RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARNTL (Homo sapiens)

Ensembl gene IDs: ENSG00000133794

Ensembl transcript IDs: ENST00000389707.8, ENST00000401424.6, ENST00000403290.6, ENST00000403482.7, ENST00000403510.8, ENST00000472842.1, ENST00000480685.5, ENST00000482049.6, ENST00000485918.2, ENST00000497429.5, ENST00000524392.5, ENST00000527998.5, ENST00000529050.5, ENST00000529388.6, ENST00000529825.6, ENST00000530357.6, ENST00000531665.5, ENST00000533520.5, ENST00000534544.5, ENST00000673626.1, ENST00000673817.1, ENST00000673834.1, ENST00000673868.1, ENST00000673888.1, ENST00000673892.1, ENST00000674108.1

Found 1438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: SSNCDEAAEVTPLIV*FVVFIQPHLCGWPA
Trigger: AGCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 90 bp GTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCC +
Preference number: 1 (lower is better)
Translates to: VELHENAVVQLRRGS*GYTPHCLVRCLHPA
Trigger: GGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 90 bp CCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGATGACAGCCATTGCTGCCTCATCATT +
Preference number: 1 (lower is better)
Translates to: PWQVTKVNRATQSSI*FQEAHDDSHCCLII
Trigger: AATGATGAGGCAGCAATGGCTGTCATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 90 bp TTTAACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTaGGGTGTCAGAGGAGGAGAGCTGCTCCTTGACTTTGGCAATATC +
Preference number: 1 (lower is better)
Translates to: FNWKSSFCIYEPLPG*GVRGGELLLDFGNI
Trigger: GATATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTT +
Preference number: 1 (lower is better)
Translates to: PVHWLWNYMRMQSSN*DEAAEVTPLIVWFV
Trigger: AACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 90 bp ATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACAC +
Preference number: 1 (lower is better)
Translates to: IDFTLISPFTGCGTT*ECSRPIATRQLRLH
Trigger: GTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 90 bp GCTCATGATGACAGCCATTGCTGCCTCATCATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTT +
Preference number: 1 (lower is better)
Translates to: AHDDSHCCLIITGTT*SLVVVNHVYTYVGV
Trigger: AACCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATCATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 90 bp ATGACAGCCATTGCTGCCTCATCATTACTGGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCA +
Preference number: 1 (lower is better)
Translates to: MTAIAASSLLGLLDP*SLSIMSIPMWGFSP
Trigger: TGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAGCAATGGCTGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 90 bp AACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCT +
Preference number: 1 (lower is better)
Translates to: NIFHRFHPDFPVHWL*NYMRMQSSNCDEAA
Trigger: AGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 90 bp CCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAG +
Preference number: 1 (lower is better)
Translates to: PRNIFHRFHPDFPVH*LWNYMRMQSSNCDE
Trigger: CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 90 bp GCTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTaGCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTC +
Preference number: 1 (lower is better)
Translates to: AVALWSTKTNFPSIA*RETYSIDFTLISPF
Trigger: GAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCAGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: SLEQWGGSSLGHLLQRAAELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...TGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: ESLEQWGGSSLGHLLQRAELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...TGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCAACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 2 (lower is better)
Translates to: ARVPPGIPGTVGWVLFGPTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...TGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVAGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 2 (lower is better)
Translates to: ARVPPGIPGTVGWVLFGPLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...TGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: SSNCDEAAEVTPLIVWFVGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...AACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 2 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 90 bp TGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: CSRPIATRQLRLHPS*SGSLSSSSPIFVGG
Trigger: GCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 2 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 2 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCATGCATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: LEQWGGSSLGHLLQRAACMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...GCATGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGAGGAGAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: SPVFASMSRSRGAVSEEERIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...CTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: TGSPVFASMSRSRGAVSETARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...CTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp TCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCATTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: SLEQWGGSSLGHLLQRAAFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...TGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCACATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 2 (lower is better)
Translates to: SLEQWGGSSLGHLLQRAAHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...TGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCAATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 2 (lower is better)
Translates to: ARVPPGIPGTVGWVLFGPIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...TGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCATGCCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: LEQWGGSSLGHLLQRAACHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...GCATGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: SRPIATRQLRLHPSLSGSTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...CGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: SNCDEAAEVTPLIVWFVVNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...GACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVALIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 2 (lower is better)
Translates to: PEPGLIVGHWKECLESLHPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: ASWRRGIRGRRTRDVQWAYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...AGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: APSLWVASFSNSLCCGLCTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: DDPLILWISMISSAIIRPQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACTACAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: IAVAKATCSVYSGHGKSLQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...TAGTGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 2 (lower is better)
Translates to: SRPIATRQLRLHPSLSGSDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...CGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 2 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVASEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 2 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPIWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 2 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 2 (lower is better)
Translates to: PEPGLIVGHWKECLESLHITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 2 (lower is better)
Translates to: PEPGLIVGHWKECLESLHNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTACAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 2 (lower is better)
Translates to: PEPGLIVGHWKECLESLHVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 2 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 2 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 2 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPISEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGATGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 2 (lower is better)
Translates to: GVPPFKIFLPPGEEASGGWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...TCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 2 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPLCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: LESLHLKSSCLLEKRHQGTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...CCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLITRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 2 (lower is better)
Translates to: WSLSIMSIPMWGFSPRIESPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...TTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: PEPGLIVGHWKECLESLHLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: TGSPVFASMSRSRGAVSELYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...CTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTCCAGCATATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: VYSGHGKSLKSTGPPSPAYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...TGCTGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 2 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDEHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 2 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 2 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGATCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: APSLWVASFSNSLCCGLCSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: PIATRQLRLHPSLSGSLSSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 2 (lower is better)
Translates to: SSNCDEAAEVTPLIVWFVNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...AACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 2 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 2 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDELCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CAGAAGAAAGAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATAACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: QKKERRAPEHNRDGPGVITRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...TATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTCTTTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPIGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 2 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AAGGTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 2 (lower is better)
Translates to: KVGSPPSRTLAKTTVLVEDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...CTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTAAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 2 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 2 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAATTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 2 (lower is better)
Translates to: WSLSIMSIPMWGFSPRIELRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...TTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCAACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 2 (lower is better)
Translates to: TIAVAKATCSVYSGHGKSTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...TGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 2 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: YWDYLILGRCQSCLYLCGNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...CCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: DDPLILWISMISSAIIRPLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 2 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCAGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 2 (lower is better)
Translates to: TIAVAKATCSVYSGHGKSDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...TGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: PIATRQLRLHPSLSGSLSVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...AGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: LRQRVSSLGHILRQTKIHNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...ATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDERTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 90 bp GCCATTGCTGCCTCATCATTACTGGGACTACTTGATCCTTGGTCGTaGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: AIAASSLLGLLDPWS*SIMSIPMWGFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAGCAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 90 bp AGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCA +
Preference number: 2 (lower is better)
Translates to: RNIFHRFHPDFPVHW*WNYMRMQSSNCDEA
Trigger: TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CAGAAGAAAGAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATATCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: QKKERRAPEHNRDGPGVISCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...TATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTCTTTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CAGGTAGTCAAACAAACTCTGACCAATCAGATCATTCTGGCTGTAGTTGAGGATACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: QVVKQTLTNQIILAVVEDTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...ATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTGTTTGACTACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 2 (lower is better)
Translates to: YRVPRNIFHRFHPDFPVHGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...GTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 2 (lower is better)
Translates to: KNRRTIRIWITWVLLSLADDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 2 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHITQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 2 (lower is better)
Translates to: VGSPPSRTLAKTTVLVETSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...TGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 2 (lower is better)
Translates to: GVPPFKIFLPPGEEASGGIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...TCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: LGLLDPWSLSIMSIPMWGDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GTCAAACAAACTCTGACCAATCAGATCATTCTGGCTGTAGTTGAGGATCTTGAAAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: VKQTLTNQIILAVVEDLENLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...TTCAAGATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTGTTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 2 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 2 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 2 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 2 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACTAGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: IAVAKATCSVYSGHGKSLDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...TAGTGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTTGGCAATATCTTTAGGATGCAGGTAGTCAAACAAACTCTGACCAATCAGATCAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: FGNIFRMQVVKQTLTNQINLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...GATCTGATTGGTCAGAGTTTGTTTGACTACCTGCATCCTAAAGATATTGCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGCTCCAGGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: LLKACYTSSYRRKNVVLQGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...CTGGAGCACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTACTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 2 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAATTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: LLPSGLQKQTFHLSRAEKLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...TTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATGAGATATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: FHRFHPDFPVHWLWNYMRYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTATATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTAACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCAACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: LSNFLDIALHVGTKEANSTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...TGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: KNRRTIRIWITWVLLSLAQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTACAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTT +
Preference number: 2 (lower is better)
Translates to: KNRRTIRIWITWVLLSLALCCGL*RSFFDL
Trigger: AAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673892.1
3UTR-3UTR GCA 90 bp TTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGTAGTGTGATAAAAGAACTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 2 (lower is better)
Translates to: LVQGFMKLNHRLRSVIKELCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...TTCTTTTATCACACTACGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 2 (lower is better)
Translates to: QRVSSLGHILRQTKIHLLHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...CAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATGAGACATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 2 (lower is better)
Translates to: FHRFHPDFPVHWLWNYMRHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTACTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: YRVPRNIFHRFHPDFPVHMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...GTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: DDPLILWISMISSAIIRPMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACTAATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: IAVAKATCSVYSGHGKSLMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...TAGTGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTACCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 2 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 2 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 2 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 2 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEEGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: KNRRTIRIWITWVLLSLAHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 2 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 2 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTTGCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: RTLAKTTVLVETIYSTSLLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...CAAGGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 2 (lower is better)
Translates to: QRVSSLGHILRQTKIHLLLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...CAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GGGGTTCTCACCAAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: GVLTKNRRTIRIWITWVLLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...GAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTTGGTGAGAACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp GTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: VSLSNFLDIALHVGTKEAYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...GGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: PGHCVACWYQRSQFIYKTYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...AGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: LDIALHVGTKEANSSIKLYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: PGHCVACWYQRSQFIYKTSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 2 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEEVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTTGGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 2 (lower is better)
Translates to: RTLAKTTVLVETIYSTSLDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...CAAGGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 2 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: QRVSSLGHILRQTKIHLLVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...CAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AAAATAGCTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: KIAVALWSTKTNFPSIACMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...GCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GTCAAACAAACTCTGACCAATCAGATCATTCTGGCTGTAGTTGAGGATCTTGAAGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: VKQTLTNQIILAVVEDLEGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...TTCAAGATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTGTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGACTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 2 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRLCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCACTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 2 (lower is better)
Translates to: SETKSIFPRSHPTTNKNPLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...TGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CAGGTAGTCAAACAAACTCTGACCAATCAGATCATTCTGGCTGTAGTTGAGGATCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 2 (lower is better)
Translates to: QVVKQTLTNQIILAVVEDLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...ATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTGTTTGACTACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 2 (lower is better)
Translates to: LSNFLDIALHVGTKEANSSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...TGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 2 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 2 (lower is better)
Translates to: SRTLAKTTVLVETIYSTSNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...GGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ACTCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 2 (lower is better)
Translates to: TLRQRVSSLGHILRQTKISWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...GATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 2 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AAAATAGCTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 2 (lower is better)
Translates to: KIAVALWSTKTNFPSIACSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...GCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAATTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 2 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEEFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: WSLSIMSIPMWGFSPRIEVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...TTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCTCATCATTACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: PHHYWDYLILGRCQSCLYVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...GTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 2 (lower is better)
Translates to: CLKLHIVRLTCINGSEMALPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATaGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTA +
Preference number: 2 (lower is better)
Translates to: GAGLVPLCLKLHIVR*TCINGSEMAFMKSV
Trigger: TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 2 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATACATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: NFLDIALHVGTKEANSSIHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 2 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEESWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCATAGATGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: STKTNFPSIACRETYSIDDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...ATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 2 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLILCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: CLKLHIVRLTCINGSEMALYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 2 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 2 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR TCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 2 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGC +
Preference number: 3 (lower is better)
Translates to: ARVPPGIPGTVG*VLFGPPSPEGS
Trigger: GCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: ARVPPGIPGTVGWVLFGPPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...TGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: ESLEQWGGSSLGHLLQRARLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...TGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp TGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGG +
Preference number: 3 (lower is better)
Translates to: CDEAAEVTPLIV*FVVFIQPHLCG
Trigger: CCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCATGCACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 3 (lower is better)
Translates to: LEQWGGSSLGHLLQRAACTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...GCATGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 3 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 3 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 3 (lower is better)
Translates to: PEPGLIVGHWKECLESLHSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 72 bp GTCACTAAAGTCAACAGGGCCACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGATGACAGCCATTGCTGC +
Preference number: 3 (lower is better)
Translates to: VTKVNRATQSSI*FQEAHDDSHCC
Trigger: GCAGCAATGGCTGTCATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGTGGCCCTGTTGACTTTAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 3 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDEHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 72 bp ACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATTGCGACGAGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: TLISPFTGCGTT*ECSRPIATRQL
Trigger: CAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 3 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 3 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 3 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCCCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 3 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 3 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVASCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 72 bp CATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGTCTGGTTCGTTGTCTT +
Preference number: 3 (lower is better)
Translates to: HENAVVQLRRGS*GYTPHCLVRCL
Trigger: AAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 72 bp TGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTTACACCCCTCATTGTC +
Preference number: 3 (lower is better)
Translates to: WLWNYMRMQSSN*DEAAEVTPLIV
Trigger: GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp TGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGA +
Preference number: 3 (lower is better)
Translates to: CLVRCLHPAPSL*VASFSNSLCCG
Trigger: TCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 3 (lower is better)
Translates to: APSLWVASFSNSLCCGLCFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTTACCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: EPGLIVGHWKECLESLHLPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...TAAATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCCTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 3 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 3 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TGTAGTGTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 3 (lower is better)
Translates to: CSVYSGHGKSLKSTGPPSSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...ACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAACACTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 3 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDESLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 72 bp GATGTTCAATGGGCTGGAGCCACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGATTTCCATGATTTCCTC +
Preference number: 3 (lower is better)
Translates to: DVQWAGATARRR*PSYPVDFHDFL
Trigger: GAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGTGGCTCCAGCCCATTGAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp TGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGT +
Preference number: 3 (lower is better)
Translates to: WFVVFIQPHLCG*PAFQIACAVDC
Trigger: ACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTTAACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 3 (lower is better)
Translates to: EPGLIVGHWKECLESLHLTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...TAAATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGACTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 3 (lower is better)
Translates to: GVPPFKIFLPPGEEASGGLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...TCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCACATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 3 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCAGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 3 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCACCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEAPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGAGAATGCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 3 (lower is better)
Translates to: FPRSHPTTNKNPSAALRMLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...CATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp ATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACTATTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 3 (lower is better)
Translates to: IAVAKATCSVYSGHGKSLFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...TAGTGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 3 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp CATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAGTCGTCCAATTGCGAC +
Preference number: 3 (lower is better)
Translates to: HRFHPDFPVHWL*NYMRMQSSNCD
Trigger: GTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGAGAATGACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 3 (lower is better)
Translates to: FPRSHPTTNKNPSAALRMTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...CATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp ACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: TIAVAKATCSVYSGHGKSPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...TGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 3 (lower is better)
Translates to: DDPLILWISMISSAIIRPASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 3 (lower is better)
Translates to: KNRRTIRIWITWVLLSLASLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 3 (lower is better)
Translates to: VGSPPSRTLAKTTVLVETIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...TGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 72 bp GCAGGTAGAGGGGAAGTCCTTGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCATCCTACAGAAGAAAGA +
Preference number: 3 (lower is better)
Translates to: AGRGEVLVFNLY*RPVTLHPTEER
Trigger: TCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp ATTGCTGCCTCATCATTACTGGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCTATACCTATGTGGGGG +
Preference number: 3 (lower is better)
Translates to: IAASSLLGLLDP*SLSIMSIPMWG
Trigger: CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 3 (lower is better)
Translates to: YWDYLILGRCQSCLYLCGFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...CCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATGAGACCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: FHRFHPDFPVHWLWNYMRPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 3 (lower is better)
Translates to: KNRRTIRIWITWVLLSLAASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 3 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAATCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 3 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEESLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 72 bp GACAGCCATTGCTGCCTCATCATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAATCATGTCTATACCTAT +
Preference number: 3 (lower is better)
Translates to: DSHCCLIITGTT*SLVVVNHVYTY
Trigger: ATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAGCAATGGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 3 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AAAATAGCTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 3 (lower is better)
Translates to: KIAVALWSTKTNFPSIACHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...GCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp CTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 3 (lower is better)
Translates to: LRQRVSSLGHILRQTKIHASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...ATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATATCTGTTTTACGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: ERRAPEHNRDGPGVISVLRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...TAAAACAGATATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 3 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CCA 72 bp ATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGAATGCAGTCGTCCAAT +
Preference number: 3 (lower is better)
Translates to: IFHRFHPDFPVH*LWNYMRMQSSN
Trigger: ATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAATTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 3 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEEFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 3 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKSCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAACTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 3 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTACATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 3 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 3 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTAAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 3 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELSCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 3 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATCAACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 3 (lower is better)
Translates to: SIMSIPMWGFSPRIEELSTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...TGATAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR GCA 72 bp CTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTaGCGAGAAACATATTCCATAGATTTCACCCTGATT +
Preference number: 3 (lower is better)
Translates to: LWSTKTNFPSIA*RETYSIDFTLI
Trigger: AATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCCTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 3 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR TCA 72 bp TATGGATTGGTGGCACCTCTTAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACAGTAAGTTTATCTAAT +
Preference number: 3 (lower is better)
Translates to: YGLVAPLNVFMC*TAILSTVSLSN
Trigger: ATTAGATAAACTTACTGTGCTAAGGATGGCTGTTCAGCACATGAAAACATTAAGAGGTGCCACCAATCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR-3UTR CAA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 3 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: ARVPPGIPGTVGWVLFGPQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...TGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCAGCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PARVPPGIPGTVGWVLFGTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...CCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCACTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ESLEQWGGSSLGHLLQRALLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...TGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCAGCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: PARVPPGIPGTVGWVLFGTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...CCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PEPGLIVGHWKECLESLHGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: PEPGLIVGHWKECLESLHSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCCGGGGTGCGGTGTCAGAGGAGGAGAGCTGCTCCTTGACTTTGGCAATATCTAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SRGAVSEEESCSLTLAISSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...AGATATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGACACCGCACCCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVAGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: QSSNCDEAAEVTPLIVWFSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...GAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCATGCACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LEQWGGSSLGHLLQRAACTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...GCATGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTCCAGCAGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VYSGHGKSLKSTGPPSPAGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...TGCTGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGAGGAGGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SPVFASMSRSRGAVSEEEGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...CTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: APSLWVASFSNSLCCGLCSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGACCTCCAGCCATTGTaGTCCCCAAATTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRDLQPL*SPNSTC
Trigger: ACAGGTCGAATTTGGGGAGCACAATGGCTGGAGGTC...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CCA 90 bp GTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTCCAGCATCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VYSGHGKSLKSTGPPSPASPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...TGCTGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGATCGACTGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRSTGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCAGTCGA...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674108.1
CDS-3UTR TCA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDEELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LESLHLKSSCLLEKRHQGELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...CCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVAESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: APSLWVASFSNSLCCGLCSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLISPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCAGCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: PARVPPGIPGTVGWVLFGGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...CCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTAGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PPFKIFLPPGEEASGGGVGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...TACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCAACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ARVPPGIPGTVGWVLFGPTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...TGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: ASWRRGIRGRRTRDVQWALSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...AGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCATCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEASAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCACATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: ESLEQWGGSSLGHLLQRAHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...TGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLISPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGAGGAGACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: SPVFASMSRSRGAVSEEETRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...CTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: ASWRRGIRGRRTRDVQWALIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...AGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: SSNCDEAAEVTPLIVWFVLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...AACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGCTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCACTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LGLLDPWSLSIMSIPMWGSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: VGSPPSRTLAKTTVLVETESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...TGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: TGSPVFASMSRSRGAVSETRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...CTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCAGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: SLEQWGGSSLGHLLQRAAGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...TGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTAGTGTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTTTCCAAAAACCACAGTaGCCGGCACACAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: CSVYSGHGKSLKSTGPPSFQKPQ*PAHRKP
Trigger: GGGCTTCCTGTGTGCCGGGCACTGTGGTTTTTGGAA...ACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAACACTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673834.1
ENST00000673888.1
CDS-3UTR GCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCAGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVATQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: SRPIATRQLRLHPSLSGSPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...CGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGCTCCAGGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLKACYTSSYRRKNVVLQGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...CTGGAGCACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 72 bp CCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTT +
Preference number: 4 (lower is better)
Translates to: PIATRQLRLHPS*SGSLSSSSPIF
Trigger: AAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: PEPGLIVGHWKECLESLHCHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGTGGTCTGCCATTGGATaGTCTGAAGTCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TGSPVFASMSRSRGAVSEWSAIG*SEVTVL
Trigger: AAGAACTGTGACTTCAGATCATCCAATGGCAGACCA...CTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: TIAVAKATCSVYSGHGKSQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...TGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: KSIFPRSHPTTNKNPSAAQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...GGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGAGGAGTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: SPVFASMSRSRGAVSEEESCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...CTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGATTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCAAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PIATRQLRLHPSLSGSLSWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...AGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: VGSPPSRTLAKTTVLVETMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...TGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCAATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: SLEQWGGSSLGHLLQRAAIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...TGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LGLLDPWSLSIMSIPMWGWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SRPIATRQLRLHPSLSGSCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...CGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCACTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: ESLEQWGGSSLGHLLQRALLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...TGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: TGSPVFASMSRSRGAVSEDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...CTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPITRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTAAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PPFKIFLPPGEEASGGGVNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...TACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SSNCDEAAEVTPLIVWFVLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...AACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SNCDEAAEVTPLIVWFVVRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...GACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPIRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PEPGLIVGHWKECLESLHYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAAGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: TGSPVFASMSRSRGAVSEVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...CTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCCCGGGGTGCGGTGTCAGAGGAGGAGAGCTGCTCCTTGACTTTGGCAATATCTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: SRGAVSEEESCSLTLAISSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AGATATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGACACCGCACCCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTGGAGCCACAGCTATTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: EASGGGVLVMFNGLEPQLLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...TAGCTGTGGCTCCAGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: PEPGLIVGHWKECLESLHQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCCGTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PVHWLWNYMRMQSSNCDEWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...CTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTAGGGGCCTCTGGACTTaGTCACCTCAAAGCGATTTT +
Preference number: 4 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLIRGLWT*SPQSDF
Trigger: AAAATCGCTTTGAGGTGACCAAGTCCAGAGGCCCCT...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KSIFPRSHPTTNKNPSAATPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...GGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: APSLWVASFSNSLCCGLCCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLIPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: LESLEQWGGSSLGHLLQRIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...CCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: STFTEGLLHFILQKKERRGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...ACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: YRVPRNIFHRFHPDFPVHESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...GTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: STFTEGLLHFILQKKERRSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...ACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTAACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: PPFKIFLPPGEEASGGGVTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...TACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ASWRRGIRGRRTRDVQWARTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...AGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SRPIATRQLRLHPSLSGSLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...CGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTCCAGCACTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: VYSGHGKSLKSTGPPSPALPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...TGCTGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTAGTGAATGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: PPFKIFLPPGEEASGGGVVNGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCATTCAC...TACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000673626.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR TCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPICHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: SSNCDEAAEVTPLIVWFVGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...AACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVASCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: STFTEGLLHFILQKKERRGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...ACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCTCTTCCAAAAACCAATaGAGGCCCAGGATTCCACAT +
Preference number: 4 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSSSKNQ*RPRIPH
Trigger: ATGTGGAATCCTGGGCCTTCATTGGTTTTTGGAAGA...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000673626.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: DDPLILWISMISSAIIRPGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVAFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LDIALHVGTKEANSSIKLSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: PPFKIFLPPGEEASGGGVHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...TACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATGAGAACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FHRFHPDFPVHWLWNYMRTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AAGGTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: KVGSPPSRTLAKTTVLVECNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...CTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCACCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEAPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CAGGTAGTCAAACAAACTCTGACCAATCAGATCATTCTGGCTGTAGTTGAGGATTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QVVKQTLTNQIILAVVEDSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...ATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTGTTTGACTACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TPHCLVRCLHPAPSLWVADPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...GGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: PIATRQLRLHPSLSGSLSMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...AGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 72 bp CATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: HCLVRCLHPAPS*WVASFSNSLCC
Trigger: ACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAAGGCACCTCCGTCCCTaGCCTACTTTCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEERHLRP*PTFCLP
Trigger: GGGAAGGCAGAAAGTAGGTCAGGGACGGAGGTGCCT...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674108.1
CDS-3UTR TCA 90 bp AAGGTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGTGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: KVGSPPSRTLAKTTVLVECHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...CTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGTGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWCHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: QLRLHPSLSGSLSSSSPIVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...GATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: YWDYLILGRCQSCLYLCGLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...CCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PGHCVACWYQRSQFIYKTGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...AGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGCTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCGTTGGAGGGACACAGTaGGCGCCCACAGGCTCACGG +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSVGGTQ*APTGSR
Trigger: CCGTGAGCCTGTGGGCGCTCACTGTGTCCCTCCAAC...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403482.7
CDS-3UTR TCA 90 bp CGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGCCCAAATTCGACCTGTaGACTTCAGCAGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: RVPRNIFHRFHPDFPVHWPKFDL*TSAERT
Trigger: TGTCCTTTCTGCTGAAGTTCACAGGTCGAATTTGGG...CCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673834.1
CDS-3UTR GCA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: APSLWVASFSNSLCCGLCFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCTTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SLSNFLDIALHVGTKEANSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...ATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: YRVPRNIFHRFHPDFPVHNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...GTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGAGGCACCTCCGTCCCTaGCCTACTTTCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLRHLRP*PTFCLP
Trigger: GGGAAGGCAGAAAGTAGGTCAGGGACGGAGGTGCCT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTAGGCACCTCCGTCCCTaGCCTACTTTCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTRHLRP*PTFCLP
Trigger: GGGAAGGCAGAAAGTAGGTCAGGGACGGAGGTGCCT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000674108.1
CDS-3UTR TCA 90 bp GGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: GVPPFKIFLPPGEEASGGNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...TCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTAGTGTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: CSVYSGHGKSLKSTGPPSVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...ACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAACACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATATCTGTTTTAACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: ERRAPEHNRDGPGVISVLTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...TAAAACAGATATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCAATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTCTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCAGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SETKSIFPRSHPTTNKNPGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...TGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCATGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: TIAVAKATCSVYSGHGKSWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...TGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACACTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTT +
Preference number: 4 (lower is better)
Translates to: VGSPPSRTLAKTTVLVETLCCGL*RSFFDL
Trigger: AAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...TGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673892.1
CDS-3UTR GCA 90 bp CTGGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LESLHLKSSCLLEKRHQGFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...CCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTTATTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: EPGLIVGHWKECLESLHLLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...TAAATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMASAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGGACCTCCAGCCATTGTaGTCCCCAAATTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: QRVSSLGHILRQTKIHLLDLQPL*SPNSTC
Trigger: ACAGGTCGAATTTGGGGAGCACAATGGCTGGAGGTC...CAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CCA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GCCCCATCTTTGTGGGTGGCCAGCTTTTCAAATAGCCTGTGCTGTGGATTGTGCCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: APSLWVASFSNSLCCGLCLCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...GCACAATCCACAGCACAGGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LSFLGVLYILTFHEGHLCPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...ACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATACCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: NFLDIALHVGTKEANSSIPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMASPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGCTCCAGACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: LLKACYTSSYRRKNVVLQTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...CTGGAGCACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KNRRTIRIWITWVLLSLANLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCAATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEAMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTTCTCTGGTCTGCCATTaGATGATCACAGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSSLVCH*MITVPG
Trigger: GCCGGGCACTGTGATCATCCAATGGCAGACCAGAGA...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530357.6
CDS-3UTR TCA 90 bp TTTTTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTAGGCACCTCCGTCCCTaGCCTACTTTCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: FLSFLGVLYILTFHEGHLRHLRP*PTFCLP
Trigger: GGGAAGGCAGAAAGTAGGTCAGGGACGGAGGTGCCT...AAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529825.6
ENST00000674108.1
CDS-3UTR TCA 90 bp ACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAACAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: TVSLSNFLDIALHVGTKEQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEAVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAACTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: STVSLSNFLDIALHVGTKLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATACTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NFLDIALHVGTKEANSSILLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAAGCAATAAGGAAACGTaGGTCAGGCCTGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVSNKET*VRPAQN
Trigger: GTTCTGAGCAGGCCTGACTCACGTTTCCTTATTGCT...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524392.5
CDS-3UTR GCA 90 bp TACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: YWDYLILGRCQSCLYLCGLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...CCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: NLLASWRRGIRGRRTRDVSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...AACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: LESLHLKSSCLLEKRHQGFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...CCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLIFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: HLKSSCLLEKRHQGEAYSFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...CGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTTAATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: EPGLIVGHWKECLESLHLIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...TAAATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCATCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTTCGGCCTATTTTTCCTaGCCCAGCCCGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFSAYFS*PSPGSP
Trigger: GGGGGAACCCGGGCTGGGGCAGGAAAAATAGGCCGA...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCAACGTGAGTCAGGCCTaGTCAGAACTGTGCACCATT +
Preference number: 4 (lower is better)
Translates to: KNRRTIRIWITWVLLSLANVSQA*SELCTI
Trigger: AATGGTGCACAGTTCTGAGCAGGCCTGACTCACGTT...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524392.5
CDS-3UTR GCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAGACCTCCAGCCATTGTaGTCCCCAAATTCGACTGGT +
Preference number: 4 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRDLQPL*SPNSTG
Trigger: ACCAGTCGAATTTGGGGAGCACAATGGCTGGAGGTC...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674108.1
CDS-3UTR CCA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTAGGGGCCTCTGGACTTaGTCACCTCAAAGCGATTTT +
Preference number: 4 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFRGLWT*SPQSDF
Trigger: AAAATCGCTTTGAGGTGACCAAGTCCAGAGGCCCCT...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: NFLDIALHVGTKEANSSITPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAATGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: STVSLSNFLDIALHVGTKWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SRTLAKTTVLVETIYSTSWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...GGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: DDPLILWISMISSAIIRPTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATATCTGTTTTACCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: ERRAPEHNRDGPGVISVLPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...TAAAACAGATATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: PIATRQLRLHPSLSGSLSIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...AGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATGAGCTGTGGGAAGGTTaGGTCCCCGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYELWEG*VPAFQD
Trigger: GTCCTGGAAGGCGGGGACCCAACCTTCCCACAGCTC...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGGGGTGGGTCCTCTTTaGGCCACCTTCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVGVGPL*ATFSRG
Trigger: CCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCAGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LSNFLDIALHVGTKEANSESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...TGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: SRTLAKTTVLVETIYSTSESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...GGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMASPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTTTTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FLSFLGVLYILTFHEGHLSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...AAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTAGCCCGGGTTCCCCCTaGAATCCCTGGAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSSPGSP*NPWNSG
Trigger: CCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEADPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: STFTEGLLHFILQKKERRNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...ACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCAAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IATRQLRLHPSLSGSLSSRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...TGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GVPPFKIFLPPGEEASGGRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...TCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTGTGAATGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFVNGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCATTCAC...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR TCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTAGGCACCTCCGTCCCTaGCCTACTTTCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSRHLRP*PTFCLP
Trigger: GGGAAGGCAGAAAGTAGGTCAGGGACGGAGGTGCCT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000674108.1
CDS-3UTR TCA 90 bp TTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGAGAATGTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FPRSHPTTNKNPSAALRMYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...CATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGAGAATGAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: FPRSHPTTNKNPSAALRMNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...CATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAGTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYQFLHL*AAPGVR
Trigger: CCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: LGLLDPWSLSIMSIPMWGVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CAGAAGAAAGAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATAGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: QKKERRAPEHNRDGPGVIVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...TATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTCTTTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLILRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGCTCCAGGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: LLKACYTSSYRRKNVVLQGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...CTGGAGCACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHITARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTGGGGAGGCGTACTCGTaGTGTTCAATGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSGEAYS*CSMGWS
Trigger: GCTCCAGCCCATTGAACATCACGAGTACGCCTCCCC...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTTCCAAAAACCACAGTaGCCGGCACACAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCFQKPQ*PAHRKP
Trigger: GGGCTTCCTGTGTGCCGGGCACTGTGGTTTTTGGAA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
CDS-3UTR GCA 90 bp TTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATTCCAAAAACCACAGTaGCCGGCACACAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LSNFLDIALHVGTKEANSFQKPQ*PAHRKP
Trigger: GGGCTTCCTGTGTGCCGGGCACTGTGGTTTTTGGAA...TGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000482049.6
ENST00000673834.1
ENST00000673888.1
CDS-3UTR GCA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: LDIALHVGTKEANSSIKLSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AAGGTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: KVGSPPSRTLAKTTVLVESWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...CTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: KNRRTIRIWITWVLLSLASEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RVPRNIFHRFHPDFPVHWHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...CCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: KNRRTIRIWITWVLLSLAHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGGGTTCTCACCAAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: GVLTKNRRTIRIWITWVLTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...GAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTTGGTGAGAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAATGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TVSLSNFLDIALHVGTKEWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTTTTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FLSFLGVLYILTFHEGHLWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...AAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RVPRNIFHRFHPDFPVHWLCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...CCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGTAGTGTGATAAAAGAACCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: LVQGFMKLNHRLRSVIKEPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...TTCTTTTATCACACTACGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGGGTTCTCACCAAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GVLTKNRRTIRIWITWVLPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...GAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTTGGTGAGAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCATCTGCTGCCCTGAGAATGAGGTGTTTCAATTCATCGTCTGATAGAAAAGTTCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: PSAALRMRCFNSSSDRKVPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...AACTTTTCTATCAGACGATGAATTGAAACACCTCATTCTCAGGGCAGCAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: HLKSSCLLEKRHQGEAYSIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...CGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLIIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCACCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMPGTVG*VLFGPP
Trigger: AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCATCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTTCCCCCTGGAATCCCTaGAACAGTGGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFSPWNP*NSGVGP
Trigger: AGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGA...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCGATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GDDPLILWISMISSAIIRDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...CCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATCGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTTCACTGGTTGTGGAACTACATGAGAATGCAGTCGTCCAATTGCGACGAGGCAATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: VHWLWNYMRMQSSNCDEAMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...TGCCTCGTCGCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: LGLLDPWSLSIMSIPMWGGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CAGAAGAAAGAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATAGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: QKKERRAPEHNRDGPGVIGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...TATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTCTTTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGAGAATGGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: FPRSHPTTNKNPSAALRMGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...CATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCAATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: TIAVAKATCSVYSGHGKSMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...TGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: DDPLILWISMISSAIIRPMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGTGAATGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: WSLSIMSIPMWGFSPRIEVNGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCATTCAC...TTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000673626.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CCA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTTCTCTGGTCTGCCATTaGATGATCAATGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFSLVCH*MINEGP
Trigger: TGGGCCTTCATTGATCATCCAATGGCAGACCAGAGA...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000529825.6
CDS-3UTR CCA 90 bp AAAATAGCTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCTTTCCTGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: KIAVALWSTKTNFPSIACFPGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCAGGAAA...GCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673834.1
3UTR CAA 72 bp GCCTCATCATTACTGGGACTACTTGATCCTTGGTCGTaGTCAATCATGTCTATACCTATGTGGGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: ASSLLGLLDPWS*SIMSIPMWGFS
Trigger: TGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 72 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATGCAGTCGTCCAATTGC +
Preference number: 4 (lower is better)
Translates to: FHRFHPDFPVHW*WNYMRMQSSNC
Trigger: GCAATTGGACGACTGCATTCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMALRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACTAATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: IAVAKATCSVYSGHGKSLITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...TAGTGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAAATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: LLPSGLQKQTFHLSRAEKITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...TTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATATCTGTTTTAATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: ERRAPEHNRDGPGVISVLITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...TAAAACAGATATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CAGAAGAAAGAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATAACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QKKERRAPEHNRDGPGVITSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...TATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTCTTTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTAGTGGGCATCTaGCCTCCAGCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSLLVGI*PPAIVL
Trigger: GAGCACAATGGCTGGAGGTCAGATGCCCACTAGGAG...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000401424.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: LDIALHVGTKEANSSIKLLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: LSFLGVLYILTFHEGHLCSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...ACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGCTCCAGCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LLKACYTSSYRRKNVVLQQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...CTGGAGCACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLSNFLDIALHVGTKEANMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...ATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: LGLLDPWSLSIMSIPMWGFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAACATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: WSLSIMSIPMWGFSPRIEHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...TTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: TLRQRVSSLGHILRQTKIHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...GATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGACCTCCAGCCATTGTaGTCCCCAAATTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: STVSLSNFLDIALHVGTKDLQPL*SPNSTC
Trigger: ACAGGTCGAATTTGGGGAGCACAATGGCTGGAGGTC...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR GCA 90 bp TTTGGCAATATCTTTAGGATGCAGGTAGTCAAACAAACTCTGACCAATCAGATCGACCTCCAGCCATTGTaGTCCCCAAATTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: FGNIFRMQVVKQTLTNQIDLQPL*SPNSTC
Trigger: ACAGGTCGAATTTGGGGAGCACAATGGCTGGAGGTC...GATCTGATTGGTCAGAGTTTGTTTGACTACCTGCATCCTAAAGATATTGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATACCCCAGATCCAGCTTaGGAGGAGTTAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYTPDPA*EELGAS
Trigger: AGAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTGGTACCAAGAGAGCTaGAAAGCAGGTCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYWYQES*KAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGAATCCCTGGAACAGTaGGGTGGGTCCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSESLEQ*GGSSLG
Trigger: GCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAAGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLPSGLQKQTFHLSRAEKDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...TTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: YRVPRNIFHRFHPDFPVHDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...GTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: NKLSIYRVPRNIFHRFHPTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...AGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLINLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: NKLSIYRVPRNIFHRFHPRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...AGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: QRVSSLGHILRQTKIHLLLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...CAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCGTGAATGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: VSLSNFLDIALHVGTKEAVNGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCATTCAC...GGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATGACACACAAGGGGACTaGGGGTTGGAGGGACACAGT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYDTQGD*GLEGHS
Trigger: ACTGTGTCCCTCCAACCCCCAGTCCCCTTGTGTGTC...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000403482.7
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCGCCTTCCAGGACGTTaGCTCTGTGAACATCCCAGC +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMRLPGR*LCEHPS
Trigger: GCTGGGATGTTCACAGAGCCAACGTCCTGGAAGGCG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524392.5
CDS-3UTR TCA 90 bp GGGGTTCTCACCAAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCTGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: GVLTKNRRTIRIWITWVLCHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...GAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTTGGTGAGAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGTGGTCTGCCATTGGATaGTCTGAAGTCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPWSAIG*SEVTVL
Trigger: AAGAACTGTGACTTCAGATCATCCAATGGCAGACCA...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: YWDYLILGRCQSCLYLCGYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...CCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: KNRRTIRIWITWVLLSLANVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCATTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTTGCGACGAGGCAGCTaGGGTTACACCCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYLRRGS*GYTPHC
Trigger: ACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GATGACCCTCTTATCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: DDPLILWISMISSAIIRPTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGATAAGAGGGTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGAATCTAAGTTTCTaGTTCCCAGGCCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTWNLSF*FPGQAL
Trigger: GAGAGCCTGGCCTGGGAATCAGAAACTTAGATTCCA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673817.1
CDS-3UTR GCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGTTCCAAAAACCACAGTaGCCGGCACACAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMFQKPQ*PAHRKP
Trigger: GGGCTTCCTGTGTGCCGGGCACTGTGGTTTTTGGAA...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
CDS-3UTR GCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTTTCCAAAAACCACAGTaGCCGGCACACAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSFQKPQ*PAHRKP
Trigger: GGGCTTCCTGTGTGCCGGGCACTGTGGTTTTTGGAA...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
CDS-3UTR GCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLILSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: LSFLGVLYILTFHEGHLCLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...ACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: SLSNFLDIALHVGTKEANLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...ATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFGSQWS*LSVCGC
Trigger: GCAACCGCAAACGGAAAGGCAGCTCCACTGACTACC...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCATAGATTTCACATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KNKLSIYRVPRNIFHRFHMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...GTGAAATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: LDIALHVGTKEANSSIKLDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLITQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTAACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCGACCTCCAGCCATTGTaGTCCCCAAATTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSDLQPL*SPNSTC
Trigger: ACAGGTCGAATTTGGGGAGCACAATGGCTGGAGGTC...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000401424.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR GCA 90 bp TTTTTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTGACCTCCAGCCATTGTaGTCCCCAAATTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: FLSFLGVLYILTFHEGHLDLQPL*SPNSTC
Trigger: ACAGGTCGAATTTGGGGAGCACAATGGCTGGAGGTC...AAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR GCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGACTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 4 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRLCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTGTCCATTCTCTGGTCTaGCATTGGATGATCAATGAA +
Preference number: 4 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFVHSLV*HWMINE
Trigger: TTCATTGATCATCCAATGGCAGACCAGAGAATGGAC...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529825.6
CDS-3UTR GCA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTGTCCATTCTCTGGTCTaGCATTGGATGATCACAGTG +
Preference number: 4 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFVHSLV*HWMITV
Trigger: CACTGTGATCATCCAATGGCAGACCAGAGAATGGAC...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530357.6
CDS-3UTR CCA 90 bp CCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PGHCVACWYQRSQFIYKTCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...AGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: YWDYLILGRCQSCLYLCGHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...CCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTACATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: KSIFPRSHPTTNKNPSAALCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...GGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: SRTLAKTTVLVETIYSTSPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...GGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTACCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: VSLSNFLDIALHVGTKEATPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...GGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCAGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: SETKSIFPRSHPTTNKNPDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...TGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLITRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMANLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLILIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SRTLAKTTVLVETIYSTSLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...GGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATACTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: NFLDIALHVGTKEANSSILIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLSNFLDIALHVGTKEANRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...ATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAGTGAATGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: NFLDIALHVGTKEANSSIVNGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCATTCAC...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGTGCACCATTCAACTTaGCCAAGGTGTCCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMVHHST*PRCPVS
Trigger: GGACACCGGACACCTTGGCCAAGTTGAATGGTGCAC...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524392.5
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTGGGGTGGGTCCTCTTTaGGCCACCTACAACAAAGGA +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSGVGPL*ATYNKG
Trigger: TCCTTTGTTGTAGGTGGCCCAAAGAGGACCCACCCC...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673817.1
CDS-3UTR TCA 90 bp TTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGTAGTGTGATAAAAGAATATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LVQGFMKLNHRLRSVIKEYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...TTCTTTTATCACACTACGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCAAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: SETKSIFPRSHPTTNKNPNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...TGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: WSLSIMSIPMWGFSPRIEITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...TTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCAATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SETKSIFPRSHPTTNKNPITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...TGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: KNRRTIRIWITWVLLSLALYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCTCTTCCAAAAACCAATaGAGGCCCAGGATTCCACAT +
Preference number: 4 (lower is better)
Translates to: VSLSNFLDIALHVGTKEASSKNQ*RPRIPH
Trigger: ATGTGGAATCCTGGGCCTTCATTGGTTTTTGGAAGA...GGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000673626.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMALSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCATAGATTTCACCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: KNKLSIYRVPRNIFHRFHLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...GTGAAATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCAC +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMSCLSV*GCNPHH
Trigger: GTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCACAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SETKSIFPRSHPTTNKNPQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...TGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLISEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAATTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: WSLSIMSIPMWGFSPRIEFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...TTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTATGCAGTCGTCCAATTaGGACGAGGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSMQSSN*DEAAEV
Trigger: AACCTCAGCTGCCTCGTCGCAATTGGACGACTGCAT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTAGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTTGGCAATATCTTTAGGATGCAGGTAGTCAAACAAACTCTGACCAATCAGATCGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: FGNIFRMQVVKQTLTNQIDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...GATCTGATTGGTCAGAGTTTGTTTGACTACCTGCATCCTAAAGATATTGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMATQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTTGACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: RTLAKTTVLVETIYSTSLTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...CAAGGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTTGAGCAGAAAGGACATCTaGTGTAGGGGGTATACCTCC +
Preference number: 4 (lower is better)
Translates to: RTLAKTTVLVETIYSTSLSRKDI*CRGYTS
Trigger: GGAGGTATACCCCCTACAGCAGATGTCCTTTCTGCT...CAAGGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673834.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTAGGGGCCTCTGGACTTaGTCACCTCAAAGCGATTTT +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMARGLWT*SPQSDF
Trigger: AAAATCGCTTTGAGGTGACCAAGTCCAGAGGCCCCT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCAGGGGCCTCTGGACTTaGTCACCTCAAAGCGATTTT +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSRGLWT*SPQSDF
Trigger: AAAATCGCTTTGAGGTGACCAAGTCCAGAGGCCCCT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LSFLGVLYILTFHEGHLCCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...ACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTTCTTGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLFLGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCAAGAAA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673817.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTTTCTTGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTFLGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCAAGAAA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673817.1
CDS-3UTR CCA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACTAGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: IAVAKATCSVYSGHGKSLVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...TAGTGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATATCTGTTTTAGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: ERRAPEHNRDGPGVISVLVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...TAAAACAGATATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTAACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: SRTLAKTTVLVETIYSTSTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...GGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMATRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAAATCTTCTTGCCTCCTaGAGAAGAGGCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSNLLAS*RRGIRG
Trigger: CCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMALIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMARIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTTTTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: FLSFLGVLYILTFHEGHLRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...AAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATGAGAATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: FHRFHPDFPVHWLWNYMRMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: VSLSNFLDIALHVGTKEAMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...GGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGTGAATGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAVNGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCATTCAC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401424.6
ENST00000673626.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CCA 90 bp ACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAACAAGTTGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: TVSLSNFLDIALHVGTKEQVGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCAACTTG...TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482049.6
CDS-3UTR TCA 90 bp TTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: LSNFLDIALHVGTKEANSCHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...TGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTGGTCTGCCATTGGATaGTCTGAAGTCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCWSAIG*SEVTVL
Trigger: AAGAACTGTGACTTCAGATCATCCAATGGCAGACCA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTTGGTCTGCCATTGGATaGTCTGAAGTCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LSFLGVLYILTFHEGHLCWSAIG*SEVTVL
Trigger: AAGAACTGTGACTTCAGATCATCCAATGGCAGACCA...ACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCTGGTCTGCCATTGGATaGTCTGAAGTCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIWSAIG*SEVTVL
Trigger: AAGAACTGTGACTTCAGATCATCCAATGGCAGACCA...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATGGTCTGCCATTGGATaGTCTGAAGTCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELWSAIG*SEVTVL
Trigger: AAGAACTGTGACTTCAGATCATCCAATGGCAGACCA...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: NKLSIYRVPRNIFHRFHPYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...AGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: LSFLGVLYILTFHEGHLCGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...ACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATCAGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: SIMSIPMWGFSPRIEELSGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...TGATAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATACAGCTAGAAGGCGATaGCCCTCTTATCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYTARRR*PSYPVD
Trigger: ATCCACAGGATAAGAGGGTCATCGCCTTCTAGCTGT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTCTTCCAAAAACCAATaGAGGCCCAGGATTCCACAT +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTSSKNQ*RPRIPH
Trigger: ATGTGGAATCCTGGGCCTTCATTGGTTTTTGGAAGA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000401424.6
ENST00000403510.8
ENST00000673626.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCTCTTCCAAAAACCAATaGAGGCCCAGGATTCCACAT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLISSKNQ*RPRIPH
Trigger: ATGTGGAATCCTGGGCCTTCATTGGTTTTTGGAAGA...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401424.6
ENST00000403510.8
ENST00000673626.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGGAACCCATAATGACTaGGGAGTTACCAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSGTHND*GVTSRT
Trigger: GGTTCTGCTGGTAACTCCTCAGTCATTATGGGTTCC...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673817.1
CDS-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCACTTTCCGTTTGCGGTTaGAATCCACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSLSVCG*NPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAG...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGCTTTGTCTGTGTCCATaGTTTCTTGGTAGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLLCLCP*FLGSQW
Trigger: CCACTGACTACCAAGAAAGCATGGACACAGACAAAG...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673817.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCTTTGTCTGTGTCCATaGTTTCTTGGTAGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCLCLCP*FLGSQW
Trigger: CCACTGACTACCAAGAAAGCATGGACACAGACAAAG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673817.1
CDS-3UTR GCA 90 bp CCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: PGHCVACWYQRSQFIYKTQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...AGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTTTTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: FLSFLGVLYILTFHEGHLSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...AAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATGGAAGTCCAGTTTTTaGATCTATGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVWKSSF*IYEPLP
Trigger: CGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: STFTEGLLHFILQKKERRFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...ACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGATTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAACATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: WSLSIMSIPMWGFSPRIEHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...TTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTACCCAGTCCAGCATCTaGTTCCAAGAGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSTQSSI*FQEAHD
Trigger: ATCATGAGCCTCTTGGAAGCAGATGCTGGACTGGGT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTLCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATACTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 4 (lower is better)
Translates to: NFLDIALHVGTKEANSSILCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLILCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATATCCTGTCATCTCTCTaGAGACACACAAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYILSSL*RHTRGL
Trigger: CAGTCCCCTTGTGTGTCTGCAGAGAGATGACAGGAT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403482.7
CDS-3UTR GCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTGCCTGCTCAGAACTGTaGACCATTCAACTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFACSEL*TIQLGQ
Trigger: TTGGCCAAGTTGAATGGTGCACAGTTCTGAGCAGGC...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524392.5
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAAGGGGCCTCTGGACTTaGTCACCTCAAAGCGATTTT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSRGLWT*SPQSDF
Trigger: AAAATCGCTTTGAGGTGACCAAGTCCAGAGGCCCCT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMACNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHILCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCACCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCCCCATCTTTGTGGGTaGCCAGCTTTTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYPHLCG*PAFQIA
Trigger: GGCTATTTGAAAAGCTGGCCACCCACAAAGATGGGG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCCAGCCCCATCTTTGTaGGTGGCCAGCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMPAPSL*VASFSN
Trigger: ATTTGAAAAGCTGGCCACCCACAAAGATGGGGCTGG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMATPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTTGCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: RTLAKTTVLVETIYSTSLPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...CAAGGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATACTCGTGATGTTCAATaGGCTGGAGCCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYTRDVQ*AGATAR
Trigger: TCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCTGATAGTAGGCCACTaGAAGGAATGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMLIVGH*KECLES
Trigger: GGACTCCAGACATTCCTTCCAGTGGCCTACTATCAG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATAGAATATGGATAACCTaGGTTCTCCTGAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYRIWIT*VLLSLA
Trigger: GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCT...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTCATCATTACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: PHHYWDYLILGRCQSCLYMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...GTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATACTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: NFLDIALHVGTKEANSSILPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATCAATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: SIMSIPMWGFSPRIEELSMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...TGATAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSCHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTGGTCTGCCATTGGATaGTCTGAAGTCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAWSAIG*SEVTVL
Trigger: AAGAACTGTGACTTCAGATCATCCAATGGCAGACCA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAATATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: STVSLSNFLDIALHVGTKYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSFLGVLYILTFHEGHLCYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...ACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: FPGHCVACWYQRSQFIYKNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...TTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCATAGATGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: STKTNFPSIACRETYSIDGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...ATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: SRTLAKTTVLVETIYSTSSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...GGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCACTGTTTTCTTCTGCCTaGTCCTGTCATCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSLFSSA*SCHLSA
Trigger: TGCAGAGAGATGACAGGATCAGGCAGAAGAAAACAG...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403482.7
CDS-3UTR GCA 90 bp AATATATTCTACTTCCTTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: NIFYFLGPRVHETEPSTPSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...CGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTTCAGAGGAGGAGAGCTaGTCCTTGACTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSSEEES*SLTLAI
Trigger: TATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGA...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTT +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLLCCGL*RSFFDL
Trigger: AAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000673817.1
ENST00000673892.1
CDS-3UTR GCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAATTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: STVSLSNFLDIALHVGTKFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: STFTEGLLHFILQKKERRIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...ACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: VSLSNFLDIALHVGTKEAHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...GGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATGATGACAGCCATTGCTaGCTCATCATTACTGGGACT +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYDDSHC*LIITGT
Trigger: AGTCCCAGTAATGATGAGGCAGCAATGGCTGTCATC...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCATGATGACAGCCATTaGTGCCTCATCATTACTGGG +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSHDDSH*CLIITG
Trigger: CCCAGTAATGATGAGGCAGCAATGGCTGTCATCATG...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMALCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYCNPHH*YQESWK
Trigger: TTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTTTCTTGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYFLGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCAAGAAA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673817.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTTTTCTTGGTAGTCAGTaGAGCTGCCTTTCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSFLGSQ*SCLSVC
Trigger: GCAAACGGAAAGGCAGCTCCACTGACTACCAAGAAA...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673817.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAACATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: FPGHCVACWYQRSQFIYKHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...TTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAGAACGTCGTGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: STFTEGLLHFILQKKERRVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...ACGACGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LDIALHVGTKEANSSIKLLCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: VSLSNFLDIALHVGTKEALLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...GGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTACACCCCTCATTGTCTaGTTCGTTGTCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFTPLIV*FVVFIQ
Trigger: CTGGATGAAGACAACGAACCAGACAATGAGGGGTGT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCCCGTTCACTGGTTGTaGAACTACATGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYPVHWL*NYMRMQ
Trigger: CTGCATTCTCATGTAGTTCCACAACCAGTGAACGGG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMADFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATCAGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SIMSIPMWGFSPRIEELSDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...TGATAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: NKLSIYRVPRNIFHRFHPMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...AGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTTCTCTGGTCTGCCATTaGATGATCAATGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSSLVCH*MINEGP
Trigger: TGGGCCTTCATTGATCATCCAATGGCAGACCAGAGA...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529388.6
CDS-3UTR TCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVCHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCATGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSCHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTTGCCATTGGATGATCTaGAGTCACAGTTCTTACACC +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFCHWMI*SHSSYT
Trigger: GGTGTAAGAACTGTGACTTCAGATCATCCAATGGCA...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTGGTCTGCCATTGGATaGTCTGAAGTCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYWSAIG*SEVTVL
Trigger: AAGAACTGTGACTTCAGATCATCCAATGGCAGACCA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGGTTGTGGAACTACATaGGAATGCAGTCGTCCAATT +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMGCGTT*ECSRPI
Trigger: AATTGGACGACTGCATTCTCATGTAGTTCCACAACC...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMASCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATCATTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: SIMSIPMWGFSPRIEELSLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...TGATAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: SRTLAKTTVLVETIYSTSLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...GGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAATTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: FPGHCVACWYQRSQFIYKLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...TTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTTCTTCCAAAAACCAATaGAGGCCCAGGATTCCACAT +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSSSKNQ*RPRIPH
Trigger: ATGTGGAATCCTGGGCCTTCATTGGTTTTTGGAAGA...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401424.6
ENST00000403510.8
ENST00000673626.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCACTTTCACATAGTCAATaGAGGCCCAGGATTCCACAT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSLSHSQ*RPRIPH
Trigger: ATGTGGAATCCTGGGCCTTCATTGACTATGTGAAAG...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673817.1
CDS-3UTR GCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCTTTGTCTGTGTCCATaGTTTCTTGGTAGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYLCLCP*FLGSQW
Trigger: CCACTGACTACCAAGAAAGCATGGACACAGACAAAG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673817.1
CDS-3UTR GCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCTTTGTCTGTGTCCATaGTTTCTTGGTAGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMLCLCP*FLGSQW
Trigger: CCACTGACTACCAAGAAAGCATGGACACAGACAAAG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673817.1
CDS-3UTR GCA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: LDIALHVGTKEANSSIKLSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: VSLSNFLDIALHVGTKEASWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...GGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAATTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: FPGHCVACWYQRSQFIYKLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...TTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCACATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LSNFLDIALHVGTKEANSHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...TGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTCATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMLCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYLCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCACTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTG +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSLCCGL*RSFFDL
Trigger: CAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAACATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: TVSLSNFLDIALHVGTKEHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: PGHCVACWYQRSQFIYKTVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...AGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTLCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLLCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLILLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGATTTCCCCGTTCACTaGTTGTGGAACTACATGAGA +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSDFPVH*LWNYMR
Trigger: TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATC...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMADPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLSNFLDIALHVGTKEANRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...ATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FPGHCVACWYQRSQFIYKRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...TTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: NFLDIALHVGTKEANSSIMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCTGCCTCATCATTACTaGGACTACTTGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYLPHHY*DYLILG
Trigger: ACCAAGGATCAAGTAGTCCCAGTAATGATGAGGCAG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATATGATGAGGAAACACTaGAGCAGGCTTAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYMMRKH*SRLSST
Trigger: AGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 72 bp TCAATTCATCGTCTGATAGAAAAGTTGGTTTGTAGTTaGCTTCTGTGTATGGATTGGTGGCACCTCTTAATG +
Preference number: 4 (lower is better)
Translates to: SIHRLIEKLVCS*LLCMDWWHLLM
Trigger: CATTAAGAGGTGCCACCAATCCATACACAGAAGCAAACTACAAACCAACTTTTCTATCAGACGATGAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCATATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTATTCTAACCTTCCATaGGGGTCATCTTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYYSNLP*GSSLSV
Trigger: CACAGACAAAGATGACCCTCATGGAAGGTTAGAATA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATAATGTTTTCATGTGCTaGACAGCCATCCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYNVFMC*TAILST
Trigger: TGTGCTAAGGATGGCTGTTCAGCACATGAAAACATT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCAT +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVVFNLY*RPVTLH
Trigger: ATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGAC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCATCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTTCCTGTGGATTTCCATaGTTTCCTCAGCAATCATTC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSSCGFP*FPQQSF
Trigger: GAATGATTGCTGAGGAAATCATGGAAATCCACAGGA...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAATTACTGGGACTACTTaGTCCTTGGTCGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSITGTT*SLVVVN
Trigger: ATTGACAACGACCAAGGATCAAGTAGTCCCAGTAAT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMATSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAAAAATCCATCTGCTaGCCTGAGAATGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYQKSIC*PENEVF
Trigger: AAACACCTCATTCTCAGGGCAGCAGATGGATTTTTG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTCTGTGCTGTGGATTGTaGAGAAGCTTTTTCGATCTT +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFLCCGL*RSFFDL
Trigger: AAGATCGAAAAAGCTTCTGCACAATCCACAGCACAG...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000673817.1
ENST00000673892.1
CDS-3UTR GCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTTTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
38% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATTTTCAAATAGCCTGTaGTGTGGATTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVFSNSL*CGLCRS
Trigger: GCTTCTGCACAATCCACAGCACAGGCTATTTGAAAA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTAATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: LSIMSIPMWGFSPRIEELIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...TAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMALPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATATTGCTGTTTTCTTCTaGCTGATCCTGTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYIAVFF*LILSSL
Trigger: GAGAGATGACAGGATCAGGCAGAAGAAAACAGCAAT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403482.7
CDS-3UTR GCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTCCATTCTCTGGTCTaGCATTGGATGATCAATGAA +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSVHSLV*HWMINE
Trigger: TTCATTGATCATCCAATGGCAGACCAGAGAATGGAC...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529388.6
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCACATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCATTGCGTTGCATGTTaGTACCAAAGAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSHCVAC*YQRSQF
Trigger: GAATTGGCTTCTTTGGTACCAACATGCAACGCAATG...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: STVSLSNFLDIALHVGTKVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATGACCCTCTTATCCTGTaGATTTCCATGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYDPLIL*ISMISS
Trigger: TGAGGAAATCATGGAAATCCACAGGATAAGAGGGTC...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMARTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGGACTACTTGATCCTTaGTCGTTGTCAATCATGTCT +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVGLLDP*SLSIMS
Trigger: AGACATGATTGACAACGACCAAGGATCAAGTAGTCC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCCTGTATATTCTAACCTaGGGGGAGGAAAAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSLYILT*GEEKAK
Trigger: TTTTGCTTTTTCCTCCCCCCAGGTTAGAATATACAG...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000403482.7
3UTR CAA 72 bp ATGATGAGGAAACACTGGAGCAGGCTTAGTTCCACTTaGTCTGAAGTTACATATAGTAAGATTGACTTGTAT +
Preference number: 4 (lower is better)
Translates to: MMRKHWSRLSST*SEVTYSKIDLY
Trigger: ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGTGTTTCCTCATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 72 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAAGCCAATTCATCTATA +
Preference number: 4 (lower is better)
Translates to: STVSLSNFLDIA*HVGTKEANSSI
Trigger: TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTACCAGTAATGCACTTTaGTACTATAGCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFTSNAL*YYSCCQ
Trigger: TTGGCAACAGCTATAGTATCAAAGTGCATTACTGGT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR TCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTTGTATCAATGGCTCTaGGATGGCTTTTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYLYQWL*DGFYEV
Trigger: GACTTCATAAAAGCCATCTCAGAGCCATTGATACAA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTTTTCCATCTATCGCGTaGCGAGAAACATATTCCATA +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSFPSIA*RETYSI
Trigger: TATGGAATATGTTTCTCGGCACGCGATAGATGGAAA...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTTTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGTTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTTTGCCTATGACATTCTaGAAGATGTCCTATGTCATC +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSLPMTF*KMSYVI
Trigger: GATGACATAGGACATCTTGCAGAATGTCATAGGCAA...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCACATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATTTAAAATCTTCTTaGCTCCTGGAGAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVHLKSS*LLEKRH
Trigger: ATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFLCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCTGTGTATGGATTGGTaGCACCTCTTAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMLCMDW*HLLMFS
Trigger: TGAAAACATTAAGAGGTGCCACCAATCCATACACAG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCTTCTGTGTATGGATTaGTGGCACCTCTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYLLCMD*WHLLMF
Trigger: AAACATTAAGAGGTGCCACCAATCCATACACAGAAG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAAGAACTATCAGAATATaGATAACCTGGGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSRTIRI*ITWVLL
Trigger: CAGGAGAACCCAGGTTATCCATATTCTGATAGTTCT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATATGTCTATACCTATGTaGGGGTTCTCACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYMSIPM*GFSPRI
Trigger: TATTCTTGGTGAGAACCCCCACATAGGTATAGACAT...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCATTCTCTGGAGATGAATaGCAAAGTTACACATTGCTG +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSFSGDE*QSYTLL
Trigger: CAGCAATGTGTAACTTTGCCATTCATCTCCAGAGAA...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403482.7
CDS-3UTR GCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAAGTTGGTTTGTAGTTTaGTTCTGTGTATGGATTGGT +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVSWFVV*FCVWIG
Trigger: ACCAATCCATACACAGAAGCAAACTACAAACCAACT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR GCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAATTCATAACACGATGTaGCTAGAAGTTCTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVIHNTM*LEVLVV
Trigger: TACCACAAGAACTTCTAGGCACATCGTGTTATGAAT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGTTTATCTAATTTCCTaGACATTGCGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVVYLIS*TLRCML
Trigger: CAACATGCAACGCAATGTCCAGGAAATTAGATAAAC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CCA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAATAGCTGTTGCCCTCTaGTCTACAAAAACAAACTTT +
Preference number: 4 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVIAVAL*STKTNF
Trigger: AAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTAT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
3UTR CAA 72 bp TTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATaGACTTGTATCAATGGCTCTGAGATGGCTTTTATG +
Preference number: 4 (lower is better)
Translates to: LVPLCLKLHIVR*TCINGSEMAFM
Trigger: CATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTCACCCCAGATCCAGCTaGGGAGGAGTTAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: RVPPGIPGTVGWVLFGPPHPRSS*GGVRGL
Trigger: GAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGTG...AGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS CCA 90 bp CCTGATCCTGTCATCTCTCTGCAGACACACAAGGGGACTGGGGGTTaGAGGGACACAGTGAGCGCCCACAGGCTCACGGCCTCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: PDPVISLQTHKGTGG*RDTVSAHRLTASLL
Trigger: GAGCAAGGAGGCCGTGAGCCTGTGGGCGCTCACTGTGTCCCTCCAACCCCCAGTCCCCTTGTGTGTCTGCAGAGAGATGACAGGATCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403482.7
CDS CCA 90 bp AGTCAGTGGAGCTGCCTTTCCGTTTGCGGTTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAAGCAGGTCGGTGGGGCCCGGGGACA +
Preference number: 5 (lower is better)
Translates to: SQWSCLSVCGCNPHH*YQESWKAGRWGPGT
Trigger: TGTCCCCGGGCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000480685.5
ENST00000482049.6
ENST00000485918.2
ENST00000527998.5
ENST00000529388.6
ENST00000529825.6
ENST00000530357.6
ENST00000531665.5
ENST00000533520.5
ENST00000534544.5
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS CCA 90 bp CCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTaGGCCACCTACAACAAAGGAATCTTCTCCAGAGGGCAGCATGCT +
Preference number: 5 (lower is better)
Translates to: PGSPWNPWNSGVGPL*ATYNKGIFSRGQHA
Trigger: AGCATGCTGCCCTCTGGAGAAGATTCCTTTGTTGTAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673817.1
CDS-3UTR CAA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCCACCCCAGATCCAGCTaGGGAGGAGTTAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASHPRSS*GGVRGL
Trigger: GAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGTG...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGAGCTGCCTTTCCGTTaGCGGTTGCAATCCACACCA +
Preference number: 5 (lower is better)
Translates to: ESLEQWGGSSLGHLLQRAELPFR*RLQSTP
Trigger: TGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTC...TGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCAGCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PARVPPGIPGTVGWVLFGRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...CCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTGGAGCCACAGCTAGAGCTGCCTTTCCGTTaGCGGTTGCAATCCACACCA +
Preference number: 5 (lower is better)
Translates to: EASGGGVLVMFNGLEPQLELPFR*RLQSTP
Trigger: TGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTC...TAGCTGTGGCTCCAGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTTGTGCACCATTCAACTaGGCCAAGGTGTCCGGTGTC +
Preference number: 5 (lower is better)
Translates to: ASWRRGIRGRRTRDVQWACAPFN*AKVSGV
Trigger: GACACCGGACACCTTGGCCAAGTTGAATGGTGCACA...AGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524392.5
CDS-3UTR CAA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTCACCCCAGATCCAGCTaGGGAGGAGTTAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLIHPRSS*GGVRGL
Trigger: GAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGTG...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TCCCGGGGTGCGGTGTCAGAGGAGGAGAGCTGCTCCTTGACTTTGGCAATATCTGAGCTGCCTTTCCGTTaGCGGTTGCAATCCACACCA +
Preference number: 5 (lower is better)
Translates to: SRGAVSEEESCSLTLAISELPFR*RLQSTP
Trigger: TGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTC...AGATATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGACACCGCACCCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS GCA 90 bp CGACCTGTGAATGGTAGTCAGTGGAGCTGCCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: RPVNGSQWSCLSVCG*NPHHWYQESWKAGR
Trigger: CCGACCTGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCATTCACAGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000401424.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CAA 90 bp CTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGGGCAGCATGCAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 5 (lower is better)
Translates to: LEQWGGSSLGHLLQRAACSCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...GCATGCTGCCCTCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGGTGGCCAGCCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: PHCLVRCLHPAPSLWVASHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...GCTGGCCACCCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCTCTGACCTCCAGCCATaGTGCTCCCCAAATTCGACC +
Preference number: 5 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSSDLQP*CSPNST
Trigger: GGTCGAATTTGGGGAGCACAATGGCTGGAGGTCAGA...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS GCA 90 bp CCATGCTTTCTTGGTAGTCAGTGGAGCTGCCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: PCFLGSQWSCLSVCG*NPHHWYQESWKAGR
Trigger: CCGACCTGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAAGAAAGCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000480685.5
ENST00000527998.5
ENST00000529388.6
ENST00000533520.5
ENST00000534544.5
ENST00000673817.1
CDS GCA 90 bp AAAGGCCTTACTGGTAGTCAGTGGAGCTGCCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: KGLTGSQWSCLSVCG*NPHHWYQESWKAGR
Trigger: CCGACCTGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGTAAGGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485918.2
CDS GCA 90 bp TGCCCCAAAGGCCTTACTGGTAGTCAGTGGAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: CPKGLTGSQWSCLSV*GCNPHHWYQESWKA
Trigger: TGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGTAAGGCCTTTGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485918.2
CDS GCA 90 bp CACTTACTGAAGAGTAGACACCAGCCCCGCGGCAGCGCTCTCTGCTaGAAAAAGCTGTCTACGGAGCAAGACGGAAGGAAACAGTTACAG +
Preference number: 5 (lower is better)
Translates to: HLLKSRHQPRGSALC*KKLSTEQDGRKQLQ
Trigger: CTGTAACTGTTTCCTTCCGTCTTGCTCCGTAGACAGCTTTTTGCAGCAGAGAGCGCTGCCGCGGGGCTGGTGTCTACTCTTCAGTAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529050.5
ENST00000534544.5
CDS GCA 90 bp GACCACTTACTGAAGAGTAGACACCAGCCCCGCGGCAGCGCTCTCTaGTGCAAAAAGCTGTCTACGGAGCAAGACGGAAGGAAACAGTTA +
Preference number: 5 (lower is better)
Translates to: DHLLKSRHQPRGSAL*CKKLSTEQDGRKQL
Trigger: TAACTGTTTCCTTCCGTCTTGCTCCGTAGACAGCTTTTTGCAGCAGAGAGCGCTGCCGCGGGGCTGGTGTCTACTCTTCAGTAAGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529050.5
ENST00000534544.5
CDS GCA 90 bp CCAAATTCGACTGGTAGTCAGTGGAGCTGCCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: PNSTGSQWSCLSVCG*NPHHWYQESWKAGR
Trigger: CCGACCTGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGTCGAATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674108.1
CDS GCA 90 bp GGAGATTTTCCTGGTAGTCAGTGGAGCTGCCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: GDFPGSQWSCLSVCG*NPHHWYQESWKAGR
Trigger: CCGACCTGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGGAAAATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673834.1
CDS-3UTR CAA 90 bp AGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGCCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: SRPIATRQLRLHPSLSGSPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...CGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTGGGCCACCTTCTCCAGAGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: PWNPWNSGVGPLWATFSRASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...TCTGGAGAAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS GCA 90 bp AGTCAACAAGTTGGTAGTCAGTGGAGCTGCCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: SQQVGSQWSCLSVCG*NPHHWYQESWKAGR
Trigger: CCGACCTGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAACTTGTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482049.6
CDS GCA 90 bp AAGAGGAAGACATGCCCCAAAGGCCTTACTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGCAATCCACACCACTGGTACCAAGAG +
Preference number: 5 (lower is better)
Translates to: KRKTCPKGLTGSQWS*LSVCGCNPHHWYQE
Trigger: CTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGTAAGGCCTTTGGGGCATGTCTTCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485918.2
CDS GCA 90 bp GCCTGTTACACTTCATCTTTTTGCATCTATGAGCCGCTCCCGGGGTaGGGTGTCAGAGGAGGAGAGCTGCTCCTTGACTTTGGCAATATC +
Preference number: 5 (lower is better)
Translates to: ACYTSSFCIYEPLPG*GVRGGELLLDFGNI
Trigger: GATATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAAGATGAAGTGTAACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497429.5
CDS GCA 90 bp TGCTCCCCAAATTCGACTGGTAGTCAGTGGAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: CSPNSTGSQWSCLSV*GCNPHHWYQESWKA
Trigger: TGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGTCGAATTTGGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674108.1
CDS GCA 90 bp CTCCTCGGAGATTTTCCTGGTAGTCAGTGGAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: LLGDFPGSQWSCLSV*GCNPHHWYQESWKA
Trigger: TGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGGAAAATCTCCGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673834.1
CDS CCA 90 bp CAGCACCACGTTCTTTGCGTTCATCATGACCTCCAAGTGTCCCACTaGAGCTGTCATTCCCGTAGTTCCAAAGAGAATACTCGAGCGCGG +
Preference number: 5 (lower is better)
Translates to: QHHVLCVHHDLQVSH*SCHSRSSKENTRAR
Trigger: CCGCGCTCGAGTATTCTCTTTGGAACTACGGGAATGACAGCTCCAGTGGGACACTTGGAGGTCATGATGAACGCAAAGAACGTGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529050.5
ENST00000534544.5
CDS-3UTR CAA 90 bp AGTCCAGTTTTTGCATCTATGAGCCGCTCCCGGGGTGCGGTGTCAGAGGAGGAGGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: SPVFASMSRSRGAVSEEEASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...CTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCATCTTTGTGGCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: GYTPHCLVRCLHPAPSLWHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...CCACAAAGATGGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGTCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: NLGSPEPGLIVGHWKECLSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...CAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACATCTGACCTCCAGCCATaGTGCTCCCCAAATTCGACC +
Preference number: 5 (lower is better)
Translates to: VGSPPSRTLAKTTVLVETSDLQP*CSPNST
Trigger: GGTCGAATTTGGGGAGCACAATGGCTGGAGGTCAGA...TGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS GCA 90 bp CTGTGTCCATGCTTTCTTGGTAGTCAGTGGAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: LCPCFLGSQWSCLSV*GCNPHHWYQESWKA
Trigger: TGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAAGAAAGCATGGACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000480685.5
ENST00000527998.5
ENST00000529388.6
ENST00000533520.5
ENST00000534544.5
ENST00000673817.1
CDS-3UTR CAA 90 bp GTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTCCAGCAGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: VYSGHGKSLKSTGPPSPAAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...TGCTGGACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GTTGGGTCCCCGCCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACACCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: VGSPPSRTLAKTTVLVETPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...TGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: PPFKIFLPPGEEASGGGVPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...TACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTGGAGCCACAGCTAACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: EASGGGVLVMFNGLEPQLTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...TAGCTGTGGCTCCAGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTTATCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: EPGLIVGHWKECLESLHLSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...TAAATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATCCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: PEPGLIVGHWKECLESLHPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...ATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TCCCGGGGTGCGGTGTCAGAGGAGGAGAGCTGCTCCTTGACTTTGGCAATATCTCATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: SRGAVSEEESCSLTLAISHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...AGATATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGACACCGCACCCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS TCA 90 bp ACCACAGGACTCTCAGCTCCTACATGGATGAATGTAGCTTTTGGGTaGCCCAGAGACCACTCCTCCACCACCCAGAAGTCTTTTGGTTCT +
Preference number: 5 (lower is better)
Translates to: TTGLSAPTWMNVAFG*PRDHSSTTQKSFGS
Trigger: AGAACCAAAAGACTTCTGGGTGGTGGAGGAGTGGTCTCTGGGTCACCCAAAAGCTACATTCATCCATGTAGGAGCTGAGAGTCCTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS GCA 90 bp CAAATTCGACCTGTGAATGGTAGTCAGTGGAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: QIRPVNGSQWSCLSV*GCNPHHWYQESWKA
Trigger: TGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCATTCACAGGTCGAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000401424.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673888.1
ENST00000673892.1
CDS GCA 90 bp GTTCCATGCCCGAGAACTGACACCAAGTTTAACAAGAGGAAGACATaGCCCAAAGGCCTTACTGGTAGTCAGTGGAGCTGCCTTTCCGTT +
Preference number: 5 (lower is better)
Translates to: VPCPRTDTKFNKRKT*PKGLTGSQWSCLSV
Trigger: AACGGAAAGGCAGCTCCACTGACTACCAGTAAGGCCTTTGGGGCATGTCTTCCTCTTGTTAAACTTGGTGTCAGTTCTCGGGCATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485918.2
CDS GCA 90 bp TATATTCTAACTGGTAGTCAGTGGAGCTGCCTTTCCGTTTGCGGTTaGAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: YILTGSQWSCLSVCG*NPHHWYQESWKAGR
Trigger: CCGACCTGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGTTAGAATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531665.5
CDS CCA 90 bp TGTAACCACAGGACTCTCAGCTCCTACATGGATGAATGTAGCTTTTaGGTGACCCAGAGACCACTCCTCCACCACCCAGAAGTCTTTTGG +
Preference number: 5 (lower is better)
Translates to: CNHRTLSSYMDECSF*VTQRPLLHHPEVFW
Trigger: CCAAAAGACTTCTGGGTGGTGGAGGAGTGGTCTCTGGGTCACCCAAAAGCTACATTCATCCATGTAGGAGCTGAGAGTCCTGTGGTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CCA 90 bp AGGAAACGTGAGTCAGGCCTGCTCAGAACTGTGCACCATTCAACTTaGCCAAGGTGTCCGGTGTCCACTCTGGACAAAACAACAGTGTTA +
Preference number: 5 (lower is better)
Translates to: RKRESGLLRTVHHST*PRCPVSTLDKTTVL
Trigger: TAACACTGTTGTTTTGTCCAGAGTGGACACCGGACACCTTGGCCAAGTTGAATGGTGCACAGTTCTGAGCAGGCCTGACTCACGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524392.5
CDS-3UTR CAA 90 bp AGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: RMQSSNCDEAAEVTPLIVAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...GACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCTTCTCTGGTCTGCCATaGGATGATCTGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: TRQLRLHPSLSGSLSSSSFSGLP*DDLKSQ
Trigger: CTGTGACTTCAGATCATCCAATGGCAGACCAGAGAA...GCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 5 (lower is better)
Translates to: QSSNCDEAAEVTPLIVWFLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...GAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGAGAATGCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: FPRSHPTTNKNPSAALRMHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...CATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS GCA 90 bp ACGAAAAGTCAACAAGTTGGTAGTCAGTGGAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: TKSQQVGSQWSCLSV*GCNPHHWYQESWKA
Trigger: TGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAACTTGTTGACTTTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482049.6
CDS-3UTR CAA 90 bp AAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCGAGCTGCCTTTCCGTTaGCGGTTGCAATCCACACCA +
Preference number: 5 (lower is better)
Translates to: KSIFPRSHPTTNKNPSAAELPFR*RLQSTP
Trigger: TGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTC...GGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: SNCDEAAEVTPLIVWFVVASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...GACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TCCCGGGGTGCGGTGTCAGAGGAGGAGAGCTGCTCCTTGACTTTGGCAATATCTCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: SRGAVSEEESCSLTLAISRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...AGATATTGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGACACCGCACCCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTGGAGCCACAGCTAATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: EASGGGVLVMFNGLEPQLIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...TAGCTGTGGCTCCAGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GCCTCCTGGAGAAGAGGCATCAGGGGGAGGCGTACTCGTGATGTTCAATGGGCTATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: ASWRRGIRGRRTRDVQWAIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...AGCCCATTGAACATCACGAGTACGCCTCCCCCTGATGCCTCTTCTCCAGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: DNLGSPEPGLIVGHWKECPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...ACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCAGCCCCCTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 5 (lower is better)
Translates to: RQLRLHPSLSGSLSSSSPLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...GGGGCTGGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS GCA 90 bp CCTGTGAATCAAACGAAAAGTCAACAAGTTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGCAATCCACACCACTGGTACCAAGAG +
Preference number: 5 (lower is better)
Translates to: PVNQTKSQQVGSQWS*LSVCGCNPHHWYQE
Trigger: CTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAACTTGTTGACTTTTCGTTTGATTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482049.6
CDS GCA 90 bp GTTCTGTATATTCTAACTGGTAGTCAGTGGAGCTGCCTTTCCGTTTaGGGTTGCAATCCACACCACTGGTACCAAGAGAGCTGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: VLYILTGSQWSCLSV*GCNPHHWYQESWKA
Trigger: TGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGTTAGAATATACAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531665.5
CDS-3UTR CAA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGCACCCCAGATCCAGCTaGGGAGGAGTTAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLHPRSS*GGVRGL
Trigger: GAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGTG...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTCACCCCAGATCCAGCTaGGGAGGAGTTAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTHPRSS*GGVRGL
Trigger: GAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGTG...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCACACCCCAGATCCAGCTaGGGAGGAGTTAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LSNFLDIALHVGTKEANSHPRSS*GGVRGL
Trigger: GAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGTG...TGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: LLPSGLQKQTFHLSRAEKPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...TTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLIFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATGAGAATGCAGTCGTCCAATTGCGACGAGGCAGCTGAGGTTACACCCCTCATTCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 5 (lower is better)
Translates to: MRMQSSNCDEAAEVTPLILISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...AATGAGGGGTGTAACCTCAGCTGCCTCGTCGCAATTGGACGACTGCATTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GCGACGAGGCAGCTGAGGTTACACCCCTCATTGTCTGGTTCGTTGTCTTCATCCCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: ATRQLRLHPSLSGSLSSSRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...GGATGAAGACAACGAACCAGACAATGAGGGGTGTAACCTCAGCTGCCTCGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CAGAAGAAAGAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATATCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: QKKERRAPEHNRDGPGVISLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...TATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTCTTTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGACCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: GVPPFKIFLPPGEEASGGPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...TCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GAGCCTGGCCTGATAGTAGGCCACTGGAAGGAATGTCTGGAGTCCCTCCATTTACTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 5 (lower is better)
Translates to: EPGLIVGHWKECLESLHLLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...TAAATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTATCAGGCCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTTTCTCTGGTCTGCCATaGGATGATCACAGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFFSGLP*DDHSAR
Trigger: CCGGGCACTGTGATCATCCAATGGCAGACCAGAGAA...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000530357.6
CDS TCA 90 bp CGTACTCGTGATGTTCAATGGGCTGGAGCCACAGCTAGAAGGCGATaGCCCTCTTATCCTGTCAGAAAAGAGAATTACACTGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: RTRDVQWAGATARRR*PSYPVRKENYTAFS
Trigger: AGAAAAGGCAGTGTAATTCTCTTTTCTGACAGGATAAGAGGGTCATCGCCTTCTAGCTGTGGCTCCAGCCCATTGAACATCACGAGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CCA 90 bp ATTCGACCTGTGAATCAAACGAAAAGTCAACAAGTTGGTAGTCAGTaGAGCTGCCTTTCCGTTTGCGGTTGCAATCCACACCACTGGTAC +
Preference number: 5 (lower is better)
Translates to: IRPVNQTKSQQVGSQ*SCLSVCGCNPHHWY
Trigger: GTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAACTTGTTGACTTTTCGTTTGATTCACAGGTCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482049.6
CDS-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCACCCCAGATCCAGCTaGGGAGGAGTTAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAHPRSS*GGVRGL
Trigger: GAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGTG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTTGCACCCCAGATCCAGCTaGGGAGGAGTTAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: RTLAKTTVLVETIYSTSLHPRSS*GGVRGL
Trigger: GAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGTG...CAAGGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTAGTGTTTACAGCGGCCATGGCAAGTCACTAAAGTCAACAGGGCCACCCAGTACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: CSVYSGHGKSLKSTGPPSTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...ACTGGGTGGCCCTGTTGACTTTAGTGACTTGCCATGGCCGCTGTAAACACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGTCCCTCCATTTAAAATCTTCTTGCCTCCTGGAGAAGAGGCATCAGGGGGACTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 5 (lower is better)
Translates to: GVPPFKIFLPPGEEASGGLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...TCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAATCTGACCTCCAGCCATaGTGCTCCCCAAATTCGACC +
Preference number: 5 (lower is better)
Translates to: WSLSIMSIPMWGFSPRIESDLQP*CSPNST
Trigger: GGTCGAATTTGGGGAGCACAATGGCTGGAGGTCAGA...TTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS GCA 90 bp TTTATAATTTCTTTTCAGGCGGTCAGCTTCTTCCAAAAACCACAGTaGCCGGCACACAGGAAGCCCTCTAGCGTAGATTCCTATGACATC +
Preference number: 5 (lower is better)
Translates to: FIISFQAVSFFQKPQ*PAHRKPSSVDSYDI
Trigger: GATGTCATAGGAATCTACGCTAGAGGGCTTCCTGTGTGCCGGGCACTGTGGTTTTTGGAAGAAGCTGACCGCCTGAAAAGAAATTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000482049.6
ENST00000527998.5
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
CDS CCA 90 bp AGCCCTGGCTTTTCTAGAGGGAACATCCACTCTTATTGCAAACCCTaGCTAAGGCCAAGTTCAAATCTTTCCTCTTTTGCTTGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SPGFSRGNIHSYCKP*LRPSSNLSSFACFG
Trigger: GCCAAAGCAAGCAAAAGAGGAAAGATTTGAACTTGGCCTTAGCCAGGGTTTGCAATAAGAGTGGATGTTCCCTCTAGAAAAGCCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS-3UTR CAA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCACCCCAGATCCAGCTaGGGAGGAGTTAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYHPRSS*GGVRGL
Trigger: GAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGTG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCACACCCCAGATCCAGCTaGGGAGGAGTTAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSHPRSS*GGVRGL
Trigger: GAGGCCCCTAACTCCTCCCAAGCTGGATCTGGGGTG...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCACCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: SETKSIFPRSHPTTNKNPPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...TGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGGAGCTGCCTTTCCGTTaGCGGTTGCAATCCACACCA +
Preference number: 5 (lower is better)
Translates to: LDIALHVGTKEANSSIKLELPFR*RLQSTP
Trigger: TGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTC...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTGAGCTGCCTTTCCGTTaGCGGTTGCAATCCACACCA +
Preference number: 5 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFELPFR*RLQSTP
Trigger: TGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTC...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCGAGCTGCCTTTCCGTTaGCGGTTGCAATCCACACCA +
Preference number: 5 (lower is better)
Translates to: VSLSNFLDIALHVGTKEAELPFR*RLQSTP
Trigger: TGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTC...GGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGAGAATGTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: FPRSHPTTNKNPSAALRMFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...CATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CAGAAGAAAGAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATAGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: QKKERRAPEHNRDGPGVIVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...TATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTCTTTCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGGGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: LGLLDPWSLSIMSIPMWGVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...CCCCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCCCTGAGAATGCATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: FPRSHPTTNKNPSAALRMHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...CATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTTCTGACCTCCAGCCATaGTGCTCCCCAAATTCGACC +
Preference number: 5 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFSDLQP*CSPNST
Trigger: GGTCGAATTTGGGGAGCACAATGGCTGGAGGTCAGA...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CAA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGTCTGACCTCCAGCCATaGTGCTCCCCAAATTCGACC +
Preference number: 5 (lower is better)
Translates to: LDIALHVGTKEANSSIKLSDLQP*CSPNST
Trigger: GGTCGAATTTGGGGAGCACAATGGCTGGAGGTCAGA...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS TCA 90 bp TTTCTCTTTTGGCAGTGTCATCTCTGTAGGATAAGGCCTCATTCCTaGGTTGTCAAACATGCCCACCTTCATCTCTCCCTATTCCAATGC +
Preference number: 5 (lower is better)
Translates to: FLFWQCHLCRIRPHS*VVKHAHLHLSLFQC
Trigger: GCATTGGAATAGGGAGAGATGAAGGTGGGCATGTTTGACAACTCAGGAATGAGGCCTTATCCTACAGAGATGACACTGCCAAAAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS-3UTR CAA 90 bp TACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACCTATGTGGGGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: YWDYLILGRCQSCLYLCGAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...CCCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTCCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: PGHCVACWYQRSQFIYKTPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...AGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTCCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGAGCTGCCTTTCCGTTaGCGGTTGCAATCCACACCA +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCELPFR*RLQSTP
Trigger: TGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATACATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: NFLDIALHVGTKEANSSIHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCTCATCATTACTGGGACTACTTGATCCTTGGTCGTTGTCAATCATGTCTATACTCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: PHHYWDYLILGRCQSCLYSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...GTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCAGTAATGATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AAAATAGCTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCTCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: KIAVALWSTKTNFPSIACSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...GCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATGAGAAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FHRFHPDFPVHWLWNYMRRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTGATTTCCCCGTTCACCCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: YRVPRNIFHRFHPDFPVHPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...GTGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTCTGACCTCCAGCCATaGTGCTCCCCAAATTCGACC +
Preference number: 5 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTSDLQP*CSPNST
Trigger: GGTCGAATTTGGGGAGCACAATGGCTGGAGGTCAGA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401424.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CAA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAATCTGACCTCCAGCCATaGTGCTCCCCAAATTCGACC +
Preference number: 5 (lower is better)
Translates to: STVSLSNFLDIALHVGTKSDLQP*CSPNST
Trigger: GGTCGAATTTGGGGAGCACAATGGCTGGAGGTCAGA...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTCTGACCTCCAGCCATaGTGCTCCCCAAATTCGACC +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCSDLQP*CSPNST
Trigger: GGTCGAATTTGGGGAGCACAATGGCTGGAGGTCAGA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401424.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
CDS GCA 90 bp GGGTTGAGAACCACTGGTTTAACAGAGGAACTAGAAGGTGTTACTTaGCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTATT +
Preference number: 5 (lower is better)
Translates to: GLRTTGLTEELEGVT*LWISMISSAIIRPI
Trigger: AATAGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGCAAGTAACACCTTCTAGTTCCTCTGTTAAACCAGTGGTTCTCAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS GCA 90 bp TGCAAACCCTGGCTAAGGCCAAGTTCAAATCTTTCCTCTTTTGCTTaGTTTGGCCCATGCACCCTCCCTTTTTCCTGTTATCATAAAGAA +
Preference number: 5 (lower is better)
Translates to: CKPWLRPSSNLSSFA*FGPCTLPFSCYHKE
Trigger: TTCTTTATGATAACAGGAAAAAGGGAGGGTGCATGGGCCAAAGCAAGCAAAAGAGGAAAGATTTGAACTTGGCCTTAGCCAGGGTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS GCA 90 bp CTCAAGAATAGCCCTGGCTTTTCTAGAGGGAACATCCACTCTTATTaGAAACCCTGGCTAAGGCCAAGTTCAAATCTTTCCTCTTTTGCT +
Preference number: 5 (lower is better)
Translates to: LKNSPGFSRGNIHSY*KPWLRPSSNLSSFA
Trigger: AGCAAAAGAGGAAAGATTTGAACTTGGCCTTAGCCAGGGTTTGCAATAAGAGTGGATGTTCCCTCTAGAAAAGCCAGGGCTATTCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CCA 90 bp ATGCAGTCCCTAGAGTCAAGCATCTCACTGACAAAGCCCTTGGATTaGAGTTTGCATTCAGTTGGTGAATTTCAAGTAAGTGGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: MQSLESSISLTKPLD*SLHSVGEFQVSGQF
Trigger: AAACTGGCCACTTACTTGAAATTCACCAACTGAATGCAAACTCCAATCCAAGGGCTTTGTCAGTGAGATGCTTGACTCTAGGGACTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS-3UTR CAA 90 bp TCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCAGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: SETKSIFPRSHPTTNKNPAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...TGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGCCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGAGCTGCCTTTCCGTTaGCGGTTGCAATCCACACCA +
Preference number: 5 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAELPFR*RLQSTP
Trigger: TGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTGTGTCCATGCTTTCTaGGTAGTCAGTGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCCVHAF*VVSGAA
Trigger: GGCAGCTCCACTGACTACCAAGAAAGCATGGACACA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673817.1
CDS-3UTR CAA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 5 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATTTTATCCCGACGCCGCTTTTCAATCTGACTGTGAGCTTCCCTTGCATTTTTGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: HFIPTPLFNLTVSFPCIFASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...AAAAATGCAAGGGAAGCTCACAGTCAGATTGAAAAGCGGCGTCGGGATAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATGAGAAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 5 (lower is better)
Translates to: FHRFHPDFPVHWLWNYMRSCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: KNRRTIRIWITWVLLSLAVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...GGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGGGTTCTCACCAAGAATAGAAGAACTATCAGAATATGGATAACCTGGGTTCTCAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: GVLTKNRRTIRIWITWVLSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...GAGAACCCAGGTTATCCATATTCTGATAGTTCTTCTATTCTTGGTGAGAACCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCAAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: SETKSIFPRSHPTTNKNPSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...TGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GTCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: VVVNHVYTYVGVLTKNRRSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...TCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTGGTCCAAGGGTTCATGAAACTGAACCATCGACTCCGTAGTGTGATAAAAGAAAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: LVQGFMKLNHRLRSVIKESLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...TTCTTTTATCACACTACGGAGTCGATGGTTCAGTTTCATGAACCCTTGGACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 5 (lower is better)
Translates to: LRQRVSSLGHILRQTKIHFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...ATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 5 (lower is better)
Translates to: TLRQRVSSLGHILRQTKIFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...GATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GAACGTCGTGCTCCAGAACATAATCGAGATGGCCCAGGGGTTATATCTGTTTTACTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 5 (lower is better)
Translates to: ERRAPEHNRDGPGVISVLLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...TAAAACAGATATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGACGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AAGAACTATCAGAATATGGATAACCTGGGTTCTCCTGAGCCTGGCCTGATAGTACATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: KNYQNMDNLGSPEPGLIVHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...TACTATCAGGCCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATCATCTGACCTCCAGCCATaGTGCTCCCCAAATTCGACT +
Preference number: 5 (lower is better)
Translates to: SIMSIPMWGFSPRIEELSSDLQP*CSPNST
Trigger: AGTCGAATTTGGGGAGCACAATGGCTGGAGGTCAGA...TGATAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674108.1
CDS CCA 90 bp TCTCCCTATTCCAATGCAACTTCCACAAAGCGTAACACAAGACTTTaGATGCTTGTTCAGCATCCTACAACAAATGGGGTCTTACAGGTT +
Preference number: 5 (lower is better)
Translates to: SPYSNATSTKRNTRL*MLVQHPTTNGVLQV
Trigger: AACCTGTAAGACCCCATTTGTTGTAGGATGCTGAACAAGCATCCAAAGTCTTGTGTTACGCTTTGTGGAAGTTGCATTGGAATAGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS-3UTR CAA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: LDIALHVGTKEANSSIKLAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000482049.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: PGHCVACWYQRSQFIYKTAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...AGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCTTCTCTGGTCTGCCATaGGATGATCTGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: VSLSNFLDIALHVGTKEAFSGLP*DDLKSQ
Trigger: CTGTGACTTCAGATCATCCAATGGCAGACCAGAGAA...GGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTTTCTCTGGTCTGCCATaGGATGATCTGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: VLYILTFHEGHLCLCPCFFSGLP*DDLKSQ
Trigger: CTGTGACTTCAGATCATCCAATGGCAGACCAGAGAA...AAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCCCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTTGCCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: RTLAKTTVLVETIYSTSLPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...CAAGGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTGAGCTGCCTTTCCGTTaGCGGTTGCAATCCACACCA +
Preference number: 5 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSELPFR*RLQSTP
Trigger: TGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTC...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGAGCTGCCTTTCCGTTaGCGGTTGCAATCCACACCA +
Preference number: 5 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSELPFR*RLQSTP
Trigger: TGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTC...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGAGCTGCCTTTCCGTTaGCGGTTGCAATCCACACCA +
Preference number: 5 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVELPFR*RLQSTP
Trigger: TGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTGTGTCCATGCTTTCTaGGTAGTCAGTGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSCVHAF*VVSGAA
Trigger: GGCAGCTCCACTGACTACCAAGAAAGCATGGACACA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673817.1
CDS-3UTR CAA 90 bp CAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: QRVSSLGHILRQTKIHLLTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...CAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTCTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: TLRQRVSSLGHILRQTKIFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...GATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATGGCAAGTCACGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: TIAVAKATCSVYSGHGKSRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...TGACTTGCCATGGCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCATCTGCTGCCCTGAGAATGAGGTGTTTCAATTCATCGTCTGATAGAAAAGTTGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: PSAALRMRCFNSSSDRKVVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...AACTTTTCTATCAGACGATGAATTGAAACACCTCATTCTCAGGGCAGCAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCATCCAGCCCCATCTTaGTGGGTGGCCAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYHPAPS*WVASFS
Trigger: TGAAAAGCTGGCCACCCACAAAGATGGGGCTGGATG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACTATCATCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: SIMSIPMWGFSPRIEELSSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...TGATAGTTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TCCTTGTCTTCAACCTTTACTGAAGGCCTGTTACACTTCATCCTACAGAAGAAAAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SLSSTFTEGLLHFILQKKRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...TTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GTCAAACAAACTCTGACCAATCAGATCATTCTGGCTGTAGTTGAGGATCTTGAATTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 5 (lower is better)
Translates to: VKQTLTNQIILAVVEDLEFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...TTCAAGATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTGTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: LRQRVSSLGHILRQTKIHPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...ATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATGCACTTTGATACTATAGCTGTTGCCAAAGCAACATGTAGTGTTTACAGCGGCCATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: MHFDTIAVAKATCSVYSGHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...GCCGCTGTAAACACTACATGTTGCTTTGGCAACAGCTATAGTATCAAAGTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTCGAAAAGTCAACAAGTaGGTAGTCAGTGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LSFLGVLYILTFHEGHLCRKVNK*VVSGAA
Trigger: GGCAGCTCCACTGACTACCAACTTGTTGACTTTTCG...ACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482049.6
CDS TCA 90 bp CATATGGAAAGGAAGTCTCTCCCAAGACAGCTAGTAATAACTAGCTaGTCTGCTTGGTTTCTAGTACTAATCCTGGGCAGCTCTTTGATT +
Preference number: 5 (lower is better)
Translates to: HMERKSLPRQLVITS*SAWFLVLILGSSLI
Trigger: AATCAAAGAGCTGCCCAGGATTAGTACTAGAAACCAAGCAGATCAGCTAGTTATTACTAGCTGTCTTGGGAGAGACTTCCTTTCCATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS GCA 90 bp CCTATTCCAATGCAACTTCCACAAAGCGTAACACAAGACTTTGGATaGTTGTTCAGCATCCTACAACAAATGGGGTCTTACAGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: PIPMQLPQSVTQDFG*LFSILQQMGSYRFL
Trigger: AAGAAACCTGTAAGACCCCATTTGTTGTAGGATGCTGAACAAGCATCCAAAGTCTTGTGTTACGCTTTGTGGAAGTTGCATTGGAATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CCA 90 bp AGAACCACTGGTTTAACAGAGGAACTAGAAGGTGTTACTTGCCTGTaGATTTCCATGATTTCCTCAGCAATCATTCGGCCTATTTTTCCT +
Preference number: 5 (lower is better)
Translates to: RTTGLTEELEGVTCL*ISMISSAIIRPIFP
Trigger: AGGAAAAATAGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGCAAGTAACACCTTCTAGTTCCTCTGTTAAACCAGTGGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTTCTCTGGTCTGCCATaGGATGATCTGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCFSGLP*DDLKSQ
Trigger: CTGTGACTTCAGATCATCCAATGGCAGACCAGAGAA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAATTCTCTGGTCTGCCATaGGATGATCTGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: STVSLSNFLDIALHVGTKFSGLP*DDLKSQ
Trigger: CTGTGACTTCAGATCATCCAATGGCAGACCAGAGAA...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCACCTTTCCGTTTGCGGTaGCAATCCACACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSPFRLR*QSTPLV
Trigger: TACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGG...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTGTGTCCATGCTTTCTaGGTAGTCAGTGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYCVHAF*VVSGAA
Trigger: GGCAGCTCCACTGACTACCAAGAAAGCATGGACACA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673817.1
CDS-3UTR CAA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTGTGTCCATGCTTTCTaGGTAGTCAGTGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYCVHAF*VVSGAA
Trigger: GGCAGCTCCACTGACTACCAAGAAAGCATGGACACA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673817.1
CDS-3UTR CAA 90 bp GAGACAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: ETKSIFPRSHPTTNKNPSTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...AGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCATCTGCTGCCCTGAGAATGAGGTGTTTCAATTCATCGTCTGATAGAAAAGTTACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: PSAALRMRCFNSSSDRKVTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...AACTTTTCTATCAGACGATGAATTGAAACACCTCATTCTCAGGGCAGCAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: PGHCVACWYQRSQFIYKTFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...AGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GTCAAACAAACTCTGACCAATCAGATCATTCTGGCTGTAGTTGAGGATCTTGAACTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 5 (lower is better)
Translates to: VKQTLTNQIILAVVEDLELISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...TTCAAGATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTGTTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAAAACTGGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: LDIALHVGTKEANSSIKLASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...CAGTTTTATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CAAAGAGTATCTTCCCTCGGTCACATCCTACGACAAACAAAAATCCATCTGCTGCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: QRVSSLGHILRQTKIHLLRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...CAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATACTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTCCATAGATTTCACCCTGATTTCCCCGTTCACTGGTTGTGGAACTACATGAGACGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: FHRFHPDFPVHWLWNYMRRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...TCTCATGTAGTTCCACAACCAGTGAACGGGGAAATCAGGGTGAAATCTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLISLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 5 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 5 (lower is better)
Translates to: SLSNFLDIALHVGTKEANFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...ATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGTTGCCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAAATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: LLPSGLQKQTFHLSRAEKIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...TTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGGCAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TCGTTGTCAATCATGTCTATACCTATGTGGGGGTTCTCACCAAGAATAGAAGAACATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: SLSIMSIPMWGFSPRIEEHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...TTCTTCTATTCTTGGTGAGAACCCCCACATAGGTATAGACATGATTGACAACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524392.5
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS TCA 90 bp ATCCAGGTGAATTGGAGGAGAACTTCTAAGATCAACCTCCATCTTTaGTCCACAGAAAACAATTTGTCCCCTTCTCCACAAACACTGTTT +
Preference number: 5 (lower is better)
Translates to: IQVNWRRTSKINLHL*STENNLSPSPQTLF
Trigger: AAACAGTGTTTGTGGAGAAGGGGACAAATTGTTTTCTGTGGATCAAAGATGGAGGTTGATCTTAGAAGTTCTCCTCCAATTCACCTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTCTCTGGTCTGCCATaGGATGATCTGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAFSGLP*DDLKSQ
Trigger: CTGTGACTTCAGATCATCCAATGGCAGACCAGAGAA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTTCTCTGGTCTGCCATaGGATGATCTGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSFSGLP*DDLKSQ
Trigger: CTGTGACTTCAGATCATCCAATGGCAGACCAGAGAA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAATTCTCTGGTCTGCCATaGGATGATCTGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: TVSLSNFLDIALHVGTKEFSGLP*DDLKSQ
Trigger: CTGTGACTTCAGATCATCCAATGGCAGACCAGAGAA...TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482049.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 5 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLILISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 5 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAACTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 5 (lower is better)
Translates to: STVSLSNFLDIALHVGTKLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 5 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLISCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 5 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTSCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 5 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLSCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTTGTAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 5 (lower is better)
Translates to: LSFLGVLYILTFHEGHLCSCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...ACAAAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCSCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCTTCCAGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: PSRTLAKTTVLVETIYSTVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...AGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCTGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTTTTATCCTTCCTTGGTGTTCTGTATATTCTAACCTTCCATGAGGGTCATCTTAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: FLSFLGVLYILTFHEGHLSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...AAGATGACCCTCATGGAAGGTTAGAATATACAGAACACCAAGGAAGGATAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCATCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTATCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTTCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTCATTGTCTGGTTCGTaGTCTTCATCCAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYSLSGS*SSSSPI
Trigger: GATGGGGCTGGATGAAGACAACGAACCAGACAATGA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGGACGTTGGCTAAAACAACAGTGTTAGTTGAGACAATATATTCTACTTCCTTGTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 5 (lower is better)
Translates to: RTLAKTTVLVETIYSTSLFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...CAAGGAAGTAGAATATATTGTCTCAACTAACACTGTTGTTTTAGCCAACGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCCCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCATAGATTTCACCCTCTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 5 (lower is better)
Translates to: NKLSIYRVPRNIFHRFHPLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...AGGGTGAAATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMAQDST*EKLSLG
Trigger: ACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGC...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCATTCTCTGGTCTGCCATaGGATGATCTGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSFSGLP*DDLKSQ
Trigger: CTGTGACTTCAGATCATCCAATGGCAGACCAGAGAA...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGTTCTCTGGTCTGCCATaGGATGATCTGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMFSGLP*DDLKSQ
Trigger: CTGTGACTTCAGATCATCCAATGGCAGACCAGAGAA...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: TGAGLVPLCLKLHIVRLTTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...AGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: STVSLSNFLDIALHVGTKTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAATTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: TVSLSNFLDIALHVGTKEFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTCCATAGATTTCACTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: KNKLSIYRVPRNIFHRFHFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...GTGAAATCTATGGAATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 5 (lower is better)
Translates to: CLKLHIVRLTCINGSEMALISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAAGCCTGTGCTGTGGATaGTGCAGAAGCTTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSSLCCG*CRSFFD
Trigger: ATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTAGGTTACACCCCTCATaGTCTGGTTCGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFRLHPS*SGSLSS
Trigger: TGAAGACAACGAACCAGACAATGAGGGGTGTAACCT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 5 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 5 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 5 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTTTCCCCGTTCACTGGTaGTGGAACTACATGAGAATG +
Preference number: 5 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFFPVHW*WNYMRM
Trigger: CATTCTCATGTAGTTCCACAACCAGTGAACGGGGAA...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CCCTCTGGTCTACAAAAACAAACTTTCCATCTATCGCGTGCCGAGAAACATATTATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: PSGLQKQTFHLSRAEKHIIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...AATATGTTTCTCGGCACGCGATAGATGGAAAGTTTGTTTTTGTAGACCAGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGCTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 5 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTCTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATACTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 5 (lower is better)
Translates to: NFLDIALHVGTKEANSSILDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: CLKLHIVRLTCINGSEMAHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGCACAGTAAGTTTATCTAATTTCCTGGACATTGCGTTGCATGTTGGTACCAAATTGGAAAAGTTAAGCTaGGGTCCAAACGTATACACT +
Preference number: 5 (lower is better)
Translates to: STVSLSNFLDIALHVGTKLEKLS*GPNVYT
Trigger: AGTGTATACGTTTGGACCCAAGCTTAACTTTTCCAA...TTTGGTACCAACATGCAACGCAATGTCCAGGAAATTAGATAAACTTACTGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482049.6
ENST00000530357.6
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: CLKLHIVRLTCINGSEMATLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCATTCCTGGACATTGCGTaGCATGTTGGTACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSFLDIA*HVGTKE
Trigger: TTCTTTGGTACCAACATGCAACGCAATGTCCAGGAA...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 5 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTAATTTCCTGGACATaGCGTTGCATGTTGGTACCA +
Preference number: 5 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSLISWT*RCMLVP
Trigger: TGGTACCAACATGCAACGCAATGTCCAGGAAATTAG...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGCTTCTGTGTATGGATaGGTGGCACCTCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSASVYG*VAPLNV
Trigger: AACATTAAGAGGTGCCACCAATCCATACACAGAAGC...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: WSRLSSTLSEVTYSKIDLRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...CAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 5 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYSCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTAGCTGCTCCTTGACTTaGGCAATATCTTTAGGATGC +
Preference number: 5 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFSCSLT*AISLGC
Trigger: GCATCCTAAAGATATTGCCAAAGTCAAGGAGCAGCT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAGAGGGGAAGTCCTaGTCTTCAACCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSVEGKS*SSTFTE
Trigger: TTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTAC...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCCATTTAAAATCTTCTaGCCTCCTGGAGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSPFKIF*PPGEEA
Trigger: TGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGG...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 5 (lower is better)
Translates to: CLKLHIVRLTCINGSEMALDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGCATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: LCLKLHIVRLTCINGSEMHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...CATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCACATTACTGGGACTACTaGATCCTTGGTCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSHYWDY*ILGRCQ
Trigger: TTGACAACGACCAAGGATCAAGTAGTCCCAGTAATG...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTGGAAAAGTTAAGCTaGGGTCCAAACGTATACACT +
Preference number: 5 (lower is better)
Translates to: CLKLHIVRLTCINGSEMALEKLS*GPNVYT
Trigger: AGTGTATACGTTTGGACCCAAGCTTAACTTTTCCAA...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTTGGAAAAGTTAAGCTaGGGTCCAAACGTATACACT +
Preference number: 5 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSLEKLS*GPNVYT
Trigger: AGTGTATACGTTTGGACCCAAGCTTAACTTTTCCAA...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTAACATTGCGTTGCATGTaGGTACCAAAGAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVTLRCM*VPKKPI
Trigger: AATTGGCTTCTTTGGTACCAACATGCAACGCAATGT...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTCTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: CLKLHIVRLTCINGSEMARLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...AGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LTCINGSEMAFMKSVHKSRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...GCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCTCCTTATCATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: GSEMAFMKSVHKSYSLLIIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...GATAAGGAGAGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp GGAGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: GAGLVPLCLKLHIVRLTCIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...ACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AATTTCCTGGACATTGCGTTGCATGTTGGTACCAAAGAAGCCAATTCATCTATAATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: NFLDIALHVGTKEANSSIIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...TATAGATGAATTGGCTTCTTTGGTACCAACATGCAACGCAATGTCCAGGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000673626.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTCTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 5 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATCTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 5 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACTTGATCCTTGGTCGTaGTCAATCATGTCTATACCT +
Preference number: 5 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVLDPWS*SIMSIP
Trigger: AGGTATAGACATGATTGACAACGACCAAGGATCAAG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTTTGGAAAAGTTAAGCTaGGGTCCAAACGTATACACT +
Preference number: 5 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFLEKLS*GPNVYT
Trigger: AGTGTATACGTTTGGACCCAAGCTTAACTTTTCCAA...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTTGGAAAAGTTAAGCTaGGGTCCAAACGTATACACT +
Preference number: 5 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYLEKLS*GPNVYT
Trigger: AGTGTATACGTTTGGACCCAAGCTTAACTTTTCCAA...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: IVRLTCINGSEMAFMKSVRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...TACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp TGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATTCTCGTCTGATAGAAAAGTaGGTTTGTAGTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: CINGSEMAFMKSVHKSYSRLIEK*VCSLLL
Trigger: CAGAAGCAAACTACAAACCAACTTTTCTATCAGACG...AGAATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp ACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAGTACATAAAAGCTATATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: TCINGSEMAFMKSVHKSYIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...ATAGCTTTTATGTACTGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp AGCAGGCTTAGTTCCACTTTGTCTGAAGTTACATATAGTAAGATTGACTTGTATATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: SRLSSTLSEVTYSKIDLYIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...ATACAAGTCAATCTTACTATATGTAACTTCAGACAAAGTGGAACTAAGCCTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATGAAGTCAATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: HIVRLTCINGSEMAFMKSIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...TGACTTCATAAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS-3UTR CAA 90 bp CTGAAGTTACATATAGTAAGATTGACTTGTATCAATGGCTCTGAGATGGCTTTTATATATTCTACTTCCTaGGTCCAAGGGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: LKLHIVRLTCINGSEMAFIYSTS*VQGFMK
Trigger: TTTCATGAACCCTTGGACCAAGGAAGTAGAATATAT...AAAAGCCATCTCAGAGCCATTGATACAAGTCAATCTTACTATATGTAACTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403482.7
ENST00000403510.8
ENST00000524392.5
ENST00000529388.6
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673868.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS TCA 72 bp AGACACACAAGGGGACTGGGGGTTGGAGGGACACAGTaGGCGCCCACAGGCTCACGGCCTCCTTGCTCATCT +
Preference number: 6 (lower is better)
Translates to: RHTRGLGVGGTQ*APTGSRPPCSS
Trigger: AGATGAGCAAGGAGGCCGTGAGCCTGTGGGCGCTCACTGTGTCCCTCCAACCCCCAGTCCCCTTGTGTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403482.7
CDS CAA 90 bp CCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTaGGGCCACCTACAACAAAGGAATCTTCTCCAGAGGGCAGCATGC +
Preference number: 6 (lower is better)
Translates to: PGFPLESLEQWGGSS*GHLQQRNLLQRAAC
Trigger: GCATGCTGCCCTCTGGAGAAGATTCCTTTGTTGTAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673817.1
CDS GCA 72 bp CTGAAGAGTAGACACCAGCCCCGCGGCAGCGCTCTCTaGTGCAAAAAGCTGTCTACGGAGCAAGACGGAAGG +
Preference number: 6 (lower is better)
Translates to: LKSRHQPRGSAL*CKKLSTEQDGR
Trigger: CCTTCCGTCTTGCTCCGTAGACAGCTTTTTGCAGCAGAGAGCGCTGCCGCGGGGCTGGTGTCTACTCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529050.5
ENST00000534544.5
CDS CCA 72 bp GCCCGGGTTCCCCCTGGAATCCCTGGAACAGTGGGGTaGGTCCTCTTTGGGCCACCTACAACAAAGGAATCT +
Preference number: 6 (lower is better)
Translates to: ARVPPGIPGTVG*VLFGPPTTKES
Trigger: AGATTCCTTTGTTGTAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGGGAACCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673817.1
CDS CCA 72 bp AGCTGCCTTTCCGTTTGCGGTTGCAATCCACACCACTaGTACCAAGAGAGCTGGAAAGCAGGTCGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: SCLSVCGCNPHH*YQESWKAGRWG
Trigger: GCCCCACCGACCTGCTTTCCAGCTCTCTTGGTACCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000480685.5
ENST00000482049.6
ENST00000485918.2
ENST00000527998.5
ENST00000529388.6
ENST00000529825.6
ENST00000530357.6
ENST00000531665.5
ENST00000533520.5
ENST00000534544.5
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS GCA 72 bp AAGAGTAGACACCAGCCCCGCGGCAGCGCTCTCTGCTaGAAAAAGCTGTCTACGGAGCAAGACGGAAGGAAA +
Preference number: 6 (lower is better)
Translates to: KSRHQPRGSALC*KKLSTEQDGRK
Trigger: TTTCCTTCCGTCTTGCTCCGTAGACAGCTTTTTGCAGCAGAGAGCGCTGCCGCGGGGCTGGTGTCTACTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529050.5
ENST00000534544.5
CDS CCA 72 bp CCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTTaGGCCACCTACAACAAAGGAATCTTCTCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: PWNPWNSGVGPL*ATYNKGIFSRG
Trigger: CCCTCTGGAGAAGATTCCTTTGTTGTAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673817.1
CDS CAA 72 bp CCCCTGGAATCCCTGGAACAGTGGGGTGGGTCCTCTTaGGGCCACCTACAACAAAGGAATCTTCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: PLESLEQWGGSS*GHLQQRNLLQR
Trigger: CCTCTGGAGAAGATTCCTTTGTTGTAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGATTCCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673817.1
CDS GCA 72 bp ACATGCCCCAAAGGCCTTACTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGCAATCCACACCACTGG +
Preference number: 6 (lower is better)
Translates to: TCPKGLTGSQWS*LSVCGCNPHHW
Trigger: CCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGTAAGGCCTTTGGGGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485918.2
CDS TCA 72 bp ACTGAAGGCCTGTTACACTTCATCTTTTTGCATCTATaGGCCGCTCCCGGGGTGCGGTGTCAGAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: TEGLLHFIFLHL*AAPGVRCQRRR
Trigger: TCTCCTCCTCTGACACCGCACCCCGGGAGCGGCTCATAGATGCAAAAAGATGAAGTGTAACAGGCCTTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497429.5
CDS GCA 72 bp TCTTTTCAGGCGGTCAGCTTCTTCCAAAAACCACAGTaGCCGGCACACAGGAAGCCCTCTAGCGTAGATTCC +
Preference number: 6 (lower is better)
Translates to: SFQAVSFFQKPQ*PAHRKPSSVDS
Trigger: GGAATCTACGCTAGAGGGCTTCCTGTGTGCCGGGCACTGTGGTTTTTGGAAGAAGCTGACCGCCTGAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000482049.6
ENST00000527998.5
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
CDS GCA 72 bp CCCCAAATTCGACCTGTGAATGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGCAATCCACACCACTGG +
Preference number: 6 (lower is better)
Translates to: PQIRPVNGSQWS*LSVCGCNPHHW
Trigger: CCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCATTCACAGGTCGAATTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000401424.6
ENST00000529825.6
ENST00000530357.6
ENST00000673626.1
ENST00000673888.1
ENST00000673892.1
CDS GCA 72 bp TTGTGCTCCCCAAATTCGACTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGCAATCCACACCACTGG +
Preference number: 6 (lower is better)
Translates to: LCSPNSTGSQWS*LSVCGCNPHHW
Trigger: CCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGTCGAATTTGGGGAGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674108.1
CDS GCA 72 bp TACCTCCTCGGAGATTTTCCTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGCAATCCACACCACTGG +
Preference number: 6 (lower is better)
Translates to: YLLGDFPGSQWS*LSVCGCNPHHW
Trigger: CCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGGAAAATCTCCGAGGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673834.1
CDS CCA 72 bp GAGTCAGGCCTGCTCAGAACTGTGCACCATTCAACTTaGCCAAGGTGTCCGGTGTCCACTCTGGACAAAACA +
Preference number: 6 (lower is better)
Translates to: ESGLLRTVHHST*PRCPVSTLDKT
Trigger: TGTTTTGTCCAGAGTGGACACCGGACACCTTGGCCAAGTTGAATGGTGCACAGTTCTGAGCAGGCCTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524392.5
CDS TCA 72 bp CTCTCAGCTCCTACATGGATGAATGTAGCTTTTGGGTaGCCCAGAGACCACTCCTCCACCACCCAGAAGTCT +
Preference number: 6 (lower is better)
Translates to: LSAPTWMNVAFG*PRDHSSTTQKS
Trigger: AGACTTCTGGGTGGTGGAGGAGTGGTCTCTGGGTCACCCAAAAGCTACATTCATCCATGTAGGAGCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS GCA 72 bp TGTCTGTGTCCATGCTTTCTTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGCAATCCACACCACTGG +
Preference number: 6 (lower is better)
Translates to: CLCPCFLGSQWS*LSVCGCNPHHW
Trigger: CCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAAGAAAGCATGGACACAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000403510.8
ENST00000480685.5
ENST00000527998.5
ENST00000529388.6
ENST00000533520.5
ENST00000534544.5
ENST00000673817.1
CDS CCA 72 bp CCAGGTAGAGAGACAGGCCCAGGACTCAGACCCAGGTaGACTGCTTCTAAGCTCCTTCTCTTTCATATGGAA +
Preference number: 6 (lower is better)
Translates to: PGRETGPGLRPR*TASKLLLFHME
Trigger: TTCCATATGAAAGAGAAGGAGCTTAGAAGCAGTCCACCTGGGTCTGAGTCCTGGGCCTGTCTCTCTACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CCA 72 bp AGGACTCTCAGCTCCTACATGGATGAATGTAGCTTTTaGGTGACCCAGAGACCACTCCTCCACCACCCAGAA +
Preference number: 6 (lower is better)
Translates to: RTLSSYMDECSF*VTQRPLLHHPE
Trigger: TTCTGGGTGGTGGAGGAGTGGTCTCTGGGTCACCCAAAAGCTACATTCATCCATGTAGGAGCTGAGAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 90 bp TCGGAACCAATGAAGGCCCAGGATTCCACATTGGAAAAGTTAAGCTaGGGTCCAAACGTATACACTCTAGCCAGCACCACCGTGGCTCGC +
Preference number: 6 (lower is better)
Translates to: SEPMKAQDSTLEKLS*GPNVYTLASTTVAR
Trigger: GCGAGCCACGGTGGTGCTGGCTAGAGTGTATACGTTTGGACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGCCTTCATTGGTTCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000482049.6
ENST00000530357.6
ENST00000673834.1
ENST00000673888.1
CDS CAA 90 bp TCGGAACCAATGAAGGCCCAGGATTCCACATTGGAAAAGTTAAGCTaGGGTCCAAACGTATACACTCTAGCCAGCACCACCTCTTCCCGC +
Preference number: 6 (lower is better)
Translates to: SEPMKAQDSTLEKLS*GPNVYTLASTTSSR
Trigger: GCGGGAAGAGGTGGTGCTGGCTAGAGTGTATACGTTTGGACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGCCTTCATTGGTTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527998.5
CDS GCA 72 bp GTAGGCTCTCTAGGCCATATGGTGTCTTGTCACAAATaGTCAACTCTGCCTCTGCAGCTTGAAAGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: VGSLGHMVSCHK*STLPLQLESSH
Trigger: GTGGCTGCTTTCAAGCTGCAGAGGCAGAGTTGAGCATTTGTGACAAGACACCATATGGCCTAGAGAGCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS GCA 72 bp CCGAGAACTGACACCAAGTTTAACAAGAGGAAGACATaGCCCAAAGGCCTTACTGGTAGTCAGTGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: PRTDTKFNKRKT*PKGLTGSQWSC
Trigger: GCAGCTCCACTGACTACCAGTAAGGCCTTTGGGGCATGTCTTCCTCTTGTTAAACTTGGTGTCAGTTCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485918.2
CDS GCA 72 bp CAAACGAAAAGTCAACAAGTTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGCAATCCACACCACTGG +
Preference number: 6 (lower is better)
Translates to: QTKSQQVGSQWS*LSVCGCNPHHW
Trigger: CCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAACTTGTTGACTTTTCGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482049.6
CDS GCA 72 bp GGTGTTCTGTATATTCTAACTGGTAGTCAGTGGAGCTaGCTTTCCGTTTGCGGTTGCAATCCACACCACTGG +
Preference number: 6 (lower is better)
Translates to: GVLYILTGSQWS*LSVCGCNPHHW
Trigger: CCAGTGGTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAGTTAGAATATACAGAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531665.5
CDS CCA 72 bp TCCTTCCTGATGCAGAAGTCACACCCACTAATCCTGTaGGGTTGGAAAAGAGCTGTGTTACCTATAGGGGGA +
Preference number: 6 (lower is better)
Translates to: SFLMQKSHPLIL*GWKRAVLPIGG
Trigger: TCCCCCTATAGGTAACACAGCTCTTTTCCAACCCCACAGGATTAGTGGGTGTGACTTCTGCATCAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 72 bp TCTCCTTCCTACACAAAGCCTGCCCAGTTAGGTAGCTaGTTTCTTGACCCTGAATTTGCCACTCACATGCCC +
Preference number: 6 (lower is better)
Translates to: SPSYTKPAQLGS*FLDPEFATHMP
Trigger: GGGCATGTGAGTGGCAAATTCAGGGTCAAGAAACAAGCTACCTAACTGGGCAGGCTTTGTGTAGGAAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 90 bp AGCTCTGTGTCTCCTTCCTACACAAAGCCTGCCCAGTTAGGTAGCTaGTTTCTTGACCCTGAATTTGCCACTCACATGCCCACTCAAGAA +
Preference number: 6 (lower is better)
Translates to: SSVSPSYTKPAQLGS*FLDPEFATHMPTQE
Trigger: TTCTTGAGTGGGCATGTGAGTGGCAAATTCAGGGTCAAGAAACAAGCTACCTAACTGGGCAGGCTTTGTGTAGGAAGGAGACACAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS GCA 72 bp GTAGCTTGTTTCTTGACCCTGAATTTGCCACTCACATaGCCACTCAAGAATAGCCCTGGCTTTTCTAGAGGG +
Preference number: 6 (lower is better)
Translates to: VACFLTLNLPLT*PLKNSPGFSRG
Trigger: CCCTCTAGAAAAGCCAGGGCTATTCTTGAGTGGGCATGTGAGTGGCAAATTCAGGGTCAAGAAACAAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 72 bp ATGAAGGCCCAGGATTCCACATTGGAAAAGTTAAGCTaGGGTCCAAACGTATACACTCTAGCCAGCACCACC +
Preference number: 6 (lower is better)
Translates to: MKAQDSTLEKLS*GPNVYTLASTT
Trigger: GGTGGTGCTGGCTAGAGTGTATACGTTTGGACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000389707.8
ENST00000401424.6
ENST00000403290.6
ENST00000403510.8
ENST00000480685.5
ENST00000482049.6
ENST00000527998.5
ENST00000529388.6
ENST00000529825.6
ENST00000530357.6
ENST00000531665.5
ENST00000673626.1
ENST00000673817.1
ENST00000673834.1
ENST00000673888.1
ENST00000673892.1
ENST00000674108.1
CDS CAA 72 bp ATGAAGGCCCAGGATTCCACATTGGAAAAGTTAAGCTaGGGTCCAAACGTATACACTCTAGCCAGCACCACG +
Preference number: 6 (lower is better)
Translates to: MKAQDSTLEKLS*GPNVYTLASTT
Trigger: CGTGGTGCTGGCTAGAGTGTATACGTTTGGACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529050.5
ENST00000534544.5
CDS CAA 90 bp CTAAATACTTGTCAGGCTGAAGGACCTCAGGAAAGAATCCATCACTaGGCATTGCAGCTACAGTTTAGGGAGAGTGTGATGGCAGTTGTG +
Preference number: 6 (lower is better)
Translates to: LNTCQAEGPQERIHH*ALQLQFRESVMAVV
Trigger: CACAACTGCCATCACACTCTCCCTAAACTGTAGCTGCAATGCCAAGTGATGGATTCTTTCCTGAGGTCCTTCAGCCTGACAAGTATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS TCA 72 bp GAATGGCAAAGTTACACATTGCTGTTTTCTTCTGCCTaGTCCTGTCATCTCTCTGCAGACACACAAGGGGAC +
Preference number: 6 (lower is better)
Translates to: EWQSYTLLFSSA*SCHLSADTQGD
Trigger: GTCCCCTTGTGTGTCTGCAGAGAGATGACAGGATCAGGCAGAAGAAAACAGCAATGTGTAACTTTGCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403482.7
CDS TCA 72 bp GATGTTCAATGGGCTGGAGCCACAGCTAGAAGGCGATaGCCCTCTTATCCTGTCAGAAAAGAGAATTACACT +
Preference number: 6 (lower is better)
Translates to: DVQWAGATARRR*PSYPVRKENYT
Trigger: AGTGTAATTCTCTTTTCTGACAGGATAAGAGGGTCATCGCCTTCTAGCTGTGGCTCCAGCCCATTGAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS GCA 72 bp AGCCCTGGCTTTTCTAGAGGGAACATCCACTCTTATTaGAAACCCTGGCTAAGGCCAAGTTCAAATCTTTCC +
Preference number: 6 (lower is better)
Translates to: SPGFSRGNIHSY*KPWLRPSSNLS
Trigger: GGAAAGATTTGAACTTGGCCTTAGCCAGGGTTTGCAATAAGAGTGGATGTTCCCTCTAGAAAAGCCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS GCA 72 bp ATATGGTGTCTTGTCACAAATGCTCAACTCTGCCTCTaGAGCTTGAAAGCAGCCACAGATACGAATCGGTGT +
Preference number: 6 (lower is better)
Translates to: IWCLVTNAQLCL*SLKAATDTNRC
Trigger: ACACCGATTCGTATCTGTGGCTGCTTTCAAGCTGCAGAGGCAGAGTTGAGCATTTGTGACAAGACACCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CCA 72 bp GTGAATCAAACGAAAAGTCAACAAGTTGGTAGTCAGTaGAGCTGCCTTTCCGTTTGCGGTTGCAATCCACAC +
Preference number: 6 (lower is better)
Translates to: VNQTKSQQVGSQ*SCLSVCGCNPH
Trigger: GTGTGGATTGCAACCGCAAACGGAAAGGCAGCTCCACTGACTACCAACTTGTTGACTTTTCGTTTGATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482049.6
CDS CCA 72 bp GTTCTTTGCGTTCATCATGACCTCCAAGTGTCCCACTaGAGCTGTCATTCCCGTAGTTCCAAAGAGAATACT +
Preference number: 6 (lower is better)
Translates to: VLCVHHDLQVSH*SCHSRSSKENT
Trigger: AGTATTCTCTTTGGAACTACGGGAATGACAGCTCCAGTGGGACACTTGGAGGTCATGATGAACGCAAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529050.5
ENST00000534544.5
CDS CAA 72 bp AGTAGTGACAGGAAAAGCAGCCTTCGAAGGCAGTGGTaGATGAAAAATGGGTCCAGGCCTTTCTTATCTAGC +
Preference number: 6 (lower is better)
Translates to: SSDRKSSLRRQW*MKNGSRPFLSS
Trigger: GCTAGATAAGAAAGGCCTGGACCCATTTTTCATCAACCACTGCCTTCGAAGGCTGCTTTTCCTGTCACTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS TCA 72 bp AGGAAGTCTCTCCCAAGACAGCTAGTAATAACTAGCTaGTCTGCTTGGTTTCTAGTACTAATCCTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: RKSLPRQLVITS*SAWFLVLILGS
Trigger: GCTGCCCAGGATTAGTACTAGAAACCAAGCAGATCAGCTAGTTATTACTAGCTGTCTTGGGAGAGACTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CCA 72 bp AGTAGTAGTGACAGGAAAAGCAGCCTTCGAAGGCAGTaGTTGATGAAAAATGGGTCCAGGCCTTTCTTATCT +
Preference number: 6 (lower is better)
Translates to: SSSDRKSSLRRQ*LMKNGSRPFLS
Trigger: AGATAAGAAAGGCCTGGACCCATTTTTCATCAACCACTGCCTTCGAAGGCTGCTTTTCCTGTCACTACTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 90 bp TGGGTTGAGAACCACTGGTTTAACAGAGGAACTAGAAGGTGTTACTaGCCTGTGGATTTCCATGATTTCCTCAGCAATCATTCGGCCTAT +
Preference number: 6 (lower is better)
Translates to: WVENHWFNRGTRRCY*PVDFHDFLSNHSAY
Trigger: ATAGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGCAAGTAACACCTTCTAGTTCCTCTGTTAAACCAGTGGTTCTCAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 90 bp TCTAGAATGCAGTCCCTAGAGTCAAGCATCTCACTGACAAAGCCCTaGGATTGGAGTTTGCATTCAGTTGGTGAATTTCAAGTAAGTGGC +
Preference number: 6 (lower is better)
Translates to: SRMQSLESSISLTKP*DWSLHSVGEFQVSG
Trigger: GCCACTTACTTGAAATTCACCAACTGAATGCAAACTCCAATCCAAGGGCTTTGTCAGTGAGATGCTTGACTCTAGGGACTGCATTCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS TCA 72 bp AAACAGATGACAAGCTGGATTTGTTCTACAGGCACCTaGTCTAGAATGCAGTCCCTAGAGTCAAGCATCTCA +
Preference number: 6 (lower is better)
Translates to: KQMTSWICSTGT*SRMQSLESSIS
Trigger: TGAGATGCTTGACTCTAGGGACTGCATTCTAGATCAGGTGCCTGTAGAACAAATCCAGCTTGTCATCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS TCA 72 bp GCAGGTAGAGGGGAAGTCCTTGTCTTCAACCTTTACTaGAGGCCTGTTACACTTCATCTTTTTGCATCTATG +
Preference number: 6 (lower is better)
Translates to: AGRGEVLVFNLY*RPVTLHLFASM
Trigger: CATAGATGCAAAAAGATGAAGTGTAACAGGCCTTCAGTAAAGGTTGAAGACAAGGACTTCCCCTCTACCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497429.5
CDS CCA 72 bp GGTTTAACAGAGGAACTAGAAGGTGTTACTTGCCTGTaGATTTCCATGATTTCCTCAGCAATCATTCGGCCT +
Preference number: 6 (lower is better)
Translates to: GLTEELEGVTCL*ISMISSAIIRP
Trigger: AGGCCGAATGATTGCTGAGGAAATCATGGAAATCCACAGGCAAGTAACACCTTCTAGTTCCTCTGTTAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CCA 72 bp CCTGTTTACTGTAGGATGTTTAACAAGCAGCATCCCTaGTCTCTATCCACAGGATGTTTAAGTAGCAACCTC +
Preference number: 6 (lower is better)
Translates to: PVYCRMFNKQHP*SLSTGCLSSNL
Trigger: GAGGTTGCTACTTAAACATCCTGTGGATAGAGACCAGGGATGCTGCTTGTTAAACATCCTACAGTAAACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CCA 72 bp TCCAATGCAACTTCCACAAAGCGTAACACAAGACTTTaGATGCTTGTTCAGCATCCTACAACAAATGGGGTC +
Preference number: 6 (lower is better)
Translates to: SNATSTKRNTRL*MLVQHPTTNGV
Trigger: GACCCCATTTGTTGTAGGATGCTGAACAAGCATCCAAAGTCTTGTGTTACGCTTTGTGGAAGTTGCATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 72 bp ATGACATCGGAACCAATGAAGGCCCAGGATTCCACATaGGAAAAGTTAAGCTTGGGTCCAAACGTATACACT +
Preference number: 6 (lower is better)
Translates to: MTSEPMKAQDST*EKLSLGPNVYT
Trigger: AGTGTATACGTTTGGACCCAAGCTTAACTTTTCCAATGTGGAATCCTGGGCCTTCATTGGTTCCGATGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000389707.8
ENST00000403290.6
ENST00000482049.6
ENST00000527998.5
ENST00000530357.6
ENST00000673834.1
ENST00000673888.1
CDS CAA 72 bp TCAAGCATCTCACTGACAAAGCCCTTGGATTGGAGTTaGCATTCAGTTGGTGAATTTCAAGTAAGTGGCCAG +
Preference number: 6 (lower is better)
Translates to: SSISLTKPLDWS*HSVGEFQVSGQ
Trigger: CTGGCCACTTACTTGAAATTCACCAACTGAATGCAAACTCCAATCCAAGGGCTTTGTCAGTGAGATGCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 72 bp CAGTCCCTAGAGTCAAGCATCTCACTGACAAAGCCCTaGGATTGGAGTTTGCATTCAGTTGGTGAATTTCAA +
Preference number: 6 (lower is better)
Translates to: QSLESSISLTKP*DWSLHSVGEFQ
Trigger: TTGAAATTCACCAACTGAATGCAAACTCCAATCCAAGGGCTTTGTCAGTGAGATGCTTGACTCTAGGGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS GCA 72 bp ATGCAACTTCCACAAAGCGTAACACAAGACTTTGGATaGTTGTTCAGCATCCTACAACAAATGGGGTCTTAC +
Preference number: 6 (lower is better)
Translates to: MQLPQSVTQDFG*LFSILQQMGSY
Trigger: GTAAGACCCCATTTGTTGTAGGATGCTGAACAAGCATCCAAAGTCTTGTGTTACGCTTTGTGGAAGTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CCA 72 bp ATTTTTAAGCACTCACTATATGTCAGGCTGTGTTCCTaGAACTTTCCTGAGTGCCCTCACAATCCTAACACA +
Preference number: 6 (lower is better)
Translates to: IFKHSLYVRLCS*NFPECPHNPNT
Trigger: TGTGTTAGGATTGTGAGGGCACTCAGGAAAGTTCCAGGAACACAGCCTGACATATAGTGAGTGCTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 72 bp GAAGAATCTGGTTACCACCTTCTCTATTCCCCAAATTaGGACAGACTTATGATAACTGCTTCCCTCTCGACT +
Preference number: 6 (lower is better)
Translates to: EESGYHLLYSPN*DRLMITASLST
Trigger: AGTCGAGAGGGAAGCAGTTATCATAAGTCTGTCCAAATTTGGGGAATAGAGAAGGTGGTAACCAGATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 90 bp TCCCTAGAGTCAAGCATCTCACTGACAAAGCCCTTGGATTGGAGTTaGCATTCAGTTGGTGAATTTCAAGTAAGTGGCCAGTTTTATTTC +
Preference number: 6 (lower is better)
Translates to: SLESSISLTKPLDWS*HSVGEFQVSGQFYF
Trigger: GAAATAAAACTGGCCACTTACTTGAAATTCACCAACTGAATGCAAACTCCAATCCAAGGGCTTTGTCAGTGAGATGCTTGACTCTAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS TCA 72 bp CTTAGAACTGTAAATCCACCTAAATACTTGTCAGGCTaGAGGACCTCAGGAAAGAATCCATCACTTGGCATT +
Preference number: 6 (lower is better)
Translates to: LRTVNPPKYLSG*RTSGKNPSLGI
Trigger: AATGCCAAGTGATGGATTCTTTCCTGAGGTCCTTCAGCCTGACAAGTATTTAGGTGGATTTACAGTTCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CCA 72 bp AAGACTTTGGATGCTTGTTCAGCATCCTACAACAAATaGGGTCTTACAGGTTTCTTCCAAACTGCACAGTAT +
Preference number: 6 (lower is better)
Translates to: KTLDACSASYNK*GLTGFFQTAQY
Trigger: ATACTGTGCAGTTTGGAAGAAACCTGTAAGACCCCATTTGTTGTAGGATGCTGAACAAGCATCCAAAGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CCA 72 bp CTAGAGTCAAGCATCTCACTGACAAAGCCCTTGGATTaGAGTTTGCATTCAGTTGGTGAATTTCAAGTAAGT +
Preference number: 6 (lower is better)
Translates to: LESSISLTKPLD*SLHSVGEFQVS
Trigger: ACTTACTTGAAATTCACCAACTGAATGCAAACTCCAATCCAAGGGCTTTGTCAGTGAGATGCTTGACTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 72 bp AACCACTGGTTTAACAGAGGAACTAGAAGGTGTTACTaGCCTGTGGATTTCCATGATTTCCTCAGCAATCAT +
Preference number: 6 (lower is better)
Translates to: NHWFNRGTRRCY*PVDFHDFLSNH
Trigger: ATGATTGCTGAGGAAATCATGGAAATCCACAGGCAAGTAACACCTTCTAGTTCCTCTGTTAAACCAGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 90 bp TTTCGTTCTGAAGAATCTGGTTACCACCTTCTCTATTCCCCAAATTaGGACAGACTTATGATAACTGCTTCCCTCTCGACTGCTCTTAAA +
Preference number: 6 (lower is better)
Translates to: FRSEESGYHLLYSPN*DRLMITASLSTALK
Trigger: TTTAAGAGCAGTCGAGAGGGAAGCAGTTATCATAAGTCTGTCCAAATTTGGGGAATAGAGAAGGTGGTAACCAGATTCTTCAGAACGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 90 bp GTTCCTGGAACTTTCCTGAGTGCCCTCACAATCCTAACACAATTCTaGGGAAATAGTGCTTTCTTTTTATGGTTTAAATCAACAGAGAGC +
Preference number: 6 (lower is better)
Translates to: VPGTFLSALTILTQF*GNSAFFLWFKSTES
Trigger: GCTCTCTGTTGATTTAAACCATAAAAAGAAAGCACTATTTCCCAAGAATTGTGTTAGGATTGTGAGGGCACTCAGGAAAGTTCCAGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS TCA 72 bp AATTGGAGGAGAACTTCTAAGATCAACCTCCATCTTTaGTCCACAGAAAACAATTTGTCCCCTTCTCCACAA +
Preference number: 6 (lower is better)
Translates to: NWRRTSKINLHL*STENNLSPSPQ
Trigger: TTGTGGAGAAGGGGACAAATTGTTTTCTGTGGATCAAAGATGGAGGTTGATCTTAGAAGTTCTCCTCCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472842.1
CDS CAA 72 bp AAAATTCTTGAGGTCAAGGACTGTTTGATACTGTTCTaGGATGGTCTCAAGCAAAATACAGGGTATGCAAAT +
Preference number: 6 (lower is better)
Translates to: KILEVKDCLILF*DGLKQNTGYAN
Trigger: ATTTGCATACCCTGTATTTTGCTTGAGACCATCCAAGAACAGTATCAAACAGTCCTTGACCTCAAGAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472842.1