Pregenerated sensors for ARMS2 (Homo sapiens)
Ensembl gene IDs: ENSG00000254636Ensembl transcript IDs: ENST00000528446.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGAAGATGCATCCAATTGGTGATGACGTGATGAGTCCGCCCAGGTaGGGAAATTCCAGGTTGCACAGTGTGGCCGCAGGTGGGAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: QKMHPIGDDVMSPPR*GNSRLHSVAAGGKR Trigger: TCTCTTCCCACCTGCGGCCACACTGTGCAACCTGGAATTTCCCCACCTGGGCGGACTCATCACGTCATCACCAATTGGATGCATCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| 3UTR CAA 90 bp | ATTGGTGATGACGTGATGAGTCCGCCCAGGTGGGGAAATTCCAGGTaGCACAGTGTGGCCGCAGGTGGGAAGAGAGTCCTGTGGACAGTT | + |
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Preference number: 2 (lower is better) Translates to: IGDDVMSPPRWGNSR*HSVAAGGKRVLWTV Trigger: AACTGTCCACAGGACTCTCTTCCCACCTGCGGCCACACTGTGCAACCTGGAATTTCCCCACCTGGGCGGACTCATCACGTCATCACCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| 3UTR-3UTR CCA 90 bp | TGCACAGAGCAGAAGATGCATCCAATTGGTGATGACGTGATGAGTCCGCCCAGGCCAGGTTGCACAGTGTaGCCGCAGGTGGGAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: CTEQKMHPIGDDVMSPPRPGCTV*PQVGRE Trigger: CTCTCTTCCCACCTGCGGCCACACTGTGCAACCTGG...CCTGGGCGGACTCATCACGTCATCACCAATTGGATGCATCTTCTGCTCTGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| 3UTR-3UTR TCA 90 bp | AATCCAGATGTTAGGAGAAGATTGGGCTGCATCTCAAGGGTTGAGAAAGATTTCAGTCCTGTGGACAGTTaGGGCAGCTGGAGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: NPDVRRRLGCISRVEKDFSPVDS*GSWREG Trigger: CCCTTCCCTCCAGCTGCCTCAACTGTCCACAGGACT...GAAATCTTTCTCAACCCTTGAGATGCAGCCCAATCTTCTCCTAACATCTGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| 3UTR CAA 90 bp | GGAGGGAATGCAGTGACAGAGAGGAATCCAGATGTTAGGAGAAGATaGGGCTGCATCTCAAGGGTTGAGAAAGATTTCACCAGCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: GGNAVTERNPDVRRR*GCISRVEKDFTSCT Trigger: TGTGCAGCTGGTGAAATCTTTCTCAACCCTTGAGATGCAGCCCAATCTTCTCCTAACATCTGGATTCCTCTCTGTCACTGCATTCCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGCAGAAGATGCATCCAATTGGTGATGACGTGATGAGTCCGCCCAGGTGGCCTCCTAAGGATTTTTaGCTTCACATTGATGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: TEQKMHPIGDDVMSPPRWPPKDF*LHIDAD Trigger: ATCAGCATCAATGTGAAGCCAAAAATCCTTAGGAGG...CCACCTGGGCGGACTCATCACGTCATCACCAATTGGATGCATCTTCTGCTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| 3UTR CCA 72 bp | TTGCACAGTGTGGCCGCAGGTGGGAAGAGAGTCCTGTaGACAGTTGAGGCAGCTGGAGGGAAGGGGACCAGT | + |
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Preference number: 3 (lower is better) Translates to: LHSVAAGGKRVL*TVEAAGGKGTS Trigger: ACTGGTCCCCTTCCCTCCAGCTGCCTCAACTGTCCACAGGACTCTCTTCCCACCTGCGGCCACACTGTGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| 3UTR CCA 72 bp | GTCCGCCCAGGTGGGGAAATTCCAGGTTGCACAGTGTaGCCGCAGGTGGGAAGAGAGTCCTGTGGACAGTTG | + |
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Preference number: 3 (lower is better) Translates to: VRPGGEIPGCTV*PQVGRESCGQL Trigger: CAACTGTCCACAGGACTCTCTTCCCACCTGCGGCCACACTGTGCAACCTGGAATTTCCCCACCTGGGCGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| 3UTR CCA 72 bp | CATCCAATTGGTGATGACGTGATGAGTCCGCCCAGGTaGGGAAATTCCAGGTTGCACAGTGTGGCCGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: HPIGDDVMSPPR*GNSRLHSVAAG Trigger: ACCTGCGGCCACACTGTGCAACCTGGAATTTCCCCACCTGGGCGGACTCATCACGTCATCACCAATTGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| 3UTR CCA 72 bp | GTTGTGAGGGACTCCCTCTGTCCTCCTAAGGATTTTTaGCTTCACATTGATGCTGATGAGAAGCTCCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: VVRDSLCPPKDF*LHIDADEKLQL Trigger: CAACTGGAGCTTCTCATCAGCATCAATGTGAAGCCAAAAATCCTTAGGAGGACAGAGGGAGTCCCTCACAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| 3UTR-3UTR CAA 90 bp | AATCCAGATGTTAGGAGAAGATTGGGCTGCATCTCAAGGGTTGAGAAAGATTTCATTTTTGGCTTCACATaGATGCTGATGAGAAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: NPDVRRRLGCISRVEKDFIFGFT*MLMRSS Trigger: GGAGCTTCTCATCAGCATCAATGTGAAGCCAAAAAT...GAAATCTTTCTCAACCCTTGAGATGCAGCCCAATCTTCTCCTAACATCTGGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CCA 90 bp | GTTGAGGCAGCTGGAGGGAAGGGGACCAGTCTAGGTTGTGAGGGACTCCCTCTGGGGAAGAGAGTCCTGTaGACAGTTGAGGCAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VEAAGGKGTSLGCEGLPLGKRVL*TVEAAG Trigger: TCCAGCTGCCTCAACTGTCCACAGGACTCTCTTCCC...CAGAGGGAGTCCCTCACAACCTAGACTGGTCCCCTTCCCTCCAGCTGCCTCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR TCA 90 bp | ACAGAGCAGAAGATGCATCCAATTGGTGATGACGTGATGAGTCCGCCCAGGTGGAGTCCTGTGGACAGTTaGGGCAGCTGGAGGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: TEQKMHPIGDDVMSPPRWSPVDS*GSWREG Trigger: CCCTTCCCTCCAGCTGCCTCAACTGTCCACAGGACT...CCACCTGGGCGGACTCATCACGTCATCACCAATTGGATGCATCTTCTGCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR GCA 90 bp | AGTCCGCCCAGGTGGGGAAATTCCAGGTTGCACAGTGTGGCCGCAGGTGGGAAGTTGGCAGAATCACCTTaGTGCAGTGTGGATGATAGA | + |
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Preference number: 4 (lower is better) Translates to: SPPRWGNSRLHSVAAGGKLAESP*CSVDDR Trigger: TCTATCATCCACACTGCAGCAAGGTGATTCTGCCAA...CTTCCCACCTGCGGCCACACTGTGCAACCTGGAATTTCCCCACCTGGGCGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR GCA 90 bp | TCCCTCTGTCCTCCTAAGGATTTTTGGCTTCACATTGATGCTGATGAGAAGCTCAAGGTGCTGTCCCCTTaGCAAGCCAGCTGCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: SLCPPKDFWLHIDADEKLKVLSP*QASCHL Trigger: GAGATGGCAGCTGGCTTGGCAAGGGGACAGCACCTT...GAGCTTCTCATCAGCATCAATGTGAAGCCAAAAATCCTTAGGAGGACAGAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR GCA 90 bp | TGCACAGAGCAGAAGATGCATCCAATTGGTGATGACGTGATGAGTCCGCCCAGGGCAGAATCACCTTGCTaGAGTGTGGATGATAGACAG | + |
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Preference number: 4 (lower is better) Translates to: CTEQKMHPIGDDVMSPPRAESPC*SVDDRQ Trigger: CTGTCTATCATCCACACTGCAGCAAGGTGATTCTGC...CCTGGGCGGACTCATCACGTCATCACCAATTGGATGCATCTTCTGCTCTGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CCA 90 bp | GTGAGGGACTCCCTCTGTCCTCCTAAGGATTTTTGGCTTCACATTGATGCTGATTGCTGGAACCTCCTCTaGGTTCCAGCAGGAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VRDSLCPPKDFWLHIDADCWNLL*VPAGEK Trigger: CTTCTCTCCTGCTGGAACCCAGAGGAGGTTCCAGCA...ATCAGCATCAATGTGAAGCCAAAAATCCTTAGGAGGACAGAGGGAGTCCCTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR TCA 90 bp | TCCCTCTGTCCTCCTAAGGATTTTTGGCTTCACATTGATGCTGATGAGAAGCTCCTCGCAGAGTGGAAATaGAGGACACAGGAACCACCG | + |
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Preference number: 4 (lower is better) Translates to: SLCPPKDFWLHIDADEKLLAEWK*RTQEPP Trigger: CGGTGGTTCCTGTGTCCTTCATTTCCACTCTGCGAG...GAGCTTCTCATCAGCATCAATGTGAAGCCAAAAATCCTTAGGAGGACAGAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CCA 90 bp | ACAGAGCAGAAGATGCATCCAATTGGTGATGACGTGATGAGTCCGCCCAGGTGGATGTTAGGAGAAGATTaGGCTGCATCTCAAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: TEQKMHPIGDDVMSPPRWMLGED*AASQGL Trigger: CAACCCTTGAGATGCAGCCCAATCTTCTCCTAACAT...CCACCTGGGCGGACTCATCACGTCATCACCAATTGGATGCATCTTCTGCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR TCA 90 bp | TTTTGGCTTCACATTGATGCTGATGAGAAGCTCCAGTTGGCTTTTAAGGAGATAAGTGTCAGGTGGTGCTaGGGCTGCTGGAACCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: FWLHIDADEKLQLAFKEISVRWC*GCWNLL Trigger: GAGGAGGTTCCAGCAGCCTCAGCACCACCTGACACT...TATCTCCTTAAAAGCCAACTGGAGCTTCTCATCAGCATCAATGTGAAGCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR TCA 90 bp | GAAGATTGGGCTGCATCTCAAGGGTTGAGAAAGATTTCACCAGCTGCACAGAGCCTGCATCTCAAGGGTTaGGAAAGATTTCACCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: EDWAASQGLRKISPAAQSLHLKG*ERFHQL Trigger: CAGCTGGTGAAATCTTTCTCAACCCTTGAGATGCAG...GCTCTGTGCAGCTGGTGAAATCTTTCTCAACCCTTGAGATGCAGCCCAATCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR GCA 90 bp | GAAGATTGGGCTGCATCTCAAGGGTTGAGAAAGATTTCACCAGCTGCACAGAGCGTGATAAAGACAGTTTaGTCCTCTGCTTGTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: EDWAASQGLRKISPAAQSVIKTV*SSACHW Trigger: CCAGTGACAAGCAGAGGAGCAAACTGTCTTTATCAC...GCTCTGTGCAGCTGGTGAAATCTTTCTCAACCCTTGAGATGCAGCCCAATCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR GCA 90 bp | TCCCTCTGTCCTCCTAAGGATTTTTGGCTTCACATTGATGCTGATGAGAAGCTCGCACAGAGCAGAAGATaGATCCAATTGGTGATGACG | + |
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Preference number: 4 (lower is better) Translates to: SLCPPKDFWLHIDADEKLAQSRR*IQLVMT Trigger: CGTCATCACCAATTGGATGCATCTTCTGCTCTGTGC...GAGCTTCTCATCAGCATCAATGTGAAGCCAAAAATCCTTAGGAGGACAGAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CCA 90 bp | ATTGATGCTGATGAGAAGCTCCAGTTGGCTTTTAAGGAGATATGTTTTGGCAGAATGAGTCCGCCCAGGTaGGGAAATTCCAGGTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: IDADEKLQLAFKEICFGRMSPPR*GNSRLH Trigger: GTGCAACCTGGAATTTCCCCACCTGGGCGGACTCAT...TCTGCCAAAACATATCTCCTTAAAAGCCAACTGGAGCTTCTCATCAGCATCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| 3UTR CAA 72 bp | ACTCCCTCTGTCCTCCTAAGGATTTTTGGCTTCACATaGATGCTGATGAGAAGCTCCAGTTGGCTTTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: TPSVLLRIFGFT*MLMRSSSWLLR Trigger: CCTTAAAAGCCAACTGGAGCTTCTCATCAGCATCAATGTGAAGCCAAAAATCCTTAGGAGGACAGAGGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR GCA 90 bp | AATCCAGATGTTAGGAGAAGATTGGGCTGCATCTCAAGGGTTGAGAAAGATTTCAGGAGAAGATTGGGCTaGATCTCAAGGGTTGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: NPDVRRRLGCISRVEKDFRRRLG*ISRVEK Trigger: TTTCTCAACCCTTGAGATGCAGCCCAATCTTCTCCT...GAAATCTTTCTCAACCCTTGAGATGCAGCCCAATCTTCTCCTAACATCTGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CCA 90 bp | ATTGATGCTGATGAGAAGCTCCAGTTGGCTTTTAAGGAGATATGTTTTGGCAGAAAGCAGAGCTCAGTGTaGATTTTAGCAGCTGGGATC | + |
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Preference number: 4 (lower is better) Translates to: IDADEKLQLAFKEICFGRKQSSV*ILAAGI Trigger: GATCCCAGCTGCTAAAATCCACACTGAGCTCTGCTT...TCTGCCAAAACATATCTCCTTAAAAGCCAACTGGAGCTTCTCATCAGCATCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CCA 90 bp | TCCCTCTGTCCTCCTAAGGATTTTTGGCTTCACATTGATGCTGATGAGAAGCTCCCTCCTAAGGATTTTTaGCTTCACATTGATGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: SLCPPKDFWLHIDADEKLPPKDF*LHIDAD Trigger: ATCAGCATCAATGTGAAGCCAAAAATCCTTAGGAGG...GAGCTTCTCATCAGCATCAATGTGAAGCCAAAAATCCTTAGGAGGACAGAGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS TCA 90 bp | CTCCACCAACTCCAGGGTCCAGCACAGACTCTCGCAGAGTGGAAATaGAGGACACAGGAACCACCGAGGAGGACAGACTTGCCATCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LHQLQGPAQTLAEWK*RTQEPPRRTDLPSQ Trigger: CTGAGATGGCAAGTCTGTCCTCCTCGGTGGTTCCTGTGTCCTTCATTTCCACTCTGCGAGAGTCTGTGCTGGACCCTGGAGTTGGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CAA 90 bp | AGAAGATTGGGCTGCATCTCAAGGGTTGAGAAAGATTTCACCAGCTGCACAGAGAAAGGTGCTGTCCCCTaGCCAAGCCAGCTGCCATCT | + |
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Preference number: 5 (lower is better) Translates to: RRLGCISRVEKDFTSCTEKGAVP*PSQLPS Trigger: AGATGGCAGCTGGCTTGGCAAGGGGACAGCACCTTT...CTCTGTGCAGCTGGTGAAATCTTTCTCAACCCTTGAGATGCAGCCCAATCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CAA 90 bp | TCCCTCTGTCCTCCTAAGGATTTTTGGCTTCACATTGATGCTGATGAGAAGCTCTGGGGAAATTCCAGGTaGCACAGTGTGGCCGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: SLCPPKDFWLHIDADEKLWGNSR*HSVAAG Trigger: ACCTGCGGCCACACTGTGCAACCTGGAATTTCCCCA...GAGCTTCTCATCAGCATCAATGTGAAGCCAAAAATCCTTAGGAGGACAGAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CAA 90 bp | ACAGAGCAGAAGATGCATCCAATTGGTGATGACGTGATGAGTCCGCCCAGGTGGGCTGCATCTCAAGGGTaGAGAAAGATTTCACCAGCT | + |
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Preference number: 5 (lower is better) Translates to: TEQKMHPIGDDVMSPPRWAASQG*RKISPA Trigger: AGCTGGTGAAATCTTTCTCAACCCTTGAGATGCAGC...CCACCTGGGCGGACTCATCACGTCATCACCAATTGGATGCATCTTCTGCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CAA 90 bp | TGCACAGAGCAGAAGATGCATCCAATTGGTGATGACGTGATGAGTCCGCCCAGGTTAAGGAGATATGTTTaGGCAGAATCACCTTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: CTEQKMHPIGDDVMSPPRLRRYV*AESPCC Trigger: GCAGCAAGGTGATTCTGCCAAAACATATCTCCTTAA...CCTGGGCGGACTCATCACGTCATCACCAATTGGATGCATCTTCTGCTCTGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CAA 90 bp | GTGAGGGACTCCCTCTGTCCTCCTAAGGATTTTTGGCTTCACATTGATGCTGATATTTTTGGCTTCACATaGATGCTGATGAGAAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VRDSLCPPKDFWLHIDADIFGFT*MLMRSS Trigger: GGAGCTTCTCATCAGCATCAATGTGAAGCCAAAAAT...ATCAGCATCAATGTGAAGCCAAAAATCCTTAGGAGGACAGAGGGAGTCCCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CAA 90 bp | AATCCAGATGTTAGGAGAAGATTGGGCTGCATCTCAAGGGTTGAGAAAGATTTCTGTGATAAAGACAGTTaGCTCCTCTGCTTGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: NPDVRRRLGCISRVEKDFCDKDS*LLCLSL Trigger: CAGTGACAAGCAGAGGAGCAAACTGTCTTTATCACA...GAAATCTTTCTCAACCCTTGAGATGCAGCCCAATCTTCTCCTAACATCTGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS-3UTR CAA 90 bp | ATTGATGCTGATGAGAAGCTCCAGTTGGCTTTTAAGGAGATATGTTTTGGCAGAGATGTTAGGAGAAGATaGGGCTGCATCTCAAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: IDADEKLQLAFKEICFGRDVRRR*GCISRV Trigger: AACCCTTGAGATGCAGCCCAATCTTCTCCTAACATC...TCTGCCAAAACATATCTCCTTAAAAGCCAACTGGAGCTTCTCATCAGCATCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS TCA 72 bp | GCTGCAGTGTGGATGATAGACAGTGTCAGGTGGTGCTaGGGCTGCTGGAACCTCCTCTGGGTTCCAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: AAVWMIDSVRWC*GCWNLLWVPAG Trigger: TCCTGCTGGAACCCAGAGGAGGTTCCAGCAGCCTCAGCACCACCTGACACTGTCTATCATCCACACTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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| CDS GCA 72 bp | CTTTTAAGGAGATATGTTTTGGCAGAATCACCTTGCTaGAGTGTGGATGATAGACAGTGTCAGGTGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLRRYVLAESPC*SVDDRQCQVVL Trigger: CAGCACCACCTGACACTGTCTATCATCCACACTGCAGCAAGGTGATTCTGCCAAAACATATCTCCTTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528446.1 |
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