RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARNTL (Homo sapiens)

Ensembl gene IDs: ENSG00000133794

Ensembl transcript IDs: ENST00000389707.8, ENST00000401424.6, ENST00000403290.6, ENST00000403482.7, ENST00000403510.8, ENST00000472842.1, ENST00000480685.5, ENST00000482049.6, ENST00000485918.2, ENST00000497429.5, ENST00000524392.5, ENST00000527998.5, ENST00000529050.5, ENST00000529388.6, ENST00000529825.6, ENST00000530357.6, ENST00000531665.5, ENST00000533520.5, ENST00000534544.5, ENST00000673626.1, ENST00000673817.1, ENST00000673834.1, ENST00000673868.1, ENST00000673888.1, ENST00000673892.1, ENST00000674108.1

Found 1438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: SSNCDEAAEVTPLIV*FVVFIQPHLCGWPA
Trigger: AGCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 90 bp GTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCC +
Preference number: 1 (lower is better)
Translates to: VELHENAVVQLRRGS*GYTPHCLVRCLHPA
Trigger: GGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 90 bp CCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGATGACAGCCATTGCTGCCTCATCATT +
Preference number: 1 (lower is better)
Translates to: PWQVTKVNRATQSSI*FQEAHDDSHCCLII
Trigger: AATGATGAGGCAGCAATGGCTGTCATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 90 bp TTTAACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTaGGGTGTCAGAGGAGGAGAGCTGCTCCTTGACTTTGGCAATATC +
Preference number: 1 (lower is better)
Translates to: FNWKSSFCIYEPLPG*GVRGGELLLDFGNI
Trigger: GATATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTT +
Preference number: 1 (lower is better)
Translates to: PVHWLWNYMRMQSSN*DEAAEVTPLIVWFV
Trigger: AACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 90 bp ATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACAC +
Preference number: 1 (lower is better)
Translates to: IDFTLISPFTGCGTT*ECSRPIATRQLRLH
Trigger: GTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 90 bp GCTCATGATGACAGCCATTGCTGCCTCATCATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTT +
Preference number: 1 (lower is better)
Translates to: AHDDSHCCLIITGTT*SLVVVNHVYTYVGV
Trigger: AACCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATCATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 90 bp ATGACAGCCATTGCTGCCTCATCATTACTGGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCA +
Preference number: 1 (lower is better)
Translates to: MTAIAASSLLGLLDP*SLSIMSIPMWGFSP
Trigger: TGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAGCAATGGCTGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 90 bp AACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCT +
Preference number: 1 (lower is better)
Translates to: NIFHRFHPDFPVHWL*NYMRMQSSNCDEAA
Trigger: AGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 90 bp CCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAG +
Preference number: 1 (lower is better)
Translates to: PRNIFHRFHPDFPVH*LWNYMRMQSSNCDE
Trigger: CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 90 bp GCTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTaGCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTC +
Preference number: 1 (lower is better)
Translates to: AVALWSTKTNFPSIA*RETYSIDFTLISPF
Trigger: GAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCAGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: SLEQWGGSSLGHLLQRAAELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...TGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: ESLEQWGGSSLGHLLQRAELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...TGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCAACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 2 (lower is better)
Translates to: ARVPPGIPGTVGWVLFGPTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...TGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVAGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 2 (lower is better)
Translates to: ARVPPGIPGTVGWVLFGPLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...TGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: SSNCDEAAEVTPLIVWFVGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...AACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 2 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 90 bp TGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: CSRPIATRQLRLHPS*SGSLSSSSPIFVGG
Trigger: GCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 2 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 2 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCATGCATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: LEQWGGSSLGHLLQRAACMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...GCATGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGAGGAGAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: SPVFASMSRSRGAVSEEERIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...CTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: TGSPVFASMSRSRGAVSETARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...CTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp TCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCATTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: SLEQWGGSSLGHLLQRAAFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...TGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCACATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 2 (lower is better)
Translates to: SLEQWGGSSLGHLLQRAAHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...TGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCAATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 2 (lower is better)
Translates to: ARVPPGIPGTVGWVLFGPIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...TGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCATGCCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: LEQWGGSSLGHLLQRAACHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...GCATGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: SRPIATRQLRLHPSLSGSTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...CGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: SNCDEAAEVTPLIVWFVVNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...GACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVALIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 2 (lower is better)
Translates to: PEPGLIVGHWKECLESLHPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: ASWRRGIRGRRTRDVQWAYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...AGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: APSLWVASFSNSLCCGLCTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: DDPLILWISMISSAIIRPQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACTACAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: IAVAKATCSVYSGHGKSLQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...TAGTGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 2 (lower is better)
Translates to: SRPIATRQLRLHPSLSGSDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...CGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 2 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVASEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 2 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPIWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 2 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 2 (lower is better)
Translates to: PEPGLIVGHWKECLESLHITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 2 (lower is better)
Translates to: PEPGLIVGHWKECLESLHNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTACAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 2 (lower is better)
Translates to: PEPGLIVGHWKECLESLHVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 2 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 2 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 2 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPISEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGATGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 2 (lower is better)
Translates to: GVPPFKIFLPPGEEASGGWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...TCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 2 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPLCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: LESLHLKSSCLLEKRHQGTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...CCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLITRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 2 (lower is better)
Translates to: WSLSIMSIPMWGFSPRIESPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...TTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: PEPGLIVGHWKECLESLHLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: TGSPVFASMSRSRGAVSELYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...CTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTCCAGCATATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: VYSGHGKSLKSTGPPSPAYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...TGCTGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 2 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDEHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 2 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 2 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGATCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: APSLWVASFSNSLCCGLCSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: PIATRQLRLHPSLSGSLSSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 2 (lower is better)
Translates to: SSNCDEAAEVTPLIVWFVNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...AACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 2 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 2 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDELCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CAGAAGAAAGAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATAACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: QKKERRAPEHNRDGPGVITRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...TATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTCTTTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPIGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 2 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AAGGTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 2 (lower is better)
Translates to: KVGSPPSRTLAKTTVLVEDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...CTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTAAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 2 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 2 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAATTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 2 (lower is better)
Translates to: WSLSIMSIPMWGFSPRIELRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...TTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCAACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 2 (lower is better)
Translates to: TIAVAKATCSVYSGHGKSTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...TGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 2 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: YWDYLILGRCQSCLYLCGNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...CCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: DDPLILWISMISSAIIRPLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 2 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCAGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 2 (lower is better)
Translates to: TIAVAKATCSVYSGHGKSDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...TGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: PIATRQLRLHPSLSGSLSVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...AGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: LRQRVSSLGHILRQTKIHNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...ATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDERTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 90 bp GCCATTGCTGCCTCATCATTACTGGGACTACTTGATCCTTGGTCGTaGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: AIAASSLLGLLDPWS*SIMSIPMWGFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAGCAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 90 bp AGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCA +
Preference number: 2 (lower is better)
Translates to: RNIFHRFHPDFPVHW*WNYMRMQSSNCDEA
Trigger: TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CAGAAGAAAGAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATATCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: QKKERRAPEHNRDGPGVISCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...TATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTCTTTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CAGGTAGTCAAACAAACTCTGACCAATCAGATCATTCTGGCTGTAGTTGAGGATACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: QVVKQTLTNQIILAVVEDTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...ATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTGTTTGACTACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 2 (lower is better)
Translates to: YRVPRNIFHRFHPDFPVHGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...GTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 2 (lower is better)
Translates to: KNRRTIRIWITWVLLSLADDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 2 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHITQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 2 (lower is better)
Translates to: VGSPPSRTLAKTTVLVETSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...TGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 2 (lower is better)
Translates to: GVPPFKIFLPPGEEASGGIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...TCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: LGLLDPWSLSIMSIPMWGDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GTCAAACAAACTCTGACCAATCAGATCATTCTGGCTGTAGTTGAGGATCTTGAAAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: VKQTLTNQIILAVVEDLENLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...TTCAAGATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTGTTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 2 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 2 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 2 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 2 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACTAGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: IAVAKATCSVYSGHGKSLDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...TAGTGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTTGGCAATATCTTTAGGATGCAGGTAGTCAAACAAACTCTGACCAATCAGATCAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: FGNIFRMQVVKQTLTNQINLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...GATCTGATTGGTCAGAGTTTGTTTGACTACCTGCATCCTAAAGATATTGCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGCTCCAGGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: LLKACYTSSYRRKNVVLQGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...CTGGAGCACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTACTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 2 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAATTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: LLPSGLQKQTFHLSRAEKLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...TTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATGAGATATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: FHRFHPDFPVHWLWNYMRYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTATATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTAACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCAACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: LSNFLDIALHVGTKEANSTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...TGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: KNRRTIRIWITWVLLSLAQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTACAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTT +
Preference number: 2 (lower is better)
Translates to: KNRRTIRIWITWVLLSLALCCGL*RSFFDL
Trigger: AAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673892.1
3UTR-3UTR GCA 90 bp TTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGTAGTGTGATAAAAGAACTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 2 (lower is better)
Translates to: LVQGFMKLNHRLRSVIKELCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...TTCTTTTATCACACTACGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 2 (lower is better)
Translates to: QRVSSLGHILRQTKIHLLHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...CAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATGAGACATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 2 (lower is better)
Translates to: FHRFHPDFPVHWLWNYMRHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTACTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: YRVPRNIFHRFHPDFPVHMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...GTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: DDPLILWISMISSAIIRPMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACTAATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: IAVAKATCSVYSGHGKSLMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...TAGTGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTACCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 2 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 2 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 2 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 2 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEEGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: KNRRTIRIWITWVLLSLAHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 2 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 2 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTTGCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: RTLAKTTVLVETIYSTSLLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...CAAGGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 2 (lower is better)
Translates to: QRVSSLGHILRQTKIHLLLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...CAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GGGGTTCTCACCAAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: GVLTKNRRTIRIWITWVLLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...GAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTTGGTGAGAACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: VSLSNFLDIALHVGTKEAYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...GGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: PGHCVACWYQRSQFIYKTYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...AGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: LDIALHVGTKEANSSIKLYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: PGHCVACWYQRSQFIYKTSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 2 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEEVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTTGGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 2 (lower is better)
Translates to: RTLAKTTVLVETIYSTSLDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...CAAGGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 2 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: QRVSSLGHILRQTKIHLLVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...CAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AAAATAGCTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: KIAVALWSTKTNFPSIACMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...GCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GTCAAACAAACTCTGACCAATCAGATCATTCTGGCTGTAGTTGAGGATCTTGAAGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: VKQTLTNQIILAVVEDLEGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...TTCAAGATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTGTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGACTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 2 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRLCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCACTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 2 (lower is better)
Translates to: SETKSIFPRSHPTTNKNPLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...TGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CAGGTAGTCAAACAAACTCTGACCAATCAGATCATTCTGGCTGTAGTTGAGGATCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 2 (lower is better)
Translates to: QVVKQTLTNQIILAVVEDLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...ATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTGTTTGACTACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: LSNFLDIALHVGTKEANSSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...TGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 2 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 2 (lower is better)
Translates to: SRTLAKTTVLVETIYSTSNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...GGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ACTCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 2 (lower is better)
Translates to: TLRQRVSSLGHILRQTKISWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...GATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 2 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AAAATAGCTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 2 (lower is better)
Translates to: KIAVALWSTKTNFPSIACSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...GCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAATTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 2 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEEFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: WSLSIMSIPMWGFSPRIEVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...TTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCTCATCATTACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: PHHYWDYLILGRCQSCLYVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...GTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 2 (lower is better)
Translates to: CLKLHIVRLTCINGSEMALPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATaGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTA +
Preference number: 2 (lower is better)
Translates to: GAGLVPLCLKLHIVR*TCINGSEMAFMKSV
Trigger: TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 2 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATACATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: NFLDIALHVGTKEANSSIHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 2 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEESWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCATAGATGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: STKTNFPSIACRETYSIDDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...ATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 2 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLILCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: CLKLHIVRLTCINGSEMALYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 2 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGC +
Preference number: 3 (lower is better)
Translates to: ARVPPGIPGTVG*VLFGPPSPEGS
Trigger: GCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: ARVPPGIPGTVGWVLFGPPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...TGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: ESLEQWGGSSLGHLLQRARLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...TGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp TGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGG +
Preference number: 3 (lower is better)
Translates to: CDEAAEVTPLIV*FVVFIQPHLCG
Trigger: CCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCATGCACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 3 (lower is better)
Translates to: LEQWGGSSLGHLLQRAACTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...GCATGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 3 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 3 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 3 (lower is better)
Translates to: PEPGLIVGHWKECLESLHSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 72 bp GTCACTAAAGTCAACAGGGCCACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGATGACAGCCATTGCTGC +
Preference number: 3 (lower is better)
Translates to: VTKVNRATQSSI*FQEAHDDSHCC
Trigger: GCAGCAATGGCTGTCATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGTGGCCCTGTTGACTTTAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 3 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDEHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 72 bp ACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATTGCGACGAGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: TLISPFTGCGTT*ECSRPIATRQL
Trigger: CAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 3 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 3 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 3 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCCCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 3 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 3 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVASCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 72 bp CATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGTCTGGTTCGTTGTCTT +
Preference number: 3 (lower is better)
Translates to: HENAVVQLRRGS*GYTPHCLVRCL
Trigger: AAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 72 bp TGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTTACACCCCTCATTGTC +
Preference number: 3 (lower is better)
Translates to: WLWNYMRMQSSN*DEAAEVTPLIV
Trigger: GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp TGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGA +
Preference number: 3 (lower is better)
Translates to: CLVRCLHPAPSL*VASFSNSLCCG
Trigger: TCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 3 (lower is better)
Translates to: APSLWVASFSNSLCCGLCFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTTACCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: EPGLIVGHWKECLESLHLPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...TAAATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCCTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 3 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 3 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TGTAGTGTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 3 (lower is better)
Translates to: CSVYSGHGKSLKSTGPPSSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...ACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAACACTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 3 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDESLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 72 bp GATGTTCAATGGGCTGGAGCCACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGATTTCCATGATTTCCTC +
Preference number: 3 (lower is better)
Translates to: DVQWAGATARRR*PSYPVDFHDFL
Trigger: GAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGTGGCTCCAGCCCATTGAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp TGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGT +
Preference number: 3 (lower is better)
Translates to: WFVVFIQPHLCG*PAFQIACAVDC
Trigger: ACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTTAACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 3 (lower is better)
Translates to: EPGLIVGHWKECLESLHLTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...TAAATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGACTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 3 (lower is better)
Translates to: GVPPFKIFLPPGEEASGGLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...TCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCACATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 3 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCAGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 3 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCACCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEAPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGAGAATGCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 3 (lower is better)
Translates to: FPRSHPTTNKNPSAALRMLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...CATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp ATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACTATTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 3 (lower is better)
Translates to: IAVAKATCSVYSGHGKSLFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...TAGTGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 3 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp CATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAGTCGTCCAATTGCGAC +
Preference number: 3 (lower is better)
Translates to: HRFHPDFPVHWL*NYMRMQSSNCD
Trigger: GTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGAGAATGACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 3 (lower is better)
Translates to: FPRSHPTTNKNPSAALRMTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...CATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp ACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: TIAVAKATCSVYSGHGKSPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...TGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 3 (lower is better)
Translates to: DDPLILWISMISSAIIRPASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 3 (lower is better)
Translates to: KNRRTIRIWITWVLLSLASLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 3 (lower is better)
Translates to: VGSPPSRTLAKTTVLVETIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...TGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 72 bp GCAGGTAGAGGGGAAGTCCTTGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCATCCTACAGAAGAAAGA +
Preference number: 3 (lower is better)
Translates to: AGRGEVLVFNLY*RPVTLHPTEER
Trigger: TCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp ATTGCTGCCTCATCATTACTGGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCTATACCTATGTGGGGG +
Preference number: 3 (lower is better)
Translates to: IAASSLLGLLDP*SLSIMSIPMWG
Trigger: CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 3 (lower is better)
Translates to: YWDYLILGRCQSCLYLCGFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...CCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATGAGACCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: FHRFHPDFPVHWLWNYMRPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 3 (lower is better)
Translates to: KNRRTIRIWITWVLLSLAASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 3 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAATCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 3 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEESLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 72 bp GACAGCCATTGCTGCCTCATCATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAATCATGTCTATACCTAT +
Preference number: 3 (lower is better)
Translates to: DSHCCLIITGTT*SLVVVNHVYTY
Trigger: ATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAGCAATGGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 3 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AAAATAGCTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 3 (lower is better)
Translates to: KIAVALWSTKTNFPSIACHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...GCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 3 (lower is better)
Translates to: LRQRVSSLGHILRQTKIHASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...ATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATATCTGTTTTACGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: ERRAPEHNRDGPGVISVLRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...TAAAACAGATATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 3 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp ATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGAATGCAGTCGTCCAAT +
Preference number: 3 (lower is better)
Translates to: IFHRFHPDFPVH*LWNYMRMQSSN
Trigger: ATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAATTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 3 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEEFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 3 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKSCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAACTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 3 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTACATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 3 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 3 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTAAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 3 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELSCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 3 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATCAACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 3 (lower is better)
Translates to: SIMSIPMWGFSPRIEELSTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...TGATAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 72 bp CTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTaGCGAGAAACATATTCCATAGATTTCACCCTGATT +
Preference number: 3 (lower is better)
Translates to: LWSTKTNFPSIA*RETYSIDFTLI
Trigger: AATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCCTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 3 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 72 bp TATGGATTGGTGGCACCTCTTAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACAGTAAGTTTATCTAAT +
Preference number: 3 (lower is better)
Translates to: YGLVAPLNVFMC*TAILSTVSLSN
Trigger: ATTAGATAAACTTACTGTGCTAAGGATGGCTGTTCAGCACATGAAAACATTAAGAGGTGCCACCAATCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 3 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: ARVPPGIPGTVGWVLFGPQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...TGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCAGCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PARVPPGIPGTVGWVLFGTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...CCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCACTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ESLEQWGGSSLGHLLQRALLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...TGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCAGCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: PARVPPGIPGTVGWVLFGTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...CCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PEPGLIVGHWKECLESLHGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: PEPGLIVGHWKECLESLHSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCCGGGGTGCGGTGTCAGAGGAGGAGAGCTGCTCCTTGACTTTGGCAATATCTAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SRGAVSEEESCSLTLAISSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...AGATATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGACACCGCACCCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVAGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: QSSNCDEAAEVTPLIVWFSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...GAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCATGCACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LEQWGGSSLGHLLQRAACTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...GCATGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTCCAGCAGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VYSGHGKSLKSTGPPSPAGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...TGCTGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGAGGAGGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SPVFASMSRSRGAVSEEEGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...CTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: APSLWVASFSNSLCCGLCSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGACCTCCAGCCATTGTaGTCCCCAAATTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRDLQPL*SPNSTC
Trigger: ACAGGTCGAATTTGGGGAGCACAATGGCTGGAGGTC...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CCA 90 bp GTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTCCAGCATCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VYSGHGKSLKSTGPPSPASPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...TGCTGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGATCGACTGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRSTGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCAGTCGA...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674108.1
CDS-3UTR TCA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDEELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LESLHLKSSCLLEKRHQGELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...CCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVAESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: APSLWVASFSNSLCCGLCSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLISPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCAGCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: PARVPPGIPGTVGWVLFGGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...CCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTAGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PPFKIFLPPGEEASGGGVGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...TACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCAACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ARVPPGIPGTVGWVLFGPTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...TGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: ASWRRGIRGRRTRDVQWALSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...AGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCATCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEASAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCACATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: ESLEQWGGSSLGHLLQRAHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...TGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLISPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGAGGAGACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: SPVFASMSRSRGAVSEEETRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...CTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: ASWRRGIRGRRTRDVQWALIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...AGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: SSNCDEAAEVTPLIVWFVLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...AACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGCTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCACTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LGLLDPWSLSIMSIPMWGSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: VGSPPSRTLAKTTVLVETESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...TGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: TGSPVFASMSRSRGAVSETRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...CTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCAGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: SLEQWGGSSLGHLLQRAAGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...TGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTAGTGTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTTTCCAAAAACCACAGTaGCCGGCACACAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: CSVYSGHGKSLKSTGPPSFQKPQ*PAHRKP
Trigger: GGGCTTCCTGTGTGCCGGGCACTGTGGTTTTTGGAA...ACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAACACTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673834.1
ENST00000673888.1
CDS-3UTR GCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCAGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVATQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: SRPIATRQLRLHPSLSGSPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...CGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGCTCCAGGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLKACYTSSYRRKNVVLQGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...CTGGAGCACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 72 bp CCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTT +
Preference number: 4 (lower is better)
Translates to: PIATRQLRLHPS*SGSLSSSSPIF
Trigger: AAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: PEPGLIVGHWKECLESLHCHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGTGGTCTGCCATTGGATaGTCTGAAGTCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TGSPVFASMSRSRGAVSEWSAIG*SEVTVL
Trigger: AAGAACTGTGACTTCAGATCATCCAATGGCAGACCA...CTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: TIAVAKATCSVYSGHGKSQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...TGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: KSIFPRSHPTTNKNPSAAQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...GGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGAGGAGTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: SPVFASMSRSRGAVSEEESCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...CTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGATTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCAAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PIATRQLRLHPSLSGSLSWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...AGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: VGSPPSRTLAKTTVLVETMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...TGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCAATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: SLEQWGGSSLGHLLQRAAIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...TGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LGLLDPWSLSIMSIPMWGWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SRPIATRQLRLHPSLSGSCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...CGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCACTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: ESLEQWGGSSLGHLLQRALLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...TGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: TGSPVFASMSRSRGAVSEDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...CTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPITRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTAAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PPFKIFLPPGEEASGGGVNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...TACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SSNCDEAAEVTPLIVWFVLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...AACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SNCDEAAEVTPLIVWFVVRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...GACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPIRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PEPGLIVGHWKECLESLHYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: TGSPVFASMSRSRGAVSEVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...CTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCCCGGGGTGCGGTGTCAGAGGAGGAGAGCTGCTCCTTGACTTTGGCAATATCTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: SRGAVSEEESCSLTLAISSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AGATATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGACACCGCACCCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTGGAGCCACAGCTATTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: EASGGGVLVMFNGLEPQLLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...TAGCTGTGGCTCCAGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: PEPGLIVGHWKECLESLHQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDEWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTAGGGGCCTCTGGACTTaGTCACCTCAAAGCGATTTT +
Preference number: 4 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLIRGLWT*SPQSDF
Trigger: AAAATCGCTTTGAGGTGACCAAGTCCAGAGGCCCCT...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KSIFPRSHPTTNKNPSAATPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...GGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: APSLWVASFSNSLCCGLCCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLIPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: STFTEGLLHFILQKKERRGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...ACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: YRVPRNIFHRFHPDFPVHESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...GTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: STFTEGLLHFILQKKERRSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...ACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTAACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: PPFKIFLPPGEEASGGGVTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...TACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ASWRRGIRGRRTRDVQWARTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...AGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SRPIATRQLRLHPSLSGSLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...CGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTCCAGCACTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: VYSGHGKSLKSTGPPSPALPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...TGCTGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTAGTGAATGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: PPFKIFLPPGEEASGGGVVNGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCATTCAC...TACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000673626.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR TCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPICHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: SSNCDEAAEVTPLIVWFVGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...AACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVASCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: STFTEGLLHFILQKKERRGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...ACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCTCTTCCAAAAACCAATaGAGGCCCAGGATTCCACAT +
Preference number: 4 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSSSKNQ*RPRIPH
Trigger: ATGTGGAATCCTGGGCCTTCATTGGTTTTTGGAAGA...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000673626.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: DDPLILWISMISSAIIRPGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVAFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LDIALHVGTKEANSSIKLSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: PPFKIFLPPGEEASGGGVHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...TACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATGAGAACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FHRFHPDFPVHWLWNYMRTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AAGGTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: KVGSPPSRTLAKTTVLVECNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...CTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCACCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEAPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CAGGTAGTCAAACAAACTCTGACCAATCAGATCATTCTGGCTGTAGTTGAGGATTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QVVKQTLTNQIILAVVEDSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...ATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTGTTTGACTACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVADPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: PIATRQLRLHPSLSGSLSMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...AGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 72 bp CATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: HCLVRCLHPAPS*WVASFSNSLCC
Trigger: ACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAAGGCACCTCCGTCCCTaGCCTACTTTCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEERHLRP*PTFCLP
Trigger: GGGAAGGCAGAAAGTAGGTCAGGGACGGAGGTGCCT...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674108.1
CDS-3UTR TCA 90 bp AAGGTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGTGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: KVGSPPSRTLAKTTVLVECHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...CTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGTGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWCHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPIVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: YWDYLILGRCQSCLYLCGLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...CCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PGHCVACWYQRSQFIYKTGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...AGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGCTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCGTTGGAGGGACACAGTaGGCGCCCACAGGCTCACGG +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSVGGTQ*APTGSR
Trigger: CCGTGAGCCTGTGGGCGCTCACTGTGTCCCTCCAAC...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403482.7
CDS-3UTR TCA 90 bp CGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGCCCAAATTCGACCTGTaGACTTCAGCAGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: RVPRNIFHRFHPDFPVHWPKFDL*TSAERT
Trigger: TGTCCTTTCTGCTGAAGTTCACAGGTCGAATTTGGG...CCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673834.1
CDS-3UTR GCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: APSLWVASFSNSLCCGLCFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCTTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SLSNFLDIALHVGTKEANSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...ATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: YRVPRNIFHRFHPDFPVHNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...GTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGAGGCACCTCCGTCCCTaGCCTACTTTCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLRHLRP*PTFCLP
Trigger: GGGAAGGCAGAAAGTAGGTCAGGGACGGAGGTGCCT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTAGGCACCTCCGTCCCTaGCCTACTTTCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTRHLRP*PTFCLP
Trigger: GGGAAGGCAGAAAGTAGGTCAGGGACGGAGGTGCCT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000674108.1
CDS-3UTR TCA 90 bp GGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: GVPPFKIFLPPGEEASGGNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...TCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTAGTGTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: CSVYSGHGKSLKSTGPPSVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...ACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAACACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATATCTGTTTTAACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: ERRAPEHNRDGPGVISVLTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...TAAAACAGATATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCAATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTCTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCAGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SETKSIFPRSHPTTNKNPGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...TGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCATGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: TIAVAKATCSVYSGHGKSWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...TGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACACTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTT +
Preference number: 4 (lower is better)
Translates to: VGSPPSRTLAKTTVLVETLCCGL*RSFFDL
Trigger: AAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...TGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673892.1
CDS-3UTR GCA 90 bp CTGGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LESLHLKSSCLLEKRHQGFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...CCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTTATTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: EPGLIVGHWKECLESLHLLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...TAAATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMASAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGGACCTCCAGCCATTGTaGTCCCCAAATTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: QRVSSLGHILRQTKIHLLDLQPL*SPNSTC
Trigger: ACAGGTCGAATTTGGGGAGCACAATGGCTGGAGGTC...CAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CCA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: APSLWVASFSNSLCCGLCLCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LSFLGVLYILTFHEGHLCPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...ACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATACCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: NFLDIALHVGTKEANSSIPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMASPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGCTCCAGACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: LLKACYTSSYRRKNVVLQTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...CTGGAGCACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KNRRTIRIWITWVLLSLANLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCAATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEAMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTTCTCTGGTCTGCCATTaGATGATCACAGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSSLVCH*MITVPG
Trigger: GCCGGGCACTGTGATCATCCAATGGCAGACCAGAGA...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530357.6
CDS-3UTR TCA 90 bp TTTTTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTAGGCACCTCCGTCCCTaGCCTACTTTCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: FLSFLGVLYILTFHEGHLRHLRP*PTFCLP
Trigger: GGGAAGGCAGAAAGTAGGTCAGGGACGGAGGTGCCT...AAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529825.6
ENST00000674108.1
CDS-3UTR TCA 90 bp ACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAACAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: TVSLSNFLDIALHVGTKEQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEAVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAACTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: STVSLSNFLDIALHVGTKLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATACTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NFLDIALHVGTKEANSSILLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAAGCAATAAGGAAACGTaGGTCAGGCCTGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVSNKET*VRPAQN
Trigger: GTTCTGAGCAGGCCTGACTCACGTTTCCTTATTGCT...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524392.5
CDS-3UTR GCA 90 bp TACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: YWDYLILGRCQSCLYLCGLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...CCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: LESLHLKSSCLLEKRHQGFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...CCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLIFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: HLKSSCLLEKRHQGEAYSFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...CGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTTAATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: EPGLIVGHWKECLESLHLIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...TAAATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCATCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCAACGTGAGTCAGGCCTaGTCAGAACTGTGCACCATT +
Preference number: 4 (lower is better)
Translates to: KNRRTIRIWITWVLLSLANVSQA*SELCTI
Trigger: AATGGTGCACAGTTCTGAGCAGGCCTGACTCACGTT...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524392.5
CDS-3UTR GCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAGACCTCCAGCCATTGTaGTCCCCAAATTCGACTGGT +
Preference number: 4 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRDLQPL*SPNSTG
Trigger: ACCAGTCGAATTTGGGGAGCACAATGGCTGGAGGTC...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674108.1
CDS-3UTR CCA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTAGGGGCCTCTGGACTTaGTCACCTCAAAGCGATTTT +
Preference number: 4 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFRGLWT*SPQSDF
Trigger: AAAATCGCTTTGAGGTGACCAAGTCCAGAGGCCCCT...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: NFLDIALHVGTKEANSSITPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAATGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: STVSLSNFLDIALHVGTKWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SRTLAKTTVLVETIYSTSWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...GGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: DDPLILWISMISSAIIRPTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATATCTGTTTTACCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: ERRAPEHNRDGPGVISVLPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...TAAAACAGATATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: PIATRQLRLHPSLSGSLSIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...AGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCAGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LSNFLDIALHVGTKEANSESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...TGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: SRTLAKTTVLVETIYSTSESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...GGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMASPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTTTTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FLSFLGVLYILTFHEGHLSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...AAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEADPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: STFTEGLLHFILQKKERRNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...ACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCAAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GVPPFKIFLPPGEEASGGRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...TCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTGTGAATGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFVNGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCATTCAC...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR TCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTAGGCACCTCCGTCCCTaGCCTACTTTCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSRHLRP*PTFCLP
Trigger: GGGAAGGCAGAAAGTAGGTCAGGGACGGAGGTGCCT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000674108.1
CDS-3UTR TCA 90 bp TTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGAGAATGTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FPRSHPTTNKNPSAALRMYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...CATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGAGAATGAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: FPRSHPTTNKNPSAALRMNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...CATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: LGLLDPWSLSIMSIPMWGVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CAGAAGAAAGAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATAGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: QKKERRAPEHNRDGPGVIVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...TATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTCTTTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLILRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGCTCCAGGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: LLKACYTSSYRRKNVVLQGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...CTGGAGCACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHITARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTTCCAAAAACCACAGTaGCCGGCACACAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCFQKPQ*PAHRKP
Trigger: GGGCTTCCTGTGTGCCGGGCACTGTGGTTTTTGGAA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
CDS-3UTR GCA 90 bp TTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATTCCAAAAACCACAGTaGCCGGCACACAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LSNFLDIALHVGTKEANSFQKPQ*PAHRKP
Trigger: GGGCTTCCTGTGTGCCGGGCACTGTGGTTTTTGGAA...TGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000482049.6
ENST00000673834.1
ENST00000673888.1
CDS-3UTR GCA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: LDIALHVGTKEANSSIKLSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AAGGTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: KVGSPPSRTLAKTTVLVESWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...CTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: KNRRTIRIWITWVLLSLASEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RVPRNIFHRFHPDFPVHWHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...CCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: KNRRTIRIWITWVLLSLAHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGGGTTCTCACCAAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: GVLTKNRRTIRIWITWVLTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...GAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTTGGTGAGAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAATGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TVSLSNFLDIALHVGTKEWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTTTTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FLSFLGVLYILTFHEGHLWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...AAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RVPRNIFHRFHPDFPVHWLCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...CCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGTAGTGTGATAAAAGAACCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: LVQGFMKLNHRLRSVIKEPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...TTCTTTTATCACACTACGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGGGTTCTCACCAAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GVLTKNRRTIRIWITWVLPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...GAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTTGGTGAGAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCATCTGCTGCCCTGAGAATGAGGTGTTTCAATTCATCGTCTGATAGAAAAGTTCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: PSAALRMRCFNSSSDRKVPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...AACTTTTCTATCAGACGATGAATTGAAACACCTCATTCTCAGGGCAGCAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: HLKSSCLLEKRHQGEAYSIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...CGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLIIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCACCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCATCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6