Pregenerated sensors for ARMT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000146476Ensembl transcript IDs: ENST00000367294.4, ENST00000494826.1, ENST00000545879.5
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCTaGGCGCGTACAGAGCCGCCAGGCGACTCAATTCACGTGCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: NHPVHVDGHQEAKLP*ARTEPPGDSIHVLL Trigger: AAGGAGCACGTGAATTGAGTCGCCTGGCGGCTCTGTACGCGCTCAGGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| 3UTR TCA 90 bp | ATGAAAGGTTTTAGGTCTTCCAATGAATTTAGTACATTGGTATTCTaGGAACTACTTTCTCCACCTGAGAGAGACAGATCACACTTATTT | + |
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Preference number: 1 (lower is better) Translates to: MKGFRSSNEFSTLVF*ELLSPPERDRSHLF Trigger: AAATAAGTGTGATCTGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACTAAATTCATTGGAAGACCTAAAACCTTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| 3UTR-3UTR TCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCCTCCTTTTCTGGGGATaGAAAGGTGCTCACCAGATC | + |
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Preference number: 2 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPLLFWG*KGAHQI Trigger: GATCTGGTGAGCACCTTTTCATCCCCAGAAAAGGAG...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| 3UTR-3UTR TCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGGAAGCTAAGCTTCCCTaGGCGCGTACAGAGCCGCCA | + |
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Preference number: 2 (lower is better) Translates to: STGQSKYKGVQMKQAIEMEAKLP*ARTEPP Trigger: TGGCGGCTCTGTACGCGCTCAGGGAAGCTTAGCTTC...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCCTGGGGATGAAAAGGTaGTCACCAGATCTTTCTATG | + |
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Preference number: 2 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPLGMKR*SPDLSM Trigger: CATAGAAAGATCTGGTGAGCACCTTTTCATCCCCAG...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| 3UTR-3UTR TCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGCTCCTTTTCTGGGGATaGAAAGGTGCTCACCAGATC | + |
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Preference number: 2 (lower is better) Translates to: STGQSKYKGVQMKQAIEMLLFWG*KGAHQI Trigger: GATCTGGTGAGCACCTTTTCATCCCCAGAAAAGGAG...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| 3UTR-3UTR GCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCGCGACTCAATTCACGTaGTCCTTTTCTGGGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRATQFT*SFSGDE Trigger: TTCATCCCCAGAAAAGGAGCACGTGAATTGAGTCGC...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| 3UTR-3UTR GCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCCTGGGGATGAAAAGGTaGTCACCAGATCTTTCTATG | + |
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Preference number: 2 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRLGMKR*SPDLSM Trigger: CATAGAAAGATCTGGTGAGCACCTTTTCATCCCCAG...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| 3UTR-3UTR TCA 90 bp | AATTTAGTACATTGGTATTCTGAGAACTACTTTCTCCACCTGAGAGAGACAGATATCAATTGTTGCAGGTaGGTACATAAAGCAATGATG | + |
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Preference number: 2 (lower is better) Translates to: NLVHWYSENYFLHLRETDINCCR*VHKAMM Trigger: CATCATTGCTTTATGTACTCACCTGCAACAATTGAT...ATCTGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACTAAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| 3UTR-3UTR TCA 90 bp | ATGAATTTAGTACATTGGTATTCTGAGAACTACTTTCTCCACCTGAGAGAGACAAACTCATCTTTCAGCTaGTTTTCATCTAGGTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: MNLVHWYSENYFLHLRETNSSFS*FSSRSS Trigger: TGAAGACCTAGATGAAAATCAGCTGAAAGATGAGTT...TGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACTAAATTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| 3UTR-3UTR CCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGAAATCCCATGCTTCCTaGAATATTAAATACCATGCA | + |
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Preference number: 2 (lower is better) Translates to: STGQSKYKGVQMKQAIEMKSHAS*NIKYHA Trigger: TGCATGGTATTTAATATTCCAGGAAGCATGGGATTT...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| 3UTR TCA 72 bp | TCTAGGTCTTCAATAGTTCTTATCAATTGTTGCAGGTaGGTACATAAAGCAATGATGGATTCCTGTGACCCA | + |
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Preference number: 3 (lower is better) Translates to: SRSSIVLINCCR*VHKAMMDSCDP Trigger: TGGGTCACAGGAATCCATCATTGCTTTATGTACTCACCTGCAACAATTGATAAGAACTATTGAAGACCTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| 3UTR-3UTR CAA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCGTAAATATCTTTAACTaGCTTAACCCAGCTATCCCC | + |
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Preference number: 3 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRVNIFN*LNPAIP Trigger: GGGGATAGCTGGGTTAAGCAAGTTAAAGATATTTAC...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| 3UTR TCA 72 bp | TTTAGGTCTTCCAATGAATTTAGTACATTGGTATTCTaGGAACTACTTTCTCCACCTGAGAGAGACAGATCA | + |
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Preference number: 3 (lower is better) Translates to: FRSSNEFSTLVF*ELLSPPERDRS Trigger: TGATCTGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACTAAATTCATTGGAAGACCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| CDS-3UTR TCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCTCCCACGTCCTGTCCTaGGAGAGACGCCGGGACGAC | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPSHVLS*ERRRDD Trigger: GTCGTCCCGGCGTCTCTCTCAGGACAGGACGTGGGA...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367294.4 |
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| CDS-3UTR TCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCGAAGCTAAGCTTCCCTaGGCGCGTACAGAGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPEAKLP*ARTEPP Trigger: TGGCGGCTCTGTACGCGCTCAGGGAAGCTTAGCTTC...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | ATGAATTTAGTACATTGGTATTCTGAGAACTACTTTCTCCACCTGAGAGAGACACCCCACGTCCTGTCCTaGGAGAGACGCCGGGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: MNLVHWYSENYFLHLRETPHVLS*ERRRDD Trigger: GTCGTCCCGGCGTCTCTCTCAGGACAGGACGTGGGG...TGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACTAAATTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| CDS-3UTR TCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCCCCCACGTCCTGTCCTaGGAGAGACGCCGGGACGAC | + |
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Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRPHVLS*ERRRDD Trigger: GTCGTCCCGGCGTCTCTCTCAGGACAGGACGTGGGG...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000545879.5 |
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| CDS-3UTR GCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCTGCAACCTGAGGCATTaGACAGTACTCATGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPCNLRH*TVLMRQ Trigger: CTGCCTCATGAGTACTGTGCAATGCCTCAGGTTGCA...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCTTCCATATTTTCCAGTaGTCCACCAGCTGGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPFHIFQ*STSWAQ Trigger: CTGAGCCCAGCTGGTGGACCACTGGAAAATATGGAA...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR GCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCTATGGTACAGAGTGGTaGAGGATGGAAGCCATTCAG | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPYGTEW*RMEAIQ Trigger: CTGAATGGCTTCCATCCTGCACCACTCTGTACCATA...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR GCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCAGGAGCTGTTCCCCTTaGCCAGGCTGCAGACCAACC | + |
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Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRRSCSP*PGCRPT Trigger: GGTTGGTCTGCAGCCTGGGCAAGGGGAACAGCTCCT...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGCAGTGGTCCACCAGCTaGGCTCAGAGGCCAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMQWSTS*AQRPGA Trigger: AGCTCCTGGCCTCTGAGCCCAGCTGGTGGACCACTG...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR GCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGAGGAGCTGTTCCCCTTaGCCAGGCTGCAGACCAACC | + |
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Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMRSCSP*PGCRPT Trigger: GGTTGGTCTGCAGCCTGGGCAAGGGGAACAGCTCCT...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCAGTCAGCCCCACACTTaGACATCCACTTATGATTAC | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPSQPHT*TSTYDY Trigger: GTAATCATAAGTGGATGTCCAAGTGTGGGGCTGACT...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCGAGTACATAAAGCAATaGTGGATTCCTGTGACCCAT | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPEYIKQ*WIPVTH Trigger: ATGGGTCACAGGAATCCATCATTGCTTTATGTACTC...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCCTAGAGGAGCGGATATaGAAGCGAGCGAAAGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRLEERI*KRAKAG Trigger: TCCGGCTTTCGCTCGCTTCCATATCCGCTCCTCTAG...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCAGTACATTGGTATTCTaGGAACTACTTTCTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPSTLVF*ELLSPP Trigger: AGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACT...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCGCAATTGCTAAGCAATaGCCAAAGATGTTCCATATC | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPAIAKQ*PKMFHI Trigger: GATATGGAACATCTTTGGTCATTGCTTAGCAATTGC...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCAGGGGACCATCGTACTaGAATATTCCATATTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPRGPSY*NIPYFP Trigger: TGGAAAATATGGAATATTTCAGTACGATGGTCCCCT...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCATCTTTCTATGCAACTaGGAGCTCCTAAATCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPIFLCN*ELLNQV Trigger: GACTTGATTTAGGAGCTCTCAGTTGCATAGAAAGAT...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCTTGGACATCCACTTATaGTTACTGTGTTTTACCTGT | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPLDIHL*LLCFTC Trigger: ACAGGTAAAACACAGTAATCATAAGTGGATGTCCAA...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCCTCCTTTTCTGGGGATaGAAAGGTGCTCACCAGATC | + |
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Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRLLFWG*KGAHQI Trigger: GATCTGGTGAGCACCTTTTCATCCCCAGAAAAGGAG...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCATCAAAGTAATCGATTaGTGGACTCTGGATAATTGC | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPIKVID*WTLDNC Trigger: GCAATTATCCAGAGTCCACCAATCGATTACTTTGAT...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCTTCCATATTTTCCAGTaGTCCACCAGCTGGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRFHIFQ*STSWAQ Trigger: CTGAGCCCAGCTGGTGGACCACTGGAAAATATGGAA...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCTCAAACGGCAAACAGTaGCTCGCCAGAAGACCCAAT | + |
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Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRSNGKQ*LARRPN Trigger: ATTGGGTCTTCTGGCGAGCCACTGTTTGCCGTTTGA...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | ATTCTACCAACAACCACGGTGAGTAGAACCATCTTGATTTTCCATCACTTTCATACTACTTTCTCCACCTaGGAGAGACAGATCACACTT | + |
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Preference number: 4 (lower is better) Translates to: ILPTTTVSRTILIFHHFHTTFST*ERQITL Trigger: AAGTGTGATCTGTCTCTCTCAGGTGGAGAAAGTAGT...ATGAAAGTGATGGAAAATCAAGATGGTTCTACTCACCGTGGTTGTTGGTAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| CDS-3UTR TCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGAAGTCAGGTGCAACCTaGGGCATTGCACAGTACTCA | + |
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Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMKSGAT*GIAQYS Trigger: TGAGTACTGTGCAATGCCTCAGGTTGCACCTGACTT...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CCA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCAAATCCCATGCTTCCTaGAATATTAAATACCATGCA | + |
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Preference number: 4 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPKSHAS*NIKYHA Trigger: TGCATGGTATTTAATATTCCAGGAAGCATGGGATTT...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR GCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGTATGGTACAGAGTGGTaGAGGATGGAAGCCATTCAG | + |
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Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMYGTEW*RMEAIQ Trigger: CTGAATGGCTTCCATCCTGCACCACTCTGTACCATA...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR GCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGGCGACTCAATTCACGTaGTCCTTTTCTGGGGATGAA | + |
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Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMATQFT*SFSGDE Trigger: TTCATCCCCAGAAAAGGAGCACGTGAATTGAGTCGC...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGACTACTTTCTCCACCTaGGAGAGACAGATCACACTT | + |
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Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMTTFST*ERQITL Trigger: AAGTGTGATCTGTCTCTCTCAGGTGGAGAAAGTAGT...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCGGCTGCAGACCAACCTaGATTTCAGCTTTTAATGTT | + |
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Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRGCRPT*ISAFNV Trigger: AACATTAAAAGCTGAAATTCAGGTTGGTCTGCAGCC...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR GCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGCTGGGGATGAAAAGGTaGTCACCAGATCTTTCTATG | + |
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Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMLGMKR*SPDLSM Trigger: CATAGAAAGATCTGGTGAGCACCTTTTCATCCCCAG...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGTCTTATGGTACAGAGTaGTGCAGGATGGAAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMSYGTE*CRMEAI Trigger: AATGGCTTCCATCCTGCACCACTCTGTACCATAAGA...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | CTTCCAATGAATTTAGTACATTGGTATTCTGAGAACTACTTTCTCCACCTGAGAAATGATGGATTCCTGTaGCCCATAGAAATTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPMNLVHWYSENYFLHLRNDGFL*PIEILL Trigger: GAGCAAAATTTCTATGGGTCACAGGAATCCATCATT...TCTCAGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACTAAATTCATTGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| CDS-3UTR TCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCAATGATGGATTCCTGTaGCCCATAGAAATTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRNDGFL*PIEILL Trigger: GAGCAAAATTTCTATGGGTCACAGGAATCCATCATT...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | ATTCTACCAACAACCACGGTGAGTAGAACCATCTTGATTTTCCATCACTTTCATAACTCATCTTTCAGCTaGTTTTCATCTAGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILPTTTVSRTILIFHHFHNSSFS*FSSRSS Trigger: TGAAGACCTAGATGAAAATCAGCTGAAAGATGAGTT...ATGAAAGTGATGGAAAATCAAGATGGTTCTACTCACCGTGGTTGTTGGTAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| CDS-3UTR TCA 90 bp | CTTCCAATGAATTTAGTACATTGGTATTCTGAGAACTACTTTCTCCACCTGAGAAGTACATTGGTATTCTaGGAACTACTTTCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LPMNLVHWYSENYFLHLRSTLVF*ELLSPP Trigger: AGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACT...TCTCAGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACTAAATTCATTGGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| CDS-3UTR TCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCAGTACATTGGTATTCTaGGAACTACTTTCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRSTLVF*ELLSPP Trigger: AGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACT...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | ATGAATTTAGTACATTGGTATTCTGAGAACTACTTTCTCCACCTGAGAGAGACAGCAATTGCTAAGCAATaGCCAAAGATGTTCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: MNLVHWYSENYFLHLRETAIAKQ*PKMFHI Trigger: GATATGGAACATCTTTGGTCATTGCTTAGCAATTGC...TGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACTAAATTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| CDS-3UTR TCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCAGGGGACCATCGTACTaGAATATTCCATATTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRRGPSY*NIPYFP Trigger: TGGAAAATATGGAATATTTCAGTACGATGGTCCCCT...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCATCTTTCTATGCAACTaGGAGCTCCTAAATCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRIFLCN*ELLNQV Trigger: GACTTGATTTAGGAGCTCTCAGTTGCATAGAAAGAT...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR GCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCAGAAACTTTATTTGGTaGCCGATCAAACGGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRRNFIW*PIKRQT Trigger: TGTTTGCCGTTTGATCGGGCACCAAATAAAGTTTCT...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGAATGATGGATTCCTGTaGCCCATAGAAATTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMNDGFL*PIEILL Trigger: GAGCAAAATTTCTATGGGTCACAGGAATCCATCATT...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | CTTCCAATGAATTTAGTACATTGGTATTCTGAGAACTACTTTCTCCACCTGAGAATCAATTGTTGCAGGTaGGTACATAAAGCAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: LPMNLVHWYSENYFLHLRINCCR*VHKAMM Trigger: CATCATTGCTTTATGTACTCACCTGCAACAATTGAT...TCTCAGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACTAAATTCATTGGAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| CDS-3UTR TCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCATCAATTGTTGCAGGTaGGTACATAAAGCAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRINCCR*VHKAMM Trigger: CATCATTGCTTTATGTACTCACCTGCAACAATTGAT...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCAACTCATCTTTCAGCTaGTTTTCATCTAGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRNSSFS*FSSRSS Trigger: TGAAGACCTAGATGAAAATCAGCTGAAAGATGAGTT...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGGCAATTGCTAAGCAATaGCCAAAGATGTTCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMAIAKQ*PKMFHI Trigger: GATATGGAACATCTTTGGTCATTGCTTAGCAATTGC...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCTTGGACATCCACTTATaGTTACTGTGTTTTACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRLDIHL*LLCFTC Trigger: ACAGGTAAAACACAGTAATCATAAGTGGATGTCCAA...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGATTGCACAGTACTCATaGGGCAGAGTCCAAAATATA | + |
|
Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMIAQYS*GRVQNI Trigger: TATATTTTGGACTCTGCCTCATGAGTACTGTGCAAT...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CCA 90 bp | ATGAATTTAGTACATTGGTATTCTGAGAACTACTTTCTCCACCTGAGAGAGACAATCAAAGTAATCGATTaGTGGACTCTGGATAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: MNLVHWYSENYFLHLRETIKVID*WTLDNC Trigger: GCAATTATCCAGAGTCCACCAATCGATTACTTTGAT...TGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACTAAATTCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| CDS-3UTR TCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGATCAATTGTTGCAGGTaGGTACATAAAGCAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMINCCR*VHKAMM Trigger: CATCATTGCTTTATGTACTCACCTGCAACAATTGAT...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR TCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGAACTCATCTTTCAGCTaGTTTTCATCTAGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMNSSFS*FSSRSS Trigger: TGAAGACCTAGATGAAAATCAGCTGAAAGATGAGTT...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CCA 90 bp | ATGAATTTAGTACATTGGTATTCTGAGAACTACTTTCTCCACCTGAGAGAGACAAACCAAGGGGATAAATaGTTTATCTGTTTGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: MNLVHWYSENYFLHLRETNQGDK*FICLQF Trigger: GAATTGCAAACAGATAAACCATTTATCCCCTTGGTT...TGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACTAAATTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| CDS-3UTR CCA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGAACCAAGGGGATAAATaGTTTATCTGTTTGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: STGQSKYKGVQMKQAIEMNQGDK*FICLQF Trigger: GAATTGCAAACAGATAAACCATTTATCCCCTTGGTT...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS CCA 90 bp | GGGGACGAAGGCGGGGCCAGCGGAGGGCGACTAGAGGAGCGGATATaGAAGCGAGCGAAAGCCGGAAGCAGGCAAGGGACCGGGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GDEGGASGGRLEERI*KRAKAGSRQGTGRS Trigger: GGACCTCCCGGTCCCTTGCCTGCTTCCGGCTTTCGCTCGCTTCCATATCCGCTCCTCTAGTCGCCCTCCGCTGGCCCCGCCTTCGTCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000545879.5 |
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| CDS CCA 90 bp | TTGAATAAAGAAACTTTATTTGGTGCCCGATCAAACGGCAAACAGTaGCTCGCCAGAAGACCCAATCTTCCGGGGACGAAGGCGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LNKETLFGARSNGKQ*LARRPNLPGTKAGP Trigger: TGGCCCCGCCTTCGTCCCCGGAAGATTGGGTCTTCTGGCGAGCCACTGTTTGCCGTTTGATCGGGCACCAAATAAAGTTTCTTTATTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000545879.5 |
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| CDS-3UTR CAA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCCAGGAGCTGTTCCCCTaGCCCAGGCTGCAGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRQELFP*PRLQTN Trigger: GTTGGTCTGCAGCCTGGGCAAGGGGAACAGCTCCTG...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS TCA 90 bp | ATGCAACTGAGAGCTCCTAAATCAAGTCAAAGGGGACCATCGTACTaGAATATTCCATATTTTCCAGTGGTCCACCAGCTGGGCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: MQLRAPKSSQRGPSY*NIPYFPVVHQLGSE Trigger: CTCTGAGCCCAGCTGGTGGACCACTGGAAAATATGGAATATTTCAGTACGATGGTCCCCTTTGACTTGATTTAGGAGCTCTCAGTTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CAA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCGTGCAACCTGAGGCATaGCACAGTACTCATGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRVQPEA*HSTHEA Trigger: TGCCTCATGAGTACTGTGCAATGCCTCAGGTTGCAC...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CAA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCGTAAATATCTTTAACTaGCTTAACCCAGCTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPVNIFN*LNPAIP Trigger: GGGGATAGCTGGGTTAAGCAAGTTAAAGATATTTAC...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CAA 90 bp | CAAAAGAAAAATCATCCAGTGCACGTAGATGGGCACCAAGAAGCTAAGCTTCCCCTTGTTTTCTTGCAATaGCTAAGCAATGACCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QKKNHPVHVDGHQEAKLPLVFLQ*LSNDQR Trigger: TCTTTGGTCATTGCTTAGCAATTGCAAGAAAACAAG...GGGAAGCTTAGCTTCTTGGTGCCCATCTACGTGCACTGGATGATTTTTCTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CAA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGGTGCAACCTGAGGCATaGCACAGTACTCATGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: STGQSKYKGVQMKQAIEMVQPEA*HSTHEA Trigger: TGCCTCATGAGTACTGTGCAATGCCTCAGGTTGCAC...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS TCA 90 bp | CCCATTTTCTGTCACCTGTCAACTTCCTGTAATTCAAATCACCCTTaGATAAAATTAAATGTGCCTTCTGTAGTTCAGCATATAAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PIFCHLSTSCNSNHP*IKLNVPSVVQHISQ Trigger: CTGACTTATATGCTGAACTACAGAAGGCACATTTAATTTTATTCAAGGGTGATTTGAATTACAGGAAGTTGACAGGTGACAGAAAATGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CAA 90 bp | AAACATCACAGTTGTAAGAAATGCCTCTCTTTACAAAGAGTCATTAAGATGCGCCTTGTTTTCTTGCAATaGCTAAGCAATGACCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KHHSCKKCLSLQRVIKMRLVFLQ*LSNDQR Trigger: TCTTTGGTCATTGCTTAGCAATTGCAAGAAAACAAG...GCGCATCTTAATGACTCTTTGTAAAGAGAGGCATTTCTTACAACTGTGATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS-3UTR CAA 90 bp | AATTTAGTACATTGGTATTCTGAGAACTACTTTCTCCACCTGAGAGAGACAGATCTTGTTTTCTTGCAATaGCTAAGCAATGACCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NLVHWYSENYFLHLRETDLVFLQ*LSNDQR Trigger: TCTTTGGTCATTGCTTAGCAATTGCAAGAAAACAAG...ATCTGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAATACCAATGTACTAAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494826.1 |
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| CDS-3UTR CAA 90 bp | TCTACAGGTCAATCAAAATACAAAGGCGTGCAAATGAAACAAGCTATTGAAATGATAAAGAAACTTTATTaGGTGCCCGATCAAACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: STGQSKYKGVQMKQAIEMIKKLY*VPDQTA Trigger: TGCCGTTTGATCGGGCACCAAATAAAGTTTCTTTAT...CATTTCAATAGCTTGTTTCATTTGCACGCCTTTGTATTTTGATTGACCTGTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545879.5 |
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| CDS CCA 72 bp | GGCGGGGCCAGCGGAGGGCGACTAGAGGAGCGGATATaGAAGCGAGCGAAAGCCGGAAGCAGGCAAGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: GGASGGRLEERI*KRAKAGSRQGT Trigger: GGTCCCTTGCCTGCTTCCGGCTTTCGCTCGCTTCCATATCCGCTCCTCTAGTCGCCCTCCGCTGGCCCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545879.5 |
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| CDS TCA 72 bp | TCTTTTCAGCTTCCACGCCTTCCCCACGTCCTGTCCTaGGAGAGACGCCGGGACGACAGCCATCACTTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SFQLPRLPHVLS*ERRRDDSHHFP Trigger: CGGAAAGTGATGGCTGTCGTCCCGGCGTCTCTCTCAGGACAGGACGTGGGGAAGGCGTGGAAGCTGAAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000494826.1 ENST00000545879.5 |
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| CDS CCA 72 bp | ACTGAAATATTCCATATTTTCCAGTGGTCCACCAGCTaGGCTCAGAGGCCAGGAGCTGTTCCCCTTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TEIFHIFQWSTS*AQRPGAVPLAQ Trigger: CTGGGCAAGGGGAACAGCTCCTGGCCTCTGAGCCCAGCTGGTGGACCACTGGAAAATATGGAATATTTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS CCA 72 bp | GAAACTTTATTTGGTGCCCGATCAAACGGCAAACAGTaGCTCGCCAGAAGACCCAATCTTCCGGGGACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ETLFGARSNGKQ*LARRPNLPGTK Trigger: CTTCGTCCCCGGAAGATTGGGTCTTCTGGCGAGCCACTGTTTGCCGTTTGATCGGGCACCAAATAAAGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545879.5 |
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| CDS CAA 90 bp | GTGCCTTCTGTAGTTCAGCATATAAGTCAGGTGCAACCTGAGGCATaGCACAGTACTCATGAGGCAGAGTCCAAAATATATGATTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VPSVVQHISQVQPEA*HSTHEAESKIYDCG Trigger: ACCACAATCATATATTTTGGACTCTGCCTCATGAGTACTGTGCAATGCCTCAGGTTGCACCTGACTTATATGCTGAACTACAGAAGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS TCA 72 bp | AGAGCTCCTAAATCAAGTCAAAGGGGACCATCGTACTaGAATATTCCATATTTTCCAGTGGTCCACCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RAPKSSQRGPSY*NIPYFPVVHQL Trigger: CAGCTGGTGGACCACTGGAAAATATGGAATATTTCAGTACGATGGTCCCCTTTGACTTGATTTAGGAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS CAA 72 bp | GTAGTTCAGCATATAAGTCAGGTGCAACCTGAGGCATaGCACAGTACTCATGAGGCAGAGTCCAAAATATAT | + |
|
Preference number: 6 (lower is better) Translates to: VVQHISQVQPEA*HSTHEAESKIY Trigger: ATATATTTTGGACTCTGCCTCATGAGTACTGTGCAATGCCTCAGGTTGCACCTGACTTATATGCTGAACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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| CDS TCA 72 bp | TCTTCCCAGTCAGCCCCACACTTGGACATCCACTTATaGTTACTGTGTTTTACCTGTTCAATTAACCAATTA | + |
|
Preference number: 6 (lower is better) Translates to: SSQSAPHLDIHL*LLCFTCSINQL Trigger: TAATTGGTTAATTGAACAGGTAAAACACAGTAATCATAAGTGGATGTCCAAGTGTGGGGCTGACTGGGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367294.4 ENST00000545879.5 |
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