RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARMCX3 (Homo sapiens)

Ensembl gene IDs: ENSG00000102401

Ensembl transcript IDs: ENST00000341189.8, ENST00000467808.5, ENST00000471229.7, ENST00000477980.6, ENST00000479298.5, ENST00000491568.6, ENST00000537169.1

Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCTCCCACAGAAGCTTTTaGCTCCTCTGTGCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLSHRSF*LLCALR
Trigger: TCTGAGAGCACAGAGGAGGCAAAAGCTTCTGTGGGA...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR GCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCGCCTTTCTCACACCATaGCCCCCTTGTCTTGTCTCA +
Preference number: 2 (lower is better)
Translates to: PPLGCERLHFATPSLTLLAFLTP*PPCLVS
Trigger: TGAGACAAGACAAGGGGGGCATGGTGTGAGAAAGGC...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR GCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCCTTTTGCCTCCTCTGTaGTCTCAGAGGGAACATCTG +
Preference number: 2 (lower is better)
Translates to: PPLGCERLHFATPSLTLLLLPPL*SQREHL
Trigger: CAGATGTTCCCTCTGAGAGCACAGAGGAGGCAAAAG...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR GCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTCTTTTGCCTCCTCTGTaGTCTCAGAGGGAACATCTG +
Preference number: 2 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLILLPPL*SQREHL
Trigger: CAGATGTTCCCTCTGAGAGCACAGAGGAGGCAAAAG...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR TCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGATTGCCACCTCCTCTGTaGAGCTTTAGCCGACTAGCA +
Preference number: 2 (lower is better)
Translates to: GCERLHFATPSLTLLSNRLPPPL*SFSRLA
Trigger: TGCTAGTCGGCTAAAGCTTCACAGAGGAGGTGGCAA...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR CCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCACAATTCTCCACAACTaGCTTCACCCAGCTTTCCAA +
Preference number: 2 (lower is better)
Translates to: PPLGCERLHFATPSLTLLTILHN*LHPAFQ
Trigger: TTGGAAAGCTGGGTGAAGCCAGTTGTGGAGAATTGT...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR GCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGACTTTTGCCTCCTCTGTaGTCTCAGAGGGAACATCTG +
Preference number: 2 (lower is better)
Translates to: GCERLHFATPSLTLLSNRLLPPL*SQREHL
Trigger: CAGATGTTCCCTCTGAGAGCACAGAGGAGGCAAAAG...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR GCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGATCCCACAGAAGCTTTTaGCTCCTCTGTGCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: GCERLHFATPSLTLLSNRSHRSF*LLCALR
Trigger: TCTGAGAGCACAGAGGAGGCAAAAGCTTCTGTGGGA...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR CAA 90 bp TGGCCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATaGACACTACTCAGTAATAGAGACTTTCATATGGACCCCAATTAT +
Preference number: 2 (lower is better)
Translates to: WPPLGCERLHFATPS*TLLSNRDFHMDPNY
Trigger: ATAATTGGGGTCCATATGAAAGTCTCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR TCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACTTGCCACCTCCTCTGTaGAGCTTTAGCCGACTAGCA +
Preference number: 2 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYLPPPL*SFSRLA
Trigger: TGCTAGTCGGCTAAAGCTTCACAGAGGAGGTGGCAA...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR CCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCTTACTCATGATGAATTaGTTCACTGTCACTTATGCA +
Preference number: 2 (lower is better)
Translates to: PPLGCERLHFATPSLTLLLLMMN*FTVTYA
Trigger: TGCATAAGTGACAGTGAACCAATTCATCATGAGTAA...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR TCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAGCCACCACTAGGATGTaGAAGGCTCCATTTTGCCAC +
Preference number: 2 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPATTRM*KAPFCH
Trigger: GTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGGC...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR GCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACGGACTCATTTTCAATTaGCACCTCCTCTGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYGLIFN*HLLCEA
Trigger: AGCTTCACAGAGGAGGTGGCAATTGAAAATGAGTCC...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR CCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGATTACTCATGATGAATTaGTTCACTGTCACTTATGCA +
Preference number: 2 (lower is better)
Translates to: GCERLHFATPSLTLLSNRLLMMN*FTVTYA
Trigger: TGCATAAGTGACAGTGAACCAATTCATCATGAGTAA...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR TCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATTGCCACACCCTCATTaGCACTACTCAGTAATAGAG +
Preference number: 2 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPLPHPH*HYSVIE
Trigger: CTCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAA...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR CCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAACAATTCTCCACAACTaGCTTCACCCAGCTTTCCAA +
Preference number: 2 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPTILHN*LHPAFQ
Trigger: TTGGAAAGCTGGGTGAAGCCAGTTGTGGAGAATTGT...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR CCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACTTACTCATGATGAATTaGTTCACTGTCACTTATGCA +
Preference number: 2 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYLLMMN*FTVTYA
Trigger: TGCATAAGTGACAGTGAACCAATTCATCATGAGTAA...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR CAA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCCTTACTCATGATGAATaGGTTCACTGTCACTTATGC +
Preference number: 3 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLLTHDE*VHCHLC
Trigger: GCATAAGTGACAGTGAACCAATTCATCATGAGTAAG...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR CAA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCCTGTTATCTTTTGGTTaGTACGTTTCTTATCTCTCC +
Preference number: 3 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLLLSFG*YVSYLS
Trigger: GGAGAGATAAGAAACGTACAAACCAAAAGATAACAG...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR CAA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACTTTGCCACACCCTCATaGACACTACTCAGTAATAGA +
Preference number: 3 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYFATPS*TLLSNR
Trigger: TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAA...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR CAA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACCTTACTCATGATGAATaGGTTCACTGTCACTTATGC +
Preference number: 3 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYLTHDE*VHCHLC
Trigger: GCATAAGTGACAGTGAACCAATTCATCATGAGTAAG...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR-3UTR CAA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCACTGTTATCTTTTGGTTaGTACGTTTCTTATCTCTCC +
Preference number: 3 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPLLSFG*YVSYLS
Trigger: GGAGAGATAAGAAACGTACAAACCAAAAGATAACAG...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCGGGGAAGCCCGTTTCTaGACAGCCCGACGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLGEARF*TARRAR
Trigger: CCGGGCACGTCGGGCTGTCCAGAAACGGGCTTCCCC...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCCTGGACAGCCCGACGTaGCCGGGTAGCCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLLDSPT*PGSPGP
Trigger: AGGGCCAGGGCTACCCGGGCACGTCGGGCTGTCCAG...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCGCGGGACATATGTCTTaGAAAGCGGGCGGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLAGHMS*KAGGEW
Trigger: CCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGC...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537169.1
CDS-3UTR TCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCCAGCTCTTGGTCACGTaGGGGCTACGTCATCCACCA +
Preference number: 4 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLQLLVT*GLRHPP
Trigger: TGGTGGATGACGTAGCCCTCACGTGACCAAGAGCTG...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341189.8
CDS-3UTR CCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCCTGGGCTCAAGCCTGTaGAGGGTGATCGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLLGSSL*RVIVFS
Trigger: GCTGAAGACGATCACCCTCCACAGGCTTGAGCCCAG...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCGGGGGAGGAAGGCTGTaGGACTGGGCTCAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLGGGRL*DWAQAC
Trigger: ACAGGCTTGAGCCCAGTCCCACAGCCTTCCTCCCCC...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCAAAGAGGGAGCCCAGTaGAGATGGTACTTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLKEGAQ*RWYLGP
Trigger: AGGGCCCAAGTACCATCTTCACTGGGCTCCCTCTTT...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTCACCCGGGAGAGGCTTaGACCCACTGCAGGGATTCG +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLIHPGEA*THCRDS
Trigger: CGAATCCCTGCAGTGGGTCCAAGCCTCTCCCGGGTG...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341189.8
CDS-3UTR CCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTGGAAGGCTGTGGGACTaGGCTCAAGCCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLIGRLWD*AQACGG
Trigger: CCCTCCACAGGCTTGAGCCCAGTCCCACAGCCTTCC...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCCAAGGCCACAAGAGCTaGTTCTGGGGGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLQGHKS*FWGLTS
Trigger: GGAGGTCAACCCCCAGAATCAGCTCTTGTGGCCTTG...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCTTGCCACCTCCTCTGTaGAGCTTTAGCCGACTAGCA +
Preference number: 4 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLLPPPL*SFSRLA
Trigger: TGCTAGTCGGCTAAAGCTTCACAGAGGAGGTGGCAA...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCCCCTCCCACCAGCAGTaGGGCAGAAGAGGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSPSHQQ*GRRGPA
Trigger: GGCGGGCCCTCTTCTGCCGCACTGCTGGTGGGAGGG...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341189.8
CDS-3UTR GCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCTCCTTCCTCTTCTTTTaGCTGGCGTTGTGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLSFLFF*LALCRN
Trigger: GTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGA...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCCTGGACAGCCCGACGTaGCCGGGTAGCCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFLDSPT*PGSPGP
Trigger: AGGGCCAGGGCTACCCGGGCACGTCGGGCTGTCCAG...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGGGCAGTGGGGAGCTaGTACTCAGACGGGAACAAC +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLRAVGS*YSDGNN
Trigger: GTTGTTCCCGTCTGAGTACCAGCTCCCCACTGCCCT...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341189.8
ENST00000471229.7
CDS-3UTR CCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTCACCCGGGAGAGGCTTaGACCCACGTTTCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLIHPGEA*THVSQH
Trigger: ATGCTGCGAAACGTGGGTCCAAGCCTCTCCCGGGTG...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537169.1
CDS-3UTR TCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCAGCAAGCTGCACAGATaGGTTCAAGCGAGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLSKLHR*VQARSD
Trigger: ATCACTTCTCGCTTGAACTCATCTGTGCAGCTTGCT...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTAAAGAGGGAGCCCAGTaGAGATGGTACTTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLIKEGAQ*RWYLGP
Trigger: AGGGCCCAAGTACCATCTTCACTGGGCTCCCTCTTT...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCGAGGCTTGGACCCACTaGAGGGATTCGGGACAATTT +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLEAWTH*RDSGQF
Trigger: AAATTGTCCCGAATCCCTGCAGTGGGTCCAAGCCTC...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341189.8
CDS-3UTR GCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCTCAAGCGGAGCCACCTaGTACAGCAGACCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLSSGAT*YSRPSN
Trigger: ATTTGAGGGTCTGCTGTAGCAGGTGGCTCCGCTTGA...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCGGTAGCCCTGGCCCTTaGCCTGGCCCTAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFGSPGP*PGPSSG
Trigger: ACCAGAGCTAGGGCCAGGGCAAGGGCCAGGGCTACC...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACCTGGACAGCCCGACGTaGCCGGGTAGCCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYLDSPT*PGSPGP
Trigger: AGGGCCAGGGCTACCCGGGCACGTCGGGCTGTCCAG...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCTCCTCTTCTTTTGCCTaGCGTTGTGCCGCAACCTAC +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLSSSFA*RCAATY
Trigger: GTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGA...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCTGGGATCCCGAGTATTaGGAATCTTTGCGACAATTG +
Preference number: 4 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLWDPEY*ESLRQL
Trigger: CAATTGTCGCAAAGATTCTCAATACTCGGGATCCCA...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCTTTTGCCTGGCGTTGTaGCGCAACCTACAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLFCLAL*RNLQKD
Trigger: GTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAA...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTTCAAGCGGAGCCACCTaGTACAGCAGACCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLISSGAT*YSRPSN
Trigger: ATTTGAGGGTCTGCTGTAGCAGGTGGCTCCGCTTGA...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTGCCTTTCTCACACCATaGCCCCCTTGTCTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLIAFLTP*PPCLVS
Trigger: TGAGACAAGACAAGGGGGGCATGGTGTGAGAAAGGC...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTTCCTCTTCTTTTGCCTaGCGTTGTGCCGCAACCTAC +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLISSSFA*RCAATY
Trigger: GTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGA...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCGGGGGAGGAAGGCTGTaGGACTGGGCTCAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFGGGRL*DWAQAC
Trigger: ACAGGCTTGAGCCCAGTCCCACAGCCTTCCTCCCCC...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGAAGTAGTCACTCAGGCTaGGGGAGGAAGGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRSSHSG*GRKAVG
Trigger: TCCCACAGCCTTCCTCCCCCAGCCTGAGTGACTACT...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTACCAGTCATTATACCTaGCCCCAGAACAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLITSHYT*PQNSPQ
Trigger: CTGGGGACTGTTCTGGGGCCAGGTATAATGACTGGT...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCAGTTCAAGCGAGAAGTaGTTGTGTCATCACACACTT +
Preference number: 4 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLSSSEK*LCHHTL
Trigger: AAGTGTGTGATGACACAATCACTTCTCGCTTGAACT...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACGGTAGCCCTGGCCCTTaGCCTGGCCCTAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYGSPGP*PGPSSG
Trigger: ACCAGAGCTAGGGCCAGGGCAAGGGCCAGGGCTACC...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCAGTATTGAGAATCTTTaGGACAATTGGGAGACCACC +
Preference number: 4 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLSIENL*DNWETT
Trigger: GGTGGTCTCCCAATTGTCGCAAAGATTCTCAATACT...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGACCCAGCCTACTTTCCTaGCGTAGCCCATGCAATCGT +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRPSLLS*RSPCNR
Trigger: ACGATTGCATGGGCTACGCCAGGAAAGTAGGCTGGG...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAGGGGAAGCCCGTTTCTaGACAGCCCGACGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPGEARF*TARRAR
Trigger: CCGGGCACGTCGGGCTGTCCAGAAACGGGCTTCCCC...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGACCCTCCCCCGAGCTATaGAAGTCTACCATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRPSPEL*KSTISS
Trigger: AGAGGAAATGGTAGACTTTCATAGCTCGGGGGAGGG...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341189.8
CDS-3UTR TCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCTGGGATCCCGAGTATTaGGAATCTTTGCGACAATTG +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLWDPEY*ESLRQL
Trigger: CAATTGTCGCAAAGATTCTCAATACTCGGGATCCCA...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCACTTTAAGCCTGCGCTaGTTTTCAGCATTCACACTC +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLTLSLR*FSAFTL
Trigger: GAGTGTGAATGCTGAAAATCAGCGCAGGCTTAAAGT...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTAGCAAGCTGCACAGATaGGTTCAAGCGAGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLISKLHR*VQARSD
Trigger: ATCACTTCTCGCTTGAACTCATCTGTGCAGCTTGCT...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCTTGCCACACCCTCATTaGCACTACTCAGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLLPHPH*HYSVIE
Trigger: CTCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAA...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCGGACTCATTTTCAATTaGCACCTCCTCTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLGLIFN*HLLCEA
Trigger: AGCTTCACAGAGGAGGTGGCAATTGAAAATGAGTCC...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCGACGGCATCTTCCCCTaGGGCTATGGGCCACTTGTA +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSDGIFP*GYGPLV
Trigger: TACAAGTGGCCCATAGCCCCAGGGGAAGATGCCGTC...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341189.8
CDS-3UTR CCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCAGGGCAGTGGGGAGCTaGTACTCAGACGGGAACAAC +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFRAVGS*YSDGNN
Trigger: GTTGTTCCCGTCTGAGTACCAGCTCCCCACTGCCCT...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341189.8
ENST00000471229.7
CDS-3UTR CCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGATCCTCTTCTTTTGCCTaGCGTTGTGCCGCAACCTAC +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRSSSFA*RCAATY
Trigger: GTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGA...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCCTGGGCTCAAGCCTGTaGAGGGTGATCGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSLGSSL*RVIVFS
Trigger: GCTGAAGACGATCACCCTCCACAGGCTTGAGCCCAG...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCAGTAGTCACTCAGGCTaGGGGAGGAAGGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFSSHSG*GRKAVG
Trigger: TCCCACAGCCTTCCTCCCCCAGCCTGAGTGACTACT...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAATCCGAGCCCAAGGTaGGTACCATACTATACTCTT +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLNPSPR*VPYYTL
Trigger: AAGAGTATAGTATGGTACCCACCTTGGGCTCGGATT...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCTTATTCCTGGCTCTTTaGGAACATATGTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLLFLAL*EHMFSK
Trigger: CTTGCTGAACATATGTTCCCAAAGAGCCAGGAATAA...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTTTTTCCCTAGTGGTGTaGCACTCCCAACAATCTTTC +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLIFSLVV*HSQQSF
Trigger: GAAAGATTGTTGGGAGTGGCACACCACTAGGGAAAA...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGACTCAGTCCAGCAAGCTaGACAGATGAGTTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRLSPAS*TDEFKR
Trigger: TCGCTTGAACTCATCTGTGCAGCTTGCTGGACTGAG...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCAACCTACAGAAAGACTaGCCACCCGGGAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSNLQKD*PPGRGL
Trigger: CAAGCCTCTCCCGGGTGGCCAGTCTTTCTGTAGGTT...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341189.8
ENST00000537169.1
CDS-3UTR CCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAGGAAGGCTGTGGGACTaGGCTCAAGCCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPGRLWD*AQACGG
Trigger: CCCTCCACAGGCTTGAGCCCAGTCCCACAGCCTTCC...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCCCCAGCCTACTTTCCTaGCGTAGCCCATGCAATCGT +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFPSLLS*RSPCNR
Trigger: ACGATTGCATGGGCTACGCCAGGAAAGTAGGCTGGG...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTAATCCGAGCCCAAGGTaGGTACCATACTATACTCTT +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLINPSPR*VPYYTL
Trigger: AAGAGTATAGTATGGTACCCACCTTGGGCTCGGATT...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGACGGTATCATCTGAATTaGGGGAAGCCCGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRRYHLN*GKPVSG
Trigger: TCCAGAAACGGGCTTCCCCCAATTCAGATGATACCG...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGACTTTCCAATCTCTACTaGTCGGAGGAAACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRLSNLY*SEETSS
Trigger: GGAGGAAGTTTCCTCCGATCAGTAGAGATTGGAAAG...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACCAAGGCCACAAGAGCTaGTTCTGGGGGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYQGHKS*FWGLTS
Trigger: GGAGGTCAACCCCCAGAATCAGCTCTTGTGGCCTTG...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGACAAAACGGTATCATCTaGATTGGGGGAAGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRQNGII*IGGSPF
Trigger: AAACGGGCTTCCCCCAATTCAGATGATACCGTTTTG...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCTTGCCACCTCCTCTGTaGAGCTTTAGCCGACTAGCA +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSLPPPL*SFSRLA
Trigger: TGCTAGTCGGCTAAAGCTTCACAGAGGAGGTGGCAA...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCTTGCCACCTCCTCTGTaGAGCTTTAGCCGACTAGCA +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFLPPPL*SFSRLA
Trigger: TGCTAGTCGGCTAAAGCTTCACAGAGGAGGTGGCAA...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCGCCACCACTAGGATGTaGAAGGCTCCATTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSATTRM*KAPFCH
Trigger: GTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGGC...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCGCCACCACTAGGATGTaGAAGGCTCCATTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFATTRM*KAPFCH
Trigger: GTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGGC...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACAGTAGTCACTCAGGCTaGGGGAGGAAGGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYSSHSG*GRKAVG
Trigger: TCCCACAGCCTTCCTCCCCCAGCCTGAGTGACTACT...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCACAAGGCCACAAGAGCTaGTTCTGGGGGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPQGHKS*FWGLTS
Trigger: GGAGGTCAACCCCCAGAATCAGCTCTTGTGGCCTTG...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGGAGTTTCAGAACCTaGAGTTTGGTTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLRSFRT*SLVSSF
Trigger: AAATGAAGAAACCAAACTTCAGGTTCTGAAACTCCT...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGCCACCACTAGGATGTaGAAGGCTCCATTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYAATTRM*KAPFCH
Trigger: GTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGGC...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCTTTTGCCTGGCGTTGTaGCGCAACCTACAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSFCLAL*RNLQKD
Trigger: GTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAA...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCATCCTTCCTCTTCTTTTaGCTGGCGTTGTGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYASFLFF*LALCRN
Trigger: GTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGA...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCACCATACTATACTCTTaGTCTCATTGCTGTCATCAT +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLTILYS*SHCCHH
Trigger: ATGATGACAGCAATGAGAGCAAGAGTATAGTATGGT...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCCTCAGTCCAGCAAGCTaGACAGATGAGTTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSLSPAS*TDEFKR
Trigger: TCGCTTGAACTCATCTGTGCAGCTTGCTGGACTGAG...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCCTTTTGCCTCCTCTGTaGTCTCAGAGGGAACATCTG +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSLLPPL*SQREHL
Trigger: CAGATGTTCCCTCTGAGAGCACAGAGGAGGCAAAAG...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCTCCCACAGAAGCTTTTaGCTCCTCTGTGCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFSHRSF*LLCALR
Trigger: TCTGAGAGCACAGAGGAGGCAAAAGCTTCTGTGGGA...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCTCCCACAGAAGCTTTTaGCTCCTCTGTGCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSSHRSF*LLCALR
Trigger: TCTGAGAGCACAGAGGAGGCAAAAGCTTCTGTGGGA...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCACTGGGCTCAAGCCTGTaGAGGGTGATCGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPLGSSL*RVIVFS
Trigger: GCTGAAGACGATCACCCTCCACAGGCTTGAGCCCAG...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACCCCAGCCTACTTTCCTaGCGTAGCCCATGCAATCGT +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYPSLLS*RSPCNR
Trigger: ACGATTGCATGGGCTACGCCAGGAAAGTAGGCTGGG...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAACCAGTCATTATACCTaGCCCCAGAACAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYATSHYT*PQNSPQ
Trigger: CTGGGGACTGTTCTGGGGCCAGGTATAATGACTGGT...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCCGGTATCATCTGAATTaGGGGAAGCCCGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSRYHLN*GKPVSG
Trigger: TCCAGAAACGGGCTTCCCCCAATTCAGATGATACCG...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCAGTGAAGATGGTACTTaGGCCCTGAGCAGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSSEDGT*ALSSSL
Trigger: TAGGGAACTGCTCAGGGCCCAAGTACCATCTTCACT...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTTTATTCCTGGCTCTTTaGGAACATATGTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLILFLAL*EHMFSK
Trigger: CTTGCTGAACATATGTTCCCAAAGAGCCAGGAATAA...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGAACAATTCTCCACAACTaGCTTCACCCAGCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRTILHN*LHPAFQ
Trigger: TTGGAAAGCTGGGTGAAGCCAGTTGTGGAGAATTGT...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCTTCGCAGCATCGAAATaGGCTGCAAGCGGGACATAT +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSFAASK*AASGTY
Trigger: ATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAA...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537169.1
CDS-3UTR TCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCCAAAACGGTATCATCTaGATTGGGGGAAGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSQNGII*IGGSPF
Trigger: AAACGGGCTTCCCCCAATTCAGATGATACCGTTTTG...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGAAGTTCAAGCGAGAAGTaGTTGTGTCATCACACACTT +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRSSSEK*LCHHTL
Trigger: AAGTGTGTGATGACACAATCACTTCTCGCTTGAACT...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAAAAGAGGGAGCCCAGTaGAGATGGTACTTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPKEGAQ*RWYLGP
Trigger: AGGGCCCAAGTACCATCTTCACTGGGCTCCCTCTTT...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACTCCTTCCTCTTCTTTTaGCTGGCGTTGTGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYSFLFF*LALCRN
Trigger: GTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGA...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACTCAAGCGGAGCCACCTaGTACAGCAGACCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYSSGAT*YSRPSN
Trigger: ATTTGAGGGTCTGCTGTAGCAGGTGGCTCCGCTTGA...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCACTCAGTCCAGCAAGCTaGACAGATGAGTTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYALSPAS*TDEFKR
Trigger: TCGCTTGAACTCATCTGTGCAGCTTGCTGGACTGAG...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCACTTTTGCCTCCTCTGTaGTCTCAGAGGGAACATCTG +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYALLPPL*SQREHL
Trigger: CAGATGTTCCCTCTGAGAGCACAGAGGAGGCAAAAG...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCTGTGTGAACATTCCTTaGTTTATAACCAATCCAATG +
Preference number: 4 (lower is better)
Translates to: PPLGCERLHFATPSLTLLCVNIP*FITNPM
Trigger: CATTGGATTGGTTATAAAGCAAGGAATGTTCACACA...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGAAACCTACAGAAAGACTaGAGGGATTCGGGACAATTT +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRNLQKD*RDSGQF
Trigger: AAATTGTCCCGAATCCCTGCAGTCTTTCTGTAGGTT...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471229.7
CDS-3UTR CCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCACGGTATCATCTGAATTaGGGGAAGCCCGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYARYHLN*GKPVSG
Trigger: TCCAGAAACGGGCTTCCCCCAATTCAGATGATACCG...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAAGTGAAGATGGTACTTaGGCCCTGAGCAGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYASEDGT*ALSSSL
Trigger: TAGGGAACTGCTCAGGGCCCAAGTACCATCTTCACT...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
3UTR CAA 72 bp CTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATaGACACTACTCAGTAATAGAGACTTTCATATGGAC +
Preference number: 4 (lower is better)
Translates to: LGCERLHFATPS*TLLSNRDFHMD
Trigger: GTCCATATGAAAGTCTCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCACTTTAAGCCTGCGCTaGTTTTCAGCATTCACACTC +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSTLSLR*FSAFTL
Trigger: GAGTGTGAATGCTGAAAATCAGCGCAGGCTTAAAGT...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAAGCAAGCTGCACAGATaGGTTCAAGCGAGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYASKLHR*VQARSD
Trigger: ATCACTTCTCGCTTGAACTCATCTGTGCAGCTTGCT...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCTTGCCACACCCTCATTaGCACTACTCAGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSLPHPH*HYSVIE
Trigger: CTCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAA...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCTTTTCCCTAGTGGTGTaGCACTCCCAACAATCTTTC +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSFSLVV*HSQQSF
Trigger: GAAAGATTGTTGGGAGTGGCACACCACTAGGGAAAA...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCTTTTCCCTAGTGGTGTaGCACTCCCAACAATCTTTC +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFFSLVV*HSQQSF
Trigger: GAAAGATTGTTGGGAGTGGCACACCACTAGGGAAAA...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGATACTCTTGCTCTCATTaGTGTCATCATCATCATCAG +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRYSCSH*CHHHHQ
Trigger: CTGATGATGATGATGACAGCAATGAGAGCAAGAGTA...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTTTCCAATCAATCACTTaGTTCATTCCCAACACTTTT +
Preference number: 4 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLIFQSIT*FIPNTF
Trigger: AAAAGTGTTGGGAATGAAGCAAGTGATTGATTGGAA...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCAATCCGAGCCCAAGGTaGGTACCATACTATACTCTT +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFNPSPR*VPYYTL
Trigger: AAGAGTATAGTATGGTACCCACCTTGGGCTCGGATT...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGATTCCCTAGTCATGGCTaGATTTTCAGCCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRFPSHG*IFSQIQ
Trigger: TTGAATTTGGCTGAAAATCCAGCCATGACTAGGGAA...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCACAATTCTCCACAACTaGCTTCACCCAGCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFTILHN*LHPAFQ
Trigger: TTGGAAAGCTGGGTGAAGCCAGTTGTGGAGAATTGT...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGAGTGTCATCACACACTTaGTTCATGTATACTTTAAGC +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRVSSHT*FMYTLS
Trigger: GCTTAAAGTATACATGAATCAAGTGTGTGATGACAC...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGAAGGAGTTTCAGAACCTaGAGTTTGGTTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRRSFRT*SLVSSF
Trigger: AAATGAAGAAACCAAACTTCAGGTTCTGAAACTCCT...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGACAGCAAGTTTGGCCATaGATTTTCCAACTTTTACTT +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRQQVWP*IFQLLL
Trigger: AAGTAAAAGTTGGAAAATTCATGGCCAAACTTGCTG...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAGACAAGAAGGACTTCTaGACACGTCAGCTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPDKKDF*TRQLLV
Trigger: GACCAAGAGCTGACGTGTGCAGAAGTCCTTCTTGTC...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341189.8
CDS-3UTR GCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCACTTTTGCCTCCTCTGTaGTCTCAGAGGGAACATCTG +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPLLPPL*SQREHL
Trigger: CAGATGTTCCCTCTGAGAGCACAGAGGAGGCAAAAG...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCCCACAGAAGCTTTTaGCTCCTCTGTGCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPSHRSF*LLCALR
Trigger: TCTGAGAGCACAGAGGAGGCAAAAGCTTCTGTGGGA...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGGACTCATTTTCAATTaGCACCTCCTCTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYAGLIFN*HLLCEA
Trigger: AGCTTCACAGAGGAGGTGGCAATTGAAAATGAGTCC...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACAATCTTTGCGACAATTaGGAGACCACCCAGATCACG +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYNLCDN*ETTQIT
Trigger: CGTGATCTGGGTGGTCTCCCAATTGTCGCAAAGATT...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAAGTGAAGATGGTACTTaGGCCCTGAGCAGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPSEDGT*ALSSSL
Trigger: TAGGGAACTGCTCAGGGCCCAAGTACCATCTTCACT...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCACTTTCCAATCTCTACTaGTCGGAGGAAACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPLSNLY*SEETSS
Trigger: GGAGGAAGTTTCCTCCGATCAGTAGAGATTGGAAAG...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCACAAAACGGTATCATCTaGATTGGGGGAAGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPQNGII*IGGSPF
Trigger: AAACGGGCTTCCCCCAATTCAGATGATACCGTTTTG...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACTGGGATCCCGAGTATTaGGAATCTTTGCGACAATTG +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYWDPEY*ESLRQL
Trigger: CAATTGTCGCAAAGATTCTCAATACTCGGGATCCCA...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAAGTTCAAGCGAGAAGTaGTTGTGTCATCACACACTT +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYASSSEK*LCHHTL
Trigger: AAGTGTGTGATGACACAATCACTTCTCGCTTGAACT...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACTTGCCACACCCTCATTaGCACTACTCAGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYLPHPH*HYSVIE
Trigger: CTCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAA...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGATGTGTGAACATTCCTTaGTTTATAACCAATCCAATG +
Preference number: 4 (lower is better)
Translates to: GCERLHFATPSLTLLSNRCVNIP*FITNPM
Trigger: CATTGGATTGGTTATAAAGCAAGGAATGTTCACACA...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAAGCATCGAAATGGGCTaGAAGCGGGACATATGTCTT +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPSIEMG*KRDICL
Trigger: AAGACATATGTCCCGCTTGCAGCCCATTTCGATGCT...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537169.1
CDS-3UTR CCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAAATCTTTGCGACAATTaGGAGACCACCCAGATCACG +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPNLCDN*ETTQIT
Trigger: CGTGATCTGGGTGGTCTCCCAATTGTCGCAAAGATT...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCTTCCCTAGTCATGGCTaGATTTTCAGCCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSFPSHG*IFSQIQ
Trigger: TTGAATTTGGCTGAAAATCCAGCCATGACTAGGGAA...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCATCTGTATTACCAAATaGCCACCACTAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSICITK*PPLGCE
Trigger: TTCACATCCTAGTGGTGGCCATTTGGTAATACAGAT...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAACTTTAAGCCTGCGCTaGTTTTCAGCATTCACACTC +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPTLSLR*FSAFTL
Trigger: GAGTGTGAATGCTGAAAATCAGCGCAGGCTTAAAGT...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCGTGTCATCACACACTTaGTTCATGTATACTTTAAGC +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSVSSHT*FMYTLS
Trigger: GCTTAAAGTATACATGAATCAAGTGTGTGATGACAC...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCACCATACTATACTCTTaGTCTCATTGCTGTCATCAT +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSTILYS*SHCCHH
Trigger: ATGATGACAGCAATGAGAGCAAGAGTATAGTATGGT...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACAGTATTGAGAATCTTTaGGACAATTGGGAGACCACC +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYSIENL*DNWETT
Trigger: GGTGGTCTCCCAATTGTCGCAAAGATTCTCAATACT...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCATTATTCCTGGCTCTTTaGGAACATATGTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYALFLAL*EHMFSK
Trigger: CTTGCTGAACATATGTTCCCAAAGAGCCAGGAATAA...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCACAGCAAGTTTGGCCATaGATTTTCCAACTTTTACTT +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYAQQVWP*IFQLLL
Trigger: AAGTAAAAGTTGGAAAATTCATGGCCAAACTTGCTG...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACTACTCTTGCTCTCATTaGTGTCATCATCATCATCAG +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYYSCSH*CHHHHQ
Trigger: CTGATGATGATGATGACAGCAATGAGAGCAAGAGTA...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAAGTATTGAGAATCTTTaGGACAATTGGGAGACCACC +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPSIENL*DNWETT
Trigger: GGTGGTCTCCCAATTGTCGCAAAGATTCTCAATACT...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCTGTGTGAACATTCCTTaGTTTATAACCAATCCAATG +
Preference number: 4 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFCVNIP*FITNPM
Trigger: CATTGGATTGGTTATAAAGCAAGGAATGTTCACACA...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACTTCCCTAGTCATGGCTaGATTTTCAGCCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYFPSHG*IFSQIQ
Trigger: TTGAATTTGGCTGAAAATCCAGCCATGACTAGGGAA...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCTTACTCATGATGAATTaGTTCACTGTCACTTATGCA +
Preference number: 4 (lower is better)
Translates to: RELTHDELVHCHLCRRNSLLMMN*FTVTYA
Trigger: TGCATAAGTGACAGTGAACCAATTCATCATGAGTAA...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACATCTGTATTACCAAATaGCCACCACTAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYICITK*PPLGCE
Trigger: TTCACATCCTAGTGGTGGCCATTTGGTAATACAGAT...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACCCACTTGTACTTTTATaGAAAATTGCCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYPLVLL*KIASSF
Trigger: GAAGGAAGAGGCAATTTTTCATAAAAGTACAAGTGG...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341189.8
CDS-3UTR TCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACGTGTCATCACACACTTaGTTCATGTATACTTTAAGC +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYVSSHT*FMYTLS
Trigger: GCTTAAAGTATACATGAATCAAGTGTGTGATGACAC...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACAGGAGTTTCAGAACCTaGAGTTTGGTTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYRSFRT*SLVSSF
Trigger: AAATGAAGAAACCAAACTTCAGGTTCTGAAACTCCT...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR TCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACCAGCAAGTTTGGCCATaGATTTTCCAACTTTTACTT +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYQQVWP*IFQLLL
Trigger: AAGTAAAAGTTGGAAAATTCATGGCCAAACTTGCTG...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACACCATACTATACTCTTaGTCTCATTGCTGTCATCAT +
Preference number: 4 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYTILYS*SHCCHH
Trigger: ATGATGACAGCAATGAGAGCAAGAGTATAGTATGGT...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCATTCCAATCAATCACTTaGTTCATTCCCAACACTTTT +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYAFQSIT*FIPNTF
Trigger: AAAAGTGTTGGGAATGAAGCAAGTGATTGATTGGAA...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCATTACTCATGATGAATTaGTTCACTGTCACTTATGCA +
Preference number: 4 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYALLMMN*FTVTYA
Trigger: TGCATAAGTGACAGTGAACCAATTCATCATGAGTAA...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAATCTGTATTACCAAATaGCCACCACTAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPICITK*PPLGCE
Trigger: TTCACATCCTAGTGGTGGCCATTTGGTAATACAGAT...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR GCA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATTCCAATCAATCACTTaGTTCATTCCCAACACTTTT +
Preference number: 4 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPFQSIT*FIPNTF
Trigger: AAAAGTGTTGGGAATGAAGCAAGTGATTGATTGGAA...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS CCA 90 bp AATGGGCTGCAAGCGGGACATATGTCTTGGAAAGCGGGCGGCGAGTaGGAGAGACGACGGAGGCGCCTCAGTACCCGCGACGGTCTCGGC +
Preference number: 5 (lower is better)
Translates to: NGLQAGHMSWKAGGE*ERRRRRLSTRDGLG
Trigger: GCCGAGACCGTCGCGGGTACTGAGGCGCCTCCGTCGTCTCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467808.5
ENST00000477980.6
ENST00000491568.6
CDS GCA 90 bp GGTGGACTAGGGGCCAACACCCAGGCCACAGCTCCCTTTCCGGATTaGGGCCCTAGGCTCCCAGCAGATTCCCATTTCCCAGTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: GGLGANTQATAPFPD*GPRLPADSHFPVSE
Trigger: CTCAGAGACTGGGAAATGGGAATCTGCTGGGAGCCTAGGGCCGCAATCCGGAAAGGGAGCTGTGGCCTGGGTGTTGGCCCCTAGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477980.6
CDS GCA 90 bp CCCCAAACACCCCGCAGCTCACCGTTTCGCAGCATCGAAATGGGCTaGAAGCGGGACATATGTCTTGGAAAGCGGGCGGCGAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: PQTPRSSPFRSIEMG*KRDICLGKRAASGR
Trigger: TCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGGTGAGCTGCGGGGTGTTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477980.6
CDS GCA 90 bp ACCCGGGAGAGGCTTGGACCCACGTTTCGCAGCATCGAAATGGGCTaGAAGCGGGACATATGTCTTGGAAAGCGGGCGGCGAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: TRERLGPTFRSIEMG*KRDICLGKRAASGR
Trigger: TCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGTGGGTCCAAGCCTCTCCCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491568.6
ENST00000537169.1
CDS CCA 90 bp GACGTTTCGCAGCATCGAAATGGGCTGCAAGCGGGACATATGTCTTaGAAAGCGGGCGGCGAGTGGGAGAGACGACGGAGGCGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: DVSQHRNGLQAGHMS*KAGGEWERRRRRLS
Trigger: ACTGAGGCGCCTCCGTCGTCTCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467808.5
CDS CCA 90 bp ACCGTTTCGCAGCATCGAAATGGGCTGCAAGCGGGACATATGTCTTaGAAAGCGGGCGGCGAGTGGGAGAGACGACGGAGGCGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: TVSQHRNGLQAGHMS*KAGGEWERRRRRLS
Trigger: ACTGAGGCGCCTCCGTCGTCTCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477980.6
CDS CCA 90 bp CACGTTTCGCAGCATCGAAATGGGCTGCAAGCGGGACATATGTCTTaGAAAGCGGGCGGCGAGTGGGAGAGACGACGGAGGCGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: HVSQHRNGLQAGHMS*KAGGEWERRRRRLS
Trigger: ACTGAGGCGCCTCCGTCGTCTCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491568.6
CDS CCA 90 bp CTCTTCCCCAAACACCCCGCAGCTCACCGTTTCGCAGCATCGAAATaGGCTGCAAGCGGGACATATGTCTTGGAAAGCGGGCGGCGAGTG +
Preference number: 5 (lower is better)
Translates to: LFPKHPAAHRFAASK*AASGTYVLESGRRV
Trigger: CACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGGTGAGCTGCGGGGTGTTTGGGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477980.6
CDS CCA 90 bp TTCCTCTTCTTTTGCCTGGCGTTGTGCCGCAACCTACAGAAAGACTaGCCACCCGGGAGAGGCTTGGACCCACTGCAGGGATTCGGGACA +
Preference number: 5 (lower is better)
Translates to: FLFFCLALCRNLQKD*PPGRGLDPLQGFGT
Trigger: TGTCCCGAATCCCTGCAGTGGGTCCAAGCCTCTCCCGGGTGGCCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341189.8
CDS CCA 90 bp ACCCGCGACGGTCTCGGCCCTACGCCCTCAAGCACCCCGACTTTATaGAATCTTCCAGGTACTGACCTGCAGGGATTCGGGACAATTTCC +
Preference number: 5 (lower is better)
Translates to: TRDGLGPTPSSTPTL*NLPGTDLQGFGTIS
Trigger: GGAAATTGTCCCGAATCCCTGCAGGTCAGTACCTGGAAGATTCCATAAAGTCGGGGTGCTTGAGGGCGTAGGGCCGAGACCGTCGCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477980.6
ENST00000491568.6
CDS CCA 90 bp TTCCTCTTCTTTTGCCTGGCGTTGTGCCGCAACCTACAGAAAGACTaGCCACCCGGGAGAGGCTTGGACCCACTAGACACAGAGCCATGG +
Preference number: 5 (lower is better)
Translates to: FLFFCLALCRNLQKD*PPGRGLDPLDTEPW
Trigger: CCATGGCTCTGTGTCTAGTGGGTCCAAGCCTCTCCCGGGTGGCCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477980.6
CDS GCA 90 bp TGTGCCGCAACCTACAGAAAGACGTTTCGCAGCATCGAAATGGGCTaGAAGCGGGACATATGTCTTGGAAAGCGGGCGGCGAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: CAATYRKTFRSIEMG*KRDICLGKRAASGR
Trigger: TCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGTCTTTCTGTAGGTTGCGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467808.5
CDS CCA 90 bp TTCCTCTTCTTTTGCCTGGCGTTGTGCCGCAACCTACAGAAAGACTaGCCACCCGGGAGAGGCTTGGACCCACGTTTCGCAGCATCGAAA +
Preference number: 5 (lower is better)
Translates to: FLFFCLALCRNLQKD*PPGRGLDPRFAASK
Trigger: TTTCGATGCTGCGAAACGTGGGTCCAAGCCTCTCCCGGGTGGCCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491568.6
ENST00000537169.1
CDS GCA 90 bp CACCGATTAGGATTAAATTCCTTCCTCTTCTTTTGCCTGGCGTTGTaGCGCAACCTACAGAAAGACTGGCCACCCGGGAGAGGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: HRLGLNSFLFFCLAL*RNLQKDWPPGRGLD
Trigger: GTCCAAGCCTCTCCCGGGTGGCCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCCTAATCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341189.8
ENST00000477980.6
ENST00000491568.6
ENST00000537169.1
CDS-3UTR CAA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCTTCCTTCCTCTTCTTTaGCCTGGCGTTGTGCCGCAA +
Preference number: 5 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLFLPLL*PGVVPQ
Trigger: TTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAA...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS CCA 90 bp GGCCCTAGCTCTGGTTCCAGCTTCAGTCCCAATCCGAGCCCAAGGTaGGTACCATACTATACTCTTGCTCTCATTGCTGTCATCATCATC +
Preference number: 5 (lower is better)
Translates to: GPSSGSSFSPNPSPR*VPYYTLALIAVIII
Trigger: GATGATGATGACAGCAATGAGAGCAAGAGTATAGTATGGTACCCACCTTGGGCTCGGATTGGGACTGAAGCTGGAACCAGAGCTAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000491568.6
ENST00000537169.1
CDS GCA 90 bp TCCTCAAGACAAGCAGTTCGCCCCTTCTTCTTTTCCCTAGTGGTGTaGCACTCCCAACAATCTTTCCAATCCTCAAATCGACCTCCACCG +
Preference number: 5 (lower is better)
Translates to: SSRQAVRPFFFSLVV*HSQQSFQSSNRPPP
Trigger: CGGTGGAGGTCGATTTGAGGATTGGAAAGATTGTTGGGAGTGGCACACCACTAGGGAAAAGAAGAAGGGGCGAACTGCTTGTCTTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479298.5
CDS-3UTR CAA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCCCACCCGGGAGAGGCTaGGACCCACGTTTCGCAGCA +
Preference number: 5 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFPPGRG*DPRFAA
Trigger: TGCTGCGAAACGTGGGTCCAAGCCTCTCCCGGGTGG...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537169.1
CDS-3UTR CAA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCTTCTTTTGCCTGGCGTaGTGCCGCAACCTACAGAAA +
Preference number: 5 (lower is better)
Translates to: PPLGCERLHFATPSLTLLFFCLA*CRNLQK
Trigger: TTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAA...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTTTCCTTCCTCTTCTTTaGCCTGGCGTTGTGCCGCAA +
Preference number: 5 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLIFLPLL*PGVVPQ
Trigger: TTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAA...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCGAATCTTTGCGACAATaGGGAGACCACCCAGATCAC +
Preference number: 5 (lower is better)
Translates to: PPLGCERLHFATPSLTLLESLRQ*GDHPDH
Trigger: GTGATCTGGGTGGTCTCCCAATTGTCGCAAAGATTC...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS GCA 90 bp TCCTCAAGACAAGCAGTTCGCCCCTTCTTCTTTTCCCTAGTGGTGTaGCACTCCCAACAATCTTTCCAATCTCTACTGATCGGAGGAAAC +
Preference number: 5 (lower is better)
Translates to: SSRQAVRPFFFSLVV*HSQQSFQSLLIGGN
Trigger: GTTTCCTCCGATCAGTAGAGATTGGAAAGATTGTTGGGAGTGGCACACCACTAGGGAAAAGAAGAAGGGGCGAACTGCTTGTCTTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341189.8
ENST00000467808.5
ENST00000471229.7
ENST00000491568.6
ENST00000537169.1
CDS GCA 90 bp CAATCCGAGCCCAAGGTGGGTACCATACTATACTCTTGCTCTCATTaGTGTCATCATCATCATCAGACCAGTCATTATACCTGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: QSEPKVGTILYSCSH*CHHHHQTSHYTWPQ
Trigger: CTGGGGCCAGGTATAATGACTGGTCTGATGATGATGATGACAGCAATGAGAGCAAGAGTATAGTATGGTACCCACCTTGGGCTCGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000491568.6
ENST00000537169.1
CDS-3UTR CAA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCGTTATTCCTGGCTCTTaGGGAACATATGTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLVIPGS*GTYVQQ
Trigger: TTGCTGAACATATGTTCCCAAAGAGCCAGGAATAAC...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp CCCCCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATATGTTCAGCAAGTTaGGCCATGAATTTTCCAACT +
Preference number: 5 (lower is better)
Translates to: PPCLVSWNSLTTLPHSGLICSAS*AMNFPT
Trigger: AGTTGGAAAATTCATGGCCAAACTTGCTGAACATAT...GAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACAGCGGGACATATGTCTaGGAAAGCGGGCGGCGAGTG +
Preference number: 5 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYSGTYV*ESGRRV
Trigger: CACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCT...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537169.1
CDS-3UTR CAA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCTACCATACTATACTCTaGCTCTCATTGCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: PPLGCERLHFATPSLTLLYHTIL*LSLLSS
Trigger: TGATGACAGCAATGAGAGCAAGAGTATAGTATGGTA...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCACGGTATCATCTGAATaGGGGGAAGCCCGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: RELTHDELVHCHLCRRNSTVSSE*GEARFW
Trigger: CCAGAAACGGGCTTCCCCCAATTCAGATGATACCGT...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCCTTACTCATGATGAATaGGTTCACTGTCACTTATGC +
Preference number: 5 (lower is better)
Translates to: PPLGCERLHFATPSLTLLLTHDE*VHCHLC
Trigger: GCATAAGTGACAGTGAACCAATTCATCATGAGTAAG...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp CCTTGTCTTGTCTCATGGAATTCCCTAACCACCCTACCCCATTCAGGACTCATTTTTGCCACACCCTCATaGACACTACTCAGTAATAGA +
Preference number: 5 (lower is better)
Translates to: PCLVSWNSLTTLPHSGLIFATPS*TLLSNR
Trigger: TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAA...AATGAGTCCTGAATGGGGTAGGGTGGTTAGGGAATTCCATGAGACAAGACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCTTCTTTTGCCTGGCGTaGTGCCGCAACCTACAGAAA +
Preference number: 5 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFFFCLA*CRNLQK
Trigger: TTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAA...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp CCACCACTAGGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCCTGTGTGAACATTCCTaGCTTTATAACCAATCCAAT +
Preference number: 5 (lower is better)
Translates to: PPLGCERLHFATPSLTLLLCEHS*LYNQSN
Trigger: ATTGGATTGGTTATAAAGCAAGGAATGTTCACACAG...GAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACACGGTATCATCTGAATaGGGGGAAGCCCGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYTVSSE*GEARFW
Trigger: CCAGAAACGGGCTTCCCCCAATTCAGATGATACCGT...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGATTTGCCACACCCTCATaGACACTACTCAGTAATAGA +
Preference number: 5 (lower is better)
Translates to: GCERLHFATPSLTLLSNRFATPS*TLLSNR
Trigger: TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAA...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATTCCTTCCTCTTCTTTaGCCTGGCGTTGTGCCGCAA +
Preference number: 5 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPFLPLL*PGVVPQ
Trigger: TTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAA...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAACGGTATCATCTGAATaGGGGGAAGCCCGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPTVSSE*GEARFW
Trigger: CCAGAAACGGGCTTCCCCCAATTCAGATGATACCGT...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCAGAATCTTTGCGACAATaGGGAGACCACCCAGATCAC +
Preference number: 5 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPESLRQ*GDHPDH
Trigger: GTGATCTGGGTGGTCTCCCAATTGTCGCAAAGATTC...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCATGGGATCCCGAGTATaGAGAATCTTTGCGACAATT +
Preference number: 5 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFMGSRV*RIFATI
Trigger: AATTGTCGCAAAGATTCTCAATACTCGGGATCCCAT...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCGTTATTCCTGGCTCTTaGGGAACATATGTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: RELTHDELVHCHLCRRNSVIPGS*GTYVQQ
Trigger: TTGCTGAACATATGTTCCCAAAGAGCCAGGAATAAC...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp GGATGTGAAAGGCTCCATTTTGCCACACCCTCATTGACACTACTCAGTAATAGATTTCCAATCAATCACTaGCTTCATTCCCAACACTTT +
Preference number: 5 (lower is better)
Translates to: GCERLHFATPSLTLLSNRFPINH*LHSQHF
Trigger: AAAGTGTTGGGAATGAAGCAAGTGATTGATTGGAAA...TCTATTACTGAGTAGTGTCAATGAGGGTGTGGCAAAATGGAGCCTTTCACATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAATGGGATCCCGAGTATaGAGAATCTTTGCGACAATT +
Preference number: 5 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYAMGSRV*RIFATI
Trigger: AATTGTCGCAAAGATTCTCAATACTCGGGATCCCAT...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCATACCATACTATACTCTaGCTCTCATTGCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYAYHTIL*LSLLSS
Trigger: TGATGACAGCAATGAGAGCAAGAGTATAGTATGGTA...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACATGGGATCCCGAGTATaGAGAATCTTTGCGACAATT +
Preference number: 5 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYMGSRV*RIFATI
Trigger: AATTGTCGCAAAGATTCTCAATACTCGGGATCCCAT...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCATATGTTCAGCAAGTTaGGCCATGAATTTTCCAACT +
Preference number: 5 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFICSAS*AMNFPT
Trigger: AGTTGGAAAATTCATGGCCAAACTTGCTGAACATAT...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACGTTATTCCTGGCTCTTaGGGAACATATGTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYVIPGS*GTYVQQ
Trigger: TTGCTGAACATATGTTCCCAAAGAGCCAGGAATAAC...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCACTTACTCATGATGAATaGGTTCACTGTCACTTATGC +
Preference number: 5 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYALTHDE*VHCHLC
Trigger: GCATAAGTGACAGTGAACCAATTCATCATGAGTAAG...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCCTGTTATCTTTTGGTTaGTACGTTTCTTATCTCTCC +
Preference number: 5 (lower is better)
Translates to: RELTHDELVHCHLCRRNSLLSFG*YVSYLS
Trigger: GGAGAGATAAGAAACGTACAAACCAAAAGATAACAG...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TTAGACAGTGCTGGGATGAACAGCCTCATACATACAATCTTTGGGCAATTATTCTTTCCAATCAATCACTaGCTTCATTCCCAACACTTT +
Preference number: 5 (lower is better)
Translates to: LDSAGMNSLIHTIFGQLFFPINH*LHSQHF
Trigger: AAAGTGTTGGGAATGAAGCAAGTGATTGATTGGAAA...GAATAATTGCCCAAAGATTGTATGTATGAGGCTGTTCATCCCAGCACTGTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp AGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCAGAAGAAATAGCTTTCCAATCAATCACTaGCTTCATTCCCAACACTTT +
Preference number: 5 (lower is better)
Translates to: RELTHDELVHCHLCRRNSFPINH*LHSQHF
Trigger: AAAGTGTTGGGAATGAAGCAAGTGATTGATTGGAAA...GCTATTTCTTCTGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp AAAATGACAGAAGGGAGCTTACTCATGATGAATTGGTTCACTGTCACTTATGCACTGTGTGAACATTCCTaGCTTTATAACCAATCCAAT +
Preference number: 5 (lower is better)
Translates to: KMTEGSLLMMNWFTVTYALCEHS*LYNQSN
Trigger: ATTGGATTGGTTATAAAGCAAGGAATGTTCACACAG...TGCATAAGTGACAGTGAACCAATTCATCATGAGTAAGCTCCCTTCTGTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS CCA 90 bp GTGTTGCTTCTAAATTACAAAATCAAGGTGTTATTCCTGGCTCTTTaGGAACATATGTTCAGCAAGTTTGGCCATGAATTTTCCAACTTT +
Preference number: 5 (lower is better)
Translates to: VLLLNYKIKVLFLAL*EHMFSKFGHEFSNF
Trigger: AAAGTTGGAAAATTCATGGCCAAACTTGCTGAACATATGTTCCCAAAGAGCCAGGAATAACACCTTGATTTTGTAATTTAGAAGCAACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACATATGTTCAGCAAGTTaGGCCATGAATTTTCCAACT +
Preference number: 5 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYICSAS*AMNFPT
Trigger: AGTTGGAAAATTCATGGCCAAACTTGCTGAACATAT...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCATCAGCATACCTGTTATCTTTTGGTTaGTACGTTTCTTATCTCTCC +
Preference number: 5 (lower is better)
Translates to: SQRIMNSFSWQYRFPSAYLLSFG*YVSYLS
Trigger: GGAGAGATAAGAAACGTACAAACCAAAAGATAACAG...GTATGCTGATGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS-3UTR CAA 90 bp TTTCTGACTTCACAACGCATAATGAATAGCTTTTCCTGGCAATATAGATTTCCACTGTGTGAACATTCCTaGCTTTATAACCAATCCAAT +
Preference number: 5 (lower is better)
Translates to: FLTSQRIMNSFSWQYRFPLCEHS*LYNQSN
Trigger: ATTGGATTGGTTATAAAGCAAGGAATGTTCACACAG...TGGAAATCTATATTGCCAGGAAAAGCTATTCATTATGCGTTGTGAAGTCAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS CCA 72 bp CAAGCGGGACATATGTCTTGGAAAGCGGGCGGCGAGTaGGAGAGACGACGGAGGCGCCTCAGTACCCGCGAC +
Preference number: 6 (lower is better)
Translates to: QAGHMSWKAGGE*ERRRRRLSTRD
Trigger: GTCGCGGGTACTGAGGCGCCTCCGTCGTCTCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467808.5
ENST00000477980.6
ENST00000491568.6
CDS CCA 72 bp CCCATATCCAGCCATTCCCCTCCGGCACTGTCCTGGTaGACTAGGGGCCAACACCCAGGCCACAGCTCCCTT +
Preference number: 6 (lower is better)
Translates to: PISSHSPPALSW*TRGQHPGHSSL
Trigger: AAGGGAGCTGTGGCCTGGGTGTTGGCCCCTAGTCCACCAGGACAGTGCCGGAGGGGAATGGCTGGATATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477980.6
CDS CAA 90 bp CACCGTTTCGCAGCATCGAAATGGGCTGCAAGCGGGACATATGTCTaGGAAAGCGGGCGGCGAGTGGGAGAGACGACGGAGGCGCCTCAG +
Preference number: 6 (lower is better)
Translates to: HRFAASKWAASGTYV*ESGRRVGETTEAPQ
Trigger: CTGAGGCGCCTCCGTCGTCTCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477980.6
CDS CAA 90 bp CCACGTTTCGCAGCATCGAAATGGGCTGCAAGCGGGACATATGTCTaGGAAAGCGGGCGGCGAGTGGGAGAGACGACGGAGGCGCCTCAG +
Preference number: 6 (lower is better)
Translates to: PRFAASKWAASGTYV*ESGRRVGETTEAPQ
Trigger: CTGAGGCGCCTCCGTCGTCTCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491568.6
CDS GCA 72 bp CCCCGCAGCTCACCGTTTCGCAGCATCGAAATGGGCTaGAAGCGGGACATATGTCTTGGAAAGCGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: PRSSPFRSIEMG*KRDICLGKRAA
Trigger: CGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGGTGAGCTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477980.6
CDS CAA 90 bp AGACGTTTCGCAGCATCGAAATGGGCTGCAAGCGGGACATATGTCTaGGAAAGCGGGCGGCGAGTGGGAGAGACGACGGAGGCGCCTCAG +
Preference number: 6 (lower is better)
Translates to: RRFAASKWAASGTYV*ESGRRVGETTEAPQ
Trigger: CTGAGGCGCCTCCGTCGTCTCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467808.5
CDS CCA 72 bp TTTTGCCTGGCGTTGTGCCGCAACCTACAGAAAGACTaGCCACCCGGGAGAGGCTTGGACCCACTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: FCLALCRNLQKD*PPGRGLDPLQG
Trigger: TCCCTGCAGTGGGTCCAAGCCTCTCCCGGGTGGCCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341189.8
CDS CCA 72 bp CAGCATCGAAATGGGCTGCAAGCGGGACATATGTCTTaGAAAGCGGGCGGCGAGTGGGAGAGACGACGGAGG +
Preference number: 6 (lower is better)
Translates to: QHRNGLQAGHMS*KAGGEWERRRR
Trigger: CCTCCGTCGTCTCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467808.5
ENST00000477980.6
ENST00000491568.6
CDS CAA 72 bp GCAGCATCGAAATGGGCTGCAAGCGGGACATATGTCTaGGAAAGCGGGCGGCGAGTGGGAGAGACGACGGAG +
Preference number: 6 (lower is better)
Translates to: AASKWAASGTYV*ESGRRVGETTE
Trigger: CTCCGTCGTCTCTCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467808.5
ENST00000477980.6
ENST00000491568.6
CDS TCA 72 bp ACAGCCACAGGCAGAAAGACGGGAAACTGCCGCCACTaGGCGCTTGGTGGACGGACTAGTCCCCAGAACACA +
Preference number: 6 (lower is better)
Translates to: TATGRKTGNCRH*ALGGRTSPQNT
Trigger: TGTGTTCTGGGGACTAGTCCGTCCACCAAGCGCTCAGTGGCGGCAGTTTCCCGTCTTTCTGCCTGTGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477980.6
CDS GCA 72 bp AGGCTTGGACCCACGTTTCGCAGCATCGAAATGGGCTaGAAGCGGGACATATGTCTTGGAAAGCGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RLGPTFRSIEMG*KRDICLGKRAA
Trigger: CGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGTGGGTCCAAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491568.6
ENST00000537169.1
CDS CCA 72 bp AAAACGGTATCATCTGAATTGGGGGAAGCCCGTTTCTaGACAGCCCGACGTGCCCGGGTAGCCCTGGCCCTT +
Preference number: 6 (lower is better)
Translates to: KTVSSELGEARF*TARRARVALAL
Trigger: AAGGGCCAGGGCTACCCGGGCACGTCGGGCTGTCCAGAAACGGGCTTCCCCCAATTCAGATGATACCGTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS CCA 72 bp GGTCTCGGCCCTACGCCCTCAAGCACCCCGACTTTATaGAATCTTCCAGGTACTGACCTGCAGGGATTCGGG +
Preference number: 6 (lower is better)
Translates to: GLGPTPSSTPTL*NLPGTDLQGFG
Trigger: CCCGAATCCCTGCAGGTCAGTACCTGGAAGATTCCATAAAGTCGGGGTGCTTGAGGGCGTAGGGCCGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467808.5
ENST00000477980.6
ENST00000491568.6
CDS CCA 72 bp TTTTGCCTGGCGTTGTGCCGCAACCTACAGAAAGACTaGCCACCCGGGAGAGGCTTGGACCCACGTTTCGCA +
Preference number: 6 (lower is better)
Translates to: FCLALCRNLQKD*PPGRGLDPRFA
Trigger: TGCGAAACGTGGGTCCAAGCCTCTCCCGGGTGGCCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491568.6
ENST00000537169.1
CDS CCA 72 bp GGGAGAGGCTTGGACCCACGTTTCGCAGCATCGAAATaGGCTGCAAGCGGGACATATGTCTTGGAAAGCGGG +
Preference number: 6 (lower is better)
Translates to: GRGLDPRFAASK*AASGTYVLESG
Trigger: CCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGTGGGTCCAAGCCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491568.6
ENST00000537169.1
CDS CCA 72 bp AAACACCCCGCAGCTCACCGTTTCGCAGCATCGAAATaGGCTGCAAGCGGGACATATGTCTTGGAAAGCGGG +
Preference number: 6 (lower is better)
Translates to: KHPAAHRFAASK*AASGTYVLESG
Trigger: CCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGGTGAGCTGCGGGGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477980.6
CDS CAA 72 bp CAGGCAGAAAGACGGGAAACTGCCGCCACTGAGCGCTaGGTGGACGGACTAGTCCCCAGAACACAAAACTCT +
Preference number: 6 (lower is better)
Translates to: QAERRETAATER*VDGLVPRTQNS
Trigger: AGAGTTTTGTGTTCTGGGGACTAGTCCGTCCACCAAGCGCTCAGTGGCGGCAGTTTCCCGTCTTTCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477980.6
CDS GCA 72 bp ACCTACAGAAAGACGTTTCGCAGCATCGAAATGGGCTaGAAGCGGGACATATGTCTTGGAAAGCGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: TYRKTFRSIEMG*KRDICLGKRAA
Trigger: CGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGTCTTTCTGTAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467808.5
CDS CCA 72 bp CCGCAACCTACAGAAAGACGTTTCGCAGCATCGAAATaGGCTGCAAGCGGGACATATGTCTTGGAAAGCGGG +
Preference number: 6 (lower is better)
Translates to: PQPTERRFAASK*AASGTYVLESG
Trigger: CCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATTTCGATGCTGCGAAACGTCTTTCTGTAGGTTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467808.5
CDS CAA 90 bp CTCCACCGATTAGGATTAAATTCCTTCCTCTTCTTTTGCCTGGCGTaGTGCCGCAACCTACAGAAAGACTGGCCACCCGGGAGAGGCTTG +
Preference number: 6 (lower is better)
Translates to: LHRLGLNSFLFFCLA*CRNLQKDWPPGRGL
Trigger: CAAGCCTCTCCCGGGTGGCCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCCTAATCGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341189.8
ENST00000477980.6
ENST00000491568.6
ENST00000537169.1
CDS GCA 72 bp GGATTAAATTCCTTCCTCTTCTTTTGCCTGGCGTTGTaGCGCAACCTACAGAAAGACTGGCCACCCGGGAGA +
Preference number: 6 (lower is better)
Translates to: GLNSFLFFCLAL*RNLQKDWPPGR
Trigger: TCTCCCGGGTGGCCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341189.8
ENST00000477980.6
ENST00000491568.6
ENST00000537169.1
CDS CAA 90 bp TCAAATCGACCTCCACCGATTAGGATTAAATTCCTTCCTCTTCTTTaGCCTGGCGTTGTGCCGCAACCTACAGAAAGACTGGCCACCCGG +
Preference number: 6 (lower is better)
Translates to: SNRPPPIRIKFLPLL*PGVVPQPTERLATR
Trigger: CCGGGTGGCCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCCTAATCGGTGGAGGTCGATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341189.8
ENST00000477980.6
ENST00000491568.6
ENST00000537169.1
CDS GCA 72 bp GCACCCCGACTTTATGGAATCTTCCAGGTACTGACCTaGAGGGATTCGGGACAATTTCCTTCTCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: APRLYGIFQVLT*RDSGQFPSPLP
Trigger: AGGAAGAGGAGAAGGAAATTGTCCCGAATCCCTGCAGGTCAGTACCTGGAAGATTCCATAAAGTCGGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477980.6
ENST00000491568.6
CDS CCA 72 bp TGCTGTCATCATCATCATCAGACCAGTCATTATACCTaGCCCCAGAACAGTCCCCAGCATCATCCACATCCC +
Preference number: 6 (lower is better)
Translates to: CCHHHHQTSHYT*PQNSPQHHPHP
Trigger: GGGATGTGGATGATGCTGGGGACTGTTCTGGGGCCAGGTATAATGACTGGTCTGATGATGATGATGACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000491568.6
ENST00000537169.1
CDS CCA 72 bp TCTGGTTCCAGCTTCAGTCCCAATCCGAGCCCAAGGTaGGTACCATACTATACTCTTGCTCTCATTGCTGTC +
Preference number: 6 (lower is better)
Translates to: SGSSFSPNPSPR*VPYYTLALIAV
Trigger: GACAGCAATGAGAGCAAGAGTATAGTATGGTACCCACCTTGGGCTCGGATTGGGACTGAAGCTGGAACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000491568.6
ENST00000537169.1
CDS CAA 72 bp TTAGGATTAAATTCCTTCCTCTTCTTTTGCCTGGCGTaGTGCCGCAACCTACAGAAAGACTGGCCACCCGGG +
Preference number: 6 (lower is better)
Translates to: LGLNSFLFFCLA*CRNLQKDWPPG
Trigger: CCCGGGTGGCCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341189.8
ENST00000477980.6
ENST00000491568.6
ENST00000537169.1
CDS GCA 72 bp GGATTAAATTCCTTCCTCTTCTTTTGCCTGGCGTTGTaGCGCAACCTACAGAAAGACTGCAGGGATTCGGGA +
Preference number: 6 (lower is better)
Translates to: GLNSFLFFCLAL*RNLQKDCRDSG
Trigger: TCCCGAATCCCTGCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471229.7
ENST00000479298.5
CDS CAA 90 bp CTCCACCGATTAGGATTAAATTCCTTCCTCTTCTTTTGCCTGGCGTaGTGCCGCAACCTACAGAAAGACGTTTCGCAGCATCGAAATGGG +
Preference number: 6 (lower is better)
Translates to: LHRLGLNSFLFFCLA*CRNLQKDVSQHRNG
Trigger: CCCATTTCGATGCTGCGAAACGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCCTAATCGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467808.5
CDS GCA 72 bp CAAGCAGTTCGCCCCTTCTTCTTTTCCCTAGTGGTGTaGCACTCCCAACAATCTTTCCAATCTCTACTGATC +
Preference number: 6 (lower is better)
Translates to: QAVRPFFFSLVV*HSQQSFQSLLI
Trigger: GATCAGTAGAGATTGGAAAGATTGTTGGGAGTGGCACACCACTAGGGAAAAGAAGAAGGGGCGAACTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341189.8
ENST00000467808.5
ENST00000471229.7
ENST00000491568.6
ENST00000537169.1
CDS GCA 72 bp GGATTAAATTCCTTCCTCTTCTTTTGCCTGGCGTTGTaGCGCAACCTACAGAAAGACGTTTCGCAGCATCGA +
Preference number: 6 (lower is better)
Translates to: GLNSFLFFCLAL*RNLQKDVSQHR
Trigger: TCGATGCTGCGAAACGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467808.5
CDS GCA 72 bp CAAGCAGTTCGCCCCTTCTTCTTTTCCCTAGTGGTGTaGCACTCCCAACAATCTTTCCAATCCTCAAATCGA +
Preference number: 6 (lower is better)
Translates to: QAVRPFFFSLVV*HSQQSFQSSNR
Trigger: TCGATTTGAGGATTGGAAAGATTGTTGGGAGTGGCACACCACTAGGGAAAAGAAGAAGGGGCGAACTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479298.5
CDS CAA 90 bp TCAAATCGACCTCCACCGATTAGGATTAAATTCCTTCCTCTTCTTTaGCCTGGCGTTGTGCCGCAACCTACAGAAAGACGTTTCGCAGCA +
Preference number: 6 (lower is better)
Translates to: SNRPPPIRIKFLPLL*PGVVPQPTERRFAA
Trigger: TGCTGCGAAACGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCCTAATCGGTGGAGGTCGATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467808.5
CDS CAA 90 bp CTCCACCGATTAGGATTAAATTCCTTCCTCTTCTTTTGCCTGGCGTaGTGCCGCAACCTACAGAAAGACTGCAGGGATTCGGGACAATTT +
Preference number: 6 (lower is better)
Translates to: LHRLGLNSFLFFCLA*CRNLQKDCRDSGQF
Trigger: AAATTGTCCCGAATCCCTGCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCCTAATCGGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471229.7
ENST00000479298.5
CDS CAA 90 bp TCAAATCGACCTCCACCGATTAGGATTAAATTCCTTCCTCTTCTTTaGCCTGGCGTTGTGCCGCAACCTACAGAAAGACTGCAGGGATTC +
Preference number: 6 (lower is better)
Translates to: SNRPPPIRIKFLPLL*PGVVPQPTERLQGF
Trigger: GAATCCCTGCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCCTAATCGGTGGAGGTCGATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471229.7
ENST00000479298.5
CDS CAA 72 bp TTAGGATTAAATTCCTTCCTCTTCTTTTGCCTGGCGTaGTGCCGCAACCTACAGAAAGACTGCAGGGATTCG +
Preference number: 6 (lower is better)
Translates to: LGLNSFLFFCLA*CRNLQKDCRDS
Trigger: CGAATCCCTGCAGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471229.7
ENST00000479298.5
CDS CAA 72 bp TTAGGATTAAATTCCTTCCTCTTCTTTTGCCTGGCGTaGTGCCGCAACCTACAGAAAGACGTTTCGCAGCAT +
Preference number: 6 (lower is better)
Translates to: LGLNSFLFFCLA*CRNLQKDVSQH
Trigger: ATGCTGCGAAACGTCTTTCTGTAGGTTGCGGCACAACGCCAGGCAAAAGAAGAGGAAGGAATTTAATCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467808.5
CDS GCA 72 bp CCCAAGGTGGGTACCATACTATACTCTTGCTCTCATTaGTGTCATCATCATCATCAGACCAGTCATTATACC +
Preference number: 6 (lower is better)
Translates to: PKVGTILYSCSH*CHHHHQTSHYT
Trigger: GGTATAATGACTGGTCTGATGATGATGATGACAGCAATGAGAGCAAGAGTATAGTATGGTACCCACCTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000491568.6
ENST00000537169.1
CDS CAA 72 bp ATTAAAGCCTTTTCCTTAACTATGGGATCCCGAGTATaGAGAATCTTTGCGACAATTGGGAGACCACCCAGA +
Preference number: 6 (lower is better)
Translates to: IKAFSLTMGSRV*RIFATIGRPPR
Trigger: TCTGGGTGGTCTCCCAATTGTCGCAAAGATTCTCAATACTCGGGATCCCATAGTTAAGGAAAAGGCTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1
CDS CCA 72 bp CTAAATTACAAAATCAAGGTGTTATTCCTGGCTCTTTaGGAACATATGTTCAGCAAGTTTGGCCATGAATTT +
Preference number: 6 (lower is better)
Translates to: LNYKIKVLFLAL*EHMFSKFGHEF
Trigger: AAATTCATGGCCAAACTTGCTGAACATATGTTCCCAAAGAGCCAGGAATAACACCTTGATTTTGTAATTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341189.8
ENST00000471229.7
ENST00000537169.1