAGCATGTTCCGTGCTGGGGAGGCTGAGGCAGAATaGCGTGAACCCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VTYTIHSQVSSESMFRAGEAEAE*REPRRQ
Trigger: CTGCCTCCTGGGTTCACGCCATTCTGCCTCAGCCTC...CCCAGCACGGAACATGCTTTCTGAACTCACTTGAGAGTGTATGGTGTATGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCGTAATCCCAGCACTTTaGGAGGCCGAAGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCVIPAL*EAEVGG
Trigger: TCCGCCCACTTCGGCCTCCCAAAGTGCTGGGATTAC...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 72 bp AAGTGTCGGACCAGGAATGGTGCCAACCCTCCAACATaGCTGGGACACTATCAGTTCAAGAGGACAGTGTGC +
Preference number: 4 (lower is better)
Translates to: KCRTRNGANPPT*LGHYQFKRTVC
Trigger: GCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTTGGCACCATTCCTGGTCCGACACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCGCCATGGGGTTGCACTaGGGGATCATTGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCAMGLH*GIIADS
Trigger: ACTGTCTGCAATGATCCCTCAGTGCAACCCCATGGC...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR TCA 90 bp ATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAAGTGTCGGACCAGGCAGAGATGGCAGTaGGCCAAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: ISLAHSKPDVSQVLKCRTRQRWQ*AKIAPL
Trigger: CAGTGGCGCGATCTTGGCTCACTGCCATCTCTGCCT...GGTCCGACACTTGAGGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp AATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGAAACCACAGGAGCAATaGACTGGTTCTCCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: NQRLEGPLDVTEVPRVSQKPQEQ*TGSPLS
Trigger: TGAGAGAGGAGAACCAGTGCATTGCTCCTGTGGTTT...CTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR GCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCTACGCGCCATGGGGTTaGACTGAGGGATCATTGCAG +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCYAPWG*TEGSLQ
Trigger: CTGCAATGATCCCTCAGTGCAACCCCATGGCGCGTA...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CCA 90 bp AATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGACAGGAGCAATGCACTaGTTCTCCTCTCTCAACACT +
Preference number: 4 (lower is better)
Translates to: NQRLEGPLDVTEVPRVSQTGAMH*FSSLNT
Trigger: AGTGTTGAGAGAGGAGAACCAGTGCATTGCTCCTGT...CTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCTGTTGGTCTTGTCCCTaGACTCACGCGGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCCWSCP*THAAGN
Trigger: GTTTCCAGCCGCGTGAGTCCAGGGACAAGACCAACA...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCCCAGTTTACGCGCCATaGGGTTGCACTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCPVYAP*GCTEGS
Trigger: TGATCCCTCAGTGCAACCCCATGGCGCGTAAACTGG...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CCA 90 bp AGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCCCCGTTGTTCCTTTACTTTaGCAACATCTTTTGGATGTA +
Preference number: 4 (lower is better)
Translates to: RLEGPLDVTEVPRVSQAPVVPLL*QHLLDV
Trigger: TACATCCAAAAGATGTTGCCAAAGTAAAGGAACAAC...GGGGGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACTACCCTGCCACCCCTaGCTTAGGCAGACTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQLPCHP*LRQTLW
Trigger: CCAAAGAGTCTGCCTAAGCCAGGGGTGGCAGGGTAG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAACTGTGCACCATCACTaGGGAGTGGCTCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQTVHHH*GVAHGC
Trigger: ACAGCCATGAGCCACTCCTCAGTGATGGTGCACAGT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR TCA 90 bp AATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGTTCTTGGGATGGGTCTaGATCACTTCCTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: NQRLEGPLDVTEVPRVSQFLGWV*ITSFAF
Trigger: AAACGCAAAGGAAGTGATTCAGACCCATCCCAAGAA...CTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR TCA 90 bp TTACGGAGATCCCTCAAAGACTATGACAACAAAGACATCCTTTTCTGTCGTGACGAGGCCATCCAGCTATaGTGGCCTACCCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: LRRSLKDYDNKDILFCRDEAIQL*WPTLPP
Trigger: GGGTGGCAGGGTAGGCCATCATAGCTGGATGGCCTC...GTCACGACAGAAAAGGATGTCTTTGTTGTCATAGTCTTTGAGGGATCTCCGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCCACCATCTTCCACTCTaGTGCCACTGGAGGCTGATA +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCHHLPL*CHWRLI
Trigger: TATCAGCCTCCAGTGGCAGCAGAGTGGAAGATGGTG...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266503.9
CDS-3UTR GCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAATACGCGCCATGGGGTTaGACTGAGGGATCATTGCAG +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQYAPWG*TEGSLQ
Trigger: CTGCAATGATCCCTCAGTGCAACCCCATGGCGCGTA...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR GCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCTCGGACCAGGAATGGTaGCAACCCTCCAACATTGCT +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCSDQEW*QPSNIA
Trigger: AGCAATGTTGGAGGGTTGGCACCATTCCTGGTCCGA...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp CCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTATGATGGCCTACCCTaGCACCCCTGGCTTAGGCAG +
Preference number: 4 (lower is better)
Translates to: PHLVGFLWLILNLMSLRSYDGLP*HPWLRQ
Trigger: CTGCCTAAGCCAGGGGTGGCAGGGTAGGCCATCATA...GGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp AACCCTCCAACATTGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACTCACGAGGGCAAGTCTaGCCCCATCTGCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: NPPTLLGHYQFKRTVCQYSRGQV*PHLLLR
Trigger: CCTCAAAAGCAGATGGGGGCAGACTTGCCCTCGTGA...GTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp TCAGTTCAAGAGGACAGTGTGCCAATACATCCTTGCCCACGAAGCCCCTGCACAAGAAAGCATGTTCCGTaGTGGGCAGGTTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SVQEDSVPIHPCPRSPCTRKHVP*WAGFLS
Trigger: GGAAAGAAAACCTGCCCAGCACGGAACATGCTTTCT...TGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAATGTTGGTCTTGTCCCTaGACTCACGCGGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQCWSCP*THAAGN
Trigger: GTTTCCAGCCGCGTGAGTCCAGGGACAAGACCAACA...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACCAGTTTACGCGCCATaGGGTTGCACTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQPVYAP*GCTEGS
Trigger: TGATCCCTCAGTGCAACCCCATGGCGCGTAAACTGG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAACCATCACTGAGGAGTaGCTCATGGCTGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQTITEE*LMAVDS
Trigger: GCTGTCCACAGCCATGAGCCACTCCTCAGTGATGGT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR TCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAGTTCCCAGCCTATCTaGCTTTCATTTGCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCSSQPI*LSFARH
Trigger: GTGCCTCGCAAATGAAAGTCAGATAGGCTGGGAACT...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp TCAGTTCAAGAGGACAGTGTGCCAATACATCCTTGCCCACGAAGCCCCTGCACACCATACACTCTCAAGTaGGTTCAGAAAGCATGTTCC +
Preference number: 4 (lower is better)
Translates to: SVQEDSVPIHPCPRSPCTPYTLK*VQKACS
Trigger: GGAACATGCTTTCTGAACTCACTTGAGAGTGTATGG...TGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp TCAGTTCAAGAGGACAGTGTGCCAATACATCCTTGCCCACGAAGCCCCTGCACAGCACTGAGGGATCATTaGAGACAGTTCTTCAATCAG +
Preference number: 4 (lower is better)
Translates to: SVQEDSVPIHPCPRSPCTALRDH*RQFFNQ
Trigger: CTGATTGAAGAACTGTCTGCAATGATCCCTCAGTGC...TGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp AAAAATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCATCGAAATCCAACTGTaGACCATCACACTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KNQRLEGPLDVTEVPRVSIEIQL*TITLLQ
Trigger: CTGCAGGAGTGTGATGGTGCACAGTTGGATTTCGAT...GGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAAGACCCCATAGCTGTTaGTCTTGTCCCTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQRPHSC*SCPWTH
Trigger: GTGAGTCCAGGGACAAGACCAACAGCTATGGGGTCT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCCCACTCTGCTGCCACTaGAGGCTGATATTTCTATCC +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCPLCCH*RLIFLS
Trigger: GGATAGAAATATCAGCCTCCAGTGGCAGCAGAGTGG...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266503.9
CDS-3UTR CCA 90 bp TTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAAGTGTCGGACCAGGAATGTGTCGGACCAGGAATaGTGCCAACCCTCCAACATT +
Preference number: 4 (lower is better)
Translates to: LAHSKPDVSQVLKCRTRNVSDQE*CQPSNI
Trigger: AATGTTGGAGGGTTGGCACCATTCCTGGTCCGACAC...ATTCCTGGTCCGACACTTGAGGACCTGAGAGACATCAGGTTTAGAATGAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAACTCTGTCATGTGTaGGCTGAAAGACCCCATAGC +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCKLCHV*AERPHS
Trigger: GCTATGGGGTCTTTCAGCTCACACATGACAGAGTTT...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR TCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCCCACTTTTTCTGTCATaGTTCCTGACTGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCPLFLS*FLTGMG
Trigger: ACCCATCCCAGTCAGGAATCATGACAGAAAAAGTGG...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266503.9
CDS-3UTR TCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCTTTTCAGTTTGGCTATaGGCTTCTCTGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCFSVWL*ASLLPL
Trigger: CAGTGGCAGCAGAGAAGCTCATAGCCAAACTGAAAA...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457040.6
CDS-3UTR TCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCCTGATGGGATGGGTCTaGATCACTTCCTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCLMGWV*ITSFAF
Trigger: AAACGCAAAGGAAGTGATTCAGACCCATCCCATCAG...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457040.6
CDS-3UTR TCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCCACTTGGGATGGGTCTaGATCACTTCCTTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCHLGWV*ITSFAF
Trigger: AAACGCAAAGGAAGTGATTCAGACCCATCCCAAGTG...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAACCACAGGAGCAATaGACTGGTTCTCCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCKPQEQ*TGSPLS
Trigger: TGAGAGAGGAGAACCAGTGCATTGCTCCTGTGGTTT...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR GCA 90 bp AAAAATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCGCACTGAGGGATCATTaGAGACAGTTCTTCAATCAG +
Preference number: 4 (lower is better)
Translates to: KNQRLEGPLDVTEVPRVSALRDH*RQFFNQ
Trigger: CTGATTGAAGAACTGTCTGCAATGATCCCTCAGTGC...GGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR GCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAACAGTACTCTGGTTTTaGCTGGTAGCCTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQTVLWF*LVASSS
Trigger: GGAGCTAGAGGCTACCAGGCAAAACCAGAGTACTGT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR GCA 90 bp GTGACATACACCATACACTCTCAAGTGAGTTCAGAAAGCATGTTCCGTGCTGGGACAGTACTCTGGTTTTaGCTGGTAGCCTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: VTYTIHSQVSSESMFRAGTVLWF*LVASSS
Trigger: GGAGCTAGAGGCTACCAGGCAAAACCAGAGTACTGT...CCCAGCACGGAACATGCTTTCTGAACTCACTTGAGAGTGTATGGTGTATGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCACAGCAACAGTACTCTaGTTTTGCCTGGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCTATVL*FCLVAS
Trigger: AGAGGCTACCAGGCAAAACCAGAGTACTGTTGCTGT...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CCA 90 bp ACTGAAGCAGAAAGTGTTATAAAGTATGATCCCCGAGAAGGTAGACATGCAGTATGGTCCCAGCTGCTCTaGAGGCTGAGGCAGAATGGC +
Preference number: 4 (lower is better)
Translates to: TEAESVIKYDPREGRHAVWSQLL*RLRQNG
Trigger: GCCATTCTGCCTCAGCCTCCAGAGCAGCTGGGACCA...TACTGCATGTCTACCTTCTCGGGGATCATACTTTATAACACTTTCTGCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp GTGACATACACCATACACTCTCAAGTGAGTTCAGAAAGCATGTTCCGTGCTGGGGGGGGAGATACCTCTTaGCAGCATGATCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: VTYTIHSQVSSESMFRAGGGDTS*QHDLKL
Trigger: CAGTTTCAGATCATGCTGCCAAGAGGTATCTCCCCC...CCCAGCACGGAACATGCTTTCTGAACTCACTTGAGAGTGTATGGTGTATGTCAC
49% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 72 bp ACTATCAGTTCAAGAGGACAGTGTGCCAATACATCCTaGCCCACGAAGCCCCTGCACATTTCACACTTGAAG +
Preference number: 4 (lower is better)
Translates to: TISSRGQCANTS*PTKPLHISHLK
Trigger: CTTCAAGTGTGAAATGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAAAACTCTGTCATGTGTaGGCTGAAAGACCCCATAGC +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQKLCHV*AERPHS
Trigger: GCTATGGGGTCTTTCAGCTCACACATGACAGAGTTT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR TCA 90 bp GTGACATACACCATACACTCTCAAGTGAGTTCAGAAAGCATGTTCCGTGCTGGGAAACTCTGTCATGTGTaGGCTGAAAGACCCCATAGC +
Preference number: 4 (lower is better)
Translates to: VTYTIHSQVSSESMFRAGKLCHV*AERPHS
Trigger: GCTATGGGGTCTTTCAGCTCACACATGACAGAGTTT...CCCAGCACGGAACATGCTTTCTGAACTCACTTGAGAGTGTATGGTGTATGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCGCGTGGAGATTACTGTaGACTTGCAAACCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCAWRLL*TCKPVL
Trigger: CAAAACTGGTTTGCAAGTTCACAGTAATCTCCACGC...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR TCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCACTGTGCACCATCACTaGGGAGTGGCTCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPTVHHH*GVAHGC
Trigger: ACAGCCATGAGCCACTCCTCAGTGATGGTGCACAGT...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR TCA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGACTGTGCACCATCACTaGGGAGTGGCTCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLTVHHH*GVAHGC
Trigger: ACAGCCATGAGCCACTCCTCAGTGATGGTGCACAGT...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR TCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAATTCCCCACATCCCTGTaGCAGGAAGATGCAAATCTA +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQFPTSL*QEDANL
Trigger: TAGATTTGCATCTTCCTGTCACAGGGATGTGGGGAA...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR TCA 90 bp CCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCACTGGTCTATGGAATTaGACAGCCCCTCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: PHLVGFLWLILNLMSLRSTGLWN*TAPPLA
Trigger: TGCAAGAGGAGGGGCTGTTCAATTCCATAGACCAGT...GGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp GTGACATACACCATACACTCTCAAGTGAGTTCAGAAAGCATGTTCCGTGCTGGGTACCTCTTGGCAGCATaGTCTGAAACTGGACACTAC +
Preference number: 4 (lower is better)
Translates to: VTYTIHSQVSSESMFRAGYLLAA*SETGHY
Trigger: GTAGTGTCCAGTTTCAGATCATGCTGCCAAGAGGTA...CCCAGCACGGAACATGCTTTCTGAACTCACTTGAGAGTGTATGGTGTATGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAATCGAAATCCAACTGTaGACCATCACTGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQIEIQL*TITEEW
Trigger: CCACTCCTCAGTGATGGTGCACAGTTGGATTTCGAT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR GCA 90 bp GTGACATACACCATACACTCTCAAGTGAGTTCAGAAAGCATGTTCCGTGCTGGGATCGAAATCCAACTGTaGACCATCACTGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VTYTIHSQVSSESMFRAGIEIQL*TITEEW
Trigger: CCACTCCTCAGTGATGGTGCACAGTTGGATTTCGAT...CCCAGCACGGAACATGCTTTCTGAACTCACTTGAGAGTGTATGGTGTATGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCTATGAGCTTCTCTGCTaGCACTGGAGGCTGATATTT +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCYELLC*HWRLIF
Trigger: AAATATCAGCCTCCAGTGGCAGCAGAGAAGCTCATA...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457040.6
CDS-3UTR GCA 90 bp CTTGTACCTGTGCCCCAGATTTTACGGAGATCCCTCAAAGACTATGACAACAAAGTGGCTAGTGGCTACTaGACTGGACAGCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: LVPVPQILRRSLKDYDNKVASGY*TGQHSS
Trigger: AGAACTGTGCTGTCCAGTGCAGTAGCCACTAGCCAC...TTTGTTGTCATAGTCTTTGAGGGATCTCCGTAAAATCTGGGGCACAGGTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp CATTTTGAAGGAAACACAAACCTTAGGAGAGCTACGGTATCATACAATGCATGGCTGGACTCACGCGGCTaGAAACCACAGGAGCAATGC +
Preference number: 4 (lower is better)
Translates to: HFEGNTNLRRATVSYNAWLDSRG*KPQEQC
Trigger: GCATTGCTCCTGTGGTTTCCAGCCGCGTGAGTCCAG...CCATGCATTGTATGATACCGTAGCTCTCCTAAGGTTTGTGTTTCCTTCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAACAGCAACAGTACTCTaGTTTTGCCTGGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQTATVL*FCLVAS
Trigger: AGAGGCTACCAGGCAAAACCAGAGTACTGTTGCTGT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACTTCTCTGCTGCCACTaGAGGCTGATATTTCTATCC +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQLLCCH*RLIFLS
Trigger: GGATAGAAATATCAGCCTCCAGTGGCAGCAGAGAAG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457040.6
CDS-3UTR CCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAATAATGCTTTGTTTTaGCGAGGGGCTCTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCNNALF*RGALRE
Trigger: TTCCCTCAGAGCCCCTCGCCAAAACAAAGCATTATT...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp AACCCTCCAACATTGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACTGGCTATCTGCCCACTaGTCTATGGAATTGAACAGC +
Preference number: 4 (lower is better)
Translates to: NPPTLLGHYQFKRTVCQYWLSAH*SMELNS
Trigger: GCTGTTCAATTCCATAGACCAGTGGGCAGATAGCCA...GTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp TCCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAGTAGCCACATGTaGCTAGTGGCTACTGCACTG +
Preference number: 4 (lower is better)
Translates to: SPSCRISLAHSKPDVSQVLSSHM*LVATAL
Trigger: CAGTGCAGTAGCCACTAGCCACATGTGGCTACTGAG...GACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACCCGTAACATTGTGCTaGGCAAGTATGAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQPVTLC*ASMSLQ
Trigger: TTGGAGACTCATACTTGCCCAGCACAATGTTACGGG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAATTTTCAGTTTGGCTATaGGCTTCTCTGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQFSVWL*ASLKAF
Trigger: GAAGGCCTTCAGAGAAGCTCATAGCCAAACTGAAAA...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR TCA 90 bp TCAGTTCAAGAGGACAGTGTGCCAATACATCCTTGCCCACGAAGCCCCTGCACAATCCATGCTCTTCTTTaGCAGAGATTTTACAACTCT +
Preference number: 4 (lower is better)
Translates to: SVQEDSVPIHPCPRSPCTIHALL*QRFYNS
Trigger: AGAGTTGTAAAATCTCTGTCAAAGAAGAGCATGGAT...TGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCGTTCCCAAAAGTTCCTaGGGCAGATATCCTAAAATC +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCVPKSS*GRYPKI
Trigger: GATTTTAGGATATCTGCCTCAGGAACTTTTGGGAAC...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR TCA 90 bp CATTTTGAAGGAAACACAAACCTTAGGAGAGCTACGGTATCATACAATGCATGGGCCCCCATCTGCTTTTaGGGCCATCCAGCTATGATG +
Preference number: 4 (lower is better)
Translates to: HFEGNTNLRRATVSYNAWAPICF*GHPAMM
Trigger: CATCATAGCTGGATGGCCTCAAAAGCAGATGGGGGC...CCATGCATTGTATGATACCGTAGCTCTCCTAAGGTTTGTGTTTCCTTCAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp TTACGGAGATCCCTCAAAGACTATGACAACAAAGACATCCTTTTCTGTCGTGACCTCAACAGGGTCTTCTaGTTCCAGGCACTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LRRSLKDYDNKDILFCRDLNRVF*FQALFP
Trigger: TGGGAAGAGTGCCTGGAATCAGAAGACCCTGTTGAG...GTCACGACAGAAAAGGATGTCTTTGTTGTCATAGTCTTTGAGGGATCTCCGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAGCACTGAGGGATCATTaGAGACAGTTCTTCAATCAG +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQALRDH*RQFFNQ
Trigger: CTGATTGAAGAACTGTCTGCAATGATCCCTCAGTGC...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR GCA 90 bp AATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGAAAAGAGCCATCTTTTaGTCTGAATTTGTAGGAATC +
Preference number: 4 (lower is better)
Translates to: NQRLEGPLDVTEVPRVSQKRAIF*SEFVGI
Trigger: GATTCCTACAAATTCAGAGCAAAAGATGGCTCTTTT...CTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR GCA 90 bp ATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAAGTGTCGGACCCCAACCCTCCAACATTaGTGGGACACTATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ISLAHSKPDVSQVLKCRTPTLQH*WDTISS
Trigger: TGAACTGATAGTGTCCCAGCAATGTTGGAGGGTTGG...GGTCCGACACTTGAGGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp CCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCACAGGAGCAATGCACTaGTTCTCCTCTCTCAACACT +
Preference number: 4 (lower is better)
Translates to: PHLVGFLWLILNLMSLRSTGAMH*FSSLNT
Trigger: AGTGTTGAGAGAGGAGAACCAGTGCATTGCTCCTGT...GGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp TTACGGAGATCCCTCAAAGACTATGACAACAAAGACATCCTTTTCTGTCGTGACAGACCCCATAGCTGTTaGTCTTGTCCCTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: LRRSLKDYDNKDILFCRDRPHSC*SCPWTH
Trigger: GTGAGTCCAGGGACAAGACCAACAGCTATGGGGTCT...GTCACGACAGAAAAGGATGTCTTTGTTGTCATAGTCTTTGAGGGATCTCCGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp CATTTTGAAGGAAACACAAACCTTAGGAGAGCTACGGTATCATACAATGCATGGCCAGTTTACGCGCCATaGGGTTGCACTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: HFEGNTNLRRATVSYNAWPVYAP*GCTEGS
Trigger: TGATCCCTCAGTGCAACCCCATGGCGCGTAAACTGG...CCATGCATTGTATGATACCGTAGCTCTCCTAAGGTTTGTGTTTCCTTCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp TCAGTTCAAGAGGACAGTGTGCCAATACATCCTTGCCCACGAAGCCCCTGCACACTTGCAAACCAGTTTTaGCATCTATTAGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: SVQEDSVPIHPCPRSPCTLANQF*HLLAFL
Trigger: GAGAAAAGCTAATAGATGCCAAAACTGGTTTGCAAG...TGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp AAAAATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCATTCCAACAATATTTaGAGGCCAGCTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: KNQRLEGPLDVTEVPRVSHSNNI*RPASQV
Trigger: TACTTGAGAAGCTGGCCTCCAAATATTGTTGGAATG...GGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp ACTGAAGCAGAAAGTGTTATAAAGTATGATCCCCGAGAAGGTAGACATGCAGTAACCATCACTGAGGAGTaGCTCATGGCTGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: TEAESVIKYDPREGRHAVTITEE*LMAVDS
Trigger: GCTGTCCACAGCCATGAGCCACTCCTCAGTGATGGT...TACTGCATGTCTACCTTCTCGGGGATCATACTTTATAACACTTTCTGCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp GTGACATACACCATACACTCTCAAGTGAGTTCAGAAAGCATGTTCCGTGCTGGGTCACCATCTTCCACTTaGGATGGGTCTGAATCACTT +
Preference number: 4 (lower is better)
Translates to: VTYTIHSQVSSESMFRAGSPSST*DGSESL
Trigger: AAGTGATTCAGACCCATCCCAAGTGGAAGATGGTGA...CCCAGCACGGAACATGCTTTCTGAACTCACTTGAGAGTGTATGGTGTATGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 72 bp CGTGCTGGGCAGGTTTTCTTTCCAGGTCAGTTTTTATaGGCACTACACCTGGAAAGCTCTCTAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RAGQVFFPGQFL*ALHLESSLSQS
Trigger: ACTTTGGCTTAGAGAGCTTTCCAGGTGTAGTGCCAATAAAAACTGACCTGGAAAGAAAACCTGCCCAGCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp ATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAAGTGTCGGACCGCGTGGAGATTACTGTaGACTTGCAAACCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: ISLAHSKPDVSQVLKCRTAWRLL*TCKPVL
Trigger: CAAAACTGGTTTGCAAGTTCACAGTAATCTCCACGC...GGTCCGACACTTGAGGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAGTTCCCAAAAGTTCCTaGGGCAGATATCCTAAAATC +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQVPKSS*GRYPKI
Trigger: GATTTTAGGATATCTGCCTCAGGAACTTTTGGGAAC...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR GCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACTGAATCACTTCCTTTaGGTTTTCGTGGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQLNHFL*VFVETL
Trigger: CAGAGTTTCCACGAAAACGCAAAGGAAGTGATTCAG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR GCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCTTGGGTAAGCATCCATaGTCTTCTTTGACAGAGATT +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCLGKHP*SSLTEI
Trigger: AATCTCTGTCAAAGAAGAGCATGGATGCTTACCCAA...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR GCA 90 bp GTTAAAAATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTTGGGTAAGCATCCATaGTCTTCTTTGACAGAGATT +
Preference number: 4 (lower is better)
Translates to: VKNQRLEGPLDVTEVPRVLGKHP*SSLTEI
Trigger: AATCTCTGTCAAAGAAGAGCATGGATGCTTACCCAA...GACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATTTTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR GCA 90 bp CTTGTACCTGTGCCCCAGATTTTACGGAGATCCCTCAAAGACTATGACAACAAATTCAAGAGGACAGTGTaGCAATACATCCTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LVPVPQILRRSLKDYDNKFKRTV*QYILAH
Trigger: GTGGGCAAGGATGTATTGGCACACTGTCCTCTTGAA...TTTGTTGTCATAGTCTTTGAGGGATCTCCGTAAAATCTGGGGCACAGGTACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCCTGCCCGTAACATTGTaGTGGGCAAGTATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPLPVTL*WASMSL
Trigger: GAGACTCATACTTGCCCAGCACAATGTTACGGGCAG...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp AAAAATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCTTGCAAACCAGTTTTaGCATCTATTAGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: KNQRLEGPLDVTEVPRVSLANQF*HLLAFL
Trigger: GAGAAAAGCTAATAGATGCCAAAACTGGTTTGCAAG...GGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp GTTAAAAATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCCTTTCTTCTTTGAGTTaGGTAAGCATCCATGCTCTT +
Preference number: 4 (lower is better)
Translates to: VKNQRLEGPLDVTEVPRVLSSLS*VSIHAL
Trigger: AAGAGCATGGATGCTTACCCAACTCAAAGAAGAAAG...GACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATTTTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CCA 90 bp AACCCTCCAACATTGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACATATGGGAGCATACTTaGCAAGCTATGAAGAGCTAC +
Preference number: 4 (lower is better)
Translates to: NPPTLLGHYQFKRTVCQYIWEHT*QAMKSY
Trigger: GTAGCTCTTCATAGCTTGCCAAGTATGCTCCCATAT...GTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 72 bp TTTGCGCTCATGAATGGACTGTCATTATCGTGGGAGTaGGTTAGTTACCTCAAGAGTGAGTGCCTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: FALMNGLSLSWE*VSYLKSECLGN
Trigger: ATTACCCAGGCACTCACTCTTGAGGTAACTAACCAACTCCCACGATAATGACAGTCCATTCATGAGCGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 72 bp TTTGCGAGGCACGAGAGAGAAAATATGGGAGCATACTaGGCAAGCTATGAAGAGCTACTGAAGCAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: FARHERENMGAY*ASYEELLKQKV
Trigger: CACTTTCTGCTTCAGTAGCTCTTCATAGCTTGCCAAGTATGCTCCCATATTTTCTCTCTCGTGCCTCGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCTATTTCTATCCTTGTTaGAAGAAGATAGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCYFYPC*KKIGKG
Trigger: CCCCTTACCTATCTTCTTTCAACAAGGATAGAAATA...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000457040.6
CDS-3UTR TCA 90 bp GTTAAAAATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCATCCATGCTCTTCTTTaGCAGAGATTTTACAACTCT +
Preference number: 4 (lower is better)
Translates to: VKNQRLEGPLDVTEVPRVIHALL*QRFYNS
Trigger: AGAGTTGTAAAATCTCTGTCAAAGAAGAGCATGGAT...GACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATTTTTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR TCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTTCCCCACATCCCTGTaGCAGGAAGATGCAAATCTA +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPFPTSL*QEDANL
Trigger: TAGATTTGCATCTTCCTGTCACAGGGATGTGGGGAA...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR TCA 90 bp TCCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCTCACACCAGACAGGCTaGCTTATTGTAGGCACAAAA +
Preference number: 4 (lower is better)
Translates to: SPSCRISLAHSKPDVSQVSHQTG*LIVGTK
Trigger: TTTTGTGCCTACAATAAGTCAGCCTGTCTGGTGTGA...GACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCCATCTTCCACTCTGCTaGCACTGGAGGCTGATATTT +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPHLPLC*HWRLIF
Trigger: AAATATCAGCCTCCAGTGGCAGCAGAGTGGAAGATG...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266503.9
CDS-3UTR GCA 90 bp GTGACATACACCATACACTCTCAAGTGAGTTCAGAAAGCATGTTCCGTGCTGGGTATTTCTTGTACCTGTaGCCCAGATTTTACGGAGAT +
Preference number: 4 (lower is better)
Translates to: VTYTIHSQVSSESMFRAGYFLYL*PRFYGD
Trigger: ATCTCCGTAAAATCTGGGGCACAGGTACAAGAAATA...CCCAGCACGGAACATGCTTTCTGAACTCACTTGAGAGTGTATGGTGTATGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACTTTCTTCTTTGAGTTaGGTAAGCATCCATGCTCTT +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQLSSLS*VSIHAL
Trigger: AAGAGCATGGATGCTTACCCAACTCAAAGAAGAAAG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACATTCCAACAATATTTaGAGGCCAGCTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQHSNNI*RPASQV
Trigger: TACTTGAGAAGCTGGCCTCCAAATATTGTTGGAATG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CCA 90 bp CCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCAACACCCAAGTCCTGTaGATTAGAATCCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: PHLVGFLWLILNLMSLRSNTQVL*IRIPES
Trigger: TGATTCTGGGATTCTAATCCACAGGACTTGGGTGTT...GGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCTTCCTAGACCTCCCTTaGAAAGCATTTCTCATAAAA +
Preference number: 4 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCFLDLP*KAFLIK
Trigger: TTTTATGAGAAATGCTTTCCAAGGGAGGTCTAGGAA...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 72 bp ACATCCTTGCCCACGAAGCCCCTGCACATTTCACACTaGAAGGAAACATTTGCTTTTGGTTATTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: TSLPTKPLHISH*KETFAFGYCLL
Trigger: CAACAGACAATAACCAAAAGCAAATGTTTCCTTCAAGTGTGAAATGTGCAGGGGCTTCGTGGGCAAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTTTTCAGTTTGGCTATaGGCTTCTCTGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPFSVWL*ASLKAF
Trigger: GAAGGCCTTCAGAGAAGCTCATAGCCAAACTGAAAA...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR TCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCGCCATGGGGTTGCACTaGGGGATCATTGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFAMGLH*GIIADS
Trigger: ACTGTCTGCAATGATCCCTCAGTGCAACCCCATGGC...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR TCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCGCGTGGAGATTACTGTaGACTTGCAAACCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPAWRLL*TCKPVL
Trigger: CAAAACTGGTTTGCAAGTTCACAGTAATCTCCACGC...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR TCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAATCCATGCTCTTCTTTaGCAGAGATTTTACAACTCT +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQIHALL*QRFYNS
Trigger: AGAGTTGTAAAATCTCTGTCAAAGAAGAGCATGGAT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR TCA 90 bp ACTGAAGCAGAAAGTGTTATAAAGTATGATCCCCGAGAAGGTAGACATGCAGTATTCCCCACATCCCTGTaGCAGGAAGATGCAAATCTA +
Preference number: 4 (lower is better)
Translates to: TEAESVIKYDPREGRHAVFPTSL*QEDANL
Trigger: TAGATTTGCATCTTCCTGTCACAGGGATGTGGGGAA...TACTGCATGTCTACCTTCTCGGGGATCATACTTTATAACACTTTCTGCTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp TTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAAGTGTCGGACCAGGAATATCCCTCAAAGACTATaGCAACAAAGACATCCTTTT +
Preference number: 4 (lower is better)
Translates to: LAHSKPDVSQVLKCRTRNIPQRL*QQRHPF
Trigger: AAAAGGATGTCTTTGTTGTCATAGTCTTTGAGGGAT...ATTCCTGGTCCGACACTTGAGGACCTGAGAGACATCAGGTTTAGAATGAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGGCACTGAGGGATCATTaGAGACAGTTCTTCAATCAG +
Preference number: 4 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLALRDH*RQFFNQ
Trigger: CTGATTGAAGAACTGTCTGCAATGATCCCTCAGTGC...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR GCA 90 bp ATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAAGTGTCGGACCTTGGGTAAGCATCCATaGTCTTCTTTGACAGAGATT +
Preference number: 4 (lower is better)
Translates to: ISLAHSKPDVSQVLKCRTLGKHP*SSLTEI
Trigger: AATCTCTGTCAAAGAAGAGCATGGATGCTTACCCAA...GGTCCGACACTTGAGGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp CCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTATCTGACTTTCATTTaGGAGGCACGAGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: PHLVGFLWLILNLMSLRSYLTFI*EARERK
Trigger: TTTTCTCTCTCGTGCCTCGCAAATGAAAGTCAGATA...GGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCGTGCCAATACATCCTTaGCCACGAAGCCCCTGCACA +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFVPIHP*PRSPCT
Trigger: TGTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCAC...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACTTGCAAACCAGTTTTaGCATCTATTAGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQLANQF*HLLAFL
Trigger: GAGAAAAGCTAATAGATGCCAAAACTGGTTTGCAAG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCACCATCACTGAGGAGTaGCTCATGGCTGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFTITEE*LMAVDS
Trigger: GCTGTCCACAGCCATGAGCCACTCCTCAGTGATGGT...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CCA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGGTGAGCCACCACGTCTaGCCTATTAAGAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLVSHHV*PIKSKS
Trigger: AGATTTACTCTTAATAGGCCAGACGTGGTGGCTCAC...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 72 bp CTAAACATGGTCTGGGAACTAAATATTGGCTATTTCTaGTACCTGTGCCCCAGATTTTACGGAGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: LNMVWELNIGYF*YLCPRFYGDPS
Trigger: TGAGGGATCTCCGTAAAATCTGGGGCACAGGTACAAGAAATAGCCAATATTTAGTTCCCAGACCATGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCGTTCCCAAAAGTTCCTaGGGCAGATATCCTAAAATC +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPVPKSS*GRYPKI
Trigger: GATTTTAGGATATCTGCCTCAGGAACTTTTGGGAAC...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR GCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCCTGAATCACTTCCTTTaGGTTTTCGTGGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPLNHFL*VFVETL
Trigger: CAGAGTTTCCACGAAAACGCAAAGGAAGTGATTCAG...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR GCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAAAAAGAGCCATCTTTTaGTCTGAATTTGTAGGAATC +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQKRAIF*SEFVGI
Trigger: GATTCCTACAAATTCAGAGCAAAAGATGGCTCTTTT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR GCA 90 bp CATTTTGAAGGAAACACAAACCTTAGGAGAGCTACGGTATCATACAATGCATGGAATATCCCAGCTCTGTaGTTGCCTAAGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: HFEGNTNLRRATVSYNAWNIPAL*LPKSPK
Trigger: CTTTGGAGACTTAGGCAAGCACAGAGCTGGGATATT...CCATGCATTGTATGATACCGTAGCTCTCCTAAGGTTTGTGTTTCCTTCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCATTCAACTGGCTATCTaGCCACTGGTCTATGGAATT +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPIQLAI*PLVYGI
Trigger: AATTCCATAGACCAGTGGGCAGATAGCCAGTTGAAT...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAGTTGTTCCTTTACTTTaGCAACATCTTTTGGATGTA +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQVVPLL*QHLLDV
Trigger: TACATCCAAAAGATGTTGCCAAAGTAAAGGAACAAC...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CCA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGACGAGAGAGAAAATATaGGAGCATACTTGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLTREKI*EHTWQA
Trigger: AGCTTGCCAAGTATGCTCCCATATTTTCTCTCTCGT...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAAGCAGCTTTTCTTTATaGCTTCTAGCTAATCATAGA +
Preference number: 4 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQSSFSL*LLANHR
Trigger: TCTATGATTAGCTAGAAGCCATAAAGAAAAGCTGCT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp TCCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCAGAATATATGAGAAGTaGCATACACCATACACTCTC +
Preference number: 4 (lower is better)
Translates to: SPSCRISLAHSKPDVSQVRIYEK*HTPYTL
Trigger: GAGAGTGTATGGTGTATGTCACTTCTCATATATTCT...GACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTTGGGTAAGCATCCATaGTCTTCTTTGACAGAGATT +
Preference number: 4 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLLGKHP*SSLTEI
Trigger: AATCTCTGTCAAAGAAGAGCATGGATGCTTACCCAA...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR GCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCACAGTACTCTGGTTTTaGCTGGTAGCCTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFTVLWF*LVASSS
Trigger: GGAGCTAGAGGCTACCAGGCAAAACCAGAGTACTGT...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR GCA 90 bp ATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAAGTGTCGGACCGCTAAAGAAATAGCATaGAGGGTCAAAATAATGCTT +
Preference number: 4 (lower is better)
Translates to: ISLAHSKPDVSQVLKCRTAKEIA*RVKIML
Trigger: AAGCATTATTTTGACCCTGCATGCTATTTCTTTAGC...GGTCCGACACTTGAGGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCGCCTTCATTTTAACTTaGTGTTCACCATCTTCCACT +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPAFILT*CSPSST
Trigger: AGTGGAAGATGGTGAACACCAAGTTAAAATGAAGGC...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CCA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGCATTCCAACAATATTTaGAGGCCAGCTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLHSNNI*RPASQV
Trigger: TACTTGAGAAGCTGGCCTCCAAATATTGTTGGAATG...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR TCA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTATTTCTATCCTTGTTaGAAGAAGATAGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLYFYPC*KKIGKG
Trigger: CCCCTTACCTATCTTCTTTCAACAAGGATAGAAATA...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266503.9
CDS-3UTR TCA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGATCCATGCTCTTCTTTaGCAGAGATTTTACAACTCT +
Preference number: 4 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLIHALL*QRFYNS
Trigger: AGAGTTGTAAAATCTCTGTCAAAGAAGAGCATGGAT...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR TCA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTTCTGTAAGGAAAGCTaGAACTCTTTTGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLFCKES*NSFDFL
Trigger: CAGAAAGTCAAAAGAGTTTCAGCTTTCCTTACAGAA...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTTTAAATGGCTTGCATaGGGTCATACAGCTAAATTC +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPFKWLA*GHTAKF
Trigger: GAATTTAGCTGTATGACCTCATGCAAGCCATTTAAA...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCAAACCACAGGAGCAATaGACTGGTTCTCCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFKPQEQ*TGSPLS
Trigger: TGAGAGAGGAGAACCAGTGCATTGCTCCTGTGGTTT...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCACAGGAGCAATGCACTaGTTCTCCTCTCTCAACACT +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFTGAMH*FSSLNT
Trigger: AGTGTTGAGAGAGGAGAACCAGTGCATTGCTCCTGT...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CCA 90 bp CTTGTACCTGTGCCCCAGATTTTACGGAGATCCCTCAAAGACTATGACAACAAAGTTGTTCCTTTACTTTaGCAACATCTTTTGGATGTA +
Preference number: 4 (lower is better)
Translates to: LVPVPQILRRSLKDYDNKVVPLL*QHLLDV
Trigger: TACATCCAAAAGATGTTGCCAAAGTAAAGGAACAAC...TTTGTTGTCATAGTCTTTGAGGGATCTCCGTAAAATCTGGGGCACAGGTACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp ACTGAAGCAGAAAGTGTTATAAAGTATGATCCCCGAGAAGGTAGACATGCAGTACTTTCTTCTTTGAGTTaGGTAAGCATCCATGCTCTT +
Preference number: 4 (lower is better)
Translates to: TEAESVIKYDPREGRHAVLSSLS*VSIHAL
Trigger: AAGAGCATGGATGCTTACCCAACTCAAAGAAGAAAG...TACTGCATGTCTACCTTCTCGGGGATCATACTTTATAACACTTTCTGCTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp CATTTTGAAGGAAACACAAACCTTAGGAGAGCTACGGTATCATACAATGCATGGCATTCCAACAATATTTaGAGGCCAGCTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: HFEGNTNLRRATVSYNAWHSNNI*RPASQV
Trigger: TACTTGAGAAGCTGGCCTCCAAATATTGTTGGAATG...CCATGCATTGTATGATACCGTAGCTCTCCTAAGGTTTGTGTTTCCTTCAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp ACTGAAGCAGAAAGTGTTATAAAGTATGATCCCCGAGAAGGTAGACATGCAGTAAAGTCTAACCTGCAATaGTTCAGTCCCCTAAAAAGT +
Preference number: 4 (lower is better)
Translates to: TEAESVIKYDPREGRHAVKSNLQ*FSPLKS
Trigger: ACTTTTTAGGGGACTGAACCATTGCAGGTTAGACTT...TACTGCATGTCTACCTTCTCGGGGATCATACTTTATAACACTTTCTGCTTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544915.5
3UTR CAA 72 bp AAAGTTCTTATGTGTCAGGATCTTCCTAGACCTCCCTaGGAAAGCATTTCTCATAAAACAACTCACACCAGA +
Preference number: 4 (lower is better)
Translates to: KVLMCQDLPRPP*ESISHKTTHTR
Trigger: TCTGGTGTGAGTTGTTTTATGAGAAATGCTTTCCAAGGGAGGTCTAGGAAGATCCTGACACATAAGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR TCA 90 bp ACTGAAGCAGAAAGTGTTATAAAGTATGATCCCCGAGAAGGTAGACATGCAGTAGCTATGAAGAGCTACTaGAGCAGAAAGTGTTATAAA +
Preference number: 4 (lower is better)
Translates to: TEAESVIKYDPREGRHAVAMKSY*SRKCYK
Trigger: TTTATAACACTTTCTGCTTCAGTAGCTCTTCATAGC...TACTGCATGTCTACCTTCTCGGGGATCATACTTTATAACACTTTCTGCTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR GCA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGAAAAGAGCCATCTTTTaGTCTGAATTTGTAGGAATC +
Preference number: 4 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLKRAIF*SEFVGI
Trigger: GATTCCTACAAATTCAGAGCAAAAGATGGCTCTTTT...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR GCA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCAAAAGAGCCATCTTTTaGTCTGAATTTGTAGGAATC +
Preference number: 4 (lower is better)
Translates to: ESIINLVLLGGKRISPHPKRAIF*SEFVGI
Trigger: GATTCCTACAAATTCAGAGCAAAAGATGGCTCTTTT...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCGTCATGATTCCTGACTaGGATGGGTCTGAATCACTT +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFVMIPD*DGSESL
Trigger: AAGTGATTCAGACCCATCCCAGTCAGGAATCATGAC...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266503.9
CDS-3UTR TCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCACAGACGAGCACAAGTaGACTGGAAAAGAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFTDEHK*TGKELK
Trigger: TTTTAGCTCTTTTCCAGTTCACTTGTGCTCGTCTGT...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCGCCTTCATTTTAACTTaGTGTTCACCATCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFAFILT*CSPSST
Trigger: AGTGGAAGATGGTGAACACCAAGTTAAAATGAAGGC...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCTTTCTTCTTTGAGTTaGGTAAGCATCCATGCTCTT +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFLSSLS*VSIHAL
Trigger: AAGAGCATGGATGCTTACCCAACTCAAAGAAGAAAG...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCTTGTAGGATTTCTTTaGCTCATTCTAAACCTGATG +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFLVGFL*LILNLM
Trigger: CATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAG...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCGTTGTTCCTTTACTTTaGCAACATCTTTTGGATGTA +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFVVPLL*QHLLDV
Trigger: TACATCCAAAAGATGTTGCCAAAGTAAAGGAACAAC...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CCA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCTACTAAACATGGTCTaGGAACTAAATATTGGCTAT +
Preference number: 4 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFLLNMV*ELNIGY
Trigger: ATAGCCAATATTTAGTTCCCAGACCATGTTTAGTAG...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTAAAAATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCCATCGCAGGAGCCACTaGGTCGGCTCCGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: VKNQRLEGPLDVTEVPRVHRRSH*VGSAAP
Trigger: CGGGGCTGCGGAGCCGACCAAGTGGCTCCTGCGATG...GACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATTTTTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp AGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCCCCTCTGAATCACTTCCTTaGCGTTTTCGTGGAAACTCT +
Preference number: 5 (lower is better)
Translates to: RLEGPLDVTEVPRVSQAPSESLP*RFRGNS
Trigger: AGAGTTTCCACGAAAACGCAAAGGAAGTGATTCAGA...GGGGGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS GCA 90 bp CTGAGGAGTGGCTCATGGCTGTGGACAGCAACAGTACTCTGGTTTTaGCTGGTAGCCTCTAGCTCCCCCATTTCAGAAGGACTTGGTGGA +
Preference number: 5 (lower is better)
Translates to: LRSGSWLWTATVLWF*LVASSSPISEGLGG
Trigger: TCCACCAAGTCCTTCTGAAATGGGGGAGCTAGAGGCTACCAGGCAAAACCAGAGTACTGTTGCTGTCCACAGCCATGAGCCACTCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
CDS-3UTR CAA 90 bp CAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCCCATTCCAACAATATTaGGAGGCCAGCTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: QRLEGPLDVTEVPRVSQAPFQQY*EASFSS
Trigger: ACTTGAGAAGCTGGCCTCCAAATATTGTTGGAATGG...GGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCCATCGCAGGAGCCACTaGGTCGGCTCCGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: ESIINLVLLGGKRISPHPHRRSH*VGSAAP
Trigger: CGGGGCTGCGGAGCCGACCAAGTGGCTCCTGCGATG...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS CCA 90 bp CCATCACTGAGGAGTGGCTCATGGCTGTGGACAGCAACAGTACTCTaGTTTTGCCTGGTAGCCTCTAGCTCCCCCATTTCAGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: PSLRSGSWLWTATVL*FCLVASSSPISEGL
Trigger: AAGTCCTTCTGAAATGGGGGAGCTAGAGGCTACCAGGCAAAACCAGAGTACTGTTGCTGTCCACAGCCATGAGCCACTCCTCAGTGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
CDS-3UTR CAA 90 bp AGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCCCCAATCGCTGTTGCCCTTaGATCTACATAGACAAATTT +
Preference number: 5 (lower is better)
Translates to: RLEGPLDVTEVPRVSQAPNRCCP*IYIDKF
Trigger: AAATTTGTCTATGTAGATCAAAGGGCAACAGCGATT...GGGGGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp CAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCCATCCATGCTCTTCTTaGACAGAGATTTTACAACTC +
Preference number: 5 (lower is better)
Translates to: QRLEGPLDVTEVPRVSQAHPCSS*TEILQL
Trigger: GAGTTGTAAAATCTCTGTCAAAGAAGAGCATGGATG...GGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp CAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCAGAACTGCTTTGTGCTaGTCAGTCAAATTATTGTGG +
Preference number: 5 (lower is better)
Translates to: QRLEGPLDVTEVPRVSQARTALC*SVKLLW
Trigger: CCACAATAATTTGACTGACAAGCACAAAGCAGTTCT...GGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp CAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCCTCTGTAGAACTGCTTaGTGCTTGTCAGTCAAATTA +
Preference number: 5 (lower is better)
Translates to: QRLEGPLDVTEVPRVSQALCRTA*CLSVKL
Trigger: TAATTTGACTGACAAGCACAAAGCAGTTCTACAGAG...GGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp AACCCTCCAACATTGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACTGTGCCAATACATCCTaGCCCACGAAGCCCCTGCAC +
Preference number: 5 (lower is better)
Translates to: NPPTLLGHYQFKRTVCQYCANTS*PTKPLH
Trigger: GTGCAGGGGCTTCGTGGGCAAGGATGTATTGGCACA...GTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp CAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGCCAGTTGTTCCTTTACTTaGGCAACATCTTTTGGATGT +
Preference number: 5 (lower is better)
Translates to: QRLEGPLDVTEVPRVSQASCSFT*ATSFGC
Trigger: ACATCCAAAAGATGTTGCCAAAGTAAAGGAACAACT...GGCCTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp AATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGATGGCTGTGTCATCATaGTCACATAGGGCATCGAAA +
Preference number: 5 (lower is better)
Translates to: NQRLEGPLDVTEVPRVSQMAVSS*SHRASK
Trigger: TTTCGATGCCCTATGTGACAATGATGACACAGCCAT...CTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp AATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGCTTAAAACTGTAAGTTaGTCCAGTTTACGCGCCATG +
Preference number: 5 (lower is better)
Translates to: NQRLEGPLDVTEVPRVSQLKTVS*SSLRAM
Trigger: CATGGCGCGTAAACTGGACAAACTTACAGTTTTAAG...CTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp AATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGGAGATTACTGTGAACTaGCAAACCAGTTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: NQRLEGPLDVTEVPRVSQEITVN*QTSFGI
Trigger: GATGCCAAAACTGGTTTGCAAGTTCACAGTAATCTC...CTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp AATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGTGTGCTCTTTCTTCTTaGAGTTGGGTAAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: NQRLEGPLDVTEVPRVSQCALSS*SWVSIH
Trigger: ATGGATGCTTACCCAACTCAAAGAAGAAAGAGCACA...CTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACACTGGTCTATGGAATaGAACAGCCCCTCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQHWSME*NSPSSC
Trigger: GCAAGAGGAGGGGCTGTTCAATTCCATAGACCAGTG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCCCTCCGCTTTTCAGTTaGGCTATGAGCTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCPPLFS*AMSFSE
Trigger: TTCAGAGAAGCTCATAGCCAAACTGAAAAGCGGAGG...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp AATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCCAGCTTTCATTAAACCTGTaGGACTCGAATCATCAAGGT +
Preference number: 5 (lower is better)
Translates to: NQRLEGPLDVTEVPRVSQLSLNL*DSNHQG
Trigger: ACCTTGATGATTCGAGTCCAACAGGTTTAATGAAAG...CTGGGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACCTCCGCTTTTCAGTTaGGCTATGAGCTTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQPPLFS*AMSFSA
Trigger: AGCAGAGAAGCTCATAGCCAAACTGAAAAGCGGAGG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457040.6
CDS-3UTR CAA 90 bp CTCATGAATGGACTGTCATTATCGTGGGAGTTGGTTAGTTACCTCAAGAGTGAGGATTTGAAGCCCACATaGAAGTCTGAGGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: LMNGLSLSWELVSYLKSEDLKPT*KSEGCP
Trigger: GGGGCAGCCCTCAGACTTCAATGTGGGCTTCAAATC...CTCACTCTTGAGGTAACTAACCAACTCCCACGATAATGACAGTCCATTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp ATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAAGTGTCGGACCGCCAACCCTCCAACATaGCTGGGACACTATCAGTTC +
Preference number: 5 (lower is better)
Translates to: ISLAHSKPDVSQVLKCRTANPPT*LGHYQF
Trigger: GAACTGATAGTGTCCCAGCAATGTTGGAGGGTTGGC...GGTCCGACACTTGAGGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAATGTCTGCCCGTAACATaGTGCTGGGCAAGTATGAGT +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQCLPVT*CWASMS
Trigger: ACTCATACTTGCCCAGCACAATGTTACGGGCAGACA...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCCCAGGTCAGTTTTTATaGGCACTACACCTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCPGQFL*ALHLES
Trigger: GCTTTCCAGGTGTAGTGCCAATAAAAACTGACCTGG...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCGGCCTTCATTTTAACTaGGTGTTCACCATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCGLHFN*VFTIFH
Trigger: GTGGAAGATGGTGAACACCAAGTTAAAATGAAGGCC...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp AACCCTCCAACATTGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACCCTCCGCTTTTCAGTTaGGCTATGAGCTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: NPPTLLGHYQFKRTVCQYPPLFS*AMSFSE
Trigger: TTCAGAGAAGCTCATAGCCAAACTGAAAAGCGGAGG...GTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp CTTGTACCTGTGCCCCAGATTTTACGGAGATCCCTCAAAGACTATGACAACAAATGCCCCCATCTGCTTTaGAGGCCATCCAGCTATGAT +
Preference number: 5 (lower is better)
Translates to: LVPVPQILRRSLKDYDNKCPHLL*RPSSYD
Trigger: ATCATAGCTGGATGGCCTCAAAAGCAGATGGGGGCA...TTTGTTGTCATAGTCTTTGAGGGATCTCCGTAAAATCTGGGGCACAGGTACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCTCTGAATCACTTCCTTaGCGTTTTCGTGGAAACTCT +
Preference number: 5 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCSESLP*RFRGNS
Trigger: AGAGTTTCCACGAAAACGCAAAGGAAGTGATTCAGA...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCCTTAAAACTGTAAGTTaGTCCAGTTTACGCGCCATG +
Preference number: 5 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCLKTVS*SSLRAM
Trigger: CATGGCGCGTAAACTGGACAAACTTACAGTTTTAAG...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCGAGATTACTGTGAACTaGCAAACCAGTTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCEITVN*QTSFGI
Trigger: GATGCCAAAACTGGTTTGCAAGTTCACAGTAATCTC...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCTCTTTCTTCTTTGAGTaGGGTAAGCATCCATGCTCT +
Preference number: 5 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCSFFFE*GKHPCS
Trigger: AGAGCATGGATGCTTACCCAACTCAAAGAAGAAAGA...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTAAAAATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCTTTCTTCTTTGAGTaGGGTAAGCATCCATGCTCT +
Preference number: 5 (lower is better)
Translates to: VKNQRLEGPLDVTEVPRVSFFFE*GKHPCS
Trigger: AGAGCATGGATGCTTACCCAACTCAAAGAAGAAAGA...GACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATTTTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACCATTCCAACAATATTaGGAGGCCAGCTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQPFQQY*EASFSS
Trigger: ACTTGAGAAGCTGGCCTCCAAATATTGTTGGAATGG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp AAAAATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCATCCTAAAATCGCTGTaGCCCTTTGATCTACATAGA +
Preference number: 5 (lower is better)
Translates to: KNQRLEGPLDVTEVPRVSILKSL*PFDLHR
Trigger: TCTATGTAGATCAAAGGGCAACAGCGATTTTAGGAT...GGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAATGGCTGTGTCATCATaGTCACATAGGGCATCGAAA +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQMAVSS*SHRASK
Trigger: TTTCGATGCCCTATGTGACAATGATGACACAGCCAT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp AACCCTCCAACATTGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACATGGCTGTGTCATCATaGTCACATAGGGCATCGAAA +
Preference number: 5 (lower is better)
Translates to: NPPTLLGHYQFKRTVCQYMAVSS*SHRASK
Trigger: TTTCGATGCCCTATGTGACAATGATGACACAGCCAT...GTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACTTAAAACTGTAAGTTaGTCCAGTTTACGCGCCATG +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQLKTVS*SSLRAM
Trigger: CATGGCGCGTAAACTGGACAAACTTACAGTTTTAAG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp AAAAATCAAAGGCTAGAGGGTCCACTGGATGTCACTGAAGTCCCCAGGGTCTCCACTTGCAAACCAGTTTaGGCATCTATTAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: KNQRLEGPLDVTEVPRVSTCKPV*ASISFS
Trigger: AGAAAAGCTAATAGATGCCAAAACTGGTTTGCAAGT...GGAGACCCTGGGGACTTCAGTGACATCCAGTGGACCCTCTAGCCTTTGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAGAGATTACTGTGAACTaGCAAACCAGTTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQEITVN*QTSFGI
Trigger: GATGCCAAAACTGGTTTGCAAGTTCACAGTAATCTC...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp GTGACATACACCATACACTCTCAAGTGAGTTCAGAAAGCATGTTCCGTGCTGGGGAGATTACTGTGAACTaGCAAACCAGTTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: VTYTIHSQVSSESMFRAGEITVN*QTSFGI
Trigger: GATGCCAAAACTGGTTTGCAAGTTCACAGTAATCTC...CCCAGCACGGAACATGCTTTCTGAACTCACTTGAGAGTGTATGGTGTATGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAATCTTTCTTCTTTGAGTaGGGTAAGCATCCATGCTCT +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQSFFFE*GKHPCS
Trigger: AGAGCATGGATGCTTACCCAACTCAAAGAAGAAAGA...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAATGTGCTCTTTCTTCTTaGAGTTGGGTAAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQCALSS*SWVSIH
Trigger: ATGGATGCTTACCCAACTCAAAGAAGAAAGAGCACA...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp ATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAAGTGTCGGACCCCATTCCAACAATATTaGGAGGCCAGCTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: ISLAHSKPDVSQVLKCRTPFQQY*EASFSS
Trigger: ACTTGAGAAGCTGGCCTCCAAATATTGTTGGAATGG...GGTCCGACACTTGAGGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAGAACTGCTTTGTGCTaGTCAGTCAAATTATTGTGG +
Preference number: 5 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCRTALC*SVKLLW
Trigger: CCACAATAATTTGACTGACAAGCACAAAGCAGTTCT...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCCTTTCATTAAACCTGTaGGACTCGAATCATCAAGGT +
Preference number: 5 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCLSLNL*DSNHQG
Trigger: ACCTTGATGATTCGAGTCCAACAGGTTTAATGAAAG...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp AACCCTCCAACATTGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACAATATGGGAGCATACTaGGCAAGCTATGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: NPPTLLGHYQFKRTVCQYNMGAY*ASYEEL
Trigger: TAGCTCTTCATAGCTTGCCAAGTATGCTCCCATATT...GTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp CTCATGAATGGACTGTCATTATCGTGGGAGTTGGTTAGTTACCTCAAGAGTGAGTTTGTACTAGCCACATaGCAAGTGCTCAGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: LMNGLSLSWELVSYLKSEFVLAT*QVLSSH
Trigger: GTGGCTACTGAGCACTTGCAATGTGGCTAGTACAAA...CTCACTCTTGAGGTAACTAACCAACTCCCACGATAATGACAGTCCATTCATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp CTCATGAATGGACTGTCATTATCGTGGGAGTTGGTTAGTTACCTCAAGAGTGAGGGCCTTCATTTTAACTaGGTGTTCACCATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LMNGLSLSWELVSYLKSEGLHFN*VFTIFH
Trigger: GTGGAAGATGGTGAACACCAAGTTAAAATGAAGGCC...CTCACTCTTGAGGTAACTAACCAACTCCCACGATAATGACAGTCCATTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACATCCATGCTCTTCTTaGACAGAGATTTTACAACTC +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQHPCSS*TEILQL
Trigger: GAGTTGTAAAATCTCTGTCAAAGAAGAGCATGGATG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAATCCTAAAATCGCTGTaGCCCTTTGATCTACATAGA +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQILKSL*PFDLHR
Trigger: TCTATGTAGATCAAAGGGCAACAGCGATTTTAGGAT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAACTCTGTAGAACTGCTTaGTGCTTGTCAGTCAAATTA +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQLCRTA*CLSVKL
Trigger: TAATTTGACTGACAAGCACAAAGCAGTTCTACAGAG...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp TGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCGAAACAACTCCTTATTaGACATACTCCTGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: WFSWEENVFPHIPVTGRCETTPY*TYSCSL
Trigger: TAAACTGCAGGAGTATGTCAAATAAGGAGTTGTTTC...GCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp ACTGAAGCAGAAAGTGTTATAAAGTATGATCCCCGAGAAGGTAGACATGCAGTAATCCCAGCTCTGTGCTaGCCTAAGTCTCCAAAGATC +
Preference number: 5 (lower is better)
Translates to: TEAESVIKYDPREGRHAVIPALC*PKSPKI
Trigger: GATCTTTGGAGACTTAGGCAAGCACAGAGCTGGGAT...TACTGCATGTCTACCTTCTCGGGGATCATACTTTATAACACTTTCTGCTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp CTTGTACCTGTGCCCCAGATTTTACGGAGATCCCTCAAAGACTATGACAACAAACTATCTGACTTTCATTaGCGAGGCACGAGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: LVPVPQILRRSLKDYDNKLSDFH*RGTREK
Trigger: TTTCTCTCTCGTGCCTCGCAAATGAAAGTCAGATAG...TTTGTTGTCATAGTCTTTGAGGGATCTCCGTAAAATCTGGGGCACAGGTACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAAGTTGTTCCTTTACTTaGGCAACATCTTTTGGATGT +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQSCSFT*ATSFGC
Trigger: ACATCCAAAAGATGTTGCCAAAGTAAAGGAACAACT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAACTTGCAAACCAGTTTaGGCATCTATTAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQTCKPV*ASISFS
Trigger: AGAAAAGCTAATAGATGCCAAAACTGGTTTGCAAGT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp TCCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCTCTTTCTTCTTTGAGTaGGGTAAGCATCCATGCTCT +
Preference number: 5 (lower is better)
Translates to: SPSCRISLAHSKPDVSQVSFFFE*GKHPCS
Trigger: AGAGCATGGATGCTTACCCAACTCAAAGAAGAAAGA...GACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCCCATTCCAACAATATTaGGAGGCCAGCTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: ESIINLVLLGGKRISPHPPFQQY*EASFSS
Trigger: ACTTGAGAAGCTGGCCTCCAAATATTGTTGGAATGG...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAAATCGCTGTTGCCCTTaGATCTACATAGACAAATTT +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQNRCCP*IYIDKF
Trigger: AAATTTGTCTATGTAGATCAAAGGGCAACAGCGATT...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000457040.6
ENST00000544915.5
CDS-3UTR CAA 90 bp AACCCTCCAACATTGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACGAAACAACTCCTTATTaGACATACTCCTGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: NPPTLLGHYQFKRTVCQYETTPY*TYSCSL
Trigger: TAAACTGCAGGAGTATGTCAAATAAGGAGTTGTTTC...GTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCATGGCTGTGTCATCATaGTCACATAGGGCATCGAAA +
Preference number: 5 (lower is better)
Translates to: ESIINLVLLGGKRISPHPMAVSS*SHRASK
Trigger: TTTCGATGCCCTATGTGACAATGATGACACAGCCAT...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp GTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGTGACAGGAAGATGCAAGAGTCTATAATAAACTaGGTTCTCTTGGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: VLLGGKRISPHPCDRKMQESIIN*VLLGGK
Trigger: TTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC...TTGCATCTTCCTGTCACAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp AACCCTCCAACATTGCTGGGACACTATCAGTTCAAGAGGACAGTGTGCCAATACGGTATGTATCTTACATaGATAGCACATCTCACTTTG +
Preference number: 5 (lower is better)
Translates to: NPPTLLGHYQFKRTVCQYGMYLT*IAHLTL
Trigger: CAAAGTGAGATGTGCTATCAATGTAAGATACATACC...GTATTGGCACACTGTCCTCTTGAACTGATAGTGTCCCAGCAATGTTGGAGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp TCCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTTCCTAGACCTCCCTaGGAAAGCATTTCTCATAAA +
Preference number: 5 (lower is better)
Translates to: SPSCRISLAHSKPDVSQVLPRPP*ESISHK
Trigger: TTTATGAGAAATGCTTTCCAAGGGAGGTCTAGGAAG...GACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp ATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAAGTGTCGGACCACTTGCAAACCAGTTTaGGCATCTATTAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: ISLAHSKPDVSQVLKCRTTCKPV*ASISFS
Trigger: AGAAAAGCTAATAGATGCCAAAACTGGTTTGCAAGT...GGTCCGACACTTGAGGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp CTCATGAATGGACTGTCATTATCGTGGGAGTTGGTTAGTTACCTCAAGAGTGAGCATCCATGCTCTTCTTaGACAGAGATTTTACAACTC +
Preference number: 5 (lower is better)
Translates to: LMNGLSLSWELVSYLKSEHPCSS*TEILQL
Trigger: GAGTTGTAAAATCTCTGTCAAAGAAGAGCATGGATG...CTCACTCTTGAGGTAACTAACCAACTCCCACGATAATGACAGTCCATTCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp TTACGGAGATCCCTCAAAGACTATGACAACAAAGACATCCTTTTCTGTCGTGACTGTGCTCTTTCTTCTTaGAGTTGGGTAAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: LRRSLKDYDNKDILFCRDCALSS*SWVSIH
Trigger: ATGGATGCTTACCCAACTCAAAGAAGAAAGAGCACA...GTCACGACAGAAAAGGATGTCTTTGTTGTCATAGTCTTTGAGGGATCTCCGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp CTCATGAATGGACTGTCATTATCGTGGGAGTTGGTTAGTTACCTCAAGAGTGAGATCCTAAAATCGCTGTaGCCCTTTGATCTACATAGA +
Preference number: 5 (lower is better)
Translates to: LMNGLSLSWELVSYLKSEILKSL*PFDLHR
Trigger: TCTATGTAGATCAAAGGGCAACAGCGATTTTAGGAT...CTCACTCTTGAGGTAACTAACCAACTCCCACGATAATGACAGTCCATTCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp CTCATGAATGGACTGTCATTATCGTGGGAGTTGGTTAGTTACCTCAAGAGTGAGCTTTCATTAAACCTGTaGGACTCGAATCATCAAGGT +
Preference number: 5 (lower is better)
Translates to: LMNGLSLSWELVSYLKSELSLNL*DSNHQG
Trigger: ACCTTGATGATTCGAGTCCAACAGGTTTAATGAAAG...CTCACTCTTGAGGTAACTAACCAACTCCCACGATAATGACAGTCCATTCATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp TTACGGAGATCCCTCAAAGACTATGACAACAAAGACATCCTTTTCTGTCGTGACTCATTATCGTGGGAGTaGGTTAGTTACCTCAAGAGT +
Preference number: 5 (lower is better)
Translates to: LRRSLKDYDNKDILFCRDSLSWE*VSYLKS
Trigger: ACTCTTGAGGTAACTAACCAACTCCCACGATAATGA...GTCACGACAGAAAAGGATGTCTTTGTTGTCATAGTCTTTGAGGGATCTCCGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCAACAGGAAACTGGATTaGAAGCCCACATTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: ESIINLVLLGGKRISPHPNRKLD*KPTLKS
Trigger: AGACTTCAATGTGGGCTTCAAATCCAGTTTCCTGTT...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp ATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCCTCAAGTGTCGGACCTGTCTGTTGGTATGTTaGTCATTAACATGTCTGACA +
Preference number: 5 (lower is better)
Translates to: ISLAHSKPDVSQVLKCRTCLLVC*SLTCLT
Trigger: TGTCAGACATGTTAATGACAAACATACCAACAGACA...GGTCCGACACTTGAGGACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp CATTTTGAAGGAAACACAAACCTTAGGAGAGCTACGGTATCATACAATGCATGGCTTAAAACTGTAAGTTaGTCCAGTTTACGCGCCATG +
Preference number: 5 (lower is better)
Translates to: HFEGNTNLRRATVSYNAWLKTVS*SSLRAM
Trigger: CATGGCGCGTAAACTGGACAAACTTACAGTTTTAAG...CCATGCATTGTATGATACCGTAGCTCTCCTAAGGTTTGTGTTTCCTTCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCCATCCATGCTCTTCTTaGACAGAGATTTTACAACTC +
Preference number: 5 (lower is better)
Translates to: ESIINLVLLGGKRISPHPHPCSS*TEILQL
Trigger: GAGTTGTAAAATCTCTGTCAAAGAAGAGCATGGATG...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp GAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCATCCTAAAATCGCTGTaGCCCTTTGATCTACATAGA +
Preference number: 5 (lower is better)
Translates to: ESIINLVLLGGKRISPHPILKSL*PFDLHR
Trigger: TCTATGTAGATCAAAGGGCAACAGCGATTTTAGGAT...GGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGCTCTGTAGAACTGCTTaGTGCTTGTCAGTCAAATTA +
Preference number: 5 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLLCRTA*CLSVKL
Trigger: TAATTTGACTGACAAGCACAAAGCAGTTCTACAGAG...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp TCCCCATCTTGTAGGATTTCTTTGGCTCATTCTAAACCTGATGTCTCTCAGGTCGAGTCTATAATAAACTaGGTTCTCTTGGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: SPSCRISLAHSKPDVSQVESIIN*VLLGGK
Trigger: TTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTC...GACCTGAGAGACATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGATGGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp GTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCCCACATCCCTGAATCGCTGTTGCCCTTaGATCTACATAGACAAATTT +
Preference number: 5 (lower is better)
Translates to: VYNKLGSLGRKTYFPTSLNRCCP*IYIDKF
Trigger: AAATTTGTCTATGTAGATCAAAGGGCAACAGCGATT...CAGGGATGTGGGGAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp ACTGAAGCAGAAAGTGTTATAAAGTATGATCCCCGAGAAGGTAGACATGCAGTAAGAACTGCTTTGTGCTaGTCAGTCAAATTATTGTGG +
Preference number: 5 (lower is better)
Translates to: TEAESVIKYDPREGRHAVRTALC*SVKLLW
Trigger: CCACAATAATTTGACTGACAAGCACAAAGCAGTTCT...TACTGCATGTCTACCTTCTCGGGGATCATACTTTATAACACTTTCTGCTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp CATTTTGAAGGAAACACAAACCTTAGGAGAGCTACGGTATCATACAATGCATGGAATATTGGCTATTTCTaGTACCTGTGCCCCAGATTT +
Preference number: 5 (lower is better)
Translates to: HFEGNTNLRRATVSYNAWNIGYF*YLCPRF
Trigger: AAATCTGGGGCACAGGTACAAGAAATAGCCAATATT...CCATGCATTGTATGATACCGTAGCTCTCCTAAGGTTTGTGTTTCCTTCAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS-3UTR CAA 90 bp CATTTTGAAGGAAACACAAACCTTAGGAGAGCTACGGTATCATACAATGCATGGTCTTGTAGGATTTCTTaGGCTCATTCTAAACCTGAT +
Preference number: 5 (lower is better)
Translates to: HFEGNTNLRRATVSYNAWSCRIS*AHSKPD
Trigger: ATCAGGTTTAGAATGAGCCAAAGAAATCCTACAAGA...CCATGCATTGTATGATACCGTAGCTCTCCTAAGGTTTGTGTTTCCTTCAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS GCA 90 bp AATCGCTGTTGCCCTTTGATCTACATAGACAAATTTTCCATTCACTaGAAACCGGGTTATAAATTCAGTTGGTTTCACATTAATCTCTCC +
Preference number: 5 (lower is better)
Translates to: NRCCPLIYIDKFSIH*KPGYKFSWFHINLS
Trigger: GGAGAGATTAATGTGAAACCAACTGAATTTATAACCCGGTTTGCAGTGAATGGAAAATTTGTCTATGTAGATCAAAGGGCAACAGCGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
ENST00000546179.5
CDS-3UTR CAA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCTCTGAATCACTTCCTTaGCGTTTTCGTGGAAACTCT +
Preference number: 5 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFSESLP*RFRGNS
Trigger: AGAGTTTCCACGAAAACGCAAAGGAAGTGATTCAGA...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCTGTGCTCTTTCTTCTTaGAGTTGGGTAAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFCALSS*SWVSIH
Trigger: ATGGATGCTTACCCAACTCAAAGAAGAAAGAGCACA...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCTCTGTAGAACTGCTTaGTGCTTGTCAGTCAAATTA +
Preference number: 5 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFLCRTA*CLSVKL
Trigger: TAATTTGACTGACAAGCACAAAGCAGTTCTACAGAG...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCCTTTCATTAAACCTGTaGGACTCGAATCATCAAGGT +
Preference number: 5 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFLSLNL*DSNHQG
Trigger: ACCTTGATGATTCGAGTCCAACAGGTTTAATGAAAG...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS CCA 90 bp ATAGACAAATTTTCCATTCACTGCAAACCGGGTTATAAATTCAGTTaGTTTCACATTAATCTCTCCACTGTTCTGTGGAACAATATATGG +
Preference number: 5 (lower is better)
Translates to: IDKFSIHCKPGYKFS*FHINLSTVLWNNIW
Trigger: CCATATATTGTTCCACAGAACAGTGGAGAGATTAATGTGAAACCAACTGAATTTATAACCCGGTTTGCAGTGAATGGAAAATTTGTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
ENST00000546179.5
CDS-3UTR CAA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCACTTGCAAACCAGTTTaGGCATCTATTAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFTCKPV*ASISFS
Trigger: AGAAAAGCTAATAGATGCCAAAACTGGTTTGCAAGT...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS-3UTR CAA 90 bp CTGAATAAAGGAGTCTATAATAAACTTGGTTCTCTTGGGAGGAAAACGTATTTCGAAACAACTCCTTATTaGACATACTCCTGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: LNKGVYNKLGSLGRKTYFETTPY*TYSCSL
Trigger: TAAACTGCAGGAGTATGTCAAATAAGGAGTTGTTTC...GAAATACGTTTTCCTCCCAAGAGAACCAAGTTTATTATAGACTCCTTTATTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266503.9
ENST00000544915.5
CDS GCA 72 bp GGCTCATGGCTGTGGACAGCAACAGTACTCTGGTTTTaGCTGGTAGCCTCTAGCTCCCCCATTTCAGAAGGA +
Preference number: 6 (lower is better)
Translates to: GSWLWTATVLWF*LVASSSPISEG
Trigger: TCCTTCTGAAATGGGGGAGCTAGAGGCTACCAGGCAAAACCAGAGTACTGTTGCTGTCCACAGCCATGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
CDS CCA 72 bp AGGAGTGGCTCATGGCTGTGGACAGCAACAGTACTCTaGTTTTGCCTGGTAGCCTCTAGCTCCCCCATTTCA +
Preference number: 6 (lower is better)
Translates to: RSGSWLWTATVL*FCLVASSSPIS
Trigger: TGAAATGGGGGAGCTAGAGGCTACCAGGCAAAACCAGAGTACTGTTGCTGTCCACAGCCATGAGCCACTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
CDS CAA 72 bp CTCTCTGAGCCAGGATCTGAAGGCCTTCATTTTAACTaGGTGTTCACCATCTTCCACTCTGCTGCCACTGGA +
Preference number: 6 (lower is better)
Translates to: LSEPGSEGLHFN*VFTIFHSAATG
Trigger: TCCAGTGGCAGCAGAGTGGAAGATGGTGAACACCAAGTTAAAATGAAGGCCTTCAGATCCTGGCTCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539558.1
CDS CAA 90 bp TGGTGTTCACCATCTTCCACTTGGGATGGGTCTGAATCACTTCCTTaGCGTTTTCGTGGAAACTCTGTCATGTGTGAGCTGAAAGACCCC +
Preference number: 6 (lower is better)
Translates to: WCSPSSTWDGSESLP*RFRGNSVMCELKDP
Trigger: GGGGTCTTTCAGCTCACACATGACAGAGTTTCCACGAAAACGCAAAGGAAGTGATTCAGACCCATCCCAAGTGGAAGATGGTGAACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS CAA 72 bp CCATCTTCCACTTGGGATGGGTCTGAATCACTTCCTTaGCGTTTTCGTGGAAACTCTGTCATGTGTGAGCTG +
Preference number: 6 (lower is better)
Translates to: PSSTWDGSESLP*RFRGNSVMCEL
Trigger: CAGCTCACACATGACAGAGTTTCCACGAAAACGCAAAGGAAGTGATTCAGACCCATCCCAAGTGGAAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544915.5
CDS TCA 72 bp GTAAGTTTGTCCAGTTTACGCGCCATGGGGTTGCACTaGGGGATCATTGCAGACAGTTCTTCAATCAGGTTA +
Preference number: 6 (lower is better)
Translates to: VSLSSLRAMGLH*GIIADSSSIRL
Trigger: TAACCTGATTGAAGAACTGTCTGCAATGATCCCTCAGTGCAACCCCATGGCGCGTAAACTGGACAAACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
ENST00000546179.5
CDS CAA 72 bp ATGATTCCTGACTGGGATGGGTCTGAATCACTTCCTTaGCGTTTTCGTGGAAACTCTGTCATGTGTGAGCTG +
Preference number: 6 (lower is better)
Translates to: MIPDWDGSESLP*RFRGNSVMCEL
Trigger: CAGCTCACACATGACAGAGTTTCCACGAAAACGCAAAGGAAGTGATTCAGACCCATCCCAGTCAGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266503.9
ENST00000311001.9
ENST00000539558.1
CDS TCA 72 bp GAATACACACGTGTCCTTCCAGCGTGGAGATTACTGTaGACTTGCAAACCAGTTTTGGCATCTATTAGCTTT +
Preference number: 6 (lower is better)
Translates to: EYTRVLPAWRLL*TCKPVLASISF
Trigger: AAAGCTAATAGATGCCAAAACTGGTTTGCAAGTTCACAGTAATCTCCACGCTGGAAGGACACGTGTGTATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
ENST00000546179.5
CDS TCA 72 bp CAACTGTGCACCATCACACTCCTGCAGTTTACAGTATaGGTATCTTTCATTAAACCTGTTGGACTCGAATCA +
Preference number: 6 (lower is better)
Translates to: QLCTITLLQFTV*VSFIKPVGLES
Trigger: TGATTCGAGTCCAACAGGTTTAATGAAAGATACTCATACTGTAAACTGCAGGAGTGTGATGGTGCACAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS CAA 90 bp TCACACTCCTGCAGTTTACAGTATGAGTATCTTTCATTAAACCTGTaGGACTCGAATCATCAAGGTATGAAGAAGACTGTAACCTCTGTA +
Preference number: 6 (lower is better)
Translates to: SHSCSLQYEYLSLNL*DSNHQGMKKTVTSV
Trigger: TACAGAGGTTACAGTCTTCTTCATACCTTGATGATTCGAGTCCAACAGGTTTAATGAAAGATACTCATACTGTAAACTGCAGGAGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546179.5
CDS GCA 72 bp CTGTGCTCTTTCTTCTTTGAGTTGGGTAAGCATCCATaGTCTTCTTTGACAGAGATTTTACAACTCTTTATC +
Preference number: 6 (lower is better)
Translates to: LCSFFFELGKHP*SSLTEILQLFI
Trigger: GATAAAGAGTTGTAAAATCTCTGTCAAAGAAGAGCATGGATGCTTACCCAACTCAAAGAAGAAAGAGCACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
ENST00000546179.5
CDS CAA 90 bp ACATACTCCTGCAGTTTACAGTATGAGTATCTTTCATTAAACCTGTaGGACTCGAATCATCAAGGTATGAAGAAGACTGTAACCTCTGTA +
Preference number: 6 (lower is better)
Translates to: TYSCSLQYEYLSLNL*DSNHQGMKKTVTSV
Trigger: TACAGAGGTTACAGTCTTCTTCATACCTTGATGATTCGAGTCCAACAGGTTTAATGAAAGATACTCATACTGTAAACTGCAGGAGTATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
CDS CAA 72 bp TTCTTCTTTGAGTTGGGTAAGCATCCATGCTCTTCTTaGACAGAGATTTTACAACTCTTTATCCGACAGAAA +
Preference number: 6 (lower is better)
Translates to: FFFELGKHPCSS*TEILQLFIRQK
Trigger: TTTCTGTCGGATAAAGAGTTGTAAAATCTCTGTCAAAGAAGAGCATGGATGCTTACCCAACTCAAAGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
ENST00000546179.5
CDS TCA 72 bp AACTCCTTATTTGACATACTCCTGCAGTTTACAGTATaGGTATCTTTCATTAAACCTGTTGGACTCGAATCA +
Preference number: 6 (lower is better)
Translates to: NSLFDILLQFTV*VSFIKPVGLES
Trigger: TGATTCGAGTCCAACAGGTTTAATGAAAGATACTCATACTGTAAACTGCAGGAGTATGTCAAATAAGGAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
CDS GCA 72 bp TGCCCTTTGATCTACATAGACAAATTTTCCATTCACTaGAAACCGGGTTATAAATTCAGTTGGTTTCACATT +
Preference number: 6 (lower is better)
Translates to: CPLIYIDKFSIH*KPGYKFSWFHI
Trigger: AATGTGAAACCAACTGAATTTATAACCCGGTTTGCAGTGAATGGAAAATTTGTCTATGTAGATCAAAGGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261178.9
ENST00000266503.9
ENST00000311001.9
ENST00000395901.6
ENST00000457040.6
ENST00000542388.1
ENST00000544915.5
ENST00000546179.5