RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARNT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000172379

Ensembl transcript IDs: ENST00000303329.9, ENST00000525103.1, ENST00000525505.1, ENST00000527771.5, ENST00000529181.1, ENST00000531595.3, ENST00000533983.5, ENST00000558849.1, ENST00000622346.4

Found 1064 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGACCCTGCCGAAGTGTCAGCCTGTTAGCCCAGCTCCCAGACCCTaGGCCGAGCAACCTCTGGTCATGGCCGGTGGTGCTGAGCTTGGG +
Preference number: 1 (lower is better)
Translates to: VTLPKCQPVSPAPRP*AEQPLVMAGGAELG
Trigger: CCCAAGCTCAGCACCACCGGCCATGACCAGAGGTTGCTCGGCCCAGGGTCTGGGAGCTGGGCTAACAGGCTGACACTTCGGCAGGGTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp GGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATaGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCC +
Preference number: 1 (lower is better)
Translates to: GPAAGQAGRGWASFT*ASTSQYGWHCTAGA
Trigger: GGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
3UTR CCA 90 bp GTGGCCCCAAGGGCAGGGCAGGCAGAGAAAGGCCCATTCTGGGGCTaGCCCTGGGAGGATGTGCAGGGTTTCAACCACCTGCCATTTCCC +
Preference number: 1 (lower is better)
Translates to: VAPRAGQAEKGPFWG*PWEDVQGFNHLPFP
Trigger: GGGAAATGGCAGGTGGTTGAAACCCTGCACATCCTCCCAGGGCCAGCCCCAGAATGGGCCTTTCTCTGCCTGCCCTGCCCTTGGGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp ACCAGCGGAGCTGAGGGGCAGGCGCCTCTGTGTCTCTGTGCTTCTTaGCTCCAGCTGGCAGAACGAGGGCTGTGCACTCTGCTTGCCCAT +
Preference number: 1 (lower is better)
Translates to: TSGAEGQAPLCLCAS*LQLAERGLCTLLAH
Trigger: ATGGGCAAGCAGAGTGCACAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTGCCCCTCAGCTCCGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp CTGTTAGCCCAGCTCCCAGACCCTGGGCCGAGCAACCTCTGGTCATaGCCGGTGGTGCTGAGCTTGGGGACAGGGCCACACATTTTGGCT +
Preference number: 1 (lower is better)
Translates to: LLAQLPDPGPSNLWS*PVVLSLGTGPHILA
Trigger: AGCCAAAATGTGTGGCCCTGTCCCCAAGCTCAGCACCACCGGCCATGACCAGAGGTTGCTCGGCCCAGGGTCTGGGAGCTGGGCTAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp GAACTGACCTACCCATGTGAGCATGCCCCTAGCTGTGCCTCCTGGTaGCCCTGCCGAAGTGTCAGCCTGTTAGCCCAGCTCCCAGACCCT +
Preference number: 1 (lower is better)
Translates to: ELTYPCEHAPSCASW*PCRSVSLLAQLPDP
Trigger: AGGGTCTGGGAGCTGGGCTAACAGGCTGACACTTCGGCAGGGTCACCAGGAGGCACAGCTAGGGGCATGCTCACATGGGTAGGTCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp CTGAGGGGCAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTaGCAGAACGAGGGCTGTGCACTCTGCTTGCCCATTTTCCCAGCA +
Preference number: 1 (lower is better)
Translates to: LRGRRLCVSVLLGSS*QNEGCALCLPIFPA
Trigger: TGCTGGGAAAATGGGCAAGCAGAGTGCACAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp TCCCAGACCCTGGGCCGAGCAACCTCTGGTCATGGCCGGTGGTGCTaGGCTTGGGGACAGGGCCACACATTTTGGCTCTCTACATACTCT +
Preference number: 1 (lower is better)
Translates to: SQTLGRATSGHGRWC*AWGQGHTFWLSTYS
Trigger: AGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCCCCAAGCTCAGCACCACCGGCCATGACCAGAGGTTGCTCGGCCCAGGGTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp GCGTCCTACCCTGCTATCTACATCTGTAAAGAAGGGCCAGGCCTCTaGCCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGCAGGCACAAGG +
Preference number: 1 (lower is better)
Translates to: ASYPAIYICKEGPGL*PQGVLSCRLWAGTR
Trigger: CCTTGTGCCTGCCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGATGTAGATAGCAGGGTAGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 90 bp GGCAGGCAGAGAAAGGCCCATTCTGGGGCTGGCCCTGGGAGGATGTaGAGGGTTTCAACCACCTGCCATTTCCCCAGAAGCAAGAAAGCC +
Preference number: 1 (lower is better)
Translates to: GRQRKAHSGAGPGRM*RVSTTCHFPRSKKA
Trigger: GGCTTTCTTGCTTCTGGGGAAATGGCAGGTGGTTGAAACCCTGCACATCCTCCCAGGGCCAGCCCCAGAATGGGCCTTTCTCTGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp TCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATaGGCTGAAGGACAAGCAGACCACAGGGGCCATGAGCATTCCGGC +
Preference number: 1 (lower is better)
Translates to: SSFEPVSSQRGICWA*AEGQADHRGHEHSG
Trigger: GCCGGAATGCTCATGGCCCCTGTGGTCTGCTTGTCCTTCAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp CTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTaGTGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCC +
Preference number: 1 (lower is better)
Translates to: LEPSLAILLPSLTQS*WSLTVAASVSLLPA
Trigger: GGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 90 bp CTATCTACATCTGTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTaGTGTCCTGCAGGCTCTGGGCAGGCACAAGGTCCTCCTCTCACC +
Preference number: 1 (lower is better)
Translates to: LSTSVKKGQASDLKA*CPAGSGQAQGPPLT
Trigger: GGTGAGAGGAGGACCTTGTGCCTGCCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGATGTAGATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 90 bp CCATGTCACACTGCACAAATTACATATGTCCCACGGCACAGTGGATaGACAGACAGACCAGCGGAGCTGAGGGGCAGGCGCCTCTGTGTC +
Preference number: 1 (lower is better)
Translates to: PCHTAQITYVPRHSG*TDRPAELRGRRLCV
Trigger: GACACAGAGGCGCCTGCCCCTCAGCTCCGCTGGTCTGTCTGTGCATCCACTGTGCCGTGGGACATATGTAATTTGTGCAGTGTGACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp CACCAGAGAAATTCAAGGCCGGTGGGTGTGTGGCAGAACCAGAACTaGAACCCATGTCTTCTGCCCCTGAGACCTGCACTCTGTGCCTCC +
Preference number: 1 (lower is better)
Translates to: HQRNSRPVGVWQNQN*NPCLLPLRPALCAS
Trigger: GGAGGCACAGAGTGCAGGTCTCAGGGGCAGAAGACATGGGTTCCAGTTCTGGTTCTGCCACACACCCACCGGCCTTGAATTTCTCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp TGTGGGATCAGGAACACAGCTATTCAGATCCAATTGGGAGGAGGGTaGGTGCTCCCTTGGGGCTCCTGTGGGAGGAAGGAGCTGCTTCCT +
Preference number: 1 (lower is better)
Translates to: CGIRNTAIQIQLGGG*VLPWGSCGRKELLP
Trigger: AGGAAGCAGCTCCTTCCTCCCACAGGAGCCCCAAGGGAGCACTCACCCTCCTCCCAATTGGATCTGAATAGCTGTGTTCCTGATCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp ACCTGCACTCTGTGCCTCCCAGAGCTGCTGTTCCTCCAGTCGGGCTaGAGAACGAAGGCTCAGGTGGCCTGGAAGAAAGTGTTTCATGGT +
Preference number: 1 (lower is better)
Translates to: TCTLCLPELLFLQSG*RTKAQVAWKKVFHG
Trigger: ACCATGAAACACTTTCTTCCAGGCCACCTGAGCCTTCGTTCTTCAGCCCGACTGGAGGAACAGCAGCTCTGGGAGGCACAGAGTGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp AAGTCCATGTCACACTGCACAAATTACATATGTCCCACGGCACAGTaGATGCACAGACAGACCAGCGGAGCTGAGGGGCAGGCGCCTCTG +
Preference number: 1 (lower is better)
Translates to: KSMSHCTNYICPTAQ*MHRQTSGAEGQAPL
Trigger: CAGAGGCGCCTGCCCCTCAGCTCCGCTGGTCTGTCTGTGCATCCACTGTGCCGTGGGACATATGTAATTTGTGCAGTGTGACATGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp GGGCTGAAGAACGAAGGCTCAGGTGGCCTGGAAGAAAGTGTTTCATaGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCTATCTAC +
Preference number: 1 (lower is better)
Translates to: GLKNEGSGGLEESVS*CPCEKAWASYPAIY
Trigger: GTAGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCAGGCCACCTGAGCCTTCGTTCTTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp AAGAGGAGGAGCTTGAATCTGCACCAGAGGCTTGGACCAAAGAACTaGCCTACCCATGTGAGCATGCCCCTAGCTGTGCCTCCTGGTGAC +
Preference number: 1 (lower is better)
Translates to: KRRSLNLHQRLGPKN*PTHVSMPLAVPPGD
Trigger: GTCACCAGGAGGCACAGCTAGGGGCATGCTCACATGGGTAGGTCAGTTCTTTGGTCCAAGCCTCTGGTGCAGATTCAAGCTCCTCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp GGTGGCCTGGAAGAAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTaGGCGTCCTACCCTGCTATCTACATCTGTAAAGAAGGGCCAGGC +
Preference number: 1 (lower is better)
Translates to: GGLEESVSWCPCEKA*ASYPAIYICKEGPG
Trigger: GCCTGGCCCTTCTTTACAGATGTAGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCAGGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp GCTCTGGGCAGGCACAAGGTCCTCCTCTCACCAGTGGGGCAAGGATaGGACATGCTTATGTGGGATCAGGAACACAGCTATTCAGATCCA +
Preference number: 1 (lower is better)
Translates to: ALGRHKVLLSPVGQG*DMLMWDQEHSYSDP
Trigger: TGGATCTGAATAGCTGTGTTCCTGATCCCACATAAGCATGTCTCATCCTTGCCCCACTGGTGAGAGGAGGACCTTGTGCCTGCCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp TGCAGCAGCCACGGTACCTTTTCTACCATATGGGAGTCAGTGGGCTaGTGGGCTGGTGATAAGAAACAGGGAGGGGGCGTAATGGTCACA +
Preference number: 1 (lower is better)
Translates to: CSSHGTFSTIWESVG*WAGDKKQGGGVMVT
Trigger: TGTGACCATTACGCCCCCTCCCTGTTTCTTATCACCAGCCCATCAGCCCACTGACTCCCATATGGTAGAAAAGGTACCGTGGCTGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 90 bp CTGAAGAACGAAGGCTCAGGTGGCCTGGAAGAAAGTGTTTCATGGTaGCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCTATCTACATC +
Preference number: 1 (lower is better)
Translates to: LKNEGSGGLEESVSW*PCEKAWASYPAIYI
Trigger: GATGTAGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCAGGCCACCTGAGCCTTCGTTCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 90 bp GCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTaGCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGT +
Preference number: 1 (lower is better)
Translates to: ARDTYAWKCACTTVW*LLKLPQTPDGQRKG
Trigger: ACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR GCA 90 bp CCCGCACAGCCTGTGAAACCTCCATTTTGCCACTTTCAAGGTCAGTaGCCCACAGACCCTGGCCTGTTGTTGACCATAACACTAGCTTTG +
Preference number: 1 (lower is better)
Translates to: PAQPVKPPFCHFQGQ*PTDPGLLLTITLAL
Trigger: CAAAGCTAGTGTTATGGTCAACAACAGGCCAGGGTCTGTGGGGCACTGACCTTGAAAGTGGCAAAATGGAGGTTTCACAGGCTGTGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR CCA 90 bp CCCCCAGCAACATTGAGCACATGGATCTCCCTGGCCAGACAGGGCTaGGGTTTAATGTGGAGCTTTCAATGGATCACAGCAAACACTCTC +
Preference number: 1 (lower is better)
Translates to: PPATLSTWISLARQG*GLMWSFQWITANTL
Trigger: GAGAGTGTTTGCTGTGATCCATTGAAAGCTCCACATTAAACCCCAGCCCTGTCTGGCCAGGGAGATCCATGTGCTCAATGTTGCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp GTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTAGGACAGAGCTaGAAGGGAAGGAGGCTGGGCCTATTTAGTCATAATGCCTCCCCA +
Preference number: 1 (lower is better)
Translates to: VRLYSDFPPMLLGQS*KGRRLGLFSHNASP
Trigger: TGGGGAGGCATTATGACTAAATAGGCCCAGCCTCCTTCCCTTCCAGCTCTGTCCTAGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp ACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTaGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCCC +
Preference number: 1 (lower is better)
Translates to: TITLALATKARDTYA*KCACTTVWCLLKLP
Trigger: GGGCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR GCA 90 bp GCAGGCACAAGGTCCTCCTCTCACCAGTGGGGCAAGGATGAGACATaGTTATGTGGGATCAGGAACACAGCTATTCAGATCCAATTGGGA +
Preference number: 1 (lower is better)
Translates to: AGTRSSSHQWGKDET*LCGIRNTAIQIQLG
Trigger: TCCCAATTGGATCTGAATAGCTGTGTTCCTGATCCCACATAAGCATGTCTCATCCTTGCCCCACTGGTGAGAGGAGGACCTTGTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 90 bp ACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTaGCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTG +
Preference number: 1 (lower is better)
Translates to: TLGNVPAPLCGASLS*PRLQMVKEKVNVQV
Trigger: CACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR CCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTaGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAA +
Preference number: 1 (lower is better)
Translates to: KARDTYAWKCACTTV*CLLKLPQTPDGQRK
Trigger: TTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR TCA 90 bp CAGGGTTTCAACCACCTGCCATTTCCCCAGAAGCAAGAAAGCCTCTaGGGTTGGAGTGAACACTGCATGCATCTACAGTGGAGACCCAAT +
Preference number: 1 (lower is better)
Translates to: QGFNHLPFPQKQESL*GWSEHCMHLQWRPN
Trigger: ATTGGGTCTCCACTGTAGATGCATGCAGTGTTCACTCCAACCTCAGAGGCTTTCTTGCTTCTGGGGAAATGGCAGGTGGTTGAAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 90 bp GAGCTTTCAATGGATCACAGCAAACACTCTCTCCAAACTCCTTCCTaGATGCTGGCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCC +
Preference number: 1 (lower is better)
Translates to: ELSMDHSKHSLQTPS*MLASLHSQVPRTNA
Trigger: GGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGCCAGCATGCAGGAAGGAGTTTGGAGAGAGTGTTTGCTGTGATCCATTGAAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 90 bp TTTCAATGGATCACAGCAAACACTCTCTCCAAACTCCTTCCTGCATaGTGGCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTC +
Preference number: 1 (lower is better)
Translates to: FQWITANTLSKLLPA*WPHSTLRFLEPMPL
Trigger: GAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGCCAGCATGCAGGAAGGAGTTTGGAGAGAGTGTTTGCTGTGATCCATTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp TTGAGCACATGGATCTCCCTGGCCAGACAGGGCTGGGGTTTAATGTaGAGCTTTCAATGGATCACAGCAAACACTCTCTCCAAACTCCTT +
Preference number: 1 (lower is better)
Translates to: LSTWISLARQGWGLM*SFQWITANTLSKLL
Trigger: AAGGAGTTTGGAGAGAGTGTTTGCTGTGATCCATTGAAAGCTCCACATTAAACCCCAGCCCTGTCTGGCCAGGGAGATCCATGTGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp TTTAGTCATAATGCCTCCCCATCAGGTCTAGCTTTCATTCATCCATaGATCCTCACCCAAGGGCCAAGAACTGAGTTCACTGCACCCTGG +
Preference number: 1 (lower is better)
Translates to: FSHNASPSGLAFIHP*ILTQGPRTEFTAPW
Trigger: CCAGGGTGCAGTGAACTCAGTTCTTGGCCCTTGGGTGAGGATTCATGGATGAATGAAAGCTAGACCTGATGGGGAGGCATTATGACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp GCATCCTGGGCAGGCCTGCTGGTGCTGCTTGGTCACTCTGGGCATTaGCTGAACTTTCATGGGTATAAATTGTCTATCAAGAGATTATTC +
Preference number: 1 (lower is better)
Translates to: ASWAGLLVLLGHSGH*LNFHGYKLSIKRLF
Trigger: GAATAATCTCTTGATAGACAATTTATACCCATGAAAGTTCAGCCAATGCCCAGAGTGACCAAGCAGCACCAGCAGGCCTGCCCAGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp CCTGGGCAGGCCTGCTGGTGCTGCTTGGTCACTCTGGGCATTGGCTaGACTTTCATGGGTATAAATTGTCTATCAAGAGATTATTCACAA +
Preference number: 1 (lower is better)
Translates to: PGQACWCCLVTLGIG*TFMGINCLSRDYSQ
Trigger: TTGTGAATAATCTCTTGATAGACAATTTATACCCATGAAAGTTCAGCCAATGCCCAGAGTGACCAAGCAGCACCAGCAGGCCTGCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 90 bp AGCTCTAGAAACTGCAAAGTTGGGGTTAAGTTAGAGTCTAGGAACTaGAGTCATGCACAGCTGGCGACCAGCCAAAGGCATTTTACTGAG +
Preference number: 1 (lower is better)
Translates to: SSRNCKVGVKLESRN*SHAQLATSQRHFTE
Trigger: CTCAGTAAAATGCCTTTGGCTGGTCGCCAGCTGTGCATGACTGCAGTTCCTAGACTCTAACTTAACCCCAACTTTGCAGTTTCTAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp GCTCTCTACATACTCTGGATTCTATACAATCACGCTGGCCACACATaGCAGACACAAGGCACAACACATCCATTAGGACAGCAAGTCCAT +
Preference number: 1 (lower is better)
Translates to: ALYILWILYNHAGHT*QTQGTTHPLGQQVH
Trigger: ATGGACTTGCTGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTGTATAGAATCCAGAGTATGTAGAGAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 90 bp ACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGCTaGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACA +
Preference number: 1 (lower is better)
Translates to: THFGSLHTLDSIQSR*PHMTDTRHNTSIRT
Trigger: TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 90 bp GTAGAATCTGGTATGTTGGAGAGTAGAGCAGAATGTGGCTATTTGTaGTGGCTGTCACTCCCTGAAGCCAAAGCTAAAAATAAAACTGGG +
Preference number: 1 (lower is better)
Translates to: VESGMLESRAECGYL*WLSLPEAKAKNKTG
Trigger: CCCAGTTTTATTTTTAGCTTTGGCTTCAGGGAGTGACAGCCATCACAAATAGCCACATTCTGCTCTACTCTCCAACATACCAGATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 90 bp ACAGTGGAGACCCAATCACCATTACAGACAAAAAGCTCTAGAAACTaGAAAGTTGGGGTTAAGTTAGAGTCTAGGAACTGCAGTCATGCA +
Preference number: 1 (lower is better)
Translates to: TVETQSPLQTKSSRN*KVGVKLESRNCSHA
Trigger: TGCATGACTGCAGTTCCTAGACTCTAACTTAACCCCAACTTTGCAGTTTCTAGAGCTTTTTGTCTGTAATGGTGATTGGGTCTCCACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACAGGAGATGGCTTCTGGTaGGGGGCCTGCGGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTGDGFW*GACGRA
Trigger: TGCCCTGCCGCAGGCCCCCCACCAGAAGCCATCTCC...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
3UTR-3UTR CCA 90 bp CAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGGGCTGGGAGATGGCTTCTGGTaGGGGGCCTGCGGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: QAPLCLCASWLQLAERGLGDGFW*GACGRA
Trigger: TGCCCTGCCGCAGGCCCCCCACCAGAAGCCATCTCC...CAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAAGGAGATGGCTTCTGGTaGGGGGCCTGCGGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQGDGFW*GACGRA
Trigger: TGCCCTGCCGCAGGCCCCCCACCAGAAGCCATCTCC...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGAGGGCCCCTGGTCAGTaGCCGAGCAGCCGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: NPALSPSPVREVSAGHGLRAPGQ*PSSRGC
Trigger: GCAGCCGCGGCTGCTCGGCCACTGACCAGGGGCCCT...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAACCTGGGCAGGCCTGCTaGTGCTGCTTGGTCACTCTG +
Preference number: 2 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQPGQAC*CCLVTL
Trigger: CAGAGTGACCAAGCAGCACCAGCAGGCCTGCCCAGG...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp AAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCTATCTGTCTGCCAGGGCCCCTaGTCAGTGGCCGAGCAGCCG +
Preference number: 2 (lower is better)
Translates to: KVFHGAHVRRPGRPTLLSVCQGP*SVAEQP
Trigger: CGGCTGCTCGGCCACTGACCAGGGGCCCTGGCAGAC...AGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 90 bp GGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTaGTCACTGTACAGACCTCTTCAGTGGGGAGCTGTCTGCTTGCCT +
Preference number: 2 (lower is better)
Translates to: GALLWLHLCPCCRPG*SLYRPLQWGAVCLP
Trigger: AGGCAAGCAGACAGCTCCCCACTGAAGAGGTCTGTACAGTGACAACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTACCCTGGACCCCTGTTaGGGTAGGAGAAGTAGACGT +
Preference number: 2 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGTLDPC*GRRSRR
Trigger: ACGTCTACTTCTCCTACCTCAACAGGGGTCCAGGGT...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAATCCCTCCATGTGCCCTaGAGCAGCCACGGTACCTTT +
Preference number: 2 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQSLHVP*SSHGTF
Trigger: AAAGGTACCGTGGCTGCTGCAGGGCACATGGAGGGA...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGCTTCTTGGCTCCAGCTaGCAGAACGAGGGCTGTGCA +
Preference number: 2 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWLLGSS*QNEGCA
Trigger: TGCACAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAG...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 90 bp GACCCTGGGCCGAGCAACCTCTGGTCATGGCCGGTGGTGCTGAGCTaGGGGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATT +
Preference number: 2 (lower is better)
Translates to: DPGPSNLWSWPVVLS*GTGPHILALYILWI
Trigger: AATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCCCCAAGCTCAGCACCACCGGCCATGACCAGAGGTTGCTCGGCCCAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTCCAGTGGGGCAAGGATaGGACATGCTTATGTGGGAT +
Preference number: 2 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGPVGQG*DMLMWD
Trigger: ATCCCACATAAGCATGTCTCATCCTTGCCCCACTGG...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGAGACCACAGGGGCCATaGGCATTCCGGCCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: ECSRAILGHPVAITDPVLRPQGP*AFRPPR
Trigger: CCTTGGAGGCCGGAATGCTCATGGCCCCTGTGGTCT...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCACCGAGCAGCCGCGGCTaGAGGGGAGAGTGGAGCAAT +
Preference number: 2 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAPSSRG*RGEWSN
Trigger: ATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp GCCTCTCCCCTTTCTAATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTCTGCGAGGGCCTACCTaGAGGACTCTGGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: ASPLSNPALSPSPVREVSLRGPT*RTLGGT
Trigger: TGTCCCTCCCAGAGTCCTTCAGGTAGGCCCTCGCAG...AGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp GCCTCTCCCCTTTCTAATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTCAAGGCGTGCTGTCCTaGAGGCTCTGGGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: ASPLSNPALSPSPVREVSQGVLS*RLWAGT
Trigger: TGTGCCTGCCCAGAGCCTGCAGGACAGCACGCCTTG...AGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGGTAGGTCCCTCCATGTaGCCTGCAGCAGCCACGGTA +
Preference number: 2 (lower is better)
Translates to: ECSRAILGHPVAITDPVLVGPSM*PAAATV
Trigger: TACCGTGGCTGCTGCAGGGCACATGGAGGGACCTAC...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGACATCACAGTATGGGTaGCACTGTACAGCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWTSQYG*HCTAGA
Trigger: GGCTCCTGCTGTACAGTGCCACCCATACTGTGATGT...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCACCCTTGGGGCTCCTGTaGGAGGAAGGAGCTGCTTCC +
Preference number: 2 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAPLGLL*EEGAAS
Trigger: GGAAGCAGCTCCTTCCTCCCACAGGAGCCCCAAGGG...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGCTACCTGAAGGACTCTaGGAGGGACACAAGGGCTTT +
Preference number: 2 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWLPEGL*EGHKGF
Trigger: AAAGCCCTTGTGTCCCTCCCAGAGTCCTTCAGGTAG...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGGTCCCCCAGCAACATTaGGCACATGGATCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: ECSRAILGHPVAITDPVLVPQQH*AHGSPW
Trigger: CCAGGGAGATCCATGTGCTCAATGTTGCTGGGGGAC...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCACCACGGCACAGTGGATaGACAGACAGACCAGCGGAG +
Preference number: 2 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAPRHSG*TDRPAE
Trigger: CTCCGCTGGTCTGTCTGTGCATCCACTGTGCCGTGG...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp CAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGGGCTGGGTCACTCTGGGCATTaGCTGAACTTTCATGGGTAT +
Preference number: 2 (lower is better)
Translates to: QAPLCLCASWLQLAERGLGHSGH*LNFHGY
Trigger: ATACCCATGAAAGTTCAGCCAATGCCCAGAGTGACC...CAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGGGCCCATTCTGGGGCTaGCCCTGGGAGGATGTGCAG +
Preference number: 2 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMGPFWG*PWEDVQ
Trigger: CTGCACATCCTCCCAGGGCCAGCCCCAGAATGGGCC...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 90 bp CAGTGCCCCACAGACCCTGGCCTGTTGTTGACCATAACACTAGCTTaGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGC +
Preference number: 2 (lower is better)
Translates to: QCPTDPGLLLTITLA*ATKARDTYAWKCAC
Trigger: GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTCAACAACAGGCCAGGGTCTGTGGGGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR-3UTR TCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGGGGAGAGTGGAGCAATaGTGCGCCTGGGGACACACA +
Preference number: 2 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWGRVEQ*CAWGHT
Trigger: TGTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCC...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGATTATGCCCAAGGCCTaGGGCAAGCTCAAGCCTGCT +
Preference number: 2 (lower is better)
Translates to: ECSRAILGHPVAITDPVLIMPKA*GKLKPA
Trigger: AGCAGGCTTGAGCTTGCCCCAGGCCTTGGGCATAAT...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGGAGTTCACTGCACCCTaGACCCCTGTTGAGGTAGGA +
Preference number: 2 (lower is better)
Translates to: ECSRAILGHPVAITDPVLEFTAP*TPVEVG
Trigger: TCCTACCTCAACAGGGGTCCAGGGTGCAGTGAACTC...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 90 bp TGGTCATGGCCGGTGGTGCTGAGCTTGGGGACAGGGCCACACATTTaGGCTCTCTACATACTCTGGATTCTATACAATCACGCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: WSWPVVLSLGTGPHI*ALYILWILYNHAGH
Trigger: GTGGCCAGCGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCCCCAAGCTCAGCACCACCGGCCATGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 90 bp GTAGGAGAAGTAGACGTTGGGAGCAAGGATCCTCTCCTAATTTTGTaGCATCCCCTCAGTGCCCAGCACAGCTCCGGATACAGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: VGEVDVGSKDPLLIL*HPLSAQHSSGYRAG
Trigger: ACCTGCCCTGTATCCGGAGCTGTGCTGGGCACTGAGGGGATGCAACAAAATTAGGAGAGGATCCTTGCTCCCAACGTCTACTTCTCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 90 bp GAGGTAGGAGAAGTAGACGTTGGGAGCAAGGATCCTCTCCTAATTTaGTTGCATCCCCTCAGTGCCCAGCACAGCTCCGGATACAGGGCA +
Preference number: 2 (lower is better)
Translates to: EVGEVDVGSKDPLLI*LHPLSAQHSSGYRA
Trigger: TGCCCTGTATCCGGAGCTGTGCTGGGCACTGAGGGGATGCAACAAAATTAGGAGAGGATCCTTGCTCCCAACGTCTACTTCTCCTACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATAGCTGTGCCTCCTGGTaGCCCTGCCGAAGTGTCAGC +
Preference number: 2 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNSCASW*PCRSVS
Trigger: GCTGACACTTCGGCAGGGTCACCAGGAGGCACAGCT...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGGCTGCCTAAAGTGCTaGCGGGAGTGGGGAGACCAC +
Preference number: 2 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNGCLKC*REWGDH
Trigger: GTGGTCTCCCCACTCCCGGCAGCACTTTAGGCAGCC...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGGCACATGGATCTCCCTaGCCAGACAGGGCTGGGGTT +
Preference number: 2 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMAHGSP*PDRAGV
Trigger: AACCCCAGCCCTGTCTGGCCAGGGAGATCCATGTGC...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 90 bp GAGTCAAACAAAGTCACAAGTGCCTCTCCCCTTTCTAATCCAGCTTaGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTG +
Preference number: 2 (lower is better)
Translates to: ESNKVTSASPLSNPA*SPSPVREVSAGHGL
Trigger: CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGCACTTGTGACTTTGTTTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp CAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGGGCTGTACAATAAATACAACTaGTCCCCTAATGTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: QAPLCLCASWLQLAERGLYNKYN*SPNVCQ
Trigger: CTGGCAGACATTAGGGGATCAGTTGTATTTATTGTA...CAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCTTCATGGTGCCCATGTaGGAAGGCCTGGGCGTCCTA +
Preference number: 2 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETFMVPM*EGLGVL
Trigger: TAGGACGCCCAGGCCTTCTCACATGGGCACCATGAA...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTAAGTCCATGTCACACTaGACAAATTACATATGTCCC +
Preference number: 2 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGKSMSH*TNYICP
Trigger: GGGACATATGTAATTTGTGCAGTGTGACATGGACTT...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGGCCCTGGGAGGATGTaGAGGGTTTCAACCACCTGC +
Preference number: 2 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNGPGRM*RVSTTC
Trigger: GCAGGTGGTTGAAACCCTGCACATCCTCCCAGGGCC...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGCCTGGGCAGGCCTGCTaGTGCTGCTTGGTCACTCTG +
Preference number: 2 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITPGQAC*CCLVTL
Trigger: CAGAGTGACCAAGCAGCACCAGCAGGCCTGCCCAGG...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGCTGAAAACAGGGGGATaGATTCATAAACTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWLKTGG*IHKLSS
Trigger: TGAGGAGAGTTTATGAATCCATCCCCCTGTTTTCAG...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATCCAAGGGCCAAGAACTaGGTTCACTGCACCCTGGAC +
Preference number: 2 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNPRAKN*VHCTLD
Trigger: GTCCAGGGTGCAGTGAACTCAGTTCTTGGCCCTTGG...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTCACTGACCCAGTCCTaGTGGAGCCTTACTGTGGCT +
Preference number: 2 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMSLTQS*WSLTVA
Trigger: AGCCACAGTAAGGCTCCATCAGGACTGGGTCAGTGA...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCACCACTGTGTGGTaGCTCCTTAAGTTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMCTTVW*LLKLPQ
Trigger: CTGGGGCAACTTAAGGAGGCACCACACAGTGGTGCA...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR-3UTR CCA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGTGCATGCATCTACAGTaGAGACCCAATCACCATTAC +
Preference number: 2 (lower is better)
Translates to: NPALSPSPVREVSAGHGLCMHLQ*RPNHHY
Trigger: GTAATGGTGATTGGGTCTCCACTGTAGATGCATGCA...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 90 bp AGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTaGAGACCACCAGAGAAATTCAAGGCCGGTGGGTGTGTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: RSARQKILESALVLV*RPPEKFKAGGCVAE
Trigger: TTCTGCCACACACCCACCGGCCTTGAATTTCTCTGGTGGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 90 bp TACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTaGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: YAWKCACTTVWCLLK*PQTPDGQRKGECPG
Trigger: ACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR-3UTR TCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTGGGAGAGTGGAGCAATaGTGCGCCTGGGGACACACA +
Preference number: 2 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPGRVEQ*CAWGHT
Trigger: TGTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCC...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCCATCCTGGGCAGGCCTaGTGGTGCTGCTTGGTCACT +
Preference number: 2 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSHPGQA*WCCLVT
Trigger: AGTGACCAAGCAGCACCAGCAGGCCTGCCCAGGATG...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCCCACGGCACAGTGGATaGACAGACAGACCAGCGGAG +
Preference number: 2 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSPRHSG*TDRPAE
Trigger: CTCCGCTGGTCTGTCTGTGCATCCACTGTGCCGTGG...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTTGTGCCTCCCAGAGCTaGTGTTCCTCCAGTCGGGCT +
Preference number: 2 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPCASQS*CSSSRA
Trigger: AGCCCGACTGGAGGAACAGCAGCTCTGGGAGGCACA...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATCTCCAAACTCCTTCCTaGATGCTGGCCTCACTCCAC +
Preference number: 2 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNLQTPS*MLASLH
Trigger: GTGGAGTGAGGCCAGCATGCAGGAAGGAGTTTGGAG...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGATCGACATCACAGTATaGGTGGCACTGTACAGCAGG +
Preference number: 2 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWIDITV*VALYSR
Trigger: CCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATTGGGCGGTACTGGCATaGGAGGCTCTTTTGCAAACC +
Preference number: 2 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNWAVLA*EALLQT
Trigger: GGTTTGCAAAAGAGCCTCCCATGCCAGTACCGCCCA...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 90 bp CATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTaGCAAACCAGGATAATTAAATCCTCTGGGGCTTTAATTCTTACT +
Preference number: 2 (lower is better)
Translates to: HSGLQGWAVLAWEAL*QTRIIKSSGALILT
Trigger: AGTAAGAATTAAAGCCCCAGAGGATTTAATTATCCTGGTTTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGGCTTTCATTCATCCATaGATCCTCACCCAAGGGCCA +
Preference number: 2 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMAFIHP*ILTQGP
Trigger: TGGCCCTTGGGTGAGGATTCATGGATGAATGAAAGC...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGCATGGCTCCTTAGTATaGGGTGTTTGGTGGGGAATG +
Preference number: 2 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMHGSLV*GVWWGM
Trigger: CATTCCCCACCAAACACCCCATACTAAGGAGCCATG...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR-3UTR TCA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGTTCTTATTGACCCCATaGCGGCTTTTACAAATCATA +
Preference number: 2 (lower is better)
Translates to: NPALSPSPVREVSAGHGLFLLTP*RLLQII
Trigger: TATGATTTGTAAAAGCCGTCATGGGGTCAATAAGAA...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGGCAGAACGAGGGCTGTaGACTCTGCTTGCCCATTTT +
Preference number: 2 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITAERGL*TLLAHF
Trigger: AAAATGGGCAAGCAGAGTGCACAGCCCTCGTTCTGC...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTTCATTCCCTGGGACTaGTTTCTTTCTCGGCTAAAG +
Preference number: 2 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMFIPWD*FLSRLK
Trigger: CTTTAGCCGAGAAAGAAACCAGTCCCAGGGAATGAA...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTGCTTTCATTCATCCATaGATCCTCACCCAAGGGCCA +
Preference number: 2 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPAFIHP*ILTQGP
Trigger: TGGCCCTTGGGTGAGGATTCATGGATGAATGAAAGC...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCGAACGAAGGCTCAGGTaGCCTGGAAGAAAGTGTTTC +
Preference number: 2 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSERRLR*PGRKCF
Trigger: GAAACACTTTCTTCCAGGCCACCTGAGCCTTCGTTC...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTCAGGGCCACACATTTTaGCTCTCTACATACTCTGGA +
Preference number: 2 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPQGHTF*LSTYSG
Trigger: TCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTG...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTAAGGCTCAGGTGGCCTaGAAGAAAGTGTTTCATGGT +
Preference number: 2 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPKAQVA*KKVFHG
Trigger: ACCATGAAACACTTTCTTCCAGGCCACCTGAGCCTT...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR GCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATATCATAAGCAAAAACTaGAGTCAGACTCTACTCAGA +
Preference number: 2 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNIISKN*SQTLLR
Trigger: TCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTGCTCTCTACATACTCTaGATTCTATACAATCACGCT +
Preference number: 2 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPALYIL*ILYNHA
Trigger: AGCGTGATTGTATAGAATCCAGAGTATGTAGAGAGC...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 90 bp CTGCTTGGTCACTCTGGGCATTGGCTGAACTTTCATGGGTATAAATaGTCTATCAAGAGATTATTCACAACCAAACTTAAGGACCCACTA +
Preference number: 2 (lower is better)
Translates to: LLGHSGHWLNFHGYK*SIKRLFTTKLKDPL
Trigger: TAGTGGGTCCTTAAGTTTGGTTGTGAATAATCTCTTGATAGACAATTTATACCCATGAAAGTTCAGCCAATGCCCAGAGTGACCAAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR TCA 90 bp GAAGAAAGAGAAATGGTTAAGTACTTAAACTGTCCACTGACACCTGCTTATGAAACTCTGGGCATTGGCTaGACTTTCATGGGTATAAAT +
Preference number: 2 (lower is better)
Translates to: EEREMVKYLNCPLTPAYETLGIG*TFMGIN
Trigger: ATTTATACCCATGAAAGTTCAGCCAATGCCCAGAGT...TTCATAAGCAGGTGTCAGTGGACAGTTTAAGTACTTAACCATTTCTCTTTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp CAGCTCCCAGACCCTGGGCCGAGCAACCTCTGGTCATaGCCGGTGGTGCTGAGCTTGGGGACAGGGCCACAC +
Preference number: 3 (lower is better)
Translates to: QLPDPGPSNLWS*PVVLSLGTGPH
Trigger: GTGTGGCCCTGTCCCCAAGCTCAGCACCACCGGCCATGACCAGAGGTTGCTCGGCCCAGGGTCTGGGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp CCGAAGTGTCAGCCTGTTAGCCCAGCTCCCAGACCCTaGGCCGAGCAACCTCTGGTCATGGCCGGTGGTGCT +
Preference number: 3 (lower is better)
Translates to: PKCQPVSPAPRP*AEQPLVMAGGA
Trigger: AGCACCACCGGCCATGACCAGAGGTTGCTCGGCCCAGGGTCTGGGAGCTGGGCTAACAGGCTGACACTTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CAA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTGTGTCTCTGTGCTTCTaGGCTCCAGCTGGCAGAACG +
Preference number: 3 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGVSLCF*APAGRT
Trigger: CGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACAC...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 72 bp TCTGTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTaGTGTCCTGCAGGCTCTGGGCAGGCACAAGGTCCT +
Preference number: 3 (lower is better)
Translates to: SVKKGQASDLKA*CPAGSGQAQGP
Trigger: AGGACCTTGTGCCTGCCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CAA 90 bp GTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGGGCTGTGCACTCTGCTaGCCCATTTTCCCAGCATTC +
Preference number: 3 (lower is better)
Translates to: VKKGQASDLKACCPAGSGGCALC*PIFPAF
Trigger: GAATGCTGGGAAAATGGGCAAGCAGAGTGCACAGCC...CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CAA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGAGGGTGAGTGCTCCCTaGGGGCTCCTGTGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: NPALSPSPVREVSAGHGLRVSAP*GLLWEE
Trigger: TTCCTCCCACAGGAGCCCCAAGGGAGCACTCACCCT...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp GCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATaGGCATCGACATCACAGTATGGGTGGCACTGTACA +
Preference number: 3 (lower is better)
Translates to: AGQAGRGWASFT*ASTSQYGWHCT
Trigger: TGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
3UTR CCA 72 bp AGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTaGGCATGGGCTGAAGGACAAGCAGACCACAGGGGC +
Preference number: 3 (lower is better)
Translates to: SFEPVSSQRGIC*AWAEGQADHRG
Trigger: GCCCCTGTGGTCTGCTTGTCCTTCAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CAA 90 bp TGGAAGAAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGAGGGTGAGTGCTCCCTaGGGGCTCCTGTGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: WKKVFHGAHVRRPGRPTLRVSAP*GLLWEE
Trigger: TTCCTCCCACAGGAGCCCCAAGGGAGCACTCACCCT...CAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 72 bp CCTGCTATCTACATCTGTAAAGAAGGGCCAGGCCTCTaGCCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGCA +
Preference number: 3 (lower is better)
Translates to: PAIYICKEGPGL*PQGVLSCRLWA
Trigger: TGCCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGATGTAGATAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 72 bp ACTGCACAAATTACATATGTCCCACGGCACAGTGGATaGACAGACAGACCAGCGGAGCTGAGGGGCAGGCGC +
Preference number: 3 (lower is better)
Translates to: TAQITYVPRHSG*TDRPAELRGRR
Trigger: GCGCCTGCCCCTCAGCTCCGCTGGTCTGTCTGTGCATCCACTGTGCCGTGGGACATATGTAATTTGTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 72 bp GATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTaGCGGCCCGGGTTGTCACTGTACAGACCTCTTCAG +
Preference number: 3 (lower is better)
Translates to: DGALLWLHLCPC*RPGLSLYRPLQ
Trigger: CTGAAGAGGTCTGTACAGTGACAACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 72 bp CCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTaGTGCCGGCCCGGGTTGTCACTGTACAGACCTCTT +
Preference number: 3 (lower is better)
Translates to: PDGALLWLHLCP*CRPGLSLYRPL
Trigger: AAGAGGTCTGTACAGTGACAACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp GCCTCATTCACATGGGCATCGACATCACAGTATGGGTaGCACTGTACAGCAGGAGCCTCACTCTGGCCGCAG +
Preference number: 3 (lower is better)
Translates to: ASFTWASTSQYG*HCTAGASLWPQ
Trigger: CTGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
3UTR CCA 72 bp GTGGGCCTCATTCACATGGGCATCGACATCACAGTATaGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCC +
Preference number: 3 (lower is better)
Translates to: VGLIHMGIDITV*VALYSRSLTLA
Trigger: GGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
3UTR-3UTR CAA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGGCAGGGATGCACGGGTaGTTTCTGAGCAAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: NPALSPSPVREVSAGHGLAGMHG*FLSKQH
Trigger: ATGCTGCTTGCTCAGAAACAACCCGTGCATCCCTGC...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 72 bp AGGAACACAGCTATTCAGATCCAATTGGGAGGAGGGTaGGTGCTCCCTTGGGGCTCCTGTGGGAGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: RNTAIQIQLGGG*VLPWGSCGRKE
Trigger: CTCCTTCCTCCCACAGGAGCCCCAAGGGAGCACTCACCCTCCTCCCAATTGGATCTGAATAGCTGTGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp AATTCAAGGCCGGTGGGTGTGTGGCAGAACCAGAACTaGAACCCATGTCTTCTGCCCCTGAGACCTGCACTC +
Preference number: 3 (lower is better)
Translates to: NSRPVGVWQNQN*NPCLLPLRPAL
Trigger: GAGTGCAGGTCTCAGGGGCAGAAGACATGGGTTCCAGTTCTGGTTCTGCCACACACCCACCGGCCTTGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp CTCACCCAAGGGCCAAGAACTGAGTTCACTGCACCCTaGACCCCTGTTGAGGTAGGAGAAGTAGACGTTGGG +
Preference number: 3 (lower is better)
Translates to: LTQGPRTEFTAP*TPVEVGEVDVG
Trigger: CCCAACGTCTACTTCTCCTACCTCAACAGGGGTCCAGGGTGCAGTGAACTCAGTTCTTGGCCCTTGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CAA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGGCAGGGATGCACGGGTaGTTTCTGAGCAAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: ECSRAILGHPVAITDPVLAGMHG*FLSKQH
Trigger: ATGCTGCTTGCTCAGAAACAACCCGTGCATCCCTGC...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CAA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGCCTCTCCTAATTTTGTaGCATCCCCTCAGTGCCCAG +
Preference number: 3 (lower is better)
Translates to: NPALSPSPVREVSAGHGLPLLIL*HPLSAQ
Trigger: CTGGGCACTGAGGGGATGCAACAAAATTAGGAGAGG...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 72 bp TCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTaGTGGAGCCTTACTGTGGCTGCATCTGTGTCCTTG +
Preference number: 3 (lower is better)
Translates to: SLAILLPSLTQS*WSLTVAASVSL
Trigger: CAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp TCACACTGCACAAATTACATATGTCCCACGGCACAGTaGATGCACAGACAGACCAGCGGAGCTGAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: SHCTNYICPTAQ*MHRQTSGAEGQ
Trigger: CTGCCCCTCAGCTCCGCTGGTCTGTCTGTGCATCCACTGTGCCGTGGGACATATGTAATTTGTGCAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp GCAGCCACGGTACCTTTTCTACCATATGGGAGTCAGTaGGCTGATGGGCTGGTGATAAGAAACAGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: AATVPFLPYGSQ*ADGLVIRNREG
Trigger: CCCCTCCCTGTTTCTTATCACCAGCCCATCAGCCCACTGACTCCCATATGGTAGAAAAGGTACCGTGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp GTGCTGCCGGGAGTGGGGAGACCACCATTCATTCCCTaGGACTGGTTTCTTTCTCGGCTAAAGCTAGAAGGA +
Preference number: 3 (lower is better)
Translates to: VLPGVGRPPFIP*DWFLSRLKLEG
Trigger: TCCTTCTAGCTTTAGCCGAGAAAGAAACCAGTCCCAGGGAATGAATGGTGGTCTCCCCACTCCCGGCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp GACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTaGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGT +
Preference number: 3 (lower is better)
Translates to: DTYAWKCACTTV*CLLKLPQTPDG
Trigger: ACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR TCA 72 bp AGCTTGAATCTGCACCAGAGGCTTGGACCAAAGAACTaGCCTACCCATGTGAGCATGCCCCTAGCTGTGCCT +
Preference number: 3 (lower is better)
Translates to: SLNLHQRLGPKN*PTHVSMPLAVP
Trigger: AGGCACAGCTAGGGGCATGCTCACATGGGTAGGTCAGTTCTTTGGTCCAAGCCTCTGGTGCAGATTCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 72 bp CACGGTACCTTTTCTACCATATGGGAGTCAGTGGGCTaGTGGGCTGGTGATAAGAAACAGGGAGGGGGCGTA +
Preference number: 3 (lower is better)
Translates to: HGTFSTIWESVG*WAGDKKQGGGV
Trigger: TACGCCCCCTCCCTGTTTCTTATCACCAGCCCATCAGCCCACTGACTCCCATATGGTAGAAAAGGTACCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 72 bp AAGTCACAAGTGCCTCTCCCCTTTCTAATCCAGCTTTaGGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: KSQVPLPFLIQL*ARLQSERYLLG
Trigger: GCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGCACTTGTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 72 bp CAAGGATCCTCTCCTAATTTTGTTGCATCCCCTCAGTaGCCAGCACAGCTCCGGATACAGGGCAGGTTCACA +
Preference number: 3 (lower is better)
Translates to: QGSSPNFVASPQ*PAQLRIQGRFT
Trigger: TGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCACTGAGGGGATGCAACAAAATTAGGAGAGGATCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 72 bp ACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTaGCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAA +
Preference number: 3 (lower is better)
Translates to: TYAWKCACTTVW*LLKLPQTPDGQ
Trigger: TTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR CCA 72 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATaGGAGGCTCTTTTGCAAACCAGGATAATTAAATCC +
Preference number: 3 (lower is better)
Translates to: EHSGLQGWAVLA*EALLQTRIIKS
Trigger: GGATTTAATTATCCTGGTTTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 72 bp AGGCACAAGGTCCTCCTCTCACCAGTGGGGCAAGGATaGGACATGCTTATGTGGGATCAGGAACACAGCTAT +
Preference number: 3 (lower is better)
Translates to: RHKVLLSPVGQG*DMLMWDQEHSY
Trigger: ATAGCTGTGTTCCTGATCCCACATAAGCATGTCTCATCCTTGCCCCACTGGTGAGAGGAGGACCTTGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp CTCAAATCCAAGAGAAGCACAGCAAGCCAGGGATCATaGGCTCAGAGGTCAGCCAGGCAGAAGATTCTAGAG +
Preference number: 3 (lower is better)
Translates to: LKSKRSTASQGS*AQRSARQKILE
Trigger: CTCTAGAATCTTCTGCCTGGCTGACCTCTGAGCCCATGATCCCTGGCTTGCTGTGCTTCTCTTGGATTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CAA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAATTACTCCAGTTTGTCTaGAAAATCCTTGGTGAAAAC +
Preference number: 3 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQLLQFV*KILGEN
Trigger: GTTTTCACCAAGGATTTTCAAGACAAACTGGAGTAA...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CAA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGGTTCTAGAGCCATCCTaGGCCATCCTGTTGCCATCA +
Preference number: 3 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMVLEPS*AILLPS
Trigger: TGATGGCAACAGGATGGCCAAGGATGGCTCTAGAAC...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 72 bp AACCACCTGCCATTTCCCCAGAAGCAAGAAAGCCTCTaGGGTTGGAGTGAACACTGCATGCATCTACAGTGG +
Preference number: 3 (lower is better)
Translates to: NHLPFPQKQESL*GWSEHCMHLQW
Trigger: CCACTGTAGATGCATGCAGTGTTCACTCCAACCTCAGAGGCTTTCTTGCTTCTGGGGAAATGGCAGGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 72 bp ATCACAGCAAACACTCTCTCCAAACTCCTTCCTGCATaGTGGCCTCACTCCACTCTCAGGTTCCTAGAACCA +
Preference number: 3 (lower is better)
Translates to: ITANTLSKLLPA*WPHSTLRFLEP
Trigger: TGGTTCTAGGAACCTGAGAGTGGAGTGAGGCCAGCATGCAGGAAGGAGTTTGGAGAGAGTGTTTGCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CAA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACATGGTCACTCTGGGCATaGGCTGAACTTTCATGGGTA +
Preference number: 3 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTWSLWA*AELSWV
Trigger: TACCCATGAAAGTTCAGCCAATGCCCAGAGTGACCA...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CAA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTGGTCCCCCAGCAACATaGAGCACATGGATCTCCCTG +
Preference number: 3 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPGPPAT*STWISL
Trigger: CAGGGAGATCCATGTGCTCAATGTTGCTGGGGGACC...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 72 bp CAGCATTCCCCCAGAGCCCCATGCATCCATCAGAAGTaGAATCAAGAAGAAATCTGCTTTCAGCATCCTGGG +
Preference number: 3 (lower is better)
Translates to: QHSPRAPCIHQK*NQEEICFQHPG
Trigger: CCCAGGATGCTGAAAGCAGATTTCTTCTTGATTTCACTTCTGATGGATGCATGGGGCTCTGGGGGAATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 72 bp ACTAGTGTAAGGGGTGTGGGAGAAGGCAGAGGTCCCTaGAAACAGGGGGATGGATTCATAAACTCTCCTCAA +
Preference number: 3 (lower is better)
Translates to: TSVRGVGEGRGP*KQGDGFINSPQ
Trigger: TTGAGGAGAGTTTATGAATCCATCCCCCTGTTTTCAGGGACCTCTGCCTTCTCCCACACCCCTTACACTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 72 bp AACTGCAAAGTTGGGGTTAAGTTAGAGTCTAGGAACTaGAGTCATGCACAGCTGGCGACCAGCCAAAGGCAT +
Preference number: 3 (lower is better)
Translates to: NCKVGVKLESRN*SHAQLATSQRH
Trigger: ATGCCTTTGGCTGGTCGCCAGCTGTGCATGACTGCAGTTCCTAGACTCTAACTTAACCCCAACTTTGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 72 bp AATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTaGCCCAGACTCCAGATGGTCAAAGAAAAGGTGAAT +
Preference number: 3 (lower is better)
Translates to: NVPAPLCGASLS*PRLQMVKEKVN
Trigger: ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR CCA 72 bp GCAGGCCTGCTGGTGCTGCTTGGTCACTCTGGGCATTaGCTGAACTTTCATGGGTATAAATTGTCTATCAAG +
Preference number: 3 (lower is better)
Translates to: AGLLVLLGHSGH*LNFHGYKLSIK
Trigger: CTTGATAGACAATTTATACCCATGAAAGTTCAGCCAATGCCCAGAGTGACCAAGCAGCACCAGCAGGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CAA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATCTTTCTAATCCAGCTTaGAGCCCGTCTCCAGTCAGA +
Preference number: 3 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNLSNPA*SPSPVR
Trigger: TCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAG...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR GCA 72 bp AGCAAGAAAGCCTCTGAGGTTGGAGTGAACACTGCATaGATCTACAGTGGAGACCCAATCACCATTACAGAC +
Preference number: 3 (lower is better)
Translates to: SKKASEVGVNTA*IYSGDPITITD
Trigger: GTCTGTAATGGTGATTGGGTCTCCACTGTAGATGCATGCAGTGTTCACTCCAACCTCAGAGGCTTTCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp GGCTCTCTACATACTCTGGATTCTATACAATCACGCTaGCCACACATGACAGACACAAGGCACAACACATCC +
Preference number: 3 (lower is better)
Translates to: GSLHTLDSIQSR*PHMTDTRHNTS
Trigger: GGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTGTATAGAATCCAGAGTATGTAGAGAGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CCA 72 bp GAAGAAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTaGGCGTCCTACCCTGCTATCTACATCTGTAAAGAA +
Preference number: 3 (lower is better)
Translates to: EESVSWCPCEKA*ASYPAIYICKE
Trigger: TTCTTTACAGATGTAGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 72 bp GCCTGCTGGTGCTGCTTGGTCACTCTGGGCATTGGCTaGACTTTCATGGGTATAAATTGTCTATCAAGAGAT +
Preference number: 3 (lower is better)
Translates to: ACWCCLVTLGIG*TFMGINCLSRD
Trigger: ATCTCTTGATAGACAATTTATACCCATGAAAGTTCAGCCAATGCCCAGAGTGACCAAGCAGCACCAGCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR TCA 72 bp ATACTCTGGATTCTATACAATCACGCTGGCCACACATaGCAGACACAAGGCACAACACATCCATTAGGACAG +
Preference number: 3 (lower is better)
Translates to: ILWILYNHAGHT*QTQGTTHPLGQ
Trigger: CTGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTGTATAGAATCCAGAGTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR-3UTR CAA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCGCTCTTGTTCTTGTCTaGAGACCACCAGAGAAATTC +
Preference number: 3 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSALVLV*RPPEKF
Trigger: GAATTTCTCTGGTGGTCTCAAGACAAGAACAAGAGC...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCATGGCCGGTGGTGCTaGGCTTGGGGACAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHHGRWC*AWGQGH
Trigger: GTGGCCCTGTCCCCAAGCTCAGCACCACCGGCCATG...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACACAGACCAGCGGAGCTaGGGGGCAGGCGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHTDQRS*GAGASV
Trigger: CACAGAGGCGCCTGCCCCTCAGCTCCGCTGGTCTGT...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACAAGCTGTGCCTCCTGGTaGCCCTGCCGAAGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTSCASW*PCRSVS
Trigger: GCTGACACTTCGGCAGGGTCACCAGGAGGCACAGCT...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCACCGGCTGGTAGGTTaGGGACGGGGACCTGGGATA +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHHRLVG*GRGPGI
Trigger: TATCCCAGGTCCCCGTCCCCAACCTACCAGCCGGTG...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp CTAATGTCTGCCAGGGCCCCTGGTCAGTGGCCGAGCAGCCGCGGCTGCAGGGGAACCTCATCCTGCAGATaGAAGACCGCCGCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LMSARAPGQWPSSRGCRGTSSCR*KTAASP
Trigger: TGGGCTCGCGGCGGTCTTTCATCTGCAGGATGAGGT...TCCCCTGCAGCCGCGGCTGCTCGGCCACTGACCAGGGGCCCTGGCAGACATTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACGTAGGAAGAGGGGTCTaGCGGGTAGGTGTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDVGRGV*RVGVAR
Trigger: ACGAGCCACACCTACCCGGCAGACCCCTCTTCCTAC...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACCTCTGCTGGCCATGGTaGTGGCTTTGCCACTGCGAC +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDLCWPW*WLCHCD
Trigger: GTCGCAGTGGCAAAGCCAGCACCATGGCCAGCAGAG...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACATCTGACCTCAAGGCGTaGTGTCCTGCAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTSDLKA*CPAGSG
Trigger: CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGA...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACTGTGCCTCCCAGAGCTaGTGTTCCTCCAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDCASQS*CSSSRA
Trigger: AGCCCGACTGGAGGAACAGCAGCTCTGGGAGGCACA...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCCAGTGCGCTGCATGTaGGGACCATGTCGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHPVRCM*GPCRRA
Trigger: AGCTCTCCGACATGGTCCCCACATGCAGCGCACTGG...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACTCCGAGGGCCGCCCTTaGAACTGCCCGCTACTTTGT +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDSEGRP*NCPLLC
Trigger: ACAAAGTAGCGGGCAGTTCCAAGGGCGGCCCTCGGA...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACATCCGAGGGCCGCCCTTaGAACTGCCCGCTACTTTGT +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTSEGRP*NCPLLC
Trigger: ACAAAGTAGCGGGCAGTTCCAAGGGCGGCCCTCGGA...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATTGCTCACCGCTCTGCTaGCCATGGTGCTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHCSPLC*PWCWLC
Trigger: GCAAAGCCAGCACCATGGCCAGCAGAGCGGTGAGCA...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACCCTTGGGGCTCCTGTaGGAGGAAGGAGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTPLGLL*EEGAAS
Trigger: GGAAGCAGCTCCTTCCTCCCACAGGAGCCCCAAGGG...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACCCATGCGGAGGATGGTaGGCTTGTCTGGCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHPCGGW*ACLASE
Trigger: CTCGGAAGCCAGACAAGCTCACCATCCTCCGCATGG...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACACCTCATCCTGCAGATaGAAGACCGCCGCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHTSSCR*KTAASP
Trigger: TGGGCTCGCGGCGGTCTTTCATCTGCAGGATGAGGT...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACAGGGAGAGTGGAGCAATaGTGCGCCTGGGGACACACA +
Preference number: 4 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTGRVEQ*CAWGHT
Trigger: TGTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCC...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACTGGCTTCCGAGCCAGTaGGCTGCATGTGGGGACCAT +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHWLPSQ*AACGDH
Trigger: ATGGTCCCCACATGCAGCGCACTGGCTCGGAAGCCA...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACTCATGGACTTCATGTaGGAGACGGCCATGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTLMDFM*ETAMRR
Trigger: CCTCCGCATGGCCGTCTCGCACATGAAGTCCATGAG...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATACCGCCGCGAGCCCATaGACATCCTCATGGATGACT +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHTAASP*TSSWMT
Trigger: AGTCATCCATGAGGATGTGCATGGGCTCGCGGCGGT...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACGGCCGCCCTTGGAACTaGCCGCTACTTTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDGRPWN*PLLCPL
Trigger: AAGTGGACAAAGTAGCGGGCAGTTCCAAGGGCGGCC...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACGAGACCTGCACTCTGTaGCTCCCAGAGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDETCTL*LPELLF
Trigger: GAACAGCAGCTCTGGGAGGCACAGAGTGCAGGTCTC...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACGTAGGTCCCTCCATGTaGCCTGCAGCAGCCACGGTA +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHVGPSM*PAAATV
Trigger: TACCGTGGCTGCTGCAGGGCACATGGAGGGACCTAC...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACGATGGTGAGCTTGTCTaGCTTCCGAGCCAGTGCGCT +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDDGELV*LPSQCA
Trigger: AGCGCACTGGCTCGGAAGCCAGACAAGCTCACCATC...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGAGGGCCCCTGGTCAGTaGCCGAGCAGCCGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWRAPGQ*PSSRGC
Trigger: GCAGCCGCGGCTGCTCGGCCACTGACCAGGGGCCCT...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATTGTCCCACGGCACAGTaGATGCACAGACAGACCAGC +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHCPTAQ*MHRQTS
Trigger: GCTGGTCTGTCTGTGCATCCACTGTGCCGTGGGACA...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATAGGCCGGTGGGTGTGTaGCAGAACCAGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHRPVGV*QNQNWN
Trigger: GTTCCAGTTCTGGTTCTGCCACACACCCACCGGCCT...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACGAACCACTGAAGAGCTaGAGGCCTTCCCGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHEPLKS*RPSRSV
Trigger: GACACTCCGGGAAGGCCTTCAGCTCTTCAGTGGTTC...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATAGGCACATGAACCACTaGAGAGCTGAAGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHRHMNH*RAEGLP
Trigger: GGGAAGGCCTTCAGCTCTTCAGTGGTTCATGTGCCT...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATACCCTGGACCCCTGTTaGGGTAGGAGAAGTAGACGT +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHTLDPC*GRRSRR
Trigger: ACGTCTACTTCTCCTACCTCAACAGGGGTCCAGGGT...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCTCCCGCACAGCCTGTaGAACCTCCATTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHLPHSL*NLHFAT
Trigger: AGTGGCAAAATGGAGGTTTCACAGGCTGTGCGGGAG...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACATGACAAGGCCTGAATaGTGGAGCCGCAAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHMTRPE*WSRKEG
Trigger: GCCCTCCTTGCGGCTCCATCATTCAGGCCTTGTCAT...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533983.5
CDS-3UTR GCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACCAGGCCTGCTGGTGCTaGTTGGTCACTCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHQACWC*LVTLGI
Trigger: AATGCCCAGAGTGACCAAGCAGCACCAGCAGGCCTG...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACCTCCAAACTCCTTCCTaGATGCTGGCCTCACTCCAC +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDLQTPS*MLASLH
Trigger: GTGGAGTGAGGCCAGCATGCAGGAAGGAGTTTGGAG...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACTGTACGCGCCATCGGTaGACTTGTTCCCTGTACCCC +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHCTRHR*TCSLYP
Trigger: GGGGTACAGGGAACAAGTCCACCGATGGCGCGTACA...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACTGTCCCACGGCACAGTaGATGCACAGACAGACCAGC +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHCPTAQ*MHRQTS
Trigger: GCTGGTCTGTCTGTGCATCCACTGTGCCGTGGGACA...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTCCAGCTCCCAGACCCTaGGCCGAGCAACCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGPAPRP*AEQPLV
Trigger: GACCAGAGGTTGCTCGGCCCAGGGTCTGGGAGCTGG...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATTCCTCCTCTCACCAGTaGGGCAAGGATGAGACATGC +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHSSSHQ*GKDETC
Trigger: GCATGTCTCATCCTTGCCCCACTGGTGAGAGGAGGA...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGCCATTTCCGGAGGGTTaGCCGCCGCCGGGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVPFPEG*PPPGLP
Trigger: TGGCAACCCCGGCGGCGGTCAACCCTCCGGAAATGG...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303329.9
CDS-3UTR TCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACTCAGTTCCTGCTCTGTaGGGAAGGAAGGCTTGTACG +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDSVPAL*GRKACT
Trigger: CGTACAAGCCTTCCTTCCTCACAGAGCAGGAACTGA...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACATCACGCAGATGGCTTTaGTCCTCAGGGTGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTSRRWL*SSGWQN
Trigger: ATTCTGCCACCCTGAGGATCAAAGCCATCTGCGTGA...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACTCTGCCTGCTGTTGCTaGAGTTGCTTGACGTTGGTG +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDSACCC*SCLTLV
Trigger: CACCAACGTCAAGCAACTTCAGCAACAGCAGGCAGA...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp CTAATGTCTGCCAGGGCCCCTGGTCAGTGGCCGAGCAGCCGCGGCTGCAGGGGAAGGTATGGTCATTCCTaGTGGTGGCCAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LMSARAPGQWPSSRGCRGRYGHS*WWPGLD
Trigger: ATCAAGGCCTGGCCACCAGCAGGAATGACCATACCT...TCCCCTGCAGCCGCGGCTGCTCGGCCACTGACCAGGGGCCCTGGCAGACATTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACAAGGTATGGTCATTCCTaGTGGTGGCCAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTRYGHS*WWPGLD
Trigger: ATCAAGGCCTGGCCACCAGCAGGAATGACCATACCT...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACTACGCTTGGAAATGTaGCTGCACCACTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTLRLEM*LHHCVV
Trigger: CACCACACAGTGGTGCAGGCACATTTCCAAGCGTAG...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGTCCGGTGGCCGCCATaGGGGCAACGGGCAACGTCA +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVVRWPP*GQRATS
Trigger: TGACGTTGCCCGTTGCCCCCATGGCGGCCACCGGAC...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCTCCACGGGCAGGCATaGCCCCCGCCATCCTCACCT +
Preference number: 4 (lower is better)
Translates to: ASTSQYGWHCTAGASLWPLHGQA*PPPSSP
Trigger: AGGTGAGGATGGCGGGGGCCATGCCTGCCCGTGGAG...CGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACGTCTTCTTCAGGTATaGTCATTCCTGCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTRLLQV*SFLLVA
Trigger: GGCCACCAGCAGGAATGACCATACCTGAAGAAGACG...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACTTGGGGACGGGGACCTaGGATAAGTCATACGATGAC +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDLGTGT*DKSYDD
Trigger: GTCATCGTATGACTTATCCCAGGTCCCCGTCCCCAA...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACAACCCTGGAGTCCTGTTaGCAAGACTGGAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTTLESC*QDWSRH
Trigger: ATGCCTACTCCAGTCTTGCCAACAGGACTCCAGGGT...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CTGAGGGGCAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGCCAGTCCCCTGGGTTaGATCTCCTGGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRGRRLCVSVLLGSSWQNASPLG*ISWHGQ
Trigger: CTGCCCATGCCAGGAGATCCAACCCAGGGGACTGGC...GTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTGCCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACTCCTCCTCTCACCAGTaGGGCAAGGATGAGACATGC +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHSSSHQ*GKDETC
Trigger: GCATGTCTCATCCTTGCCCCACTGGTGAGAGGAGGA...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CTAATGTCTGCCAGGGCCCCTGGTCAGTGGCCGAGCAGCCGCGGCTGCAGGGGATGGCAGAACCAGAACTaGAACCCATGTCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LMSARAPGQWPSSRGCRGWQNQN*NPCLLP
Trigger: GGGCAGAAGACATGGGTTCCAGTTCTGGTTCTGCCA...TCCCCTGCAGCCGCGGCTGCTCGGCCACTGACCAGGGGCCCTGGCAGACATTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACGGTATCTGCTGGGCATaGGCTGAAGGACAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHGICWA*AEGQAD
Trigger: GTCTGCTTGTCCTTCAGCCCATGCCCAGCAGATACC...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATTGCGAAATCGATACATaGCCGACAGGACTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHCEIDT*PTGLGL
Trigger: AAGGCCAAGTCCTGTCGGTCATGTATCGATTTCGCA...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp CTGAGGGGCAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACCTGCTGGGCATGGGCTaGAGGACAAGCAGACCACAG +
Preference number: 4 (lower is better)
Translates to: LRGRRLCVSVLLGSSWQNLLGMG*RTSRPQ
Trigger: CTGTGGTCTGCTTGTCCTTCAGCCCATGCCCAGCAG...GTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTGCCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGGACCGCCGCCGGGGTTaGCATCTTGCTCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: ASTSQYGWHCTAGASLWPDRRRG*HLARRG
Trigger: TCCTCTCCGAGCAAGATGGCAACCCCGGCGGCGGTC...CGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303329.9
CDS-3UTR GCA 90 bp GGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACATGGCTTCCGAGCCAGTaGGCTGCATGTGGGGACCAT +
Preference number: 4 (lower is better)
Translates to: GRASRARVGLIHMGIDITWLPSQ*AACGDH
Trigger: ATGGTCCCCACATGCAGCGCACTGGCTCGGAAGCCA...TGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACCTCATGGATGACTGCTaGCCTTCTTTCTTGACCGTC +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDLMDDC*PSFLTV
Trigger: GACGGTCAAGAAAGAAGGGCAGCAGTCATCCATGAG...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGTGCTGGTGGGAGTGCTaGTCACCGCTCTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWCWWEC*SPLCWP
Trigger: TGGCCAGCAGAGCGGTGAGCAGCACTCCCACCAGCA...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATCCGAGCAGCCGCGGCTaGAGGGGAGAGTGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: GQAGRGWASFTWASTSQYPSSRG*RGEWSN
Trigger: ATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG...ATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGCCGAGCAGCCGCGGCTaGAGGGGAGAGTGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWPSSRG*RGEWSN
Trigger: ATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGTCTGACCTCAAGGCGTaGTGTCCTGCAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VKKGQASDLKACCPAGSGSDLKA*CPAGSG
Trigger: CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGA...CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACGAAAGTGTTTCATGGTaGCCATGTGAGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDESVSW*PCEKAW
Trigger: CCAGGCCTTCTCACATGGGCACCATGAAACACTTTC...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGGGCCCTGGGAGGATGTaGAGGGTTTCAACCACCTGC +
Preference number: 4 (lower is better)
Translates to: VKKGQASDLKACCPAGSGGPGRM*RVSTTC
Trigger: GCAGGTGGTTGAAACCCTGCACATCCTCCCAGGGCC...CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCACTCCACGGGCAGGCATaGCCCCCGCCATCCTCACCT +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAALHGQA*PPPSSP
Trigger: AGGTGAGGATGGCGGGGGCCATGCCTGCCCGTGGAG...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATTATGGTCATTCCTGCTaGTGGCCAGGCCTTGATGTA +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHYGHSC*WPGLDV
Trigger: TACATCAAGGCCTGGCCACCAGCAGGAATGACCATA...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACTTGCTGGACTGAGATaGGATTTGCTGTCCCGGAAA +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTLAGLR*DLLSRK
Trigger: TTTCCGGGACAGCAAATCCCATCTCAGTCCAGCAAG...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACAACTTTCAGCGAACCCTaGAGTCCTGTTGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTTFSEP*SPVGKT
Trigger: AGTCTTGCCAACAGGACTCCAGGGTTCGCTGAAAGT...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGTCCGAGGGCCGCCCTTaGAACTGCCCGCTACTTTGT +
Preference number: 4 (lower is better)
Translates to: VKKGQASDLKACCPAGSGSEGRP*NCPLLC
Trigger: ACAAAGTAGCGGGCAGTTCCAAGGGCGGCCCTCGGA...CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGGGCTGTGCTCACCGCTCTGCTaGCCATGGTGCTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: QAPLCLCASWLQLAERGLCSPLC*PWCWLC
Trigger: GCAAAGCCAGCACCATGGCCAGCAGAGCGGTGAGCA...CAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACGAACGAAGGCTCAGGTaGCCTGGAAGAAAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDERRLR*PGRKCF
Trigger: GAAACACTTTCTTCCAGGCCACCTGAGCCTTCGTTC...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGGCAAGCCAGGGATCATaGGCTCAGAGGTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VKKGQASDLKACCPAGSGASQGS*AQRSAR
Trigger: CCTGGCTGACCTCTGAGCCCATGATCCCTGGCTTGC...CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CTGAGGGGCAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGAAAGGCCCATTCTaGGGCTGGCCCTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LRGRRLCVSVLLGSSWQNEKGPF*GWPWED
Trigger: ATCCTCCCAGGGCCAGCCCCAGAATGGGCCTTTCTC...GTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTGCCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTGCTCCCAAACCACTCTaGCTGGGGCTGGTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGAPKPL*LGLVQN
Trigger: GTTCTGAACCAGCCCCAGTCAGAGTGGTTTGGGAGC...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGCTCCCAAACCACTCTaGCTGGGGCTGGTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GRASRARVGLIHMGIDITAPKPL*LGLVQN
Trigger: GTTCTGAACCAGCCCCAGTCAGAGTGGTTTGGGAGC...TGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAAGACTTCCCGGCCTCATaGACACCGGCTGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQDFPAS*TPAGRL
Trigger: CAACCTACCAGCCGGTGTTCATGAGGCCGGGAAGTC...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTGTCCCCCAGCAACATTaGGCACATGGATCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGVPQQH*AHGSPW
Trigger: CCAGGGAGATCCATGTGCTCAATGTTGCTGGGGGAC...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACAGCTTTCATTCATCCATaGATCCTCACCCAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTAFIHP*ILTQGP
Trigger: TGGCCCTTGGGTGAGGATTCATGGATGAATGAAAGC...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGGGTAGGTCAGAACCGTaGCGGAGCAAGGTGAGCGTT +
Preference number: 4 (lower is better)
Translates to: VKKGQASDLKACCPAGSGGRSEP*RSKVSV
Trigger: AACGCTCACCTTGCTCCGTCACGGTTCTGACCTACC...CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACACTCATGGACTTCATGTaGGAGACGGCCATGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GRASRARVGLIHMGIDITLMDFM*ETAMRR
Trigger: CCTCCGCATGGCCGTCTCGCACATGAAGTCCATGAG...TGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACATCCACGTCATCAGGATaGACCTGTTCATACAGTGTG +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTSTSSG*TCSYSV
Trigger: CACACTGTATGAACAGGTGCATCCTGATGACGTGGA...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACAATCCTCATGGATGACTaGTGCCCTTCTTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTILMDD*CPSFLT
Trigger: GGTCAAGAAAGAAGGGCAGCAGTCATCCATGAGGAT...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACAATCCATCTCTCTGGTaGACTTCCAATTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDNPSLW*TSNSAC
Trigger: GCAGGCAGAATTGGAAGTGCACCAGAGAGATGGATT...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACAAAAACGGTGGAAACATaGCCAGGTCGGCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: GRAAAAAGESGAMMRLGTKTVET*PGRQSL
Trigger: AAGACTTTGCCGACCTGGGCATGTTTCCACCGTTTT...TGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCACCGAGCAGCCGCGGCTaGAGGGGAGAGTGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAAPSSRG*RGEWSN
Trigger: ATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGCATCCTGGGCAGGCCTaGTGGTGCTGCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWHPGQA*WCCLVT
Trigger: AGTGACCAAGCAGCACCAGCAGGCCTGCCCAGGATG...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGGGCTGTCCCTCCATGTGCCCTaGAGCAGCCACGGTACCTTT +
Preference number: 4 (lower is better)
Translates to: QAPLCLCASWLQLAERGLSLHVP*SSHGTF
Trigger: AAAGGTACCGTGGCTGCTGCAGGGCACATGGAGGGA...CAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGGTCCGGTGGCCGCCATaGGGGCAACGGGCAACGTCA +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQVRWPP*GQRATS
Trigger: TGACGTTGCCCGTTGCCCCCATGGCGGCCACCGGAC...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTTCCTCACCTGTCCGGTaGCCGCCATGGGGGCAACGG +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPSSPVR*PPWGQR
Trigger: CCGTTGCCCCCATGGCGGCCACCGGACAGGTGAGGA...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCTCCACGGGCAGGCATaGCCCCCGCCATCCTCACCT +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPLHGQA*PPPSSP
Trigger: AGGTGAGGATGGCGGGGGCCATGCCTGCCCGTGGAG...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACGACAATCCATCTCTCTaGTGCACTTCCAATTCTGCC +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDDNPSL*CTSNSA
Trigger: GGCAGAATTGGAAGTGCACCAGAGAGATGGATTGTC...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGCACCGGCTGGTAGGTTaGGGACGGGGACCTGGGATA +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVHRLVG*GRGPGI
Trigger: TATCCCAGGTCCCCGTCCCCAACCTACCAGCCGGTG...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGCCAGTCCCCTGGGTTaGATCTCCTGGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWASPLG*ISWHGQ
Trigger: CTGCCCATGCCAGGAGATCCAACCCAGGGGACTGGC...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGGCCAGTCCCCTGGGTTaGATCTCCTGGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASTSQYGWHCTAGASLWPASPLG*ISWHGQ
Trigger: CTGCCCATGCCAGGAGATCCAACCCAGGGGACTGGC...CGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACATCGACATCACAGTATaGGTGGCACTGTACAGCAGG +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHIDITV*VALYSR
Trigger: CCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACAATCGACATCACAGTATaGGTGGCACTGTACAGCAGG +
Preference number: 4 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTIDITV*VALYSR
Trigger: CCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGTCTGCCAGGGCCCCTaGTCAGTGGCCGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTAVCQGP*SVAEQP
Trigger: CGGCTGCTCGGCCACTGACCAGGGGCCCTGGCAGAC...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CTAATGTCTGCCAGGGCCCCTGGTCAGTGGCCGAGCAGCCGCGGCTGCAGGGGAGGTCACTCTGGGCATTaGCTGAACTTTCATGGGTAT +
Preference number: 4 (lower is better)
Translates to: LMSARAPGQWPSSRGCRGGHSGH*LNFHGY
Trigger: ATACCCATGAAAGTTCAGCCAATGCCCAGAGTGACC...TCCCCTGCAGCCGCGGCTGCTCGGCCACTGACCAGGGGCCCTGGCAGACATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATCTGTCCTGCAGGCTCTaGGCAGGCACAAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GQAGRGWASFTWASTSQYLSCRL*AGTRSS
Trigger: GGAGGACCTTGTGCCTGCCCAGAGCCTGCAGGACAG...ATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAAGCAAGCCAGGGATCATaGGCTCAGAGGTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQASQGS*AQRSAR
Trigger: CCTGGCTGACCTCTGAGCCCATGATCCCTGGCTTGC...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CTAATGTCTGCCAGGGCCCCTGGTCAGTGGCCGAGCAGCCGCGGCTGCAGGGGAAGCTGTTCCGGTCACTaGCTTCTTCCTGTTTATGTG +
Preference number: 4 (lower is better)
Translates to: LMSARAPGQWPSSRGCRGSCSGH*LLPVYV
Trigger: CACATAAACAGGAAGAAGCCAGTGACCGGAACAGCT...TCCCCTGCAGCCGCGGCTGCTCGGCCACTGACCAGGGGCCCTGGCAGACATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGACCTCATCCTGCAGATaGAAGACCGCCGCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVTSSCR*KTAASP
Trigger: TGGGCTCGCGGCGGTCTTTCATCTGCAGGATGAGGT...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACGGTAGCCAATCACACTaGTACATCTTGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDGSQSH*YILDPQ
Trigger: TTGTGGATCCAAGATGTATCAGTGTGATTGGCTACC...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGGAAGGGCCAGGCCTCTaGCCTCAAGGCGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ECSRAILGHPVAITDPVLEGPGL*PQGVLS
Trigger: GGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTC...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCACTGCGAGGGCCTACCTaGAGGACTCTGGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAALRGPT*RTLGGT
Trigger: TGTCCCTCCCAGAGTCCTTCAGGTAGGCCCTCGCAG...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGGGCTGTCACTGACCCAGTCCTaGTGGAGCCTTACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QAPLCLCASWLQLAERGLSLTQS*WSLTVA
Trigger: AGCCACAGTAAGGCTCCATCAGGACTGGGTCAGTGA...CAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACGAATGTGGCTATTTGTaGTGGCTGTCACTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHECGYL*WLSLPE
Trigger: TTCAGGGAGTGACAGCCATCACAAATAGCCACATTC...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATGCCAGAGGAAAGAGATaGTGTCACTGCCTCAAAATA +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHARGKR*CHCLKI
Trigger: TATTTTGAGGCAGTGACATCATCTCTTTCCTCTGGC...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533983.5
CDS-3UTR GCA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACCTGTTCATACAGTGTaGTCCCAAACCACTCTGACT +
Preference number: 4 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTPVHTV*SQTTLT
Trigger: AGTCAGAGTGGTTTGGGAGCACACTGTATGAACAGG...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACCGAGGCAATATTTACTaGCTTGTCCCACATCAGCGT +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHRGNIY*LVPHQR
Trigger: ACGCTGATGTGGGACAAGGCAGTAAATATTGCCTCG...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp CTAATGTCTGCCAGGGCCCCTGGTCAGTGGCCGAGCAGCCGCGGCTGCAGGGGAATTCCATCGGAGTTATaGCGGGATAAGAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: LMSARAPGQWPSSRGCRGIPSEL*RDKNSV
Trigger: CACAGAGTTCTTATCCCGGCATAACTCCGATGGAAT...TCCCCTGCAGCCGCGGCTGCTCGGCCACTGACCAGGGGCCCTGGCAGACATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CTAATGTCTGCCAGGGCCCCTGGTCAGTGGCCGAGCAGCCGCGGCTGCAGGGGAGAGATGACTGAGTCTTaGTGGACTGAGATGGGATTT +
Preference number: 4 (lower is better)
Translates to: LMSARAPGQWPSSRGCRGEMTES*WTEMGF
Trigger: AAATCCCATCTCAGTCCAGCAAGACTCAGTCATCTC...TCCCCTGCAGCCGCGGCTGCTCGGCCACTGACCAGGGGCCCTGGCAGACATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGCCATGGTGCTGGCTTTaGCACTGCGACCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWPWCWL*HCDQTS
Trigger: GGAAGTCTGGTCGCAGTGGCAAAGCCAGCACCATGG...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTACTCTGCTGGCCATGGTaGTGGCTTTGCCACTGCGAC +
Preference number: 4 (lower is better)
Translates to: RASRARVGLIHMGIDITVLCWPW*WLCHCD
Trigger: GTCGCAGTGGCAAAGCCAGCACCATGGCCAGCAGAG...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGCTGCTCACCGCTCTaGTGGCCATGGTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RASRARVGLIHMGIDITVCCSPL*WPWCWL
Trigger: AAGCCAGCACCATGGCCAGCAGAGCGGTGAGCAGCA...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACAAAACGGTGGAAACATaGCCAGGTCGGCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHKTVET*PGRQSL
Trigger: AAGACTTTGCCGACCTGGGCATGTTTCCACCGTTTT...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGTCTGCCCCTGAGACCTaGACTCTGTGCCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWSAPET*TLCLPE
Trigger: CTCTGGGAGGCACAGAGTGCAGGTCTCAGGGGCAGA...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCGTCCGGTGGCCGCCATaGGGGCAACGGGCAACGTCA +
Preference number: 4 (lower is better)
Translates to: IHMGIDITVWVALYSRSLVRWPP*GQRATS
Trigger: TGACGTTGCCCGTTGCCCCCATGGCGGCCACCGGAC...GAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGCCAGTGCGCTGCATGTaGGGACCATGTCGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWPVRCM*GPCRRA
Trigger: AGCTCTCCGACATGGTCCCCACATGCAGCGCACTGG...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCATGGCGAGGAGGTAGCTaGGCTGGAGAGGGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAAWRGGS*AGEGAV
Trigger: TACAGCCCCCTCTCCAGCCCAGCTACCTCCTCGCCA...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGTGCTGGCCATGGTGCTaGCTTTGCCACTGCGACCAG +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWCWPWC*LCHCDQ
Trigger: CTGGTCGCAGTGGCAAAGCCAGCACCATGGCCAGCA...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGCTGGGTTGGATCTCCTaGCATGGGCAGCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWLGWIS*HGQHVL
Trigger: CAGGACATGCTGCCCATGCCAGGAGATCCAACCCAG...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGGGCTGGCAGGAGCCTCACTCTaGCCGCAGCTACTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: QAPLCLCASWLQLAERGLAGASL*PQLLRK
Trigger: TTTTCTGAGTAGCTGCGGCCAGAGTGAGGCTCCTGC...CAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACAAGGGCCCCTGGTCAGTaGCCGAGCAGCCGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTRAPGQ*PSSRGC
Trigger: GCAGCCGCGGCTGCTCGGCCACTGACCAGGGGCCCT...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACCAGGGCCACACATTTTaGCTCTCTACATACTCTGGA +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHQGHTF*LSTYSG
Trigger: TCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTG...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGGGCCGAGCAACCTCTaGTCATGGCCGGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQGPSNL*SWPVVL
Trigger: CAGCACCACCGGCCATGACCAGAGGTTGCTCGGCCC...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGGGGCCGAGCAACCTCTaGTCATGGCCGGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQGPSNL*SWPVVL
Trigger: CAGCACCACCGGCCATGACCAGAGGTTGCTCGGCCC...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CTGAGGGGCAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACTCACGCAGATGGCTTTaGTCCTCAGGGTGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: LRGRRLCVSVLLGSSWQNSRRWL*SSGWQN
Trigger: ATTCTGCCACCCTGAGGATCAAAGCCATCTGCGTGA...GTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACTGGTGTTGGTGCAGATaGTGTACTCAATCTCATCAG +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHWCWCR*CTQSHQ
Trigger: CTGATGAGATTGAGTACATCATCTGCACCAACACCA...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCAGGGAGAGTGGAGCAATaGTGCGCCTGGGGACACACA +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAAGRVEQ*CAWGHT
Trigger: TGTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCC...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGCATGGCCGGTGGTGCTaGGCTTGGGGACAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKHGRWC*AWGQGH
Trigger: GTGGCCCTGTCCCCAAGCTCAGCACCACCGGCCATG...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CTATCTACATCTGTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGAAGGGCCAGGCCTCTaGCCTCAAGGCGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSTSVKKGQASDLKACCPEGPGL*PQGVLS
Trigger: GGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTC...AGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGATGTAGATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGTTCATGGTGCCCATGTaGGAAGGCCTGGGCGTCCTA +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVFMVPM*EGLGVL
Trigger: TAGGACGCCCAGGCCTTCTCACATGGGCACCATGAA...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACCAGAAATCCATCAGCTaGTTCAAGGATGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDQKSIS*FKDEML
Trigger: AAGCATCTCATCCTTGAAGCAGCTGATGGATTTCTG...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCAGAAATCCATCAGCTaGTTCAAGGATGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHQKSIS*FKDEML
Trigger: AAGCATCTCATCCTTGAAGCAGCTGATGGATTTCTG...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACTTGAGTTTTCTGAGGTaGACAGTTGCTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHLSFLR*TVALSA
Trigger: AGCTGAGAGAGCAACTGTGCACCTCAGAAAACTCAA...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp CTGAGGGGCAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACAGGTATGGTCATTCCTaGTGGTGGCCAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LRGRRLCVSVLLGSSWQNRYGHS*WWPGLD
Trigger: ATCAAGGCCTGGCCACCAGCAGGAATGACCATACCT...GTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACAATTCCATCGGAGTTATaGCGGGATAAGAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTIPSEL*RDKNSV
Trigger: CACAGAGTTCTTATCCCGGCATAACTCCGATGGAAT...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCACTCTGCTGGCCATGGTaGTGGCTTTGCCACTGCGAC +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAALCWPW*WLCHCD
Trigger: GTCGCAGTGGCAAAGCCAGCACCATGGCCAGCAGAG...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAAGAGGGCTGTGCACTCTaGTTGCCCATTTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQEGCAL*LPIFPA
Trigger: TGCTGGGAAAATGGGCAAGCAGAGTGCACAGCCCTC...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGCCACGGCACAGTGGATaGACAGACAGACCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: NPALSPSPVREVSAGHGLPRHSG*TDRPAE
Trigger: CTCCGCTGGTCTGTCTGTGCATCCACTGTGCCGTGG...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGCAAGGCGTGCTGTCCTaGAGGCTCTGGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQQGVLS*RLWAGT
Trigger: TGTGCCTGCCCAGAGCCTGCAGGACAGCACGCCTTG...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CTGAGGGGCAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACCAGTGGGGAGCTGTCTaGTTGCCTGACCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LRGRRLCVSVLLGSSWQNQWGAV*LPDLRK
Trigger: TTTCCTTAGGTCAGGCAAGCAGACAGCTCCCCACTG...GTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCATGGGCTGCCTAAAGTaGTGCCGGGAGTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLMGCLK*CREWGD
Trigger: GTCTCCCCACTCCCGGCAGCACTTTAGGCAGCCCAT...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGTGCACCACTGTGTGGTaGCTCCTTAAGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWCTTVW*LLKLPQ
Trigger: CTGGGGCAACTTAAGGAGGCACCACACAGTGGTGCA...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACGTGAAACCTCCATTTTaGCACTTTCAAGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHVKPPF*HFQGQC
Trigger: GCACTGACCTTGAAAGTGGCAAAATGGAGGTTTCAC...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGTCCCTGTACCCCTCATaGACTTCATGTGCGAGACGG +
Preference number: 4 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWSLYPS*TSCARR
Trigger: CCGTCTCGCACATGAAGTCCATGAGGGGTACAGGGA...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACTGGACCACAGCATATTaGGCTTCTCCTTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHWTTAY*ASPSFT
Trigger: TGTGAAAGAAGGAGAAGCCCAATATGCTGTGGTCCA...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACACGTCTTCTTCAGGTATaGTCATTCCTGCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRASRARVGLIHMGIDITRLLQV*SFLLVA
Trigger: GGCCACCAGCAGGAATGACCATACCTGAAGAAGACG...TGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGAGCTTAACCACCTGCTaGAAGCTCTCACGCAGATGG +
Preference number: 4 (lower is better)
Translates to: VKKGQASDLKACCPAGSGSLTTC*KLSRRW
Trigger: CCATCTGCGTGAGAGCTTCCAGCAGGTGGTTAAGCT...CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCACCGGCTGGTAGGTTaGGGACGGGGACCTGGGATA +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQHRLVG*GRGPGI
Trigger: TATCCCAGGTCCCCGTCCCCAACCTACCAGCCGGTG...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACAACATGTTCTGGCCCGTaGAAGAAGAGGACTGAATAT +
Preference number: 4 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTTCSGP*KKRTEY
Trigger: ATATTCAGTCCTCTTCTTCCACGGGCCAGAACATGT...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGAAGAAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGTGGCGAGGAGGTAGCTaGGCTGGAGAGGGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: WKKVFHGAHVRRPGRPTLWRGGS*AGEGAV
Trigger: TACAGCCCCCTCTCCAGCCCAGCTACCTCCTCGCCA...CAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGTGGCGAGGAGGTAGCTaGGCTGGAGAGGGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQWRGGS*AGEGAV
Trigger: TACAGCCCCCTCTCCAGCCCAGCTACCTCCTCGCCA...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGCCGCTCTGCTGGCCATaGTGCTGGCTTTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQPLCWP*CWLCHC
Trigger: GCAGTGGCAAAGCCAGCACCATGGCCAGCAGAGCGG...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGCTGGGTTGGATCTCCTaGCATGGGCAGCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVLGWIS*HGQHVL
Trigger: CAGGACATGCTGCCCATGCCAGGAGATCCAACCCAG...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAACATCACAGTATGGGTaGCACTGTACAGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GRASRARVGLIHMGIDITTSQYG*HCTAGA
Trigger: GGCTCCTGCTGTACAGTGCCACCCATACTGTGATGT...TGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTACATCACAGTATGGGTaGCACTGTACAGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGTSQYG*HCTAGA
Trigger: GGCTCCTGCTGTACAGTGCCACCCATACTGTGATGT...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGGTCTGCCAGGGCCCCTaGTCAGTGGCCGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMVCQGP*SVAEQP
Trigger: CGGCTGCTCGGCCACTGACCAGGGGCCCTGGCAGAC...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGAAGAAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCCTGGGCAGGCCTGCTaGTGCTGCTTGGTCACTCTG +
Preference number: 4 (lower is better)
Translates to: WKKVFHGAHVRRPGRPTLPGQAC*CCLVTL
Trigger: CAGAGTGACCAAGCAGCACCAGCAGGCCTGCCCAGG...CAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGAGCAACCTCTGGTCATaGCCGGTGGTGCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: ASTSQYGWHCTAGASLWPSNLWS*PVVLSL
Trigger: CAAGCTCAGCACCACCGGCCATGACCAGAGGTTGCT...CGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGCCATGTGAGAAGGCCTaGGCGTCCTACCCTGCTATC +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWPCEKA*ASYPAI
Trigger: GATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGG...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCATTCTGGGGCTGGCCCTaGGAGGATGTGCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAAFWGWP*EDVQGF
Trigger: GAAACCCTGCACATCCTCCCAGGGCCAGCCCCAGAA...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCAGGCCCATTCTGGGGCTaGCCCTGGGAGGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAGPFWG*PWEDVQ
Trigger: CTGCACATCCTCCCAGGGCCAGCCCCAGAATGGGCC...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAATGGGCGGTACTGGCATaGGAGGCTCTTTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQWAVLA*EALLQT
Trigger: GGTTTGCAAAAGAGCCTCCCATGCCAGTACCGCCCA...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGCCATTTCCGGAGGGTTaGCCGCCGCCGGGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMPFPEG*PPPGLP
Trigger: TGGCAACCCCGGCGGCGGTCAACCCTCCGGAAATGG...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000622346.4
CDS-3UTR TCA 90 bp CAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGGGCTGGCACATCCTCATGGATaGCTGCTGCCCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QAPLCLCASWLQLAERGLAHPHG*LLPFFL
Trigger: AAGAAAGAAGGGCAGCAGTCATCCATGAGGATGTGC...CAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGGGCTGTTCACTCCAGGCACATaGACCACTGAAGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QAPLCLCASWLQLAERGLFTPGT*TTEELK
Trigger: CTTCAGCTCTTCAGTGGTTCATGTGCCTGGAGTGAA...CAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp ATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGTGGAACACTTCAGTCTaGCCGGGCTGCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: MGIDITVWVALYSRSLTLWNTSV*PGCWWE
Trigger: CTCCCACCAGCAGCCCGGTCAGACTGAAGTGTTCCA...CAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTTGGAACACTTCAGTCTaGCCGGGCTGCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPWNTSV*PGCWWE
Trigger: CTCCCACCAGCAGCCCGGTCAGACTGAAGTGTTCCA...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAATGGGAGTCAGTGGGCTaGTGGGCTGGTGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQWESVG*WAGDKK
Trigger: TTTCTTATCACCAGCCCATCAGCCCACTGACTCCCA...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGTCACTGACCCAGTCCTaGTGGAGCCTTACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: ASTSQYGWHCTAGASLWPSLTQS*WSLTVA
Trigger: AGCCACAGTAAGGCTCCATCAGGACTGGGTCAGTGA...CGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCGTGTTTGGTGGGGAATaGCCCCGGCAGGTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLVFGGE*PRQVRR
Trigger: TCTCCTAACCTGCCGGGGTCATTCCCCACCAAACAC...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCCGGGGTTGCCATCTTaGTCGGAGAGGATAGGCGCC +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPPGLPS*SERIGA
Trigger: GGCGCCTATCCTCTCCGAGCAAGATGGCAACCCCGG...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303329.9
CDS-3UTR GCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCCCGGGGTTGCCATCTTaGTCGGAGAGGATAGGCGCC +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCPGLPS*SERIGA
Trigger: GGCGCCTATCCTCTCCGAGCAAGATGGCAACCCCGG...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000622346.4
CDS-3UTR GCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTTCCGAGCCAGTGCGCTaGATGTGGGGACCATGTCGG +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPSEPVR*MWGPCR
Trigger: CCGACATGGTCCCCACATGCAGCGCACTGGCTCGGA...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCACTCATGGACTTCATGTaGGAGACGGCCATGCGGAGG +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAALMDFM*ETAMRR
Trigger: CCTCCGCATGGCCGTCTCGCACATGAAGTCCATGAG...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGTAGGAAGAGGGGTCTaGCGGGTAGGTGTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQVGRGV*RVGVAR
Trigger: ACGAGCCACACCTACCCGGCAGACCCCTCTTCCTAC...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp CCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGTGCTGGTGGGAGTGCTaGTCACCGCTCTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PHSHGHRHHSMGGTVQQECWWEC*SPLCWP
Trigger: TGGCCAGCAGAGCGGTGAGCAGCACTCCCACCAGCA...CTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGCATCCTGGGCAGGCCTaGTGGTGCTGCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQHPGQA*WCCLVT
Trigger: AGTGACCAAGCAGCACCAGCAGGCCTGCCCAGGATG...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CTATCTACATCTGTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTTGGGAGGAGGGTGAGTaGTCCCTTGGGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LSTSVKKGQASDLKACCPWEEGE*SLGAPV
Trigger: CACAGGAGCCCCAAGGGAGCACTCACCCTCCTCCCA...AGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGATGTAGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGTCCCTCCATGTGCCCTaGAGCAGCCACGGTACCTTT +
Preference number: 4 (lower is better)
Translates to: NPALSPSPVREVSAGHGLSLHVP*SSHGTF
Trigger: AAAGGTACCGTGGCTGCTGCAGGGCACATGGAGGGA...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTAGCTTGGAAATGTGCCTaGACCACTGTGTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: RASRARVGLIHMGIDITVAWKCA*TTVWCL
Trigger: GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGC...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGGTCCGGTGGCCGCCATaGGGGCAACGGGCAACGTCA +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMVRWPP*GQRATS
Trigger: TGACGTTGCCCGTTGCCCCCATGGCGGCCACCGGAC...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACACTCCACGGGCAGGCATaGCCCCCGCCATCCTCACCT +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTLHGQA*PPPSSP
Trigger: AGGTGAGGATGGCGGGGGCCATGCCTGCCCGTGGAG...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCTCTTGAAAATTTACTaGGGCCTTCACCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHLLKIY*GLHHLH
Trigger: ATGAAGATGGTGAAGGCCCCAGTAAATTTTCAAGAG...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCACTCTGACTGGGGCTaGTTCAGAACAGGGGTGACG +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLHSDWG*FRTGVT
Trigger: CGTCACCCCTGTTCTGAACCAGCCCCAGTCAGAGTG...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTCCATGCACATCCTCATaGATGACTGCTGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGPCTSS*MTAALL
Trigger: AAGAAGGGCAGCAGTCATCCATGAGGATGTGCATGG...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGGGCTGCCATGCACATCCTCATaGATGACTGCTGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QAPLCLCASWLQLAERGLPCTSS*MTAALL
Trigger: AAGAAGGGCAGCAGTCATCCATGAGGATGTGCATGG...CAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CTGAGGGGCAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGGGATAAGAACTCTGTaGGCACCGACATCCCATTCA +
Preference number: 4 (lower is better)
Translates to: LRGRRLCVSVLLGSSWQNGIRTL*APTSHS
Trigger: TGAATGGGATGTCGGTGCCCACAGAGTTCTTATCCC...GTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTGCCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTATGACCGACAGGACTTaGCCTTTCAGCTTAACCACC +
Preference number: 4 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGMTDRT*PFSLTT
Trigger: GGTGGTTAAGCTGAAAGGCCAAGTCCTGTCGGTCAT...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGCTTGCTGGACTGAGATaGGATTTGCTGTCCCGGAAA +
Preference number: 4 (lower is better)
Translates to: VKKGQASDLKACCPAGSGLAGLR*DLLSRK
Trigger: TTTCCGGGACAGCAAATCCCATCTCAGTCCAGCAAG...CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCTGGCGAGGAGGTAGCTaGGCTGGAGAGGGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCWRGGS*AGEGAV
Trigger: TACAGCCCCCTCTCCAGCCCAGCTACCTCCTCGCCA...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTAGCAGGAGCCTCACTCTaGCCGCAGCTACTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RASRARVGLIHMGIDITVAGASL*PQLLRK
Trigger: TTTTCTGAGTAGCTGCGGCCAGAGTGAGGCTCCTGC...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCGGAGATGGCTTCTGGTaGGGGGCCTGCGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETGDGFW*GACGRA
Trigger: TGCCCTGCCGCAGGCCCCCCACCAGAAGCCATCTCC...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACAGGAGATGGCTTCTGGTaGGGGGCCTGCGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTGDGFW*GACGRA
Trigger: TGCCCTGCCGCAGGCCCCCCACCAGAAGCCATCTCC...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCACCTGGGCAGGCCTGCTaGTGCTGCTTGGTCACTCTG +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTAPGQAC*CCLVTL
Trigger: CAGAGTGACCAAGCAGCACCAGCAGGCCTGCCCAGG...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGCCAGCTCCCAGACCCTaGGCCGAGCAACCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPPAPRP*AEQPLV
Trigger: GACCAGAGGTTGCTCGGCCCAGGGTCTGGGAGCTGG...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CTATCTACATCTGTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTCCCTTGGGGCTCCTGTaGGAGGAAGGAGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LSTSVKKGQASDLKACCPPLGLL*EEGAAS
Trigger: GGAAGCAGCTCCTTCCTCCCACAGGAGCCCCAAGGG...AGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGATGTAGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCACTGTCCTGCAGGCTCTaGGCAGGCACAAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTALSCRL*AGTRSS
Trigger: GGAGGACCTTGTGCCTGCCCAGAGCCTGCAGGACAG...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGATTATGCCCAAGGCCTaGGGCAAGCTCAAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ASTSQYGWHCTAGASLWPIMPKA*GKLKPA
Trigger: AGCAGGCTTGAGCTTGCCCCAGGCCTTGGGCATAAT...CGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTACTTGGTGAAAACCCCTaGGGCATGTGCGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: RASRARVGLIHMGIDITVLGENP*GMCDSP
Trigger: GGGAGAATCGCACATGCCCCAGGGGTTTTCACCAAG...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGTCCGGCCTCCAAGGCTaGGCGGTACTGGCATGGGAG +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWSGLQG*AVLAWE
Trigger: CTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGA...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGGTATCTGCTGGGCATaGGCTGAAGGACAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWGICWA*AEGQAD
Trigger: GTCTGCTTGTCCTTCAGCCCATGCCCAGCAGATACC...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTAAAGTGCTGCCGGGAGTaGGGAGACCACCATTCATTC +
Preference number: 4 (lower is better)
Translates to: RASRARVGLIHMGIDITVKCCRE*GDHHSF
Trigger: GAATGAATGGTGGTCTCCCCACTCCCGGCAGCACTT...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 72 bp CCGAGCAACCTCTGGTCATGGCCGGTGGTGCTGAGCTaGGGGACAGGGCCACACATTTTGGCTCTCTACATA +
Preference number: 4 (lower is better)
Translates to: PSNLWSWPVVLS*GTGPHILALYI
Trigger: TATGTAGAGAGCCAAAATGTGTGGCCCTGTCCCCAAGCTCAGCACCACCGGCCATGACCAGAGGTTGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACAACTATGATTCTCTCTTaGAAATTTACTGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTTMILS*KFTGAF
Trigger: GAAGGCCCCAGTAAATTTTCAAGAGAGAATCATAGT...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCTATCTCCATGCGGAGGATGGTaGGCTTGTCTGGCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: KVFHGAHVRRPGRPTLLSPCGGW*ACLASE
Trigger: CTCGGAAGCCAGACAAGCTCACCATCCTCCGCATGG...AGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp ATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCTCCCAAACCACTCTaGCTGGGGCTGGTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: MGIDITVWVALYSRSLTLAPKPL*LGLVQN
Trigger: GTTCTGAACCAGCCCCAGTCAGAGTGGTTTGGGAGC...CAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGGCTGCCCTTCTTTCTTaGCCGTCCCAGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: NPALSPSPVREVSAGHGLAALLS*PSQSSG
Trigger: ACCTGAAGACTGGGACGGTCAAGAAAGAAGGGCAGC...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCGGCCAAGGCCATTCCTaGACCTTTTCCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLGQGHS*TFSSWW
Trigger: CCACCATGAGGAAAAGGTTCAGGAATGGCCTTGGCC...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATCTGCCTGCTGTTGCTaGAGTTGCTTGACGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RASRARVGLIHMGIDITVSACCC*SCLTLV
Trigger: CACCAACGTCAAGCAACTTCAGCAACAGCAGGCAGA...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp ATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCGACTTCCCGGCCTCATaGACACCGGCTGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: IHMGIDITVWVALYSRSLDFPAS*TPAGRL
Trigger: CAACCTACCAGCCGGTGTTCATGAGGCCGGGAAGTC...GAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCAGACTTCCCGGCCTCATaGACACCGGCTGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: ASLHSQVPRTNATLLGPADFPAS*TPAGRL
Trigger: CAACCTACCAGCCGGTGTTCATGAGGCCGGGAAGTC...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGTCCTGCTGCAGAGGCTaGGCTCATCATCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWSCCRG*AHHLLL
Trigger: GAGAAGAAGATGATGAGCTCAGCCTCTGCAGCAGGA...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp ATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGAACCACTGAAGAGCTaGAGGCCTTCCCGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: MGIDITVWVALYSRSLTLEPLKS*RPSRSV
Trigger: GACACTCCGGGAAGGCCTTCAGCTCTTCAGTGGTTC...CAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCACCTGTCCATGCCACCTaGCTCTGGTTTAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAPVHAT*LWFSCR
Trigger: CCGGCAGCTAAACCAGAGTCAGGTGGCATGGACAGG...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTGTCCATGCCACCTaGCTCTGGTTTAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PHSHGHRHHSMGGTVQQEPVHAT*LWFSCR
Trigger: CCGGCAGCTAAACCAGAGTCAGGTGGCATGGACAGG...CTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCCTGTCCATGCCACCTaGCTCTGGTTTAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPPVHAT*LWFSCR
Trigger: CCGGCAGCTAAACCAGAGTCAGGTGGCATGGACAGG...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCTGGAACACTTCAGTCTaGCCGGGCTGCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TLALATKARDTYAWKCACWNTSV*PGCWWE
Trigger: CTCCCACCAGCAGCCCGGTCAGACTGAAGTGTTCCA...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GCCTCTCCCCTTTCTAATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTTGGAACACTTCAGTCTaGCCGGGCTGCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ASPLSNPALSPSPVREVSWNTSV*PGCWWE
Trigger: CTCCCACCAGCAGCCCGGTCAGACTGAAGTGTTCCA...AGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGCTAAGAGGAGGAGCTTaGATCTGCACCAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVLRGGA*ICTRGL
Trigger: CAAGCCTCTGGTGCAGATTCAAGCTCCTCCTCTTAG...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp TGGAAGAAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCCAAGGGCCAAGAACTaGGTTCACTGCACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: WKKVFHGAHVRRPGRPTLPRAKN*VHCTLD
Trigger: GTCCAGGGTGCAGTGAACTCAGTTCTTGGCCCTTGG...CAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGAGACCACAGGGGCCATaGGCATTCCGGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWRPQGP*AFRPPR
Trigger: CCTTGGAGGCCGGAATGCTCATGGCCCCTGTGGTCT...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGTCCTGTTGCCATCACTaGCCCAGTCCTGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQSCCHH*PSPDGA
Trigger: GGCTCCATCAGGACTGGGTCAGTGATGGCAACAGGA...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTGGTAGGTCAGAACCGTaGCGGAGCAAGGTGAGCGTT +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPGRSEP*RSKVSV
Trigger: AACGCTCACCTTGCTCCGTCACGGTTCTGACCTACC...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAATTCAGCTTAACCACCTaGTGGAAGCTCTCACGCAGA +
Preference number: 4 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQFSLTT*WKLSRR
Trigger: TCTGCGTGAGAGCTTCCAGCAGGTGGTTAAGCTGAA...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCCATGGTGCTGGCTTTaGCACTGCGACCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQPWCWL*HCDQTS
Trigger: GGAAGTCTGGTCGCAGTGGCAAAGCCAGCACCATGG...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGCCATGGTGCTGGCTTTaGCACTGCGACCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQPWCWL*HCDQTS
Trigger: GGAAGTCTGGTCGCAGTGGCAAAGCCAGCACCATGG...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCCTCTGCTGGCCATGGTaGTGGCTTTGCCACTGCGAC +
Preference number: 4 (lower is better)
Translates to: TLALATKARDTYAWKCACLCWPW*WLCHCD
Trigger: GTCGCAGTGGCAAAGCCAGCACCATGGCCAGCAGAG...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGTGCTGGTGGGAGTGCTaGTCACCGCTCTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWCWWEC*SPLCWP
Trigger: TGGCCAGCAGAGCGGTGAGCAGCACTCCCACCAGCA...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCATCTGCCCCTGAGACCTaGACTCTGTGCCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTASAPET*TLCLPE
Trigger: CTCTGGGAGGCACAGAGTGCAGGTCTCAGGGGCAGA...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCACTCCAAACTCCTTCCTaGATGCTGGCCTCACTCCAC +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAALQTPS*MLASLH
Trigger: GTGGAGTGAGGCCAGCATGCAGGAAGGAGTTTGGAG...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCCATCTGTGTCCTTGCTaGCGGCCCGGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCHLCPC*RPGLSL
Trigger: CAGTGACAACCCGGGCCGGCAGCAAGGACACAGATG...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GCCTCTCCCCTTTCTAATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTCATCTGTGTCCTTGCTaGCGGCCCGGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: ASPLSNPALSPSPVREVSHLCPC*RPGLSL
Trigger: CAGTGACAACCCGGGCCGGCAGCAAGGACACAGATG...AGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGGGCTGCCTAAAGTGCTaGCGGGAGTGGGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLGCLKC*REWGDH
Trigger: GTGGTCTCCCCACTCCCGGCAGCACTTTAGGCAGCC...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCGCTTGGAAATGTGCCTaGACCACTGTGTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLAWKCA*TTVWCL
Trigger: GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGC...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCACCAAACCACTCTGACTaGGGCTGGTTCAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAAPNHSD*GWFRTG
Trigger: CCCTGTTCTGAACCAGCCCCAGTCAGAGTGGTTTGG...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTGGAGAGCTGGTCACCTaGAGTCTCCCAATTGCCACG +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPGELVT*SLPIAT
Trigger: CGTGGCAATTGGGAGACTCCAGGTGACCAGCTCTCC...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGTGCATACAGGAGAGCTaGTCACCTGGAGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVCIQES*SPGVSQ
Trigger: TTGGGAGACTCCAGGTGACCAGCTCTCCTGTATGCA...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGTTGGGGACGGGGACCTaGGATAAGTCATACGATGAC +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVLGTGT*DKSYDD
Trigger: GTCATCGTATGACTTATCCCAGGTCCCCGTCCCCAA...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTACGAGGATCTCTTTCCTaGGAGAAGATTGCATCCGCC +
Preference number: 4 (lower is better)
Translates to: RASRARVGLIHMGIDITVRGSLS*EKIASA
Trigger: GGCGGATGCAATCTTCTCCCAGGAAAGAGATCCTCG...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGAGCTGCCGGGAGATTTaGGACATGTTCTGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQSCREI*DMFWPV
Trigger: CACGGGCCAGAACATGTCCCAAATCTCCCGGCAGCT...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCTGCTGGCCATGGTGCTaGCTTTGCCACTGCGACCAG +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCCWPWC*LCHCDQ
Trigger: CTGGTCGCAGTGGCAAAGCCAGCACCATGGCCAGCA...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGCCGCTCTGCTGGCCATaGTGCTGGCTTTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPPLCWP*CWLCHC
Trigger: GCAGTGGCAAAGCCAGCACCATGGCCAGCAGAGCGG...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCTGGGTTGGATCTCCTaGCATGGGCAGCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPLGWIS*HGQHVL
Trigger: CAGGACATGCTGCCCATGCCAGGAGATCCAACCCAG...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGCTACTCAGAAAACGGTaGAAACATGCCCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVLLRKR*KHAQVG
Trigger: GCCGACCTGGGCATGTTTCCACCGTTTTCTGAGTAG...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCAGCAGGAGCCTCACTCTaGCCGCAGCTACTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAAAGASL*PQLLRK
Trigger: TTTTCTGAGTAGCTGCGGCCAGAGTGAGGCTCCTGC...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATACATCACAGTATGGGTaGCACTGTACAGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GQAGRGWASFTWASTSQYTSQYG*HCTAGA
Trigger: GGCTCCTGCTGTACAGTGCCACCCATACTGTGATGT...ATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGCTTCTTGGCTCCAGCTaGCAGAACGAGGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQLLGSS*QNEGCA
Trigger: TGCACAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAG...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAAAGGCTCAGGTGGCCTaGAAGAAAGTGTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: GRASRARVGLIHMGIDITKAQVA*KKVFHG
Trigger: ACCATGAAACACTTTCTTCCAGGCCACCTGAGCCTT...TGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGGTCCTGCAGAATCCATaGGCAGGGATGCACGGGTTG +
Preference number: 4 (lower is better)
Translates to: ECSRAILGHPVAITDPVLVLQNP*AGMHGL
Trigger: CAACCCGTGCATCCCTGCCCATGGATTCTGCAGGAC...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGTCCTGCAGAATCCATaGGCAGGGATGCACGGGTTG +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQVLQNP*AGMHGL
Trigger: CAACCCGTGCATCCCTGCCCATGGATTCTGCAGGAC...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCAGCACATGGATCTCCCTaGCCAGACAGGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAAHGSP*PDRAGV
Trigger: AACCCCAGCCCTGTCTGGCCAGGGAGATCCATGTGC...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGGCACATGGATCTCCCTaGCCAGACAGGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PHSHGHRHHSMGGTVQQEAHGSP*PDRAGV
Trigger: AACCCCAGCCCTGTCTGGCCAGGGAGATCCATGTGC...CTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCTATCTTTCTGGGGCTGGCCCTaGGAGGATGTGCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: KVFHGAHVRRPGRPTLLSFWGWP*EDVQGF
Trigger: GAAACCCTGCACATCCTCCCAGGGCCAGCCCCAGAA...AGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCTCCGGCCTCCAAGGCTaGGCGGTACTGGCATGGGAG +
Preference number: 4 (lower is better)
Translates to: GASLSCPRLQMVKEKVNVSGLQG*AVLAWE
Trigger: CTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGA...GACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTGCCTGCACCACTGTGTaGTGCCTCCTTAAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPACTTV*CLLKLP
Trigger: GGGCAACTTAAGGAGGCACCACACAGTGGTGCAGGC...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCCATGCGGAGGATGGTaGGCTTGTCTGGCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLPCGGW*ACLASE
Trigger: CTCGGAAGCCAGACAAGCTCACCATCCTCCGCATGG...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp ATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCTGCCCTTCTTTCTTaGCCGTCCCAGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: MGIDITVWVALYSRSLTLAALLS*PSQSSG
Trigger: ACCTGAAGACTGGGACGGTCAAGAAAGAAGGGCAGC...CAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGCACATCCTCATGGATaGCTGCTGCCCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GQAGRGWASFTWASTSQYAHPHG*LLPFFL
Trigger: AAGAAAGAAGGGCAGCAGTCATCCATGAGGATGTGC...ATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGCACATCCTCATGGATaGCTGCTGCCCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWAHPHG*LLPFFL
Trigger: AAGAAAGAAGGGCAGCAGTCATCCATGAGGATGTGC...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp CATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCAAGGCCATTCCTaGACCTTTTCCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: HGHRHHSMGGTVQQEPHSGQGHS*TFSSWW
Trigger: CCACCATGAGGAAAAGGTTCAGGAATGGCCTTGGCC...AGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCTCTGCCTGCTGTTGCTaGAGTTGCTTGACGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLSACCC*SCLTLV
Trigger: CACCAACGTCAAGCAACTTCAGCAACAGCAGGCAGA...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGGACTTCCCGGCCTCATaGACACCGGCTGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPDFPAS*TPAGRL
Trigger: CAACCTACCAGCCGGTGTTCATGAGGCCGGGAAGTC...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCAGAACCACTGAAGAGCTaGAGGCCTTCCCGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAEPLKS*RPSRSV
Trigger: GACACTCCGGGAAGGCCTTCAGCTCTTCAGTGGTTC...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATTCACTCCAGGCACATaGACCACTGAAGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RASRARVGLIHMGIDITVFTPGT*TTEELK
Trigger: CTTCAGCTCTTCAGTGGTTCATGTGCCTGGAGTGAA...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGACCTGTCCATGCCACCTaGCTCTGGTTTAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGPVHAT*LWFSCR
Trigger: CCGGCAGCTAAACCAGAGTCAGGTGGCATGGACAGG...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGCTTGGACCAAAGAACTaGCCTACCCATGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWLGPKN*PTHVSM
Trigger: CATGCTCACATGGGTAGGTCAGTTCTTTGGTCCAAG...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTAAGAGGAGGAGCTTaGATCTGCACCAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLLRGGA*ICTRGL
Trigger: CAAGCCTCTGGTGCAGATTCAAGCTCCTCCTCTTAG...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp TGGAAGAAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGGAAGGCAGAGGTCCCTaGAAACAGGGGGATGGATTC +
Preference number: 4 (lower is better)
Translates to: WKKVFHGAHVRRPGRPTLEGRGP*KQGDGF
Trigger: GAATCCATCCCCCTGTTTTCAGGGACCTCTGCCTTC...CAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAAGGCAGAGGTCCCTaGAAACAGGGGGATGGATTC +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQEGRGP*KQGDGF
Trigger: GAATCCATCCCCCTGTTTTCAGGGACCTCTGCCTTC...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCAGTCCCCCAGCAACATTaGGCACATGGATCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAVPQQH*AHGSPW
Trigger: CCAGGGAGATCCATGTGCTCAATGTTGCTGGGGGAC...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCCAAGGGCCAAGAACTaGGTTCACTGCACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPPRAKN*VHCTLD
Trigger: GTCCAGGGTGCAGTGAACTCAGTTCTTGGCCCTTGG...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCAGACCACAGGGGCCATaGGCATTCCGGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GASLSCPRLQMVKEKVNVRPQGP*AFRPPR
Trigger: CCTTGGAGGCCGGAATGCTCATGGCCCCTGTGGTCT...GACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGTTTCTAATCCAGCTTTaGGCCCGTCTCCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVFLIQL*ARLQSE
Trigger: CTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAA...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCATCCTGTTGCCATCACTaGCCCAGTCCTGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTASCCHH*PSPDGA
Trigger: GGCTCCATCAGGACTGGGTCAGTGATGGCAACAGGA...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCTCCCGCACAGCCTGTaGAACCTCCATTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQLPHSL*NLHFAT
Trigger: AGTGGCAAAATGGAGGTTTCACAGGCTGTGCGGGAG...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGACCGCCGCCGGGGTTaGCATCTTGCTCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNDRRRG*HLARRG
Trigger: TCCTCTCCGAGCAAGATGGCAACCCCGGCGGCGGTC...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000622346.4
CDS-3UTR GCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGTGGCTTCCGAGCCAGTaGGCTGCATGTGGGGACCAT +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLWLPSQ*AACGDH
Trigger: ATGGTCCCCACATGCAGCGCACTGGCTCGGAAGCCA...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAACGAGGCAATATTTACTaGCTTGTCCCACATCAGCGT +
Preference number: 4 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQRGNIY*LVPHQR
Trigger: ACGCTGATGTGGGACAAGGCAGTAAATATTGCCTCG...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGTTCAGCTTAACCACCTaGTGGAAGCTCTCACGCAGA +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWFSLTT*WKLSRR
Trigger: TCTGCGTGAGAGCTTCCAGCAGGTGGTTAAGCTGAA...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGGTAGGAAGAGGGGTCTaGCGGGTAGGTGTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLVGRGV*RVGVAR
Trigger: ACGAGCCACACCTACCCGGCAGACCCCTCTTCCTAC...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTAGGAAGAGGGGTCTaGCGGGTAGGTGTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKVGRGV*RVGVAR
Trigger: ACGAGCCACACCTACCCGGCAGACCCCTCTTCCTAC...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCGGCCGCCCTTGGAACTaGCCGCTACTTTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: TLALATKARDTYAWKCACGRPWN*PLLCPL
Trigger: AAGTGGACAAAGTAGCGGGCAGTTCCAAGGGCGGCC...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGATGCTGCTCACCGCTCTaGTGGCCATGGTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGCCSPL*WPWCWL
Trigger: AAGCCAGCACCATGGCCAGCAGAGCGGTGAGCAGCA...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCAAGGCGTGCTGTCCTaGAGGCTCTGGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCQGVLS*RLWAGT
Trigger: TGTGCCTGCCCAGAGCCTGCAGGACAGCACGCCTTG...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGGTAGGTCCCTCCATGTaGCCTGCAGCAGCCACGGTA +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWVGPSM*PAAATV
Trigger: TACCGTGGCTGCTGCAGGGCACATGGAGGGACCTAC...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGGGCCCTGGGAGGATGTaGAGGGTTTCAACCACCTGC +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLGPGRM*RVSTTC
Trigger: GCAGGTGGTTGAAACCCTGCACATCCTCCCAGGGCC...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCGTTGCATCCCCTCAGTaGCCAGCACAGCTCCGGATA +
Preference number: 4 (lower is better)
Translates to: IHMGIDITVWVALYSRSLVASPQ*PAQLRI
Trigger: TATCCGGAGCTGTGCTGGGCACTGAGGGGATGCAAC...GAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGGGCTGCCTAAAGTGCTaGCGGGAGTGGGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMGCLKC*REWGDH
Trigger: GTGGTCTCCCCACTCCCGGCAGCACTTTAGGCAGCC...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGATGGGCTGCCTAAAGTaGTGCCGGGAGTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWMGCLK*CREWGD
Trigger: GTCTCCCCACTCCCGGCAGCACTTTAGGCAGCCCAT...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGATGGGCTGCCTAAAGTaGTGCCGGGAGTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLMGCLK*CREWGD
Trigger: GTCTCCCCACTCCCGGCAGCACTTTAGGCAGCCCAT...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCACTACGCTTGGAAATGTaGCTGCACCACTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAALRLEM*LHHCVV
Trigger: CACCACACAGTGGTGCAGGCACATTTCCAAGCGTAG...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CTATCTACATCTGTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTCACTTTCAAGGTCAGTaGCCCACAGACCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LSTSVKKGQASDLKACCPHFQGQ*PTDPGL
Trigger: CAGGCCAGGGTCTGTGGGGCACTGACCTTGAAAGTG...AGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGATGTAGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCCAGTGCGCTGCATGTaGGGACCATGTCGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLPVRCM*GPCRRA
Trigger: AGCTCTCCGACATGGTCCCCACATGCAGCGCACTGG...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGACCAGTGCGCTGCATGTaGGGACCATGTCGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGPVRCM*GPCRRA
Trigger: AGCTCTCCGACATGGTCCCCACATGCAGCGCACTGG...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp ATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCGATGGTGAGCTTGTCTaGCTTCCGAGCCAGTGCGCT +
Preference number: 4 (lower is better)
Translates to: IHMGIDITVWVALYSRSLDGELV*LPSQCA
Trigger: AGCGCACTGGCTCGGAAGCCAGACAAGCTCACCATC...GAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp ATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCCACTCTGACTGGGGCTaGTTCAGAACAGGGGTGACG +
Preference number: 4 (lower is better)
Translates to: IHMGIDITVWVALYSRSLHSDWG*FRTGVT
Trigger: CGTCACCCCTGTTCTGAACCAGCCCCAGTCAGAGTG...GAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCACACTCTGACTGGGGCTaGTTCAGAACAGGGGTGACG +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTAHSDWG*FRTGVT
Trigger: CGTCACCCCTGTTCTGAACCAGCCCCAGTCAGAGTG...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp ATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGCCAAACCACTCTGACTaGGGCTGGTTCAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: MGIDITVWVALYSRSLTLPNHSD*GWFRTG
Trigger: CCCTGTTCTGAACCAGCCCCAGTCAGAGTGGTTTGG...CAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATCCATGCACATCCTCATaGATGACTGCTGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GQAGRGWASFTWASTSQYPCTSS*MTAALL
Trigger: AAGAAGGGCAGCAGTCATCCATGAGGATGTGCATGG...ATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CTGAGGGGCAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACATGTATCCTGTACAGTaGACCACAGCATATTGGGCT +
Preference number: 4 (lower is better)
Translates to: LRGRRLCVSVLLGSSWQNMYPVQ*TTAYWA
Trigger: AGCCCAATATGCTGTGGTCCACTGTACAGGATACAT...GTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTGCCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCGGAGAGCTGGTCACCTaGAGTCTCCCAATTGCCACG +
Preference number: 4 (lower is better)
Translates to: IHMGIDITVWVALYSRSLGELVT*SLPIAT
Trigger: CGTGGCAATTGGGAGACTCCAGGTGACCAGCTCTCC...GAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCTTGGGGACGGGGACCTaGGATAAGTCATACGATGAC +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLLGTGT*DKSYDD
Trigger: GTCATCGTATGACTTATCCCAGGTCCCCGTCCCCAA...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCACCGGCTGGTAGGTTaGGGACGGGGACCTGGGATA +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCHRLVG*GRGPGI
Trigger: TATCCCAGGTCCCCGTCCCCAACCTACCAGCCGGTG...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGATTTGGGACATGTTCTaGCCCGTGGAAGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVIWDMF*PVEEED
Trigger: GTCCTCTTCTTCCACGGGCCAGAACATGTCCCAAAT...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAAGCTGCCGGGAGATTTaGGACATGTTCTGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTASCREI*DMFWPV
Trigger: CACGGGCCAGAACATGTCCCAAATCTCCCGGCAGCT...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGATCCGAGGGCCGCCCTTaGAACTGCCCGCTACTTTGT +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGSEGRP*NCPLLC
Trigger: ACAAAGTAGCGGGCAGTTCCAAGGGCGGCCCTCGGA...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCCCGCTCTGCTGGCCATaGTGCTGGCTTTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETPLCWP*CWLCHC
Trigger: GCAGTGGCAAAGCCAGCACCATGGCCAGCAGAGCGG...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGATCGACATCACAGTATaGGTGGCACTGTACAGCAGG +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVIDITV*VALYSR
Trigger: CCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTGCTGGTGCTGCTTaGTCACTCTGGGCATTGGCT +
Preference number: 4 (lower is better)
Translates to: PHSHGHRHHSMGGTVQQEPAGAA*SLWALA
Trigger: AGCCAATGCCCAGAGTGACCAAGCAGCACCAGCAGG...CTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CTATCTACATCTGTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTCCATGTGAGAAGGCCTaGGCGTCCTACCCTGCTATC +
Preference number: 4 (lower is better)
Translates to: LSTSVKKGQASDLKACCPPCEKA*ASYPAI
Trigger: GATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGG...AGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGATGTAGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGGCAACATTGAGCACATaGATCTCCCTGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: NPALSPSPVREVSAGHGLATLST*ISLARQ
Trigger: CTGTCTGGCCAGGGAGATCCATGTGCTCAATGTTGC...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGTGGGCGGTACTGGCATaGGAGGCTCTTTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQWAVLA*EALLQT
Trigger: GGTTTGCAAAAGAGCCTCCCATGCCAGTACCGCCCA...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTAAGTGCTGCCGGGAGTaGGGAGACCACCATTCATTC +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPKCCRE*GDHHSF
Trigger: GAATGAATGGTGGTCTCCCCACTCCCGGCAGCACTT...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGGTATGGGGTGTTTGGTaGGGAATGACCCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PHSHGHRHHSMGGTVQQEVWGVW*GMTPAG
Trigger: ACCTGCCGGGGTCATTCCCCACCAAACACCCCATAC...CTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTGTATGGGGTGTTTGGTaGGGAATGACCCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPVWGVW*GMTPAG
Trigger: ACCTGCCGGGGTCATTCCCCACCAAACACCCCATAC...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGCATGGCTCCTTAGTATaGGGTGTTTGGTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVHGSLV*GVWWGM
Trigger: CATTCCCCACCAAACACCCCATACTAAGGAGCCATG...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCAGCCTGCACCACTGTGTaGTGCCTCCTTAAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAACTTV*CLLKLP
Trigger: GGGCAACTTAAGGAGGCACCACACAGTGGTGCAGGC...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 72 bp ACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTaGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TSFGHKSQGHLR*EMCLHHCVVPP
Trigger: AGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCCATGCGGAGGATGGTaGGCTTGTCTGGCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCPCGGW*ACLASE
Trigger: CTCGGAAGCCAGACAAGCTCACCATCCTCCGCATGG...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTTCAGTTCCTGCTCTGTaGGGAAGGAAGGCTTGTACG +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPSVPAL*GRKACT
Trigger: CGTACAAGCCTTCCTTCCTCACAGAGCAGGAACTGA...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTGCTGCCCTTCTTTCTTaGCCGTCCCAGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPAALLS*PSQSSG
Trigger: ACCTGAAGACTGGGACGGTCAAGAAAGAAGGGCAGC...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGACCTCATCCTGCAGATaGAAGACCGCCGCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMTSSCR*KTAASP
Trigger: TGGGCTCGCGGCGGTCTTTCATCTGCAGGATGAGGT...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTGGCCAAGGCCATTCCTaGACCTTTTCCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPGQGHS*TFSSWW
Trigger: CCACCATGAGGAAAAGGTTCAGGAATGGCCTTGGCC...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGTCACGCAGATGGCTTTaGTCCTCAGGGTGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQSRRWL*SSGWQN
Trigger: ATTCTGCCACCCTGAGGATCAAAGCCATCTGCGTGA...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGTCCTGCTGCAGAGGCTaGGCTCATCATCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQSCCRG*AHHLLL
Trigger: GAGAAGAAGATGATGAGCTCAGCCTCTGCAGCAGGA...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGGAACCACTGAAGAGCTaGAGGCCTTCCCGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPEPLKS*RPSRSV
Trigger: GACACTCCGGGAAGGCCTTCAGCTCTTCAGTGGTTC...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GCCTCTCCCCTTTCTAATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTAGGCACATGAACCACTaGAGAGCTGAAGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: ASPLSNPALSPSPVREVSRHMNH*RAEGLP
Trigger: GGGAAGGCCTTCAGCTCTTCAGTGGTTCATGTGCCT...AGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTAGTGGAAGAAGAGGACTaGATATCATTCACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RASRARVGLIHMGIDITVVEEED*ISFTPG
Trigger: GCCTGGAGTGAATGATATTCAGTCCTCTTCTTCCAC...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp CAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGGGCTGCTCTTGTTCTTGTCTTaGGACCACCAGAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: QAPLCLCASWLQLAERGLLLFLS*DHQRNS
Trigger: TGAATTTCTCTGGTGGTCTCAAGACAAGAACAAGAG...CAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCAAGCAAGAAAGCCTCTaGGGTTGGAGTGAACACTGC +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLKQESL*GWSEHC
Trigger: GCAGTGTTCACTCCAACCTCAGAGGCTTTCTTGCTT...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGCTGCTGGGCATGGGCTaGAGGACAAGCAGACCACAG +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMLLGMG*RTSRPQ
Trigger: CTGTGGTCTGCTTGTCCTTCAGCCCATGCCCAGCAG...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCCGTGACGGAGCAAGGTaGGCGTTCACATTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: TLALATKARDTYAWKCACRDGAR*AFTFSH
Trigger: ATGCGAGAATGTGAACGCTCACCTTGCTCCGTCACG...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCCGTGACGGAGCAAGGTaGGCGTTCACATTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCRDGAR*AFTFSH
Trigger: ATGCGAGAATGTGAACGCTCACCTTGCTCCGTCACG...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGTTTGGTGGGGAATaGCCCCGGCAGGTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKVFGGE*PRQVRR
Trigger: TCTCCTAACCTGCCGGGGTCATTCCCCACCAAACAC...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCCTCCCGCACAGCCTGTaGAACCTCCATTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCLPHSL*NLHFAT
Trigger: AGTGGCAAAATGGAGGTTTCACAGGCTGTGCGGGAG...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCAACTGAGATTGTTAGATaGAGCAAGCCGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAATEIVR*SKPSCS
Trigger: GGAGCAGGACGGCTTGCTTCATCTAACAATCTCAGT...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGAGAGATGACAAGGCCTaGATGATGGAGCCGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ECSRAILGHPVAITDPVLRDDKA*MMEPQG
Trigger: TCCTTGCGGCTCCATCATTCAGGCCTTGTCATCTCT...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533983.5
CDS-3UTR GCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGACCGCCGCGAGCCCATaGACATCCTCATGGATGACT +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPTAASP*TSSWMT
Trigger: AGTCATCCATGAGGATGTGCATGGGCTCGCGGCGGT...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATTCCCATTCATGTCCATaGATACAGGAGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GQAGRGWASFTWASTSQYSHSCP*IQESWS
Trigger: TGACCAGCTCTCCTGTATGCATGGACATGAATGGGA...ATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGTGCACTTCCAATTCTaGCTGCTGTTGCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVVHFQF*LLLLKL
Trigger: CAACTTCAGCAACAGCAGGCAGAATTGGAAGTGCAC...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATAATCCATCTCTCTGGTaGACTTCCAATTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GQAGRGWASFTWASTSQYNPSLW*TSNSAC
Trigger: GCAGGCAGAATTGGAAGTGCACCAGAGAGATGGATT...ATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGGGCCGCCCTTGGAACTaGCCGCTACTTTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLGRPWN*PLLCPL
Trigger: AAGTGGACAAAGTAGCGGGCAGTTCCAAGGGCGGCC...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCTGCTCACCGCTCTaGTGGCCATGGTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMCCSPL*WPWCWL
Trigger: AAGCCAGCACCATGGCCAGCAGAGCGGTGAGCAGCA...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGGCAGAACGAGGGCTGTaGACTCTGCTTGCCCATTTT +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQAERGL*TLLAHF
Trigger: AAAATGGGCAAGCAGAGTGCACAGCCCTCGTTCTGC...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGGTTGGAGTGAACACTaGATGCATCTACAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWGWSEH*MHLQWR
Trigger: TCTCCACTGTAGATGCATGCAGTGTTCACTCCAACC...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGCTGCATCTGTGTCCTTaGTGCCGGCCCGGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMLHLCP*CRPGLS
Trigger: TGACAACCCGGGCCGGCAGCAAGGACACAGATGCAG...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCGAGCCTTACTGTGGCTaGATCTGTGTCCTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: IHMGIDITVWVALYSRSLEPYCG*ICVLAA
Trigger: GGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTC...GAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGAGCCTTACTGTGGCTaGATCTGTGTCCTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTAEPYCG*ICVLAA
Trigger: GGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTC...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCTGCACCACTGTGTGGTaGCTCCTTAAGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCCTTVW*LLKLPQ
Trigger: CTGGGGCAACTTAAGGAGGCACCACACAGTGGTGCA...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACTTTCAAGGTCAGTaGCCCACAGACCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLHFQGQ*PTDPGL
Trigger: CAGGCCAGGGTCTGTGGGGCACTGACCTTGAAAGTG...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGGGAGGAAATGTAGCTaGATTTGTATTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GRASRARVGLIHMGIDITGRKCS*ICILLR
Trigger: TCTCAGCAGAATACAAATGCAGCTACATTTCCTCCC...TGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGTCCCTGTACCCCTCATaGACTTCATGTGCGAGACGG +
Preference number: 4 (lower is better)
Translates to: PHSHGHRHHSMGGTVQQESLYPS*TSCARR
Trigger: CCGTCTCGCACATGAAGTCCATGAGGGGTACAGGGA...CTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGTACGCGCCATCGGTaGACTTGTTCCCTGTACCCC +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPCTRHR*TCSLYP
Trigger: GGGGTACAGGGAACAAGTCCACCGATGGCGCGTACA...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCCAAACCACTCTGACTaGGGCTGGTTCAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPPNHSD*GWFRTG
Trigger: CCCTGTTCTGAACCAGCCCCAGTCAGAGTGGTTTGG...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGTATGGTCATTCCTGCTaGTGGCCAGGCCTTGATGTA +
Preference number: 4 (lower is better)
Translates to: NPALSPSPVREVSAGHGLYGHSC*WPGLDV
Trigger: TACATCAAGGCCTGGCCACCAGCAGGAATGACCATA...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGGGAGAGCTGGTCACCTaGAGTCTCCCAATTGCCACG +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPGELVT*SLPIAT
Trigger: CGTGGCAATTGGGAGACTCCAGGTGACCAGCTCTCC...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGAGCTTAACCACCTGCTaGAAGCTCTCACGCAGATGG +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQSLTTC*KLSRRW
Trigger: CCATCTGCGTGAGAGCTTCCAGCAGGTGGTTAAGCT...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTAGACAATCCATCTCTCTaGTGCACTTCCAATTCTGCC +
Preference number: 4 (lower is better)
Translates to: RASRARVGLIHMGIDITVDNPSL*CTSNSA
Trigger: GGCAGAATTGGAAGTGCACCAGAGAGATGGATTGTC...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGAGCTGCCGGGAGATTTaGGACATGTTCTGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLSCREI*DMFWPV
Trigger: CACGGGCCAGAACATGTCCCAAATCTCCCGGCAGCT...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGAAGCTGCCGGGAGATTTaGGACATGTTCTGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGSCREI*DMFWPV
Trigger: CACGGGCCAGAACATGTCCCAAATCTCCCGGCAGCT...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCACTTTCAGCGAACCCTaGAGTCCTGTTGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLTFSEP*SPVGKT
Trigger: AGTCTTGCCAACAGGACTCCAGGGTTCGCTGAAAGT...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCTGCTGGCCATGGTGCTaGCTTTGCCACTGCGACCAG +
Preference number: 4 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETCWPWC*LCHCDQ
Trigger: CTGGTCGCAGTGGCAAAGCCAGCACCATGGCCAGCA...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATCCGCTCTGCTGGCCATaGTGCTGGCTTTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNPLCWP*CWLCHC
Trigger: GCAGTGGCAAAGCCAGCACCATGGCCAGCAGAGCGG...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCTGCTCACCGCTCTGCTaGCCATGGTGCTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GASLSCPRLQMVKEKVNVCSPLC*PWCWLC
Trigger: GCAAAGCCAGCACCATGGCCAGCAGAGCGGTGAGCA...GACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTTTGGATCTCCTGGCATaGGCAGCATGTCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPLDLLA*AACPGT
Trigger: TGTTCCAGGACATGCTGCCCATGCCAGGAGATCCAA...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp ATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGCTACTCAGAAAACGGTaGAAACATGCCCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: MGIDITVWVALYSRSLTLLLRKR*KHAQVG
Trigger: GCCGACCTGGGCATGTTTCCACCGTTTTCTGAGTAG...CAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGCCTGCTGGTGCTGCTTaGTCACTCTGGGCATTGGCT +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKPAGAA*SLWALA
Trigger: AGCCAATGCCCAGAGTGACCAAGCAGCACCAGCAGG...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCAGGGCCACACATTTTaGCTCTCTACATACTCTGGA +
Preference number: 4 (lower is better)
Translates to: ASTSQYGWHCTAGASLWPQGHTF*LSTYSG
Trigger: TCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTG...CGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGAGCAACCTCTGGTCATaGCCGGTGGTGCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWSNLWS*PVVLSL
Trigger: CAAGCTCAGCACCACCGGCCATGACCAGAGGTTGCT...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGGGCTGGGGTTTAATGTaGAGCTTTCAATGGATCACA +
Preference number: 4 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWGWGLM*SFQWIT
Trigger: TGTGATCCATTGAAAGCTCCACATTAAACCCCAGCC...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGAAGAAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGGCAACATTGAGCACATaGATCTCCCTGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: WKKVFHGAHVRRPGRPTLATLST*ISLARQ
Trigger: CTGTCTGGCCAGGGAGATCCATGTGCTCAATGTTGC...CAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCCTCTCCCCTTTCTAATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCAGTCATGCACAGCTaGCGACCAGCCAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: ASPLSNPALSPSPVREVSAVMHS*RPAKGI
Trigger: AATGCCTTTGGCTGGTCGCCAGCTGTGCATGACTGC...AGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGGAAGGGAAGGAGGCTaGGCCTATTTAGTCATAATG +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWGREGG*AYLVIM
Trigger: CATTATGACTAAATAGGCCCAGCCTCCTTCCCTTCC...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGAAGGCTGGGCGGTACTaGCATGGGAGGCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPKAGRY*HGRLFC
Trigger: GCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTT...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGCAGAGAGGTATCTGCTaGGCATGGGCTGAAGGACAA +
Preference number: 4 (lower is better)
Translates to: ECSRAILGHPVAITDPVLQRGIC*AWAEGQ
Trigger: TTGTCCTTCAGCCCATGCCCAGCAGATACCTCTCTG...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGTACAGACCTCTTCAGTaGGGAGCTGTCTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQYRPLQ*GAVCLP
Trigger: AGGCAAGCAGACAGCTCCCCACTGAAGAGGTCTGTA...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGAGTATGGGGTGTTTGGTaGGGAATGACCCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGVWGVW*GMTPAG
Trigger: ACCTGCCGGGGTCATTCCCCACCAAACACCCCATAC...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp ATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCGTGCCCCACAGACCCTaGCCTGTTGTTGACCATAAC +
Preference number: 4 (lower is better)
Translates to: IHMGIDITVWVALYSRSLVPHRP*PVVDHN
Trigger: GTTATGGTCAACAACAGGCCAGGGTCTGTGGGGCAC...GAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCGTGCCCCACAGACCCTaGCCTGTTGTTGACCATAAC +
Preference number: 4 (lower is better)
Translates to: TLALATKARDTYAWKCACVPHRP*PVVDHN
Trigger: GTTATGGTCAACAACAGGCCAGGGTCTGTGGGGCAC...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTATTCCTTGGATCTCCTaGCATGGGCAGCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPIPWIS*HGQHVL
Trigger: CAGGACATGCTGCCCATGCCAGGAGATCCAAGGAAT...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622346.4
3UTR CAA 72 bp GAGCAATGTTTGACTTTTGTAGGTCCCCCAGCAACATaGAGCACATGGATCTCCCTGGCCAGACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EQCLTFVGPPAT*STWISLARQGW
Trigger: CCAGCCCTGTCTGGCCAGGGAGATCCATGTGCTCAATGTTGCTGGGGGACCTACAAAAGTCAAACATTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 72 bp GTAGACGTTGGGAGCAAGGATCCTCTCCTAATTTTGTaGCATCCCCTCAGTGCCCAGCACAGCTCCGGATAC +
Preference number: 4 (lower is better)
Translates to: VDVGSKDPLLIL*HPLSAQHSSGY
Trigger: GTATCCGGAGCTGTGCTGGGCACTGAGGGGATGCAACAAAATTAGGAGAGGATCCTTGCTCCCAACGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 72 bp GAAGTAGACGTTGGGAGCAAGGATCCTCTCCTAATTTaGTTGCATCCCCTCAGTGCCCAGCACAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: EVDVGSKDPLLI*LHPLSAQHSSG
Trigger: TCCGGAGCTGTGCTGGGCACTGAGGGGATGCAACAAAATTAGGAGAGGATCCTTGCTCCCAACGTCTACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTTGTCGGAGAGCTCCGTaGTGTACTGAGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: HGHRHHSMGGTVQQEPHSCRRAP*CTESSC
Trigger: ACAAGATGACTCAGTACATCACGGAGCTCTCCGACA...AGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGTGTCGGAGAGCTCCGTaGTGTACTGAGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQCRRAP*CTESSC
Trigger: ACAAGATGACTCAGTACATCACGGAGCTCTCCGACA...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCGCTCCCAAACCACTCTaGCTGGGGCTGGTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCAPKPL*LGLVQN
Trigger: GTTCTGAACCAGCCCCAGTCAGAGTGGTTTGGGAGC...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGCTGCCCTTCTTTCTTaGCCGTCCCAGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKAALLS*PSQSSG
Trigger: ACCTGAAGACTGGGACGGTCAAGAAAGAAGGGCAGC...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGGTAGCCAATCACACTaGTACATCTTGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWGSQSH*YILDPQ
Trigger: TTGTGGATCCAAGATGTATCAGTGTGATTGGCTACC...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp CATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTTGCGAAATCGATACATaGCCGACAGGACTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HGHRHHSMGGTVQQEPHSCEIDT*PTGLGL
Trigger: AAGGCCAAGTCCTGTCGGTCATGTATCGATTTCGCA...AGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGTGCGAAATCGATACATaGCCGACAGGACTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ECSRAILGHPVAITDPVLCEIDT*PTGLGL
Trigger: AAGGCCAAGTCCTGTCGGTCATGTATCGATTTCGCA...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGAGGCACATGAACCACTaGAGAGCTGAAGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLRHMNH*RAEGLP
Trigger: GGGAAGGCCTTCAGCTCTTCAGTGGTTCATGTGCCT...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGTTCACTCCAGGCACATaGACCACTGAAGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQFTPGT*TTEELK
Trigger: CTTCAGCTCTTCAGTGGTTCATGTGCCTGGAGTGAA...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGGTGGAAGAAGAGGACTaGATATCATTCACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: NPALSPSPVREVSAGHGLVEEED*ISFTPG
Trigger: GCCTGGAGTGAATGATATTCAGTCCTCTTCTTCCAC...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGTGCATCCATCAGAAGTaGAATCAAGAAGAAATCTGC +
Preference number: 4 (lower is better)
Translates to: VKKGQASDLKACCPAGSGCIHQK*NQEEIC
Trigger: GCAGATTTCTTCTTGATTTCACTTCTGATGGATGCA...CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCTTGGACCAAAGAACTaGCCTACCCATGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPLGPKN*PTHVSM
Trigger: CATGCTCACATGGGTAGGTCAGTTCTTTGGTCCAAG...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGCTGCGAGGGCCTACCTaGAGGACTCTGGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITLRGPT*RTLGGT
Trigger: TGTCCCTCCCAGAGTCCTTCAGGTAGGCCCTCGCAG...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGTTTCTAATCCAGCTTTaGGCCCGTCTCCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ECSRAILGHPVAITDPVLFLIQL*ARLQSE
Trigger: CTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAA...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGAAGCTAGAAGGACACTaGTGTTTGCATGTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: ASTSQYGWHCTAGASLWPKLEGH*CLHVWL
Trigger: TAGCCACACATGCAAACATCAGTGTCCTTCTAGCTT...CGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCGTGACGGAGCAAGGTaGGCGTTCACATTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLRDGAR*AFTFSH
Trigger: ATGCGAGAATGTGAACGCTCACCTTGCTCCGTCACG...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCTCACAGCAGTCCAGGTaGGAGATGACAAGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCSQQSR*EMTRPE
Trigger: TTCAGGCCTTGTCATCTCTCACCTGGACTGCTGTGA...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533983.5
CDS-3UTR TCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTTCTCCTGGGAATGAATaGAGGTCACAGCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPSPGNE*RSQQSR
Trigger: CCTGGACTGCTGTGACCTTCATTCATTCCCAGGAGA...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533983.5
CDS-3UTR TCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGGACTTCTCCTGGGAATaGATGAAGGTCACAGCAGTC +
Preference number: 4 (lower is better)
Translates to: ECSRAILGHPVAITDPVLDFSWE*MKVTAV
Trigger: GACTGCTGTGACCTTCATTCATTCCCAGGAGAAGTC...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533983.5
CDS-3UTR GCA 90 bp GGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCTCATGGACTTCATGTaGGAGACGGCCATGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GASLSCPRLQMVKEKVNVLMDFM*ETAMRR
Trigger: CCTCCGCATGGCCGTCTCGCACATGAAGTCCATGAG...GACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp ATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGAGATGCTTCAGTTCCTaGTCTGTGAGGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: MGIDITVWVALYSRSLTLRCFSS*SVRKEG
Trigger: GCCTTCCTTCCTCACAGAGCAGGAACTGAAGCATCT...CAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp ATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCACCTGTTCATACAGTGTaGTCCCAAACCACTCTGACT +
Preference number: 4 (lower is better)
Translates to: IDITVWVALYSRSLTLAAPVHTV*SQTTLT
Trigger: AGTCAGAGTGGTTTGGGAGCACACTGTATGAACAGG...TGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCTCATGGATGACTGCTaGCCTTCTTTCTTGACCGTC +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQLMDDC*PSFLTV
Trigger: GACGGTCAAGAAAGAAGGGCAGCAGTCATCCATGAG...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCACCGCCGCGAGCCCATaGACATCCTCATGGATGACT +
Preference number: 4 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETTAASP*TSSWMT
Trigger: AGTCATCCATGAGGATGTGCATGGGCTCGCGGCGGT...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCAGGTATGGTCATTCCTaGTGGTGGCCAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCRYGHS*WWPGLD
Trigger: ATCAAGGCCTGGCCACCAGCAGGAATGACCATACCT...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGTTCAGCTTAACCACCTaGTGGAAGCTCTCACGCAGA +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQFSLTT*WKLSRR
Trigger: TCTGCGTGAGAGCTTCCAGCAGGTGGTTAAGCTGAA...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTTTCCTGGGAGAAGATTaGATCCGCCTTTTCCACGGA +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPFLGED*IRLFHG
Trigger: TCCGTGGAAAAGGCGGATGCAATCTTCTCCCAGGAA...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGCGATGCACTAATTCCTaGAAACATTTCAGCAAACCG +
Preference number: 4 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWRCTNS*KHFSKP
Trigger: CGGTTTGCTGAAATGTTTGCAGGAATTAGTGCATCG...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCGGCCGCCCTTGGAACTaGCCGCTACTTTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETGRPWN*PLLCPL
Trigger: AAGTGGACAAAGTAGCGGGCAGTTCCAAGGGCGGCC...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCCATGGTGCTGGCTTTaGCACTGCGACCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCPWCWL*HCDQTS
Trigger: GGAAGTCTGGTCGCAGTGGCAAAGCCAGCACCATGG...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGTGCTGGTGGGAGTGCTaGTCACCGCTCTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITCWWEC*SPLCWP
Trigger: TGGCCAGCAGAGCGGTGAGCAGCACTCCCACCAGCA...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACGAGGGCTGAAGTCCATGTCACACTaGACAAATTACATATGTCCC +
Preference number: 4 (lower is better)
Translates to: QAPLCLCASWLQLAERGLKSMSH*TNYICP
Trigger: GGGACATATGTAATTTGTGCAGTGTGACATGGACTT...CAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGGAGACCTGCACTCTGTaGCTCCCAGAGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMETCTL*LPELLF
Trigger: GAACAGCAGCTCTGGGAGGCACAGAGTGCAGGTCTC...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGGGTGCCTCCTTAAGTTaGCCCAGACTCCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLGASLS*PRLQMV
Trigger: GACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGATGCACCACTGTGTGGTaGCTCCTTAAGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGCTTVW*LLKLPQ
Trigger: CTGGGGCAACTTAAGGAGGCACCACACAGTGGTGCA...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCACTTTCAAGGTCAGTaGCCCACAGACCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCHFQGQ*PTDPGL
Trigger: CAGGCCAGGGTCTGTGGGGCACTGACCTTGAAAGTG...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCGATGGTGAGCTTGTCTaGCTTCCGAGCCAGTGCGCT +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCDGELV*LPSQCA
Trigger: AGCGCACTGGCTCGGAAGCCAGACAAGCTCACCATC...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGTACGCGCCATCGGTaGACTTGTTCCCTGTACCCC +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMCTRHR*TCSLYP
Trigger: GGGGTACAGGGAACAAGTCCACCGATGGCGCGTACA...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCACTCTGACTGGGGCTaGTTCAGAACAGGGGTGACG +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCHSDWG*FRTGVT
Trigger: CGTCACCCCTGTTCTGAACCAGCCCCAGTCAGAGTG...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGCCAAACCACTCTGACTaGGGCTGGTTCAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWPNHSD*GWFRTG
Trigger: CCCTGTTCTGAACCAGCCCCAGTCAGAGTGGTTTGG...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGCTGTTTAGAGGAAGGTaGTCCAAAGGAGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVLFRGR*SKGAFP
Trigger: TGGAAATGCTCCTTTGGACCACCTTCCTCTAAACAG...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCCGTCTTCTTCAGGTATaGTCATTCCTGCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TLALATKARDTYAWKCACRLLQV*SFLLVA
Trigger: GGCCACCAGCAGGAATGACCATACCTGAAGAAGACG...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCCGTCTTCTTCAGGTATaGTCATTCCTGCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCRLLQV*SFLLVA
Trigger: GGCCACCAGCAGGAATGACCATACCTGAAGAAGACG...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGGGAGAGCTGGTCACCTaGAGTCTCCCAATTGCCACG +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMGELVT*SLPIAT
Trigger: CGTGGCAATTGGGAGACTCCAGGTGACCAGCTCTCC...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GCCTCTCCCCTTTCTAATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTTGCATACAGGAGAGCTaGTCACCTGGAGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: ASPLSNPALSPSPVREVSCIQES*SPGVSQ
Trigger: TTGGGAGACTCCAGGTGACCAGCTCTCCTGTATGCA...AGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGGGATAAGAACTCTGTaGGCACCGACATCCCATTCA +
Preference number: 4 (lower is better)
Translates to: MGIDITVWVALYSRSLTLGIRTL*APTSHS
Trigger: TGAATGGGATGTCGGTGCCCACAGAGTTCTTATCCC...CAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGACATGTTCTGGCCCGTaGAAGAAGAGGACTGAATAT +
Preference number: 4 (lower is better)
Translates to: SRARVGLIHMGIDITVWVTCSGP*KKRTEY
Trigger: ATATTCAGTCCTCTTCTTCCACGGGCCAGAACATGT...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGTCCTGTTGGCAAGACTaGAGTAGGCATTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQSCWQD*SRHSHL
Trigger: CAAGTGGGAATGCCTACTCCAGTCTTGCCAACAGGA...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGACCCTGGAGTCCTGTTaGCAAGACTGGAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: PHSHGHRHHSMGGTVQQETLESC*QDWSRH
Trigger: ATGCCTACTCCAGTCTTGCCAACAGGACTCCAGGGT...CTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTACTTTCAGCGAACCCTaGAGTCCTGTTGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPTFSEP*SPVGKT
Trigger: AGTCTTGCCAACAGGACTCCAGGGTTCGCTGAAAGT...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCATTGGATCTCCTGGCATaGGCAGCATGTCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTALDLLA*AACPGT
Trigger: TGTTCCAGGACATGCTGCCCATGCCAGGAGATCCAA...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTTTGGATCTCCTGGCATaGGCAGCATGTCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPLDLLA*AACPGT
Trigger: TGTTCCAGGACATGCTGCCCATGCCAGGAGATCCAA...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp GCCTCTCCCCTTTCTAATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTTGTCTCTGTGCTTCTTaGCTCCAGCTGGCAGAACGA +
Preference number: 4 (lower is better)
Translates to: ASPLSNPALSPSPVREVSCLCAS*LQLAER
Trigger: TCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACA...AGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGAAGAAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGGAACGAAGGCTCAGGTaGCCTGGAAGAAAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: WKKVFHGAHVRRPGRPTLERRLR*PGRKCF
Trigger: GAAACACTTTCTTCCAGGCCACCTGAGCCTTCGTTC...CAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCTGGCAGAACCAGAACTaGAACCCATGTCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: IHMGIDITVWVALYSRSLWQNQN*NPCLLP
Trigger: GGGCAGAAGACATGGGTTCCAGTTCTGGTTCTGCCA...GAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCCTACCTGAAGGACTCTaGGAGGGACACAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCLPEGL*EGHKGF
Trigger: AAAGCCCTTGTGTCCCTCCCAGAGTCCTTCAGGTAG...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTGGCCCATTCTGGGGCTaGCCCTGGGAGGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPGPFWG*PWEDVQ
Trigger: CTGCACATCCTCCCAGGGCCAGCCCCAGAATGGGCC...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCCAGAGAGGTATCTGCTaGGCATGGGCTGAAGGACAA +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCQRGIC*AWAEGQ
Trigger: TTGTCCTTCAGCCCATGCCCAGCAGATACCTCTCTG...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCATGTCCAGGTGGCTCATaGCTCCTTAGTATGGGGTGT +
Preference number: 4 (lower is better)
Translates to: ASLHSQVPRTNATLLGPACPGGS*LLSMGC
Trigger: ACACCCCATACTAAGGAGCCATGAGCCACCTGGACA...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCTGTCCAGGTGGCTCATaGCTCCTTAGTATGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TLALATKARDTYAWKCACCPGGS*LLSMGC
Trigger: ACACCCCATACTAAGGAGCCATGAGCCACCTGGACA...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCGCCTGCACCACTGTGTaGTGCCTCCTTAAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: GASLSCPRLQMVKEKVNVACTTV*CLLKLP
Trigger: GGGCAACTTAAGGAGGCACCACACAGTGGTGCAGGC...GACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGAGTGCCCCACAGACCCTaGCCTGTTGTTGACCATAAC +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGVPHRP*PVVDHN
Trigger: GTTATGGTCAACAACAGGCCAGGGTCTGTGGGGCAC...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCCCACCATTCATTCCTTaGATCTCCTGGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCPPFIP*ISWHGQ
Trigger: CTGCCCATGCCAGGAGATCCAAGGAATGAATGGTGG...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622346.4
3UTR CAA 72 bp AAAGTCACAAGTGCCTCTCCCCTTTCTAATCCAGCTTaGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KVTSASPLSNPA*SPSPVREVSAG
Trigger: CCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGCACTTGTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCATGTCGGAGAGCTCCGTaGTGTACTGAGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTACRRAP*CTESSC
Trigger: ACAAGATGACTCAGTACATCACGGAGCTCTCCGACA...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCTGTCGGAGAGCTCCGTaGTGTACTGAGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: TLALATKARDTYAWKCACCRRAP*CTESSC
Trigger: ACAAGATGACTCAGTACATCACGGAGCTCTCCGACA...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGTCAGTTCCTGCTCTGTaGGGAAGGAAGGCTTGTACG +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKSVPAL*GRKACT
Trigger: CGTACAAGCCTTCCTTCCTCACAGAGCAGGAACTGA...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGTCTGCCTGCTGTTGCTaGAGTTGCTTGACGTTGGTG +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLSACCC*SCLTLV
Trigger: CACCAACGTCAAGCAACTTCAGCAACAGCAGGCAGA...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTCCTGCTGCAGAGGCTaGGCTCATCATCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPSCCRG*AHHLLL
Trigger: GAGAAGAAGATGATGAGCTCAGCCTCTGCAGCAGGA...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTAATCCCAAAGGGAGATaGCTGAGTCTTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPNPKGR*LSLAGL
Trigger: CAGTCCAGCAAGACTCAGTCATCTCCCTTTGGGATT...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGTACAATAAATACAACTaGTCCCCTAATGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWYNKYN*SPNVCQ
Trigger: CTGGCAGACATTAGGGGATCAGTTGTATTTATTGTA...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGCCAGTGGGGCAAGGATaGGACATGCTTATGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPPVGQG*DMLMWD
Trigger: ATCCCACATAAGCATGTCTCATCCTTGCCCCACTGG...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGTGGGAGTCAGTGGGCTaGTGGGCTGGTGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKWESVG*WAGDKK
Trigger: TTTCTTATCACCAGCCCATCAGCCCACTGACTCCCA...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GCCTCTCCCCTTTCTAATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTCCTCTGAGGTTGGAGTaGACACTGCATGCATCTACA +
Preference number: 4 (lower is better)
Translates to: ASPLSNPALSPSPVREVSPLRLE*TLHAST
Trigger: TGTAGATGCATGCAGTGTTCACTCCAACCTCAGAGG...AGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCTATCTCCTCTGAGGTTGGAGTaGACACTGCATGCATCTACA +
Preference number: 4 (lower is better)
Translates to: KVFHGAHVRRPGRPTLLSPLRLE*TLHAST
Trigger: TGTAGATGCATGCAGTGTTCACTCCAACCTCAGAGG...AGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCACCCTGGACCCCTGTTaGGGTAGGAGAAGTAGACGT +
Preference number: 4 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETTLDPC*GRRSRR
Trigger: ACGTCTACTTCTCCTACCTCAACAGGGGTCCAGGGT...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCAAGCTAGAAGGACACTaGTGTTTGCATGTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLKLEGH*CLHVWL
Trigger: TAGCCACACATGCAAACATCAGTGTCCTTCTAGCTT...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGGTAGGTCAGAACCGTaGCGGAGCAAGGTGAGCGTT +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNGRSEP*RSKVSV
Trigger: AACGCTCACCTTGCTCCGTCACGGTTCTGACCTACC...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGTGGCTTCCGAGCCAGTaGGCTGCATGTGGGGACCAT +
Preference number: 4 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITWLPSQ*AACGDH
Trigger: ATGGTCCCCACATGCAGCGCACTGGCTCGGAAGCCA...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGAGATGCTTCAGTTCCTaGTCTGTGAGGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PHSHGHRHHSMGGTVQQERCFSS*SVRKEG
Trigger: GCCTTCCTTCCTCACAGAGCAGGAACTGAAGCATCT...CTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTTCCCATTCATGTCCATaGATACAGGAGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPSHSCP*IQESWS
Trigger: TGACCAGCTCTCCTGTATGCATGGACATGAATGGGA...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp TGGAAGAAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGAATCCATCTCTCTGGTaGACTTCCAATTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: WKKVFHGAHVRRPGRPTLNPSLW*TSNSAC
Trigger: GCAGGCAGAATTGGAAGTGCACCAGAGAGATGGATT...CAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCATTCCTGGGAGAAGATTaGATCCGCCTTTTCCACGGA +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTAFLGED*IRLFHG
Trigger: TCCGTGGAAAAGGCGGATGCAATCTTCTCCCAGGAA...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCGAGATGACTGAGTCTTaGTGGACTGAGATGGGATTT +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLEMTES*WTEMGF
Trigger: AAATCCCATCTCAGTCCAGCAAGACTCAGTCATCTC...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACAGAGGGCTGTGCACTCTaGTTGCCCATTTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTEGCAL*LPIFPA
Trigger: TGCTGGGAAAATGGGCAAGCAGAGTGCACAGCCCTC...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTGGGAGGAGGGTGAGTaGTCCCTTGGGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSWEEGE*SLGAPV
Trigger: CACAGGAGCCCCAAGGGAGCACTCACCCTCCTCCCA...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGAAGAAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGGGCAAGGATGAGACATaGTTATGTGGGATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WKKVFHGAHVRRPGRPTLGKDET*LCGIRN
Trigger: GTTCCTGATCCCACATAAGCATGTCTCATCCTTGCC...CAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCGAAAGTGTTTCATGGTaGCCATGTGAGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TLALATKARDTYAWKCACESVSW*PCEKAW
Trigger: CCAGGCCTTCTCACATGGGCACCATGAAACACTTTC...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CTATCTACATCTGTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTTTAGAGTCTAGGAACTaGAGTCATGCACAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LSTSVKKGQASDLKACCPLESRN*SHAQLA
Trigger: CGCCAGCTGTGCATGACTGCAGTTCCTAGACTCTAA...AGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGATGTAGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCTATCTGGAGTGAACACTGCATaGATCTACAGTGGAGACCCA +
Preference number: 4 (lower is better)
Translates to: KVFHGAHVRRPGRPTLLSGVNTA*IYSGDP
Trigger: TGGGTCTCCACTGTAGATGCATGCAGTGTTCACTCC...AGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCGGTGCCTCCTTAAGTTaGCCCAGACTCCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: GASLSCPRLQMVKEKVNVGASLS*PRLQMV
Trigger: GACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC...GACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACATCCCTGTACCCCTCATaGACTTCATGTGCGAGACGG +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTSLYPS*TSCARR
Trigger: CCGTCTCGCACATGAAGTCCATGAGGGGTACAGGGA...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCTCCCTGTACCCCTCATaGACTTCATGTGCGAGACGG +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCSLYPS*TSCARR
Trigger: CCGTCTCGCACATGAAGTCCATGAGGGGTACAGGGA...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTGTTTAGAGGAAGGTaGTCCAAAGGAGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLLFRGR*SKGAFP
Trigger: TGGAAATGCTCCTTTGGACCACCTTCCTCTAAACAG...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGTGCATACAGGAGAGCTaGTCACCTGGAGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWCIQES*SPGVSQ
Trigger: TTGGGAGACTCCAGGTGACCAGCTCTCCTGTATGCA...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGCATACAGGAGAGCTaGTCACCTGGAGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPCIQES*SPGVSQ
Trigger: TTGGGAGACTCCAGGTGACCAGCTCTCCTGTATGCA...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCGGGATAAGAACTCTGTaGGCACCGACATCCCATTCA +
Preference number: 4 (lower is better)
Translates to: TLALATKARDTYAWKCACGIRTL*APTSHS
Trigger: TGAATGGGATGTCGGTGCCCACAGAGTTCTTATCCC...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGAGCTTAACCACCTGCTaGAAGCTCTCACGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWSLTTC*KLSRRW
Trigger: CCATCTGCGTGAGAGCTTCCAGCAGGTGGTTAAGCT...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTATGACCGACAGGACTTaGCCTTTCAGCTTAACCACC +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPMTDRT*PFSLTT
Trigger: GGTGGTTAAGCTGAAAGGCCAAGTCCTGTCGGTCAT...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCGAGGATCTCTTTCCTaGGAGAAGATTGCATCCGCC +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLRGSLS*EKIASA
Trigger: GGCGGATGCAATCTTCTCCCAGGAAAGAGATCCTCG...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGCGAGGATCTCTTTCCTaGGAGAAGATTGCATCCGCC +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWRGSLS*EKIASA
Trigger: GGCGGATGCAATCTTCTCCCAGGAAAGAGATCCTCG...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAATTTGGGACATGTTCTaGCCCGTGGAAGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTAIWDMF*PVEEED
Trigger: GTCCTCTTCTTCCACGGGCCAGAACATGTCCCAAAT...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCATTTGGGACATGTTCTaGCCCGTGGAAGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCIWDMF*PVEEED
Trigger: GTCCTCTTCTTCCACGGGCCAGAACATGTCCCAAAT...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCTCCTGTTGGCAAGACTaGAGTAGGCATTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: TLALATKARDTYAWKCACSCWQD*SRHSHL
Trigger: CAAGTGGGAATGCCTACTCCAGTCTTGCCAACAGGA...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp ATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGTGGGCCTCATTCACATaGGCATCGACATCACAGTAT +
Preference number: 4 (lower is better)
Translates to: MGIDITVWVALYSRSLTLWASFT*ASTSQY
Trigger: ATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA...CAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATCTTCTTGGCTCCAGCTaGCAGAACGAGGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNLLGSS*QNEGCA
Trigger: TGCACAGCCCTCGTTCTGCCAGCTGGAGCCAAGAAG...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGTGTCTCTGTGCTTCTTaGCTCCAGCTGGCAGAACGA +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKCLCAS*LQLAER
Trigger: TCGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACA...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCATCTGCACCAGAGGCTTaGACCAAAGAACTGACCTAC +
Preference number: 4 (lower is better)
Translates to: WASFTWASTSQYGWHCTASAPEA*TKELTY
Trigger: GTAGGTCAGTTCTTTGGTCCAAGCCTCTGGTGCAGA...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCCTATTCAGATCCAATTaGGAGGAGGGTGAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCLFRSN*EEGECS
Trigger: GGAGCACTCACCCTCCTCCCAATTGGATCTGAATAG...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGAAATTCAAGGCCGGTaGGTGTGTGGCAGAACCAGA +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKEIQGR*VCGRTR
Trigger: TCTGGTTCTGCCACACACCCACCGGCCTTGAATTTC...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGGCAGTCATGCACAGCTaGCGACCAGCCAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMAVMHS*RPAKGI
Trigger: AATGCCTTTGGCTGGTCGCCAGCTGTGCATGACTGC...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCGAGTTCACTGCACCCTaGACCCCTGTTGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCEFTAP*TPVEVG
Trigger: TCCTACCTCAACAGGGGTCCAGGGTGCAGTGAACTC...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGATACAGACCTCTTCAGTaGGGAGCTGTCTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGYRPLQ*GAVCLP
Trigger: AGGCAAGCAGACAGCTCCCCACTGAAGAGGTCTGTA...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGAGCTGTTCCGGTCACTaGCTTCTTCCTGTTTATGTG +
Preference number: 4 (lower is better)
Translates to: MGIDITVWVALYSRSLTLSCSGH*LLPVYV
Trigger: CACATAAACAGGAAGAAGCCAGTGACCGGAACAGCT...CAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGGCACATCCTCATGGATaGCTGCTGCCCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWAHPHG*LLPFFL
Trigger: AAGAAAGAAGGGCAGCAGTCATCCATGAGGATGTGC...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGGTAGCCAATCACACTaGTACATCTTGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQGSQSH*YILDPQ
Trigger: TTGTGGATCCAAGATGTATCAGTGTGATTGGCTACC...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR TCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACATCCTGCTGCAGAGGCTaGGCTCATCATCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTSCCRG*AHHLLL
Trigger: GAGAAGAAGATGATGAGCTCAGCCTCTGCAGCAGGA...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCTATCTGTGGAAGAAGAGGACTaGATATCATTCACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KVFHGAHVRRPGRPTLLSVEEED*ISFTPG
Trigger: GCCTGGAGTGAATGATATTCAGTCCTCTTCTTCCAC...AGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGAATCCCAAAGGGAGATaGCTGAGTCTTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKNPKGR*LSLAGL
Trigger: CAGTCCAGCAAGACTCAGTCATCTCCCTTTGGGATT...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGAATCCCAAAGGGAGATaGCTGAGTCTTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPNPKGR*LSLAGL
Trigger: CAGTCCAGCAAGACTCAGTCATCTCCCTTTGGGATT...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGACTGAGATTGTTAGATaGAGCAAGCCGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKTEIVR*SKPSCS
Trigger: GGAGCAGGACGGCTTGCTTCATCTAACAATCTCAGT...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGAGATGCTTCAGTTCCTaGTCTGTGAGGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKRCFSS*SVRKEG
Trigger: GCCTTCCTTCCTCACAGAGCAGGAACTGAAGCATCT...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCCCTGTTCATACAGTGTaGTCCCAAACCACTCTGACT +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCPVHTV*SQTTLT
Trigger: AGTCAGAGTGGTTTGGGAGCACACTGTATGAACAGG...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTTTGAGTTTTCTGAGGTaGACAGTTGCTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HGHRHHSMGGTVQQEPHSLSFLR*TVALSA
Trigger: AGCTGAGAGAGCAACTGTGCACCTCAGAAAACTCAA...AGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp AAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCTATCTATCCTCATGGATGACTaGTGCCCTTCTTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: KVFHGAHVRRPGRPTLLSILMDD*CPSFLT
Trigger: GGTCAAGAAAGAAGGGCAGCAGTCATCCATGAGGAT...AGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCTGGAGTCTCCCAATTaGCACGAGGCAATATTTACT +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPLESPN*HEAIFT
Trigger: AGTAAATATTGCCTCGTGGCAATTGGGAGACTCCAG...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CTATCTACATCTGTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTTCCCATTCATGTCCATaGATACAGGAGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LSTSVKKGQASDLKACCPSHSCP*IQESWS
Trigger: TGACCAGCTCTCCTGTATGCATGGACATGAATGGGA...AGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGATGTAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGATTCAGCTTAACCACCTaGTGGAAGCTCTCACGCAGA +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGFSLTT*WKLSRR
Trigger: TCTGCGTGAGAGCTTCCAGCAGGTGGTTAAGCTGAA...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGATTCCTGGGAGAAGATTaGATCCGCCTTTTCCACGGA +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGFLGED*IRLFHG
Trigger: TCCGTGGAAAAGGCGGATGCAATCTTCTCCCAGGAA...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCGATGCACTAATTCCTaGAAACATTTCAGCAAACCG +
Preference number: 4 (lower is better)
Translates to: KARDTYAWKCACTTVWCLRCTNS*KHFSKP
Trigger: CGGTTTGCTGAAATGTTTGCAGGAATTAGTGCATCG...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CTATCTACATCTGTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTAAAACGGTGGAAACATaGCCAGGTCGGCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LSTSVKKGQASDLKACCPKTVET*PGRQSL
Trigger: AAGACTTTGCCGACCTGGGCATGTTTCCACCGTTTT...AGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGATGTAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCTATCTGGCAAGGATGAGACATaGTTATGTGGGATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: KVFHGAHVRRPGRPTLLSGKDET*LCGIRN
Trigger: GTTCCTGATCCCACATAAGCATGTCTCATCCTTGCC...AGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTGTGCCTCCCAGAGCTaGTGTTCCTCCAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSCASQS*CSSSRA
Trigger: AGCCCGACTGGAGGAACAGCAGCTCTGGGAGGCACA...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGGGAGTGAACACTGCATaGATCTACAGTGGAGACCCA +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLGVNTA*IYSGDP
Trigger: TGGGTCTCCACTGTAGATGCATGCAGTGTTCACTCC...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGGTTGCATCCCCTCAGTaGCCAGCACAGCTCCGGATA +
Preference number: 4 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITVASPQ*PAQLRI
Trigger: TATCCGGAGCTGTGCTGGGCACTGAGGGGATGCAAC...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTCTGCATCTGTGTCCTTaGTGCCGGCCCGGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPLHLCP*CRPGLS
Trigger: TGACAACCCGGGCCGGCAGCAAGGACACAGATGCAG...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGCTACGCTTGGAAATGTaGCTGCACCACTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMLRLEM*LHHCVV
Trigger: CACCACACAGTGGTGCAGGCACATTTCCAAGCGTAG...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTCTGTTTAGAGGAAGGTaGTCCAAAGGAGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: HGHRHHSMGGTVQQEPHSLFRGR*SKGAFP
Trigger: TGGAAATGCTCCTTTGGACCACCTTCCTCTAAACAG...AGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp CATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTTGGACCACAGCATATTaGGCTTCTCCTTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: HGHRHHSMGGTVQQEPHSWTTAY*ASPSFT
Trigger: TGTGAAAGAAGGAGAAGCCCAATATGCTGTGGTCCA...AGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTTGGACCACAGCATATTaGGCTTCTCCTTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPWTTAY*ASPSFT
Trigger: TGTGAAAGAAGGAGAAGCCCAATATGCTGTGGTCCA...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGATGTATCCTGTACAGTaGACCACAGCATATTGGGCT +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQMYPVQ*TTAYWA
Trigger: AGCCCAATATGCTGTGGTCCACTGTACAGGATACAT...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGATATGGTCATTCCTGCTaGTGGCCAGGCCTTGATGTA +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGYGHSC*WPGLDV
Trigger: TACATCAAGGCCTGGCCACCAGCAGGAATGACCATA...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTATGGTCATTCCTGCTaGTGGCCAGGCCTTGATGTA +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPYGHSC*WPGLDV
Trigger: TACATCAAGGCCTGGCCACCAGCAGGAATGACCATA...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTGACGGAGGGATAAGAACTCTGTaGGCACCGACATCCCATTCA +
Preference number: 4 (lower is better)
Translates to: CSGHWLLPVYVVGQNRDGGIRTL*APTSHS
Trigger: TGAATGGGATGTCGGTGCCCACAGAGTTCTTATCCC...TCCGTCACGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGATGACCGACAGGACTTaGCCTTTCAGCTTAACCACC +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWMTDRT*PFSLTT
Trigger: GGTGGTTAAGCTGAAAGGCCAAGTCCTGTCGGTCAT...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCTTGGGGACGGGGACCTaGGATAAGTCATACGATGAC +
Preference number: 4 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETLGTGT*DKSYDD
Trigger: GTCATCGTATGACTTATCCCAGGTCCCCGTCCCCAA...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCGAGGATCTCTTTCCTaGGAGAAGATTGCATCCGCC +
Preference number: 4 (lower is better)
Translates to: GASLSCPRLQMVKEKVNVRGSLS*EKIASA
Trigger: GGCGGATGCAATCTTCTCCCAGGAAAGAGATCCTCG...GACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGTCCTGTTGGCAAGACTaGAGTAGGCATTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKSCWQD*SRHSHL
Trigger: CAAGTGGGAATGCCTACTCCAGTCTTGCCAACAGGA...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACAACCCTGGAGTCCTGTTaGCAAGACTGGAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTTLESC*QDWSRH
Trigger: ATGCCTACTCCAGTCTTGCCAACAGGACTCCAGGGT...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACATTGGATCTCCTGGCATaGGCAGCATGTCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTLDLLA*AACPGT
Trigger: TGTTCCAGGACATGCTGCCCATGCCAGGAGATCCAA...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCATGGGCCTCATTCACATaGGCATCGACATCACAGTAT +
Preference number: 4 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAWASFT*ASTSQY
Trigger: ATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGCTCTCTACATACTCTaGATTCTATACAATCACGCT +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWALYIL*ILYNHA
Trigger: AGCGTGATTGTATAGAATCCAGAGTATGTAGAGAGC...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGTCTGCACCAGAGGCTTaGACCAAAGAACTGACCTAC +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWSAPEA*TKELTY
Trigger: GTAGGTCAGTTCTTTGGTCCAAGCCTCTGGTGCAGA...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGAGGCCGGTGGGTGTGTaGCAGAACCAGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITRPVGV*QNQNWN
Trigger: GTTCCAGTTCTGGTTCTGCCACACACCCACCGGCCT...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCGAAATTCAAGGCCGGTaGGTGTGTGGCAGAACCAGA +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCEIQGR*VCGRTR
Trigger: TCTGGTTCTGCCACACACCCACCGGCCTTGAATTTC...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGCTGAAAACAGGGGGATaGATTCATAAACTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NPALSPSPVREVSAGHGLLKTGG*IHKLSS
Trigger: TGAGGAGAGTTTATGAATCCATCCCCCTGTTTTCAG...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGGCTGGGGTTTAATGTaGAGCTTTCAATGGATCACA +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQGWGLM*SFQWIT
Trigger: TGTGATCCATTGAAAGCTCCACATTAAACCCCAGCC...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGTGCATGCATCTACAGTaGAGACCCAATCACCATTAC +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQCMHLQ*RPNHHY
Trigger: GTAATGGTGATTGGGTCTCCACTGTAGATGCATGCA...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCGAGAAAGGCCCATTCTaGGGCTGGCCCTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSEKGPF*GWPWED
Trigger: ATCCTCCCAGGGCCAGCCCCAGAATGGGCCTTTCTC...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGCATGTGTGGCTAATCTaGAGAACATGTAGTCACATT +
Preference number: 4 (lower is better)
Translates to: ASRARVGLIHMGIDITVWHVWLI*RTCSHI
Trigger: AATGTGACTACATGTTCTCCAGATTAGCCACACATG...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTACATGTGTGGCTAATCTaGAGAACATGTAGTCACATT +
Preference number: 4 (lower is better)
Translates to: RASRARVGLIHMGIDITVHVWLI*RTCSHI
Trigger: AATGTGACTACATGTTCTCCAGATTAGCCACACATG...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCAGCTGTTCCGGTCACTaGCTTCTTCCTGTTTATGTG +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCSCSGH*LLPVYV
Trigger: CACATAAACAGGAAGAAGCCAGTGACCGGAACAGCT...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGCATGGCTCCTTAGTATaGGGTGTTTGGTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWHGSLV*GVWWGM
Trigger: CATTCCCCACCAAACACCCCATACTAAGGAGCCATG...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGTCCAGGTGGCTCATaGCTCCTTAGTATGGGGTGT +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMCPGGS*LLSMGC
Trigger: ACACCCCATACTAAGGAGCCATGAGCCACCTGGACA...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR CAA 72 bp CCGGTGGTGCTGAGCTTGGGGACAGGGCCACACATTTaGGCTCTCTACATACTCTGGATTCTATACAATCAC +
Preference number: 4 (lower is better)
Translates to: PVVLSLGTGPHI*ALYILWILYNH
Trigger: GTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCCCCAAGCTCAGCACCACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 72 bp CTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTaGCAAACCAGGATAATTAAATCCTCTGGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LQGWAVLAWEAL*QTRIIKSSGAL
Trigger: TAAAGCCCCAGAGGATTTAATTATCCTGGTTTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 72 bp ACAGACCCTGGCCTGTTGTTGACCATAACACTAGCTTaGGCCACAAAAGCCAGGGACACCTACGCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: TDPGLLLTITLA*ATKARDTYAWK
Trigger: TTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTCAACAACAGGCCAGGGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGAGATCCAGGTATGTCTaGAGCCATTTCCGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMRSRYV*SHFRRV
Trigger: AACCCTCCGGAAATGGCTTCAGACATACCTGGATCT...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000622346.4
CDS-3UTR TCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGGGCCAAGGCCATTCCTaGACCTTTTCCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITGQGHS*TFSSWW
Trigger: CCACCATGAGGAAAAGGTTCAGGAATGGCCTTGGCC...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATTCACGCAGATGGCTTTaGTCCTCAGGGTGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNSRRWL*SSGWQN
Trigger: ATTCTGCCACCCTGAGGATCAAAGCCATCTGCGTGA...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCGAAATCGATACATaGCCGACAGGACTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMCEIDT*PTGLGL
Trigger: AAGGCCAAGTCCTGTCGGTCATGTATCGATTTCGCA...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GCCTCTCCCCTTTCTAATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTTGGTGTTGGTGCAGATaGTGTACTCAATCTCATCAG +
Preference number: 4 (lower is better)
Translates to: ASPLSNPALSPSPVREVSWCWCR*CTQSHQ
Trigger: CTGATGAGATTGAGTACATCATCTGCACCAACACCA...AGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCTGGTGTTGGTGCAGATaGTGTACTCAATCTCATCAG +
Preference number: 4 (lower is better)
Translates to: TLALATKARDTYAWKCACWCWCR*CTQSHQ
Trigger: CTGATGAGATTGAGTACATCATCTGCACCAACACCA...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCTTCACTCCAGGCACATaGACCACTGAAGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCFTPGT*TTEELK
Trigger: CTTCAGCTCTTCAGTGGTTCATGTGCCTGGAGTGAA...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGACTCTGGGCATTGGCTaGACTTTCATGGGTATAAAT +
Preference number: 4 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQTLGIG*TFMGIN
Trigger: ATTTATACCCATGAAAGTTCAGCCAATGCCCAGAGT...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTACTCTGGGCATTGGCTaGACTTTCATGGGTATAAAT +
Preference number: 4 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPTLGIG*TFMGIN
Trigger: ATTTATACCCATGAAAGTTCAGCCAATGCCCAGAGT...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GAAGAAAGAGAAATGGTTAAGTACTTAAACTGTCCACTGACACCTGCTTATGAAACAGACCAGCGGAGCTaGGGGGCAGGCGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EEREMVKYLNCPLTPAYETDQRS*GAGASV
Trigger: CACAGAGGCGCCTGCCCCTCAGCTCCGCTGGTCTGT...TTCATAAGCAGGTGTCAGTGGACAGTTTAAGTACTTAACCATTTCTCTTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTTCATGGTGCCCATGTaGGAAGGCCTGGGCGTCCTA +
Preference number: 4 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSFMVPM*EGLGVL
Trigger: TAGGACGCCCAGGCCTTCTCACATGGGCACCATGAA...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGAGGACACTTCTATTCTaGCTTGTTATTCCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: NPALSPSPVREVSAGHGLRTLLF*LVIPRA
Trigger: AGCTCTAGGAATAACAAGTCAGAATAGAAGTGTCCT...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTGTGTTTGGTGGGGAATaGCCCCGGCAGGTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPVFGGE*PRQVRR
Trigger: TCTCCTAACCTGCCGGGGTCATTCCCCACCAAACAC...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGAGATGCTTCAGTTCCTaGTCTGTGAGGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMRCFSS*SVRKEG
Trigger: GCCTTCCTTCCTCACAGAGCAGGAACTGAAGCATCT...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTCCACGTCATCAGGATaGACCTGTTCATACAGTGTG +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPSTSSG*TCSYSV
Trigger: CACACTGTATGAACAGGTGCATCCTGATGACGTGGA...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCCTCATGGATGACTGCTaGCCTTCTTTCTTGACCGTC +
Preference number: 4 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETLMDDC*PSFLTV
Trigger: GACGGTCAAGAAAGAAGGGCAGCAGTCATCCATGAG...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCTCATGGATGACTGCTaGCCTTCTTTCTTGACCGTC +
Preference number: 4 (lower is better)
Translates to: GASLSCPRLQMVKEKVNVLMDDC*PSFLTV
Trigger: GACGGTCAAGAAAGAAGGGCAGCAGTCATCCATGAG...GACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGCGAGGCAATATTTACTaGCTTGTCCCACATCAGCGT +
Preference number: 4 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWRGNIY*LVPHQR
Trigger: ACGCTGATGTGGGACAAGGCAGTAAATATTGCCTCG...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp ATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCCTGGAGTCTCCCAATTaGCACGAGGCAATATTTACT +
Preference number: 4 (lower is better)
Translates to: IHMGIDITVWVALYSRSLLESPN*HEAIFT
Trigger: AGTAAATATTGCCTCGTGGCAATTGGGAGACTCCAG...GAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCATTCCATCGGAGTTATaGCGGGATAAGAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCIPSEL*RDKNSV
Trigger: CACAGAGTTCTTATCCCGGCATAACTCCGATGGAAT...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGCACTTCCAATTCTaGCTGCTGTTGCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKVHFQF*LLLLKL
Trigger: CAACTTCAGCAACAGCAGGCAGAATTGGAAGTGCAC...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGGTGCACTTCCAATTCTaGCTGCTGTTGCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPVHFQF*LLLLKL
Trigger: CAACTTCAGCAACAGCAGGCAGAATTGGAAGTGCAC...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGCGATGCACTAATTCCTaGAAACATTTCAGCAAACCG +
Preference number: 4 (lower is better)
Translates to: ECSRAILGHPVAITDPVLRCTNS*KHFSKP
Trigger: CGGTTTGCTGAAATGTTTGCAGGAATTAGTGCATCG...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGCGATGCACTAATTCCTaGAAACATTTCAGCAAACCG +
Preference number: 4 (lower is better)
Translates to: GPHSHGHRHHSMGGTVQQRCTNS*KHFSKP
Trigger: CGGTTTGCTGAAATGTTTGCAGGAATTAGTGCATCG...CTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTGAGATGACTGAGTCTTaGTGGACTGAGATGGGATTT +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPEMTES*WTEMGF
Trigger: AAATCCCATCTCAGTCCAGCAAGACTCAGTCATCTC...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR GCA 90 bp ACACATCCATTAGGACAGCAAGTCCATGTCACACTGCACAAATTACATATGTCCTGCTGCTCACCGCTCTaGTGGCCATGGTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: THPLGQQVHVTLHKLHMSCCSPL*WPWCWL
Trigger: AAGCCAGCACCATGGCCAGCAGAGCGGTGAGCAGCA...GGACATATGTAATTTGTGCAGTGTGACATGGACTTGCTGTCCTAATGGATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ACACATCCATTAGGACAGCAAGTCCATGTCACACTGCACAAATTACATATGTCCCCACGGCACAGTGGATaGACAGACAGACCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: THPLGQQVHVTLHKLHMSPRHSG*TDRPAE
Trigger: CTCCGCTGGTCTGTCTGTGCATCCACTGTGCCGTGG...GGACATATGTAATTTGTGCAGTGTGACATGGACTTGCTGTCCTAATGGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGGAAGAAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGGGGAGGAAATGTAGCTaGATTTGTATTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WKKVFHGAHVRRPGRPTLGRKCS*ICILLR
Trigger: TCTCAGCAGAATACAAATGCAGCTACATTTCCTCCC...CAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTTCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533983.5
CDS-3UTR CCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTGATGGTGAGCTTGTCTaGCTTCCGAGCCAGTGCGCT +
Preference number: 4 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPDGELV*LPSQCA
Trigger: AGCGCACTGGCTCGGAAGCCAGACAAGCTCACCATC...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCCATGCACATCCTCATaGATGACTGCTGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GASLSCPRLQMVKEKVNVPCTSS*MTAALL
Trigger: AAGAAGGGCAGCAGTCATCCATGAGGATGTGCATGG...GACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp AAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCTATCTTGGACCACAGCATATTaGGCTTCTCCTTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: KVFHGAHVRRPGRPTLLSWTTAY*ASPSFT
Trigger: TGTGAAAGAAGGAGAAGCCCAATATGCTGTGGTCCA...AGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTATGTATCCTGTACAGTaGACCACAGCATATTGGGCT +
Preference number: 4 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPMYPVQ*TTAYWA
Trigger: AGCCCAATATGCTGTGGTCCACTGTACAGGATACAT...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCATGTATCCTGTACAGTaGACCACAGCATATTGGGCT +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCMYPVQ*TTAYWA
Trigger: AGCCCAATATGCTGTGGTCCACTGTACAGGATACAT...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATAGCTTAACCACCTGCTaGAAGCTCTCACGCAGATGG +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNSLTTC*KLSRRW
Trigger: CCATCTGCGTGAGAGCTTCCAGCAGGTGGTTAAGCT...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCAACATGTTCTGGCCCGTaGAAGAAGAGGACTGAATAT +
Preference number: 4 (lower is better)
Translates to: ASLHSQVPRTNATLLGPATCSGP*KKRTEY
Trigger: ATATTCAGTCCTCTTCTTCCACGGGCCAGAACATGT...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCATTTGGGACATGTTCTaGCCCGTGGAAGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCIWDMF*PVEEED
Trigger: GTCCTCTTCTTCCACGGGCCAGAACATGTCCCAAAT...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACACTTGCTGGACTGAGATaGGATTTGCTGTCCCGGAAA +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTLAGLR*DLLSRK
Trigger: TTTCCGGGACAGCAAATCCCATCTCAGTCCAGCAAG...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGCTTGCTGGACTGAGATaGGATTTGCTGTCCCGGAAA +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMLAGLR*DLLSRK
Trigger: TTTCCGGGACAGCAAATCCCATCTCAGTCCAGCAAG...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCTCCTGTTGGCAAGACTaGAGTAGGCATTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: GASLSCPRLQMVKEKVNVSCWQD*SRHSHL
Trigger: CAAGTGGGAATGCCTACTCCAGTCTTGCCAACAGGA...GACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATACCCTGGAGTCCTGTTaGCAAGACTGGAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNTLESC*QDWSRH
Trigger: ATGCCTACTCCAGTCTTGCCAACAGGACTCCAGGGT...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATCTACTCAGAAAACGGTaGAAACATGCCCAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNLLRKR*KHAQVG
Trigger: GCCGACCTGGGCATGTTTCCACCGTTTTCTGAGTAG...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGGCTGCTTGGTCACTCTaGGCATTGGCTGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMAAWSL*ALAELS
Trigger: TGAAAGTTCAGCCAATGCCCAGAGTGACCAAGCAGC...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGTGCATGCATCTACAGTaGAGACCCAATCACCATTAC +
Preference number: 4 (lower is better)
Translates to: PHSHGHRHHSMGGTVQQECMHLQ*RPNHHY
Trigger: GTAATGGTGATTGGGTCTCCACTGTAGATGCATGCA...CTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGAAGTGCTGCCGGGAGTaGGGAGACCACCATTCATTC +
Preference number: 4 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITKCCRE*GDHHSF
Trigger: GAATGAATGGTGGTCTCCCCACTCCCGGCAGCACTT...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCATGGCTCCTTAGTATaGGGTGTTTGGTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCHGSLV*GVWWGM
Trigger: CATTCCCCACCAAACACCCCATACTAAGGAGCCATG...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
3UTR CAA 72 bp AAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTaGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: KCACTTVWCLLK*PQTPDGQRKGE
Trigger: TTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGTCAGTTCCTGCTCTGTaGGGAAGGAAGGCTTGTACG +
Preference number: 4 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITSVPAL*GRKACT
Trigger: CGTACAAGCCTTCCTTCCTCACAGAGCAGGAACTGA...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGAGATCCAGGTATGTCTaGAGCCATTTCTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLRSRYV*SHFWTS
Trigger: AGAAGTCCAGAAATGGCTTCAGACATACCTGGATCT...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533983.5
CDS-3UTR GCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACACCTGTTCATACAGTGTaGTCCCAAACCACTCTGACT +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTPVHTV*SQTTLT
Trigger: AGTCAGAGTGGTTTGGGAGCACACTGTATGAACAGG...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCTCCACGTCATCAGGATaGACCTGTTCATACAGTGTG +
Preference number: 4 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETSTSSG*TCSYSV
Trigger: CACACTGTATGAACAGGTGCATCCTGATGACGTGGA...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGTTGAGTTTTCTGAGGTaGACAGTTGCTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKLSFLR*TVALSA
Trigger: AGCTGAGAGAGCAACTGTGCACCTCAGAAAACTCAA...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGCTGGAGTCTCCCAATTaGCACGAGGCAATATTTACT +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKLESPN*HEAIFT
Trigger: AGTAAATATTGCCTCGTGGCAATTGGGAGACTCCAG...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCGTGCACTTCCAATTCTaGCTGCTGTTGCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETVHFQF*LLLLKL
Trigger: CAACTTCAGCAACAGCAGGCAGAATTGGAAGTGCAC...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCAATCCATCTCTCTGGTaGACTTCCAATTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCNPSLW*TSNSAC
Trigger: GCAGGCAGAATTGGAAGTGCACCAGAGAGATGGATT...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGGAGATGACTGAGTCTTaGTGGACTGAGATGGGATTT +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLEMTES*WTEMGF
Trigger: AAATCCCATCTCAGTCCAGCAAGACTCAGTCATCTC...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp ACACATCCATTAGGACAGCAAGTCCATGTCACACTGCACAAATTACATATGTCCCAGGCCTGCTGGTGCTaGTTGGTCACTCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: THPLGQQVHVTLHKLHMSQACWC*LVTLGI
Trigger: AATGCCCAGAGTGACCAAGCAGCACCAGCAGGCCTG...GGACATATGTAATTTGTGCAGTGTGACATGGACTTGCTGTCCTAATGGATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATAAAAGCTCTAGAAACTaGAAAGTTGGGGTTAAGTTA +
Preference number: 4 (lower is better)
Translates to: GQAGRGWASFTWASTSQYKSSRN*KVGVKL
Trigger: TAACTTAACCCCAACTTTGCAGTTTCTAGAGCTTTT...ATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCGGTGCCTCCTTAAGTTaGCCCAGACTCCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSGASLS*PRLQMV
Trigger: GACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGCTCTTGAAAATTTACTaGGGCCTTCACCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: MGIDITVWVALYSRSLTLLLKIY*GLHHLH
Trigger: ATGAAGATGGTGAAGGCCCCAGTAAATTTTCAAGAG...CAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATATGACCGACAGGACTTaGCCTTTCAGCTTAACCACC +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNMTDRT*PFSLTT
Trigger: GGTGGTTAAGCTGAAAGGCCAAGTCCTGTCGGTCAT...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCGACAATCCATCTCTCTaGTGCACTTCCAATTCTGCC +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCDNPSL*CTSNSA
Trigger: GGCAGAATTGGAAGTGCACCAGAGAGATGGATTGTC...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGACATGTTCTGGCCCGTaGAAGAAGAGGACTGAATAT +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKTCSGP*KKRTEY
Trigger: ATATTCAGTCCTCTTCTTCCACGGGCCAGAACATGT...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCTGGGCCTCATTCACATaGGCATCGACATCACAGTAT +
Preference number: 4 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETWASFT*ASTSQY
Trigger: ATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACAGGTCACTCTGGGCATTaGCTGAACTTTCATGGGTAT +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTGHSGH*LNFHGY
Trigger: ATACCCATGAAAGTTCAGCCAATGCCCAGAGTGACC...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGCTGCTTGGTCACTCTaGGCATTGGCTGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNAAWSL*ALAELS
Trigger: TGAAAGTTCAGCCAATGCCCAGAGTGACCAAGCAGC...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGGCTCTCTACATACTCTaGATTCTATACAATCACGCT +
Preference number: 4 (lower is better)
Translates to: ECSRAILGHPVAITDPVLALYIL*ILYNHA
Trigger: AGCGTGATTGTATAGAATCCAGAGTATGTAGAGAGC...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCGGAAGGGAAGGAGGCTaGGCCTATTTAGTCATAATG +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCGREGG*AYLVIM
Trigger: CATTATGACTAAATAGGCCCAGCCTCCTTCCCTTCC...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCCTTGGTGAAAACCCCTaGGGCATGTGCGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSLGENP*GMCDSP
Trigger: GGGAGAATCGCACATGCCCCAGGGGTTTTCACCAAG...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CCACTGTGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGTTCATTCCCTGGGACTaGTTTCTTTCTCGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: PLCGASLSCPRLQMVKEKFIPWD*FLSRLK
Trigger: CTTTAGCCGAGAAAGAAACCAGTCCCAGGGAATGAA...CTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACACAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 72 bp AGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTaGAGACCACCAGAGAAATTCAAGGCCGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RQKILESALVLV*RPPEKFKAGGC
Trigger: ACACCCACCGGCCTTGAATTTCTCTGGTGGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGAGATCCAGGTATGTCTaGAGCCATTTCCGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITRSRYV*SHFRRV
Trigger: AACCCTCCGGAAATGGCTTCAGACATACCTGGATCT...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303329.9
CDS-3UTR TCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGGGTAGCCAATCACACTaGTACATCTTGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMGSQSH*YILDPQ
Trigger: TTGTGGATCCAAGATGTATCAGTGTGATTGGCTACC...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGGTGTTGGTGCAGATaGTGTACTCAATCTCATCAG +
Preference number: 4 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMWCWCR*CTQSHQ
Trigger: CTGATGAGATTGAGTACATCATCTGCACCAACACCA...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTGGAAGAAGAGGACTaGATATCATTCACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNVEEED*ISFTPG
Trigger: GCCTGGAGTGAATGATATTCAGTCCTCTTCTTCCAC...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp GCCTCTCCCCTTTCTAATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTTACAATAAATACAACTaGTCCCCTAATGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ASPLSNPALSPSPVREVSYNKYN*SPNVCQ
Trigger: CTGGCAGACATTAGGGGATCAGTTGTATTTATTGTA...AGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCATACTCCAGTTTGTCTTaGAAATCCTTGGTGAAAACC +
Preference number: 4 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAYSSLS*KSLVKT
Trigger: GGTTTTCACCAAGGATTTTCAAGACAAACTGGAGTA...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCTAAGGAAAGCCAGTTaGAAGTCCAGTAGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLLRKAS*KSSSSN
Trigger: GTTTGAACTACTGGACTTTCAACTGGCTTTCCTTAG...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AAAGTGTTTCATGGTGCCCATGTGAGAAGGCCTGGGCGTCCTACCCTGCTATCTAGGACACTTCTATTCTaGCTTGTTATTCCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: KVFHGAHVRRPGRPTLLSRTLLF*LVIPRA
Trigger: AGCTCTAGGAATAACAAGTCAGAATAGAAGTGTCCT...AGATAGCAGGGTAGGACGCCCAGGCCTTCTCACATGGGCACCATGAAACACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCAGGACACTTCTATTCTaGCTTGTTATTCCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCRTLLF*LVIPRA
Trigger: AGCTCTAGGAATAACAAGTCAGAATAGAAGTGTCCT...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGCAGAAATCCATCAGCTaGTTCAAGGATGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: LELFRSLASSCLCGRSEPQKSIS*FKDEML
Trigger: AAGCATCTCATCCTTGAAGCAGCTGATGGATTTCTG...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACATTGAGTTTTCTGAGGTaGACAGTTGCTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTLSFLR*TVALSA
Trigger: AGCTGAGAGAGCAACTGTGCACCTCAGAAAACTCAA...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCATTCCATCGGAGTTATaGCGGGATAAGAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCIPSEL*RDKNSV
Trigger: CACAGAGTTCTTATCCCGGCATAACTCCGATGGAAT...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTGCAGAACGAGGGCTGTaGACTCTGCTTGCCCATTTT +
Preference number: 4 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPAERGL*TLLAHF
Trigger: AAAATGGGCAAGCAGAGTGCACAGCCCTCGTTCTGC...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGGTTGGAGTGAACACTaGATGCATCTACAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNGWSEH*MHLQWR
Trigger: TCTCCACTGTAGATGCATGCAGTGTTCACTCCAACC...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTCAGTGGGGAGCTGTCTaGTTGCCTGACCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPQWGAV*LPDLRK
Trigger: TTTCCTTAGGTCAGGCAAGCAGACAGCTCCCCACTG...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCGTGAAACCTCCATTTTaGCACTTTCAAGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETVKPPF*HFQGQC
Trigger: GCACTGACCTTGAAAGTGGCAAAATGGAGGTTTCAC...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTCTACCTGAAGGACTCTaGGAGGGACACAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPLPEGL*EGHKGF
Trigger: AAAGCCCTTGTGTCCCTCCCAGAGTCCTTCAGGTAG...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACATCCATTAGGACAGCAAGTCCATGTCACACTGCACAAATTACATATGTCCGAGTTCACTGCACCCTaGACCCCTGTTGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: THPLGQQVHVTLHKLHMSEFTAP*TPVEVG
Trigger: TCCTACCTCAACAGGGGTCCAGGGTGCAGTGAACTC...GGACATATGTAATTTGTGCAGTGTGACATGGACTTGCTGTCCTAATGGATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CAATCACGCTGGCCACACATGACAGACACAAGGCACAACACATCCATTAGGACATTCATTCCCTGGGACTaGTTTCTTTCTCGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: QSRWPHMTDTRHNTSIRTFIPWD*FLSRLK
Trigger: CTTTAGCCGAGAAAGAAACCAGTCCCAGGGAATGAA...TGTCCTAATGGATGTGTTGTGCCTTGTGTCTGTCATGTGTGGCCAGCGTGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCGCTTTCATTCATCCATaGATCCTCACCCAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSAFIHP*ILTQGP
Trigger: TGGCCCTTGGGTGAGGATTCATGGATGAATGAAAGC...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GCCTCTCCCCTTTCTAATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTTTCTTATTGACCCCATaGCGGCTTTTACAAATCATA +
Preference number: 4 (lower is better)
Translates to: ASPLSNPALSPSPVREVSFLLTP*RLLQII
Trigger: TATGATTTGTAAAAGCCGTCATGGGGTCAATAAGAA...AGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAGGGGAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGTACTCCAGTTTGTCTTaGAAATCCTTGGTGAAAACC +
Preference number: 4 (lower is better)
Translates to: NTSFGHKSQGHLRLEMCLYSSLS*KSLVKT
Trigger: GGTTTTCACCAAGGATTTTCAAGACAAACTGGAGTA...CAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCAGAAATCCATCAGCTaGTTCAAGGATGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCQKSIS*FKDEML
Trigger: AAGCATCTCATCCTTGAAGCAGCTGATGGATTTCTG...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATCTGGAGTCTCCCAATTaGCACGAGGCAATATTTACT +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNLESPN*HEAIFT
Trigger: AGTAAATATTGCCTCGTGGCAATTGGGAGACTCCAG...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCAATCATAAGCAAAAACTaGAGTCAGACTCTACTCAGA +
Preference number: 4 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAIISKN*SQTLLR
Trigger: TCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTCTATTCAGATCCAATTaGGAGGAGGGTGAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPLFRSN*EEGECS
Trigger: GGAGCACTCACCCTCCTCCCAATTGGATCTGAATAG...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGAAGGCTCAGGTGGCCTaGAAGAAAGTGTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITKAQVA*KKVFHG
Trigger: ACCATGAAACACTTTCTTCCAGGCCACCTGAGCCTT...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGAAAACAGGGGGATaGATTCATAAACTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCLKTGG*IHKLSS
Trigger: TGAGGAGAGTTTATGAATCCATCCCCCTGTTTTCAG...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTGAATGTGGCTATTTGTaGTGGCTGTCACTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPECGYL*WLSLPE
Trigger: TTCAGGGAGTGACAGCCATCACAAATAGCCACATTC...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTTCCACGTCATCAGGATaGACCTGTTCATACAGTGTG +
Preference number: 4 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPSTSSG*TCSYSV
Trigger: CACACTGTATGAACAGGTGCATCCTGATGACGTGGA...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCATCCTCATGGATGACTaGTGCCCTTCTTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSILMDD*CPSFLT
Trigger: GGTCAAGAAAGAAGGGCAGCAGTCATCCATGAGGAT...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTCGAGGCAATATTTACTaGCTTGTCCCACATCAGCGT +
Preference number: 4 (lower is better)
Translates to: IISKNCSQTLLRFPAYAPRGNIY*LVPHQR
Trigger: ACGCTGATGTGGGACAAGGCAGTAAATATTGCCTCG...AGGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCTCCCATTCATGTCCATaGATACAGGAGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSSHSCP*IQESWS
Trigger: TGACCAGCTCTCCTGTATGCATGGACATGAATGGGA...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCAAAAGCTCTAGAAACTaGAAAGTTGGGGTTAAGTTA +
Preference number: 4 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCKSSRN*KVGVKL
Trigger: TAACTTAACCCCAACTTTGCAGTTTCTAGAGCTTTT...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCTCTTGAAAATTTACTaGGGCCTTCACCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: GASLSCPRLQMVKEKVNVLLKIY*GLHHLH
Trigger: ATGAAGATGGTGAAGGCCCCAGTAAATTTTCAAGAG...GACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GAAGAAAGAGAAATGGTTAAGTACTTAAACTGTCCACTGACACCTGCTTATGAATGTACGCGCCATCGGTaGACTTGTTCCCTGTACCCC +
Preference number: 4 (lower is better)
Translates to: EEREMVKYLNCPLTPAYECTRHR*TCSLYP
Trigger: GGGGTACAGGGAACAAGTCCACCGATGGCGCGTACA...TTCATAAGCAGGTGTCAGTGGACAGTTTAAGTACTTAACCATTTCTCTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp GAAGAAAGAGAAATGGTTAAGTACTTAAACTGTCCACTGACACCTGCTTATGAAAAGGCTGGGCGGTACTaGCATGGGAGGCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: EEREMVKYLNCPLTPAYEKAGRY*HGRLFC
Trigger: GCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTT...TTCATAAGCAGGTGTCAGTGGACAGTTTAAGTACTTAACCATTTCTCTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GGACAGGGCCACACATTTTGGCTCTCTACATACTCTGGATTCTATACAATCACGCTAAGGAAAGCCAGTTaGAAGTCCAGTAGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GQGHTFWLSTYSGFYTITLRKAS*KSSSSN
Trigger: GTTTGAACTACTGGACTTTCAACTGGCTTTCCTTAG...CGTGATTGTATAGAATCCAGAGTATGTAGAGAGCCAAAATGTGTGGCCCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCAAAACCTTGGTCACCTaGTCCTCCTACACTTTTCAG +
Preference number: 4 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSKTLVT*SSYTFQ
Trigger: CTGAAAAGTGTAGGAGGATCAGGTGACCAAGGTTTT...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533983.5
CDS-3UTR CCA 90 bp TGTGGTGCCTCCTTAAGTTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATCTCTTGAAAATTTACTaGGGCCTTCACCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: CGASLSCPRLQMVKEKVNLLKIY*GLHHLH
Trigger: ATGAAGATGGTGAAGGCCCCAGTAAATTTTCAAGAG...ATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CCA 90 bp ACACATCCATTAGGACAGCAAGTCCATGTCACACTGCACAAATTACATATGTCCGACAATCCATCTCTCTaGTGCACTTCCAATTCTGCC +
Preference number: 4 (lower is better)
Translates to: THPLGQQVHVTLHKLHMSDNPSL*CTSNSA
Trigger: GGCAGAATTGGAAGTGCACCAGAGAGATGGATTGTC...GGACATATGTAATTTGTGCAGTGTGACATGGACTTGCTGTCCTAATGGATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp GAAGAAAGAGAAATGGTTAAGTACTTAAACTGTCCACTGACACCTGCTTATGAAATTATGCCCAAGGCCTaGGGCAAGCTCAAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: EEREMVKYLNCPLTPAYEIMPKA*GKLKPA
Trigger: AGCAGGCTTGAGCTTGCCCCAGGCCTTGGGCATAAT...TTCATAAGCAGGTGTCAGTGGACAGTTTAAGTACTTAACCATTTCTCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp GAAGAAAGAGAAATGGTTAAGTACTTAAACTGTCCACTGACACCTGCTTATGAACCAGTGGGGCAAGGATaGGACATGCTTATGTGGGAT +
Preference number: 4 (lower is better)
Translates to: EEREMVKYLNCPLTPAYEPVGQG*DMLMWD
Trigger: ATCCCACATAAGCATGTCTCATCCTTGCCCCACTGG...TTCATAAGCAGGTGTCAGTGGACAGTTTAAGTACTTAACCATTTCTCTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CCA 90 bp ACACATCCATTAGGACAGCAAGTCCATGTCACACTGCACAAATTACATATGTCCCTGTTTAGAGGAAGGTaGTCCAAAGGAGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: THPLGQQVHVTLHKLHMSLFRGR*SKGAFP
Trigger: TGGAAATGCTCCTTTGGACCACCTTCCTCTAAACAG...GGACATATGTAATTTGTGCAGTGTGACATGGACTTGCTGTCCTAATGGATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp ACACATCCATTAGGACAGCAAGTCCATGTCACACTGCACAAATTACATATGTCCCTCTTGTTCTTGTCTTaGGACCACCAGAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: THPLGQQVHVTLHKLHMSLLFLS*DHQRNS
Trigger: TGAATTTCTCTGGTGGTCTCAAGACAAGAACAAGAG...GGACATATGTAATTTGTGCAGTGTGACATGGACTTGCTGTCCTAATGGATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp ACACATCCATTAGGACAGCAAGTCCATGTCACACTGCACAAATTACATATGTCCTGCATCCATCAGAAGTaGAATCAAGAAGAAATCTGC +
Preference number: 4 (lower is better)
Translates to: THPLGQQVHVTLHKLHMSCIHQK*NQEEIC
Trigger: GCAGATTTCTTCTTGATTTCACTTCTGATGGATGCA...GGACATATGTAATTTGTGCAGTGTGACATGGACTTGCTGTCCTAATGGATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR TCA 90 bp AATCATAAGCAAAAACTGCAGTCAGACTCTACTCAGATTTCCCGCCTATGCTCCGCATTTGTATTCTGCTaGGAAAATGTCATCACAGAT +
Preference number: 4 (lower is better)
Translates to: NHKQKLQSDSTQISRLCSAFVFC*ENVITD
Trigger: ATCTGTGATGACATTTTCTCAGCAGAATACAAATGC...GGAGCATAGGCGGGAAATCTGAGTAGAGTCTGACTGCAGTTTTTGCTTATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533983.5
CDS-3UTR GCA 90 bp GAAGAAAGAGAAATGGTTAAGTACTTAAACTGTCCACTGACACCTGCTTATGAAATCCTCATGGATGACTaGTGCCCTTCTTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: EEREMVKYLNCPLTPAYEILMDD*CPSFLT
Trigger: GGTCAAGAAAGAAGGGCAGCAGTCATCCATGAGGAT...TTCATAAGCAGGTGTCAGTGGACAGTTTAAGTACTTAACCATTTCTCTTTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR TCA 90 bp ACACATCCATTAGGACAGCAAGTCCATGTCACACTGCACAAATTACATATGTCCTTCTTATTGACCCCATaGCGGCTTTTACAAATCATA +
Preference number: 4 (lower is better)
Translates to: THPLGQQVHVTLHKLHMSFLLTP*RLLQII
Trigger: TATGATTTGTAAAAGCCGTCATGGGGTCAATAAGAA...GGACATATGTAATTTGTGCAGTGTGACATGGACTTGCTGTCCTAATGGATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR GCA 90 bp GAAGAAAGAGAAATGGTTAAGTACTTAAACTGTCCACTGACACCTGCTTATGAAGTGAAACCTCCATTTTaGCACTTTCAAGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: EEREMVKYLNCPLTPAYEVKPPF*HFQGQC
Trigger: GCACTGACCTTGAAAGTGGCAAAATGGAGGTTTCAC...TTCATAAGCAGGTGTCAGTGGACAGTTTAAGTACTTAACCATTTCTCTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR GCA 90 bp GAAGAAAGAGAAATGGTTAAGTACTTAAACTGTCCACTGACACCTGCTTATGAAAAGTCCATGTCACACTaGACAAATTACATATGTCCC +
Preference number: 4 (lower is better)
Translates to: EEREMVKYLNCPLTPAYEKSMSH*TNYICP
Trigger: GGGACATATGTAATTTGTGCAGTGTGACATGGACTT...TTCATAAGCAGGTGTCAGTGGACAGTTTAAGTACTTAACCATTTCTCTTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
3UTR CAA 72 bp CACTCTGGGCATTGGCTGAACTTTCATGGGTATAAATaGTCTATCAAGAGATTATTCACAACCAAACTTAAG +
Preference number: 4 (lower is better)
Translates to: HSGHWLNFHGYK*SIKRLFTTKLK
Trigger: CTTAAGTTTGGTTGTGAATAATCTCTTGATAGACAATTTATACCCATGAAAGTTCAGCCAATGCCCAGAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS GCA 90 bp CCGGGCTGCTGGTGGGAGTGCTGCTCACCGCTCTGCTGGCCATGGTaGTGGCTTTGCCACTGCGACCAGACTTCCGAGGGCCGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: PGCWWECCSPLCWPW*WLCHCDQTSEGRPW
Trigger: CCAAGGGCGGCCCTCGGAAGTCTGGTCGCAGTGGCAAAGCCAGCACCATGGCCAGCAGAGCGGTGAGCAGCACTCCCACCAGCAGCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
ENST00000622346.4
CDS CCA 90 bp CATCGAAGTCCATTCCGGAACGCCGCTTTCCTCCACGGGCAGGCATaGCCCCCGCCATCCTCACCTGTCCGGTGGCCGCCATGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: HRSPFRNAAFLHGQA*PPPSSPVRWPPWGQ
Trigger: TTGCCCCCATGGCGGCCACCGGACAGGTGAGGATGGCGGGGGCCATGCCTGCCCGTGGAGGAAAGCGGCGTTCCGGAATGGACTTCGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000529181.1
ENST00000533983.5
ENST00000622346.4
CDS GCA 90 bp TGGTGGGAGTGCTGCTCACCGCTCTGCTGGCCATGGTGCTGGCTTTaGCACTGCGACCAGACTTCCGAGGGCCGCCCTTGGAACTGCCCG +
Preference number: 5 (lower is better)
Translates to: WWECCSPLCWPWCWL*HCDQTSEGRPWNCP
Trigger: CGGGCAGTTCCAAGGGCGGCCCTCGGAAGTCTGGTCGCAGTGGCAAAGCCAGCACCATGGCCAGCAGAGCGGTGAGCAGCACTCCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
ENST00000622346.4
CDS CCA 90 bp GGGCAGGCATGGCCCCCGCCATCCTCACCTGTCCGGTGGCCGCCATaGGGGCAACGGGCAACGTCACAGATCCAGGTATGTCTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: GQAWPPPSSPVRWPP*GQRATSQIQVCLKP
Trigger: TGGCTTCAGACATACCTGGATCTGTGACGTTGCCCGTTGCCCCCATGGCGGCCACCGGACAGGTGAGGATGGCGGGGGCCATGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000529181.1
ENST00000533983.5
ENST00000622346.4
CDS CCA 90 bp GGCTGCTGGTGGGAGTGCTGCTCACCGCTCTGCTGGCCATGGTGCTaGCTTTGCCACTGCGACCAGACTTCCGAGGGCCGCCCTTGGAAC +
Preference number: 5 (lower is better)
Translates to: GCWWECCSPLCWPWC*LCHCDQTSEGRPWN
Trigger: GTTCCAAGGGCGGCCCTCGGAAGTCTGGTCGCAGTGGCAAAGCCAGCACCATGGCCAGCAGAGCGGTGAGCAGCACTCCCACCAGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CAA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATGCCATGGTGCTGGCTTaGCCACTGCGACCAGACTTC +
Preference number: 5 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHAMVLA*PLRPDF
Trigger: GAAGTCTGGTCGCAGTGGCAAAGCCAGCACCATGGC...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACGGAGGATGGTGAGCTaGTCTGGCTTCCGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTRRMVS*SGFRAS
Trigger: ACTGGCTCGGAAGCCAGACAAGCTCACCATCCTCCG...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACGTGAGGAAGGAAGGCTaGTACGCGCCATCGGTGGAC +
Preference number: 5 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHVRKEG*YAPSVD
Trigger: GTCCACCGATGGCGCGTACAAGCCTTCCTTCCTCAC...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp GGGGGCCTGCGGCAGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATGCTGGTGGCCAGGCCTaGATGTATCCTGTACAGTGG +
Preference number: 5 (lower is better)
Translates to: GGLRQGKQGEGGPHSHGHAGGQA*MYPVQW
Trigger: CCACTGTACAGGATACATCAAGGCCTGGCCACCAGC...ATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCTGCCGCAGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACGCTGGTGGCCAGGCCTaGATGTATCCTGTACAGTGG +
Preference number: 5 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHAGGQA*MYPVQW
Trigger: CCACTGTACAGGATACATCAAGGCCTGGCCACCAGC...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp GTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGCCGGTGGTGCTGAGCTaGGGGACAGGGCCACACATT +
Preference number: 5 (lower is better)
Translates to: VKKGQASDLKACCPAGSGPVVLS*GTGPHI
Trigger: AATGTGTGGCCCTGTCCCCAAGCTCAGCACCACCGG...CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACATGGTGCCTCCTTAAGTaGCCCCAGACTCCAGATGGT +
Preference number: 5 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTWCLLK*PQTPDG
Trigger: ACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCA...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp CTGAGGGGCAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACCGGAGGATGGTGAGCTaGTCTGGCTTCCGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: LRGRRLCVSVLLGSSWQNRRMVS*SGFRAS
Trigger: ACTGGCTCGGAAGCCAGACAAGCTCACCATCCTCCG...GTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTGCCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTGTGAGGAAGGAAGGCTaGTACGCGCCATCGGTGGAC +
Preference number: 5 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGVRKEG*YAPSVD
Trigger: GTCCACCGATGGCGCGTACAAGCCTTCCTTCCTCAC...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACATGACCGACAGGACTaGGCCTTTCAGCTTAACCAC +
Preference number: 5 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTHDRQD*AFQLNH
Trigger: GTGGTTAAGCTGAAAGGCCAAGTCCTGTCGGTCATG...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp GCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGACACCGGCTGGTAGGTaGGGGACGGGGACCTGGGAT +
Preference number: 5 (lower is better)
Translates to: ASTSQYGWHCTAGASLWPTPAGR*GTGTWD
Trigger: ATCCCAGGTCCCCGTCCCCAACCTACCAGCCGGTGT...CGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACTGGTCACTCTGGGCATaGGCTGAACTTTCATGGGTA +
Preference number: 5 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDWSLWA*AELSWV
Trigger: TACCCATGAAAGTTCAGCCAATGCCCAGAGTGACCA...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAAAGGGTGAGTGCTCCCTaGGGGCTCCTGTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQRVSAP*GLLWEE
Trigger: TTCCTCCCACAGGAGCCCCAAGGGAGCACTCACCCT...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACCTTTCTAATCCAGCTTaGAGCCCGTCTCCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDLSNPA*SPSPVR
Trigger: TCTGACTGGAGACGGGCTCAAAGCTGGATTAGAAAG...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp TGGCCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACGACCCTGGCCTGTTGTaGACCATAACACTAGCTTTG +
Preference number: 5 (lower is better)
Translates to: WPSSRGCRGEWSNDAPGDDPGLL*TITLAL
Trigger: CAAAGCTAGTGTTATGGTCAACAACAGGCCAGGGTC...GTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS CCA 90 bp TGGTGCTGGCTTTGCCACTGCGACCAGACTTCCGAGGGCCGCCCTTaGAACTGCCCGCTACTTTGTCCACTTTCAGCGAACCCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: WCWLCHCDQTSEGRP*NCPLLCPLSANPGV
Trigger: GACTCCAGGGTTCGCTGAAAGTGGACAAAGTAGCGGGCAGTTCCAAGGGCGGCCCTCGGAAGTCTGGTCGCAGTGGCAAAGCCAGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CAA 90 bp ACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCCTTAAGTTGCGCCATTTCCGGAGGGTaGACCGCCGCCGGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: TPTLGNVPAPLCGASLSCAISGG*TAAGVA
Trigger: GGCAACCCCGGCGGCGGTCAACCCTCCGGAAATGGC...GCAACTTAAGGAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000622346.4
CDS-3UTR CAA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACAGATCCGGCCTGTCATaGAGTTTTCTGAGGTGCACA +
Preference number: 5 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHRSGLS*SFLRCT
Trigger: TGTGCACCTCAGAAAACTCAATGACAGGCCGGATCT...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACCCTGGAGTCTCCCAATaGCCACGAGGCAATATTTAC +
Preference number: 5 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHPGVSQ*PRGNIY
Trigger: GTAAATATTGCCTCGTGGCAATTGGGAGACTCCAGG...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACAATCCACTCCCGGTTCTaGGTGCGAAATCGATACATG +
Preference number: 5 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTIHSRF*VRNRYM
Trigger: CATGTATCGATTTCGCACCAAGAACCGGGAGTGGAT...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGTTCCGAGGGCCGCCCTaGGAACTGCCCGCTACTTTG +
Preference number: 5 (lower is better)
Translates to: SRARVGLIHMGIDITVWVFRGPP*ELPATL
Trigger: CAAAGTAGCGGGCAGTTCCAAGGGCGGCCCTCGGAA...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp GCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGTGCCAGTCCCCTGGGTaGGATCTCCTGGCATGGGCA +
Preference number: 5 (lower is better)
Translates to: ASRARVGLIHMGIDITVWCQSPG*DLLAWA
Trigger: TGCCCATGCCAGGAGATCCAACCCAGGGGACTGGCA...CCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp GCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGAGGGTGAGTGCTCCCTaGGGGCTCCTGTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: ASTSQYGWHCTAGASLWPRVSAP*GLLWEE
Trigger: TTCCTCCCACAGGAGCCCCAAGGGAGCACTCACCCT...CGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp GTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGCAGGCTCTGGGCAGGGACACCTACGCTaGGAAATGTGCCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: VKKGQASDLKACCPAGSGQGHLR*EMCLHH
Trigger: GTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTG...CCCAGAGCCTGCAGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS GCA 90 bp TGGCTTTGCCACTGCGACCAGACTTCCGAGGGCCGCCCTTGGAACTaGCCGCTACTTTGTCCACTTTCAGCGAACCCTGGAGTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: WLCHCDQTSEGRPWN*PLLCPLSANPGVLL
Trigger: CAACAGGACTCCAGGGTTCGCTGAAAGTGGACAAAGTAGCGGGCAGTTCCAAGGGCGGCCCTCGGAAGTCTGGTCGCAGTGGCAAAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
ENST00000622346.4
CDS CCA 90 bp AGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATaGGTGGCACTGTACAGCAGGAGCCTCACTCTGGCCGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: RARVGLIHMGIDITV*VALYSRSLTLAAAT
Trigger: AGTAGCTGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGGCCATTTCCGGAGGGTaGACCGCCGCCGGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWAISGG*TAAGVA
Trigger: GGCAACCCCGGCGGCGGTCAACCCTCCGGAAATGGC...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000622346.4
CDS-3UTR CAA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTAGCGCCATCGGTGGACTaGTTCCCTGTACCCCTCATG +
Preference number: 5 (lower is better)
Translates to: RASRARVGLIHMGIDITVAPSVD*FPVPLM
Trigger: CATGAGGGGTACAGGGAACAAGTCCACCGATGGCGC...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp CCGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACAATTCTGCCTGCTGTaGCTGAAGTTGCTTGACGTT +
Preference number: 5 (lower is better)
Translates to: PSSRGCRGEWSNDAPGDTQFCLL*LKLLDV
Trigger: AACGTCAAGCAACTTCAGCAACAGCAGGCAGAATTG...TGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTGCAGGGATGCACGGGTaGTTTCTGAGCAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGAGMHG*FLSKQH
Trigger: ATGCTGCTTGCTCAGAAACAACCCGTGCATCCCTGC...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp CTGAGGGGCAGGCGCCTCTGTGTCTCTGTGCTTCTTGGCTCCAGCTGGCAGAACTGGTGCCTCCTTAAGTaGCCCCAGACTCCAGATGGT +
Preference number: 5 (lower is better)
Translates to: LRGRRLCVSVLLGSSWQNWCLLK*PQTPDG
Trigger: ACCATCTGGAGTCTGGGGCAACTTAAGGAGGCACCA...GTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACACAGAGGCGCCTGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS TCA 90 bp ATTTGCTGTCCCGGAAAGGGCGGACGACTCCCTGTCCATGCCACCTaGCTCTGGTTTAGCTGCCGGGAGATTTGGGACATGTTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: ICCPGKGGRLPVHAT*LWFSCREIWDMFWP
Trigger: GGGCCAGAACATGTCCCAAATCTCCCGGCAGCTAAACCAGAGTCAGGTGGCATGGACAGGGAGTCGTCCGCCCTTTCCGGGACAGCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303329.9
ENST00000525505.1
ENST00000527771.5
ENST00000533983.5
ENST00000622346.4
CDS CCA 90 bp CGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTaGCACTGTACAGCAGGAGCCTCACTCTGGCCGCAGCTACTCAGA +
Preference number: 5 (lower is better)
Translates to: RGWASFTWASTSQYG*HCTAGASLWPQLLR
Trigger: TCTGAGTAGCTGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp AAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTCGCGCCATCGGTGGACTaGTTCCCTGTACCCCTCATG +
Preference number: 5 (lower is better)
Translates to: KARDTYAWKCACTTVWCLAPSVD*FPVPLM
Trigger: CATGAGGGGTACAGGGAACAAGTCCACCGATGGCGC...GAGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CAA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGGTGAGGAAGGAAGGCTaGTACGCGCCATCGGTGGAC +
Preference number: 5 (lower is better)
Translates to: NPALSPSPVREVSAGHGLVRKEG*YAPSVD
Trigger: GTCCACCGATGGCGCGTACAAGCCTTCCTTCCTCAC...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp TGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAACACCGGCTGGTAGGTaGGGGACGGGGACCTGGGAT +
Preference number: 5 (lower is better)
Translates to: WASFTWASTSQYGWHCTATPAGR*GTGTWD
Trigger: ATCCCAGGTCCCCGTCCCCAACCTACCAGCCGGTGT...TGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGTTCCGAGGGCCGCCCTaGGAACTGCCCGCTACTTTG +
Preference number: 5 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQFRGPP*ELPATL
Trigger: CAAAGTAGCGGGCAGTTCCAAGGGCGGCCCTCGGAA...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp ATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTGTGCCAGTCCCCTGGGTaGGATCTCCTGGCATGGGCA +
Preference number: 5 (lower is better)
Translates to: MGIDITVWVALYSRSLTLCQSPG*DLLAWA
Trigger: TGCCCATGCCAGGAGATCCAACCCAGGGGACTGGCA...CAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGGAGCTGTCTGCTaGCCTGACCTAAGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: RASRARVGLIHMGIDITVWGAVC*PDLRKA
Trigger: GGCTTTCCTTAGGTCAGGCAAGCAGACAGCTCCCCA...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS CCA 90 bp TCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTaGCCGCAGCTACTCAGAAAACGGTGGAAACATGCCCAGGTCGGC +
Preference number: 5 (lower is better)
Translates to: STSQYGWHCTAGASL*PQLLRKRWKHAQVG
Trigger: GCCGACCTGGGCATGTTTCCACCGTTTTCTGAGTAGCTGCGGCCAGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGCGGAGGATGGTGAGCTaGTCTGGCTTCCGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: ECSRAILGHPVAITDPVLRRMVS*SGFRAS
Trigger: ACTGGCTCGGAAGCCAGACAAGCTCACCATCCTCCG...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp GTCCTGATGGAGCCTTACTGTGGCTGCATCTGTGTCCTTGCTGCCGGCCCGGGTATCCACTCCCGGTTCTaGGTGCGAAATCGATACATG +
Preference number: 5 (lower is better)
Translates to: VLMEPYCGCICVLAAGPGIHSRF*VRNRYM
Trigger: CATGTATCGATTTCGCACCAAGAACCGGGAGTGGAT...ACCCGGGCCGGCAGCAAGGACACAGATGCAGCCACAGTAAGGCTCCATCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGACACCGGCTGGTAGGTaGGGGACGGGGACCTGGGAT +
Preference number: 5 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWTPAGR*GTGTWD
Trigger: ATCCCAGGTCCCCGTCCCCAACCTACCAGCCGGTGT...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CAA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGGCTGTGCACTCTGCTaGCCCATTTTCCCAGCATTC +
Preference number: 5 (lower is better)
Translates to: SRARVGLIHMGIDITVWVGCALC*PIFPAF
Trigger: GAATGCTGGGAAAATGGGCAAGCAGAGTGCACAGCC...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTAGGCTGTGCACTCTGCTaGCCCATTTTCCCAGCATTC +
Preference number: 5 (lower is better)
Translates to: RASRARVGLIHMGIDITVGCALC*PIFPAF
Trigger: GAATGCTGGGAAAATGGGCAAGCAGAGTGCACAGCC...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp CATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCACTCTTGCTGCCGGCCCGGGTaGTCACTGTACAGACCTCTT +
Preference number: 5 (lower is better)
Translates to: HGHRHHSMGGTVQQEPHSCCRPG*SLYRPL
Trigger: AAGAGGTCTGTACAGTGACAACCCGGGCCGGCAGCA...AGAGTGAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp CGAGCAGCCGCGGCTGCAGGGGAGAGTGGAGCAATGATGCGCCTGGGGACACACGTAGAATCTGGTATGTaGGAGAGTAGAGCAGAATGT +
Preference number: 5 (lower is better)
Translates to: RAAAAAGESGAMMRLGTHVESGM*ESRAEC
Trigger: ACATTCTGCTCTACTCTCCAACATACCAGATTCTAC...GTGTGTCCCCAGGCGCATCATTGCTCCACTCTCCCCTGCAGCCGCGGCTGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS TCA 90 bp CCTGCAGATGAAAGACCGCCGCGAGCCCATGCACATCCTCATGGATaGCTGCTGCCCTTCTTTCTTGACCGTCCCAGTCTTCAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: PADERPPRAHAHPHG*LLPFFLDRPSLQVQ
Trigger: TTGGACCTGAAGACTGGGACGGTCAAGAAAGAAGGGCAGCAGTCATCCATGAGGATGTGCATGGGCTCGCGGCGGTCTTTCATCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303329.9
ENST00000525103.1
ENST00000527771.5
ENST00000533983.5
ENST00000622346.4
CDS TCA 90 bp GGGGTCTGCCGGGTAGGTGTGGCTCGTTCCAATCCCAAAGGGAGATaGCTGAGTCTTGCTGGACTGAGATGGGATTTGCTGTCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: GVCRVGVARSNPKGR*LSLAGLRWDLLSRK
Trigger: TTTCCGGGACAGCAAATCCCATCTCAGTCCAGCAAGACTCAGTCATCTCCCTTTGGGATTGGAACGAGCCACACCTACCCGGCAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
ENST00000622346.4
CDS TCA 90 bp GCGAGCCCATGCACATCCTCATGGATGACTGCTGCCCTTCTTTCTTaGCCGTCCCAGTCTTCAGGTCCAAGATCCGGCCTTTTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: ASPCTSSWMTAALLS*PSQSSGPRSGLFRG
Trigger: CCCTCTGAAAAGGCCGGATCTTGGACCTGAAGACTGGGACGGTCAAGAAAGAAGGGCAGCAGTCATCCATGAGGATGTGCATGGGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525103.1
CDS GCA 90 bp ATGAAAGACCGCCGCGAGCCCATGCACATCCTCATGGATGACTGCTaGCCTTCTTTCTTGACCGTCCCAGTCTTCAGGTCCAAGATCCGG +
Preference number: 5 (lower is better)
Translates to: MKDRREPMHILMDDC*PSFLTVPVFRSKIR
Trigger: CCGGATCTTGGACCTGAAGACTGGGACGGTCAAGAAAGAAGGGCAGCAGTCATCCATGAGGATGTGCATGGGCTCGCGGCGGTCTTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303329.9
ENST00000525103.1
ENST00000527771.5
ENST00000533983.5
ENST00000622346.4
CDS GCA 90 bp GGTAGGTGTGGCTCGTTCCAATCCCAAAGGGAGATGACTGAGTCTTaGTGGACTGAGATGGGATTTGCTGTCCCGGAAAGGGCGGACGAC +
Preference number: 5 (lower is better)
Translates to: GRCGSFQSQREMTES*WTEMGFAVPERADD
Trigger: GTCGTCCGCCCTTTCCGGGACAGCAAATCCCATCTCAGTCCAGCAAGACTCAGTCATCTCCCTTTGGGATTGGAACGAGCCACACCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303329.9
ENST00000525505.1
ENST00000527771.5
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CAA 90 bp GAGGTCAGCCAGGCAGAAGATTCTAGAGTCAGCTCTTGTTCTTGTCTTGAGACCGCCGGGGTTGCCATCTaGCTCGGAGAGGATAGGCGC +
Preference number: 5 (lower is better)
Translates to: EVSQAEDSRVSSCSCLETAGVAI*LGEDRR
Trigger: GCGCCTATCCTCTCCGAGCAAGATGGCAACCCCGGC...GGTCTCAAGACAAGAACAAGAGCTGACTCTAGAATCTTCTGCCTGGCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303329.9
CDS-3UTR CAA 90 bp CATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCGCCGGGGTTGCCATCTaGCTCGGAGAGGATAGGCGC +
Preference number: 5 (lower is better)
Translates to: HNTSFGHKSQGHLRLEMCAGVAI*LGEDRR
Trigger: GCGCCTATCCTCTCCGAGCAAGATGGCAACCCCGGC...GCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000622346.4
CDS-3UTR CAA 90 bp ACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCCGGAGGATGGTGAGCTaGTCTGGCTTCCGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: TLALATKARDTYAWKCACRRMVS*SGFRAS
Trigger: ACTGGCTCGGAAGCCAGACAAGCTCACCATCCTCCG...GCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CAA 90 bp AGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGTTTCCTGGGAGAAGATaGCATCCGCCTTTTCCACGG +
Preference number: 5 (lower is better)
Translates to: SRARVGLIHMGIDITVWVFPGRR*HPPFPR
Trigger: CCGTGGAAAAGGCGGATGCAATCTTCTCCCAGGAAA...CACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp AATCCAGCTTTGAGCCCGTCTCCAGTCAGAGAGGTATCTGCTGGGCATGGGCTGGAACTGCCCGCTACTTaGTCCACTTTCAGCGAACCC +
Preference number: 5 (lower is better)
Translates to: NPALSPSPVREVSAGHGLELPAT*STFSEP
Trigger: GGGTTCGCTGAAAGTGGACAAAGTAGCGGGCAGTTC...CAGCCCATGCCCAGCAGATACCTCTCTGACTGGAGACGGGCTCAAAGCTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGTTCCGAGGGCCGCCCTaGGAACTGCCCGCTACTTTG +
Preference number: 5 (lower is better)
Translates to: LELFRSLASSCLCGRSEPFRGPP*ELPATL
Trigger: CAAAGTAGCGGGCAGTTCCAAGGGCGGCCCTCGGAA...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CAA 90 bp ATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTCGCCATGGTGCTGGCTTaGCCACTGCGACCAGACTTC +
Preference number: 5 (lower is better)
Translates to: IHMGIDITVWVALYSRSLAMVLA*PLRPDF
Trigger: GAAGTCTGGTCGCAGTGGCAAAGCCAGCACCATGGC...GAGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp AGGGCAAGCAGGGCGAGGGTGGGCCTCATTCACATGGGCATCGACATCACAGTACCTCTCCTAATTTTGTaGCATCCCCTCAGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: RASRARVGLIHMGIDITVPLLIL*HPLSAQ
Trigger: CTGGGCACTGAGGGGATGCAACAAAATTAGGAGAGG...TACTGTGATGTCGATGCCCATGTGAATGAGGCCCACCCTCGCCCTGCTTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp GAGTGTTCTAGAGCCATCCTTGGCCATCCTGTTGCCATCACTGACCCAGTCCTGTGGGGAGCTGTCTGCTaGCCTGACCTAAGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: ECSRAILGHPVAITDPVLWGAVC*PDLRKA
Trigger: GGCTTTCCTTAGGTCAGGCAAGCAGACAGCTCCCCA...CAGGACTGGGTCAGTGATGGCAACAGGATGGCCAAGGATGGCTCTAGAACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp CATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGCAGGAGCCTTGCTGCCGGCCCGGGTaGTCACTGTACAGACCTCTT +
Preference number: 5 (lower is better)
Translates to: HSHGHRHHSMGGTVQQEPCCRPG*SLYRPL
Trigger: AAGAGGTCTGTACAGTGACAACCCGGGCCGGCAGCA...AGGCTCCTGCTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp TGCCCAGCACAGCTCCGGATACAGGGCAGGTTCACAGTCAGCGTGTTCACCTGGGACCCTGGCCTGTTGTaGACCATAACACTAGCTTTG +
Preference number: 5 (lower is better)
Translates to: CPAQLRIQGRFTVSVFTWDPGLL*TITLAL
Trigger: CAAAGCTAGTGTTATGGTCAACAACAGGCCAGGGTC...CCAGGTGAACACGCTGACTGTGAACCTGCCCTGTATCCGGAGCTGTGCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS TCA 90 bp GCGAGCCCATGCACATCCTCATGGATGACTGCTGCCCTTCTTTCTTaGCCGTCCCAGTCTTCAGGTCCAAGATCCGGCCTGTCATTGAGT +
Preference number: 5 (lower is better)
Translates to: ASPCTSSWMTAALLS*PSQSSGPRSGLSLS
Trigger: ACTCAATGACAGGCCGGATCTTGGACCTGAAGACTGGGACGGTCAAGAAAGAAGGGCAGCAGTCATCCATGAGGATGTGCATGGGCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
ENST00000622346.4
CDS GCA 90 bp CAGATGAAAGACCGCCGCGAGCCCATGCACATCCTCATGGATGACTaGTGCCCTTCTTTCTTGACCGTCCCAGTCTTCAGGTCCAAGATC +
Preference number: 5 (lower is better)
Translates to: QMKDRREPMHILMDD*CPSFLTVPVFRSKI
Trigger: GATCTTGGACCTGAAGACTGGGACGGTCAAGAAAGAAGGGCAGCAGTCATCCATGAGGATGTGCATGGGCTCGCGGCGGTCTTTCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303329.9
ENST00000525103.1
ENST00000527771.5
ENST00000533983.5
ENST00000622346.4
CDS GCA 90 bp ACGGTGGAAACATGCCCAGGTCGGCAAAGTCTTCGATGTTATAGTTaGCAGTCCCCTGGGTTGGATCTCCTGGCATGGGCAGCATGTCCT +
Preference number: 5 (lower is better)
Translates to: TVETCPGRQSLRCYS*QSPGLDLLAWAACP
Trigger: AGGACATGCTGCCCATGCCAGGAGATCCAACCCAGGGGACTGGCAACTATAACATCGAAGACTTTGCCGACCTGGGCATGTTTCCACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp TTGCCCCAGACTCCAGATGGTCAAAGAAAAGGTGAATGTCCAGGTGGCTCATGGGCGCCATCGGTGGACTaGTTCCCTGTACCCCTCATG +
Preference number: 5 (lower is better)
Translates to: LPQTPDGQRKGECPGGSWAPSVD*FPVPLM
Trigger: CATGAGGGGTACAGGGAACAAGTCCACCGATGGCGC...CCATGAGCCACCTGGACATTCACCTTTTCTTTGACCATCTGGAGTCTGGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CAA 90 bp GAGCATTCCGGCCTCCAAGGCTGGGCGGTACTGGCATGGGAGGCTCTTTTGCAAGCAATATTTACTGCCTaGTCCCACATCAGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: EHSGLQGWAVLAWEALLQAIFTA*SHISVF
Trigger: GAAGACGCTGATGTGGGACAAGGCAGTAAATATTGC...TTGCAAAAGAGCCTCCCATGCCAGTACCGCCCAGCCTTGGAGGCCGGAATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp GGTGGGCCTCATTCACATGGGCATCGACATCACAGTATGGGTGGCACTGTACAGGAACTGCCCGCTACTTaGTCCACTTTCAGCGAACCC +
Preference number: 5 (lower is better)
Translates to: GGPHSHGHRHHSMGGTVQELPAT*STFSEP
Trigger: GGGTTCGCTGAAAGTGGACAAAGTAGCGGGCAGTTC...CTGTACAGTGCCACCCATACTGTGATGTCGATGCCCATGTGAATGAGGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000527771.5
ENST00000533983.5
CDS-3UTR CAA 90 bp GACCATAACACTAGCTTTGGCCACAAAAGCCAGGGACACCTACGCTTGGAAATGTTCCGAGGGCCGCCCTaGGAACTGCCCGCTACTTTG +
Preference number: 5 (lower is better)
Translates to: DHNTSFGHKSQGHLRLEMFRGPP*ELPATL
Trigger: CAAAGTAGCGGGCAGTTCCAAGGGCGGCCCTCGGAA...CATTTCCAAGCGTAGGTGTCCCTGGCTTTTGTGGCCAAAGCTAGTGTTATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CAA 90 bp CTAGAGCTGTTCCGGTCACTGGCTTCTTCCTGTTTATGTGGTAGGTCAGAACCGGCCATGGTGCTGGCTTaGCCACTGCGACCAGACTTC +
Preference number: 5 (lower is better)
Translates to: LELFRSLASSCLCGRSEPAMVLA*PLRPDF
Trigger: GAAGTCTGGTCGCAGTGGCAAAGCCAGCACCATGGC...CGGTTCTGACCTACCACATAAACAGGAAGAAGCCAGTGACCGGAACAGCTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303329.9
ENST00000533983.5
ENST00000622346.4
CDS-3UTR CAA 90 bp GCCTCACTCCACTCTCAGGTTCCTAGAACCAATGCCACTCTTCTAGGTCCTGCAGTGTCTCTGTGCTTCTaGGCTCCAGCTGGCAGAACG +
Preference number: 5 (lower is better)
Translates to: ASLHSQVPRTNATLLGPAVSLCF*APAGRT
Trigger: CGTTCTGCCAGCTGGAGCCAAGAAGCACAGAGACAC...TGCAGGACCTAGAAGAGTGGCATTGGTTCTAGGAACCTGAGAGTGGAGTGAGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp AAAAGCCAGGGACACCTACGCTTGGAAATGTGCCTGCACCACTGTGTGGTGCCTGCAGGGATGCACGGGTaGTTTCTGAGCAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: KSQGHLRLEMCLHHCVVPAGMHG*FLSKQH
Trigger: ATGCTGCTTGCTCAGAAACAACCCGTGCATCCCTGC...AGGCACCACACAGTGGTGCAGGCACATTTCCAAGCGTAGGTGTCCCTGGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303329.9
ENST00000533983.5
CDS-3UTR CAA 90 bp CTATCTACATCTGTAAAGAAGGGCCAGGCCTCTGACCTCAAGGCGTGCTGTCCTGGTCCCCCAGCAACATaGAGCACATGGATCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LSTSVKKGQASDLKACCPGPPAT*STWISL
Trigger: CAGGGAGATCCATGTGCTCAATGTTGCTGGGGGACC...AGGACAGCACGCCTTGAGGTCAGAGGCCTGGCCCTTCTTTACAGATGTAGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following