RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARNT (Homo sapiens)

Ensembl gene IDs: ENSG00000143437

Ensembl transcript IDs: ENST00000354396.6, ENST00000358595.10, ENST00000468970.1, ENST00000471844.6, ENST00000478972.2, ENST00000497108.6, ENST00000504358.1, ENST00000505755.5, ENST00000505979.5, ENST00000510273.1, ENST00000512296.5, ENST00000515192.5

Found 694 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTGCCACTGTGGCCAGACACCCACACCCTCTGCTGTCCGTGTCTaGAATTGTCCTGCAGTCTGTCCAGTCTCAGGAGCAAAGTTAGAT +
Preference number: 1 (lower is better)
Translates to: PCHCGQTPTPSAVRV*NCPAVCPVSGAKLD
Trigger: ATCTAACTTTGCTCCTGAGACTGGACAGACTGCAGGACAATTCCAGACACGGACAGCAGAGGGTGTGGGTGTCTGGCCACAGTGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR CCA 90 bp TACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCAAATaGACATTCCTTTGGCCTCTTCAAGGCCACCCTTGCTCCTCAGTC +
Preference number: 1 (lower is better)
Translates to: YLAPDWRHKEGKLSK*TFLWPLQGHPCSSV
Trigger: GACTGAGGAGCAAGGGTGGCCTTGAAGAGGCCAAAGGAATGTCCATTTGCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR GCA 90 bp GAGATGGGTGTCCAGGCCCCATCTATCATACGGAATTATGATACTTaGACTCTAAAGCAAAACCCAATCTCAAGATTGGAGGGAGCAAAG +
Preference number: 1 (lower is better)
Translates to: EMGVQAPSIIRNYDT*TLKQNPISRLEGAK
Trigger: CTTTGCTCCCTCCAATCTTGAGATTGGGTTTTGCTTTAGAGTGCAAGTATCATAATTCCGTATGATAGATGGGGCCTGGACACCCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR TCA 90 bp GGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATaGGGATTTTCACTGGGACGGCTAATCCAAGAAGTTGAGTTTCCA +
Preference number: 1 (lower is better)
Translates to: GYFARGLRIWFTLQQ*GFSLGRLIQEVEFP
Trigger: TGGAAACTCAACTTCTTGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR TCA 90 bp GATAAGGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTaGATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCT +
Preference number: 1 (lower is better)
Translates to: DKVRAPKAAVTQLYH*MCSITDNRINSRLS
Trigger: AGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACCTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR TCA 90 bp GGCCAGAGAGACTTAAATCTCAGTTGCTTGCTAAACTGGGTATTTTaGGTATGGGATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATT +
Preference number: 1 (lower is better)
Translates to: GQRDLNLSCLLNWVF*VWDERGYFARGLRI
Trigger: AATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCATCCCATACTCAAAATACCCAGTTTAGCAAGCAACTGAGATTTAAGTCTCTCTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR GCA 90 bp GTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTaGTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCA +
Preference number: 1 (lower is better)
Translates to: VFDNRQSYQQPTFYI*FTVVYWLGMDASAA
Trigger: TGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR CCA 90 bp CGCATTTATATGGCTATTGTTAATTACCAAGTGACCCTGTTGAGATaGGTGTCCAGGCCCCATCTATCATACGGAATTATGATACTTGCA +
Preference number: 1 (lower is better)
Translates to: RIYMAIVNYQVTLLR*VSRPHLSYGIMILA
Trigger: TGCAAGTATCATAATTCCGTATGATAGATGGGGCCTGGACACCCATCTCAACAGGGTCACTTGGTAATTAACAATAGCCATATAAATGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR CCA 90 bp CAGAATTTCTTTCCAAAAACAAGCCATACTATCCAAGGCAAACAGTaGATGTCAGGTTCTTCTAACCTGCCTCTTGATCTCAGCACAAAT +
Preference number: 1 (lower is better)
Translates to: QNFFPKTSHTIQGKQ*MSGSSNLPLDLSTN
Trigger: ATTTGTGCTGAGATCAAGAGGCAGGTTAGAAGAACCTGACATCCACTGTTTGCCTTGGATAGTATGGCTTGTTTTTGGAAAGAAATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR TCA 90 bp CTTAAATCTCAGTTGCTTGCTAAACTGGGTATTTTGAGTATGGGATaGAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACT +
Preference number: 1 (lower is better)
Translates to: LKSQLLAKLGILSMG*KRLLCKRASYLVYT
Trigger: AGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCATCCCATACTCAAAATACCCAGTTTAGCAAGCAACTGAGATTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR CCA 90 bp TTATGTTTGTATGTCTGGAGCTTAAACTATAGATTCCTCTGGTTGTaGGTGCCTGTTGTTTATGAACTGGAAAGGAATGATAAAGCCGCA +
Preference number: 1 (lower is better)
Translates to: LCLYVWSLNYRFLWL*VPVVYELERNDKAA
Trigger: TGCGGCTTTATCATTCCTTTCCAGTTCATAAACAACAGGCACCCACAACCAGAGGAATCTATAGTTTAAGCTCCAGACATACAAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
3UTR CCA 90 bp AGCCGACTTTCTATATTTGCTTTACAGTTGTATATTGGCTGGGCATaGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCT +
Preference number: 1 (lower is better)
Translates to: SRLSIFALQLYIGWA*MQAQQRRLFKYSLA
Trigger: AGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATATAGAAAGTCGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR CCA 90 bp TGTGCCTTATGTTTGTATGTCTGGAGCTTAAACTATAGATTCCTCTaGTTGTGGGTGCCTGTTGTTTATGAACTGGAAAGGAATGATAAA +
Preference number: 1 (lower is better)
Translates to: CALCLYVWSLNYRFL*LWVPVVYELERNDK
Trigger: TTTATCATTCCTTTCCAGTTCATAAACAACAGGCACCCACAACCAGAGGAATCTATAGTTTAAGCTCCAGACATACAAACATAAGGCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
3UTR GCA 90 bp GACTTTCTATATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATaGAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAA +
Preference number: 1 (lower is better)
Translates to: DFLYLLYSCILAGHG*KRSKDVYLNILWLQ
Trigger: TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATATAGAAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR CCA 90 bp ATCAACAGCCGACTTTCTATATTTGCTTTACAGTTGTATATTGGCTaGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCT +
Preference number: 1 (lower is better)
Translates to: INSRLSIFALQLYIG*AWMQAQQRRLFKYS
Trigger: AGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATATAGAAAGTCGGCTGTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp TCAAGTCCCGACTCTTCCCCTCTCTCCCAAGAACCCAGGCAACGCCCACCCCAAGTGACCCTGTTGAGATaGGTGTCCAGGCCCCATCTA +
Preference number: 2 (lower is better)
Translates to: SSPDSSPLSQEPRQRPPQVTLLR*VSRPHL
Trigger: TAGATGGGGCCTGGACACCCATCTCAACAGGGTCAC...TTGGGGTGGGCGTTGCCTGGGTTCTTGGGAGAGAGGGGAAGAGTCGGGACTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358595.10
3UTR CAA 90 bp CCACTGTGGCCAGACACCCACACCCTCTGCTGTCCGTGTCTGGAATaGTCCTGCAGTCTGTCCAGTCTCAGGAGCAAAGTTAGATCCACG +
Preference number: 2 (lower is better)
Translates to: PLWPDTHTLCCPCLE*SCSLSSLRSKVRST
Trigger: CGTGGATCTAACTTTGCTCCTGAGACTGGACAGACTGCAGGACAATTCCAGACACGGACAGCAGAGGGTGTGGGTGTCTGGCCACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR-3UTR GCA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCCTTCAAGGCCACCCTTaGTCCTCAGTCCCCTATGAC +
Preference number: 2 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSLQGHP*SSVPYD
Trigger: GTCATAGGGGACTGAGGAGCAAGGGTGGCCTTGAAG...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR GCA 90 bp ATCATCCGACCTGGCAAACCGCTCCTTATCGTTAGACATCTGATCATCATCACACTGAGGCAGGAGAATTaGTGGAACCCGGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: IIRPGKPLLIVRHLIIITLRQEN*WNPGGG
Trigger: TCCACCTCCCGGGTTCCAGCAATTCTCCTGCCTCAG...TGTGATGATGATCAGATGTCTAACGATAAGGAGCGGTTTGCCAGGTCGGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
3UTR-3UTR CCA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCTCTGATCTCCCAGCATaGACAGCATCTCCTGGAAGA +
Preference number: 2 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSSDLPA*TASPGR
Trigger: TCTTCCAGGAGATGCTGTCCATGCTGGGAGATCAGA...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR-3UTR TCA 90 bp GGCAAGTCTCTCTTTATCCGCAGAGCTCTGCTCATCATCCGACCTGGCAAACCGTTATCGTTAGACATCTaGTCATCATCACACCTCAAA +
Preference number: 2 (lower is better)
Translates to: GKSLFIRRALLIIRPGKPLSLDI*SSSHLK
Trigger: TTTGAGGTGTGATGATGATCAGATGTCTAACGATAA...CGGTTTGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAAAGAGAGACTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
3UTR-3UTR CCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGCCAGGTTGCTGTGCTaGCGGTTGTTGAACATGTTG +
Preference number: 2 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDARLLC*RLLNML
Trigger: CAACATGTTCAACAACCGCCAGCACAGCAACCTGGC...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR-3UTR CCA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAATGGACAGCATCTCCTaGAAGACCTCAGGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPMDSIS*KTSGWP
Trigger: TGGCCAGCCTGAGGTCTTCCAGGAGATGCTGTCCAT...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR-3UTR GCA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCCTGGCCAGGTTGCTGTaGTGGCGGTTGTTGAACATG +
Preference number: 2 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSLARLL*WRLLNM
Trigger: CATGTTCAACAACCGCCAGCACAGCAACCTGGCCAG...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR-3UTR CCA 90 bp AATCCAGAAAAGGACATACTGGGGGAAGGCATCCAGATGTGCCCTAGTGGTTTTGGGAAACTCAGCAAATaGACATTCCTTTGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: NPEKDILGEGIQMCPSGFGKLSK*TFLWPL
Trigger: AAGAGGCCAAAGGAATGTCCATTTGCTGAGTTTCCC...AAAACCACTAGGGCACATCTGGATGCCTTCCCCCAGTATGTCCTTTTCTGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358595.10
3UTR-3UTR CCA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCGGGAAACTCAGCAAATaGACATTCCTTTGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSGKLSK*TFLWPL
Trigger: AAGAGGCCAAAGGAATGTCCATTTGCTGAGTTTCCC...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCTGGAAGACCTCAGGCTaGCCAGGTTGCTGTGCTGGC +
Preference number: 2 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLWKTSG*PGCCAG
Trigger: GCCAGCACAGCAACCTGGCCAGCCTGAGGTCTTCCA...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR CAA 90 bp CCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTaGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: PEGLLTGSKKSLCSN*LKPHIYLQCFMVLK
Trigger: TTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR GCA 90 bp ATCTTTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTTCTTTCCAGAGGGACTaGTCACAGGCAGCAAAAAGA +
Preference number: 2 (lower is better)
Translates to: IFMAKSRVPESVYLASLFSFQRD*SQAAKR
Trigger: TCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGA...AAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGTATATTGGCTGGGCATaGATGCAAGCGCAGCAAAGA +
Preference number: 2 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPYIGWA*MQAQQR
Trigger: TCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATA...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp ACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACCAGTTGTATATTGGCTaGGCATGGATGCAAGCGCAG +
Preference number: 2 (lower is better)
Translates to: TLQEGFVFGLHSNNEDFHQLYIG*AWMQAQ
Trigger: CTGCGCTTGCATCCATGCCCAGCCAATATACAACTG...GTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp TTGTATGTCTGGAGCTTAAACTATAGATTCCTCTGGTTGTGGGTGCCTGTTGTTTACCTGGCACCAGACTaGAGACATAAGGAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: LYVWSLNYRFLWLWVPVVYLAPD*RHKEGK
Trigger: TTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTA...AACAACAGGCACCCACAACCAGAGGAATCTATAGTTTAAGCTCCAGACATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
3UTR CAA 90 bp CTATCCAAGGCAAACAGTGGATGTCAGGTTCTTCTAACCTGCCTCTaGATCTCAGCACAAATCAACACTATACAATTTCAGGTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: LSKANSGCQVLLTCL*ISAQINTIQFQVRR
Trigger: TCTCCTGACCTGAAATTGTATAGTGTTGATTTGTGCTGAGATCAAGAGGCAGGTTAGAAGAACCTGACATCCACTGTTTGCCTTGGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR TCA 90 bp TACCTGAGGAAGGTAAAGGGTGAGGGTAGTAACCTGTATCCGCATTTATATGGCATTTTGAGTATGGGATaGAAGAGGCTACTTTGCAAG +
Preference number: 2 (lower is better)
Translates to: YLRKVKGEGSNLYPHLYGILSMG*KRLLCK
Trigger: CTTGCAAAGTAGCCTCTTTCATCCCATACTCAAAAT...GCCATATAAATGCGGATACAGGTTACTACCCTCACCCTTTACCTTCCTCAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCGGCTGCAATACTAAGTaGAAAATACCTGGAAGATTT +
Preference number: 2 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSGCNTK*KIPGRF
Trigger: AAATCTTCCAGGTATTTTCCACTTAGTATTGCAGCC...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCTATATTGGCTGGGCATaGATGCAAGCGCAGCAAAGA +
Preference number: 2 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSYIGWA*MQAQQR
Trigger: TCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATA...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp TATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAAGAGCAGCATTATCTTTATaGCCAAGTCTCGGGTTCCAG +
Preference number: 2 (lower is better)
Translates to: YLVYTPTMRIFTGTANPRAALSL*PSLGFQ
Trigger: CTGGAACCCGAGACTTGGCCATAAAGATAATGCTGC...TCTTGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR TCA 90 bp TACCTGAGGAAGGTAAAGGGTGAGGGTAGTAACCTGTATCCGCATTTATATGGCCTCCTCAGTCCCCTATaGCTACATTTAATATATCTT +
Preference number: 2 (lower is better)
Translates to: YLRKVKGEGSNLYPHLYGLLSPL*LHLIYL
Trigger: AAGATATATTAAATGTAGTCATAGGGGACTGAGGAG...GCCATATAAATGCGGATACAGGTTACTACCCTCACCCTTTACCTTCCTCAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR GCA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCGACTTAAATCTCAGTTaGTTGCTAAACTGGGTATTT +
Preference number: 2 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSDLNLS*LLNWVF
Trigger: AAATACCCAGTTTAGCAAGCAACTGAGATTTAAGTC...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGATCCAAGGCAAACAGTaGATGTCAGGTTCTTCTAAC +
Preference number: 2 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPIQGKQ*MSGSSN
Trigger: GTTAGAAGAACCTGACATCCACTGTTTGCCTTGGAT...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGTTTACAGTTGTATATTaGCTGGGCATGGATGCAAGC +
Preference number: 2 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWFTVVY*LGMDAS
Trigger: GCTTGCATCCATGCCCAGCCAATATACAACTGTAAA...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp AGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAAGCAGCATTATCTTTATaGCCAAGTCTCGGGTTCCAG +
Preference number: 2 (lower is better)
Translates to: SSNPALSLNVFDNRQSYQAALSL*PSLGFQ
Trigger: CTGGAACCCGAGACTTGGCCATAAAGATAATGCTGC...TTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACCCTAGTTGTGGCCTCTaGATTGTGTTGGAGAGTGTA +
Preference number: 2 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYPSCGL*IVLESV
Trigger: TACACTCTCCAACACAATCCAGAGGCCACAACTAGG...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR CAA 90 bp TGTATCCGCATTTATATGGCTATTGTTAATTACCAAGTGACCCTGTaGAGATGGGTGTCCAGGCCCCATCTATCATACGGAATTATGATA +
Preference number: 2 (lower is better)
Translates to: CIRIYMAIVNYQVTL*RWVSRPHLSYGIMI
Trigger: TATCATAATTCCGTATGATAGATGGGGCCTGGACACCCATCTCAACAGGGTCACTTGGTAATTAACAATAGCCATATAAATGCGGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR CAA 90 bp GCCTTATGTTTGTATGTCTGGAGCTTAAACTATAGATTCCTCTGGTaGTGGGTGCCTGTTGTTTATGAACTGGAAAGGAATGATAAAGCC +
Preference number: 2 (lower is better)
Translates to: ALCLYVWSLNYRFLW*WVPVVYELERNDKA
Trigger: GGCTTTATCATTCCTTTCCAGTTCATAAACAACAGGCACCCACAACCAGAGGAATCTATAGTTTAAGCTCCAGACATACAAACATAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
3UTR-3UTR TCA 90 bp TATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAAGAACCCAGCTTTATCACTaGATGTGTTCGATAACAGAC +
Preference number: 2 (lower is better)
Translates to: YLVYTPTMRIFTGTANPRTQLYH*MCSITD
Trigger: GTCTGTTATCGAACACATTCAGTGATAAAGCTGGGT...TCTTGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR TCA 90 bp TCTTCAGAATTTCTTTCCAAAAACAAGCCATACTATCCAAGGCAAACAGTGGATTTGCTCACTAGAACTTaGACGATGATGAGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: SSEFLSKNKPYYPRQTVDLLTRT*TMMRLL
Trigger: CAGCAGCCTCATCATCGTTCAAGTTCTAGTGAGCAA...ATCCACTGTTTGCCTTGGATAGTATGGCTTGTTTTTGGAAAGAAATTCTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR-3UTR GCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCTCTTTCCAGAGGGACTaGTCACAGGCAGCAAAAAGA +
Preference number: 2 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLSFQRD*SQAAKR
Trigger: TCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGA...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR TCA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAAATCTTCCAGATAAGGTaGGAGCACCAAAAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTEIFQIR*EHQKQQ
Trigger: CTGCTGCTTTTGGTGCTCTCACCTTATCTGGAAGAT...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR GCA 90 bp AGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAAAGCAAAAAGAGCCTATaGTCAAACTTGCTAAAGCCC +
Preference number: 2 (lower is better)
Translates to: SSNPALSLNVFDNRQSYQSKKSL*SNLLKP
Trigger: GGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT...TTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR GCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACAGCAAAAAGAGCCTATaGTCAAACTTGCTAAAGCCC +
Preference number: 2 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYSKKSL*SNLLKP
Trigger: GGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR CAA 90 bp TGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTaGGCTGCAATACTAAGTGGAAAATACCTGGAAGATTTAACTCCT +
Preference number: 2 (lower is better)
Translates to: WAWMQAQQRRLFKYS*AAILSGKYLEDLTP
Trigger: AGGAGTTAAATCTTCCAGGTATTTTCCACTTAGTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR CAA 90 bp ATCGTATCAACAGCCGACTTTCTATATTTGCTTTACAGTTGTATATaGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAAT +
Preference number: 2 (lower is better)
Translates to: IVSTADFLYLLYSCI*AGHGCKRSKDVYLN
Trigger: ATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATATAGAAAGTCGGCTGTTGATACGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR TCA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAACATGGTCCTCAAATATaGGGACATTTCTCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTEHGPQI*GHFSSP
Trigger: AGGAGAGGAGAAATGTCCTCATATTTGAGGACCATG...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR TCA 90 bp ACCTGTATCCGCATTTATATGGCTATTGTTAATTACCAAGTGACCCTGTTGAGAATTTTGAGTATGGGATaGAAGAGGCTACTTTGCAAG +
Preference number: 2 (lower is better)
Translates to: TCIRIYMAIVNYQVTLLRILSMG*KRLLCK
Trigger: CTTGCAAAGTAGCCTCTTTCATCCCATACTCAAAAT...TCTCAACAGGGTCACTTGGTAATTAACAATAGCCATATAAATGCGGATACAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CCA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTATCCAAGGCAAACAGTaGATGTCAGGTTCTTCTAAC +
Preference number: 2 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDIIQGKQ*MSGSSN
Trigger: GTTAGAAGAACCTGACATCCACTGTTTGCCTTGGAT...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR GCA 72 bp CTGGCCCTGCCACTGTGGCCAGACACCCACACCCTCTaGTGTCCGTGTCTGGAATTGTCCTGCAGTCTGTCC +
Preference number: 3 (lower is better)
Translates to: LALPLWPDTHTL*CPCLELSCSLS
Trigger: GGACAGACTGCAGGACAATTCCAGACACGGACAGCAGAGGGTGTGGGTGTCTGGCCACAGTGGCAGGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR-3UTR CAA 90 bp CTCTTTATCCGCAGAGCTCTGCTCATCATCCGACCTGGCAAACCGCTCCTTATCGCTGAGGCAGGAGAATaGCTGGAACCCGGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: LFIRRALLIIRPGKPLLIAEAGE*LEPGRW
Trigger: CCACCTCCCGGGTTCCAGCAATTCTCCTGCCTCAGC...GATAAGGAGCGGTTTGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
3UTR-3UTR CAA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCCTCAGGCTGGCCAGGTaGCTGTGCTGGCGGTTGTTG +
Preference number: 3 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSLRLAR*LCWRLL
Trigger: CAACAACCGCCAGCACAGCAACCTGGCCAGCCTGAG...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR GCA 72 bp ACCCACACCCTCTGCTGTCCGTGTCTGGAATTGTCCTaGAGTCTGTCCAGTCTCAGGAGCAAAGTTAGATCC +
Preference number: 3 (lower is better)
Translates to: THTLCCPCLELS*SLSSLRSKVRS
Trigger: GGATCTAACTTTGCTCCTGAGACTGGACAGACTGCAGGACAATTCCAGACACGGACAGCAGAGGGTGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR GCA 72 bp TTTTCCCTGGCAAGTCTCTCTTTATCCGCAGAGCTCTaGTCATCATCCGACCTGGCAAACCGCTCCTTATCG +
Preference number: 3 (lower is better)
Translates to: FSLASLSLSAEL*SSSDLANRSLS
Trigger: CGATAAGGAGCGGTTTGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAAAGAGAGACTTGCCAGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504358.1
3UTR CCA 72 bp AGGGGTAAATTAGCTGTGGGACCTAGTTGTGGCCTCTaGATTGTGTTGGAGAGTGTAGGCCGTGGTTCTTGG +
Preference number: 3 (lower is better)
Translates to: RGKLAVGPSCGL*IVLESVGRGSW
Trigger: CCAAGAACCACGGCCTACACTCTCCAACACAATCCAGAGGCCACAACTAGGTCCCACAGCTAATTTACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR-3UTR CAA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCTACCAAGTGACCCTGTaGAGATGGGTGTCCAGGCCC +
Preference number: 3 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSYQVTL*RWVSRP
Trigger: GGGCCTGGACACCCATCTCAACAGGGTCACTTGGTA...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR CCA 72 bp CCAGACTGGAGACATAAGGAAGGGAAACTCAGCAAATaGACATTCCTTTGGCCTCTTCAAGGCCACCCTTGC +
Preference number: 3 (lower is better)
Translates to: PDWRHKEGKLSK*TFLWPLQGHPC
Trigger: GCAAGGGTGGCCTTGAAGAGGCCAAAGGAATGTCCATTTGCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGGGCCTCTGGATTGTGTaGGAGAGTGTAGGCCGTGGT +
Preference number: 3 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPGLWIV*ESVGRG
Trigger: ACCACGGCCTACACTCTCCAACACAATCCAGAGGCC...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR GCA 72 bp CCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATaGTCAAACTTGCTAAAGCCCCATATATACCTACAA +
Preference number: 3 (lower is better)
Translates to: PEGLLTGSKKSL*SNLLKPHIYLQ
Trigger: TTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCATGAAAGAGGCTACTTaGCAAGAGGGCTTCGTATTT +
Preference number: 3 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSMKEAT*QEGFVF
Trigger: AAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCACTGTGCTGGCGGTTGTaGAACATGTTGCTCACTAGA +
Preference number: 3 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPLCWRL*NMLLTR
Trigger: TCTAGTGAGCAACATGTTCAACAACCGCCAGCACAG...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR-3UTR CAA 90 bp GGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAATCGGGGACAAATTTaGCATAACTCCCTAATAGGG +
Preference number: 3 (lower is better)
Translates to: GESTKSSSNPALSLNVFDNRGQI*HNSLIG
Trigger: CCCTATTAGGGAGTTATGCAAAATTTGTCCCCGATT...ATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp CCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTTTGCTGTGCTGGCGGTaGTTGAACATGTTGCTCACT +
Preference number: 3 (lower is better)
Translates to: PMLKLAKAPYIPTMFHGPLLCWR*LNMLLT
Trigger: AGTGAGCAACATGTTCAACAACCGCCAGCACAGCAA...AGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR TCA 72 bp GCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATaGGGATTTTCACTGGGACGGCTAATCCAAGAAGTT +
Preference number: 3 (lower is better)
Translates to: ARGLRIWFTLQQ*GFSLGRLIQEV
Trigger: AACTTCTTGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR TCA 72 bp GATGGGTGTCCAGGCCCCATCTATCATACGGAATTATaGTACTTGCACTCTAAAGCAAAACCCAATCTCAAG +
Preference number: 3 (lower is better)
Translates to: DGCPGPIYHTEL*YLHSKAKPNLK
Trigger: CTTGAGATTGGGTTTTGCTTTAGAGTGCAAGTATCATAATTCCGTATGATAGATGGGGCCTGGACACCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR TCA 72 bp TCCGACCTGGCAAACCGCTCCTTATCGTTAGACATCTaGTCATCATCACACCTCAAAAATTTACTGTTCCCT +
Preference number: 3 (lower is better)
Translates to: SDLANRSLSLDI*SSSHLKNLLFP
Trigger: AGGGAACAGTAAATTTTTGAGGTGTGATGATGATCAGATGTCTAACGATAAGGAGCGGTTTGCCAGGTCGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504358.1
3UTR CCA 72 bp ATGGCTATTGTTAATTACCAAGTGACCCTGTTGAGATaGGTGTCCAGGCCCCATCTATCATACGGAATTATG +
Preference number: 3 (lower is better)
Translates to: MAIVNYQVTLLR*VSRPHLSYGIM
Trigger: CATAATTCCGTATGATAGATGGGGCCTGGACACCCATCTCAACAGGGTCACTTGGTAATTAACAATAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp GGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATACAGTCCTAAAAGCCTaGGAGATTCATTCCATTTCT +
Preference number: 3 (lower is better)
Translates to: GESTKSSSNPALSLNVFDTVLKA*EIHSIS
Trigger: AGAAATGGAATGAATCTCCAAGGCTTTTAGGACTGT...ATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp AATCCAGAAAAGGACATACTGGGGGAAGGCATCCAGATGTGCCCTAGTGGTTTTAGACTTAAATCTCAGTaGCTTGCTAAACTGGGTATT +
Preference number: 3 (lower is better)
Translates to: NPEKDILGEGIQMCPSGFRLKSQ*LAKLGI
Trigger: AATACCCAGTTTAGCAAGCAACTGAGATTTAAGTCT...AAAACCACTAGGGCACATCTGGATGCCTTCCCCCAGTATGTCCTTTTCTGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358595.10
3UTR-3UTR CAA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCTGTCCGTGTCTGGAATaGTCCTGCAGTCTGTCCAGT +
Preference number: 3 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLCPCLE*SCSLSS
Trigger: ACTGGACAGACTGCAGGACAATTCCAGACACGGACA...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
3UTR TCA 72 bp AGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTaGATGTGTTCGATAACAGACAATCGTATCAACAGC +
Preference number: 3 (lower is better)
Translates to: RAPKAAVTQLYH*MCSITDNRINS
Trigger: GCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR TCA 72 bp CAGTTGCTTGCTAAACTGGGTATTTTGAGTATGGGATaGAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTG +
Preference number: 3 (lower is better)
Translates to: QLLAKLGILSMG*KRLLCKRASYL
Trigger: CAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCATCCCATACTCAAAATACCCAGTTTAGCAAGCAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR CCA 72 bp TTTCCAAAAACAAGCCATACTATCCAAGGCAAACAGTaGATGTCAGGTTCTTCTAACCTGCCTCTTGATCTC +
Preference number: 3 (lower is better)
Translates to: FPKTSHTIQGKQ*MSGSSNLPLDL
Trigger: GAGATCAAGAGGCAGGTTAGAAGAACCTGACATCCACTGTTTGCCTTGGATAGTATGGCTTGTTTTTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp CCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCTTTACAGTTGTATATaGGCTGGGCATGGATGCAAG +
Preference number: 3 (lower is better)
Translates to: PMLKLAKAPYIPTMFHGPLYSCI*AGHGCK
Trigger: CTTGCATCCATGCCCAGCCAATATACAACTGTAAAG...AGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR CCA 72 bp TGTTTGTATGTCTGGAGCTTAAACTATAGATTCCTCTaGTTGTGGGTGCCTGTTGTTTATGAACTGGAAAGG +
Preference number: 3 (lower is better)
Translates to: CLYVWSLNYRFL*LWVPVVYELER
Trigger: CCTTTCCAGTTCATAAACAACAGGCACCCACAACCAGAGGAATCTATAGTTTAAGCTCCAGACATACAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
3UTR-3UTR CAA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGACAGTCCTAAAAGCCTaGGAGATTCATTCCATTTCT +
Preference number: 3 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWTVLKA*EIHSIS
Trigger: AGAAATGGAATGAATCTCCAAGGCTTTTAGGACTGT...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp AGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACTTCTAACCTGCCTCTaGATCTCAGCACAAATCAAC +
Preference number: 3 (lower is better)
Translates to: SSNPALSLNVFDNRQSYQLLTCL*ISAQIN
Trigger: GTTGATTTGTGCTGAGATCAAGAGGCAGGTTAGAAG...TTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATAGCCTATGCTCAAACTaGCTAAAGCCCCATATATAC +
Preference number: 3 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNSLCSN*LKPHIY
Trigger: GTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCT...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp ATCTTTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTATATTTGCTTTACAGTaGTATATTGGCTGGGCATGG +
Preference number: 3 (lower is better)
Translates to: IFMAKSRVPESVYLASLFIFALQ*YIGWAW
Trigger: CCATGCCCAGCCAATATACAACTGTAAAGCAAATAT...AAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp AGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAAAGCCTATGCTCAAACTaGCTAAAGCCCCATATATAC +
Preference number: 3 (lower is better)
Translates to: SSNPALSLNVFDNRQSYQSLCSN*LKPHIY
Trigger: GTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCT...TTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTAATCGGGGACAAATTTaGCATAACTCCCTAATAGGG +
Preference number: 3 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCNRGQI*HNSLIG
Trigger: CCCTATTAGGGAGTTATGCAAAATTTGTCCCCGATT...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp CCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTATATTTGCTTTACAGTaGTATATTGGCTGGGCATGG +
Preference number: 3 (lower is better)
Translates to: PMLKLAKAPYIPTMFHGPIFALQ*YIGWAW
Trigger: CCATGCCCAGCCAATATACAACTGTAAAGCAAATAT...AGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCACAGAAAGTGTTTATCTaGCCAGCCTATTTAGGTAAT +
Preference number: 3 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPQKVFI*PAYLGN
Trigger: ATTACCTAAATAGGCTGGCAAGATAAACACTTTCTG...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCACAGTCCTAAAAGCCTaGGAGATTCATTCCATTTCT +
Preference number: 3 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLTVLKA*EIHSIS
Trigger: AGAAATGGAATGAATCTCCAAGGCTTTTAGGACTGT...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR-3UTR CAA 90 bp AGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGAAAGTGTTTATCTaGCCAGCCTATTTAGGTAAT +
Preference number: 3 (lower is better)
Translates to: SSNPALSLNVFDNRQSYQQKVFI*PAYLGN
Trigger: ATTACCTAAATAGGCTGGCAAGATAAACACTTTCTG...TTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR CCA 72 bp AAATTAAAGACACAATGTGCCTTATGTTTGTATGTCTaGAGCTTAAACTATAGATTCCTCTGGTTGTGGGTG +
Preference number: 3 (lower is better)
Translates to: KLKTQCALCLYV*SLNYRFLWLWV
Trigger: CACCCACAACCAGAGGAATCTATAGTTTAAGCTCCAGACATACAAACATAAGGCACATTGTGTCTTTAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
3UTR-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACACAGTCCTAAAAGCCTaGGAGATTCATTCCATTTCT +
Preference number: 3 (lower is better)
Translates to: QINTIQFQVRRHKERCFNTVLKA*EIHSIS
Trigger: AGAAATGGAATGAATCTCCAAGGCTTTTAGGACTGT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
3UTR CCA 72 bp TCTATATTTGCTTTACAGTTGTATATTGGCTGGGCATaGATGCAAGCGCAGCAAAGACGTTTATTTAAATAT +
Preference number: 3 (lower is better)
Translates to: SIFALQLYIGWA*MQAQQRRLFKY
Trigger: ATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATATAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TCAAGTCCCGACTCTTCCCCTCTCTCCCAAGAACCCAGGCAACGCCCACCCCAAGGAGCTGAAGGAGGATaGAGTCTGAAAGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSPDSSPLSQEPRQRPPQGAEGG*SLKAAH
Trigger: GTGGGCAGCTTTCAGACTCCATCCTCCTTCAGCTCC...TTGGGGTGGGCGTTGCCTGGGTTCTTGGGAGAGAGGGGAAGAGTCGGGACTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR GCA 90 bp TCTTTATCCGCAGAGCTCTGCTCATCATCCGACCTGGCAAACCGCTCCTTATCGAGCCTGGGCGACAACTaGAAGACTCCATCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: SLSAELCSSSDLANRSLSSLGDN*KTPSWS
Trigger: CGACCAGGATGGAGTCTTGCAGTTGTCGCCCAGGCT...CGATAAGGAGCGGTTTGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR TCA 90 bp GGAAGACCTCAGGCTGGCCAGGTTGCTGTGCTGGCGGTTGTTGAACATGTTGCTTGTCAGGGCATTTTCTaGAGTGGAAAGCTGCTCACG +
Preference number: 4 (lower is better)
Translates to: GRPQAGQVAVLAVVEHVACQGIF*SGKLLT
Trigger: CGTGAGCAGCTTTCCACTTCAGAAAATGCCCTGACA...AGCAACATGTTCAACAACCGCCAGCACAGCAACCTGGCCAGCCTGAGGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS-3UTR TCA 90 bp TCAAGTCCCGACTCTTCCCCTCTCTCCCAAGAACCCAGGCAACGCCCACCCCAACTCATGGAAGACTGCTaGCCTTCCTTTTTCACTGTT +
Preference number: 4 (lower is better)
Translates to: SSPDSSPLSQEPRQRPPQLMEDC*PSFFTV
Trigger: AACAGTGAAAAAGGAAGGTCAGCAGTCTTCCATGAG...TTGGGGTGGGCGTTGCCTGGGTTCTTGGGAGAGAGGGGAAGAGTCGGGACTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR CCA 90 bp GGCAAGTCTCTCTTTATCCGCAGAGCTCTGCTCATCATCCGACCTGGCAAACCGTGCAAGACTCCATCCTaGTCGCCGCTTAATAGCCCT +
Preference number: 4 (lower is better)
Translates to: GKSLFIRRALLIIRPGKPCKTPS*SPLNSP
Trigger: AGGGCTATTAAGCGGCGACCAGGATGGAGTCTTGCA...CGGTTTGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAAAGAGAGACTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR TCA 90 bp TCAAGTCCCGACTCTTCCCCTCTCTCCCAAGAACCCAGGCAACGCCCACCCCAAACCCAGCTTTATCACTaGATGTGTTCGATAACAGAC +
Preference number: 4 (lower is better)
Translates to: SSPDSSPLSQEPRQRPPQTQLYH*MCSITD
Trigger: GTCTGTTATCGAACACATTCAGTGATAAAGCTGGGT...TTGGGGTGGGCGTTGCCTGGGTTCTTGGGAGAGAGGGGAAGAGTCGGGACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR TCA 90 bp TCTTCAGAATTTCTTTCCAAAAACAAGCCATACTATCCAAGGCAAACAGTGGATCCCAGAAGCGGCGCCTaGCCGCCGCCTCCGCTACCG +
Preference number: 4 (lower is better)
Translates to: SSEFLSKNKPYYPRQTVDPRSGA*PPPPLP
Trigger: CGGTAGCGGAGGCGGCGGTCAGGCGCCGCTTCTGGG...ATCCACTGTTTGCCTTGGATAGTATGGCTTGTTTTTGGAAAGAAATTCTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCCCAGAAGCGGCGCCTaGCCGCCGCCTCCGCTACCG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTPRSGA*PPPPLP
Trigger: CGGTAGCGGAGGCGGCGGTCAGGCGCCGCTTCTGGG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp TCTTTATCCGCAGAGCTCTGCTCATCATCCGACCTGGCAAACCGCTCCTTATCGTTATCCGCAGAGCTCTaGTCATCATCCGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLSAELCSSSDLANRSLSLSAEL*SSSDLA
Trigger: TGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAA...CGATAAGGAGCGGTTTGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR GCA 90 bp TCCAGGGGTAAATTAGCTGTGGGACCTAGTTGTGGCCTCTGGATTGTGTTGGAGCCACTAGGCAAAACTTaGTTCCCTGGCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SRGKLAVGPSCGLWIVLEPLGKT*FPGQPL
Trigger: CAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGG...CTCCAACACAATCCAGAGGCCACAACTAGGTCCCACAGCTAATTTACCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS-3UTR CCA 90 bp TCTTTATCCGCAGAGCTCTGCTCATCATCCGACCTGGCAAACCGCTCCTTATCGGCTCATCATCCGACCTaGCAAACCGCTCCTTATCGT +
Preference number: 4 (lower is better)
Translates to: SLSAELCSSSDLANRSLSAHHPT*QTAPYR
Trigger: ACGATAAGGAGCGGTTTGCCAGGTCGGATGATGAGC...CGATAAGGAGCGGTTTGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR TCA 90 bp CCTGGCAAGTCTCTCTTTATCCGCAGAGCTCTGCTCATCATCCGACCTGGCAAAATGGCTCCTCCACCTTaGATTCCAGGTCCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: PGKSLFIRRALLIIRPGKMAPPP*IPGPEF
Trigger: AAACTCTGGACCTGGAATTCAAGGTGGAGGAGCCAT...TTTGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAAAGAGAGACTTGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR TCA 90 bp CACCCTCTGCTGTCCGTGTCTGGAATTGTCCTGCAGTCTGTCCAGTCTCAGGAGTTTACACTCCAACAATaGGGATTTTCACTGGGACGG +
Preference number: 4 (lower is better)
Translates to: HPLLSVSGIVLQSVQSQEFTLQQ*GFSLGR
Trigger: CCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAA...CTCCTGAGACTGGACAGACTGCAGGACAATTCCAGACACGGACAGCAGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS-3UTR CCA 90 bp TCCAGGGGTAAATTAGCTGTGGGACCTAGTTGTGGCCTCTGGATTGTGTTGGAGGCTCATCATCCGACCTaGCAAACCGCTCCTTATCGT +
Preference number: 4 (lower is better)
Translates to: SRGKLAVGPSCGLWIVLEAHHPT*QTAPYR
Trigger: ACGATAAGGAGCGGTTTGCCAGGTCGGATGATGAGC...CTCCAACACAATCCAGAGGCCACAACTAGGTCCCACAGCTAATTTACCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS-3UTR CCA 90 bp AATCCAGAAAAGGACATACTGGGGGAAGGCATCCAGATGTGCCCTAGTGGTTTTAGTAGGGGTCCAAGTTaGGGTTGCTCCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: NPEKDILGEGIQMCPSGFSRGPS*GCSLGG
Trigger: CCCACCCAAGGAGCAACCCCAACTTGGACCCCTACT...AAAACCACTAGGGCACATCTGGATGCCTTCCCCCAGTATGTCCTTTTCTGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR CCA 90 bp GGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATTGGAAGACCTCAGGCTaGCCAGGTTGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GESTKSSSNPALSLNVFDWKTSG*PGCCAG
Trigger: GCCAGCACAGCAACCTGGCCAGCCTGAGGTCTTCCA...ATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CACCCTCTGCTGTCCGTGTCTGGAATTGTCCTGCAGTCTGTCCAGTCTCAGGAGGGTGATCCACAAAAGTaGAGATACCCTCAATGTTGT +
Preference number: 4 (lower is better)
Translates to: HPLLSVSGIVLQSVQSQEGDPQK*RYPQCC
Trigger: ACAACATTGAGGGTATCTTCACTTTTGTGGATCACC...CTCCTGAGACTGGACAGACTGCAGGACAATTCCAGACACGGACAGCAGAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS-3UTR TCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACCTGGGCAGAAAAGCCTaGGCGGGTAGTAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDLGRKA*AGSRGP
Trigger: TGGACCCCTACTACCCGCTCAGGCTTTTCTGCCCAG...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp CACCCTCTGCTGTCCGTGTCTGGAATTGTCCTGCAGTCTGTCCAGTCTCAGGAGTGTGAGAAACTGCCATaGGTAAGATGGTTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: HPLLSVSGIVLQSVQSQECEKLP*VRWLAC
Trigger: ACAAGCTAACCATCTTACGCATGGCAGTTTCTCACA...CTCCTGAGACTGGACAGACTGCAGGACAATTCCAGACACGGACAGCAGAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS-3UTR GCA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAAAGCAGCACCAGGCGATaGAGTTGGGGCACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQSSTRR*SWGTRE
Trigger: CTCCCTGGTGCCCCAACTGCATCGCCTGGTGCTGCT...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAAGCAGCACCAGGCGATaGAGTTGGGGCACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPSSTRR*SWGTRE
Trigger: CTCCCTGGTGCCCCAACTGCATCGCCTGGTGCTGCT...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGGACACCCACACCCTCTaGTGTCCGTGTCTGGAATTG +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLDTHTL*CPCLEL
Trigger: CAATTCCAGACACGGACAGCAGAGGGTGTGGGTGTC...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TTTCACTGTGATTTTCCCTGGCAAGTCTCTCTTTATCCGCAGAGCTCTGCTCATCTGAGGCAGGAGAATTaGTGGAACCCGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FHCDFPWQVSLYPQSSAHLRQEN*WNPGGG
Trigger: TCCACCTCCCGGGTTCCAGCAATTCTCCTGCCTCAG...ATGAGCAGAGCTCTGCGGATAAAGAGAGACTTGCCAGGGAAAATCACAGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR CCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACTCCCTGGCCAGCCTCTaGGTCATCATCTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDSLASL*VIIWEG
Trigger: TCCCTCCCAGATGATGACCCAGAGGCTGGCCAGGGA...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AATCCAGAAAAGGACATACTGGGGGAAGGCATCCAGATGTGCCCTAGTGGTTTTCTGATGGCTGGACAATaGTTACAGGAGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: NPEKDILGEGIQMCPSGFLMAGQ*LQEGLG
Trigger: GCCTAGCCCCTCCTGTAACCATTGTCCAGCCATCAG...AAAACCACTAGGGCACATCTGGATGCCTTCCCCCAGTATGTCCTTTTCTGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR CCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACCTCCTTGGGTGGGGTTaGAGTGGCGGGAAATCTGGG +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDLLGWG*SGGKSG
Trigger: CCCAGATTTCCCGCCACTCCAACCCCACCCAAGGAG...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCGTGACCCTGTTGAGATaGGTGTCCAGGCCCCATCTA +
Preference number: 4 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSVTLLR*VSRPHL
Trigger: TAGATGGGGCCTGGACACCCATCTCAACAGGGTCAC...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CAAGTCTCTCTTTATCCGCAGAGCTCTGCTCATCATCCGACCTGGCAAACCGCTCGTTCAATTTCACTGTaGTTTTCCCTGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: QVSLYPQSSAHHPTWQTARSISL*FSLASL
Trigger: GAGACTTGCCAGGGAAAATCACAGTGAAATTGAACG...AGCGGTTTGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAAAGAGAGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR GCA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGTGGGAGGGAAACACCTaGTGGGGGCCAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPWEGNT*WGPGLD
Trigger: ATCAAGGCCTGGCCCCCAGCAGGTGTTTCCCTCCCA...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp ATCATCCGACCTGGCAAACCGCTCCTTATCGTTAGACATCTGATCATCATCACACCAAGATCGCACCATTaGACTCAAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: IIRPGKPLLIVRHLIIITPRSHH*TQAWAT
Trigger: TGTCGCCCAGGCTTGAGTGCAATGGTGCGATCTTGG...TGTGATGATGATCAGATGTCTAACGATAAGGAGCGGTTTGCCAGGTCGGATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR CCA 90 bp ACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACGCTGTTGCTGCTGCCTaGGTGCCAGCTGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TLQEGFVFGLHSNNEDFHAVAAA*VPAVLS
Trigger: GCTCAGGACAGCTGGCACCCAGGCAGCAGCAACAGC...GTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGTGGCAGGGACAGTGCTaGAGGAGATGCCTTTACTCT +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLWQGQC*RRCLYS
Trigger: AGAGTAAAGGCATCTCCTCCAGCACTGTCCCTGCCA...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp GGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATGAGTGGCGGGAAATCTaGGCCAACATCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GESTKSSSNPALSLNVFDEWREI*ANICPA
Trigger: TGCAGGACAGATGTTGGCCCAGATTTCCCGCCACTC...ATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp ATCTTTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTGGGTTGCTCCTTGGGTaGGGTTGGAGTGGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: IFMAKSRVPESVYLASLFGLLLG*GWSGGK
Trigger: TTTCCCGCCACTCCAACCCCACCCAAGGAGCAACCC...AAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATGGGTAGCCACCTGCTaGGCAGAAAAGCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQWVATC*AEKPER
Trigger: CCGCTCAGGCTTTTCTGCCCAGCAGGTGGCTACCCA...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTTGGAAGACCTCAGGCTaGCCAGGTTGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTWKTSG*PGCCAG
Trigger: GCCAGCACAGCAACCTGGCCAGCCTGAGGTCTTCCA...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TACCTGAGGAAGGTAAAGGGTGAGGGTAGTAACCTGTATCCGCATTTATATGGCGTGACCCTGTTGAGATaGGTGTCCAGGCCCCATCTA +
Preference number: 4 (lower is better)
Translates to: YLRKVKGEGSNLYPHLYGVTLLR*VSRPHL
Trigger: TAGATGGGGCCTGGACACCCATCTCAACAGGGTCAC...GCCATATAAATGCGGATACAGGTTACTACCCTCACCCTTTACCTTCCTCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ATCCGACCTGGCAAACCGCTCCTTATCGTTAGACATCTGATCATCATCACACCTCATTGCACTCAAGCCTaGGCGACAACTGCAAGACTC +
Preference number: 4 (lower is better)
Translates to: IRPGKPLLIVRHLIIITPHCTQA*ATTARL
Trigger: GAGTCTTGCAGTTGTCGCCCAGGCTTGAGTGCAATG...AGGTGTGATGATGATCAGATGTCTAACGATAAGGAGCGGTTTGCCAGGTCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR TCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGGGTGGGTACCATATCTaGCAGTTCTGTGATGTAGGC +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLGGYHI*QFCDVG
Trigger: GCCTACATCACAGAACTGTCAGATATGGTACCCACC...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGTGTCAGGGCATTTTCTaGAGTGGAAAGCTGCTCACG +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLCQGIF*SGKLLT
Trigger: CGTGAGCAGCTTTCCACTTCAGAAAATGCCCTGACA...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTGAGGGGCTAGGCCACTaGAATTCTCTGCCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDIEGLGH*NSLPAG
Trigger: CCCGGCCGGCAGAGAATTTCAGTGGCCTAGCCCCTC...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354396.6
CDS-3UTR TCA 90 bp CCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCTGGGCAGAAAAGCCTaGGCGGGTAGTAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PMLKLAKAPYIPTMFHGPLGRKA*AGSRGP
Trigger: TGGACCCCTACTACCCGCTCAGGCTTTTCTGCCCAG...AGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR TCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGGAGGGACATGGAGCTaGAGGAGGATGGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDGGTWS*RRMESE
Trigger: TTCAGACTCCATCCTCCTTCAGCTCCATGTCCCTCC...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp TTGTATGTCTGGAGCTTAAACTATAGATTCCTCTGGTTGTGGGTGCCTGTTGTTGTTTGCTGTTGCTGCTaGCTGGGTGCCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LYVWSLNYRFLWLWVPVVVCCCC*LGASCP
Trigger: AGGACAGCTGGCACCCAGGCAGCAGCAACAGCAAAC...AACAACAGGCACCCACAACCAGAGGAATCTATAGTTTAAGCTCCAGACATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR GCA 90 bp CCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTGCCTGGGTAGCCACCTaGTGGGCAGAAAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PMLKLAKAPYIPTMFHGPAWVAT*WAEKPE
Trigger: CTCAGGCTTTTCTGCCCAGCAGGTGGCTACCCAGGC...AGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp CACTGTGATTTTCCCTGGCAAGTCTCTCTTTATCCGCAGAGCTCTGCTCATCATAGTTTCCAGAGGCAATaGCTGGACCCAGTGATGGTA +
Preference number: 4 (lower is better)
Translates to: HCDFPWQVSLYPQSSAHHSFQRQ*LDPVMV
Trigger: TACCATCACTGGGTCCAGCCATTGCCTCTGGAAACT...ATGATGAGCAGAGCTCTGCGGATAAAGAGAGACTTGCCAGGGAAAATCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR CCA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCCCAGGGCACTACAGGTaGGTACCATATCTGACAGTT +
Preference number: 4 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSPGHYR*VPYLTV
Trigger: AACTGTCAGATATGGTACCCACCTGTAGTGCCCTGG...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCCCTGCAATCTGCCAATaGCCACTAGGCAAAACTTGC +
Preference number: 4 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSPAICQ*PLGKTC
Trigger: GCAAGTTTTGCCTAGTGGCCATTGGCAGATTGCAGG...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCATCCAGAGCCATTCTTaGTTCTTAGACCGGAACCGG +
Preference number: 4 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSIQSHS*FLDRNR
Trigger: CCGGTTCCGGTCTAAGAACCAAGAATGGCTCTGGAT...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR CCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACGCTGTTGCTGCTGCCTaGGTGCCAGCTGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYAVAAA*VPAVLS
Trigger: GCTCAGGACAGCTGGCACCCAGGCAGCAGCAACAGC...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp GGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATGGGAATGTGTTGCCCTaGGAGAATAGCTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GESTKSSSNPALSLNVFDGNVLP*ENSCWV
Trigger: CACCCAACAGCTATTCTCCCAGGGCAACACATTCCC...ATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTTGGGTGGGGTTGGAGTaGCGGGAAATCTGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSWVGLE*REIWAN
Trigger: GTTGGCCCAGATTTCCCGCCACTCCAACCCCACCCA...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGGGTTGCTCCTTGGGTaGGGTTGGAGTGGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNGLLLG*GWSGGK
Trigger: TTTCCCGCCACTCCAACCCCACCCAAGGAGCAACCC...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGAGTAGGGGTCCAAGTTaGGGTTGCTCCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWSRGPS*GCSLGG
Trigger: CCCACCCAAGGAGCAACCCCAACTTGGACCCCTACT...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGTCTGATCTCCCAGCATaGACAGCATCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLSDLPA*TASPGR
Trigger: TCTTCCAGGAGATGCTGTCCATGCTGGGAGATCAGA...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TACCTGAGGAAGGTAAAGGGTGAGGGTAGTAACCTGTATCCGCATTTATATGGCGGAGAGTGTAGGCCGTaGTTCTTGGCTAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: YLRKVKGEGSNLYPHLYGGECRP*FLARVP
Trigger: AGGAACTCTAGCCAAGAACCACGGCCTACACTCTCC...GCCATATAAATGCGGATACAGGTTACTACCCTCACCCTTTACCTTCCTCAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS-3UTR TCA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAAACCGGAACCGGAACATaGCAGACAGCACTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQTGTGT*QTALGL
Trigger: AAGGCCAAGTGCTGTCTGTCATGTTCCGGTTCCGGT...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR TCA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGGGAGGGACATGGAGCTaGAGGAGGATGGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPGGTWS*RRMESE
Trigger: TTCAGACTCCATCCTCCTTCAGCTCCATGTCCCTCC...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR TCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGATCTTCCAGATAAGGTaGGAGCACCAAAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLIFQIR*EHQKQQ
Trigger: CTGCTGCTTTTGGTGCTCTCACCTTATCTGGAAGAT...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGACACATACACCACCCTaGCTGTCTCACATGAGACAA +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLTHTPP*LSHMRQ
Trigger: TTGTCTCATGTGAGACAGGCAGGGTGGTGTATGTGT...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTGCCTGGGTAGCCACCTaGTGGGCAGAAAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCAWVAT*WAEKPE
Trigger: CTCAGGCTTTTCTGCCCAGCAGGTGGCTACCCAGGC...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCAGCAGCACCAGGCGATaGAGTTGGGGCACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTSSTRR*SWGTRE
Trigger: CTCCCTGGTGCCCCAACTGCATCGCCTGGTGCTGCT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR GCA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCACTTCAAGGCCACCCTTaGTCCTCAGTCCCCTATGAC +
Preference number: 4 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPLQGHP*SSVPYD
Trigger: GTCATAGGGGACTGAGGAGCAAGGGTGGCCTTGAAG...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGGAAGGCATCCAGATGTaGCCTAGTGGTTTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLEGIQM*PSGFQV
Trigger: GACTTGAAAACCACTAGGGCACATCTGGATGCCTTC...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR CCA 90 bp GGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATTATAGGAGCCATCAGTaGATGTGTTGCCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: GESTKSSSNPALSLNVFDYRSHQ*MCCQFP
Trigger: GGGGAACTGGCAACACATCCACTGATGGCTCCTATA...ATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTCTCTGGGTCATCATCTaGGAGGGAAACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTLWVII*EGNTCW
Trigger: CCAGCAGGTGTTTCCCTCCCAGATGATGACCCAGAG...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCTCCCTGGCCAGCCTCTaGGTCATCATCTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LNVFDNRQSYQQPTFYICSLASL*VIIWEG
Trigger: TCCCTCCCAGATGATGACCCAGAGGCTGGCCAGGGA...GCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCCCTAGTTGTGGCCTCTaGATTGTGTTGGAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSPSCGL*IVLESV
Trigger: TACACTCTCCAACACAATCCAGAGGCCACAACTAGG...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp GGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATGGGAATGATTGTAGCTaGCCAGTCCATCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GESTKSSSNPALSLNVFDGNDCS*PVHLFL
Trigger: CAGGAAGAGATGGACTGGCCAGCTACAATCATTCCC...ATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACTGGGTAGCCACCTGCTaGGCAGAAAAGCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYWVATC*AEKPER
Trigger: CCGCTCAGGCTTTTCTGCCCAGCAGGTGGCTACCCA...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGAAATGGACATTCCTTTaGCCTCTTCAAGGCCACCCT +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLKWTFL*PLQGHP
Trigger: AGGGTGGCCTTGAAGAGGCCAAAGGAATGTCCATTT...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CTTTATCCGCAGAGCTCTGCTCATCATCCGACCTGGCAAACCGCTCCTTATCGTTTATCGTTAGACATCTaGTCATCATCACACCTCAAA +
Preference number: 4 (lower is better)
Translates to: LYPQSSAHHPTWQTAPYRLSLDI*SSSHLK
Trigger: TTTGAGGTGTGATGATGATCAGATGTCTAACGATAA...ACGATAAGGAGCGGTTTGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR TCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACTGTCAGGGCATTTTCTaGAGTGGAAAGCTGCTCACG +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDCQGIF*SGKLLT
Trigger: CGTGAGCAGCTTTCCACTTCAGAAAATGCCCTGACA...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCATGGACCACCACGAAGTaGGGTTCCCCATCCTTTACA +
Preference number: 4 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPWTTTK*GSPSFT
Trigger: TGTAAAGGATGGGGAACCTCACTTCGTGGTGGTCCA...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGTGTTGTGTCGGGAGATaGACTCTGTTGGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLCCVGR*TLLVDK
Trigger: TTTGTCAACCAACAGAGTTCATCTCCCGACACAACA...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AATCCAGAAAAGGACATACTGGGGGAAGGCATCCAGATGTGCCCTAGTGGTTTTTGTTGTGTCGGGAGATaGACTCTGTTGGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: NPEKDILGEGIQMCPSGFCCVGR*TLLVDK
Trigger: TTTGTCAACCAACAGAGTTCATCTCCCGACACAACA...AAAACCACTAGGGCACATCTGGATGCCTTCCCCCAGTATGTCCTTTTCTGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR TCA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTACCGGAACCGGAACATaGCAGACAGCACTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSTGTGT*QTALGL
Trigger: AAGGCCAAGTGCTGTCTGTCATGTTCCGGTTCCGGT...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR TCA 90 bp TTGTATGTCTGGAGCTTAAACTATAGATTCCTCTGGTTGTGGGTGCCTGTTGTTCTGTCCTGCAGAAGCTaGTGGCTGGACAATGGTTAC +
Preference number: 4 (lower is better)
Translates to: LYVWSLNYRFLWLWVPVVLSCRS*WLDNGY
Trigger: GTAACCATTGTCCAGCCATCAGCTTCTGCAGGACAG...AACAACAGGCACCCACAACCAGAGGAATCTATAGTTTAAGCTCCAGACATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCTGGGCAGAAAAGCCTaGGCGGGTAGTAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTLGRKA*AGSRGP
Trigger: TGGACCCCTACTACCCGCTCAGGCTTTTCTGCCCAG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR TCA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAAAAGGAGGATGGAGTCTaGAAGCTGCCCACACCAAAC +
Preference number: 4 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQKEDGV*KLPTPN
Trigger: GTTTGGTGTGGGCAGCTTTCAGACTCCATCCTCCTT...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp ATCTTTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTTTATCCGCAGAGCTCTaGTCATCATCCGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: IFMAKSRVPESVYLASLFLSAEL*SSSDLA
Trigger: TGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAA...AAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGTTATCCGCAGAGCTCTaGTCATCATCCGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPLSAEL*SSSDLA
Trigger: TGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAA...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAAGGTCCACAGAGCTACTaGCACACCTCATTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQGPQSY*HTSFGK
Trigger: TTTGCCGAATGAGGTGTGGCAGTAGCTCTGTGGACC...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGGGTCCACAGAGCTACTaGCACACCTCATTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWGPQSY*HTSFGK
Trigger: TTTGCCGAATGAGGTGTGGCAGTAGCTCTGTGGACC...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTGGGAGGGAAACACCTaGTGGGGGCCAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTWEGNT*WGPGLD
Trigger: ATCAAGGCCTGGCCCCCAGCAGGTGTTTCCCTCCCA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp GGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATGGAGAACTAGTTACCTaGAATCTGCCAATGGCCACT +
Preference number: 4 (lower is better)
Translates to: GESTKSSSNPALSLNVFDGELVT*NLPMAT
Trigger: AGTGGCCATTGGCAGATTGCAGGTAACTAGTTCTCC...ATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACGTTTGCTGTTGCTGCTaGCTGGGTGCCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYVCCCC*LGASCP
Trigger: AGGACAGCTGGCACCCAGGCAGCAGCAACAGCAAAC...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTGGGTGGCAGGGACAGTaGTGGAGGAGATGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCGWQGQ*WRRCLY
Trigger: GTAAAGGCATCTCCTCCAGCACTGTCCCTGCCACCC...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTGGTCCAAGTTGGGGTTaGTCCTTGGGTGGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCGPSWG*SLGGVG
Trigger: TCCAACCCCACCCAAGGAGCAACCCCAACTTGGACC...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGCCTGGGTAGCCACCTaGTGGGCAGAAAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTAWVAT*WAEKPE
Trigger: CTCAGGCTTTTCTGCCCAGCAGGTGGCTACCCAGGC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR GCA 90 bp ACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACGACACCCACACCCTCTaGTGTCCGTGTCTGGAATTG +
Preference number: 4 (lower is better)
Translates to: TLQEGFVFGLHSNNEDFHDTHTL*CPCLEL
Trigger: CAATTCCAGACACGGACAGCAGAGGGTGTGGGTGTC...GTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCTGGCCAGGTTGCTGTaGTGGCGGTTGTTGAACATG +
Preference number: 4 (lower is better)
Translates to: PMLKLAKAPYIPTMFHGPLARLL*WRLLNM
Trigger: CATGTTCAACAACCGCCAGCACAGCAACCTGGCCAG...AGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACAGTTTCCAGAGGCAATaGCTGGACCCAGTGATGGTA +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDSFQRQ*LDPVMV
Trigger: TACCATCACTGGGTCCAGCCATTGCCTCTGGAAACT...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CACTGTGATTTTCCCTGGCAAGTCTCTCTTTATCCGCAGAGCTCTGCTCATCATCACTGTGATTTTCCCTaGCAAGTCTCTCTTTATCCG +
Preference number: 4 (lower is better)
Translates to: HCDFPWQVSLYPQSSAHHHCDFP*QVSLYP
Trigger: CGGATAAAGAGAGACTTGCCAGGGAAAATCACAGTG...ATGATGAGCAGAGCTCTGCGGATAAAGAGAGACTTGCCAGGGAAAATCACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR CCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGGGGCATTTTCTGAAGTaGAAAGCTGCTCACGAAGTT +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLGHFLK*KAAHEV
Trigger: AACTTCGTGAGCAGCTTTCCACTTCAGAAAATGCCC...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCCTCTGGGTCATCATCTaGGAGGGAAACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSLWVII*EGNTCW
Trigger: CCAGCAGGTGTTTCCCTCCCAGATGATGACCCAGAG...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGCTGTTGCTGCTGCCTaGGTGCCAGCTGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNAVAAA*VPAVLS
Trigger: GCTCAGGACAGCTGGCACCCAGGCAGCAGCAACAGC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTGGGTGGGGTTGGAGTaGCGGGAAATCTGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDIWVGLE*REIWAN
Trigger: GTTGGCCCAGATTTCCCGCCACTCCAACCCCACCCA...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp ATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCCTCCTTGGGTGGGGTTaGAGTGGCGGGAAATCTGGG +
Preference number: 4 (lower is better)
Translates to: IYTYNVSWSSNMRTFLLSLLGWG*SGGKSG
Trigger: CCCAGATTTCCCGCCACTCCAACCCCACCCAAGGAG...GGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCTCCTTGGGTGGGGTTaGAGTGGCGGGAAATCTGGG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTLLGWG*SGGKSG
Trigger: CCCAGATTTCCCGCCACTCCAACCCCACCCAAGGAG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTGTCTTAGCAGTAGCCTaGGTAGCCACCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCVLAVA*VATCWA
Trigger: TGCCCAGCAGGTGGCTACCCAGGCTACTGCTAAGAC...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACCTGCCCACACCAAACTaGGAAGTACGAGTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDLPTPN*EVRVLA
Trigger: TGCTAAGACTCGTACTTCCCAGTTTGGTGTGGGCAG...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTGGAGCTGAAGGAGGATaGAGTCTGAAAGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSGAEGG*SLKAAH
Trigger: GTGGGCAGCTTTCAGACTCCATCCTCCTTCAGCTCC...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp TGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCTTTACAGTGGAAGACCTCAGGCTaGCCAGGTTGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: CSITDNRINSRLSIFALQWKTSG*PGCCAG
Trigger: GCCAGCACAGCAACCTGGCCAGCCTGAGGTCTTCCA...CTGTAAAGCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTGGAAGACCTCAGGCTaGCCAGGTTGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTWKTSG*PGCCAG
Trigger: GCCAGCACAGCAACCTGGCCAGCCTGAGGTCTTCCA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGTTTTACTCCACTACCTaGCACCAGACTGGAGACATA +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLFYSTT*HQTGDI
Trigger: TATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAA...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTCCCTGGCCAGCCTCTaGGTCATCATCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNSLASL*VIICWG
Trigger: CCCCCAGCAGATGATGACCCAGAGGCTGGCCAGGGA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515192.5
CDS-3UTR TCA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAATGGCTCCTCCACCTTaGATTCCAGGTCCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPMAPPP*IPGPEF
Trigger: AAACTCTGGACCTGGAATTCAAGGTGGAGGAGCCAT...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCGCAAGGACTTCATGTaGGAAACTGCCATGCGTAAG +
Preference number: 4 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWRKDFM*ETAMRK
Trigger: CTTACGCATGGCAGTTTCTCACATGAAGTCCTTGCG...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTAGCCACACAGCGGTaGTCCACAAAAGTGAAGATA +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDVATQR*STKVKI
Trigger: TATCTTCACTTTTGTGGATCACCGCTGTGTGGCTAC...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCCTGTCCTGCAGAAGCTaGTGGCTGGACAATGGTTAC +
Preference number: 4 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSLSCRS*WLDNGY
Trigger: GTAACCATTGTCCAGCCATCAGCTTCTGCAGGACAG...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR TCA 90 bp GGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATTTTACACTCCAACAATaGGGATTTTCACTGGGACGG +
Preference number: 4 (lower is better)
Translates to: GESTKSSSNPALSLNVFDFTLQQ*GFSLGR
Trigger: CCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAA...ATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGCTAAACTGGGTATTTTaGGTATGGGATGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLLNWVF*VWDERG
Trigger: GCCTCTTTCATCCCATACTCAAAATACCCAGTTTAG...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTGGGAGGGAAACACCTaGTGGGGGCCAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNWEGNT*WGPGLD
Trigger: ATCAAGGCCTGGCCCCCAGCAGGTGTTTCCCTCCCA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACCCACTAGGCAAAACTTaGTTCCCTGGCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LLKPHIYLQCFMVLKYEDPLGKT*FPGQPL
Trigger: CAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGG...GTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTCCACTAGGCAAAACTTaGTTCCCTGGCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCPLGKT*FPGQPL
Trigger: CAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGG...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAAGAACTTCTCAAGGGGCTTaGTGTGTTCTGGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: YLVYTPTMRIFTGTANPRTSQGA*CVLVLW
Trigger: CCACAGGACCAGAACACAGCAAGCCCCTTGAGAAGT...TCTTGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGGTCCAAGTTGGGGTTaGTCCTTGGGTGGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTGPSWG*SLGGVG
Trigger: TCCAACCCCACCCAAGGAGCAACCCCAACTTGGACC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR GCA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAAATGGAGTCTGAAAGCTaGCCACACCAAACTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQMESES*PHQTGK
Trigger: CTTCCCAGTTTGGTGTGGGCAGCTTTCAGACTCCAT...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATGTCTGGAATTGTCCTaGAGTCTGTCCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQCLELS*SLSSLR
Trigger: CCTGAGACTGGACAGACTGCAGGACAATTCCAGACA...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGTGTCTGGAATTGTCCTaGAGTCTGTCCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWCLELS*SLSSLR
Trigger: CCTGAGACTGGACAGACTGCAGGACAATTCCAGACA...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTCTGGCCAGGTTGCTGTaGTGGCGGTTGTTGAACATG +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCLARLL*WRLLNM
Trigger: CATGTTCAACAACCGCCAGCACAGCAACCTGGCCAG...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp ACCTGTATCCGCATTTATATGGCTATTGTTAATTACCAAGTGACCCTGTTGAGACTTCAAGGCCACCCTTaGTCCTCAGTCCCCTATGAC +
Preference number: 4 (lower is better)
Translates to: TCIRIYMAIVNYQVTLLRLQGHP*SSVPYD
Trigger: GTCATAGGGGACTGAGGAGCAAGGGTGGCCTTGAAG...TCTCAACAGGGTCACTTGGTAATTAACAATAGCCATATAAATGCGGATACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ATCTTTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTCCAGGGCACTACAGGTaGGTACCATATCTGACAGTT +
Preference number: 4 (lower is better)
Translates to: IFMAKSRVPESVYLASLFPGHYR*VPYLTV
Trigger: AACTGTCAGATATGGTACCCACCTGTAGTGCCCTGG...AAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AATCCAGAAAAGGACATACTGGGGGAAGGCATCCAGATGTGCCCTAGTGGTTTTTTTATCCACATCATCTaGGTGCACCTGATCATAGAG +
Preference number: 4 (lower is better)
Translates to: NPEKDILGEGIQMCPSGFFIHII*VHLIIE
Trigger: CTCTATGATCAGGTGCACCCAGATGATGTGGATAAA...AAAACCACTAGGGCACATCTGGATGCCTTCCCCCAGTATGTCCTTTTCTGGATT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR CCA 90 bp TATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAAGACAAAACTTGCTTCCCTaGCCAGCCTCTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: YLVYTPTMRIFTGTANPRQNLLP*PASGSS
Trigger: TGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTG...TCTTGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGGGAGAGTGTAGGCCGTaGTTCTTGGCTAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPGECRP*FLARVL
Trigger: AAGAACTCTAGCCAAGAACCACGGCCTACACTCTCC...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACCCTAGTTGTGGCCTCTaGATTGTGTTGGAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDPSCGL*IVLESV
Trigger: TACACTCTCCAACACAATCCAGAGGCCACAACTAGG...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TTGTATGTCTGGAGCTTAAACTATAGATTCCTCTGGTTGTGGGTGCCTGTTGTTGGGAATGATTGTAGCTaGCCAGTCCATCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LYVWSLNYRFLWLWVPVVGNDCS*PVHLFL
Trigger: CAGGAAGAGATGGACTGGCCAGCTACAATCATTCCC...AACAACAGGCACCCACAACCAGAGGAATCTATAGTTTAAGCTCCAGACATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR CCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTCTGATGGCTGGACAATaGTTACAGGAGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCLMAGQ*LQEGLG
Trigger: GCCTAGCCCCTCCTGTAACCATTGTCCAGCCATCAG...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTGGGTGGGGTTGGAGTaGCGGGAAATCTGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNWVGLE*REIWAN
Trigger: GTTGGCCCAGATTTCCCGCCACTCCAACCCCACCCA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGGGTTGCTCCTTGGGTaGGGTTGGAGTGGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNGLLLG*GWSGGK
Trigger: TTTCCCGCCACTCCAACCCCACCCAAGGAGCAACCC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTGGGTAGCCACCTGCTaGGCAGAAAAGCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNWVATC*AEKPER
Trigger: CCGCTCAGGCTTTTCTGCCCAGCAGGTGGCTACCCA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp ATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCGTCTTAGCAGTAGCCTaGGTAGCCACCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: IYTYNVSWSSNMRTFLLSVLAVA*VATCWA
Trigger: TGCCCAGCAGGTGGCTACCCAGGCTACTGCTAAGAC...GGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGTCTTAGCAGTAGCCTaGGTAGCCACCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTVLAVA*VATCWA
Trigger: TGCCCAGCAGGTGGCTACCCAGGCTACTGCTAAGAC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATCTGCTGTCCGTGTCTaGAATTGTCCTGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQSAVRV*NCPAVC
Trigger: ACAGACTGCAGGACAATTCCAGACACGGACAGCAGA...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGTCTGCTGTCCGTGTCTaGAATTGTCCTGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWSAVRV*NCPAVC
Trigger: ACAGACTGCAGGACAATTCCAGACACGGACAGCAGA...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAAGAGCCAGGTTGCTGTGCTaGCGGTTGTTGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: YLVYTPTMRIFTGTANPRARLLC*RLLNML
Trigger: CAACATGTTCAACAACCGCCAGCACAGCAACCTGGC...TCTTGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAAATGGACAGCATCTCCTaGAAGACCTCAGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSNPALSLNVFDNRQSYQMDSIS*KTSGWP
Trigger: TGGCCAGCCTGAGGTCTTCCAGGAGATGCTGTCCAT...TTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTATGGACAGCATCTCCTaGAAGACCTCAGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCMDSIS*KTSGWP
Trigger: TGGCCAGCCTGAGGTCTTCCAGGAGATGCTGTCCAT...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTCAGTTGTATATTGGCTaGGCATGGATGCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTQLYIG*AWMQAQ
Trigger: CTGCGCTTGCATCCATGCCCAGCCAATATACAACTG...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGTTTACAGTTGTATATTaGCTGGGCATGGATGCAAGC +
Preference number: 4 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLFTVVY*LGMDAS
Trigger: GCTTGCATCCATGCCCAGCCAATATACAACTGTAAA...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACTACCTGGCACCAGACTaGAGACATAAGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDYLAPD*RHKEGK
Trigger: TTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTA...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTGTAGGCCGTGGTTCTTaGCTAGAGTTCCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTVGRGS*LEFLLE
Trigger: TTCCAACAGGAACTCTAGCCAAGAACCACGGCCTAC...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS-3UTR TCA 90 bp ACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACATGGCTCCTCCACCTTaGATTCCAGGTCCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: TLQEGFVFGLHSNNEDFHMAPPP*IPGPEF
Trigger: AAACTCTGGACCTGGAATTCAAGGTGGAGGAGCCAT...GTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TACCTGAGGAAGGTAAAGGGTGAGGGTAGTAACCTGTATCCGCATTTATATGGCTATCTGACAGTTCTGTaGTGTAGGCTGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: YLRKVKGEGSNLYPHLYGYLTVL*CRLSSC
Trigger: ACAAGATGACAGCCTACATCACAGAACTGTCAGATA...GCCATATAAATGCGGATACAGGTTACTACCCTCACCCTTTACCTTCCTCAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATCGCAAGGACTTCATGTaGGAAACTGCCATGCGTAAG +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNRKDFM*ETAMRK
Trigger: CTTACGCATGGCAGTTTCTCACATGAAGTCCTTGCG...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGTCAGTTCCTGATCAGTaGGGAAAGACGGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPSVPDQ*GKTAYR
Trigger: CCTATAAGCCGTCTTTCCTCACTGATCAGGAACTGA...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACTGGACCACCACGAAGTaGGGTTCCCCATCCTTTACA +
Preference number: 4 (lower is better)
Translates to: LLKPHIYLQCFMVLKYEDWTTTK*GSPSFT
Trigger: TGTAAAGGATGGGGAACCTCACTTCGTGGTGGTCCA...GTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACTGGACCACCACGAAGTaGGGTTCCCCATCCTTTACA +
Preference number: 4 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYWTTTK*GSPSFT
Trigger: TGTAAAGGATGGGGAACCTCACTTCGTGGTGGTCCA...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGGAGGGACATGGAGCTaGAGGAGGATGGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTGGTWS*RRMESE
Trigger: TTCAGACTCCATCCTCCTTCAGCTCCATGTCCCTCC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR TCA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGTTGCTCACTAGAACTTaGACGATGATGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWLLTRT*TMMRLL
Trigger: CAGCAGCCTCATCATCGTTCAAGTTCTAGTGAGCAA...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTATCCGCAGAGCTCTaGTCATCATCCGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCLSAEL*SSSDLA
Trigger: TGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAA...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp ACCTGTATCCGCATTTATATGGCTATTGTTAATTACCAAGTGACCCTGTTGAGACATCAGTGGATGTGTTaGCAGTTCCCCGCAAGGACT +
Preference number: 4 (lower is better)
Translates to: TCIRIYMAIVNYQVTLLRHQWMC*QFPART
Trigger: AGTCCTTGCGGGGAACTGGCAACACATCCACTGATG...TCTCAACAGGGTCACTTGGTAATTAACAATAGCCATATAAATGCGGATACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGATCATAGAGTGTGCTaGCAAACCATTCAGACTGTG +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDDHRVC*QTIQTV
Trigger: CACAGTCTGAATGGTTTGGCAGCACACTCTATGATC...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp ATCTTTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGCCAAGTCCATTCCTaGATCTGTTCCTCACAAAGC +
Preference number: 4 (lower is better)
Translates to: IFMAKSRVPESVYLASLFSQVHS*ICSSQS
Trigger: GCTTTGTGAGGAACAGATGCAGGAATGGACTTGGCT...AAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCCACTAGGCAAAACTTaGTTCCCTGGCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTPLGKT*FPGQPL
Trigger: CAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGTTTGCTGTTGCTGCTaGCTGGGTGCCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNVCCCC*LGASCP
Trigger: AGGACAGCTGGCACCCAGGCAGCAGCAACAGCAAAC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR GCA 90 bp ACCTGTATCCGCATTTATATGGCTATTGTTAATTACCAAGTGACCCTGTTGAGAACTTCTCAAGGGGCTTaGTGTGTTCTGGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TCIRIYMAIVNYQVTLLRTSQGA*CVLVLW
Trigger: CCACAGGACCAGAACACAGCAAGCCCCTTGAGAAGT...TCTCAACAGGGTCACTTGGTAATTAACAATAGCCATATAAATGCGGATACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR GCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATCAGTGCTGGAGGAGATaGCTTTACTCTGATCCGCAT +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNQCWRR*LYSDPH
Trigger: ATGCGGATCAGAGTAAAGGCATCTCCTCCAGCACTG...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGGGTGGCAGGGACAGTaGTGGAGGAGATGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNGWQGQ*WRRCLY
Trigger: GTAAAGGCATCTCCTCCAGCACTGTCCCTGCCACCC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGGTCCAAGTTGGGGTTaGTCCTTGGGTGGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNGPSWG*SLGGVG
Trigger: TCCAACCCCACCCAAGGAGCAACCCCAACTTGGACC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGACACCCACACCCTCTaGTGTCCGTGTCTGGAATTG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTDTHTL*CPCLEL
Trigger: CAATTCCAGACACGGACAGCAGAGGGTGTGGGTGTC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTGGCCAGGTTGCTGTaGTGGCGGTTGTTGAACATG +
Preference number: 4 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLLARLL*WRLLNM
Trigger: CATGTTCAACAACCGCCAGCACAGCAACCTGGCCAG...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGTCTTTCCAGAGGGACTaGTCACAGGCAGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWSFQRD*SQAAKR
Trigger: TCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGA...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTTCCTCTGGTTGTGGGTaGCTGTTGTTTATGAACTGG +
Preference number: 4 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTSSGCG*LLFMNW
Trigger: CCAGTTCATAAACAACAGGCACCCACAACCAGAGGA...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCTCTGGGTCATCATCTaGTGGGGGCCAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNLWVII*WGPGLD
Trigger: ATCAAGGCCTGGCCCCCAGCAGATGATGACCCAGAG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515192.5
CDS-3UTR CCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATAGTTTCCAGAGGCAATaGCTGGACCCAGTGATGGTA +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNSFQRQ*LDPVMV
Trigger: TACCATCACTGGGTCCAGCCATTGCCTCTGGAAACT...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACATCAAAATCCAGCCCTaGTCGCCGCTTAATAGCCCT +
Preference number: 4 (lower is better)
Translates to: TLQEGFVFGLHSNNEDFHIKIQP*SPLNSP
Trigger: AGGGCTATTAAGCGGCGACCAGGGCTGGATTTTGAT...GTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACCACTGTGATTTTCCCTaGCAAGTCTCTCTTTATCCG +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDHCDFP*QVSLYP
Trigger: CGGATAAAGAGAGACTTGCCAGGGAAAATCACAGTG...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACCAAAACTTGCTTCCCTaGCCAGCCTCTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: LLKPHIYLQCFMVLKYEDQNLLP*PASGSS
Trigger: TGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTG...GTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTCCTGCAATCTGCCAATaGCCACTAGGCAAAACTTGC +
Preference number: 4 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSPAICQ*PLGKTC
Trigger: GCAAGTTTTGCCTAGTGGCCATTGGCAGATTGCAGG...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTATCCAGAGCCATTCTTaGTTCTTAGACCGGAACCGG +
Preference number: 4 (lower is better)
Translates to: PMLKLAKAPYIPTMFHGPIQSHS*FLDRNR
Trigger: CCGGTTCCGGTCTAAGAACCAAGAATGGCTCTGGAT...AGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp ATCTTTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTCCTAGTTGTGGCCTCTaGATTGTGTTGGAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: IFMAKSRVPESVYLASLFPSCGL*IVLESV
Trigger: TACACTCTCCAACACAATCCAGAGGCCACAACTAGG...AAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCTGATGGCTGGACAATaGTTACAGGAGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTLMAGQ*LQEGLG
Trigger: GCCTAGCCCCTCCTGTAACCATTGTCCAGCCATCAG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACAGTAGGGGTCCAAGTTaGGGTTGCTCCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNSRGPS*GCSLGG
Trigger: CCCACCCAAGGAGCAACCCCAACTTGGACCCCTACT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGGAGCTGAAGGAGGATaGAGTCTGAAAGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTGAEGG*SLKAAH
Trigger: GTGGGCAGCTTTCAGACTCCATCCTCCTTCAGCTCC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp ACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTCTGCTGTCCGTGTCTaGAATTGTCCTGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TLQEGFVFGLHSNNEDFHSAVRV*NCPAVC
Trigger: ACAGACTGCAGGACAATTCCAGACACGGACAGCAGA...GTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAAGCCAGGTTGCTGTGCTaGCGGTTGTTGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: SSNPALSLNVFDNRQSYQARLLC*RLLNML
Trigger: CAACATGTTCAACAACCGCCAGCACAGCAACCTGGC...TTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCATGGACAGCATCTCCTaGAAGACCTCAGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLMDSIS*KTSGWP
Trigger: TGGCCAGCCTGAGGTCTTCCAGGAGATGCTGTCCAT...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATTCTGATCTCCCAGCATaGACAGCATCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNSDLPA*TASPGR
Trigger: TCTTCCAGGAGATGCTGTCCATGCTGGGAGATCAGA...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGTATATTGGCTGGGCATaGATGCAAGCGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWYIGWA*MQAQQR
Trigger: TCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATA...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ATCTTTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTGCAGCATTATCTTTATaGCCAAGTCTCGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: IFMAKSRVPESVYLASLFAALSL*PSLGFQ
Trigger: CTGGAACCCGAGACTTGGCCATAAAGATAATGCTGC...AAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TCCAGGGGTAAATTAGCTGTGGGACCTAGTTGTGGCCTCTGGATTGTGTTGGAGAAACAAGGGTTCCATTaGAAACTCAACTTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SRGKLAVGPSCGLWIVLEKQGFH*KLNFLV
Trigger: AACCAAAAAGTTGAGTTTCCAATGGAACCCTTGTTT...CTCCAACACAATCCAGAGGCCACAACTAGGTCCCACAGCTAATTTACCCCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS-3UTR CCA 90 bp TTGTATGTCTGGAGCTTAAACTATAGATTCCTCTGGTTGTGGGTGCCTGTTGTTCAGAAAAGGACATACTaGGGGAAGGCATCCAGATGT +
Preference number: 4 (lower is better)
Translates to: LYVWSLNYRFLWLWVPVVQKRTY*GKASRC
Trigger: ACATCTGGATGCCTTCCCCCAGTATGTCCTTTTCTG...AACAACAGGCACCCACAACCAGAGGAATCTATAGTTTAAGCTCCAGACATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358595.10
3UTR CAA 72 bp ACAGCCGACTTTCTATATTTGCTTTACAGTTGTATATaGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTT +
Preference number: 4 (lower is better)
Translates to: TADFLYLLYSCI*AGHGCKRSKDV
Trigger: AACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATATAGAAAGTCGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAAATGGCTCCTCCACCTTaGATTCCAGGTCCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: SSNPALSLNVFDNRQSYQMAPPP*IPGPEF
Trigger: AAACTCTGGACCTGGAATTCAAGGTGGAGGAGCCAT...TTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCCGCAAGGACTTCATGTaGGAAACTGCCATGCGTAAG +
Preference number: 4 (lower is better)
Translates to: LNVFDNRQSYQQPTFYICRKDFM*ETAMRK
Trigger: CTTACGCATGGCAGTTTCTCACATGAAGTCCTTGCG...GCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCTCAGTTCCTGATCAGTaGGGAAAGACGGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSSVPDQ*GKTAYR
Trigger: CCTATAAGCCGTCTTTCCTCACTGATCAGGAACTGA...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGAAATGTTTCAGTTCCTaGTCAGTGAGGAAAGACGGC +
Preference number: 4 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPKCFSS*SVRKDG
Trigger: GCCGTCTTTCCTCACTGATCAGGAACTGAAACATTT...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTCCTGCCTGTCTCACATaGGACAATAAACAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSPACLT*DNKQKA
Trigger: GGCTTTCTGTTTATTGTCTCATGTGAGACAGGCAGG...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCCTGCCTGTCTCACATaGGACAATAAACAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PMLKLAKAPYIPTMFHGPPACLT*DNKQKA
Trigger: GGCTTTCTGTTTATTGTCTCATGTGAGACAGGCAGG...AGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AATCCAGAAAAGGACATACTGGGGGAAGGCATCCAGATGTGCCCTAGTGGTTTTATGAACTCTGTTGGTTaGCAAACATTACTCATGTCT +
Preference number: 4 (lower is better)
Translates to: NPEKDILGEGIQMCPSGFMNSVG*QTLLMS
Trigger: AGACATGAGTAATGTTTGTCAACCAACAGAGTTCAT...AAAACCACTAGGGCACATCTGGATGCCTTCCCCCAGTATGTCCTTTTCTGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR TCA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCGTAGCCACACAGCGGTaGTCCACAAAAGTGAAGATA +
Preference number: 4 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSVATQR*STKVKI
Trigger: TATCTTCACTTTTGTGGATCACCGCTGTGTGGCTAC...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACACCGGAACCGGAACATaGCAGACAGCACTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNTGTGT*QTALGL
Trigger: AAGGCCAAGTGCTGTCTGTCATGTTCCGGTTCCGGT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR TCA 90 bp TACCTGAGGAAGGTAAAGGGTGAGGGTAGTAACCTGTATCCGCATTTATATGGCTGGTGTTGGTACAGATaGTGTACTCAATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: YLRKVKGEGSNLYPHLYGWCWYR*CTQFHL
Trigger: CAGATGAAATTGAGTACATCATCTGTACCAACACCA...GCCATATAAATGCGGATACAGGTTACTACCCTCACCCTTTACCTTCCTCAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR TCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCAAGGAGGATGGAGTCTaGAAGCTGCCCACACCAAAC +
Preference number: 4 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLKEDGV*KLPTPN
Trigger: GTTTGGTGTGGGCAGCTTTCAGACTCCATCCTCCTT...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR TCA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTCATGGTCCTCAAATATaGGGACATTTCTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTHGPQI*GHFSSP
Trigger: AGGAGAGGAGAAATGTCCTCATATTTGAGGACCATG...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCATCTTCCAGATAAGGTaGGAGCACCAAAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSIFQIR*EHQKQQ
Trigger: CTGCTGCTTTTGGTGCTCTCACCTTATCTGGAAGAT...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTTATCCGCAGAGCTCTaGTCATCATCCGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTLSAEL*SSSDLA
Trigger: TGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCATCAGTGGATGTGTTaGCAGTTCCCCGCAAGGACT +
Preference number: 4 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLHQWMC*QFPART
Trigger: AGTCCTTGCGGGGAACTGGCAACACATCCACTGATG...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTCATCAGTGGATGTGTTaGCAGTTCCCCGCAAGGACT +
Preference number: 4 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDIHQWMC*QFPART
Trigger: AGTCCTTGCGGGGAACTGGCAACACATCCACTGATG...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGGATCATAGAGTGTGCTaGCAAACCATTCAGACTGTG +
Preference number: 4 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPDHRVC*QTIQTV
Trigger: CACAGTCTGAATGGTTTGGCAGCACACTCTATGATC...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCACCTGATCATAGAGTGTaGTGCCAAACCATTCAGACT +
Preference number: 4 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPPDHRV*CQTIQT
Trigger: AGTCTGAATGGTTTGGCAGCACACTCTATGATCAGG...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTCCTGATCATAGAGTGTaGTGCCAAACCATTCAGACT +
Preference number: 4 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTPDHRV*CQTIQT
Trigger: AGTCTGAATGGTTTGGCAGCACACTCTATGATCAGG...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACTCTGAAGTGGAAAGCTaGTCACGAAGTTTATCCACA +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDSEVES*SRSLST
Trigger: TGTGGATAAACTTCGTGAGCAGCTTTCCACTTCAGA...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTGGTCCACAGAGCTACTaGCACACCTCATTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDIGPQSY*HTSFGK
Trigger: TTTGCCGAATGAGGTGTGGCAGTAGCTCTGTGGACC...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATAGCCAAGTCCATTCCTaGATCTGTTCCTCACAAAGC +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNSQVHS*ICSSQS
Trigger: GCTTTGTGAGGAACAGATGCAGGAATGGACTTGGCT...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAAGAATGTCCAATTCTGTTTaGTGTTGCTGCTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: YLVYTPTMRIFTGTANPRMSNSV*CCCCLG
Trigger: ACCCAGGCAGCAGCAACAGCAAACAGAATTGGACAT...TCTTGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCACTTCTCAAGGGGCTTaGTGTGTTCTGGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTTSQGA*CVLVLW
Trigger: CCACAGGACCAGAACACAGCAAGCCCCTTGAGAAGT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCTGGCCAGGTTGCTGTaGTGGCGGTTGTTGAACATG +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNLARLL*WRLLNM
Trigger: CATGTTCAACAACCGCCAGCACAGCAACCTGGCCAG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp ACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTCTTTCCAGAGGGACTaGTCACAGGCAGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: TLQEGFVFGLHSNNEDFHSFQRD*SQAAKR
Trigger: TCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGA...GTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTGCTCATCATCCGACCTaGCAAACCGCTCCTTATCGT +
Preference number: 4 (lower is better)
Translates to: SLNVFDNRQSYQQPTFYIAHHPT*QTAPYR
Trigger: ACGATAAGGAGCGGTTTGCCAGGTCGGATGATGAGC...AATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGCTCATCATCCGACCTaGCAAACCGCTCCTTATCGT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTAHHPT*QTAPYR
Trigger: ACGATAAGGAGCGGTTTGCCAGGTCGGATGATGAGC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAACACTGTGATTTTCCCTaGCAAGTCTCTCTTTATCCG +
Preference number: 4 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQHCDFP*QVSLYP
Trigger: CGGATAAAGAGAGACTTGCCAGGGAAAATCACAGTG...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ACCTGTATCCGCATTTATATGGCTATTGTTAATTACCAAGTGACCCTGTTGAGACCAGGGCACTACAGGTaGGTACCATATCTGACAGTT +
Preference number: 4 (lower is better)
Translates to: TCIRIYMAIVNYQVTLLRPGHYR*VPYLTV
Trigger: AACTGTCAGATATGGTACCCACCTGTAGTGCCCTGG...TCTCAACAGGGTCACTTGGTAATTAACAATAGCCATATAAATGCGGATACAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACTATAGGAGCCATCAGTaGATGTGTTGCCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LLKPHIYLQCFMVLKYEDYRSHQ*MCCQFP
Trigger: GGGGAACTGGCAACACATCCACTGATGGCTCCTATA...GTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCATTCAGACTGTGGCTaGTTCAAAACAGGAGTCACG +
Preference number: 4 (lower is better)
Translates to: PMLKLAKAPYIPTMFHGPHSDCG*FKTGVT
Trigger: CGTGACTCCTGTTTTGAACCAGCCACAGTCTGAATG...AGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAAGGGCATTTTCTGAAGTaGAAAGCTGCTCACGAAGTT +
Preference number: 4 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQGHFLK*KAAHEV
Trigger: AACTTCGTGAGCAGCTTTCCACTTCAGAAAATGCCC...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCTTTACAGCAAAACTTGCTTCCCTaGCCAGCCTCTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: CSITDNRINSRLSIFALQQNLLP*PASGSS
Trigger: TGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTG...CTGTAAAGCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp GGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATATGACAGACAGCACTTaGCCTTTTAATTTCACTACC +
Preference number: 4 (lower is better)
Translates to: GESTKSSSNPALSLNVFDMTDST*PFNFTT
Trigger: GGTAGTGAAATTAAAAGGCCAAGTGCTGTCTGTCAT...ATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTGGAGAGTGTAGGCCGTaGTTCTTGGCTAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCGECRP*FLARVL
Trigger: AAGAACTCTAGCCAAGAACCACGGCCTACACTCTCC...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp AGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAATGTGTTCTGGTCCTGTaGTTGTCACAGGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: SSNPALSLNVFDNRQSYQCVLVL*LSQAEP
Trigger: TGGTTCAGCCTGTGACAACCACAGGACCAGAACACA...TTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTGTGTTCTGGTCCTGTaGTTGTCACAGGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCCVLVL*LSQAEP
Trigger: TGGTTCAGCCTGTGACAACCACAGGACCAGAACACA...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCTGGCAGGGACAGTGCTaGAGGAGATGCCTTTACTCT +
Preference number: 4 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLWQGQC*RRCLYS
Trigger: AGAGTAAAGGCATCTCCTCCAGCACTGTCCCTGCCA...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCGGGAATGTGTTGCCCTaGGAGAATAGCTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLGNVLP*ENSCWV
Trigger: CACCCAACAGCTATTCTCCCAGGGCAACACATTCCC...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGGGAATGTGTTGCCCTaGGAGAATAGCTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTGNVLP*ENSCWV
Trigger: CACCCAACAGCTATTCTCCCAGGGCAACACATTCCC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAAGAGTGGCGGGAAATCTaGGCCAACATCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTEEWREI*ANICPA
Trigger: TGCAGGACAGATGTTGGCCCAGATTTCCCGCCACTC...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGAGTGGCGGGAAATCTaGGCCAACATCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNEWREI*ANICPA
Trigger: TGCAGGACAGATGTTGGCCCAGATTTCCCGCCACTC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACCTGCCCACACCAAACTaGGAAGTACGAGTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYLPTPN*EVRVLA
Trigger: TGCTAAGACTCGTACTTCCCAGTTTGGTGTGGGCAG...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp TCTTCAGAATTTCTTTCCAAAAACAAGCCATACTATCCAAGGCAAACAGTGGATGCCAGGTTGCTGTGCTaGCGGTTGTTGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: SSEFLSKNKPYYPRQTVDARLLC*RLLNML
Trigger: CAACATGTTCAACAACCGCCAGCACAGCAACCTGGC...ATCCACTGTTTGCCTTGGATAGTATGGCTTGTTTTTGGAAAGAAATTCTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGCCAGGTTGCTGTGCTaGCGGTTGTTGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTARLLC*RLLNML
Trigger: CAACATGTTCAACAACCGCCAGCACAGCAACCTGGC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACATGGACAGCATCTCCTaGAAGACCTCAGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNMDSIS*KTSGWP
Trigger: TGGCCAGCCTGAGGTCTTCCAGGAGATGCTGTCCAT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTCTGATCTCCCAGCATaGACAGCATCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCSDLPA*TASPGR
Trigger: TCTTCCAGGAGATGCTGTCCATGCTGGGAGATCAGA...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTTATATTGGCTGGGCATaGATGCAAGCGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSYIGWA*MQAQQR
Trigger: TCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATA...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTCAGTTGTATATTGGCTaGGCATGGATGCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCQLYIG*AWMQAQ
Trigger: CTGCGCTTGCATCCATGCCCAGCCAATATACAACTG...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACTTTACAGTTGTATATTaGCTGGGCATGGATGCAAGC +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDFTVVY*LGMDAS
Trigger: GCTTGCATCCATGCCCAGCCAATATACAACTGTAAA...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCGCAGCATTATCTTTATaGCCAAGTCTCGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSAALSL*PSLGFQ
Trigger: CTGGAACCCGAGACTTGGCCATAAAGATAATGCTGC...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTGGGTCATCATCTGCTaGGGGCCAGGCCTTGATGTA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNWVIIC*GPGLDV
Trigger: TACATCAAGGCCTGGCCCCCAGCAGATGATGACCCA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515192.5
3UTR CAA 72 bp CTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTaGCTAAAGCCCCATATATACCTACAATGTTTCATG +
Preference number: 4 (lower is better)
Translates to: LLTGSKKSLCSN*LKPHIYLQCFM
Trigger: CATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR CAA 72 bp TTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTaGCCAGCCTATTTAGGTAATGTTTGCAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: LWPSLGFQKVFI*PAYLGNVCRSS
Trigger: GGAAGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR CAA 72 bp ACTGGGTATTTTGAGTATGGGATGAAAGAGGCTACTTaGCAAGAGGGCTTCGTATTTGGTTTACACTCCAAC +
Preference number: 4 (lower is better)
Translates to: TGYFEYGMKEAT*QEGFVFGLHSN
Trigger: GTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCATCCCATACTCAAAATACCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
3UTR CAA 72 bp ATTTATATGGCTATTGTTAATTACCAAGTGACCCTGTaGAGATGGGTGTCCAGGCCCCATCTATCATACGGA +
Preference number: 4 (lower is better)
Translates to: IYMAIVNYQVTL*RWVSRPHLSYG
Trigger: TCCGTATGATAGATGGGGCCTGGACACCCATCTCAACAGGGTCACTTGGTAATTAACAATAGCCATATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCATGGCTCCTCCACCTTaGATTCCAGGTCCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTMAPPP*IPGPEF
Trigger: AAACTCTGGACCTGGAATTCAAGGTGGAGGAGCCAT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp ACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACCGTTCAATTTCACTGTaGTTTTCCCTGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: TLQEGFVFGLHSNNEDFHRSISL*FSLASL
Trigger: GAGACTTGCCAGGGAAAATCACAGTGAAATTGAACG...GTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCGCAAGGACTTCATGTaGGAAACTGCCATGCGTAAG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTRKDFM*ETAMRK
Trigger: CTTACGCATGGCAGTTTCTCACATGAAGTCCTTGCG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCCTCATGGAAGACTGCTaGCCTTCCTTTTTCACTGTT +
Preference number: 4 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSLMEDC*PSFFTV
Trigger: AACAGTGAAAAAGGAAGGTCAGCAGTCTTCCATGAG...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACAATAAACGATCTCCTTaGGCCCATACACATTCTCAT +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDNKRSP*AHTHSH
Trigger: ATGAGAATGTGTATGGGCTCAAGGAGATCGTTTATT...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTGGACCACCACGAAGTaGGGTTCCCCATCCTTTACA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNWTTTK*GSPSFT
Trigger: TGTAAAGGATGGGGAACCTCACTTCGTGGTGGTCCA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATTGTTGTGTCGGGAGATaGACTCTGTTGGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNCCVGR*TLLVDK
Trigger: TTTGTCAACCAACAGAGTTCATCTCCCGACACAACA...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGGGTGATCCACAAAAGTaGAGATACCCTCAATGTTGT +
Preference number: 4 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWGDPQK*RYPQCC
Trigger: ACAACATTGAGGGTATCTTCACTTTTGTGGATCACC...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAAGGTGATCCACAAAAGTaGAGATACCCTCAATGTTGT +
Preference number: 4 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQGDPQK*RYPQCC
Trigger: ACAACATTGAGGGTATCTTCACTTTTGTGGATCACC...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTGTAGCCACACAGCGGTaGTCCACAAAAGTGAAGATA +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCVATQR*STKVKI
Trigger: TATCTTCACTTTTGTGGATCACCGCTGTGTGGCTAC...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACTGCTGGTCTTCAGGATaGCAGAATTCTACAATATTC +
Preference number: 4 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDCWSSG*QNSTIF
Trigger: GAATATTGTAGAATTCTGTCATCCTGAAGACCAGCA...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCTGTCCTGCAGAAGCTaGTGGCTGGACAATGGTTAC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNLSCRS*WLDNGY
Trigger: GTAACCATTGTCCAGCCATCAGCTTCTGCAGGACAG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACAAGGAGGATGGAGTCTaGAAGCTGCCCACACCAAAC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNKEDGV*KLPTPN
Trigger: GTTTGGTGTGGGCAGCTTTCAGACTCCATCCTCCTT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR TCA 90 bp TTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACTTGCTCACTAGAACTTaGACGATGATGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLKPHIYLQCFMVLKYEDLLTRT*TMMRLL
Trigger: CAGCAGCCTCATCATCGTTCAAGTTCTAGTGAGCAA...GTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCCATGGTCCTCAAATATaGGGACATTTCTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSHGPQI*GHFSSP
Trigger: AGGAGAGGAGAAATGTCCTCATATTTGAGGACCATG...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTATCTTCCAGATAAGGTaGGAGCACCAAAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCIFQIR*EHQKQQ
Trigger: CTGCTGCTTTTGGTGCTCTCACCTTATCTGGAAGAT...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTGGGAGGCGTGCAATGTaGTCAGAACCCTATGATTTC +
Preference number: 4 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDIGRRAM*SEPYDF
Trigger: GAAATCATAGGGTTCTGATCACATTGCACGCCTCCC...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCATCAGTGGATGTGTTaGCAGTTCCCCGCAAGGACT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNHQWMC*QFPART
Trigger: AGTCCTTGCGGGGAACTGGCAACACATCCACTGATG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTACACATACACCACCCTaGCTGTCTCACATGAGACAA +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCTHTPP*LSHMRQ
Trigger: TTGTCTCATGTGAGACAGGCAGGGTGGTGTATGTGT...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACACACATACACCACCCTaGCTGTCTCACATGAGACAA +
Preference number: 4 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYTHTPP*LSHMRQ
Trigger: TTGTCTCATGTGAGACAGGCAGGGTGGTGTATGTGT...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGTCTGAAGTGGAAAGCTaGTCACGAAGTTTATCCACA +
Preference number: 4 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPSEVES*SRSLST
Trigger: TGTGGATAAACTTCGTGAGCAGCTTTCCACTTCAGA...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGGTCCACAGAGCTACTaGCACACCTCATTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNGPQSY*HTSFGK
Trigger: TTTGCCGAATGAGGTGTGGCAGTAGCTCTGTGGACC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp CTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCAGCCAAGTCCATTCCTaGATCTGTTCCTCACAAAGC +
Preference number: 4 (lower is better)
Translates to: LNVFDNRQSYQQPTFYICSQVHS*ICSSQS
Trigger: GCTTTGTGAGGAACAGATGCAGGAATGGACTTGGCT...GCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCGGAGAACTAGTTACCTaGAATCTGCCAATGGCCACT +
Preference number: 4 (lower is better)
Translates to: LNVFDNRQSYQQPTFYICGELVT*NLPMAT
Trigger: AGTGGCCATTGGCAGATTGCAGGTAACTAGTTCTCC...GCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCAGTGCTGGAGGAGATaGCTTTACTCTGATCCGCAT +
Preference number: 4 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLQCWRR*LYSDPH
Trigger: ATGCGGATCAGAGTAAAGGCATCTCCTCCAGCACTG...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp TGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCTTTACAGATGGAGTCTGAAAGCTaGCCACACCAAACTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CSITDNRINSRLSIFALQMESES*PHQTGK
Trigger: CTTCCCAGTTTGGTGTGGGCAGCTTTCAGACTCCAT...CTGTAAAGCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCATGGAGTCTGAAAGCTaGCCACACCAAACTGGGAAG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTMESES*PHQTGK
Trigger: CTTCCCAGTTTGGTGTGGGCAGCTTTCAGACTCCAT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTGTCTGGAATTGTCCTaGAGTCTGTCCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTCLELS*SLSSLR
Trigger: CCTGAGACTGGACAGACTGCAGGACAATTCCAGACA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTAGCAAAAAGAGCCTATaGTCAAACTTGCTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTSKKSL*SNLLKP
Trigger: GGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCAGTTTCCAGAGGCAATaGCTGGACCCAGTGATGGTA +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTSFQRQ*LDPVMV
Trigger: TACCATCACTGGGTCCAGCCATTGCCTCTGGAAACT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGCTCATCATCCGACCTaGCAAACCGCTCCTTATCGT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNAHHPT*QTAPYR
Trigger: ACGATAAGGAGCGGTTTGCCAGGTCGGATGATGAGC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp ATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTATAGGAGCCATCAGTaGATGTGTTGCCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: IYTYNVSWSSNMRTFLLSYRSHQ*MCCQFP
Trigger: GGGGAACTGGCAACACATCCACTGATGGCTCCTATA...GGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACATTCAGACTGTGGCTaGTTCAAAACAGGAGTCACG +
Preference number: 4 (lower is better)
Translates to: SSNPALSLNVFDNRQSYQHSDCG*FKTGVT
Trigger: CGTGACTCCTGTTTTGAACCAGCCACAGTCTGAATG...TTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACCATTCAGACTGTGGCTaGTTCAAAACAGGAGTCACG +
Preference number: 4 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYHSDCG*FKTGVT
Trigger: CGTGACTCCTGTTTTGAACCAGCCACAGTCTGAATG...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTTTTATCCACATCATCTaGGTGCACCTGATCATAGAG +
Preference number: 4 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTFIHII*VHLIIE
Trigger: CTCTATGATCAGGTGCACCCAGATGATGTGGATAAA...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCAAAACTTGCTTCCCTaGCCAGCCTCTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNQNLLP*PASGSS
Trigger: TGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCATCCAGAGCCATTCTTaGTTCTTAGACCGGAACCGG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTIQSHS*FLDRNR
Trigger: CCGGTTCCGGTCTAAGAACCAAGAATGGCTCTGGAT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGGAGAGTGTAGGCCGTaGTTCTTGGCTAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTGECRP*FLARVL
Trigger: AAGAACTCTAGCCAAGAACCACGGCCTACACTCTCC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp TATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAAGACAGTCCATCTCTTCCTaGTACCATGTCCAATTCTGT +
Preference number: 4 (lower is better)
Translates to: YLVYTPTMRIFTGTANPRQSISS*YHVQFC
Trigger: ACAGAATTGGACATGGTACCAGGAAGAGATGGACTG...TCTTGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGGGAATGATTGTAGCTaGCCAGTCCATCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTGNDCS*PVHLFL
Trigger: CAGGAAGAGATGGACTGGCCAGCTACAATCATTCCC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTGGCAGGGACAGTGCTaGAGGAGATGCCTTTACTCT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNWQGQC*RRCLYS
Trigger: AGAGTAAAGGCATCTCCTCCAGCACTGTCCCTGCCA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTCTGCTGTCCGTGTCTaGAATTGTCCTGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTSAVRV*NCPAVC
Trigger: ACAGACTGCAGGACAATTCCAGACACGGACAGCAGA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp ATCTTTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTATCCAAGGCAAACAGTaGATGTCAGGTTCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: IFMAKSRVPESVYLASLFIQGKQ*MSGSSN
Trigger: GTTAGAAGAACCTGACATCCACTGTTTGCCTTGGAT...AAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTCAGTTGTATATTGGCTaGGCATGGATGCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SLNVFDNRQSYQQPTFYIQLYIG*AWMQAQ
Trigger: CTGCGCTTGCATCCATGCCCAGCCAATATACAACTG...AATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACGCAGCATTATCTTTATaGCCAAGTCTCGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYAALSL*PSLGFQ
Trigger: CTGGAACCCGAGACTTGGCCATAAAGATAATGCTGC...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACCCAATCTCAAGATTaGAGGGAGCAAAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPTQSQD*REQRGK
Trigger: TTTTCCTCTTTGCTCCCTCCAATCTTGAGATTGGGT...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCTACCTGGCACCAGACTaGAGACATAAGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LNVFDNRQSYQQPTFYICYLAPD*RHKEGK
Trigger: TTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTA...GCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACGTTCAATTTCACTGTaGTTTTCCCTGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSNPALSLNVFDNRQSYQRSISL*FSLASL
Trigger: GAGACTTGCCAGGGAAAATCACAGTGAAATTGAACG...TTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACCGTTCAATTTCACTGTaGTTTTCCCTGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LLKPHIYLQCFMVLKYEDRSISL*FSLASL
Trigger: GAGACTTGCCAGGGAAAATCACAGTGAAATTGAACG...GTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATTATCTGACAGTTCTGTaGTGTAGGCTGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNYLTVL*CRLSSC
Trigger: ACAAGATGACAGCCTACATCACAGAACTGTCAGATA...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAAGGTGGGTACCATATCTaGCAGTTCTGTGATGTAGGC +
Preference number: 4 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTEGGYHI*QFCDVG
Trigger: GCCTACATCACAGAACTGTCAGATATGGTACCCACC...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGGTGGGTACCATATCTaGCAGTTCTGTGATGTAGGC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNGGYHI*QFCDVG
Trigger: GCCTACATCACAGAACTGTCAGATATGGTACCCACC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp ATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCCCTGCCTGTCTCACATaGGACAATAAACAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: IYTYNVSWSSNMRTFLLSPACLT*DNKQKA
Trigger: GGCTTTCTGTTTATTGTCTCATGTGAGACAGGCAGG...GGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTGTCAGGGCATTTTCTaGAGTGGAAAGCTGCTCACG +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNCQGIF*SGKLLT
Trigger: CGTGAGCAGCTTTCCACTTCAGAAAATGCCCTGACA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATGCTGGTCTTCAGGATaGCAGAATTCTACAATATTC +
Preference number: 4 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQCWSSG*QNSTIF
Trigger: GAATATTGTAGAATTCTGTCATCCTGAAGACCAGCA...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTACCCAGCTTTATCACTaGATGTGTTCGATAACAGAC +
Preference number: 4 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSTQLYH*MCSITD
Trigger: GTCTGTTATCGAACACATTCAGTGATAAAGCTGGGT...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACTTTACACTCCAACAATaGGGATTTTCACTGGGACGG +
Preference number: 4 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYFTLQQ*GFSLGR
Trigger: CCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAA...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATCTAAACTGGGTATTTTaGGTATGGGATGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNLNWVF*VWDERG
Trigger: GCCTCTTTCATCCCATACTCAAAATACCCAGTTTAG...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp ACCTGTATCCGCATTTATATGGCTATTGTTAATTACCAAGTGACCCTGTTGAGAGATCATAGAGTGTGCTaGCAAACCATTCAGACTGTG +
Preference number: 4 (lower is better)
Translates to: TCIRIYMAIVNYQVTLLRDHRVC*QTIQTV
Trigger: CACAGTCTGAATGGTTTGGCAGCACACTCTATGATC...TCTCAACAGGGTCACTTGGTAATTAACAATAGCCATATAAATGCGGATACAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCATGTCCAATTCTGTTTaGTGTTGCTGCTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTMSNSV*CCCCLG
Trigger: ACCCAGGCAGCAGCAACAGCAAACAGAATTGGACAT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCAGTGCTGGAGGAGATaGCTTTACTCTGATCCGCAT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNQCWRR*LYSDPH
Trigger: ATGCGGATCAGAGTAAAGGCATCTCCTCCAGCACTG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTGTCTGGAATTGTCCTaGAGTCTGTCCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNCLELS*SLSSLR
Trigger: CCTGAGACTGGACAGACTGCAGGACAATTCCAGACA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp ATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCTTTCCAGAGGGACTaGTCACAGGCAGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: IYTYNVSWSSNMRTFLLSSFQRD*SQAAKR
Trigger: TCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGA...GGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCCAGGGCACTACAGGTaGGTACCATATCTGACAGTT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNPGHYR*VPYLTV
Trigger: AACTGTCAGATATGGTACCCACCTGTAGTGCCCTGG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTATAGGAGCCATCAGTaGATGTGTTGCCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNYRSHQ*MCCQFP
Trigger: GGGGAACTGGCAACACATCCACTGATGGCTCCTATA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATTTTATCCACATCATCTaGGTGCACCTGATCATAGAG +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNFIHII*VHLIIE
Trigger: CTCTATGATCAGGTGCACCCAGATGATGTGGATAAA...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACCCATACACATTCTCATaGAAGACTGCTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYPYTFS*KTADLP
Trigger: AGGAAGGTCAGCAGTCTTCCATGAGAATGTGTATGG...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAACCTGCAATCTGCCAATaGCCACTAGGCAAAACTTGC +
Preference number: 4 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTEPAICQ*PLGKTC
Trigger: GCAAGTTTTGCCTAGTGGCCATTGGCAGATTGCAGG...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCCTGCAATCTGCCAATaGCCACTAGGCAAAACTTGC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNPAICQ*PLGKTC
Trigger: GCAAGTTTTGCCTAGTGGCCATTGGCAGATTGCAGG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp TCTTCAGAATTTCTTTCCAAAAACAAGCCATACTATCCAAGGCAAACAGTGGATGTAGGCCGTGGTTCTTaGCTAGAGTTCTTCACATTG +
Preference number: 4 (lower is better)
Translates to: SSEFLSKNKPYYPRQTVDVGRGS*LEFFTL
Trigger: CAATGTGAAGAACTCTAGCCAAGAACCACGGCCTAC...ATCCACTGTTTGCCTTGGATAGTATGGCTTGTTTTTGGAAAGAAATTCTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp TGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCTTTACAGGTAGGCCGTGGTTCTTaGCTAGAGTTCTTCACATTG +
Preference number: 4 (lower is better)
Translates to: CSITDNRINSRLSIFALQVGRGS*LEFFTL
Trigger: CAATGTGAAGAACTCTAGCCAAGAACCACGGCCTAC...CTGTAAAGCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTGTGTTCTGGTCCTGTaGTTGTCACAGGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNCVLVL*LSQAEP
Trigger: TGGTTCAGCCTGTGACAACCACAGGACCAGAACACA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCTGCCCACACCAAACTaGGAAGTACGAGTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNLPTPN*EVRVLA
Trigger: TGCTAAGACTCGTACTTCCCAGTTTGGTGTGGGCAG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTCTGATCTCCCAGCATaGACAGCATCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNSDLPA*TASPGR
Trigger: TCTTCCAGGAGATGCTGTCCATGCTGGGAGATCAGA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTATATTGGCTGGGCATaGATGCAAGCGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDIYIGWA*MQAQQR
Trigger: TCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATA...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATACCCAATCTCAAGATTaGAGGGAGCAAAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNTQSQD*REQRGK
Trigger: TTTTCCTCTTTGCTCCCTCCAATCTTGAGATTGGGT...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCAAATGGACATTCCTTTaGCCTCTTCAAGGCCACCCT +
Preference number: 4 (lower is better)
Translates to: IYTYNVSWSSNMRTFLLSKWTFL*PLQGHP
Trigger: AGGGTGGCCTTGAAGAGGCCAAAGGAATGTCCATTT...GGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCGTTCAATTTCACTGTaGTTTTCCCTGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTRSISL*FSLASL
Trigger: GAGACTTGCCAGGGAAAATCACAGTGAAATTGAACG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTATCTGACAGTTCTGTaGTGTAGGCTGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCYLTVL*CRLSSC
Trigger: ACAAGATGACAGCCTACATCACAGAACTGTCAGATA...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTCAGTTCCTGATCAGTaGGGAAAGACGGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNSVPDQ*GKTAYR
Trigger: CCTATAAGCCGTCTTTCCTCACTGATCAGGAACTGA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp TCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTAAATGTTTCAGTTCCTaGTCAGTGAGGAAAGACGGC +
Preference number: 4 (lower is better)
Translates to: SLNVFDNRQSYQQPTFYIKCFSS*SVRKDG
Trigger: GCCGTCTTTCCTCACTGATCAGGAACTGAAACATTT...AATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TCTTCAGAATTTCTTTCCAAAAACAAGCCATACTATCCAAGGCAAACAGTGGATAAATGTTTCAGTTCCTaGTCAGTGAGGAAAGACGGC +
Preference number: 4 (lower is better)
Translates to: SSEFLSKNKPYYPRQTVDKCFSS*SVRKDG
Trigger: GCCGTCTTTCCTCACTGATCAGGAACTGAAACATTT...ATCCACTGTTTGCCTTGGATAGTATGGCTTGTTTTTGGAAAGAAATTCTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCCTGCCTGTCTCACATaGGACAATAAACAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNPACLT*DNKQKA
Trigger: GGCTTTCTGTTTATTGTCTCATGTGAGACAGGCAGG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCTCATGGAAGACTGCTaGCCTTCCTTTTTCACTGTT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTLMEDC*PSFFTV
Trigger: AACAGTGAAAAAGGAAGGTCAGCAGTCTTCCATGAG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp CCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTAATAAACGATCTCCTTaGGCCCATACACATTCTCAT +
Preference number: 4 (lower is better)
Translates to: PMLKLAKAPYIPTMFHGPNKRSP*AHTHSH
Trigger: ATGAGAATGTGTATGGGCTCAAGGAGATCGTTTATT...AGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCAATAAACGATCTCCTTaGGCCCATACACATTCTCAT +
Preference number: 4 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSNKRSP*AHTHSH
Trigger: ATGAGAATGTGTATGGGCTCAAGGAGATCGTTTATT...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGATGAACTCTGTTGGTTaGCAAACATTACTCATGTCT +
Preference number: 4 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWMNSVG*QTLLMS
Trigger: AGACATGAGTAATGTTTGTCAACCAACAGAGTTCAT...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTGTTGTGTCGGGAGATaGACTCTGTTGGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTCCVGR*TLLVDK
Trigger: TTTGTCAACCAACAGAGTTCATCTCCCGACACAACA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGTAGCCACACAGCGGTaGTCCACAAAAGTGAAGATA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNVATQR*STKVKI
Trigger: TATCTTCACTTTTGTGGATCACCGCTGTGTGGCTAC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTTGCTGGTCTTCAGGATaGCAGAATTCTACAATATTC +
Preference number: 4 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSCWSSG*QNSTIF
Trigger: GAATATTGTAGAATTCTGTCATCCTGAAGACCAGCA...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTTGGTGTTGGTACAGATaGTGTACTCAATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSWCWYR*CTQFHL
Trigger: CAGATGAAATTGAGTACATCATCTGTACCAACACCA...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR TCA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAATTGCTCACTAGAACTTaGACGATGATGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTELLTRT*TMMRLL
Trigger: CAGCAGCCTCATCATCGTTCAAGTTCTAGTGAGCAA...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTGCTCACTAGAACTTaGACGATGATGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNLLTRT*TMMRLL
Trigger: CAGCAGCCTCATCATCGTTCAAGTTCTAGTGAGCAA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTCATGGTCCTCAAATATaGGGACATTTCTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDIHGPQI*GHFSSP
Trigger: AGGAGAGGAGAAATGTCCTCATATTTGAGGACCATG...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAAGAATTTTGAGTATGGGATaGAAGAGGCTACTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: YLVYTPTMRIFTGTANPRILSMG*KRLLCK
Trigger: CTTGCAAAGTAGCCTCTTTCATCCCATACTCAAAAT...TCTTGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTCTAAACTGGGTATTTTaGGTATGGGATGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCLNWVF*VWDERG
Trigger: GCCTCTTTCATCCCATACTCAAAATACCCAGTTTAG...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCACTCCTCAGTCCCCTATaGCTACATTTAATATATCTT +
Preference number: 4 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPLLSPL*LHLIYL
Trigger: AAGATATATTAAATGTAGTCATAGGGGACTGAGGAG...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACTGTGAGAAACTGCCATaGGTAAGATGGTTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LLKPHIYLQCFMVLKYEDCEKLP*VRWLAC
Trigger: ACAAGCTAACCATCTTACGCATGGCAGTTTCTCACA...GTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACACACATACACCACCCTaGCTGTCTCACATGAGACAA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNTHTPP*LSHMRQ
Trigger: TTGTCTCATGTGAGACAGGCAGGGTGGTGTATGTGT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGATCATAGAGTGTGCTaGCAAACCATTCAGACTGTG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTDHRVC*QTIQTV
Trigger: CACAGTCTGAATGGTTTGGCAGCACACTCTATGATC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp TCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTCCTGATCATAGAGTGTaGTGCCAAACCATTCAGACT +
Preference number: 4 (lower is better)
Translates to: SLNVFDNRQSYQQPTFYIPDHRV*CQTIQT
Trigger: AGTCTGAATGGTTTGGCAGCACACTCTATGATCAGG...AATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCCTGATCATAGAGTGTaGTGCCAAACCATTCAGACT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTPDHRV*CQTIQT
Trigger: AGTCTGAATGGTTTGGCAGCACACTCTATGATCAGG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp TTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACTCTGAAGTGGAAAGCTaGTCACGAAGTTTATCCACA +
Preference number: 4 (lower is better)
Translates to: LLKPHIYLQCFMVLKYEDSEVES*SRSLST
Trigger: TGTGGATAAACTTCGTGAGCAGCTTTCCACTTCAGA...GTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACAGCCAAGTCCATTCCTaGATCTGTTCCTCACAAAGC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNSQVHS*ICSSQS
Trigger: GCTTTGTGAGGAACAGATGCAGGAATGGACTTGGCT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGGAGAACTAGTTACCTaGAATCTGCCAATGGCCACT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNGELVT*NLPMAT
Trigger: AGTGGCCATTGGCAGATTGCAGGTAACTAGTTCTCC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACATGTCCAATTCTGTTTaGTGTTGCTGCTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNMSNSV*CCCCLG
Trigger: ACCCAGGCAGCAGCAACAGCAAACAGAATTGGACAT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp TGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCTTTACAGCACTGTGATTTTCCCTaGCAAGTCTCTCTTTATCCG +
Preference number: 4 (lower is better)
Translates to: CSITDNRINSRLSIFALQHCDFP*QVSLYP
Trigger: CGGATAAAGAGAGACTTGCCAGGGAAAATCACAGTG...CTGTAAAGCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCACTGTGATTTTCCCTaGCAAGTCTCTCTTTATCCG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTHCDFP*QVSLYP
Trigger: CGGATAAAGAGAGACTTGCCAGGGAAAATCACAGTG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCATTCAGACTGTGGCTaGTTCAAAACAGGAGTCACG +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNHSDCG*FKTGVT
Trigger: CGTGACTCCTGTTTTGAACCAGCCACAGTCTGAATG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTGGGCATTTTCTGAAGTaGAAAGCTGCTCACGAAGTT +
Preference number: 4 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDIGHFLK*KAAHEV
Trigger: AACTTCGTGAGCAGCTTTCCACTTCAGAAAATGCCC...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCCATACACATTCTCATaGAAGACTGCTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTPYTFS*KTADLP
Trigger: AGGAAGGTCAGCAGTCTTCCATGAGAATGTGTATGG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp ACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACAATTTCACTACCTGTTaGAAGCTGTCTCTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: TLQEGFVFGLHSNNEDFHNFTTC*KLSLRS
Trigger: GCTTCTAAGAGACAGCTTCCAACAGGTAGTGAAATT...GTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGTAGGCCGTGGTTCTTaGCTAGAGTTCTTCACATTG +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNVGRGS*LEFFTL
Trigger: CAATGTGAAGAACTCTAGCCAAGAACCACGGCCTAC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCCTAGTTGTGGCCTCTaGATTGTGTTGGAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNPSCGL*IVLESV
Trigger: TACACTCTCCAACACAATCCAGAGGCCACAACTAGG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTTACAGTTGTATATTaGCTGGGCATGGATGCAAGC +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCFTVVY*LGMDAS
Trigger: GCTTGCATCCATGCCCAGCCAATATACAACTGTAAA...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCGGGAAACTCAGCAAATaGACATTCCTTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: IYTYNVSWSSNMRTFLLSGKLSK*TFLWPL
Trigger: AAGAGGCCAAAGGAATGTCCATTTGCTGAGTTTCCC...GGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp TCTTCAGAATTTCTTTCCAAAAACAAGCCATACTATCCAAGGCAAACAGTGGATGGGAAACTCAGCAAATaGACATTCCTTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SSEFLSKNKPYYPRQTVDGKLSK*TFLWPL
Trigger: AAGAGGCCAAAGGAATGTCCATTTGCTGAGTTTCCC...ATCCACTGTTTGCCTTGGATAGTATGGCTTGTTTTTGGAAAGAAATTCTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTTTTACTCCACTACCTaGCACCAGACTGGAGACATA +
Preference number: 4 (lower is better)
Translates to: IYTYNVSWSSNMRTFLLSFYSTT*HQTGDI
Trigger: TATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAA...GGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTAACTATAGATTCCTCTaGTTGTGGGTGCCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCNYRFL*LWVPVV
Trigger: AACAACAGGCACCCACAACCAGAGGAATCTATAGTT...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358595.10
3UTR CAA 72 bp TTGTATGTCTGGAGCTTAAACTATAGATTCCTCTGGTaGTGGGTGCCTGTTGTTTATGAACTGGAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LYVWSLNYRFLW*WVPVVYELERN
Trigger: ATTCCTTTCCAGTTCATAAACAACAGGCACCCACAACCAGAGGAATCTATAGTTTAAGCTCCAGACATACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTATCTGACAGTTCTGTaGTGTAGGCTGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTYLTVL*CRLSSC
Trigger: ACAAGATGACAGCCTACATCACAGAACTGTCAGATA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACAAATGTTTCAGTTCCTaGTCAGTGAGGAAAGACGGC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNKCFSS*SVRKDG
Trigger: GCCGTCTTTCCTCACTGATCAGGAACTGAAACATTT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAACTCATGGAAGACTGCTaGCCTTCCTTTTTCACTGTT +
Preference number: 4 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTELMEDC*PSFFTV
Trigger: AACAGTGAAAAAGGAAGGTCAGCAGTCTTCCATGAG...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGGTGATCCACAAAAGTaGAGATACCCTCAATGTTGT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTGDPQK*RYPQCC
Trigger: ACAACATTGAGGGTATCTTCACTTTTGTGGATCACC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp TCTTCAGAATTTCTTTCCAAAAACAAGCCATACTATCCAAGGCAAACAGTGGATACCCAGCTTTATCACTaGATGTGTTCGATAACAGAC +
Preference number: 4 (lower is better)
Translates to: SSEFLSKNKPYYPRQTVDTQLYH*MCSITD
Trigger: GTCTGTTATCGAACACATTCAGTGATAAAGCTGGGT...ATCCACTGTTTGCCTTGGATAGTATGGCTTGTTTTTGGAAAGAAATTCTGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTGTGAGAAACTGCCATaGGTAAGATGGTTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTCEKLP*VRWLAC
Trigger: ACAAGCTAACCATCTTACGCATGGCAGTTTCTCACA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp TCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTCAGAAAGCCATCTGCTaGCTCCAAGATCAAATGTTT +
Preference number: 4 (lower is better)
Translates to: SLNVFDNRQSYQQPTFYIQKAIC*LQDQMF
Trigger: AAACATTTGATCTTGGAGGCAGCAGATGGCTTTCTG...AATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp TCTTCAGAATTTCTTTCCAAAAACAAGCCATACTATCCAAGGCAAACAGTGGATCAGAAAGCCATCTGCTaGCTCCAAGATCAAATGTTT +
Preference number: 4 (lower is better)
Translates to: SSEFLSKNKPYYPRQTVDQKAIC*LQDQMF
Trigger: AAACATTTGATCTTGGAGGCAGCAGATGGCTTTCTG...ATCCACTGTTTGCCTTGGATAGTATGGCTTGTTTTTGGAAAGAAATTCTGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTAGCAAAAAGAGCCTATaGTCAAACTTGCTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDISKKSL*SNLLKP
Trigger: GGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCAGCAAAAAGAGCCTATaGTCAAACTTGCTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLSKKSL*SNLLKP
Trigger: GGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAAGTTGAGTTTCCATaGAGAAATAACCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNEVEFP*RNNLYR
Trigger: TCTGTAGAGGTTATTTCTGCATGGAAACTCAACTTC...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTGAAGTTGAGTTTCCATaGAGAAATAACCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSEVEFP*RNNLYR
Trigger: TCTGTAGAGGTTATTTCTGCATGGAAACTCAACTTC...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp ATCTTTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTGACTTAAATCTCAGTTaGTTGCTAAACTGGGTATTT +
Preference number: 4 (lower is better)
Translates to: IFMAKSRVPESVYLASLFDLNLS*LLNWVF
Trigger: AAATACCCAGTTTAGCAAGCAACTGAGATTTAAGTC...AAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATTCATTAATTCAGTCTTaGACTTTAGCTACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNSLIQS*TLATGQ
Trigger: TTGGCCAGTAGCTAAAGTGCAAGACTGAATTAATGA...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTTTATCCACATCATCTaGGTGCACCTGATCATAGAG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTFIHII*VHLIIE
Trigger: CTCTATGATCAGGTGCACCCAGATGATGTGGATAAA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGGGCATTTTCTGAAGTaGAAAGCTGCTCACGAAGTT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNGHFLK*KAAHEV
Trigger: AACTTCGTGAGCAGCTTTCCACTTCAGAAAATGCCC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAACCATACACATTCTCATaGAAGACTGCTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTEPYTFS*KTADLP
Trigger: AGGAAGGTCAGCAGTCTTCCATGAGAATGTGTATGG...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCCATACACATTCTCATaGAAGACTGCTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNPYTFS*KTADLP
Trigger: AGGAAGGTCAGCAGTCTTCCATGAGAATGTGTATGG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACAATTTCACTACCTGTTaGAAGCTGTCTCTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYNFTTC*KLSLRS
Trigger: GCTTCTAAGAGACAGCTTCCAACAGGTAGTGAAATT...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCAGTCCATCTCTTCCTaGTACCATGTCCAATTCTGT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNQSISS*YHVQFC
Trigger: ACAGAATTGGACATGGTACCAGGAAGAGATGGACTG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTTGGATCTCTATCCTaGGCAAATAAACCATCTGAC +
Preference number: 4 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLLGSLS*ANKPSD
Trigger: GTCAGATGGTTTATTTGCCCAGGATAGAGATCCAAG...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCATCCAAGGCAAACAGTaGATGTCAGGTTCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTIQGKQ*MSGSSN
Trigger: GTTAGAAGAACCTGACATCCACTGTTTGCCTTGGAT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp ACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACGGCTGCAATACTAAGTaGAAAATACCTGGAAGATTT +
Preference number: 4 (lower is better)
Translates to: TLQEGFVFGLHSNNEDFHGCNTK*KIPGRF
Trigger: AAATCTTCCAGGTATTTTCCACTTAGTATTGCAGCC...GTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCAGATTCCTCTGGTTGTaGGTGCCTGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTRFLWL*VPVVYE
Trigger: TTCATAAACAACAGGCACCCACAACCAGAGGAATCT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR TCA 90 bp CTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCTTATCGTTAGACATCTaGTCATCATCACACCTCAAA +
Preference number: 4 (lower is better)
Translates to: LNVFDNRQSYQQPTFYICLSLDI*SSSHLK
Trigger: TTTGAGGTGTGATGATGATCAGATGTCTAACGATAA...GCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTATCGTTAGACATCTaGTCATCATCACACCTCAAA +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCLSLDI*SSSHLK
Trigger: TTTGAGGTGTGATGATGATCAGATGTCTAACGATAA...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTGCTGGTCTTCAGGATaGCAGAATTCTACAATATTC +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTCWSSG*QNSTIF
Trigger: GAATATTGTAGAATTCTGTCATCCTGAAGACCAGCA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTGTACTCAATTTCATCTaGGTAAGGGTTCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDIVLNFI*VRVLES
Trigger: ACTTTCCAGAACCCTTACTCAGATGAAATTGAGTAC...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGTACTCAATTTCATCTaGGTAAGGGTTCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTVLNFI*VRVLES
Trigger: ACTTTCCAGAACCCTTACTCAGATGAAATTGAGTAC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTGGTGTTGGTACAGATaGTGTACTCAATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTWCWYR*CTQFHL
Trigger: CAGATGAAATTGAGTACATCATCTGTACCAACACCA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR TCA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTATTTTGAGTATGGGATaGAAGAGGCTACTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDIILSMG*KRLLCK
Trigger: CTTGCAAAGTAGCCTCTTTCATCCCATACTCAAAAT...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACCTCCTCAGTCCCCTATaGCTACATTTAATATATCTT +
Preference number: 4 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYLLSPL*LHLIYL
Trigger: AAGATATATTAAATGTAGTCATAGGGGACTGAGGAG...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTGTGAGAAACTGCCATaGGTAAGATGGTTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNCEKLP*VRWLAC
Trigger: ACAAGCTAACCATCTTACGCATGGCAGTTTCTCACA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCAGAAAGCCATCTGCTaGCTCCAAGATCAAATGTTT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNQKAIC*LQDQMF
Trigger: AAACATTTGATCTTGGAGGCAGCAGATGGCTTTCTG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTCTGAAGTGGAAAGCTaGTCACGAAGTTTATCCACA +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNSEVES*SRSLST
Trigger: TGTGGATAAACTTCGTGAGCAGCTTTCCACTTCAGA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp AGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAAGAAGTTGAGTTTCCATaGAGAAATAACCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: SSNPALSLNVFDNRQSYQEVEFP*RNNLYR
Trigger: TCTGTAGAGGTTATTTCTGCATGGAAACTCAACTTC...TTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTTACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCAATTTCACTACCTGTTaGAAGCTGTCTCTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTNFTTC*KLSLRS
Trigger: GCTTCTAAGAGACAGCTTCCAACAGGTAGTGAAATT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCATGACAGACAGCACTTaGCCTTTTAATTTCACTACC +
Preference number: 4 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLMTDST*PFNFTT
Trigger: GGTAGTGAAATTAAAAGGCCAAGTGCTGTCTGTCAT...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCTTGGATCTCTATCCTaGGCAAATAAACCATCTGAC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNLGSLS*ANKPSD
Trigger: GTCAGATGGTTTATTTGCCCAGGATAGAGATCCAAG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp ACCTGTATCCGCATTTATATGGCTATTGTTAATTACCAAGTGACCCTGTTGAGAGGCTGCAATACTAAGTaGAAAATACCTGGAAGATTT +
Preference number: 4 (lower is better)
Translates to: TCIRIYMAIVNYQVTLLRGCNTK*KIPGRF
Trigger: AAATCTTCCAGGTATTTTCCACTTAGTATTGCAGCC...TCTCAACAGGGTCACTTGGTAATTAACAATAGCCATATAAATGCGGATACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCTTATCGTTAGACATCTaGTCATCATCACACCTCAAA +
Preference number: 4 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLLSLDI*SSSHLK
Trigger: TTTGAGGTGTGATGATGATCAGATGTCTAACGATAA...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTTATCGTTAGACATCTaGTCATCATCACACCTCAAA +
Preference number: 4 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTLSLDI*SSSHLK
Trigger: TTTGAGGTGTGATGATGATCAGATGTCTAACGATAA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACAATAAACGATCTCCTTaGGCCCATACACATTCTCAT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNNKRSP*AHTHSH
Trigger: ATGAGAATGTGTATGGGCTCAAGGAGATCGTTTATT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR TCA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAAATTTTGAGTATGGGATaGAAGAGGCTACTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTEILSMG*KRLLCK
Trigger: CTTGCAAAGTAGCCTCTTTCATCCCATACTCAAAAT...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCTCATTAATTCAGTCTTaGACTTTAGCTACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLSLIQS*TLATGQ
Trigger: TTGGCCAGTAGCTAAAGTGCAAGACTGAATTAATGA...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACATGACAGACAGCACTTaGCCTTTTAATTTCACTACC +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNMTDST*PFNFTT
Trigger: GGTAGTGAAATTAAAAGGCCAAGTGCTGTCTGTCAT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CCA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTAAACAAGGGTTCCATTaGAAACTCAACTTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCKQGFH*KLNFLV
Trigger: AACCAAAAAGTTGAGTTTCCAATGGAACCCTTGTTT...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAAATGAACTCTGTTGGTTaGCAAACATTACTCATGTCT +
Preference number: 4 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTEMNSVG*QTLLMS
Trigger: AGACATGAGTAATGTTTGTCAACCAACAGAGTTCAT...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR TCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACATGAACTCTGTTGGTTaGCAAACATTACTCATGTCT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNMNSVG*QTLLMS
Trigger: AGACATGAGTAATGTTTGTCAACCAACAGAGTTCAT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR GCA 90 bp ATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCGACTTAAATCTCAGTTaGTTGCTAAACTGGGTATTT +
Preference number: 4 (lower is better)
Translates to: IYTYNVSWSSNMRTFLLSDLNLS*LLNWVF
Trigger: AAATACCCAGTTTAGCAAGCAACTGAGATTTAAGTC...GGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGGCTGCAATACTAAGTaGAAAATACCTGGAAGATTT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNGCNTK*KIPGRF
Trigger: AAATCTTCCAGGTATTTTCCACTTAGTATTGCAGCC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR GCA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGACTTAAATCTCAGTTaGTTGCTAAACTGGGTATTT +
Preference number: 4 (lower is better)
Translates to: QINTIQFQVRRHKERCFNDLNLS*LLNWVF
Trigger: AAATACCCAGTTTAGCAAGCAACTGAGATTTAAGTC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS GCA 90 bp AGATCCACGATTGGTGAGACTAGGGTAGGCAGCAGCACCAGGCGATaGAGTTGGGGCACCAGGGAGGGACATGGAGCTGAAGGAGGATGG +
Preference number: 5 (lower is better)
Translates to: RSTIGETRVGSSTRR*SWGTREGHGAEGGW
Trigger: CCATCCTCCTTCAGCTCCATGTCCCTCCCTGGTGCCCCAACTGCATCGCCTGGTGCTGCTGCCTACCCTAGTCTCACCAATCGTGGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS CCA 90 bp ACGATTGGTGAGACTAGGGTAGGCAGCAGCACCAGGCGATGCAGTTaGGGCACCAGGGAGGGACATGGAGCTGAAGGAGGATGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: TIGETRVGSSTRRCS*GTREGHGAEGGWSL
Trigger: CAGACTCCATCCTCCTTCAGCTCCATGTCCCTCCCTGGTGCCCCAACTGCATCGCCTGGTGCTGCTGCCTACCCTAGTCTCACCAATCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS TCA 90 bp CATTTCTGTAGTCCCAGCTACTCGGGGTCTGAGGCAGGAGAATCTTaGGTCCAAGATCAGGCGGGGTTGGCAGTAGTCGCCGCCATGGCC +
Preference number: 5 (lower is better)
Translates to: HFCSPSYSGSEAGES*VQDQAGLAVVAAMA
Trigger: GGCCATGGCGGCGACTACTGCCAACCCCGCCTGATCTTGGACTCAAGATTCTCCTGCCTCAGACCCCGAGTAGCTGGGACTACAGAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515192.5
CDS CCA 90 bp GTTACCTGCAATCTGCCAATGGCCACTAGGCAAAACTTGCTTCCCTaGCCAGCCTCTGGGTCATCATCTGCTGGGGGCCAGGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: VTCNLPMATRQNLLP*PASGSSSAGGQALM
Trigger: CATCAAGGCCTGGCCCCCAGCAGATGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGCCATTGGCAGATTGCAGGTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515192.5
CDS TCA 90 bp CCTGGTCGCCGCTTAATAGCCCTCTGGACAATGGCTCCTCCACCTTaGATTCCAGGTCCAGAGTTTCCAGAGGCAATGGCTGGACCCAGT +
Preference number: 5 (lower is better)
Translates to: PGRRLIALWTMAPPP*IPGPEFPEAMAGPS
Trigger: ACTGGGTCCAGCCATTGCCTCTGGAAACTCTGGACCTGGAATTCAAGGTGGAGGAGCCATTGTCCAGAGGGCTATTAAGCGGCGACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000497108.6
ENST00000504358.1
ENST00000505755.5
ENST00000505979.5
ENST00000515192.5
CDS CCA 90 bp GTTACCTGCAATCTGCCAATGGCCACTAGGCAAAACTTGCTTCCCTaGCCAGCCTCTGGGTCATCATCTGGGAGGGAAACACCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: VTCNLPMATRQNLLP*PASGSSSGRETPAG
Trigger: CCCAGCAGGTGTTTCCCTCCCAGATGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGCCATTGGCAGATTGCAGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000505755.5
CDS CCA 90 bp CGATGCAGTTGGGGCACCAGGGAGGGACATGGAGCTGAAGGAGGATaGAGTCTGAAAGCTGCCCACACCAAACTGGGAAGTACGAGTCTT +
Preference number: 5 (lower is better)
Translates to: RCSWGTREGHGAEGG*SLKAAHTKLGSTSL
Trigger: AAGACTCGTACTTCCCAGTTTGGTGTGGGCAGCTTTCAGACTCCATCCTCCTTCAGCTCCATGTCCCTCCCTGGTGCCCCAACTGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS TCA 90 bp GTTGGGGCACCAGGGAGGGACATGGAGCTGAAGGAGGATGGAGTCTaGAAGCTGCCCACACCAAACTGGGAAGTACGAGTCTTAGCAGTA +
Preference number: 5 (lower is better)
Translates to: VGAPGRDMELKEDGV*KLPTPNWEVRVLAV
Trigger: TACTGCTAAGACTCGTACTTCCCAGTTTGGTGTGGGCAGCTTTCAGACTCCATCCTCCTTCAGCTCCATGTCCCTCCCTGGTGCCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS CCA 90 bp TGGCGGGAAATCTGGGCCAACATCTGTCCTGCAGAAGCTGATGGCTaGACAATGGTTACAGGAGGGGCTAGGCCACTGAAATTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: WREIWANICPAEADG*TMVTGGARPLKFSA
Trigger: GGCAGAGAATTTCAGTGGCCTAGCCCCTCCTGTAACCATTGTCCAGCCATCAGCTTCTGCAGGACAGATGTTGGCCCAGATTTCCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354396.6
CDS-3UTR CAA 90 bp CACCCTCTGCTGTCCGTGTCTGGAATTGTCCTGCAGTCTGTCCAGTCTCAGGAGTGTCCGTGTCTGGAATaGTCCTGCAGTCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: HPLLSVSGIVLQSVQSQECPCLE*SCSLSS
Trigger: ACTGGACAGACTGCAGGACAATTCCAGACACGGACA...CTCCTGAGACTGGACAGACTGCAGGACAATTCCAGACACGGACAGCAGAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS CCA 90 bp TGGCTCCTCCACCTTGAATTCCAGGTCCAGAGTTTCCAGAGGCAATaGCTGGACCCAGTGATGGTACATCTGATGTCATTTCGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: WLLHLEFQVQSFQRQ*LDPVMVHLMSFRGW
Trigger: CCAACCCCGAAATGACATCAGATGTACCATCACTGGGTCCAGCCATTGCCTCTGGAAACTCTGGACCTGGAATTCAAGGTGGAGGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000497108.6
ENST00000504358.1
ENST00000505755.5
ENST00000505979.5
CDS CCA 90 bp CCCATCTCCAGGGGTAAATTAGCTGTGGGACCTAGTTGTGGCCTCTaGATTGTGTTGGAGAGTGTAGGCCGTGGTTCTTGGCTAGAGTTC +
Preference number: 5 (lower is better)
Translates to: PISRGKLAVGPSCGL*IVLESVGRGSWLEF
Trigger: GAACTCTAGCCAAGAACCACGGCCTACACTCTCCAACACAATCCAGAGGCCACAACTAGGTCCCACAGCTAATTTACCCCTGGAGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000505755.5
ENST00000510273.1
ENST00000515192.5
CDS CCA 90 bp CTGAACCACCTGGGAATGATTGTAGCTGGCCAGTCCATCTCTTCCTaGTACCATGTCCAATTCTGTTTGCTGTTGCTGCTGCCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: LNHLGMIVAGQSISS*YHVQFCLLLLLPGC
Trigger: GCACCCAGGCAGCAGCAACAGCAAACAGAATTGGACATGGTACCAGGAAGAGATGGACTGGCCAGCTACAATCATTCCCAGGTGGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS CCA 90 bp TGGCGGGAAATCTGGGCCAACATCTGTCCTGCAGAAGCTGATGGCTaGACAATGGTTACAGGAGGGGCTAGGCCACTATTCCTGAAATTC +
Preference number: 5 (lower is better)
Translates to: WREIWANICPAEADG*TMVTGGARPLFLKF
Trigger: GAATTTCAGGAATAGTGGCCTAGCCCCTCCTGTAACCATTGTCCAGCCATCAGCTTCTGCAGGACAGATGTTGGCCCAGATTTCCCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS CCA 90 bp GTTACCTGCAATCTGCCAATGGCCACTAGGCAAAACTTGCTTCCCTaGCCAGCCTCTGGGTCATCATCTGGGAGGGAAACACCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: VTCNLPMATRQNLLP*PASGSSSGRETPSE
Trigger: TTCTGAAGGTGTTTCCCTCCCAGATGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGCCATTGGCAGATTGCAGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478972.2
CDS-3UTR CAA 90 bp CACCCTCTGCTGTCCGTGTCTGGAATTGTCCTGCAGTCTGTCCAGTCTCAGGAGCTCATGTCTGTACAGTaGGGAGAACTAGTTACCTGC +
Preference number: 5 (lower is better)
Translates to: HPLLSVSGIVLQSVQSQELMSVQ*GELVTC
Trigger: GCAGGTAACTAGTTCTCCCAACTGTACAGACATGAG...CTCCTGAGACTGGACAGACTGCAGGACAATTCCAGACACGGACAGCAGAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS-3UTR CAA 90 bp TCAAGTCCCGACTCTTCCCCTCTCTCCCAAGAACCCAGGCAACGCCCACCCCAAAAGAGGGCTTCGTATTaGGTTTACACTCCAACAATG +
Preference number: 5 (lower is better)
Translates to: SSPDSSPLSQEPRQRPPQKRASY*VYTPTM
Trigger: CATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTT...TTGGGGTGGGCGTTGCCTGGGTTCTTGGGAGAGAGGGGAAGAGTCGGGACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR CAA 90 bp CACTGTGATTTTCCCTGGCAAGTCTCTCTTTATCCGCAGAGCTCTGCTCATCATGCCAAGATCGCACCATaGCACTCAAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: HCDFPWQVSLYPQSSAHHAKIAP*HSSLGD
Trigger: GTCGCCCAGGCTTGAGTGCAATGGTGCGATCTTGGC...ATGATGAGCAGAGCTCTGCGGATAAAGAGAGACTTGCCAGGGAAAATCACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR CAA 90 bp ATCATCCGACCTGGCAAACCGCTCCTTATCGTTAGACATCTGATCATCATCACAGCTGAGGCAGGAGAATaGCTGGAACCCGGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: IIRPGKPLLIVRHLIIITAEAGE*LEPGRW
Trigger: CCACCTCCCGGGTTCCAGCAATTCTCCTGCCTCAGC...TGTGATGATGATCAGATGTCTAACGATAAGGAGCGGTTTGCCAGGTCGGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS-3UTR CAA 90 bp CTTTATCCGCAGAGCTCTGCTCATCATCCGACCTGGCAAACCGCTCCTTATCGTAATGGCTCCTCCACCTaGAATTCCAGGTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LYPQSSAHHPTWQTAPYRNGSST*NSRSRV
Trigger: AACTCTGGACCTGGAATTCAAGGTGGAGGAGCCATT...ACGATAAGGAGCGGTTTGCCAGGTCGGATGATGAGCAGAGCTCTGCGGATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS CCA 90 bp GGGTTCTGGAAAGTAAAGGAGCTGGTTCTCATCCAGAGCCATTCTTaGTTCTTAGACCGGAACCGGAACATGACAGACAGCACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: GFWKVKELVLIQSHS*FLDRNRNMTDSTWP
Trigger: AGGCCAAGTGCTGTCTGTCATGTTCCGGTTCCGGTCTAAGAACCAAGAATGGCTCTGGATGAGAACCAGCTCCTTTACTTTCCAGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS-3UTR CAA 90 bp TACCTGAGGAAGGTAAAGGGTGAGGGTAGTAACCTGTATCCGCATTTATATGGCCCATCAGTGGATGTGTaGCCAGTTCCCCGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: YLRKVKGEGSNLYPHLYGPSVDV*PVPRKD
Trigger: GTCCTTGCGGGGAACTGGCAACACATCCACTGATGG...GCCATATAAATGCGGATACAGGTTACTACCCTCACCCTTTACCTTCCTCAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAGCTCCTTGGGTGGGGTaGGAGTGGCGGGAAATCTGG +
Preference number: 5 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPAPWVG*EWREIW
Trigger: CCAGATTTCCCGCCACTCCAACCCCACCCAAGGAGC...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGGCTCCTTGGGTGGGGTaGGAGTGGCGGGAAATCTGG +
Preference number: 5 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPAPWVG*EWREIW
Trigger: CCAGATTTCCCGCCACTCCAACCCCACCCAAGGAGC...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp GGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATTACCAAGTGACCCTGTaGAGATGGGTGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GESTKSSSNPALSLNVFDYQVTL*RWVSRP
Trigger: GGGCCTGGACACCCATCTCAACAGGGTCACTTGGTA...ATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp AATCCAGAAAAGGACATACTGGGGGAAGGCATCCAGATGTGCCCTAGTGGTTTTGTAGGAGGGAATGTGTaGCCCTGGGAGAATAGCTGT +
Preference number: 5 (lower is better)
Translates to: NPEKDILGEGIQMCPSGFVGGNV*PWENSC
Trigger: ACAGCTATTCTCCCAGGGCAACACATTCCCTCCTAC...AAAACCACTAGGGCACATCTGGATGCCTTCCCCCAGTATGTCCTTTTCTGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR CAA 90 bp ACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACGGGTCCAAGTTGGGGTaGCTCCTTGGGTGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: TLQEGFVFGLHSNNEDFHGSKLG*LLGWGW
Trigger: CCAACCCCACCCAAGGAGCAACCCCAACTTGGACCC...GTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCCTCAGGCTGGCCAGGTaGCTGTGCTGGCGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSLRLAR*LCWRLL
Trigger: CAACAACCGCCAGCACAGCAACCTGGCCAGCCTGAG...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS TCA 90 bp GATTCCAGACTCTCTCAGAACTATAAGTCCCAGAGACCTGATCAGTaGGGAAAGACGGCTTATAGGAGCCATCAGTGGATGTGTTGCCAG +
Preference number: 5 (lower is better)
Translates to: DSRLSQNYKSQRPDQ*GKTAYRSHQWMCCQ
Trigger: CTGGCAACACATCCACTGATGGCTCCTATAAGCCGTCTTTCCTCACTGATCAGGTCTCTGGGACTTATAGTTCTGAGAGAGTCTGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505979.5
CDS GCA 90 bp GAAGTTTATCCACATCATCTGGGTGCACCTGATCATAGAGTGTGCTaGCAAACCATTCAGACTGTGGCTGGTTCAAAACAGGAGTCACGG +
Preference number: 5 (lower is better)
Translates to: EVYPHHLGAPDHRVC*QTIQTVAGSKQESR
Trigger: CCGTGACTCCTGTTTTGAACCAGCCACAGTCTGAATGGTTTGGCAGCACACTCTATGATCAGGTGCACCCAGATGATGTGGATAAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000468970.1
ENST00000471844.6
ENST00000505755.5
ENST00000515192.5
CDS-3UTR CAA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGCCATCAGTGGATGTGTaGCCAGTTCCCCGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPPSVDV*PVPRKD
Trigger: GTCCTTGCGGGGAACTGGCAACACATCCACTGATGG...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCACCATCAGTGGATGTGTaGCCAGTTCCCCGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPPSVDV*PVPRKD
Trigger: GTCCTTGCGGGGAACTGGCAACACATCCACTGATGG...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACAGTTGGGGTTGCTCCTaGGGTGGGGTTGGAGTGGCG +
Preference number: 5 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYSWGCS*GGVGVA
Trigger: CGCCACTCCAACCCCACCCAAGGAGCAACCCCAACT...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp TTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACAGTTGGGGTTGCTCCTaGGGTGGGGTTGGAGTGGCG +
Preference number: 5 (lower is better)
Translates to: LLKPHIYLQCFMVLKYEDSWGCS*GGVGVA
Trigger: CGCCACTCCAACCCCACCCAAGGAGCAACCCCAACT...GTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTTACCAAGTGACCCTGTaGAGATGGGTGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTYQVTL*RWVSRP
Trigger: GGGCCTGGACACCCATCTCAACAGGGTCACTTGGTA...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS GCA 90 bp CACGAAGTTTATCCACATCATCTGGGTGCACCTGATCATAGAGTGTaGTGCCAAACCATTCAGACTGTGGCTGGTTCAAAACAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: HEVYPHHLGAPDHRV*CQTIQTVAGSKQES
Trigger: TGACTCCTGTTTTGAACCAGCCACAGTCTGAATGGTTTGGCAGCACACTCTATGATCAGGTGCACCCAGATGATGTGGATAAACTTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000468970.1
ENST00000471844.6
ENST00000505755.5
ENST00000515192.5
CDS CCA 90 bp ATTCCTGCATCTGTTCCTCACAAAGCTCAGCCTATTCACAGAAACTaGGTCCACAGAGCTACTGCCACACCTCATTCGGCAAATAAACGA +
Preference number: 5 (lower is better)
Translates to: IPASVPHKAQPIHRN*VHRATATPHSANKR
Trigger: TCGTTTATTTGCCGAATGAGGTGTGGCAGTAGCTCTGTGGACCCAGTTTCTGTGAATAGGCTGAGCTTTGTGAGGAACAGATGCAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000468970.1
ENST00000471844.6
ENST00000505755.5
ENST00000512296.5
ENST00000515192.5
CDS-3UTR CAA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCGGCCTCTGGATTGTGTaGGAGAGTGTAGGCCGTGGT +
Preference number: 5 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSGLWIV*ESVGRG
Trigger: ACCACGGCCTACACTCTCCAACACAATCCAGAGGCC...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTGTTCTGGTCCTGTGGTaGTCACAGGCTGAACCACCT +
Preference number: 5 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTVLVLW*SQAEPP
Trigger: AGGTGGTTCAGCCTGTGACAACCACAGGACCAGAAC...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCGGGTCCAAGTTGGGGTaGCTCCTTGGGTGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLGSKLG*LLGWGW
Trigger: CCAACCCCACCCAAGGAGCAACCCCAACTTGGACCC...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACTGTCCGTGTCTGGAATaGTCCTGCAGTCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDCPCLE*SCSLSS
Trigger: ACTGGACAGACTGCAGGACAATTCCAGACACGGACA...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp GGTGAGAGCACCAAAAGCAGCAGTAACCCAGCTTTATCACTGAATGTGTTCGATTTGCTGTGCTGGCGGTaGTTGAACATGTTGCTCACT +
Preference number: 5 (lower is better)
Translates to: GESTKSSSNPALSLNVFDLLCWR*LNMLLT
Trigger: AGTGAGCAACATGTTCAACAACCGCCAGCACAGCAA...ATCGAACACATTCAGTGATAAAGCTGGGTTACTGCTGCTTTTGGTGCTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCTCAGGCTGGCCAGGTaGCTGTGCTGGCGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTLRLAR*LCWRLL
Trigger: CAACAACCGCCAGCACAGCAACCTGGCCAGCCTGAG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS TCA 90 bp CACAGAGCTACTGCCACACCTCATTCGGCAAATAAACGATCTCCTTaGGCCCATACACATTCTCATGGAAGACTGCTGACCTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: HRATATPHSANKRSP*AHTHSHGRLLTFLF
Trigger: AAAAAGGAAGGTCAGCAGTCTTCCATGAGAATGTGTATGGGCTCAAGGAGATCGTTTATTTGCCGAATGAGGTGTGGCAGTAGCTCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000468970.1
ENST00000471844.6
ENST00000505755.5
ENST00000512296.5
ENST00000515192.5
CDS-3UTR CAA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACGCCACTAGGCAAAACTaGCTTCCCTGGCCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYATRQN*LPWPAS
Trigger: AGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGC...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCACATGTCCAATTCTGTTaGCTGTTGCTGCTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPHVQFC*LLLLPG
Trigger: CCCAGGCAGCAGCAACAGCAAACAGAATTGGACATG...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTGTTCTGGTCCTGTGGTaGTCACAGGCTGAACCACCT +
Preference number: 5 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSVLVLW*SQAEPP
Trigger: AGGTGGTTCAGCCTGTGACAACCACAGGACCAGAAC...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp CCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTGACTTCTCAAGGGGCTaGCTGTGTTCTGGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: PMLKLAKAPYIPTMFHGPDFSRG*LCSGPV
Trigger: CACAGGACCAGAACACAGCAAGCCCCTTGAGAAGTC...AGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGCTCCTTGGGTGGGGTaGGAGTGGCGGGAAATCTGG +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNAPWVG*EWREIW
Trigger: CCAGATTTCCCGCCACTCCAACCCCACCCAAGGAGC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACAGTTGGGGTTGCTCCTaGGGTGGGGTTGGAGTGGCG +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNSWGCS*GGVGVA
Trigger: CGCCACTCCAACCCCACCCAAGGAGCAACCCCAACT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGGGTCCAAGTTGGGGTaGCTCCTTGGGTGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNGSKLG*LLGWGW
Trigger: CCAACCCCACCCAAGGAGCAACCCCAACTTGGACCC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CAA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACTTGCTGTGCTGGCGGTaGTTGAACATGTTGCTCACT +
Preference number: 5 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDLLCWR*LNMLLT
Trigger: AGTGAGCAACATGTTCAACAACCGCCAGCACAGCAA...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCTCAGGCTGGCCAGGTaGCTGTGCTGGCGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNLRLAR*LCWRLL
Trigger: CAACAACCGCCAGCACAGCAACCTGGCCAGCCTGAG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAACTCAGGCTGGCCAGGTaGCTGTGCTGGCGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTELRLAR*LCWRLL
Trigger: CAACAACCGCCAGCACAGCAACCTGGCCAGCCTGAG...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGTGTAGGCCGTGGTTCTaGGCTAGAGTTCCTGTTGGA +
Preference number: 5 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWCRPWF*ARVPVG
Trigger: TCCAACAGGAACTCTAGCCAAGAACCACGGCCTACA...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS-3UTR CAA 90 bp TCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTGCCACTAGGCAAAACTaGCTTCCCTGGCCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: SLNVFDNRQSYQQPTFYIATRQN*LPWPAS
Trigger: AGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGC...AATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp ATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCGCCACTAGGCAAAACTaGCTTCCCTGGCCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: IYTYNVSWSSNMRTFLLSATRQN*LPWPAS
Trigger: AGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGC...GGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGCCACTAGGCAAAACTaGCTTCCCTGGCCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTATRQN*LPWPAS
Trigger: AGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCCATCCAGAGCCATTCTaGGTTCTTAGACCGGAACCG +
Preference number: 5 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSHPEPF*VLRPEP
Trigger: CGGTTCCGGTCTAAGAACCAAGAATGGCTCTGGATG...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp TGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCTTTACAGGGCCTCTGGATTGTGTaGGAGAGTGTAGGCCGTGGT +
Preference number: 5 (lower is better)
Translates to: CSITDNRINSRLSIFALQGLWIV*ESVGRG
Trigger: ACCACGGCCTACACTCTCCAACACAATCCAGAGGCC...CTGTAAAGCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGGCCTCTGGATTGTGTaGGAGAGTGTAGGCCGTGGT +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTGLWIV*ESVGRG
Trigger: ACCACGGCCTACACTCTCCAACACAATCCAGAGGCC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTGTAGGAGGGAATGTGTaGCCCTGGGAGAATAGCTGT +
Preference number: 5 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSVGGNV*PWENSC
Trigger: ACAGCTATTCTCCCAGGGCAACACATTCCCTCCTAC...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp ATGAAAGAGGCTACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATTGTCCGTGTCTGGAATaGTCCTGCAGTCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: MKEATLQEGFVFGLHSNNCPCLE*SCSLSS
Trigger: ACTGGACAGACTGCAGGACAATTCCAGACACGGACA...ATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGTTGCTGTGCTGGCGGTaGTTGAACATGTTGCTCACT +
Preference number: 5 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWLLCWR*LNMLLT
Trigger: AGTGAGCAACATGTTCAACAACCGCCAGCACAGCAA...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCCATCAGTGGATGTGTaGCCAGTTCCCCGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNPSVDV*PVPRKD
Trigger: GTCCTTGCGGGGAACTGGCAACACATCCACTGATGG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGCTCATGTCTGTACAGTaGGGAGAACTAGTTACCTGC +
Preference number: 5 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPLMSVQ*GELVTC
Trigger: GCAGGTAACTAGTTCTCCCAACTGTACAGACATGAG...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCACTCATGTCTGTACAGTaGGGAGAACTAGTTACCTGC +
Preference number: 5 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPLMSVQ*GELVTC
Trigger: GCAGGTAACTAGTTCTCCCAACTGTACAGACATGAG...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACCATCCAGAGCCATTCTaGGTTCTTAGACCGGAACCG +
Preference number: 5 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYHPEPF*VLRPEP
Trigger: CGGTTCCGGTCTAAGAACCAAGAATGGCTCTGGATG...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCATGTAGGCCGTGGTTCTaGGCTAGAGTTCTTCACATT +
Preference number: 5 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPCRPWF*ARVLHI
Trigger: AATGTGAAGAACTCTAGCCAAGAACCACGGCCTACA...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp CCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCTGTGCTGGCGGTTGTaGAACATGTTGCTCACTAGA +
Preference number: 5 (lower is better)
Translates to: PMLKLAKAPYIPTMFHGPLCWRL*NMLLTR
Trigger: TCTAGTGAGCAACATGTTCAACAACCGCCAGCACAG...AGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TATTTGCTTTACAGTTGTATATTGGCTGGGCATGGATGCAAGCGCAGCAAAGACCTTCTAACCTGCCTCTaGATCTCAGCACAAATCAAC +
Preference number: 5 (lower is better)
Translates to: YLLYSCILAGHGCKRSKDLLTCL*ISAQIN
Trigger: GTTGATTTGTGCTGAGATCAAGAGGCAGGTTAGAAG...GTCTTTGCTGCGCTTGCATCCATGCCCAGCCAATATACAACTGTAAAGCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TTCTTTCCAGAGGGACTGCTCACAGGCAGCAAAAAGAGCCTATGCTCAAACTTGATATTTGCTTTACAGTaGTATATTGGCTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: FFPEGLLTGSKKSLCSNLIFALQ*YIGWAW
Trigger: CCATGCCCAGCCAATATACAACTGTAAAGCAAATAT...CAAGTTTGAGCATAGGCTCTTTTTGCTGCCTGTGAGCAGTCCCTCTGGAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS TCA 90 bp GTGAAGATACCCTCAATGTTGTGTCGGGAGATGAACTCTGTTGGTTaGCAAACATTACTCATGTCTGTACAGTTGGGAGAACTAGTTACC +
Preference number: 5 (lower is better)
Translates to: VKIPSMLCREMNSVG*QTLLMSVQLGELVT
Trigger: GGTAACTAGTTCTCCCAACTGTACAGACATGAGTAATGTTTGTCAACCAACAGAGTTCATCTCCCGACACAACATTGAGGGTATCTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000478972.2
ENST00000505755.5
ENST00000515192.5
CDS TCA 90 bp TCAAAAATTTACTGTTCCCTTCTCCATCATCATCAAAATCCAGCCTaGGGAAAGCCAACAATAAATACTTTAAGCCTGCCTGGTCGCCGC +
Preference number: 5 (lower is better)
Translates to: SKIYCSLLHHHQNPA*GKPTINTLSLPGRR
Trigger: GCGGCGACCAGGCAGGCTTAAAGTATTTATTGTTGGCTTTCCTCAGGCTGGATTTTGATGATGATGGAGAAGGGAACAGTAAATTTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497108.6
CDS-3UTR CAA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACAATGGCTCCTCCACCTaGAATTCCAGGTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYNGSST*NSRSRV
Trigger: AACTCTGGACCTGGAATTCAAGGTGGAGGAGCCATT...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp ATCTTTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAAGATACCCTCAATGTaGTGTCGGGAGATGAACTCT +
Preference number: 5 (lower is better)
Translates to: IFMAKSRVPESVYLASLFKIPSM*CREMNS
Trigger: AGAGTTCATCTCCCGACACAACATTGAGGGTATCTT...AAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAAAGATACCCTCAATGTaGTGTCGGGAGATGAACTCT +
Preference number: 5 (lower is better)
Translates to: SYLVYTPTMRIFTGTANPKIPSM*CREMNS
Trigger: AGAGTTCATCTCCCGACACAACATTGAGGGTATCTT...TGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCATCCAGAGCCATTCTaGGTTCTTAGACCGGAACCG +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTHPEPF*VLRPEP
Trigger: CGGTTCCGGTCTAAGAACCAAGAATGGCTCTGGATG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CAA 90 bp ACTTTGCAAGAGGGCTTCGTATTTGGTTTACACTCCAACAATGAGGATTTTCACTGTAGGCCGTGGTTCTaGGCTAGAGTTCTTCACATT +
Preference number: 5 (lower is better)
Translates to: TLQEGFVFGLHSNNEDFHCRPWF*ARVLHI
Trigger: AATGTGAAGAACTCTAGCCAAGAACCACGGCCTACA...GTGAAAATCCTCATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTTGCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCATGTCCAATTCTGTTaGCTGTTGCTGCTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLHVQFC*LLLLPG
Trigger: CCCAGGCAGCAGCAACAGCAAACAGAATTGGACATG...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGTTCTGGTCCTGTGGTaGTCACAGGCTGAACCACCT +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNVLVLW*SQAEPP
Trigger: AGGTGGTTCAGCCTGTGACAACCACAGGACCAGAAC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CAA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAAGACTTCTCAAGGGGCTaGCTGTGTTCTGGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTEDFSRG*LCSGPV
Trigger: CACAGGACCAGAACACAGCAAGCCCCTTGAGAAGTC...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGACTTCTCAAGGGGCTaGCTGTGTTCTGGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNDFSRG*LCSGPV
Trigger: CACAGGACCAGAACACAGCAAGCCCCTTGAGAAGTC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCGTAGGAGGGAATGTGTaGCCCTGGGAGAATAGCTGT +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTVGGNV*PWENSC
Trigger: ACAGCTATTCTCCCAGGGCAACACATTCCCTCCTAC...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTGTCCGTGTCTGGAATaGTCCTGCAGTCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTCPCLE*SCSLSS
Trigger: ACTGGACAGACTGCAGGACAATTCCAGACACGGACA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp TTGCTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACCTGTGCTGGCGGTTGTaGAACATGTTGCTCACTAGA +
Preference number: 5 (lower is better)
Translates to: LLKPHIYLQCFMVLKYEDLCWRL*NMLLTR
Trigger: TCTAGTGAGCAACATGTTCAACAACCGCCAGCACAG...GTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp ACCTGTATCCGCATTTATATGGCTATTGTTAATTACCAAGTGACCCTGTTGAGACTGTGCTGGCGGTTGTaGAACATGTTGCTCACTAGA +
Preference number: 5 (lower is better)
Translates to: TCIRIYMAIVNYQVTLLRLCWRL*NMLLTR
Trigger: TCTAGTGAGCAACATGTTCAACAACCGCCAGCACAG...TCTCAACAGGGTCACTTGGTAATTAACAATAGCCATATAAATGCGGATACAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp GGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAACTTCTAACCTGCCTCTaGATCTCAGCACAAATCAAC +
Preference number: 5 (lower is better)
Translates to: GHGCKRSKDVYLNILWLQLLTCL*ISAQIN
Trigger: GTTGATTTGTGCTGAGATCAAGAGGCAGGTTAGAAG...TTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGCTTCTAACCTGCCTCTaGATCTCAGCACAAATCAAC +
Preference number: 5 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPLLTCL*ISAQIN
Trigger: GTTGATTTGTGCTGAGATCAAGAGGCAGGTTAGAAG...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TTTTTACTCCACTACCTGGCACCAGACTGGAGACATAAGGAAGGGAAACTCAGCAGACTTAAATCTCAGTaGCTTGCTAAACTGGGTATT +
Preference number: 5 (lower is better)
Translates to: FLLHYLAPDWRHKEGKLSRLKSQ*LAKLGI
Trigger: AATACCCAGTTTAGCAAGCAACTGAGATTTAAGTCT...GCTGAGTTTCCCTTCCTTATGTCTCCAGTCTGGTGCCAGGTAGTGGAGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTAATGGCTCCTCCACCTaGAATTCCAGGTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDINGSST*NSRSRV
Trigger: AACTCTGGACCTGGAATTCAAGGTGGAGGAGCCATT...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TCTTCAGAATTTCTTTCCAAAAACAAGCCATACTATCCAAGGCAAACAGTGGATAATGGCTCCTCCACCTaGAATTCCAGGTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: SSEFLSKNKPYYPRQTVDNGSST*NSRSRV
Trigger: AACTCTGGACCTGGAATTCAAGGTGGAGGAGCCATT...ATCCACTGTTTGCCTTGGATAGTATGGCTTGTTTTTGGAAAGAAATTCTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTCGTAAGATGGTTAGCTaGTCTGGTTTTCGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SLNVFDNRQSYQQPTFYIRKMVS*SGFRAR
Trigger: CCTGGCTCGAAAACCAGACAAGCTAACCATCTTACG...AATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCGTAAGATGGTTAGCTaGTCTGGTTTTCGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTRKMVS*SGFRAR
Trigger: CCTGGCTCGAAAACCAGACAAGCTAACCATCTTACG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp TGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCTTTACAGCGTAAGATGGTTAGCTaGTCTGGTTTTCGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: CSITDNRINSRLSIFALQRKMVS*SGFRAR
Trigger: CCTGGCTCGAAAACCAGACAAGCTAACCATCTTACG...CTGTAAAGCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTAAGATACCCTCAATGTaGTGTCGGGAGATGAACTCT +
Preference number: 5 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSKIPSM*CREMNS
Trigger: AGAGTTCATCTCCCGACACAACATTGAGGGTATCTT...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTAGAGTTCTTCACATaGGTGTTGGTACAGATGATG +
Preference number: 5 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWLEFFT*VLVQMM
Trigger: CATCATCTGTACCAACACCAATGTGAAGAACTCTAG...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCATGTCCAATTCTGTTaGCTGTTGCTGCTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNHVQFC*LLLLPG
Trigger: CCCAGGCAGCAGCAACAGCAAACAGAATTGGACATG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CAA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTAGCCTATGCTCAAACTaGCTAAAGCCCCATATATAC +
Preference number: 5 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTSLCSN*LKPHIY
Trigger: GTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCT...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGAATCGGGGACAAATTTaGCATAACTCCCTAATAGGG +
Preference number: 5 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPNRGQI*HNSLIG
Trigger: CCCTATTAGGGAGTTATGCAAAATTTGTCCCCGATT...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTATGAAAGAGGCTACTTaGCAAGAGGGCTTCGTATTT +
Preference number: 5 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTMKEAT*QEGFVF
Trigger: AAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS CCA 90 bp AAAAGTGAAGATACCCTCAATGTTGTGTCGGGAGATGAACTCTGTTaGTTGACAAACATTACTCATGTCTGTACAGTTGGGAGAACTAGT +
Preference number: 5 (lower is better)
Translates to: KSEDTLNVVSGDELC*LTNITHVCTVGRTS
Trigger: ACTAGTTCTCCCAACTGTACAGACATGAGTAATGTTTGTCAACCAACAGAGTTCATCTCCCGACACAACATTGAGGGTATCTTCACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000478972.2
ENST00000505755.5
ENST00000515192.5
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACAATGGCTCCTCCACCTaGAATTCCAGGTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNNGSST*NSRSRV
Trigger: AACTCTGGACCTGGAATTCAAGGTGGAGGAGCCATT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCGTAAGATGGTTAGCTaGTCTGGTTTTCGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNRKMVS*SGFRAR
Trigger: CCTGGCTCGAAAACCAGACAAGCTAACCATCTTACG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCTCATGTCTGTACAGTaGGGAGAACTAGTTACCTGC +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTLMSVQ*GELVTC
Trigger: GCAGGTAACTAGTTCTCCCAACTGTACAGACATGAG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp ACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCACTGATGAACTCTGTTGGTaGACAAACATTACTCATGTC +
Preference number: 5 (lower is better)
Translates to: TYNVSWSSNMRTFLLSSTDELCW*TNITHV
Trigger: GACATGAGTAATGTTTGTCAACCAACAGAGTTCATC...AGTGGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TTGGCTGGGCATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGGATGAACTCTGTTGGTaGACAAACATTACTCATGTC +
Preference number: 5 (lower is better)
Translates to: LAGHGCKRSKDVYLNILWDELCW*TNITHV
Trigger: GACATGAGTAATGTTTGTCAACCAACAGAGTTCATC...CCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATGCCCAGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCTGTAGGCCGTGGTTCTaGGCTAGAGTTCTTCACATT +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTCRPWF*ARVLHI
Trigger: AATGTGAAGAACTCTAGCCAAGAACCACGGCCTACA...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CAA 90 bp AACCCAGCTTTATCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGAGATTTCTGAAAATCTaGGATCTCTATCCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: NPALSLNVFDNRQSYQQPRFLKI*DLYPGQ
Trigger: TTGCCCAGGATAGAGATCCAAGATTTTCAGAAATCT...CGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGATAAAGCTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACCTGTGCTGGCGGTTGTaGAACATGTTGCTCACTAGA +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNLCWRL*NMLLTR
Trigger: TCTAGTGAGCAACATGTTCAACAACCGCCAGCACAG...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTGCTGTGCTGGCGGTaGTTGAACATGTTGCTCACT +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNLLCWR*LNMLLT
Trigger: AGTGAGCAACATGTTCAACAACCGCCAGCACAGCAA...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp ATCTTTATGGCCAAGTCTCGGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTACAGTCCTAAAAGCCTaGGAGATTCATTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: IFMAKSRVPESVYLASLFTVLKA*EIHSIS
Trigger: AGAAATGGAATGAATCTCCAAGGCTTTTAGGACTGT...AAATAGGCTGGCAAGATAAACACTTTCTGGAACCCGAGACTTGGCCATAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACCTTTACAGTTGTATATaGGCTGGGCATGGATGCAAG +
Preference number: 5 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYLYSCI*AGHGCK
Trigger: CTTGCATCCATGCCCAGCCAATATACAACTGTAAAG...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp AGCAAAAAGAGCCTATGCTCAAACTTGCTAAAGCCCCATATATACCTACAATGTCTTTACAGTTGTATATaGGCTGGGCATGGATGCAAG +
Preference number: 5 (lower is better)
Translates to: SKKSLCSNLLKPHIYLQCLYSCI*AGHGCK
Trigger: CTTGCATCCATGCCCAGCCAATATACAACTGTAAAG...ACATTGTAGGTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCTCTTTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCATGAAAGAGGCTACTTaGCAAGAGGGCTTCGTATTT +
Preference number: 5 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSMKEAT*QEGFVF
Trigger: AAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCTCCCTCATTAATTCAGTCTaGCACTTTAGCTACTGGCCA +
Preference number: 5 (lower is better)
Translates to: YTYNVSWSSNMRTFLLSSLINSV*HFSYWP
Trigger: TGGCCAGTAGCTAAAGTGCAAGACTGAATTAATGAG...GGAGGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTTATAGATTCCTCTGGTaGTGGGTGCCTGTTGTTTAT +
Preference number: 5 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSYRFLW*WVPVVY
Trigger: ATAAACAACAGGCACCCACAACCAGAGGAATCTATA...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS CCA 90 bp TTCAGCAAACAGAAACCATGTTCTATGACACAGGGGTCATCTTGTTaGGTTCTAACTCCTTCTAGGTATTCAAAACCTGGTTATTGTGAA +
Preference number: 5 (lower is better)
Translates to: FSKQKPCSMTQGSSC*VLTPSRYSKPGYCE
Trigger: TTCACAATAACCAGGTTTTGAATACCTAGAAGGAGTTAGAACCCAACAAGATGACCCCTGTGTCATAGAACATGGTTTCTGTTTGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510273.1
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCAAGATACCCTCAATGTaGTGTCGGGAGATGAACTCT +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTKIPSM*CREMNS
Trigger: AGAGTTCATCTCCCGACACAACATTGAGGGTATCTT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCTTCTAACCTGCCTCTaGATCTCAGCACAAATCAAC +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTLLTCL*ISAQIN
Trigger: GTTGATTTGTGCTGAGATCAAGAGGCAGGTTAGAAG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp TGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTTGCTTTACAGCTTTACAGTTGTATATaGGCTGGGCATGGATGCAAG +
Preference number: 5 (lower is better)
Translates to: CSITDNRINSRLSIFALQLYSCI*AGHGCK
Trigger: CTTGCATCCATGCCCAGCCAATATACAACTGTAAAG...CTGTAAAGCAAATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACAAGAGGGCTTCGTATTaGGTTTACACTCCAACAATG +
Preference number: 5 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYKRASY*VYTPTM
Trigger: CATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTT...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TATTTGGTTTACACTCCAACAATGAGGATTTTCACTGGGACGGCTAATCCAAGACAATGTGCCTTATGTTaGTATGTCTGGAGCTTAAAC +
Preference number: 5 (lower is better)
Translates to: YLVYTPTMRIFTGTANPRQCALC*YVWSLN
Trigger: GTTTAAGCTCCAGACATACAAACATAAGGCACATTG...TCTTGGATTAGCCGTCCCAGTGAAAATCCTCATTGTTGGAGTGTAAACCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358595.10
CDS-3UTR CAA 90 bp ATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCCTAGAGTTCTTCACATaGGTGTTGGTACAGATGATG +
Preference number: 5 (lower is better)
Translates to: IYTYNVSWSSNMRTFLLSLEFFT*VLVQMM
Trigger: CATCATCTGTACCAACACCAATGTGAAGAACTCTAG...GGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCCTAGAGTTCTTCACATaGGTGTTGGTACAGATGATG +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTLEFFT*VLVQMM
Trigger: CATCATCTGTACCAACACCAATGTGAAGAACTCTAG...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CAA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACAGATTTCTGAAAATCTaGGATCTCTATCCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYRFLKI*DLYPGQ
Trigger: TTGCCCAGGATAGAGATCCAAGATTTTCAGAAATCT...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354396.6
ENST00000358595.10
CDS-3UTR CAA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACACAGTCCTAAAAGCCTaGGAGATTCATTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYTVLKA*EIHSIS
Trigger: AGAAATGGAATGAATCTCCAAGGCTTTTAGGACTGT...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp ATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCCAGCCTATGCTCAAACTaGCTAAAGCCCCATATATAC +
Preference number: 5 (lower is better)
Translates to: IYTYNVSWSSNMRTFLLSSLCSN*LKPHIY
Trigger: GTATATATGGGGCTTTAGCAAGTTTGAGCATAGGCT...GGAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TCTTCAGAATTTCTTTCCAAAAACAAGCCATACTATCCAAGGCAAACAGTGGATAATCGGGGACAAATTTaGCATAACTCCCTAATAGGG +
Preference number: 5 (lower is better)
Translates to: SSEFLSKNKPYYPRQTVDNRGQI*HNSLIG
Trigger: CCCTATTAGGGAGTTATGCAAAATTTGTCCCCGATT...ATCCACTGTTTGCCTTGGATAGTATGGCTTGTTTTTGGAAAGAAATTCTGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTAATCGGGGACAAATTTaGCATAACTCCCTAATAGGG +
Preference number: 5 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDINRGQI*HNSLIG
Trigger: CCCTATTAGGGAGTTATGCAAAATTTGTCCCCGATT...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTCAGAAAGTGTTTATCTaGCCAGCCTATTTAGGTAAT +
Preference number: 5 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSQKVFI*PAYLGN
Trigger: ATTACCTAAATAGGCTGGCAAGATAAACACTTTCTG...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCATGAAAGAGGCTACTTaGCAAGAGGGCTTCGTATTT +
Preference number: 5 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLMKEAT*QEGFVF
Trigger: AAATACGAAGCCCTCTTGCAAAGTAGCCTCTTTCAT...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp GGGTTCCAGAAAGTGTTTATCTTGCCAGCCTATTTAGGTAATGTTTGCAGATCTAGACTTAAATCTCAGTaGCTTGCTAAACTGGGTATT +
Preference number: 5 (lower is better)
Translates to: GFQKVFILPAYLGNVCRSRLKSQ*LAKLGI
Trigger: AATACCCAGTTTAGCAAGCAACTGAGATTTAAGTCT...AGATCTGCAAACATTACCTAAATAGGCTGGCAAGATAAACACTTTCTGGAACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp TCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTCTCATTAATTCAGTCTaGCACTTTAGCTACTGGCCA +
Preference number: 5 (lower is better)
Translates to: SLNVFDNRQSYQQPTFYILINSV*HFSYWP
Trigger: TGGCCAGTAGCTAAAGTGCAAGACTGAATTAATGAG...AATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCGATGAACTCTGTTGGTaGACAAACATTACTCATGTC +
Preference number: 5 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLDELCW*TNITHV
Trigger: GACATGAGTAATGTTTGTCAACCAACAGAGTTCATC...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCAGATTTCTGAAAATCTaGGATCTCTATCCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTRFLKI*DLYPGQ
Trigger: TTGCCCAGGATAGAGATCCAAGATTTTCAGAAATCT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000515192.5
CDS-3UTR CAA 90 bp CTAAAGCCCCATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTACAGTCCTAAAAGCCTaGGAGATTCATTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: LKPHIYLQCFMVLKYEDITVLKA*EIHSIS
Trigger: AGAAATGGAATGAATCTCCAAGGCTTTTAGGACTGT...AATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATGGGGCTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp AACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACTTCACCACAGTCCTAAAAGCCTaGGAGATTCATTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: NTIQFQVRRHKERCFNFTTVLKA*EIHSIS
Trigger: AGAAATGGAATGAATCTCCAAGGCTTTTAGGACTGT...GGTGAAGTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp TCACTGAATGTGTTCGATAACAGACAATCGTATCAACAGCCGACTTTCTATATTATATTTGCTTTACAGTaGTATATTGGCTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: SLNVFDNRQSYQQPTFYIIFALQ*YIGWAW
Trigger: CCATGCCCAGCCAATATACAACTGTAAAGCAAATAT...AATATAGAAAGTCGGCTGTTGATACGATTGTCTGTTATCGAACACATTCAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CATGGATGCAAGCGCAGCAAAGACGTTTATTTAAATATTCTTTGGCTGCAATACCAGAAAGTGTTTATCTaGCCAGCCTATTTAGGTAAT +
Preference number: 5 (lower is better)
Translates to: HGCKRSKDVYLNILWLQYQKVFI*PAYLGN
Trigger: ATTACCTAAATAGGCTGGCAAGATAAACACTTTCTG...GTATTGCAGCCAAAGAATATTTAAATAAACGTCTTTGCTGCGCTTGCATCCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACAAGAGGGCTTCGTATTaGGTTTACACTCCAACAATG +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNKRASY*VYTPTM
Trigger: CATTGTTGGAGTGTAAACCAAATACGAAGCCCTCTT...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CAAATCAACACTATACAATTTCAGGTCAGGAGACATAAGGAAAGGTGTTTTAACGATGAACTCTGTTGGTaGACAAACATTACTCATGTC +
Preference number: 5 (lower is better)
Translates to: QINTIQFQVRRHKERCFNDELCW*TNITHV
Trigger: GACATGAGTAATGTTTGTCAACCAACAGAGTTCATC...GTTAAAACACCTTTCCTTATGTCTCCTGACCTGAAATTGTATAGTGTTGATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000515192.5
CDS-3UTR CAA 90 bp TGGAAAATACCTGGAAGATTTAACTCCTTAGGACTCTTTGAAAAGTACACAGAAATATTTGCTTTACAGTaGTATATTGGCTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: WKIPGRFNSLGLFEKYTEIFALQ*YIGWAW
Trigger: CCATGCCCAGCCAATATACAACTGTAAAGCAAATAT...TTCTGTGTACTTTTCAAAGAGTCCTAAGGAGTTAAATCTTCCAGGTATTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS-3UTR CAA 90 bp CATATATACCTACAATGTTTCATGGTCCTCAAATATGAGGACATTTCTCCTCTCAGACTTAAATCTCAGTaGCTTGCTAAACTGGGTATT +
Preference number: 5 (lower is better)
Translates to: HIYLQCFMVLKYEDISPLRLKSQ*LAKLGI
Trigger: AATACCCAGTTTAGCAAGCAACTGAGATTTAAGTCT...GAGAGGAGAAATGTCCTCATATTTGAGGACCATGAAACATTGTAGGTATATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
CDS CAA 90 bp GCAATGGCTGGACCCAGTGATGGTACATCTGATGTCATTTCGGGGTaGGCAGTAGTCGCCGCCATGGCCGCAGATGCCACCGCCGCCGCG +
Preference number: 6 (lower is better)
Translates to: AMAGPSDGTSDVISG*AVVAAMAADATAAA
Trigger: CGCGGCGGCGGTGGCATCTGCGGCCATGGCGGCGACTACTGCCAACCCCGAAATGACATCAGATGTACCATCACTGGGTCCAGCCATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358595.10
ENST00000471844.6
ENST00000504358.1
ENST00000505755.5
ENST00000505979.5
CDS CCA 72 bp GAGACTAGGGTAGGCAGCAGCACCAGGCGATGCAGTTaGGGCACCAGGGAGGGACATGGAGCTGAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: ETRVGSSTRRCS*GTREGHGAEGG
Trigger: TCCTCCTTCAGCTCCATGTCCCTCCCTGGTGCCCCAACTGCATCGCCTGGTGCTGCTGCCTACCCTAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS GCA 72 bp ATTGGTGAGACTAGGGTAGGCAGCAGCACCAGGCGATaGAGTTGGGGCACCAGGGAGGGACATGGAGCTGAA +
Preference number: 6 (lower is better)
Translates to: IGETRVGSSTRR*SWGTREGHGAE
Trigger: TTCAGCTCCATGTCCCTCCCTGGTGCCCCAACTGCATCGCCTGGTGCTGCTGCCTACCCTAGTCTCACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS CCA 72 bp GTTGCTCCTTGGGTGGGGTTGGAGTGGCGGGAAATCTaGGCCAACATCTGTCCTGCAGAAGCTGATGGCTGG +
Preference number: 6 (lower is better)
Translates to: VAPWVGLEWREI*ANICPAEADGW
Trigger: CCAGCCATCAGCTTCTGCAGGACAGATGTTGGCCCAGATTTCCCGCCACTCCAACCCCACCCAAGGAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS CAA 72 bp GGACCCAGTGATGGTACATCTGATGTCATTTCGGGGTaGGCAGTAGTCGCCGCCATGGCCGCAGATGCCACC +
Preference number: 6 (lower is better)
Translates to: GPSDGTSDVISG*AVVAAMAADAT
Trigger: GGTGGCATCTGCGGCCATGGCGGCGACTACTGCCAACCCCGAAATGACATCAGATGTACCATCACTGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358595.10
ENST00000471844.6
ENST00000504358.1
ENST00000505755.5
ENST00000505979.5
CDS CAA 90 bp CCCTGGTCGCCGCTTAATAGCCCTCTGGACAATGGCTCCTCCACCTaGAATTCCAGGTCCAGAGTTTCCAGAGGCAATGGCTGGACCCAG +
Preference number: 6 (lower is better)
Translates to: PWSPLNSPLDNGSST*NSRSRVSRGNGWTQ
Trigger: CTGGGTCCAGCCATTGCCTCTGGAAACTCTGGACCTGGAATTCAAGGTGGAGGAGCCATTGTCCAGAGGGCTATTAAGCGGCGACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000505755.5
ENST00000505979.5
ENST00000515192.5
CDS CAA 90 bp GCCTGGTCGCCGCTTAATAGCCCTCTGGACAATGGCTCCTCCACCTaGAATTCCAGGTCCAGAGTTTCCAGAGGCAATGGCTGGACCCAG +
Preference number: 6 (lower is better)
Translates to: AWSPLNSPLDNGSST*NSRSRVSRGNGWTQ
Trigger: CTGGGTCCAGCCATTGCCTCTGGAAACTCTGGACCTGGAATTCAAGGTGGAGGAGCCATTGTCCAGAGGGCTATTAAGCGGCGACCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497108.6
CDS CCA 72 bp TGGGGCACCAGGGAGGGACATGGAGCTGAAGGAGGATaGAGTCTGAAAGCTGCCCACACCAAACTGGGAAGT +
Preference number: 6 (lower is better)
Translates to: WGTREGHGAEGG*SLKAAHTKLGS
Trigger: ACTTCCCAGTTTGGTGTGGGCAGCTTTCAGACTCCATCCTCCTTCAGCTCCATGTCCCTCCCTGGTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS CAA 90 bp TCCTGGTCGCCGCTTAATAGCCCTCTGGACAATGGCTCCTCCACCTaGAATTCCAGGTCCAGAGTTTCCAGAGGCAATGGCTGGACCCAG +
Preference number: 6 (lower is better)
Translates to: SWSPLNSPLDNGSST*NSRSRVSRGNGWTQ
Trigger: CTGGGTCCAGCCATTGCCTCTGGAAACTCTGGACCTGGAATTCAAGGTGGAGGAGCCATTGTCCAGAGGGCTATTAAGCGGCGACCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504358.1
CDS CAA 90 bp GGAGAACTAGTTACCTGCAATCTGCCAATGGCCACTAGGCAAAACTaGCTTCCCTGGCCAGCCTCTGGGTCATCATCTGCTGGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: GELVTCNLPMATRQN*LPWPASGSSSAGGQ
Trigger: CTGGCCCCCAGCAGATGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGCCATTGGCAGATTGCAGGTAACTAGTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515192.5
CDS TCA 72 bp CCAGGGAGGGACATGGAGCTGAAGGAGGATGGAGTCTaGAAGCTGCCCACACCAAACTGGGAAGTACGAGTC +
Preference number: 6 (lower is better)
Translates to: PGRDMELKEDGV*KLPTPNWEVRV
Trigger: GACTCGTACTTCCCAGTTTGGTGTGGGCAGCTTTCAGACTCCATCCTCCTTCAGCTCCATGTCCCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS CAA 72 bp GTTACCTGCAATCTGCCAATGGCCACTAGGCAAAACTaGCTTCCCTGGCCAGCCTCTGGGTCATCATCTGGG +
Preference number: 6 (lower is better)
Translates to: VTCNLPMATRQN*LPWPASGSSSG
Trigger: CCCAGATGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGCCATTGGCAGATTGCAGGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000478972.2
ENST00000505755.5
CDS GCA 72 bp TTACCTGCAATCTGCCAATGGCCACTAGGCAAAACTTaGTTCCCTGGCCAGCCTCTGGGTCATCATCTGGGA +
Preference number: 6 (lower is better)
Translates to: LPAICQWPLGKT*FPGQPLGHHLG
Trigger: TCCCAGATGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGCCATTGGCAGATTGCAGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000478972.2
ENST00000505755.5
CDS CCA 72 bp AATCTGCCAATGGCCACTAGGCAAAACTTGCTTCCCTaGCCAGCCTCTGGGTCATCATCTGGGAGGGAAACA +
Preference number: 6 (lower is better)
Translates to: NLPMATRQNLLP*PASGSSSGRET
Trigger: TGTTTCCCTCCCAGATGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGCCATTGGCAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000478972.2
ENST00000505755.5
CDS CAA 72 bp CCGCTTAATAGCCCTCTGGACAATGGCTCCTCCACCTaGAATTCCAGGTCCAGAGTTTCCAGAGGCAATGGC +
Preference number: 6 (lower is better)
Translates to: PLNSPLDNGSST*NSRSRVSRGNG
Trigger: GCCATTGCCTCTGGAAACTCTGGACCTGGAATTCAAGGTGGAGGAGCCATTGTCCAGAGGGCTATTAAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000497108.6
ENST00000504358.1
ENST00000505755.5
ENST00000505979.5
ENST00000515192.5
CDS CAA 72 bp GTTACCTGCAATCTGCCAATGGCCACTAGGCAAAACTaGCTTCCCTGGCCAGCCTCTGGGTCATCATCTGCT +
Preference number: 6 (lower is better)
Translates to: VTCNLPMATRQN*LPWPASGSSSA
Trigger: AGCAGATGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGCCATTGGCAGATTGCAGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515192.5
CDS CAA 90 bp GGAGAACTAGTTACCTGCAATCTGCCAATGGCCACTAGGCAAAACTaGCTTCCCTGGCCAGCCTCTGGGTCATCATCTGGGAGGGAAACA +
Preference number: 6 (lower is better)
Translates to: GELVTCNLPMATRQN*LPWPASGSSSGRET
Trigger: TGTTTCCCTCCCAGATGATGACCCAGAGGCTGGCCAGGGAAGCAAGTTTTGCCTAGTGGCCATTGGCAGATTGCAGGTAACTAGTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000478972.2
ENST00000505755.5
CDS TCA 72 bp CGCTTAATAGCCCTCTGGACAATGGCTCCTCCACCTTaGATTCCAGGTCCAGAGTTTCCAGAGGCAATGGCT +
Preference number: 6 (lower is better)
Translates to: RLIALWTMAPPP*IPGPEFPEAMA
Trigger: AGCCATTGCCTCTGGAAACTCTGGACCTGGAATTCAAGGTGGAGGAGCCATTGTCCAGAGGGCTATTAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000497108.6
ENST00000504358.1
ENST00000505755.5
ENST00000505979.5
ENST00000515192.5
CDS CCA 72 bp TTGTGGCCTCTGGATTGTGTTGGAGAGTGTAGGCCGTaGTTCTTGGCTAGAGTTCCTGTTGGAAGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: LWPLDCVGECRP*FLARVPVGSCL
Trigger: GAGACAGCTTCCAACAGGAACTCTAGCCAAGAACCACGGCCTACACTCTCCAACACAATCCAGAGGCCACAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS CAA 72 bp TTAGCTGTGGGACCTAGTTGTGGCCTCTGGATTGTGTaGGAGAGTGTAGGCCGTGGTTCTTGGCTAGAGTTC +
Preference number: 6 (lower is better)
Translates to: LAVGPSCGLWIV*ESVGRGSWLEF
Trigger: GAACTCTAGCCAAGAACCACGGCCTACACTCTCCAACACAATCCAGAGGCCACAACTAGGTCCCACAGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000505755.5
ENST00000510273.1
ENST00000515192.5
CDS CAA 72 bp ACTTCTCAAGGGGCTTGCTGTGTTCTGGTCCTGTGGTaGTCACAGGCTGAACCACCTGGGAATGATTGTAGC +
Preference number: 6 (lower is better)
Translates to: TSQGACCVLVLW*SQAEPPGNDCS
Trigger: GCTACAATCATTCCCAGGTGGTTCAGCCTGTGACAACCACAGGACCAGAACACAGCAAGCCCCTTGAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS CAA 90 bp AGGGTTCTGGAAAGTAAAGGAGCTGGTTCTCATCCAGAGCCATTCTaGGTTCTTAGACCGGAACCGGAACATGACAGACAGCACTTGGCC +
Preference number: 6 (lower is better)
Translates to: RVLESKGAGSHPEPF*VLRPEPEHDRQHLA
Trigger: GGCCAAGTGCTGTCTGTCATGTTCCGGTTCCGGTCTAAGAACCAAGAATGGCTCTGGATGAGAACCAGCTCCTTTACTTTCCAGAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS CAA 90 bp AGGGGTAAATTAGCTGTGGGACCTAGTTGTGGCCTCTGGATTGTGTaGGAGAGTGTAGGCCGTGGTTCTTGGCTAGAGTTCCTGTTGGAA +
Preference number: 6 (lower is better)
Translates to: RGKLAVGPSCGLWIV*ESVGRGSWLEFLLE
Trigger: TTCCAACAGGAACTCTAGCCAAGAACCACGGCCTACACTCTCCAACACAATCCAGAGGCCACAACTAGGTCCCACAGCTAATTTACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471844.6
CDS CAA 90 bp AGGGGTAAATTAGCTGTGGGACCTAGTTGTGGCCTCTGGATTGTGTaGGAGAGTGTAGGCCGTGGTTCTTGGCTAGAGTTCCTAGGAAAC +
Preference number: 6 (lower is better)
Translates to: RGKLAVGPSCGLWIV*ESVGRGSWLEFLGN
Trigger: GTTTCCTAGGAACTCTAGCCAAGAACCACGGCCTACACTCTCCAACACAATCCAGAGGCCACAACTAGGTCCCACAGCTAATTTACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510273.1
CDS CAA 90 bp AGGGGTAAATTAGCTGTGGGACCTAGTTGTGGCCTCTGGATTGTGTaGGAGAGTGTAGGCCGTGGTTCTTGGCTAGAGTTCTTCACATTG +
Preference number: 6 (lower is better)
Translates to: RGKLAVGPSCGLWIV*ESVGRGSWLEFFTL
Trigger: CAATGTGAAGAACTCTAGCCAAGAACCACGGCCTACACTCTCCAACACAATCCAGAGGCCACAACTAGGTCCCACAGCTAATTTACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS GCA 72 bp CCACATCATCTGGGTGCACCTGATCATAGAGTGTGCTaGCAAACCATTCAGACTGTGGCTGGTTCAAAACAG +
Preference number: 6 (lower is better)
Translates to: PHHLGAPDHRVC*QTIQTVAGSKQ
Trigger: CTGTTTTGAACCAGCCACAGTCTGAATGGTTTGGCAGCACACTCTATGATCAGGTGCACCCAGATGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000468970.1
ENST00000471844.6
ENST00000505755.5
ENST00000515192.5
CDS GCA 72 bp ATACGCCCTGTCAGGGCATTTTCTGAAGTGGAAAGCTaGTCACGAAGTTTATCCACATCATCTGGGTGCACC +
Preference number: 6 (lower is better)
Translates to: IRPVRAFSEVES*SRSLSTSSGCT
Trigger: GGTGCACCCAGATGATGTGGATAAACTTCGTGAGCAGCTTTCCACTTCAGAAAATGCCCTGACAGGGCGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000468970.1
ENST00000471844.6
ENST00000505755.5
ENST00000515192.5
CDS CCA 72 bp CTGGGAATGATTGTAGCTGGCCAGTCCATCTCTTCCTaGTACCATGTCCAATTCTGTTTGCTGTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LGMIVAGQSISS*YHVQFCLLLLL
Trigger: CAGCAGCAACAGCAAACAGAATTGGACATGGTACCAGGAAGAGATGGACTGGCCAGCTACAATCATTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS TCA 72 bp ACTGCCACACCTCATTCGGCAAATAAACGATCTCCTTaGGCCCATACACATTCTCATGGAAGACTGCTGACC +
Preference number: 6 (lower is better)
Translates to: TATPHSANKRSP*AHTHSHGRLLT
Trigger: GGTCAGCAGTCTTCCATGAGAATGTGTATGGGCTCAAGGAGATCGTTTATTTGCCGAATGAGGTGTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000468970.1
ENST00000471844.6
ENST00000505755.5
ENST00000512296.5
ENST00000515192.5
CDS TCA 72 bp CTCTCTCAGAACTATAAGTCCCAGAGACCTGATCAGTaGGGAAAGACGGCTTATAGGAGCCATCAGTGGATG +
Preference number: 6 (lower is better)
Translates to: LSQNYKSQRPDQ*GKTAYRSHQWM
Trigger: CATCCACTGATGGCTCCTATAAGCCGTCTTTCCTCACTGATCAGGTCTCTGGGACTTATAGTTCTGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505979.5
CDS CCA 72 bp CACCTTGAATTCCAGGTCCAGAGTTTCCAGAGGCAATaGCTGGACCCAGTGATGGTACATCTGATGTCATTT +
Preference number: 6 (lower is better)
Translates to: HLEFQVQSFQRQ*LDPVMVHLMSF
Trigger: AAATGACATCAGATGTACCATCACTGGGTCCAGCCATTGCCTCTGGAAACTCTGGACCTGGAATTCAAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000497108.6
ENST00000504358.1
ENST00000505755.5
ENST00000505979.5
ENST00000515192.5
CDS CCA 72 bp GATCCAGGATACGCCCTGTCAGGGCATTTTCTGAAGTaGAAAGCTGCTCACGAAGTTTATCCACATCATCTG +
Preference number: 6 (lower is better)
Translates to: DPGYALSGHFLK*KAAHEVYPHHL
Trigger: CAGATGATGTGGATAAACTTCGTGAGCAGCTTTCCACTTCAGAAAATGCCCTGACAGGGCGTATCCTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000468970.1
ENST00000471844.6
ENST00000505755.5
ENST00000515192.5
CDS CAA 72 bp CCTCTGGATTGTGTTGGAGAGTGTAGGCCGTGGTTCTaGGCTAGAGTTCTTCACATTGGTGTTGGTACAGAT +
Preference number: 6 (lower is better)
Translates to: PLDCVGECRPWF*ARVLHIGVGTD
Trigger: ATCTGTACCAACACCAATGTGAAGAACTCTAGCCAAGAACCACGGCCTACACTCTCCAACACAATCCAGAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS GCA 72 bp TATCCACATCATCTGGGTGCACCTGATCATAGAGTGTaGTGCCAAACCATTCAGACTGTGGCTGGTTCAAAA +
Preference number: 6 (lower is better)
Translates to: YPHHLGAPDHRV*CQTIQTVAGSK
Trigger: TTTTGAACCAGCCACAGTCTGAATGGTTTGGCAGCACACTCTATGATCAGGTGCACCCAGATGATGTGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000468970.1
ENST00000471844.6
ENST00000505755.5
ENST00000515192.5
CDS CCA 72 bp TTCTTAGACCGGAACCGGAACATGACAGACAGCACTTaGCCTTTTAATTTCACTACCTGTTGGAAGCTGTCT +
Preference number: 6 (lower is better)
Translates to: FLDRNRNMTDST*PFNFTTCWKLS
Trigger: AGACAGCTTCCAACAGGTAGTGAAATTAAAAGGCCAAGTGCTGTCTGTCATGTTCCGGTTCCGGTCTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000505755.5
ENST00000515192.5
CDS TCA 72 bp CCCTCAATGTTGTGTCGGGAGATGAACTCTGTTGGTTaGCAAACATTACTCATGTCTGTACAGTTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: PSMLCREMNSVG*QTLLMSVQLGE
Trigger: TTCTCCCAACTGTACAGACATGAGTAATGTTTGTCAACCAACAGAGTTCATCTCCCGACACAACATTGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000478972.2
ENST00000505755.5
ENST00000515192.5
CDS CCA 72 bp GATACCCTCAATGTTGTGTCGGGAGATGAACTCTGTTaGTTGACAAACATTACTCATGTCTGTACAGTTGGG +
Preference number: 6 (lower is better)
Translates to: DTLNVVSGDELC*LTNITHVCTVG
Trigger: CCCAACTGTACAGACATGAGTAATGTTTGTCAACCAACAGAGTTCATCTCCCGACACAACATTGAGGGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000478972.2
ENST00000505755.5
ENST00000515192.5
CDS CCA 72 bp CAGAAACCATGTTCTATGACACAGGGGTCATCTTGTTaGGTTCTAACTCCTTCTAGGTATTCAAAACCTGGT +
Preference number: 6 (lower is better)
Translates to: QKPCSMTQGSSC*VLTPSRYSKPG
Trigger: ACCAGGTTTTGAATACCTAGAAGGAGTTAGAACCCAACAAGATGACCCCTGTGTCATAGAACATGGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510273.1
CDS CAA 90 bp AGTGAAGATACCCTCAATGTTGTGTCGGGAGATGAACTCTGTTGGTaGACAAACATTACTCATGTCTGTACAGTTGGGAGAACTAGTTAC +
Preference number: 6 (lower is better)
Translates to: SEDTLNVVSGDELCW*TNITHVCTVGRTSY
Trigger: GTAACTAGTTCTCCCAACTGTACAGACATGAGTAATGTTTGTCAACCAACAGAGTTCATCTCCCGACACAACATTGAGGGTATCTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354396.6
ENST00000358595.10
ENST00000471844.6
ENST00000478972.2
ENST00000505755.5
ENST00000515192.5
CDS TCA 72 bp TTTTCCCTGGCAAACCGCTCCTTATCGTTAGACATCTaGTCATCATCACACCTCAAAAATTTACTGTTCCCT +
Preference number: 6 (lower is better)
Translates to: FSLANRSLSLDI*SSSHLKNLLFP
Trigger: AGGGAACAGTAAATTTTTGAGGTGTGATGATGATCAGATGTCTAACGATAAGGAGCGGTTTGCCAGGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497108.6
ENST00000505755.5