RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARMC6 (Homo sapiens)

Ensembl gene IDs: ENSG00000105676

Ensembl transcript IDs: ENST00000269932.10, ENST00000392335.6, ENST00000392336.7, ENST00000535288.1, ENST00000535478.5, ENST00000535612.6, ENST00000535758.1, ENST00000535795.1, ENST00000536098.5, ENST00000537263.5, ENST00000538663.5, ENST00000539985.5, ENST00000540634.2, ENST00000540707.5, ENST00000540792.5, ENST00000541725.5, ENST00000541898.5, ENST00000543877.1, ENST00000545091.5, ENST00000546344.5

Found 1013 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCAGCAGGCGCCAGGGGGCCCAACCCCACTGGAATCGCCTGCCCTaGCCTGAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGC +
Preference number: 1 (lower is better)
Translates to: SSRRQGAQPHWNRLP*PEPGPQWLPHFRQG
Trigger: GCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAGGGCAGGGCAGGCGATTCCAGTGGGGTTGGGCCCCCTGGCGCCTGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
3UTR TCA 90 bp GCCAGGTTGCCCCTCTGGCCTGTCCACAGCTCTCGGAGCTCGACATaGCAACCCAGGTCCCGCAGGGCGGCCTTGGCCACGTCCTCACAG +
Preference number: 1 (lower is better)
Translates to: ARLPLWPVHSSRSST*QPRSRRAALATSSQ
Trigger: CTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535795.1
3UTR CCA 90 bp CACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGGTCATaGCGCCAGGTTGCCCCTCTGGCCTGTCCACAGCTCTCGGAGCTC +
Preference number: 1 (lower is better)
Translates to: HTTHPESRPRLGLGS*RQVAPLACPQLSEL
Trigger: GAGCTCCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535795.1
3UTR GCA 90 bp CCCAGAGTCACGGCCCAGACTGGGCCTGGGGTCATGGCGCCAGGTTaGCCCTCTGGCCTGTCCACAGCTCTCGGAGCTCGACATGACAAC +
Preference number: 1 (lower is better)
Translates to: PRVTAQTGPGVMAPG*PSGLSTALGARHDN
Trigger: GTTGTCATGTCGAGCTCCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535795.1
3UTR TCA 90 bp GAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGCAGTGAGTaGTGGGACGTGCCCTTTGCCCCCTCTGGTAGGGCGTGGGGCTGG +
Preference number: 1 (lower is better)
Translates to: EPGPQWLPHFRQGSE*WDVPFAPSGRAWGW
Trigger: CCAGCCCCACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
3UTR CCA 90 bp TCAGGCCCCCGAGGTCGACGACCTCCTGGCAGAACTCGTTGCGAATaGCCAGGCGGGACAGGGTTCCACAGAGCTCGCTCAGGATGCCAG +
Preference number: 1 (lower is better)
Translates to: SGPRGRRPPGRTRCE*PGGTGFHRARSGCQ
Trigger: CTGGCATCCTGAGCGAGCTCTGTGGAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCTCGGGGGCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR GCA 90 bp GAATGCTCAGGCCCCCGAGGTCGACGACCTCCTGGCAGAACTCGTTaGGAATGGCCAGGCGGGACAGGGTTCCACAGAGCTCGCTCAGGA +
Preference number: 1 (lower is better)
Translates to: ECSGPRGRRPPGRTR*EWPGGTGFHRARSG
Trigger: TCCTGAGCGAGCTCTGTGGAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCTCGGGGGCCTGAGCATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR CCA 90 bp AGCAGGGACACCAGAATGCTCAGGCCCCCGAGGTCGACGACCTCCTaGCAGAACTCGTTGCGAATGGCCAGGCGGGACAGGGTTCCACAG +
Preference number: 1 (lower is better)
Translates to: SRDTRMLRPPRSTTS*QNSLRMARRDRVPQ
Trigger: CTGTGGAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCTCGGGGGCCTGAGCATTCTGGTGTCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR TCA 90 bp GGCCTTGTCCTGTTTGCACTGGTCGCAGAAGCGGGTGAGGTATGCTaGCACCTCCTGGGGGCGAGAGCTGGCCACAGACTCCTGGAGGTC +
Preference number: 1 (lower is better)
Translates to: GLVLFALVAEAGEVC*HLLGARAGHRLLEV
Trigger: GACCTCCAGGAGTCTGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR CCA 90 bp ACACAGCGGATCCCAGAGCAGGTCAGGTCAGCCTCATCAGCATTCTaGGTCAGCGTGGCCACTAGGAGCTGCAGGCCCTGGGCATCCAGG +
Preference number: 1 (lower is better)
Translates to: TQRIPEQVRSASSAF*VSVATRSCRPWASR
Trigger: CCTGGATGCCCAGGGCCTGCAGCTCCTAGTGGCCACGCTGACCCAGAATGCTGATGAGGCTGACCTGACCTGCTCTGGGATCCGCTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
3UTR GCA 90 bp CCCTCATCTGGTGGTCATTGCAGTCGGCTAGCAGGGACACCAGAATaGTCAGGCCCCCGAGGTCGACGACCTCCTGGCAGAACTCGTTGC +
Preference number: 1 (lower is better)
Translates to: PSSGGHCSRLAGTPE*SGPRGRRPPGRTRC
Trigger: GCAACGAGTTCTGCCAGGAGGTCGTCGACCTCGGGGGCCTGAGCATTCTGGTGTCCCTGCTAGCCGACTGCAATGACCACCAGATGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR CCA 90 bp TCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCTaGTCACCTGCAGTGGCCAGCTTCCAGGCAGTGAAGATGATGGGG +
Preference number: 1 (lower is better)
Translates to: SVSTDRALRDWSRRP*SPAVASFQAVKMMG
Trigger: CCCCATCATCTTCACTGCCTGGAAGCTGGCCACTGCAGGTGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
3UTR TCA 90 bp GCACATGAGGTGATGAGATGGGGGTCTCTCCTGGAGAAGGCAACGTaGGCTGAAACCTCATGTGCTAGGAGGAGCCGGCCACGGGGAAGG +
Preference number: 1 (lower is better)
Translates to: AHEVMRWGSLLEKAT*AETSCARRSRPRGR
Trigger: CCTTCCCCGTGGCCGGCTCCTCCTAGCACATGAGGTTTCAGCTCACGTTGCCTTCTCCAGGAGAGACCCCCATCTCATCACCTCATGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR CCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTaGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCT +
Preference number: 1 (lower is better)
Translates to: RSRTVTSVLLAGTQK*LGHGGCFLLCRGLP
Trigger: AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR TCA 90 bp AGAACTAATGGGGGACAGTGGAGGACATGGATCTACCCCCATTCCTaGGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: RTNGGQWRTWIYPHS*VTRLTQSHGPDWAW
Trigger: CCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATGTCCTCCACTGTCCCCCATTAGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR GCA 90 bp CTCCTCTGGCCCCATCGCAAACTCCTCGATGTTCTCGCGCACAGCTaGATCAAAGGTCTCCTGGGCAATGCGCTTGGAGACCATCTTCGC +
Preference number: 1 (lower is better)
Translates to: LLWPHRKLLDVLAHS*IKGLLGNALGDHLR
Trigger: GCGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAACATCGAGGAGTTTGCGATGGGGCCAGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR CCA 90 bp CCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCCTCCTCTaGCCCCATCGCAAACTCCTCGATGTTCTCGCGCACAGCTGCATC +
Preference number: 1 (lower is better)
Translates to: PLRFKLLHGLFHCLL*PHRKLLDVLAHSCI
Trigger: GATGCAGCTGTGCGCGAGAACATCGAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR GCA 90 bp CCTCGATGTTCTCGCGCACAGCTGCATCAAAGGTCTCCTGGGCAATaGGCTTGGAGACCATCTTCGCCTGTGTTGATGTTGGCGTGCAGC +
Preference number: 1 (lower is better)
Translates to: PRCSRAQLHQRSPGQ*AWRPSSPVLMLACS
Trigger: GCTGCACGCCAACATCAACACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAACATCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR GCA 90 bp CAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTaGCTCCTCTGGCCCCATCGCAAACTCCTCGATGTTCTCGCGCAC +
Preference number: 1 (lower is better)
Translates to: QINPLRFKLLHGLFH*LLWPHRKLLDVLAH
Trigger: GTGCGCGAGAACATCGAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR CCA 90 bp AGGCAGAGGGCATGGCTTGTCACATGGGGGCTTGTGCAAAGGCCCTaGGGTGGGGGAATAGGGAGTGAGTACAGTGGAAAGACTGGGAAA +
Preference number: 1 (lower is better)
Translates to: RQRAWLVTWGLVQRP*GGGIGSEYSGKTGK
Trigger: TTTCCCAGTCTTTCCACTGTACTCACTCCCTATTCCCCCACCCCAGGGCCTTTGCACAAGCCCCCATGTGACAAGCCATGCCCTCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR TCA 90 bp AGCCGATGGTGGGGGCAAGACAAACAGGAGAGTTCACAAATGAGGTaGCCTCAGATGGGGCCCAGTGTCAGAGCCAGAGCACATGAGGTG +
Preference number: 1 (lower is better)
Translates to: SRWWGQDKQESSQMR*PQMGPSVRARAHEV
Trigger: CACCTCATGTGCTCTGGCTCTGACACTGGGCCCCATCTGAGGTCACCTCATTTGTGAACTCTCCTGTTTGTCTTGCCCCCACCATCGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR TCA 90 bp GCTTTCACCAGGTCTTGCCGATTCTGTTCATGTTTCAGGCAAGCGTaGCGCACACAGCGGATCCCAGAGCAGGTCAGGTCAGCCTCATCA +
Preference number: 1 (lower is better)
Translates to: AFTRSCRFCSCFRQA*RTQRIPEQVRSASS
Trigger: TGATGAGGCTGACCTGACCTGCTCTGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAAGACCTGGTGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
3UTR CCA 90 bp GCAAACTCCTCGATGTTCTCGCGCACAGCTGCATCAAAGGTCTCCTaGGCAATGCGCTTGGAGACCATCTTCGCCTGTGTTGATGTTGGC +
Preference number: 1 (lower is better)
Translates to: ANSSMFSRTAASKVS*AMRLETIFACVDVG
Trigger: GCCAACATCAACACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAACATCGAGGAGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR TCA 90 bp GGGGCCACCTGGCAGGGACCTCGAGTGCTTGTCAGTTTATTCAGGTaGACACTCAAAAACACTGACGGGAAGCTGAAGGCACAGCAAGTG +
Preference number: 1 (lower is better)
Translates to: GATWQGPRVLVSLFR*TLKNTDGKLKAQQV
Trigger: CACTTGCTGTGCCTTCAGCTTCCCGTCAGTGTTTTTGAGTGTTCACCTGAATAAACTGACAAGCACTCGAGGTCCCTGCCAGGTGGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR CCA 90 bp TCCTGGAGGTCACTGAGCATCTGCAGGATGTCATGTGTGGGCTCCTaGGATCCGTCTGCAGAGACTTTAGGTGCCGTCTTTACAATGTTG +
Preference number: 1 (lower is better)
Translates to: SWRSLSICRMSCVGS*DPSAETLGAVFTML
Trigger: CAACATTGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACACATGACATCCTGCAGATGCTCAGTGACCTCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR CCA 90 bp AAGCCTTTGTTCTCCTGCACAATCATCTTGGCATGGTTGTGGGCATaGCCAAAGGGCACACGGATGTCGTCATCGAAGGTCATGACACGC +
Preference number: 1 (lower is better)
Translates to: KPLFSCTIILAWLWA*PKGTRMSSSKVMTR
Trigger: GCGTGTCATGACCTTCGATGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR GCA 90 bp AACGCTTTGGTGGCTTCGATGAGCACCTTCAAGCCTTTGTTCTCCTaGACAATCATCTTGGCATGGTTGTGGGCATGGCCAAAGGGCACA +
Preference number: 1 (lower is better)
Translates to: NALVASMSTFKPLFS*TIILAWLWAWPKGT
Trigger: TGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAAGCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR CCA 90 bp ACCTTCAAGCCTTTGTTCTCCTGCACAATCATCTTGGCATGGTTGTaGGCATGGCCAAAGGGCACACGGATGTCGTCATCGAAGGTCATG +
Preference number: 1 (lower is better)
Translates to: TFKPLFSCTIILAWL*AWPKGTRMSSSKVM
Trigger: CATGACCTTCGATGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTTGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR CCA 90 bp ATGAGCACCTTCAAGCCTTTGTTCTCCTGCACAATCATCTTGGCATaGTTGTGGGCATGGCCAAAGGGCACACGGATGTCGTCATCGAAG +
Preference number: 1 (lower is better)
Translates to: MSTFKPLFSCTIILA*LWAWPKGTRMSSSK
Trigger: CTTCGATGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTTGAAGGTGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR GCA 90 bp ACTGAGCATCTGCAGGATGTCATGTGTGGGCTCCTGGGATCCGTCTaGAGAGACTTTAGGTGCCGTCTTTACAATGTTGCTCAGATCAAC +
Preference number: 1 (lower is better)
Translates to: TEHLQDVMCGLLGSV*RDFRCRLYNVAQIN
Trigger: GTTGATCTGAGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACACATGACATCCTGCAGATGCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR GCA 90 bp GATGTCATGTGTGGGCTCCTGGGATCCGTCTGCAGAGACTTTAGGTaGCGTCTTTACAATGTTGCTCAGATCAACCCCTTGCGATTCAAA +
Preference number: 1 (lower is better)
Translates to: DVMCGLLGSVCRDFR*RLYNVAQINPLRFK
Trigger: TTTGAATCGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACACATGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR-3UTR CCA 90 bp GGGGTAGGCCCCCTTCTGGGCCGCGAGGAAGCGGCAGGCCTTGTCCTGTTTGCACCTGGGGGCGAGAGCTaGCCACAGACTCCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: GVGPLLGREEAAGLVLFAPGGES*PQTPGG
Trigger: ACCTCCAGGAGTCTGTGGCCAGCTCTCGCCCCCAGG...TGCAAACAGGACAAGGCCTGCCGCTTCCTCGCGGCCCAGAAGGGGGCCTACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR-3UTR TCA 90 bp TCAGGCCCCCGAGGTCGACGACCTCCTGGCAGAACTCGTTGCGAATGGCCAGGCCCCAGCAGGCTTCCCTaGCCACGTCAGTGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: SGPRGRRPPGRTRCEWPGPSRLP*PRQCGG
Trigger: GCCACCACACTGACGTGGTCAGGGAAGCCTGCTGGG...GCCTGGCCATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCTCGGGGGCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR CAA 90 bp GGGACACCACGGAGAGGTGCAGCCAGGGTGACGCTCCTCAGCTGTTaGCATCGGCTGGATTCCACGGAAGCTGGGGGCCCAGAGTCACGG +
Preference number: 2 (lower is better)
Translates to: GTPRRGAARVTLLSC*HRLDSTEAGGPESR
Trigger: CCGTGACTCTGGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTGGCTGCACCTCTCCGTGGTGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR CAA 90 bp GGGACACCACGGAGAGGTGCAGCCAGGGTGACGCTCCTCAGCTGTTaGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCA +
Preference number: 2 (lower is better)
Translates to: GTPRRGAARVTLLSC*HRLDSTEAGGLPES
Trigger: TGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTGGCTGCACCTCTCCGTGGTGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
3UTR-3UTR GCA 90 bp AAGCGGGTGAGGTATGCTGACACCTCCTGGGGGCGAGAGCTGGCCACAGACTCCCACGGCCTCTTTCACTaGCTCCTCTGGCCCCATCGC +
Preference number: 2 (lower is better)
Translates to: KRVRYADTSWGRELATDSHGLFH*LLWPHR
Trigger: GCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTG...GGAGTCTGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR-3UTR CCA 90 bp AGGCACAGCAAGTGGGGACAGGGGCCTCCCTGCAGGGAGCCAGCCGATGGTGGGTGCAGCCTTGACTCCTaGGCTCAAGTGATCTTCCCG +
Preference number: 2 (lower is better)
Translates to: RHSKWGQGPPCREPADGGCSLDS*AQVIFP
Trigger: CGGGAAGATCACTTGAGCCCAGGAGTCAAGGCTGCA...CCCACCATCGGCTGGCTCCCTGCAGGGAGGCCCCTGTCCCCACTTGCTGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR-3UTR TCA 90 bp CGAGCTCCTGAACGCCGCTCTGGTCCCTCATCTGGTGGTCATTGCAGTCGGCTAGCGGGTGAGGTATGCTaGCACCTCCTGGGGGCGAGA +
Preference number: 2 (lower is better)
Translates to: RAPERRSGPSSGGHCSRLAGEVC*HLLGAR
Trigger: TCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGC...TAGCCGACTGCAATGACCACCAGATGAGGGACCAGAGCGGCGTTCAGGAGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR-3UTR CCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGAGCCAGGTTGCCCCTCTaGCCTGTCCACAGCTCTCGG +
Preference number: 2 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGARLPL*PVHSSR
Trigger: CCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGC...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535795.1
3UTR-3UTR TCA 90 bp CGGGACAGGGTTCCACAGAGCTCGCTCAGGATGCCAGGGTTATCCAGGAACGCTCGTCATCGAAGGTCATaGCACGCAGGGCCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: RDRVPQSSLRMPGLSRNARHRRS*HAGPSR
Trigger: CCTGCTGGGCCCTGCGTGTCATGACCTTCGATGACG...AGCGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCTGTGGAACCCTGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR-3UTR CCA 90 bp AGGGCAGTGAGTGATGGGACGTGCCCTTTGCCCCCTCTGGTAGGGCGTGGGGCTGAAGTGGCTGGGACATaGGGGCTGCTTTCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: RAVSDGTCPLPPLVGRGAEVAGT*GLLSSV
Trigger: CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTC...AGCCCCACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATCACTCACTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR CCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGTCCTCACAGTCACGGTaGGCAGATCGGGCCTGCATG +
Preference number: 2 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGSSQSR*ADRACM
Trigger: CATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGA...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535795.1
3UTR-3UTR TCA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCATCTACCCCCATTCCTaGGTCACACGACTCACCCAG +
Preference number: 2 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFIYPHS*VTRLTQ
Trigger: CTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGAT...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR GCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGGTGAGTGATGGGACGTaGCCTTTGCCCCCTCTGGTA +
Preference number: 2 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVVSDGT*PLPPLV
Trigger: TACCAGAGGGGGCAAAGGGCACGTCCCATCACTCAC...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR GCA 90 bp GTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCGAGAGCACCCTTTCCTaGTGGGGGCAGGGGAGACGG +
Preference number: 2 (lower is better)
Translates to: VRAVWGRFEIFLPHPGSLESTLS*WGQGRR
Trigger: CCGTCTCCCCTGCCCCCAGCAGGAAAGGGTGCTCTC...GAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR-3UTR GCA 90 bp CGAGCTCCTGAACGCCGCTCTGGTCCCTCATCTGGTGGTCATTGCAGTCGGCTACCTGGCAGAACTCGTTaGGAATGGCCAGGCGGGACA +
Preference number: 2 (lower is better)
Translates to: RAPERRSGPSSGGHCSRLPGRTR*EWPGGT
Trigger: TGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGG...TAGCCGACTGCAATGACCACCAGATGAGGGACCAGAGCGGCGTTCAGGAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR-3UTR TCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGATCTACCCCCATTCCTaGGTCACACGACTCACCCAG +
Preference number: 2 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLIYPHS*VTRLTQ
Trigger: CTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGAT...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR TCA 90 bp AAGACAAGGAGCAGAGGCCTGCATGAAACTGCAGTAAGCAGCAGGCGCCAGGGGAGACAGGGCAGTGAGTaGTGGGACGTGCCCTTTGCC +
Preference number: 2 (lower is better)
Translates to: KTRSRGLHETAVSSRRQGRQGSE*WDVPFA
Trigger: GGCAAAGGGCACGTCCCATCACTCACTGCCCTGTCT...CCCCTGGCGCCTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTCCTTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR TCA 90 bp GCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGACCAGCCCTGCTGAGCTaGGAGCACCCTTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: AVWGRFEIFLPHPGSLQGPALLS*EHPFLL
Trigger: CAGCAGGAAAGGGTGCTCTCAGCTCAGCAGGGCTGG...TCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR-3UTR GCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGCTGGGACATGGGGGCTaGTTTCTTCTGTGTAGAGGC +
Preference number: 2 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVLGHGG*FLLCRG
Trigger: GCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAG...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR GCA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGGGACATGGGGGCTaGTTTCTTCTGTGTAGAGGC +
Preference number: 2 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLLGHGG*FLLCRG
Trigger: GCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAG...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR GCA 90 bp AGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTGAGAGCACCCTTTCCTaGTGGGGGCAGGGGAGACGG +
Preference number: 2 (lower is better)
Translates to: SQGSLGQIRDLSPTSWESESTLS*WGQGRR
Trigger: CCGTCTCCCCTGCCCCCAGCAGGAAAGGGTGCTCTC...AGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR-3UTR GCA 90 bp GGGGTAGGCCCCCTTCTGGGCCGCGAGGAAGCGGCAGGCCTTGTCCTGTTTGCACCGTCTTTACAATGTTaGTCAGATCAACCCCTTGCG +
Preference number: 2 (lower is better)
Translates to: GVGPLLGREEAAGLVLFAPSLQC*SDQPLA
Trigger: CGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGG...TGCAAACAGGACAAGGCCTGCCGCTTCCTCGCGGCCCAGAAGGGGGCCTACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR-3UTR GCA 90 bp AAGCGGGTGAGGTATGCTGACACCTCCTGGGGGCGAGAGCTGGCCACAGACTCCAGGTCACTGAGCATCTaGAGGATGTCATGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: KRVRYADTSWGRELATDSRSLSI*RMSCVG
Trigger: GCCCACACATGACATCCTGCAGATGCTCAGTGACCT...GGAGTCTGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR-3UTR CCA 90 bp TCCATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCTGGTCCCTGGGCAATGCGCTTaGAGACCATCTTCGCCTGTG +
Preference number: 2 (lower is better)
Translates to: SISQHRQGIEGLEQKALVPGQCA*RPSSPV
Trigger: CACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGG...GACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR-3UTR CCA 90 bp CCATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCTGGTCACTGGCCACAGACTCCTaGAGGTCACTGAGCATCTGC +
Preference number: 2 (lower is better)
Translates to: PSVSTDRALRDWSRRPWSLATDS*RSLSIC
Trigger: GCAGATGCTCAGTGACCTCCAGGAGTCTGTGGCCAG...TGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR-3UTR TCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGAATCTACCCCCATTCCTaGGTCACACGACTCACCCAG +
Preference number: 2 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGIYPHS*VTRLTQ
Trigger: CTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGAT...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR TCA 90 bp CTGAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGCAGTGAGTGATGGGTTTCAGACAGGGCAGTaGGTGATGGGACGTGCCCTT +
Preference number: 2 (lower is better)
Translates to: LSLAHSGCHISDRAVSDGFQTGQ*VMGRAL
Trigger: AAGGGCACGTCCCATCACTCACTGCCCTGTCTGAAA...CCCATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR TCA 90 bp TCCCTGCAGGGAGCCAGCCGATGGTGGGGGCAAGACAAACAGGAGAGTTCACAAACTCCTGGGCTCAAGTaGTCTTCCCGCCTTAGCCCA +
Preference number: 2 (lower is better)
Translates to: SLQGASRWWGQDKQESSQTPGLK*SSRLSP
Trigger: TGGGCTAAGGCGGGAAGATCACTTGAGCCCAGGAGT...TTGTGAACTCTCCTGTTTGTCTTGCCCCCACCATCGGCTGGCTCCCTGCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR-3UTR GCA 90 bp TCCCTGCAGGGAGCCAGCCGATGGTGGGGGCAAGACAAACAGGAGAGTTCACAACGCTCCTCAGCTGTTTaGATCGGCTGGATTCCACGG +
Preference number: 2 (lower is better)
Translates to: SLQGASRWWGQDKQESSQRSSAV*IGWIPR
Trigger: CCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCG...TTGTGAACTCTCCTGTTTGTCTTGCCCCCACCATCGGCTGGCTCCCTGCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR-3UTR CCA 90 bp AAGACAAGGAGCAGAGGCCTGCATGAAACTGCAGTAAGCAGCAGGCGCCAGGGGGAGCCTGGCCCACAGTaGCTGCCACATTTCAGACAG +
Preference number: 2 (lower is better)
Translates to: KTRSRGLHETAVSSRRQGEPGPQ*LPHFRQ
Trigger: CTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTC...CCCCTGGCGCCTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTCCTTGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR CCA 90 bp CAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAATAGGGCGGGGTGACTaGGTCAGAGGTTTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: QGSLGQIRDLSPTSWESPIGRGD*VRGLGQ
Trigger: CTGGCCCAAACCTCTGACCCAGTCACCCCGCCCTAT...TGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR-3UTR CCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTCCCGCAGGGCGGCCTTaGCCACGTCCTCACAGTCAC +
Preference number: 2 (lower is better)
Translates to: GGASETHFTGKKDKEQRPPAGRP*PRPHSH
Trigger: GTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGG...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535795.1
3UTR-3UTR CCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCTGGGCCTGGGGTCATaGCGCCAGGTTGCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: AKQGGASETHFTGKKDKELGLGS*RQVAPL
Trigger: CAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAG...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535795.1
3UTR-3UTR CCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTAGTCACGGCCCAGACTaGGCCTGGGGTCATGGCGCC +
Preference number: 2 (lower is better)
Translates to: GGASETHFTGKKDKEQRPSHGPD*AWGHGA
Trigger: GGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACT...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535795.1
3UTR CAA 90 bp GATGGCACCAGTCAGCAGAGGCAGCACGCCAGCTTTCACCAGGTCTaGCCGATTCTGTTCATGTTTCAGGCAAGCGTGACGCACACAGCG +
Preference number: 2 (lower is better)
Translates to: DGTSQQRQHASFHQV*PILFMFQASVTHTA
Trigger: CGCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAAGACCTGGTGAAAGCTGGCGTGCTGCCTCTGCTGACTGGTGCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
3UTR-3UTR TCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTAATCTACCCCCATTCCTaGGTCACACGACTCACCCAG +
Preference number: 2 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLIYPHS*VTRLTQ
Trigger: CTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGAT...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR GCA 90 bp AGGGTTCCACAGAGCTCGCTCAGGATGCCAGGGTTATCCAGGAACGCTTTGGTGAGGCCTTGTCCTGTTTaGACTGGTCGCAGAAGCGGG +
Preference number: 2 (lower is better)
Translates to: RVPQSSLRMPGLSRNALVRPCPV*TGRRSG
Trigger: CCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCT...CACCAAAGCGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCTGTGGAACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR-3UTR CCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCACTAATGGGGGACAGTaGAGGACATGGATCTACCCC +
Preference number: 2 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPTNGGQ*RTWIYP
Trigger: GGGGTAGATCCATGTCCTCCACTGTCCCCCATTAGT...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR CCA 90 bp GGAAGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGACTAATGGGGGACAGTaGAGGACATGGATCTACCCC +
Preference number: 2 (lower is better)
Translates to: GRSRTVTSVLLAGTQKWLTNGGQ*RTWIYP
Trigger: GGGGTAGATCCATGTCCTCCACTGTCCCCCATTAGT...CAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR CCA 90 bp GTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCGCTGTTTGCATCGGCTaGATTCCACGGAAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: VRAVWGRFEIFLPHPGSLAVCIG*IPRKLG
Trigger: CCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGC...GAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR-3UTR CCA 90 bp AGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTATAGGGCGGGGTGACTaGGTCAGAGGTTTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: SQGSLGQIRDLSPTSWESIGRGD*VRGLGQ
Trigger: CTGGCCCAAACCTCTGACCCAGTCACCCCGCCCTAT...AGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR-3UTR CCA 90 bp CTGGCCACAGACTCCTGGAGGTCACTGAGCATCTGCAGGATGTCATGTGTGGGCGCATCAAAGGTCTCCTaGGCAATGCGCTTGGAGACC +
Preference number: 2 (lower is better)
Translates to: LATDSWRSLSICRMSCVGASKVS*AMRLET
Trigger: GGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGC...GCCCACACATGACATCCTGCAGATGCTCAGTGACCTCCAGGAGTCTGTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR-3UTR TCA 90 bp GAAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGAGGTGCAGCCAGGGTaGCGCTCCTCAGCTGTTTGC +
Preference number: 2 (lower is better)
Translates to: EVKSGQSGADSRSFSHILEVQPG*RSSAVC
Trigger: GCAAACAGCTGAGGAGCGTCACCCTGGCTGCACCTC...CAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR-3UTR TCA 90 bp AAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGTTGGGCCAGCCCTGCTaGGCTGAGAGCACCCTTTCC +
Preference number: 2 (lower is better)
Translates to: KLSQGSLGQIRDLSPTSWLGQPC*AESTLS
Trigger: GGAAAGGGTGCTCTCAGCTCAGCAGGGCTGGCCCAA...CCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR-3UTR TCA 90 bp TCCCTGCAGGGAGCCAGCCGATGGTGGGGGCAAGACAAACAGGAGAGTTCACAAAACTCACTGCAGCCTTaGCTCCTGGGCTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: SLQGASRWWGQDKQESSQNSLQP*LLGSSD
Trigger: ATCACTTGAGCCCAGGAGTCAAGGCTGCAGTGAGTT...TTGTGAACTCTCCTGTTTGTCTTGCCCCCACCATCGGCTGGCTCCCTGCAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR-3UTR GCA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCCCTTTACCTAGGGCCTaGCAGAAAACACTTCTCATT +
Preference number: 2 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFPLPRA*QKTLLI
Trigger: AATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGG...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR GCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCCCTTTACCTAGGGCCTaGCAGAAAACACTTCTCATT +
Preference number: 2 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFPLPRA*QKTLLI
Trigger: AATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGG...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR CCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAACTAATGGGGGACAGTaGAGGACATGGATCTACCCC +
Preference number: 2 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRTNGGQ*RTWIYP
Trigger: GGGGTAGATCCATGTCCTCCACTGTCCCCCATTAGT...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR CCA 90 bp CAGACAGGTTTGGTTTTATGTAGAAGGCAAAGGGGAGCCATGGGCAGACTGAGAGGATTCCACGGAAGCTaGGGGCCCAGAGTCACGGCC +
Preference number: 2 (lower is better)
Translates to: QTGLVLCRRQRGAMGRLRGFHGS*GPRVTA
Trigger: GGCCGTGACTCTGGGCCCCCAGCTTCCGTGGAATCC...TCTCAGTCTGCCCATGGCTCCCCTTTGCCTTCTACATAAAACCAAACCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR-3UTR CCA 90 bp AGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTGCTGTTTGCATCGGCTaGATTCCACGGAAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SQGSLGQIRDLSPTSWESAVCIG*IPRKLG
Trigger: CCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGC...AGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR-3UTR CCA 90 bp GAAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGATTCCACGGAAGCTaGGGGCCTGCCAGAGTCACG +
Preference number: 2 (lower is better)
Translates to: EVKSGQSGADSRSFSHILGFHGS*GPARVT
Trigger: CGTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCC...CAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546344.5
3UTR CAA 90 bp ATGTTCTCGCGCACAGCTGCATCAAAGGTCTCCTGGGCAATGCGCTaGGAGACCATCTTCGCCTGTGTTGATGTTGGCGTGCAGCCGATA +
Preference number: 2 (lower is better)
Translates to: MFSRTAASKVSWAMR*ETIFACVDVGVQPI
Trigger: TATCGGCTGCACGCCAACATCAACACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR-3UTR GCA 90 bp TTGCCGATTCTGTTCATGTTTCAGGCAAGCGTGACGCACACAGCGGATCCCAGAAGGCCTTGTCCTGTTTaGACTGGTCGCAGAAGCGGG +
Preference number: 2 (lower is better)
Translates to: LPILFMFQASVTHTADPRRPCPV*TGRRSG
Trigger: CCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCT...TCTGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
3UTR-3UTR CCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGAAGTGGCTGGGACATaGGGGCTGCTTTCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKEVAGT*GLLSSV
Trigger: CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTC...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR GCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACCTTTACCTAGGGCCTaGCAGAAAACACTTCTCATT +
Preference number: 2 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGPLPRA*QKTLLI
Trigger: AATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGG...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR GCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTCTGGCCCACAGTGGCTaGCACATTTCAGACAGGGCA +
Preference number: 2 (lower is better)
Translates to: GGASETHFTGKKDKEQRPLAHSG*HISDRA
Trigger: TGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAG...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR GCA 90 bp GAAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGCGCTCCTCAGCTGTTTaGATCGGCTGGATTCCACGG +
Preference number: 2 (lower is better)
Translates to: EVKSGQSGADSRSFSHILRSSAV*IGWIPR
Trigger: CCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCG...CAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR-3UTR GCA 90 bp AGCCAGCCGATGGTGGGGGCAAGACAAACAGGAGAGTTCACAAATGAGGTGACCGAAATGCTTGAGAACTaGCCAAGGTCACACTGGCCC +
Preference number: 2 (lower is better)
Translates to: SQPMVGARQTGEFTNEVTEMLEN*PRSHWP
Trigger: GGGCCAGTGTGACCTTGGGCAGTTCTCAAGCATTTC...GGTCACCTCATTTGTGAACTCTCCTGTTTGTCTTGCCCCCACCATCGGCTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR-3UTR GCA 90 bp TCAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCCTCCTAGGTCTCCTGGGCAATaGGCTTGGAGACCATCTTCG +
Preference number: 2 (lower is better)
Translates to: SDQPLAIQTAPRPLSLPPRSPGQ*AWRPSS
Trigger: CGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCT...AGGAGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR-3UTR CCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGACTAATGGGGGACAGTaGAGGACATGGATCTACCCC +
Preference number: 2 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKTNGGQ*RTWIYP
Trigger: GGGGTAGATCCATGTCCTCCACTGTCCCCCATTAGT...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR CAA 90 bp AGCACCTTCAAGCCTTTGTTCTCCTGCACAATCATCTTGGCATGGTaGTGGGCATGGCCAAAGGGCACACGGATGTCGTCATCGAAGGTC +
Preference number: 2 (lower is better)
Translates to: STFKPLFSCTIILAW*WAWPKGTRMSSSKV
Trigger: GACCTTCGATGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTTGAAGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR CAA 90 bp GCTTCGATGAGCACCTTCAAGCCTTTGTTCTCCTGCACAATCATCTaGGCATGGTTGTGGGCATGGCCAAAGGGCACACGGATGTCGTCA +
Preference number: 2 (lower is better)
Translates to: ASMSTFKPLFSCTII*AWLWAWPKGTRMSS
Trigger: TGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTTGAAGGTGCTCATCGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR-3UTR TCA 90 bp AGGGACCTCGAGTGCTTGTCAGTTTATTCAGGTGAACACTCAAAAACACTGACGCCAGCCCTGCTGAGCTaGGAGCACCCTTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: RDLECLSVYSGEHSKTLTPALLS*EHPFLL
Trigger: CAGCAGGAAAGGGTGCTCTCAGCTCAGCAGGGCTGG...CGTCAGTGTTTTTGAGTGTTCACCTGAATAAACTGACAAGCACTCGAGGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR-3UTR GCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGACCTTTACCTAGGGCCTaGCAGAAAACACTTCTCATT +
Preference number: 2 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRPLPRA*QKTLLI
Trigger: AATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGG...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR CCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTGAAGTGGCTGGGACATaGGGGCTGCTTTCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: GGASETHFTGKKDKEQRPEVAGT*GLLSSV
Trigger: CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTC...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR CCA 90 bp AGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGAGCCTGGCCCACAGTaGCTGCCACATTTCAGACAG +
Preference number: 2 (lower is better)
Translates to: SRAEHLRPILQVRKTRSREPGPQ*LPHFRQ
Trigger: CTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTC...TCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR CCA 90 bp CTCCTGGGATCCGTCTGCAGAGACTTTAGGTGCCGTCTTTACAATGTTGCTCAGTTTCACTGCCTCCTCTaGCCCCATCGCAAACTCCTC +
Preference number: 2 (lower is better)
Translates to: LLGSVCRDFRCRLYNVAQFHCLL*PHRKLL
Trigger: GAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAA...CTGAGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR-3UTR CCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTACTAATGGGGGACAGTaGAGGACATGGATCTACCCC +
Preference number: 2 (lower is better)
Translates to: GGASETHFTGKKDKEQRPTNGGQ*RTWIYP
Trigger: GGGGTAGATCCATGTCCTCCACTGTCCCCCATTAGT...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR CCA 90 bp TTTGGTGGCTTCGATGAGCACCTTCAAGCCTTTGTTCTCCTGCACAATCATCTTTATGCTGACACCTCCTaGGGGCGAGAGCTGGCCACA +
Preference number: 2 (lower is better)
Translates to: FGGFDEHLQAFVLLHNHLYADTS*GRELAT
Trigger: TGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATA...AAGATGATTGTGCAGGAGAACAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR CAA 90 bp TTATCCAGGAACGCTTTGGTGGCTTCGATGAGCACCTTCAAGCCTTaGTTCTCCTGCACAATCATCTTGGCATGGTTGTGGGCATGGCCA +
Preference number: 2 (lower is better)
Translates to: LSRNALVASMSTFKP*FSCTIILAWLWAWP
Trigger: TGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAAGCGTTCCTGGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR-3UTR TCA 90 bp TGTTCACCCAATGATCTTTTATTATCAGGTATCCTGGCTGGCCCAGGACCCAGATTTCAGACAGGGCAGTaGGTGATGGGACGTGCCCTT +
Preference number: 2 (lower is better)
Translates to: CSPNDLLLSGILAGPGPRFQTGQ*VMGRAL
Trigger: AAGGGCACGTCCCATCACTCACTGCCCTGTCTGAAA...TCTGGGTCCTGGGCCAGCCAGGATACCTGATAATAAAAGATCATTGGGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392335.6
ENST00000535612.6
3UTR-3UTR TCA 90 bp GTGCCGTCTTTACAATGTTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACATCTTCGCCTGTGTTaGTGTTGGCGTGCAGCCGAT +
Preference number: 2 (lower is better)
Translates to: VPSLQCCSDQPLAIQTAPHLRLC*CWRAAD
Trigger: ATCGGCTGCACGCCAACATCAACACAGGCGAAGATG...TGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR-3UTR TCA 90 bp AAGTTGCTGGGACCACAGACAGGTTTGGTTTTATGTAGAAGGCAAAGGGGAGCCACCTACCCCGCCACATaGCAGATGAAGAAATGCTTG +
Preference number: 2 (lower is better)
Translates to: KLLGPQTGLVLCRRQRGATYPAT*QMKKCL
Trigger: CAAGCATTTCTTCATCTGTCATGTGGCGGGGTAGGT...GGCTCCCCTTTGCCTTCTACATAAAACCAAACCTGTCTGTGGTCCCAGCAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR-3UTR TCA 90 bp GACCTCGAGTGCTTGTCAGTTTATTCAGGTGAACACTCAAAAACACTGACGGGAAGGAGAGTTCACAAATaGGGTGACCTCAGATGGGGC +
Preference number: 2 (lower is better)
Translates to: DLECLSVYSGEHSKTLTGRRVHK*GDLRWG
Trigger: GCCCCATCTGAGGTCACCTCATTTGTGAACTCTCCT...TCCCGTCAGTGTTTTTGAGTGTTCACCTGAATAAACTGACAAGCACTCGAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR-3UTR GCA 90 bp TGTTCACCCAATGATCTTTTATTATCAGGTATCCTGGCTGGCCCAGGACCCAGACCTTTACCTAGGGCCTaGCAGAAAACACTTCTCATT +
Preference number: 2 (lower is better)
Translates to: CSPNDLLLSGILAGPGPRPLPRA*QKTLLI
Trigger: AATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGG...TCTGGGTCCTGGGCCAGCCAGGATACCTGATAATAAAAGATCATTGGGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392335.6
ENST00000535612.6
3UTR TCA 72 bp CGGGGTGACTGGGTCAGAGGTTTGGGCCAGCCCTGCTaGGCTGAGAGCACCCTTTCCTGCTGGGGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: RGDWVRGLGQPC*AESTLSCWGQG
Trigger: CCCCTGCCCCCAGCAGGAAAGGGTGCTCTCAGCTCAGCAGGGCTGGCCCAAACCTCTGACCCAGTCACCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR CCA 72 bp GCTCGACATGACAACCCAGGTCCCGCAGGGCGGCCTTaGCCACGTCCTCACAGTCACGGTGGGCAGATCGGG +
Preference number: 3 (lower is better)
Translates to: ARHDNPGPAGRP*PRPHSHGGQIG
Trigger: CCCGATCTGCCCACCGTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGACCTGGGTTGTCATGTCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535795.1
3UTR GCA 72 bp GGCCCCCGAGGTCGACGACCTCCTGGCAGAACTCGTTaGGAATGGCCAGGCGGGACAGGGTTCCACAGAGCT +
Preference number: 3 (lower is better)
Translates to: GPRGRRPPGRTR*EWPGGTGFHRA
Trigger: AGCTCTGTGGAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCTCGGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR CCA 72 bp ACCAGAATGCTCAGGCCCCCGAGGTCGACGACCTCCTaGCAGAACTCGTTGCGAATGGCCAGGCGGGACAGG +
Preference number: 3 (lower is better)
Translates to: TRMLRPPRSTTS*QNSLRMARRDR
Trigger: CCTGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCTCGGGGGCCTGAGCATTCTGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR-3UTR CAA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTGGTCATGGCGCCAGGTaGCCCCTCTGGCCTGTCCAC +
Preference number: 3 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCGHGAR*PLWPVH
Trigger: GTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACC...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535795.1
3UTR GCA 72 bp TGCCACATTTCAGACAGGGCAGTGAGTGATGGGACGTaGCCTTTGCCCCCTCTGGTAGGGCGTGGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: CHISDRAVSDGT*PLPPLVGRGAG
Trigger: CCCAGCCCCACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATCACTCACTGCCCTGTCTGAAATGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
3UTR GCA 72 bp GGTGGTCATTGCAGTCGGCTAGCAGGGACACCAGAATaGTCAGGCCCCCGAGGTCGACGACCTCCTGGCAGA +
Preference number: 3 (lower is better)
Translates to: GGHCSRLAGTPE*SGPRGRRPPGR
Trigger: TCTGCCAGGAGGTCGTCGACCTCGGGGGCCTGAGCATTCTGGTGTCCCTGCTAGCCGACTGCAATGACCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR CCA 72 bp CGAGGTCGACGACCTCCTGGCAGAACTCGTTGCGAATaGCCAGGCGGGACAGGGTTCCACAGAGCTCGCTCA +
Preference number: 3 (lower is better)
Translates to: RGRRPPGRTRCE*PGGTGFHRARS
Trigger: TGAGCGAGCTCTGTGGAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR-3UTR CAA 90 bp CTGAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGCAGTGAGTGATGGGGATGGGACGTGCCCTTaGCCCCCTCTGGTAGGGCGT +
Preference number: 3 (lower is better)
Translates to: LSLAHSGCHISDRAVSDGDGTCP*PPLVGR
Trigger: ACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATC...CCCATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
3UTR-3UTR CAA 90 bp TCGACGACCTCCTGGCAGAACTCGTTGCGAATGGCCAGGCGGGACAGGGTTCCACAGGCCTTGTCCTGTTaGCACTGGTCGCAGAAGCGG +
Preference number: 3 (lower is better)
Translates to: STTSWQNSLRMARRDRVPQALSC*HWSQKR
Trigger: CCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCTG...TGGAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGGAGGTCGTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR-3UTR CAA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGTCCCGCAGGGCGGCCTaGGCCACGTCCTCACAGTCA +
Preference number: 3 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRSRRAA*ATSSQS
Trigger: TGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGA...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535795.1
3UTR TCA 72 bp CTGTTTGCACTGGTCGCAGAAGCGGGTGAGGTATGCTaGCACCTCCTGGGGGCGAGAGCTGGCCACAGACTC +
Preference number: 3 (lower is better)
Translates to: LFALVAEAGEVC*HLLGARAGHRL
Trigger: GAGTCTGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGCTTCTGCGACCAGTGCAAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535758.1
ENST00000539985.5
ENST00000545091.5
3UTR CCA 72 bp GGGACAGGGGCCTCCCTGCAGGGAGCCAGCCGATGGTaGGGGCAAGACAAACAGGAGAGTTCACAAATGAGG +
Preference number: 3 (lower is better)
Translates to: GTGASLQGASRW*GQDKQESSQMR
Trigger: CCTCATTTGTGAACTCTCCTGTTTGTCTTGCCCCCACCATCGGCTGGCTCCCTGCAGGGAGGCCCCTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR-3UTR CAA 90 bp TCAGGCCCCCGAGGTCGACGACCTCCTGGCAGAACTCGTTGCGAATGGCCAGGCTTATCCAGGAACGCTTaGGTGGCTTCGATGAGCACC +
Preference number: 3 (lower is better)
Translates to: SGPRGRRPPGRTRCEWPGLSRNA*VASMST
Trigger: GGTGCTCATCGAAGCCACCAAAGCGTTCCTGGATAA...GCCTGGCCATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCTCGGGGGCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR-3UTR CAA 90 bp CGATGGCTCGCAGGGTGCTCAGCACTTGCTTCACGAGCTCCTGAACGCCGCTCTCTCATCTGGTGGTCATaGCAGTCGGCTAGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: RWLAGCSALASRAPERRSLIWWS*QSASRD
Trigger: GTCCCTGCTAGCCGACTGCAATGACCACCAGATGAG...AGAGCGGCGTTCAGGAGCTCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR GCA 72 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTaGTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTC +
Preference number: 3 (lower is better)
Translates to: LAGTQKWLGHGG*FLLCRGLPTRL
Trigger: GAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
3UTR CCA 72 bp GAAGGCCAAGGGAAGGGCACTTCTAGGCAGAGGGCATaGCTTGTCACATGGGGGCTTGTGCAAAGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: EGQGKGTSRQRA*LVTWGLVQRPW
Trigger: CCAGGGCCTTTGCACAAGCCCCCATGTGACAAGCCATGCCCTCTGCCTAGAAGTGCCCTTCCCTTGGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR TCA 72 bp ACCTCAGATGGGGCCCAGTGTCAGAGCCAGAGCACATaGGGTGATGAGATGGGGGTCTCTCCTGGAGAAGGC +
Preference number: 3 (lower is better)
Translates to: TSDGAQCQSQST*GDEMGVSPGEG
Trigger: GCCTTCTCCAGGAGAGACCCCCATCTCATCACCTCATGTGCTCTGGCTCTGACACTGGGCCCCATCTGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR TCA 72 bp GTGATGAGATGGGGGTCTCTCCTGGAGAAGGCAACGTaGGCTGAAACCTCATGTGCTAGGAGGAGCCGGCCA +
Preference number: 3 (lower is better)
Translates to: VMRWGSLLEKAT*AETSCARRSRP
Trigger: TGGCCGGCTCCTCCTAGCACATGAGGTTTCAGCTCACGTTGCCTTCTCCAGGAGAGACCCCCATCTCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR GCA 72 bp CCCCATCGCAAACTCCTCGATGTTCTCGCGCACAGCTaGATCAAAGGTCTCCTGGGCAATGCGCTTGGAGAC +
Preference number: 3 (lower is better)
Translates to: PHRKLLDVLAHS*IKGLLGNALGD
Trigger: GTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAACATCGAGGAGTTTGCGATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR CCA 72 bp GCATGGCTTGTCACATGGGGGCTTGTGCAAAGGCCCTaGGGTGGGGGAATAGGGAGTGAGTACAGTGGAAAG +
Preference number: 3 (lower is better)
Translates to: AWLVTWGLVQRP*GGGIGSEYSGK
Trigger: CTTTCCACTGTACTCACTCCCTATTCCCCCACCCCAGGGCCTTTGCACAAGCCCCCATGTGACAAGCCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR GCA 72 bp CCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTaGCTCCTCTGGCCCCATCGCAAACTCCTCGATGTT +
Preference number: 3 (lower is better)
Translates to: PLRFKLLHGLFH*LLWPHRKLLDV
Trigger: AACATCGAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR CCA 72 bp GCACAGCTGCATCAAAGGTCTCCTGGGCAATGCGCTTaGAGACCATCTTCGCCTGTGTTGATGTTGGCGTGC +
Preference number: 3 (lower is better)
Translates to: AQLHQRSPGQCA*RPSSPVLMLAC
Trigger: GCACGCCAACATCAACACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR-3UTR CAA 90 bp TGTTCACCCAATGATCTTTTATTATCAGGTATCCTGGCTGGCCCAGGACCCAGAGATGGGACGTGCCCTTaGCCCCCTCTGGTAGGGCGT +
Preference number: 3 (lower is better)
Translates to: CSPNDLLLSGILAGPGPRDGTCP*PPLVGR
Trigger: ACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATC...TCTGGGTCCTGGGCCAGCCAGGATACCTGATAATAAAAGATCATTGGGTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392335.6
ENST00000535612.6
3UTR TCA 72 bp TGGGGGCAAGACAAACAGGAGAGTTCACAAATGAGGTaGCCTCAGATGGGGCCCAGTGTCAGAGCCAGAGCA +
Preference number: 3 (lower is better)
Translates to: WGQDKQESSQMR*PQMGPSVRARA
Trigger: TGCTCTGGCTCTGACACTGGGCCCCATCTGAGGTCACCTCATTTGTGAACTCTCCTGTTTGTCTTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR TCA 72 bp GATGGTGGGGGCAAGACAAACAGGAGAGTTCACAAATaGGGTGACCTCAGATGGGGCCCAGTGTCAGAGCCA +
Preference number: 3 (lower is better)
Translates to: DGGGKTNRRVHK*GDLRWGPVSEP
Trigger: TGGCTCTGACACTGGGCCCCATCTGAGGTCACCTCATTTGTGAACTCTCCTGTTTGTCTTGCCCCCACCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR TCA 72 bp AGGTCTTGCCGATTCTGTTCATGTTTCAGGCAAGCGTaGCGCACACAGCGGATCCCAGAGCAGGTCAGGTCA +
Preference number: 3 (lower is better)
Translates to: RSCRFCSCFRQA*RTQRIPEQVRS
Trigger: TGACCTGACCTGCTCTGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
3UTR GCA 72 bp GGGAGGACGCTGGGGCCACCTGGCAGGGACCTCGAGTaGTTGTCAGTTTATTCAGGTGAACACTCAAAAACA +
Preference number: 3 (lower is better)
Translates to: GRTLGPPGRDLE*LSVYSGEHSKT
Trigger: TGTTTTTGAGTGTTCACCTGAATAAACTGACAAGCACTCGAGGTCCCTGCCAGGTGGCCCCAGCGTCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR GCA 72 bp TCTCGCGCACAGCTGCATCAAAGGTCTCCTGGGCAATaGGCTTGGAGACCATCTTCGCCTGTGTTGATGTTG +
Preference number: 3 (lower is better)
Translates to: SRAQLHQRSPGQ*AWRPSSPVLML
Trigger: CAACATCAACACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR GCA 72 bp ACAATGTTGCTCAGATCAACCCCTTGCGATTCAAACTaGTCCACGGCCTCTTTCACTGCCTCCTCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: TMLLRSTPCDSN*STASFTASSGP
Trigger: GGGGCCAGAGGAGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR CCA 72 bp TCGATGTTCTCGCGCACAGCTGCATCAAAGGTCTCCTaGGCAATGCGCTTGGAGACCATCTTCGCCTGTGTT +
Preference number: 3 (lower is better)
Translates to: SMFSRTAASKVS*AMRLETIFACV
Trigger: AACACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAACATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
3UTR-3UTR CAA 90 bp GAAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGACGCTCCTCAGCTGTTaGCATCGGCTGGATTCCACG +
Preference number: 3 (lower is better)
Translates to: EVKSGQSGADSRSFSHILTLLSC*HRLDST
Trigger: CGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGT...CAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR CCA 72 bp CGCCTTAGCCCAAGTTGCTGGGACCACAGACAGGTTTaGTTTTATGTAGAAGGCAAAGGGGAGCCATGGGCA +
Preference number: 3 (lower is better)
Translates to: RLSPSCWDHRQV*FYVEGKGEPWA
Trigger: TGCCCATGGCTCCCCTTTGCCTTCTACATAAAACCAAACCTGTCTGTGGTCCCAGCAACTTGGGCTAAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR CCA 72 bp TCACTGAGCATCTGCAGGATGTCATGTGTGGGCTCCTaGGATCCGTCTGCAGAGACTTTAGGTGCCGTCTTT +
Preference number: 3 (lower is better)
Translates to: SLSICRMSCVGS*DPSAETLGAVF
Trigger: AAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACACATGACATCCTGCAGATGCTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR CCA 72 bp TTCTCCTGCACAATCATCTTGGCATGGTTGTGGGCATaGCCAAAGGGCACACGGATGTCGTCATCGAAGGTC +
Preference number: 3 (lower is better)
Translates to: FSCTIILAWLWA*PKGTRMSSSKV
Trigger: GACCTTCGATGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR CCA 72 bp GCACCTTCAAGCCTTTGTTCTCCTGCACAATCATCTTaGCATGGTTGTGGGCATGGCCAAAGGGCACACGGA +
Preference number: 3 (lower is better)
Translates to: APSSLCSPAQSS*HGCGHGQRAHG
Trigger: TCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTTGAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR GCA 72 bp TGTGGGCTCCTGGGATCCGTCTGCAGAGACTTTAGGTaGCGTCTTTACAATGTTGCTCAGATCAACCCCTTG +
Preference number: 3 (lower is better)
Translates to: CGLLGSVCRDFR*RLYNVAQINPL
Trigger: CAAGGGGTTGATCTGAGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR GCA 72 bp GTGGCTTCGATGAGCACCTTCAAGCCTTTGTTCTCCTaGACAATCATCTTGGCATGGTTGTGGGCATGGCCA +
Preference number: 3 (lower is better)
Translates to: VASMSTFKPLFS*TIILAWLWAWP
Trigger: TGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTTGAAGGTGCTCATCGAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
3UTR-3UTR CAA 90 bp AGCCAGCCGATGGTGGGGGCAAGACAAACAGGAGAGTTCACAAATGAGGTGACCGGACCACAGACAGGTTaGGTTTTATGTAGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: SQPMVGARQTGEFTNEVTGPQTG*VLCRRQ
Trigger: TTGCCTTCTACATAAAACCAAACCTGTCTGTGGTCC...GGTCACCTCATTTGTGAACTCTCCTGTTTGTCTTGCCCCCACCATCGGCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR TCA 72 bp GCTTGTCAGTTTATTCAGGTGAACACTCAAAAACACTaGCGGGAAGCTGAAGGCACAGCAAGTGGGGACAGG +
Preference number: 3 (lower is better)
Translates to: ACQFIQVNTQKH*REAEGTASGDR
Trigger: CCTGTCCCCACTTGCTGTGCCTTCAGCTTCCCGTCAGTGTTTTTGAGTGTTCACCTGAATAAACTGACAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR TCA 72 bp TGGCAGGGACCTCGAGTGCTTGTCAGTTTATTCAGGTaGACACTCAAAAACACTGACGGGAAGCTGAAGGCA +
Preference number: 3 (lower is better)
Translates to: WQGPRVLVSLFR*TLKNTDGKLKA
Trigger: TGCCTTCAGCTTCCCGTCAGTGTTTTTGAGTGTTCACCTGAATAAACTGACAAGCACTCGAGGTCCCTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR TCA 90 bp CCCAGGTCCCGCAGGGCGGCCTTGGCCACGTCCTCACAGTCACGGTGGGCAGATCGCCACCCTCCACGATaGTGCGGCTGTTGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: PRSRRAALATSSQSRWADRHPPR*CGCCRA
Trigger: AGCCCGACAACAGCCGCATCATCGTGGAGGGTGGCG...ATCTGCCCACCGTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGACCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR GCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCCCTGCCCTGCCCACCTaGACGCCGGCCTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFPALPT*TPAFCG
Trigger: CCCGCAGAAGGCCGGCGTGCAGGTGGGCAGGGCAGG...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGCCCCATCCCCTGCCCTaGCCACCTGCACGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLPHPLP*PPARRP
Trigger: AGGCCGGCGTGCAGGTGGGCAGGGCAGGGGATGGGG...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CCA 90 bp AGGCACAGCAAGTGGGGACAGGGGCCTCCCTGCAGGGAGCCAGCCGATGGTGGGCCCCCAGGTCCAGGATaGGCTTCGAGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RHSKWGQGPPCREPADGGPPGPG*ASRRPG
Trigger: GCCAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGG...CCCACCATCGGCTGGCTCCCTGCAGGGAGGCCCCTGTCCCCACTTGCTGTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp TCGGAGCTCGACATGACAACCCAGGTCCCGCAGGGCGGCCTTGGCCACGTCCTCCTGGGCCTGGGGTCATaGCGCCAGGTTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SELDMTTQVPQGGLGHVLLGLGS*RQVAPL
Trigger: CAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAG...GAGGACGTGGCCAAGGCCGCCCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR GCA 90 bp TCGGAGCTCGACATGACAACCCAGGTCCCGCAGGGCGGCCTTGGCCACGTCCTCTGCACGCCGGCCTTCTaGGGGTGTGCCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: SELDMTTQVPQGGLGHVLCTPAF*GCAFMA
Trigger: GGCCATGAAGGCACACCCGCAGAAGGCCGGCGTGCA...GAGGACGTGGCCAAGGCCGCCCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CCA 90 bp AGGGCAGTGAGTGATGGGACGTGCCCTTTGCCCCCTCTGGTAGGGCGTGGGGCTCCACGTGGGGAAAGGTaGGGCGCGCGGTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: RAVSDGTCPLPPLVGRGAPRGER*GARLSP
Trigger: GGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGG...AGCCCCACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATCACTCACTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp AAGCGGGTGAGGTATGCTGACACCTCCTGGGGGCGAGAGCTGGCCACAGACTCCGTCTTCGCGGCCACGTaGGGAAAGGTGGGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: KRVRYADTSWGRELATDSVFAAT*GKVGRA
Trigger: CGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGAC...GGAGTCTGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp GTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACGGCCCAGTCTTCGCGGCCACGTaGGGAAAGGTGGGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: VCIGWIPRKLGACQSHGPVFAAT*GKVGRA
Trigger: CGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGAC...TGGGCCGTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp GCCTGGGGTCATGGCGCCAGGTTGCCCCTCTGGCCTGTCCACAGCTCTCGGAGCCGTCGTTGCCTGCGATaGCTCGCAGGGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AWGHGARLPLWPVHSSRSRRCLR*LAGCSA
Trigger: TGCTGAGCACCCTGCGAGCCATCGCAGGCAACGACG...GCTCCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACCCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CCA 90 bp CTGGGCCTGGGGTCATGGCGCCAGGTTGCCCCTCTGGCCTGTCCACAGCTCTCGGGCTTCGAGAAGGCCTaGCCGTGGGCCACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LGLGSWRQVAPLACPQLSGFEKA*PWATRF
Trigger: AAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCC...CGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CCA 90 bp CTGGCCTGTCCACAGCTCTCGGAGCTCGACATGACAACCCAGGTCCCGCAGGGCCCCGCAGGGCGGCCTTaGCCACGTCCTCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: LACPQLSELDMTTQVPQGPAGRP*PRPHSH
Trigger: GTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGG...GCCCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGACAGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CCA 90 bp ATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACGGCCCAGACTGGCTGGGCCTGGGGTCATaGCGCCAGGTTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: IGWIPRKLGACQSHGPDWLGLGS*RQVAPL
Trigger: CAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAG...CCAGTCTGGGCCGTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp AGGGCAGTGAGTGATGGGACGTGCCCTTTGCCCCCTCTGGTAGGGCGTGGGGCTGGCCCAGACTGGGCCTaGGGTCATGGCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RAVSDGTCPLPPLVGRGAGPDWA*GHGARL
Trigger: CAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCC...AGCCCCACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATCACTCACTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGCGACGGAGGCGTCTTTaGCGCCCCTTCCGGGACGCT +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGRRRRL*RPFRDA
Trigger: AGCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCG...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCAGCGGACAGCGCGCTTaGGCAAGAGAGCCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGSGQRA*AREPGR
Trigger: GCGGCCCGGCTCTCTTGCGCAAGCGCGCTGTCCGCT...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp CTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCCAGAGTCACGGCCCAGGGACAGGGGCCTCCCTaGAGGGAGCCAGCCGATGGT +
Preference number: 4 (lower is better)
Translates to: LFASAGFHGSWGPRVTAQGQGPP*REPADG
Trigger: ACCATCGGCTGGCTCCCTGCAGGGAGGCCCCTGTCC...CTGGGCCGTGACTCTGGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGCCACGTGGGGAAAGGTaGGGCGCGCGGTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLPRGER*GARLSP
Trigger: GGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGG...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp AAGCGGGTGAGGTATGCTGACACCTCCTGGGGGCGAGAGCTGGCCACAGACTCCCCACGTGGGGAAAGGTaGGGCGCGCGGTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: KRVRYADTSWGRELATDSPRGER*GARLSP
Trigger: GGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGG...GGAGTCTGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGGTCTTCGCGGCCACGTaGGGAAAGGTGGGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVVFAAT*GKVGRA
Trigger: CGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGAC...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp ATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACGGCCCAGACTGGCCCCCAGGTCCAGGATaGGCTTCGAGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: IGWIPRKLGACQSHGPDWPPGPG*ASRRPG
Trigger: GCCAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGG...CCAGTCTGGGCCGTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCCCCGCAGGGCGGCCTTaGCCACGTCCTCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFPAGRP*PRPHSH
Trigger: GTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGG...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGCCCGCAGGGCGGCCTTaGCCACGTCCTCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGPAGRP*PRPHSH
Trigger: GTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGG...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACGGCCCACCCGCAGGGCGGCCTTaGCCACGTCCTCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: VCIGWIPRKLGACQSHGPPAGRP*PRPHSH
Trigger: GTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGG...TGGGCCGTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCCTGGGCCTGGGGTCATaGCGCCAGGTTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFLGLGS*RQVAPL
Trigger: CAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAG...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCGGCCCAGACTGGGCCTaGGGTCATGGCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFGPDWA*GHGARL
Trigger: CAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCC...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGGGCCCAGACTGGGCCTaGGGTCATGGCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGGPDWA*GHGARL
Trigger: CAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCC...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp CCCGCAGGGCGGCCTTGGCCACGTCCTCACAGTCACGGTGGGCAGATCGGGCCTGAGCAGAGGCCTGCATaGAACTGCAGTAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PAGRPWPRPHSHGGQIGPEQRPA*NCSKQQ
Trigger: CTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTC...AGGCCCGATCTGCCCACCGTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR TCA 90 bp ATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACGGCCCAGACTGGGAGGTGCAGCCAGGGTaGCGCTCCTCAGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: IGWIPRKLGACQSHGPDWEVQPG*RSSAVC
Trigger: GCAAACAGCTGAGGAGCGTCACCCTGGCTGCACCTC...CCAGTCTGGGCCGTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCGACGGAGGCGTCTTTaGCGCCCCTTCCGGGACGCT +
Preference number: 4 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGRRRRL*RPFRDA
Trigger: AGCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCG...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCGTGGCCACTAGGAGCTaGAGGCCCTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFVATRS*RPWASR
Trigger: CCTGGATGCCCAGGGCCTGCAGCTCCTAGTGGCCAC...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGAGGGCCGCGCAGCTCTaGTCACACACCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGRAAQL*SHTWGL
Trigger: CAGCCCCCAGGTGTGTGAGCAGAGCTGCGCGGCCCT...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TGTCCACAGCTCTCGGAGCTCGACATGACAACCCAGGTCCCGCAGGGCGGCCTTCTTCATGGCCTGCAGTaGTGCCACAGCCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: CPQLSELDMTTQVPQGGLLHGLQ*CHSPAT
Trigger: GGTGGCGGGGCTGTGGCAGCACTGCAGGCCATGAAG...AAGGCCGCCCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR GCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGAAGCGGACAGCGCGCTTaGGCAAGAGAGCCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGSGQRA*AREPGR
Trigger: GCGGCCCGGCTCTCTTGCGCAAGCGCGCTGTCCGCT...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp GTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACGGCCCAGAGAGCACCCTTTCCTaGTGGGGGCAGGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: VCIGWIPRKLGACQSHGPESTLS*WGQGRR
Trigger: CCGTCTCCCCTGCCCCCAGCAGGAAAGGGTGCTCTC...TGGGCCGTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGAGTCTTCGCGGCCACGTaGGGAAAGGTGGGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGVFAAT*GKVGRA
Trigger: CGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGAC...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp GGGGTAGGCCCCCTTCTGGGCCGCGAGGAAGCGGCAGGCCTTGTCCTGTTTGCACATTCTGGGTCAGCGTaGCCACTAGGAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GVGPLLGREEAAGLVLFAHSGSA*PLGAAG
Trigger: GCCTGCAGCTCCTAGTGGCCACGCTGACCCAGAATG...TGCAAACAGGACAAGGCCTGCCGCTTCCTCGCGGCCCAGAAGGGGGCCTACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCCCCCCAGGTCCAGGATaGGCTTCGAGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFPPGPG*ASRRPG
Trigger: GCCAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGG...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGCCCCCAGGTCCAGGATaGGCTTCGAGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLPPGPG*ASRRPG
Trigger: GCCAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGG...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCGCCAGGTTGCCCCTCTaGCCTGTCCACAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFARLPL*PVHSSR
Trigger: CCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGC...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGCCAGGTTGCCCCTCTaGCCTGTCCACAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLARLPL*PVHSSR
Trigger: CCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGC...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCCTGGGCCTGGGGTCATaGCGCCAGGTTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGLGLGS*RQVAPL
Trigger: CAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAG...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGGGCCTGGGGTCATaGCGCCAGGTTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLLGLGS*RQVAPL
Trigger: CAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAG...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCAGGTTGCCCCTCTGGCCTGTCCACAGCTCTCGGAGCTCGACATGACAACCCAGGCCCAGACTGGGCCTaGGGTCATGGCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PGCPSGLSTALGARHDNPGPDWA*GHGARL
Trigger: CAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCC...TGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CCA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGGGCCCAGACTGGGCCTaGGGTCATGGCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGGPDWA*GHGARL
Trigger: CAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCC...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CCA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGAGTCACGGCCCAGACTaGGCCTGGGGTCATGGCGCC +
Preference number: 4 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGSHGPD*AWGHGA
Trigger: GGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACT...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR TCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGGCGGGTGAGGTATGCTaGCACCTCCTGGGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGAGEVC*HLLGAR
Trigger: TCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGC...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCCCCAGCAGGCTTCCCTaGCCACGTCAGTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGPSRLP*PRQCGG
Trigger: GCCACCACACTGACGTGGTCAGGGAAGCCTGCTGGG...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp CGATGGCTCGCAGGGTGCTCAGCACTTGCTTCACGAGCTCCTGAACGCCGCTCTCCCAGCAGGCTTCCCTaGCCACGTCAGTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RWLAGCSALASRAPERRSPSRLP*PRQCGG
Trigger: GCCACCACACTGACGTGGTCAGGGAAGCCTGCTGGG...AGAGCGGCGTTCAGGAGCTCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR TCA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCCGTCATCGAAGGTCATaGCACGCAGGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFRHRRS*HAGPSR
Trigger: CCTGCTGGGCCCTGCGTGTCATGACCTTCGATGACG...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGCGCCACCCTCCACGATaGTGCGGCTGTTGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVRHPPR*CGCCRA
Trigger: AGCCCGACAACAGCCGCATCATCGTGGAGGGTGGCG...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCGCCACCCTCCACGATaGTGCGGCTGTTGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGRHPPR*CGCCRA
Trigger: AGCCCGACAACAGCCGCATCATCGTGGAGGGTGGCG...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp GCCTGGGGTCATGGCGCCAGGTTGCCCCTCTGGCCTGTCCACAGCTCTCGGAGCTTTCAGACAGGGCAGTaGGTGATGGGACGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: AWGHGARLPLWPVHSSRSFQTGQ*VMGRAL
Trigger: AAGGGCACGTCCCATCACTCACTGCCCTGTCTGAAA...GCTCCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR GCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCGACGGAGGCGTCTTTaGCGCCCCTTCCGGGACGCT +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGRRRRL*RPFRDA
Trigger: AGCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCG...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp TGGCTGTCCATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCGACGGAGGCGTCTTTaGCGCCCCTTCCGGGACGCT +
Preference number: 4 (lower is better)
Translates to: WLSISQHRQGIEGLEQKARRRRL*RPFRDA
Trigger: AGCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCG...GGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGGACAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR GCA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTGTGGCCACTAGGAGCTaGAGGCCCTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLVATRS*RPWASR
Trigger: CCTGGATGCCCAGGGCCTGCAGCTCCTAGTGGCCAC...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGGCAGGGACACCAGAATaGTCAGGCCCCCGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGAGTPE*SGPRGR
Trigger: TCGACCTCGGGGGCCTGAGCATTCTGGTGTCCCTGC...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
CDS-3UTR GCA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCCACGTCGTCGTTGCCTaGGATGGCTCGCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFHVVVA*DGSQGA
Trigger: AGCACCCTGCGAGCCATCGCAGGCAACGACGACGTG...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGCACGTCGTCGTTGCCTaGGATGGCTCGCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLHVVVA*DGSQGA
Trigger: AGCACCCTGCGAGCCATCGCAGGCAACGACGACGTG...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGAAGGGCCGCGCAGCTCTaGTCACACACCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGRAAQL*SHTWGL
Trigger: CAGCCCCCAGGTGTGTGAGCAGAGCTGCGCGGCCCT...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGGGCCGCGCAGCTCTaGTCACACACCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCRAAQL*SHTWGL
Trigger: CAGCCCCCAGGTGTGTGAGCAGAGCTGCGCGGCCCT...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACGGCCCAGTGTGCCTTCATGGCCTaGAGTGCTGCCACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: FASAGFHGSWGPARVTAQCAFMA*SAATAP
Trigger: CGGGGCTGTGGCAGCACTGCAGGCCATGAAGGCACA...CTGGGCCGTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCGGCCTTCTGCGGGTGTaGCTTCATGGCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFGLLRV*LHGLQC
Trigger: GCACTGCAGGCCATGAAGGCACACCCGCAGAAGGCC...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGGGCCTTCTGCGGGTGTaGCTTCATGGCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGGLLRV*LHGLQC
Trigger: GCACTGCAGGCCATGAAGGCACACCCGCAGAAGGCC...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCACGCCGGCCTTCTaGGGGTGTGCCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGCTPAF*GCAFMA
Trigger: GGCCATGAAGGCACACCCGCAGAAGGCCGGCGTGCA...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCGGCCTGCATGATGAGTaGCTCAGCCCCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFGLHDE*LSPQVQ
Trigger: CTGGACCTGGGGGCTGAGGCACTCATCATGCAGGCC...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGCCTGCATGATGAGTaGCTCAGCCCCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLGLHDE*LSPQVQ
Trigger: CTGGACCTGGGGGCTGAGGCACTCATCATGCAGGCC...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TGTCCACAGCTCTCGGAGCTCGACATGACAACCCAGGTCCCGCAGGGCGGCCTTGTCATGGCGCCAGGTTaGCCCTCTGGCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: CPQLSELDMTTQVPQGGLVMAPG*PSGLST
Trigger: TGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGAC...AAGGCCGCCCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGTCTTCGCGGCCACGTaGGGAAAGGTGGGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRVFAAT*GKVGRA
Trigger: CGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGAC...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp TGGGGTAGGCCCCCTTCTGGGCCGCGAGGAAGCGGCAGGCCTTGTCCTGTTTGCGCAGGATGTCATGTGTaGGCTCCTGGGATCCGTCTG +
Preference number: 4 (lower is better)
Translates to: WGRPPSGPRGSGRPCPVCAGCHV*APGIRL
Trigger: CAGACGGATCCCAGGAGCCCACACATGACATCCTGC...GCAAACAGGACAAGGCCTGCCGCTTCCTCGCGGCCCAGAAGGGGGCCTACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCCTGGGGGCGAGAGCTaGCCACAGACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGPGGES*PQTPGG
Trigger: ACCTCCAGGAGTCTGTGGCCAGCTCTCGCCCCCAGG...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTAGGAGCTGCAGGCCCTaGGCATCCAGGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLRSCRP*ASRRSG
Trigger: GCCAGACCTCCTGGATGCCCAGGGCCTGCAGCTCCT...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCGAGAAGGCCTGGCCGTaGGCCACCAGGTTTCGGATC +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFEKAWP*ATRFRI
Trigger: GATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTC...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCGGCTTCGAGAAGGCCTaGCCGTGGGCCACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFGFEKA*PWATRF
Trigger: AAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCC...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCCAGAGTCACGGCCCAGGGCTTCGAGAAGGCCTaGCCGTGGGCCACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LFASAGFHGSWGPRVTAQGFEKA*PWATRF
Trigger: AAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCC...CTGGGCCGTGACTCTGGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCCCCCCAGGTCCAGGATaGGCTTCGAGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGPPGPG*ASRRPG
Trigger: GCCAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGG...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGCCCCCAGGTCCAGGATaGGCTTCGAGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVPPGPG*ASRRPG
Trigger: GCCAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGG...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp ACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGCCAGGTTGCCCCTCTaGCCTGTCCACAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: TLLSCLHRLDSTEAGGLPARLPL*PVHSSR
Trigger: CCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGC...TGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGAAGTCACGGCCCAGACTaGGCCTGGGGTCATGGCGCC +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGSHGPD*AWGHGA
Trigger: GGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACT...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCAGTCACGGCCCAGACTaGGCCTGGGGTCATGGCGCC +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPSHGPD*AWGHGA
Trigger: GGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACT...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGAGTCACGGCCCAGACTaGGCCTGGGGTCATGGCGCC +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGSHGPD*AWGHGA
Trigger: GGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACT...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CTGAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGCAGTGAGTGATGGGAGTCACGGCCCAGACTaGGCCTGGGGTCATGGCGCC +
Preference number: 4 (lower is better)
Translates to: LSLAHSGCHISDRAVSDGSHGPD*AWGHGA
Trigger: GGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACT...CCCATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGGACGCTGGGGCCACCTaGCAGGGACCTCGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGDAGAT*QGPRVL
Trigger: AAGCACTCGAGGTCCCTGCCAGGTGGCCCCAGCGTC...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR CAA 72 bp GTCGTTGCCTGCGATGGCTCGCAGGGTGCTCAGCACTaGCTTCACGAGCTCCTGAACGCCGCTCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: VVACDGSQGAQH*LHELLNAALVP
Trigger: AGGGACCAGAGCGGCGTTCAGGAGCTCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATCGCAGGCAACGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR TCA 90 bp AGGGCAGTGAGTGATGGGACGTGCCCTTTGCCCCCTCTGGTAGGGCGTGGGGCTTCAGTGTGGTGGCCATaGTGGGTGATGGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: RAVSDGTCPLPPLVGRGASVWWP*WVMAPV
Trigger: GACTGGTGCCATCACCCATCATGGCCACCACACTGA...AGCCCCACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATCACTCACTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR TCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCCCCAGCAGGCTTCCCTaGCCACGTCAGTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPPSRLP*PRQCGG
Trigger: GCCACCACACTGACGTGGTCAGGGAAGCCTGCTGGG...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
63% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTCGCCACCCTCCACGATaGTGCGGCTGTTGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCRHPPR*CGCCRA
Trigger: AGCCCGACAACAGCCGCATCATCGTGGAGGGTGGCG...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGTCTCGGAGCTCGACATaGCAACCCAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGSRSST*QPRSRR
Trigger: CCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGA...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR GCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGAACGAGGCCACCTCGTaGGCGACGGAGGCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVNEATS*ATEASL
Trigger: CAAAGACGCCTCCGTCGCGCACGAGGTGGCCTCGTT...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGAACGAGGCCACCTCGTaGGCGACGGAGGCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGNEATS*ATEASL
Trigger: CAAAGACGCCTCCGTCGCGCACGAGGTGGCCTCGTT...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCCACGGCCTCTTTCACTaGCTCCTCTGGCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGHGLFH*LLWPHR
Trigger: GCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTG...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGAAGGCCCTGGTCACCTaGAGTGGCCAGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLKALVT*SGQLPG
Trigger: GCCTGGAAGCTGGCCACTGCAGGTGACCAGGGCCTT...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTAAGGCCCTGGTCACCTaGAGTGGCCAGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLKALVT*SGQLPG
Trigger: GCCTGGAAGCTGGCCACTGCAGGTGACCAGGGCCTT...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGGCAGGGACACCAGAATaGTCAGGCCCCCGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGAGTPE*SGPRGR
Trigger: TCGACCTCGGGGGCCTGAGCATTCTGGTGTCCCTGC...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
CDS-3UTR GCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGGCAGGGACACCAGAATaGTCAGGCCCCCGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVAGTPE*SGPRGR
Trigger: TCGACCTCGGGGGCCTGAGCATTCTGGTGTCCCTGC...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
CDS-3UTR GCA 90 bp GTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCTGGTCACCTGCAGCAGGGACACCAGAATaGTCAGGCCCCCGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: VSTDRALRDWSRRPWSPAAGTPE*SGPRGR
Trigger: TCGACCTCGGGGGCCTGAGCATTCTGGTGTCCCTGC...TGCAGGTGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR GCA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCACGTCGTCGTTGCCTaGGATGGCTCGCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGHVVVA*DGSQGA
Trigger: AGCACCCTGCGAGCCATCGCAGGCAACGACGACGTG...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGCTTTCACGTCGTCGTTaGCTGCGATGGCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLLSRRR*LRWLAG
Trigger: CCCTGCGAGCCATCGCAGGCAACGACGACGTGAAAG...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGTGGGGGCTGGTCAGATaGTGGGTCATAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGWGLVR*WVIAAT
Trigger: CGTGGCTGCTATGACCCAGCATCTGACCAGCCCCCA...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGTGGGGGCTGGTCAGATaGTGGGTCATAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLWGLVR*WVIAAT
Trigger: CGTGGCTGCTATGACCCAGCATCTGACCAGCCCCCA...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTAAGGGCCGCGCAGCTCTaGTCACACACCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLRAAQL*SHTWGL
Trigger: CAGCCCCCAGGTGTGTGAGCAGAGCTGCGCGGCCCT...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCTTCATGGCCTGCAGTaGTGCCACAGCCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGLHGLQ*CHSPAT
Trigger: GGTGGCGGGGCTGTGGCAGCACTGCAGGCCATGAAG...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCCTTCATGGCCTGCAGTaGTGCCACAGCCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPLHGLQ*CHSPAT
Trigger: GGTGGCGGGGCTGTGGCAGCACTGCAGGCCATGAAG...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGGGCCTTCTGCGGGTGTaGCTTCATGGCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLGLLRV*LHGLQC
Trigger: GCACTGCAGGCCATGAAGGCACACCCGCAGAAGGCC...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTTGCACGCCGGCCTTCTaGGGGTGTGCCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCCTPAF*GCAFMA
Trigger: GGCCATGAAGGCACACCCGCAGAAGGCCGGCGTGCA...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCGGCCTGCATGATGAGTaGCTCAGCCCCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGGLHDE*LSPQVQ
Trigger: CTGGACCTGGGGGCTGAGGCACTCATCATGCAGGCC...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CTCGACATGACAACCCAGGTCCCGCAGGGCGGCCTTGGCCACGTCCTCACAGTCCTGGCCCACAGTGGCTaGCACATTTCAGACAGGGCA +
Preference number: 4 (lower is better)
Translates to: LDMTTQVPQGGLGHVLTVLAHSG*HISDRA
Trigger: TGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAG...GACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGACCTGGGTTGTCATGTCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR GCA 90 bp AGGGCCAGCACTGCAGGCCGTCCTCGAAATAGCTCAGGAGCACCTACCCCGCCACTTCCTGAAGAAGCCTaGAGCTTGGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RASTAGRPRNSSGAPTPPLPEEA*SLAQAQ
Trigger: CTGGGCCTGGGCCAAGCTGCAGGCTTCTTCAGGAAG...TGGCGGGGTAGGTGCTCCTGAGCTATTTCGAGGACGGCCTGCAGTGCTGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGGCAGCAGGCACTCAGTaGACAGGTGCCGGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGAAGTQ*TGAGLR
Trigger: GCGAAGACCGGCACCTGTGCACTGAGTGCCTGCTGC...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000535612.6
CDS-3UTR CCA 90 bp CGCACAGCTGCATCAAAGGTCTCCTGGGCAATGCGCTTGGAGACCATCTTCGCCCCACGTGGGGAAAGGTaGGGCGCGCGGTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: RTAASKVSWAMRLETIFAPRGER*GARLSP
Trigger: GGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGG...GGCGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTCCTGGGGGCGAGAGCTaGCCACAGACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCPGGES*PQTPGG
Trigger: ACCTCCAGGAGTCTGTGGCCAGCTCTCGCCCCCAGG...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGTGGAGCAGAAGGCCCTaGTCACCTGCAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGWSRRP*SPAVAS
Trigger: GCTGGCCACTGCAGGTGACCAGGGCCTTCTGCTCCA...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp ACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCATGGAGCAGAAGGCCCTaGTCACCTGCAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TLLSCLHRLDSTEAGGLPWSRRP*SPAVAS
Trigger: GCTGGCCACTGCAGGTGACCAGGGCCTTCTGCTCCA...TGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp ATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACGGCCCAGACTGGGGCATCCAGGAGGTCTaGCTGTCCATCAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: IGWIPRKLGACQSHGPDWGIQEV*LSISQH
Trigger: GTGCTGACTGATGGACAGCCAGACCTCCTGGATGCC...CCAGTCTGGGCCGTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCAAGGAGCTGCAGGCCCTaGGCATCCAGGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LSCLHRLDSTEAGGLPESRSCRP*ASRRSG
Trigger: GCCAGACCTCCTGGATGCCCAGGGCCTGCAGCTCCT...TGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGGAGAAGGCCTGGCCGTaGGCCACCAGGTTTCGGATC +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVEKAWP*ATRFRI
Trigger: GATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTC...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCGGCTTCGAGAAGGCCTaGCCGTGGGCCACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGGFEKA*PWATRF
Trigger: AAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCC...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGTCCTCACAGTCACGGTaGGCAGATCGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLSSQSR*ADRACM
Trigger: CATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGA...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGTCCTCACAGTCACGGTaGGCAGATCGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGSSQSR*ADRACM
Trigger: CATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGA...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGCCCGCAGGGCGGCCTTaGCCACGTCCTCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQPAGRP*PRPHSH
Trigger: GTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGG...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACCCGCAGGGCGGCCTTaGCCACGTCCTCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLPAGRP*PRPHSH
Trigger: GTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGG...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACTGGGCCTGGGGTCATaGCGCCAGGTTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLLGLGS*RQVAPL
Trigger: CAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAG...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp TGGAGCAGGAATGACAGGGCCAGCACTGCAGGCCGTCCTCGAAATAGCTCAGGACTGGGCCTGGGGTCATaGCGCCAGGTTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: WSRNDRASTAGRPRNSSGLGLGS*RQVAPL
Trigger: CAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAG...TCCTGAGCTATTTCGAGGACGGCCTGCAGTGCTGGCCCTGTCATTCCTGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGGGCCCAGACTGGGCCTaGGGTCATGGCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQGPDWA*GHGARL
Trigger: CAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCC...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AAGGGAAGGGCACTTCTAGGCAGAGGGCATGGCTTGTCACATGGGGGCTTGTGCGGCCCAGACTGGGCCTaGGGTCATGGCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KGRALLGRGHGLSHGGLCGPDWA*GHGARL
Trigger: CAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCC...GCACAAGCCCCCATGTGACAAGCCATGCCCTCTGCCTAGAAGTGCCCTTCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR TCA 90 bp GGCCCCCTTCTGGGCCGCGAGGAAGCGGCAGGCCTTGTCCTGTTTGCACTGGTCACTCCTGGAGGTCACTaGGCATCTGCAGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: GPLLGREEAAGLVLFALVTPGGH*ASAGCH
Trigger: ATGACATCCTGCAGATGCTCAGTGACCTCCAGGAGT...GACCAGTGCAAACAGGACAAGGCCTGCCGCTTCCTCGCGGCCCAGAAGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR TCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGGCGGGTGAGGTATGCTaGCACCTCCTGGGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQAGEVC*HLLGAR
Trigger: TCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGC...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTGCGGGTGAGGTATGCTaGCACCTCCTGGGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPAGEVC*HLLGAR
Trigger: TCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGC...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp GTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACGGCCCATCAGTGTGGTGGCCATaGTGGGTGATGGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: VCIGWIPRKLGACQSHGPSVWWP*WVMAPV
Trigger: GACTGGTGCCATCACCCATCATGGCCACCACACTGA...TGGGCCGTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR TCA 90 bp CTGAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGCAGTGAGTGATGGGCGTCATCGAAGGTCATaGCACGCAGGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSLAHSGCHISDRAVSDGRHRRS*HAGPSR
Trigger: CCTGCTGGGCCCTGCGTGTCATGACCTTCGATGACG...CCCATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR TCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCGTCATCGAAGGTCATaGCACGCAGGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGRHRRS*HAGPSR
Trigger: CCTGCTGGGCCCTGCGTGTCATGACCTTCGATGACG...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACGTCATCGAAGGTCATaGCACGCAGGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGRHRRS*HAGPSR
Trigger: CCTGCTGGGCCCTGCGTGTCATGACCTTCGATGACG...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTCGCCACCCTCCACGATaGTGCGGCTGTTGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPRHPPR*CGCCRA
Trigger: AGCCCGACAACAGCCGCATCATCGTGGAGGGTGGCG...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGTCTCGGAGCTCGACATaGCAACCCAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGSRSST*QPRSRR
Trigger: CCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGA...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCTCTCGGAGCTCGACATaGCAACCCAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPSRSST*QPRSRR
Trigger: CCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGA...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGAGACAGGGCAGTGAGTaGTGGGACGTGCCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGRQGSE*WDVPFA
Trigger: GGCAAAGGGCACGTCCCATCACTCACTGCCCTGTCT...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp AGGGCAGTGAGTGATGGGACGTGCCCTTTGCCCCCTCTGGTAGGGCGTGGGGCTGAGCAGAGGCCTGCATaGAACTGCAGTAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RAVSDGTCPLPPLVGRGAEQRPA*NCSKQQ
Trigger: CTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTC...AGCCCCACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATCACTCACTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp CTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACCAGCCCTGCTGAGCTaGGAGCACCCTTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSCLHRLDSTEAGGLPESPALLS*EHPFLL
Trigger: CAGCAGGAAAGGGTGCTCTCAGCTCAGCAGGGCTGG...TGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp AGGGCAGTGAGTGATGGGACGTGCCCTTTGCCCCCTCTGGTAGGGCGTGGGGCTAGGTCTCCTGGGCAATaGGCTTGGAGACCATCTTCG +
Preference number: 4 (lower is better)
Translates to: RAVSDGTCPLPPLVGRGARSPGQ*AWRPSS
Trigger: CGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCT...AGCCCCACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATCACTCACTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCGTTCTCGCGCACAGCTaGATCAAAGGTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFVLAHS*IKGLLG
Trigger: GCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAAC...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCACGGCCTCTTTCACTaGCTCCTCTGGCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGHGLFH*LLWPHR
Trigger: GCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTG...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp GCAGGCTTCCCTGACCACGTCAGTGTGGTGGCCATGATGGGTGATGGCACCAGTCACGGCCTCTTTCACTaGCTCCTCTGGCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: AGFPDHVSVVAMMGDGTSHGLFH*LLWPHR
Trigger: GCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTG...ACTGGTGCCATCACCCATCATGGCCACCACACTGACGTGGTCAGGGAAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR GCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAAGGCCCTGGTCACCTaGAGTGGCCAGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCKALVT*SGQLPG
Trigger: GCCTGGAAGCTGGCCACTGCAGGTGACCAGGGCCTT...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CTGCCTCCTCTGGCCCCATCGCAAACTCCTCGATGTTCTCGCGCACAGCTGCATAAGGCCCTGGTCACCTaGAGTGGCCAGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPPLAPSQTPRCSRAQLHKALVT*SGQLPG
Trigger: GCCTGGAAGCTGGCCACTGCAGGTGACCAGGGCCTT...ATGCAGCTGTGCGCGAGAACATCGAGGAGTTTGCGATGGGGCCAGAGGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR GCA 90 bp CCATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCTGGTCAAAGGCCCTGGTCACCTaGAGTGGCCAGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSVSTDRALRDWSRRPWSKALVT*SGQLPG
Trigger: GCCTGGAAGCTGGCCACTGCAGGTGACCAGGGCCTT...TGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR GCA 90 bp GGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGGTGGCCACTAGGAGCTaGAGGCCCTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: GSLGQIRDLSPTSWESPGVATRS*RPWASR
Trigger: CCTGGATGCCCAGGGCCTGCAGCTCCTAGTGGCCAC...CCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCCTGGCAGAACTCGTTaGGAATGGCCAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGPGRTR*EWPGGT
Trigger: TGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGG...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp ACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCACCTGGCAGAACTCGTTaGGAATGGCCAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: TLLSCLHRLDSTEAGGLPPGRTR*EWPGGT
Trigger: TGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGG...TGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCACGTCGTCGTTGCCTaGGATGGCTCGCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGHVVVA*DGSQGA
Trigger: AGCACCCTGCGAGCCATCGCAGGCAACGACGACGTG...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CTGAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGCAGTGAGTGATGGGCACGTCGTCGTTGCCTaGGATGGCTCGCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSLAHSGCHISDRAVSDGHVVVA*DGSQGA
Trigger: AGCACCCTGCGAGCCATCGCAGGCAACGACGACGTG...CCCATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCCACGTCGTCGTTGCCTaGGATGGCTCGCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPHVVVA*DGSQGA
Trigger: AGCACCCTGCGAGCCATCGCAGGCAACGACGACGTG...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCACGTCGTCGTTaGCTGCGATGGCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLLSRRR*LRWLAG
Trigger: CCCTGCGAGCCATCGCAGGCAACGACGACGTGAAAG...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGAGGGCCGCGCAGCTCTaGTCACACACCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRRAAQL*SHTWGL
Trigger: CAGCCCCCAGGTGTGTGAGCAGAGCTGCGCGGCCCT...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGCCGCGCAGCTCTaGTCACACACCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SGQSGADSRSFSHILGVSRAAQL*SHTWGL
Trigger: CAGCCCCCAGGTGTGTGAGCAGAGCTGCGCGGCCCT...GGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp AGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCCTTCATGGCCTGCAGTaGTGCCACAGCCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: SGWDMGAAFFCVEASLQGLHGLQ*CHSPAT
Trigger: GGTGGCGGGGCTGTGGCAGCACTGCAGGCCATGAAG...GCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGACTTCATGGCCTGCAGTaGTGCCACAGCCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRLHGLQ*CHSPAT
Trigger: GGTGGCGGGGCTGTGGCAGCACTGCAGGCCATGAAG...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGTGTGCCTTCATGGCCTaGAGTGCTGCCACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGCAFMA*SAATAP
Trigger: CGGGGCTGTGGCAGCACTGCAGGCCATGAAGGCACA...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CTGAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGCAGTGAGTGATGGGTGTGCCTTCATGGCCTaGAGTGCTGCCACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: LSLAHSGCHISDRAVSDGCAFMA*SAATAP
Trigger: CGGGGCTGTGGCAGCACTGCAGGCCATGAAGGCACA...CCCATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTGGCCTTCTGCGGGTGTaGCTTCATGGCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCGLLRV*LHGLQC
Trigger: GCACTGCAGGCCATGAAGGCACACCCGCAGAAGGCC...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTATGCACGCCGGCCTTCTaGGGGTGTGCCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLCTPAF*GCAFMA
Trigger: GGCCATGAAGGCACACCCGCAGAAGGCCGGCGTGCA...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGAGGCCTGCATGATGAGTaGCTCAGCCCCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGGLHDE*LSPQVQ
Trigger: CTGGACCTGGGGGCTGAGGCACTCATCATGCAGGCC...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CTGAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGCAGTGAGTGATGGGGTCATGGCGCCAGGTTaGCCCTCTGGCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LSLAHSGCHISDRAVSDGVMAPG*PSGLST
Trigger: TGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGAC...CCCATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCCTGGCCCACAGTGGCTaGCACATTTCAGACAGGGCA +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFLAHSG*HISDRA
Trigger: TGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAG...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp AGGGCCAGCACTGCAGGCCGTCCTCGAAATAGCTCAGGAGCACCTACCCCGCCACGCTCCTCAGCTGTTTaGATCGGCTGGATTCCACGG +
Preference number: 4 (lower is better)
Translates to: RASTAGRPRNSSGAPTPPRSSAV*IGWIPR
Trigger: CCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCG...TGGCGGGGTAGGTGCTCCTGAGCTATTTCGAGGACGGCCTGCAGTGCTGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp TGGCTGTCCATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCGCAGCAGGCACTCAGTaGACAGGTGCCGGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: WLSISQHRQGIEGLEQKAAAGTQ*TGAGLR
Trigger: GCGAAGACCGGCACCTGTGCACTGAGTGCCTGCTGC...GGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGGACAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCCACGTGGGGAAAGGTaGGGCGCGCGGTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRPRGER*GARLSP
Trigger: GGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGG...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp ATCTTGGCATGGTTGTGGGCATGGCCAAAGGGCACACGGATGTCGTCATCGAAGGTCTTCGCGGCCACGTaGGGAAAGGTGGGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: ILAWLWAWPKGTRMSSSKVFAAT*GKVGRA
Trigger: CGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGAC...CTTCGATGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGCCTGGGCAATGCGCTTaGAGACCATCTTCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGPGQCA*RPSSPV
Trigger: CACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGG...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGCCTGGGCAATGCGCTTaGAGACCATCTTCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLPGQCA*RPSSPV
Trigger: CACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGG...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCGCAGGATGTCATGTGTaGGCTCCTGGGATCCGTCTG +
Preference number: 4 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFAGCHV*APGIRL
Trigger: CAGACGGATCCCAGGAGCCCACACATGACATCCTGC...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TCCTGGAGGTCACTGAGCATCTGCAGGATGTCATGTGTGGGCTCCTGGGATCCGCCTGGGGGCGAGAGCTaGCCACAGACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SWRSLSICRMSCVGSWDPPGGES*PQTPGG
Trigger: ACCTCCAGGAGTCTGTGGCCAGCTCTCGCCCCCAGG...CGGATCCCAGGAGCCCACACATGACATCCTGCAGATGCTCAGTGACCTCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp CCACGGCCTCTTTCACTGCCTCCTCTGGCCCCATCGCAAACTCCTCGATGTTCTCCTGGGGGCGAGAGCTaGCCACAGACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PRPLSLPPLAPSQTPRCSPGGES*PQTPGG
Trigger: ACCTCCAGGAGTCTGTGGCCAGCTCTCGCCCCCAGG...AGAACATCGAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp CACTGCCTCCTCTGGCCCCATCGCAAACTCCTCGATGTTCTCGCGCACAGCTGCTATGCTGACACCTCCTaGGGGCGAGAGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: HCLLWPHRKLLDVLAHSCYADTS*GRELAT
Trigger: TGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATA...GCAGCTGTGCGCGAGAACATCGAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGATGGAGCAGAAGGCCCTaGTCACCTGCAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGWSRRP*SPAVAS
Trigger: GCTGGCCACTGCAGGTGACCAGGGCCTTCTGCTCCA...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCTGGTCACCTTGGAGCAGAAGGCCCTaGTCACCTGCAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SVSTDRALRDWSRRPWSPWSRRP*SPAVAS
Trigger: GCTGGCCACTGCAGGTGACCAGGGCCTTCTGCTCCA...AGGTGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp GCAGGCTTCCCTGACCACGTCAGTGTGGTGGCCATGATGGGTGATGGCACCAGTTGGAGCAGAAGGCCCTaGTCACCTGCAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGFPDHVSVVAMMGDGTSWSRRP*SPAVAS
Trigger: GCTGGCCACTGCAGGTGACCAGGGCCTTCTGCTCCA...ACTGGTGCCATCACCCATCATGGCCACCACACTGACGTGGTCAGGGAAGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGAGGGCATTGAGGGACTaGAGCAGAAGGCCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLRALRD*SRRPWS
Trigger: TGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCT...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCAGGGCATTGAGGGACTaGAGCAGAAGGCCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFRALRD*SRRPWS
Trigger: TGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCT...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCGGCATCCAGGAGGTCTaGCTGTCCATCAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFGIQEV*LSISQH
Trigger: GTGCTGACTGATGGACAGCCAGACCTCCTGGATGCC...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp AGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCAGGAGCTGCAGGCCCTaGGCATCCAGGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SGWDMGAAFFCVEASLQGRSCRP*ASRRSG
Trigger: GCCAGACCTCCTGGATGCCCAGGGCCTGCAGCTCCT...GCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCATTCTGGGTCAGCGTaGCCACTAGGAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGHSGSA*PLGAAG
Trigger: GCCTGCAGCTCCTAGTGGCCACGCTGACCCAGAATG...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCATTCTGGGTCAGCGTaGCCACTAGGAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLHSGSA*PLGAAG
Trigger: GCCTGCAGCTCCTAGTGGCCACGCTGACCCAGAATG...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGGCATGGTTGTGGGCATaGCCAAAGGGCACACGGATG +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGAWLWA*PKGTRM
Trigger: CATCCGTGTGCCCTTTGGCCATGCCCACAACCATGC...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGAGAACTCGTTGCGAATaGCCAGGCGGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLRTRCE*PGGTGF
Trigger: GAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCT...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGGGGCTGGTCAGATGCTaGGTCATAGCAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGGLVRC*VIAATM
Trigger: CATCGTGGCTGCTATGACCCAGCATCTGACCAGCCC...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GGAAGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGCTTCGAGAAGGCCTaGCCGTGGGCCACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GRSRTVTSVLLAGTQKWLGFEKA*PWATRF
Trigger: AAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCC...CAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AAGACAAGGAGCAGAGGCCTGCATGAAACTGCAGTAAGCAGCAGGCGCCAGGGGCCCCCAGGTCCAGGATaGGCTTCGAGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KTRSRGLHETAVSSRRQGPPGPG*ASRRPG
Trigger: GCCAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGG...CCCCTGGCGCCTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTCCTTGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGCCCGCAGGGCGGCCTTaGCCACGTCCTCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: RAVWGRFEIFLPHPGSLQPAGRP*PRPHSH
Trigger: GTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGG...CTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CCA 90 bp AAGACAAGGAGCAGAGGCCTGCATGAAACTGCAGTAAGCAGCAGGCGCCAGGGGGCCAGGTTGCCCCTCTaGCCTGTCCACAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: KTRSRGLHETAVSSRRQGARLPL*PVHSSR
Trigger: CCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGC...CCCCTGGCGCCTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTCCTTGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGCCAGGTTGCCCCTCTaGCCTGTCCACAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRARLPL*PVHSSR
Trigger: CCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGC...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCCAGAGACAGACAAGCTaGGGCCAAGCAGGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPQRQTS*GQAGRS
Trigger: GCTCCGCCCTGCTTGGCCCCAGCTTGTCTGTCTCTG...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
3UTR CAA 72 bp GCCAAGGGAAGGGCACTTCTAGGCAGAGGGCATGGCTaGTCACATGGGGGCTTGTGCAAAGGCCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: AKGRALLGRGHG*SHGGLCKGPGV
Trigger: CACCCCAGGGCCTTTGCACAAGCCCCCATGTGACAAGCCATGCCCTCTGCCTAGAAGTGCCCTTCCCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR CAA 72 bp TTCTGGGCCGCGAGGAAGCGGCAGGCCTTGTCCTGTTaGCACTGGTCGCAGAAGCGGGTGAGGTATGCTGAC +
Preference number: 4 (lower is better)
Translates to: FWAARKRQALSC*HWSQKRVRYAD
Trigger: GTCAGCATACCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCTGCCGCTTCCTCGCGGCCCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR TCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGCATCTTCGCCTGTGTTaGTGTTGGCGTGCAGCCGAT +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGHLRLC*CWRAAD
Trigger: ATCGGCTGCACGCCAACATCAACACAGGCGAAGATG...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp GTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCGCGGGTGAGGTATGCTaGCACCTCCTGGGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: VRAVWGRFEIFLPHPGSLAGEVC*HLLGAR
Trigger: TCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGC...GAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR TCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTCAGTGTGGTGGCCATaGTGGGTGATGGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVSVWWP*WVMAPV
Trigger: GACTGGTGCCATCACCCATCATGGCCACCACACTGA...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTTCAGTGTGGTGGCCATaGTGGGTGATGGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLSVWWP*WVMAPV
Trigger: GACTGGTGCCATCACCCATCATGGCCACCACACTGA...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp GGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGAGGGATCGCCACCCTCCACGATaGTGCGGCTGTTGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GQIRDLSPTSWESPGRRDRHPPR*CGCCRA
Trigger: AGCCCGACAACAGCCGCATCATCGTGGAGGGTGGCG...ATCCCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR TCA 90 bp TGGAGCAGGAATGACAGGGCCAGCACTGCAGGCCGTCCTCGAAATAGCTCAGGATCTCGGAGCTCGACATaGCAACCCAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: WSRNDRASTAGRPRNSSGSRSST*QPRSRR
Trigger: CCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGA...TCCTGAGCTATTTCGAGGACGGCCTGCAGTGCTGGCCCTGTCATTCCTGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR TCA 90 bp AGGGGCCTCCCTGCAGGGAGCCAGCCGATGGTGGGGGCAAGACAAACAGGAGAGCTGGAGAAGGCAACGTaGGCTGAAACCTCATGTGCT +
Preference number: 4 (lower is better)
Translates to: RGLPAGSQPMVGARQTGELEKAT*AETSCA
Trigger: AGCACATGAGGTTTCAGCTCACGTTGCCTTCTCCAG...CTCTCCTGTTTGTCTTGCCCCCACCATCGGCTGGCTCCCTGCAGGGAGGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGGTTCTCGCGCACAGCTaGATCAAAGGTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGVLAHS*IKGLLG
Trigger: GCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAAC...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGGTTCTCGCGCACAGCTaGATCAAAGGTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLVLAHS*IKGLLG
Trigger: GCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAAC...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGACACGGCCTCTTTCACTaGCTCCTCTGGCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRHGLFH*LLWPHR
Trigger: GCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTG...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CTTCTGGGCCGCGAGGAAGCGGCAGGCCTTGTCCTGTTTGCACTGGTCGCAGAAAGGCCTTGTCCTGTTTaGACTGGTCGCAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: LLGREEAAGLVLFALVAERPCPV*TGRRSG
Trigger: CCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCT...TTCTGCGACCAGTGCAAACAGGACAAGGCCTGCCGCTTCCTCGCGGCCCAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR GCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGAAGGCCCTGGTCACCTaGAGTGGCCAGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQKALVT*SGQLPG
Trigger: GCCTGGAAGCTGGCCACTGCAGGTGACCAGGGCCTT...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGGTGGCCACTAGGAGCTaGAGGCCCTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRVATRS*RPWASR
Trigger: CCTGGATGCCCAGGGCCTGCAGCTCCTAGTGGCCAC...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp AGGGTTCCACAGAGCTCGCTCAGGATGCCAGGGTTATCCAGGAACGCTTTGGTGGTGGCCACTAGGAGCTaGAGGCCCTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RVPQSSLRMPGLSRNALVVATRS*RPWASR
Trigger: CCTGGATGCCCAGGGCCTGCAGCTCCTAGTGGCCAC...CACCAAAGCGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCTGTGGAACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR GCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGCAGAACTCGTTaGGAATGGCCAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGPGRTR*EWPGGT
Trigger: TGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGG...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCGATGGCTCGCAGGGTaGTCAGCACTTGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLRWLAG*SALASR
Trigger: TCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATCG...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCCGATGGCTCGCAGGGTaGTCAGCACTTGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGRWLAG*SALASR
Trigger: TCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATCG...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGCGATGGCTCGCAGGGTaGTCAGCACTTGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVRWLAG*SALASR
Trigger: TCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATCG...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp GGAAGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGCTTTCACGTCGTCGTTaGCTGCGATGGCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRSRTVTSVLLAGTQKWLLSRRR*LRWLAG
Trigger: CCCTGCGAGCCATCGCAGGCAACGACGACGTGAAAG...CAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCCTTTCACGTCGTCGTTaGCTGCGATGGCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPLSRRR*LRWLAG
Trigger: CCCTGCGAGCCATCGCAGGCAACGACGACGTGAAAG...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACCTTTCACGTCGTCGTTaGCTGCGATGGCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SAVCIGWIPRKLGACQSHLSRRR*LRWLAG
Trigger: CCCTGCGAGCCATCGCAGGCAACGACGACGTGAAAG...GTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp GGAAGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGTGGGGGCTGGTCAGATaGTGGGTCATAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: GRSRTVTSVLLAGTQKWLWGLVR*WVIAAT
Trigger: CGTGGCTGCTATGACCCAGCATCTGACCAGCCCCCA...CAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTATGTGCCTTCATGGCCTaGAGTGCTGCCACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLCAFMA*SAATAP
Trigger: CGGGGCTGTGGCAGCACTGCAGGCCATGAAGGCACA...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp GGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGAGGGATTGCACGCCGGCCTTCTaGGGGTGTGCCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: GQIRDLSPTSWESPGRRDCTPAF*GCAFMA
Trigger: GGCCATGAAGGCACACCCGCAGAAGGCCGGCGTGCA...ATCCCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTGTCATGGCGCCAGGTTaGCCCTCTGGCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPVMAPG*PSGLST
Trigger: TGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGAC...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTAGTCATGGCGCCAGGTTaGCCCTCTGGCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLVMAPG*PSGLST
Trigger: TGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGAC...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGTCATGGCGCCAGGTTaGCCCTCTGGCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRVMAPG*PSGLST
Trigger: TGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGAC...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCCTGGGACATGGGGGCTaGTTTCTTCTGTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFLGHGG*FLLCRG
Trigger: GCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAG...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGCTGGCCCACAGTGGCTaGCACATTTCAGACAGGGCA +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVLAHSG*HISDRA
Trigger: TGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAG...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCCTGGGCAATGCGCTTaGAGACCATCTTCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLPGQCA*RPSSPV
Trigger: CACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGG...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGTTTCACTGCCTCCTCTaGCCCCATCGCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGFHCLL*PHRKLL
Trigger: GAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAA...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGTCATGTGTGGGCTCCTaGGATCCGTCTGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLSCVGS*DPSAET
Trigger: AGTCTCTGCAGACGGATCCCAGGAGCCCACACATGA...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGTCATGTGTGGGCTCCTaGGATCCGTCTGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGSCVGS*DPSAET
Trigger: AGTCTCTGCAGACGGATCCCAGGAGCCCACACATGA...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGGCAGGATGTCATGTGTaGGCTCCTGGGATCCGTCTG +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGAGCHV*APGIRL
Trigger: CAGACGGATCCCAGGAGCCCACACATGACATCCTGC...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCGCAGGATGTCATGTGTaGGCTCCTGGGATCCGTCTG +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGAGCHV*APGIRL
Trigger: CAGACGGATCCCAGGAGCCCACACATGACATCCTGC...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGCTGGCCACAGACTCCTaGAGGTCACTGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVLATDS*RSLSIC
Trigger: GCAGATGCTCAGTGACCTCCAGGAGTCTGTGGCCAG...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp AGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGCCTGGGGGCGAGAGCTaGCCACAGACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RAVWGRFEIFLPHPGSLQPGGES*PQTPGG
Trigger: ACCTCCAGGAGTCTGTGGCCAGCTCTCGCCCCCAGG...CTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTTATGCTGACACCTCCTaGGGGCGAGAGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCYADTS*GRELAT
Trigger: TGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATA...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp GGAAGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGTATGCTGACACCTCCTaGGGGCGAGAGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: GRSRTVTSVLLAGTQKWLYADTS*GRELAT
Trigger: TGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATA...CAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp TCCATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCTGGTCTATGCTGACACCTCCTaGGGGCGAGAGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: SISQHRQGIEGLEQKALVYADTS*GRELAT
Trigger: TGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATA...GACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp TCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACTATGCTGACACCTCCTaGGGGCGAGAGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: SAVCIGWIPRKLGACQSHYADTS*GRELAT
Trigger: TGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATA...GTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTTGGAGCAGAAGGCCCTaGTCACCTGCAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPWSRRP*SPAVAS
Trigger: GCTGGCCACTGCAGGTGACCAGGGCCTTCTGCTCCA...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCGGCATCCAGGAGGTCTaGCTGTCCATCAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGGIQEV*LSISQH
Trigger: GTGCTGACTGATGGACAGCCAGACCTCCTGGATGCC...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTCATTCTGGGTCAGCGTaGCCACTAGGAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCHSGSA*PLGAAG
Trigger: GCCTGCAGCTCCTAGTGGCCACGCTGACCCAGAATG...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGGCCTCATCAGCATTCTaGGTCAGCGTGGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLASSAF*VSVATR
Trigger: CCTAGTGGCCACGCTGACCCAGAATGCTGATGAGGC...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp GTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCTGGTCACCTGCAGCCTCATCAGCATTCTaGGTCAGCGTGGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: VSTDRALRDWSRRPWSPAASSAF*VSVATR
Trigger: CCTAGTGGCCACGCTGACCCAGAATGCTGATGAGGC...TGCAGGTGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGGCATGGTTGTGGGCATaGCCAAAGGGCACACGGATG +
Preference number: 4 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGAWLWA*PKGTRM
Trigger: CATCCGTGTGCCCTTTGGCCATGCCCACAACCATGC...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGAGAACTCGTTGCGAATaGCCAGGCGGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLRTRCE*PGGTGF
Trigger: GAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCT...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGAGAACTCGTTGCGAATaGCCAGGCGGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGRTRCE*PGGTGF
Trigger: GAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCT...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCAGGTCGACGACCTCCTaGCAGAACTCGTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFRSTTS*QNSLRM
Trigger: CATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCT...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGTGGTCCCTCATCTGGTaGTCATTGCAGTCGGCTAGC +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGWSLIW*SLQSAS
Trigger: GCTAGCCGACTGCAATGACCACCAGATGAGGGACCA...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
CDS-3UTR CCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGCGTCGTTGCCTGCGATaGCTCGCAGGGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQRRCLR*LAGCSA
Trigger: TGCTGAGCACCCTGCGAGCCATCGCAGGCAACGACG...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CAGGCCTTGTCCTGTTTGCACTGGTCGCAGAAGCGGGTGAGGTATGCTGACACCCGTCGTTGCCTGCGATaGCTCGCAGGGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QALSCLHWSQKRVRYADTRRCLR*LAGCSA
Trigger: TGCTGAGCACCCTGCGAGCCATCGCAGGCAACGACG...GGTGTCAGCATACCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCCTCTGCTCACACACCTaGGGGCTGGTCAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPLCSHT*GLVRCW
Trigger: CCAGCATCTGACCAGCCCCCAGGTGTGTGAGCAGAG...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACTCTGCTCACACACCTaGGGGCTGGTCAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGLCSHT*GLVRCW
Trigger: CCAGCATCTGACCAGCCCCCAGGTGTGTGAGCAGAG...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGAGAAGGCCTGGCCGTaGGCCACCAGGTTTCGGATC +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCREKAWP*ATRFRI
Trigger: GATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTC...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGTCCTCACAGTCACGGTaGGCAGATCGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGSSQSR*ADRACM
Trigger: CATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGA...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGCCCAGACTGGGCCTaGGGTCATGGCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKGPDWA*GHGARL
Trigger: CAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCC...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGAAGTGGCTGGGACATaGGGGCTGCTTTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLEVAGT*GLLSSV
Trigger: CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTC...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCTCTGGCCTGTCCACAGCTCTCGGAGCTCGACATGACAACCCAGGTCCCGCAGAAGTGGCTGGGACATaGGGGCTGCTTTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PSGLSTALGARHDNPGPAEVAGT*GLLSSV
Trigger: CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTC...TGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGACAGGCCAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGGAGCCTGGCCCACAGTaGCTGCCACATTTCAGACAG +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVEPGPQ*LPHFRQ
Trigger: CTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTC...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGCAGAGACAGACAAGCTaGGGCCAAGCAGGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQQRQTS*GQAGRS
Trigger: GCTCCGCCCTGCTTGGCCCCAGCTTGTCTGTCTCTG...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGAGGGATGGATTCCACGGAAGCTaGGGGCCCAGAGTCACGGCC +
Preference number: 4 (lower is better)
Translates to: GQIRDLSPTSWESPGRRDGFHGS*GPRVTA
Trigger: GGCCGTGACTCTGGGCCCCCAGCTTCCGTGGAATCC...ATCCCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGGCTGTTTGCATCGGCTaGATTCCACGGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGAVCIG*IPRKLG
Trigger: CCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGC...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CCA 90 bp TCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACATAGGGCGGGGTGACTaGGTCAGAGGTTTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SAVCIGWIPRKLGACQSHIGRGD*VRGLGQ
Trigger: CTGGCCCAAACCTCTGACCCAGTCACCCCGCCCTAT...GTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR TCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCTGTTTCAGGCAAGCGTaGCGCACACAGCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPCFRQA*RTQRIP
Trigger: TGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACA...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp CTGAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGCAGTGAGTGATGGGTGTTTCAGGCAAGCGTaGCGCACACAGCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LSLAHSGCHISDRAVSDGCFRQA*RTQRIP
Trigger: TGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACA...CCCATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR TCA 90 bp TCCATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCTGGTCTGTTTCAGGCAAGCGTaGCGCACACAGCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: SISQHRQGIEGLEQKALVCFRQA*RTQRIP
Trigger: TGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACA...GACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR TCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCTCAGTGTGGTGGCCATaGTGGGTGATGGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPSVWWP*WVMAPV
Trigger: GACTGGTGCCATCACCCATCATGGCCACCACACTGA...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGCCCAGCAGGCTTCCCTaGCCACGTCAGTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKPSRLP*PRQCGG
Trigger: GCCACCACACTGACGTGGTCAGGGAAGCCTGCTGGG...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp AGGGTTCCACAGAGCTCGCTCAGGATGCCAGGGTTATCCAGGAACGCTTTGGTGCGTCATCGAAGGTCATaGCACGCAGGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RVPQSSLRMPGLSRNALVRHRRS*HAGPSR
Trigger: CCTGCTGGGCCCTGCGTGTCATGACCTTCGATGACG...CACCAAAGCGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCTGTGGAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR TCA 90 bp GTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCGTCATCGAAGGTCATaGCACGCAGGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VRAVWGRFEIFLPHPGSLRHRRS*HAGPSR
Trigger: CCTGCTGGGCCCTGCGTGTCATGACCTTCGATGACG...GAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR TCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGTCTCGGAGCTCGACATaGCAACCCAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRSRSST*QPRSRR
Trigger: CCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGA...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAAGACAGGGCAGTGAGTaGTGGGACGTGCCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRRQGSE*WDVPFA
Trigger: GGCAAAGGGCACGTCCCATCACTCACTGCCCTGTCT...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGGAGCAGAGGCCTGCATaGAACTGCAGTAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLEQRPA*NCSKQQ
Trigger: CTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTC...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp ATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCTGGTCACCGGCGGAAGGATCACATaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: ISQHRQGIEGLEQKALVTGGRIT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCATGTGATCCTTCCGCC...GGTGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR TCA 90 bp GGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGAGGGATTTGGGCCAGCCCTGCTaGGCTGAGAGCACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GQIRDLSPTSWESPGRRDLGQPC*AESTLS
Trigger: GGAAAGGGTGCTCTCAGCTCAGCAGGGCTGGCCCAA...ATCCCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR TCA 90 bp CTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCCAGAGTCACGGCCCAGTGGGGGAATAGGGAGTaGGTACAGTGGAAAGACTGG +
Preference number: 4 (lower is better)
Translates to: LFASAGFHGSWGPRVTAQWGNRE*VQWKDW
Trigger: CCAGTCTTTCCACTGTACTCACTCCCTATTCCCCCA...CTGGGCCGTGACTCTGGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGAGCAGGGAAATGTTTTaGCTCCAGAGCGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLSREMF*LQSVRP
Trigger: TGGGCGGACGCTCTGGAGGCAAAACATTTCCCTGCT...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp AGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGAACGAGGCCACCTCGTaGGCGACGGAGGCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RAVWGRFEIFLPHPGSLQNEATS*ATEASL
Trigger: CAAAGACGCCTCCGTCGCGCACGAGGTGGCCTCGTT...CTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGGTTCTCGCGCACAGCTaGATCAAAGGTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGVLAHS*IKGLLG
Trigger: GCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAAC...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp AGGCGGGACAGGGTTCCACAGAGCTCGCTCAGGATGCCAGGGTTATCCAGGAACGTTCTCGCGCACAGCTaGATCAAAGGTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RRDRVPQSSLRMPGLSRNVLAHS*IKGLLG
Trigger: GCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAAC...GTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCTGTGGAACCCTGTCCCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR GCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGCTCCTGGGATCCGTCTaGAGAGACTTTAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVLLGSV*RDFRCR
Trigger: ACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAG...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGGCCTTGTCCTGTTTaGACTGGTCGCAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCRPCPV*TGRRSG
Trigger: CCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCT...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp GAGGAAGCGGCAGGCCTTGTCCTGTTTGCACTGGTCGCAGAAGCGGGTGAGGTAAGGCCTTGTCCTGTTTaGACTGGTCGCAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: EEAAGLVLFALVAEAGEVRPCPV*TGRRSG
Trigger: CCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCT...TACCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCTGCCGCTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535758.1
ENST00000539985.5
ENST00000545091.5
CDS-3UTR GCA 90 bp GCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAAAGGCCCTGGTCACCTaGAGTGGCCAGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AVWGRFEIFLPHPGSLQGKALVT*SGQLPG
Trigger: GCCTGGAAGCTGGCCACTGCAGGTGACCAGGGCCTT...TCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGTGGCCACTAGGAGCTaGAGGCCCTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKVATRS*RPWASR
Trigger: CCTGGATGCCCAGGGCCTGCAGCTCCTAGTGGCCAC...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCCGATGGCTCGCAGGGTaGTCAGCACTTGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPRWLAG*SALASR
Trigger: TCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATCG...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCGATGGCTCGCAGGGTaGTCAGCACTTGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGRWLAG*SALASR
Trigger: TCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATCG...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTCTTTCACGTCGTCGTTaGCTGCGATGGCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPLSRRR*LRWLAG
Trigger: CCCTGCGAGCCATCGCAGGCAACGACGACGTGAAAG...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp AAGACAAGGAGCAGAGGCCTGCATGAAACTGCAGTAAGCAGCAGGCGCCAGGGGTGGGGGCTGGTCAGATaGTGGGTCATAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: KTRSRGLHETAVSSRRQGWGLVR*WVIAAT
Trigger: CGTGGCTGCTATGACCCAGCATCTGACCAGCCCCCA...CCCCTGGCGCCTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTCCTTGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp GGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGAGGGATACTTCATGGCCTGCAGTaGTGCCACAGCCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: GRFEIFLPHPGSLQGGGILHGLQ*CHSPAT
Trigger: GGTGGCGGGGCTGTGGCAGCACTGCAGGCCATGAAG...TATCCCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp TCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCGGCCTTCTGCGGGTGTaGCTTCATGGCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SGQSGADSRSFSHILGVSGLLRV*LHGLQC
Trigger: GCACTGCAGGCCATGAAGGCACACCCGCAGAAGGCC...GGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCGGTTTCGGATCAGCATaGAAGCCTGTTTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFGFGSA*KPVSAR
Trigger: GCGTGCAGAAACAGGCTTGCATGCTGATCCGAAACC...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGGGCCTGCATGATGAGTaGCTCAGCCCCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRGLHDE*LSPQVQ
Trigger: CTGGACCTGGGGGCTGAGGCACTCATCATGCAGGCC...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp GGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGAGGGATGGCCTGCATGATGAGTaGCTCAGCCCCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GQIRDLSPTSWESPGRRDGLHDE*LSPQVQ
Trigger: CTGGACCTGGGGGCTGAGGCACTCATCATGCAGGCC...ATCCCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR GCA 90 bp TCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCGTCATGGCGCCAGGTTaGCCCTCTGGCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SGQSGADSRSFSHILGVSVMAPG*PSGLST
Trigger: TGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGAC...GGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR GCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGGTGAGTGATGGGACGTaGCCTTTGCCCCCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGVSDGT*PLPPLV
Trigger: TACCAGAGGGGGCAAAGGGCACGTCCCATCACTCAC...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp AAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCGAGAGCACCCTTTCCTaGTGGGGGCAGGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: KSGQSGADSRSFSHILGVESTLS*WGQGRR
Trigger: CCGTCTCCCCTGCCCCCAGCAGGAAAGGGTGCTCTC...GACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR GCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGGGTTTCGGATCAGCATaGAAGCCTGTTTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLGFGSA*KPVSGG
Trigger: GCCCCCAGAAACAGGCTTGCATGCTGATCCGAAACC...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535478.5
CDS-3UTR CCA 90 bp TGGCTGTCCATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCCTGGGCAATGCGCTTaGAGACCATCTTCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: WLSISQHRQGIEGLEQKAPGQCA*RPSSPV
Trigger: CACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGG...GGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGGACAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGGCATCAAAGGTCTCCTaGGCAATGCGCTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLASKVS*AMRLET
Trigger: GGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGC...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTGCATCAAAGGTCTCCTaGGCAATGCGCTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLASKVS*AMRLET
Trigger: GGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGC...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CACTGCCTCCTCTGGCCCCATCGCAAACTCCTCGATGTTCTCGCGCACAGCTGCGCATCAAAGGTCTCCTaGGCAATGCGCTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: HCLLWPHRKLLDVLAHSCASKVS*AMRLET
Trigger: GGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGC...GCAGCTGTGCGCGAGAACATCGAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTTTTCACTGCCTCCTCTaGCCCCATCGCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLFHCLL*PHRKLL
Trigger: GAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAA...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCCTGGCCACAGACTCCTaGAGGTCACTGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPLATDS*RSLSIC
Trigger: GCAGATGCTCAGTGACCTCCAGGAGTCTGTGGCCAG...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTCTGGCCACAGACTCCTaGAGGTCACTGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCLATDS*RSLSIC
Trigger: GCAGATGCTCAGTGACCTCCAGGAGTCTGTGGCCAG...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGCCTGGGGGCGAGAGCTaGCCACAGACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKPGGES*PQTPGG
Trigger: ACCTCCAGGAGTCTGTGGCCAGCTCTCGCCCCCAGG...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTATATGCTGACACCTCCTaGGGGCGAGAGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLYADTS*GRELAT
Trigger: TGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATA...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CTTCTGGGCCGCGAGGAAGCGGCAGGCCTTGTCCTGTTTGCACTGGTCGCAGAATTGTCCTGTTTGCACTaGTCGCAGAAGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LLGREEAAGLVLFALVAELSCLH*SQKRVR
Trigger: CCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAA...TTCTGCGACCAGTGCAAACAGGACAAGGCCTGCCGCTTCCTCGCGGCCCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGTTGTCCTGTTTGCACTaGTCGCAGAAGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGLSCLH*SQKRVR
Trigger: CCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAA...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGTGGAGCAGAAGGCCCTaGTCACCTGCAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRWSRRP*SPAVAS
Trigger: GCTGGCCACTGCAGGTGACCAGGGCCTTCTGCTCCA...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGAGGGCATTGAGGGACTaGAGCAGAAGGCCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGRALRD*SRRPWS
Trigger: TGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCT...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CGGGACAGGGTTCCACAGAGCTCGCTCAGGATGCCAGGGTTATCCAGGAACGCTAGGGCATTGAGGGACTaGAGCAGAAGGCCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RDRVPQSSLRMPGLSRNARALRD*SRRPWS
Trigger: TGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCT...AGCGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCTGTGGAACCCTGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGGGCATCCAGGAGGTCTaGCTGTCCATCAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGGIQEV*LSISQH
Trigger: GTGCTGACTGATGGACAGCCAGACCTCCTGGATGCC...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTGCCTCATCAGCATTCTaGGTCAGCGTGGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCASSAF*VSVATR
Trigger: CCTAGTGGCCACGCTGACCCAGAATGCTGATGAGGC...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGAGCCTCATCAGCATTCTaGGTCAGCGTGGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGASSAF*VSVATR
Trigger: CCTAGTGGCCACGCTGACCCAGAATGCTGATGAGGC...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCATCTTGGCATGGTTGTaGGCATGGCCAAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFILAWL*AWPKGT
Trigger: TGTGCCCTTTGGCCATGCCCACAACCATGCCAAGAT...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGAAGAACTCGTTGCGAATaGCCAGGCGGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGRTRCE*PGGTGF
Trigger: GAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCT...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCAAGAACTCGTTGCGAATaGCCAGGCGGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LSCLHRLDSTEAGGLPESRTRCE*PGGTGF
Trigger: GAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCT...TGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTAGGTCGACGACCTCCTaGCAGAACTCGTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLRSTTS*QNSLRM
Trigger: CATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCT...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCCTCTGGTCCCTCATCTaGTGGTCATTGCAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGLWSLI*WSLQSA
Trigger: AGCCGACTGCAATGACCACCAGATGAGGGACCAGAG...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
CDS-3UTR CCA 90 bp CAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCACGTCGTTGCCTGCGATaGCTCGCAGGGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QGSLGQIRDLSPTSWESPRRCLR*LAGCSA
Trigger: TGCTGAGCACCCTGCGAGCCATCGCAGGCAACGACG...TGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGACTCTGCTCACACACCTaGGGGCTGGTCAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRLCSHT*GLVRCW
Trigger: CCAGCATCTGACCAGCCCCCAGGTGTGTGAGCAGAG...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGAGAAGGCCTGGCCGTaGGCCACCAGGTTTCGGATC +
Preference number: 4 (lower is better)
Translates to: AVWGRFEIFLPHPGSLQGEKAWP*ATRFRI
Trigger: GATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTC...TCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CCA 90 bp CAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGCTTCGAGAAGGCCTaGCCGTGGGCCACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: QGSLGQIRDLSPTSWESPGFEKA*PWATRF
Trigger: AAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCC...TGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTTCCTCACAGTCACGGTaGGCAGATCGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPSSQSR*ADRACM
Trigger: CATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGA...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACACCCGCAGGGCGGCCTTaGCCACGTCCTCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTPAGRP*PRPHSH
Trigger: GTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGG...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCGCCAGGTTGCCCCTCTaGCCTGTCCACAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: KSGQSGADSRSFSHILGVARLPL*PVHSSR
Trigger: CCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGC...GACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACAAGTCACGGCCCAGACTaGGCCTGGGGTCATGGCGCC +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTSHGPD*AWGHGA
Trigger: GGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACT...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCACTAATGGGGGACAGTaGAGGACATGGATCTACCCC +
Preference number: 4 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFTNGGQ*RTWIYP
Trigger: GGGGTAGATCCATGTCCTCCACTGTCCCCCATTAGT...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCTCTGGCCTGTCCACAGCTCTCGGAGCTCGACATGACAACCCAGGTCCCGCAACTAATGGGGGACAGTaGAGGACATGGATCTACCCC +
Preference number: 4 (lower is better)
Translates to: PSGLSTALGARHDNPGPATNGGQ*RTWIYP
Trigger: GGGGTAGATCCATGTCCTCCACTGTCCCCCATTAGT...TGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGACAGGCCAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCGAAGTGGCTGGGACATaGGGGCTGCTTTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGEVAGT*GLLSSV
Trigger: CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTC...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GGAAGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGAGCCTGGCCCACAGTaGCTGCCACATTTCAGACAG +
Preference number: 4 (lower is better)
Translates to: GRSRTVTSVLLAGTQKWLEPGPQ*LPHFRQ
Trigger: CTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTC...CAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTATCAGGTATCCTGGCTaGCCCAGGACCCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCIRYPG*PRTQRQ
Trigger: CTGTCTCTGGGTCCTGGGCCAGCCAGGATACCTGAT...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp AGGGCCAGCACTGCAGGCCGTCCTCGAAATAGCTCAGGAGCACCTACCCCGCCAGTACAGTGGAAAGACTaGGAAATGGGCAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RASTAGRPRNSSGAPTPPVQWKD*EMGKAW
Trigger: CCAGGCCTTGCCCATTTCCCAGTCTTTCCACTGTAC...TGGCGGGGTAGGTGCTCCTGAGCTATTTCGAGGACGGCCTGCAGTGCTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp CAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGATTCCACGGAAGCTaGGGGCCTGCCAGAGTCACG +
Preference number: 4 (lower is better)
Translates to: QGSLGQIRDLSPTSWESPGFHGS*GPARVT
Trigger: CGTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCC...TGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR TCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCATCTTCGCCTGTGTTaGTGTTGGCGTGCAGCCGAT +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGHLRLC*CWRAAD
Trigger: ATCGGCTGCACGCCAACATCAACACAGGCGAAGATG...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGACTCCTGGAGGTCACTaGGCATCTGCAGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGTPGGH*ASAGCH
Trigger: ATGACATCCTGCAGATGCTCAGTGACCTCCAGGAGT...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp GTTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCGCGGGTGAGGTATGCTaGCACCTCCTGGGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: VAQINPLRFKLLHGLFHCAGEVC*HLLGAR
Trigger: TCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGC...GCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR TCA 90 bp TCAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCCTCCTGCGGGTGAGGTATGCTaGCACCTCCTGGGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: SDQPLAIQTAPRPLSLPPAGEVC*HLLGAR
Trigger: TCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGC...AGGAGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR TCA 90 bp TTGCCGATTCTGTTCATGTTTCAGGCAAGCGTGACGCACACAGCGGATCCCAGAGCGGGTGAGGTATGCTaGCACCTCCTGGGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: LPILFMFQASVTHTADPRAGEVC*HLLGAR
Trigger: TCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGC...TCTGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR TCA 90 bp CCTGGGCAATGCGCTTGGAGACCATCTTCGCCTGTGTTGATGTTGGCGTGCAGCTGTTTCAGGCAAGCGTaGCGCACACAGCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: PGQCAWRPSSPVLMLACSCFRQA*RTQRIP
Trigger: TGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACA...GCTGCACGCCAACATCAACACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR TCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGTCTCGGAGCTCGACATaGCAACCCAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKSRSST*QPRSRR
Trigger: CCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGA...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCATCTACCCCCATTCCTaGGTCACACGACTCACCCAG +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPIYPHS*VTRLTQ
Trigger: CTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGAT...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCTTTCAGACAGGGCAGTaGGTGATGGGACGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPFQTGQ*VMGRAL
Trigger: AAGGGCACGTCCCATCACTCACTGCCCTGTCTGAAA...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp GGAAGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGTTTCAGACAGGGCAGTaGGTGATGGGACGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GRSRTVTSVLLAGTQKWLFQTGQ*VMGRAL
Trigger: AAGGGCACGTCCCATCACTCACTGCCCTGTCTGAAA...CAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGGAGCAGAGGCCTGCATaGAACTGCAGTAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGEQRPA*NCSKQQ
Trigger: CTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTC...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp GGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGAGGGATAGAGGTGCAGCCAGGGTaGCGCTCCTCAGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: GRFEIFLPHPGSLQGGGIEVQPG*RSSAVC
Trigger: GCAAACAGCTGAGGAGCGTCACCCTGGCTGCACCTC...TATCCCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR TCA 90 bp AGCCAGCCGATGGTGGGGGCAAGACAAACAGGAGAGTTCACAAATGAGGTGACCCCAGCCCTGCTGAGCTaGGAGCACCCTTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SQPMVGARQTGEFTNEVTPALLS*EHPFLL
Trigger: CAGCAGGAAAGGGTGCTCTCAGCTCAGCAGGGCTGG...GGTCACCTCATTTGTGAACTCTCCTGTTTGTCTTGCCCCCACCATCGGCTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR TCA 90 bp AGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTTTGGGCCAGCCCTGCTaGGCTGAGAGCACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SQGSLGQIRDLSPTSWESLGQPC*AESTLS
Trigger: GGAAAGGGTGCTCTCAGCTCAGCAGGGCTGGCCCAA...AGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR TCA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGAACTCACTGCAGCCTTaGCTCCTGGGCTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGNSLQP*LLGSSD
Trigger: ATCACTTGAGCCCAGGAGTCAAGGCTGCAGTGAGTT...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCAGCAGGGAAATGTTTTaGCTCCAGAGCGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPSREMF*LQSVRP
Trigger: TGGGCGGACGCTCTGGAGGCAAAACATTTCCCTGCT...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp AAACTCCTCGATGTTCTCGCGCACAGCTGCATCAAAGGTCTCCTGGGCAATGCGAACGAGGCCACCTCGTaGGCGACGGAGGCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: KLLDVLAHSCIKGLLGNANEATS*ATEASL
Trigger: CAAAGACGCCTCCGTCGCGCACGAGGTGGCCTCGTT...CGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAACATCGAGGAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR GCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCAGGTCTCCTGGGCAATaGGCTTGGAGACCATCTTCG +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPRSPGQ*AWRPSS
Trigger: CGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCT...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCCTCCTCCACGGCCTCTTTCACTaGCTCCTCTGGCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: QINPLRFKLLHGLFHCLLHGLFH*LLWPHR
Trigger: GCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTG...GAGGAGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR GCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCCTCAGATCAACCCCTTaGGATTCAAACTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFLRSTP*DSNCST
Trigger: CGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAG...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp AGGGCAGTGAGTGATGGGACGTGCCCTTTGCCCCCTCTGGTAGGGCGTGGGGCTCCGTCTTTACAATGTTaGTCAGATCAACCCCTTGCG +
Preference number: 4 (lower is better)
Translates to: RAVSDGTCPLPPLVGRGAPSLQC*SDQPLA
Trigger: CGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGG...AGCCCCACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATCACTCACTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGAGGTCACTGAGCATCTaGAGGATGTCATGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVRSLSI*RMSCVG
Trigger: GCCCACACATGACATCCTGCAGATGCTCAGTGACCT...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp AAGACAAGGAGCAGAGGCCTGCATGAAACTGCAGTAAGCAGCAGGCGCCAGGGGAGGCCTTGTCCTGTTTaGACTGGTCGCAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: KTRSRGLHETAVSSRRQGRPCPV*TGRRSG
Trigger: CCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCT...CCCCTGGCGCCTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTCCTTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCCTGGCAGAACTCGTTaGGAATGGCCAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRPGRTR*EWPGGT
Trigger: TGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGG...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp GGCATGGTTGTGGGCATGGCCAAAGGGCACACGGATGTCGTCATCGAAGGTCATCCTGGCAGAACTCGTTaGGAATGGCCAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: GMVVGMAKGHTDVVIEGHPGRTR*EWPGGT
Trigger: TGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGG...ATGACCTTCGATGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR GCA 90 bp GGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGAGGGATTGGGGGCTGGTCAGATaGTGGGTCATAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: GQIRDLSPTSWESPGRRDWGLVR*WVIAAT
Trigger: CGTGGCTGCTATGACCCAGCATCTGACCAGCCCCCA...ATCCCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGTGTGCCTTCATGGCCTaGAGTGCTGCCACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKCAFMA*SAATAP
Trigger: CGGGGCTGTGGCAGCACTGCAGGCCATGAAGGCACA...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCGGTTTCGGATCAGCATaGAAGCCTGTTTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGGFGSA*KPVSAR
Trigger: GCGTGCAGAAACAGGCTTGCATGCTGATCCGAAACC...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTGGTTTCGGATCAGCATaGAAGCCTGTTTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLGFGSA*KPVSAR
Trigger: GCGTGCAGAAACAGGCTTGCATGCTGATCCGAAACC...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGGGTTTCGGATCAGCATaGAAGCCTGTTTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGGFGSA*KPVSAR
Trigger: GCGTGCAGAAACAGGCTTGCATGCTGATCCGAAACC...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR GCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGTCATGGCGCCAGGTTaGCCCTCTGGCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKVMAPG*PSGLST
Trigger: TGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGAC...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TTGAGAACTGCCCAAGGTCACACTGGCCCAGAAGTTAAGTCAGGGCAGTCTGGGGTCATGGCGCCAGGTTaGCCCTCTGGCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LRTAQGHTGPEVKSGQSGVMAPG*PSGLST
Trigger: TGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGAC...CCCAGACTGCCCTGACTTAACTTCTGGGCCAGTGTGACCTTGGGCAGTTCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACTGGGACATGGGGGCTaGTTTCTTCTGTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGLGHGG*FLLCRG
Trigger: GCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAG...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCTGGGACATGGGGGCTaGTTTCTTCTGTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGLGHGG*FLLCRG
Trigger: GCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAG...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGGTGAGTGATGGGACGTaGCCTTTGCCCCCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQVSDGT*PLPPLV
Trigger: TACCAGAGGGGGCAAAGGGCACGTCCCATCACTCAC...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTGTGAGTGATGGGACGTaGCCTTTGCCCCCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPVSDGT*PLPPLV
Trigger: TACCAGAGGGGGCAAAGGGCACGTCCCATCACTCAC...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp AAGACAAGGAGCAGAGGCCTGCATGAAACTGCAGTAAGCAGCAGGCGCCAGGGGGTGAGTGATGGGACGTaGCCTTTGCCCCCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: KTRSRGLHETAVSSRRQGVSDGT*PLPPLV
Trigger: TACCAGAGGGGGCAAAGGGCACGTCCCATCACTCAC...CCCCTGGCGCCTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTCCTTGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACTGGCCCACAGTGGCTaGCACATTTCAGACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLLAHSG*HISDRA
Trigger: TGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAG...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GAGGTCACTGAGCATCTGCAGGATGTCATGTGTGGGCTCCTGGGATCCGTCTGCCCTGGGCAATGCGCTTaGAGACCATCTTCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: EVTEHLQDVMCGLLGSVCPGQCA*RPSSPV
Trigger: CACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGG...GCAGACGGATCCCAGGAGCCCACACATGACATCCTGCAGATGCTCAGTGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp TTCCCTGACCACGTCAGTGTGGTGGCCATGATGGGTGATGGCACCAGTCAGCAGCCTGGGCAATGCGCTTaGAGACCATCTTCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: FPDHVSVVAMMGDGTSQQPGQCA*RPSSPV
Trigger: CACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGG...CTGCTGACTGGTGCCATCACCCATCATGGCCACCACACTGACGTGGTCAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp CTGAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGCAGTGAGTGATGGGGCATCAAAGGTCTCCTaGGCAATGCGCTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: LSLAHSGCHISDRAVSDGASKVS*AMRLET
Trigger: GGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGC...CCCATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTGCATCAAAGGTCTCCTaGGCAATGCGCTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCASKVS*AMRLET
Trigger: GGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGC...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGTTTCACTGCCTCCTCTaGCCCCATCGCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGFHCLL*PHRKLL
Trigger: GAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAA...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp AGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCGCAGGATGTCATGTGTaGGCTCCTGGGATCCGTCTG +
Preference number: 4 (lower is better)
Translates to: SGWDMGAAFFCVEASLQGAGCHV*APGIRL
Trigger: CAGACGGATCCCAGGAGCCCACACATGACATCCTGC...GCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACTGGCCACAGACTCCTaGAGGTCACTGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLLATDS*RSLSIC
Trigger: GCAGATGCTCAGTGACCTCCAGGAGTCTGTGGCCAG...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TTGCCGATTCTGTTCATGTTTCAGGCAAGCGTGACGCACACAGCGGATCCCAGACCTGGGGGCGAGAGCTaGCCACAGACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LPILFMFQASVTHTADPRPGGES*PQTPGG
Trigger: ACCTCCAGGAGTCTGTGGCCAGCTCTCGCCCCCAGG...TCTGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGTTGTCCTGTTTGCACTaGTCGCAGAAGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGLSCLH*SQKRVR
Trigger: CCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAA...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGATTGTCCTGTTTGCACTaGTCGCAGAAGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGLSCLH*SQKRVR
Trigger: CCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAA...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCTGGTCATTGTCCTGTTTGCACTaGTCGCAGAAGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PSVSTDRALRDWSRRPWSLSCLH*SQKRVR
Trigger: CCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAA...TGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGGGCATCCAGGAGGTCTaGCTGTCCATCAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQGIQEV*LSISQH
Trigger: GTGCTGACTGATGGACAGCCAGACCTCCTGGATGCC...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACAAGGAGCTGCAGGCCCTaGGCATCCAGGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTRSCRP*ASRRSG
Trigger: GCCAGACCTCCTGGATGCCCAGGGCCTGCAGCTCCT...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCCTAGGAGCTGCAGGCCCTaGGCATCCAGGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: CSDQPLAIQTAPRPLSLPRSCRP*ASRRSG
Trigger: GCCAGACCTCCTGGATGCCCAGGGCCTGCAGCTCCT...AGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CCA 90 bp GTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCATTCTGGGTCAGCGTaGCCACTAGGAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VRAVWGRFEIFLPHPGSLHSGSA*PLGAAG
Trigger: GCCTGCAGCTCCTAGTGGCCACGCTGACCCAGAATG...GAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGCATGGTTGTGGGCATaGCCAAAGGGCACACGGATG +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRAWLWA*PKGTRM
Trigger: CATCCGTGTGCCCTTTGGCCATGCCCACAACCATGC...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCAAAGGGCACACGGATGTCGTCATCGAAGGTCATGACACGCAGGGCCCAGCAGAGGTCGACGACCTCCTaGCAGAACTCGTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: PKGTRMSSSKVMTRRAQQRSTTS*QNSLRM
Trigger: CATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCT...CTGCTGGGCCCTGCGTGTCATGACCTTCGATGACGACATCCGTGTGCCCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGTGGTCCCTCATCTGGTaGTCATTGCAGTCGGCTAGC +
Preference number: 4 (lower is better)
Translates to: STPIPESHDSPRVTAQTGWSLIW*SLQSAS
Trigger: GCTAGCCGACTGCAATGACCACCAGATGAGGGACCA...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
CDS-3UTR CCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCCTCTGGTCCCTCATCTaGTGGTCATTGCAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPLWSLI*WSLQSA
Trigger: AGCCGACTGCAATGACCACCAGATGAGGGACCAGAG...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
CDS-3UTR CCA 90 bp ATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCCTGGTCACCCTCTGGTCCCTCATCTaGTGGTCATTGCAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: ISQHRQGIEGLEQKALVTLWSLI*WSLQSA
Trigger: AGCCGACTGCAATGACCACCAGATGAGGGACCAGAG...GGTGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp CTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACTCTGGTCCCTCATCTaGTGGTCATTGCAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: LSCLHRLDSTEAGGLPESLWSLI*WSLQSA
Trigger: AGCCGACTGCAATGACCACCAGATGAGGGACCAGAG...TGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGCGTCGTTGCCTGCGATaGCTCGCAGGGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKRRCLR*LAGCSA
Trigger: TGCTGAGCACCCTGCGAGCCATCGCAGGCAACGACG...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGGCTGGTCAGATGCTaGGTCATAGCAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRGLVRC*VIAATM
Trigger: CATCGTGGCTGCTATGACCCAGCATCTGACCAGCCC...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGGGGCTGGTCAGATGCTaGGTCATAGCAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQGLVRC*VIAATM
Trigger: CATCGTGGCTGCTATGACCCAGCATCTGACCAGCCC...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGCTCTGCTCACACACCTaGGGGCTGGTCAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: RAVWGRFEIFLPHPGSLQLCSHT*GLVRCW
Trigger: CCAGCATCTGACCAGCCCCCAGGTGTGTGAGCAGAG...CTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGAGAAGGCCTGGCCGTaGGCCACCAGGTTTCGGATC +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKEKAWP*ATRFRI
Trigger: GATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTC...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACACCCCCAGGTCCAGGATaGGCTTCGAGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTPPGPG*ASRRPG
Trigger: GCCAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGG...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCTCCTCACAGTCACGGTaGGCAGATCGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: VRAVWGRFEIFLPHPGSLSSQSR*ADRACM
Trigger: CATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGA...GAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CCA 90 bp AGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGTCCTCACAGTCACGGTaGGCAGATCGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: RAVWGRFEIFLPHPGSLQSSQSR*ADRACM
Trigger: CATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGA...CTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACAGCCAGGTTGCCCCTCTaGCCTGTCCACAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTARLPL*PVHSSR
Trigger: CCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGC...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTACTAATGGGGGACAGTaGAGGACATGGATCTACCCC +
Preference number: 4 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLTNGGQ*RTWIYP
Trigger: GGGGTAGATCCATGTCCTCCACTGTCCCCCATTAGT...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGACTAATGGGGGACAGTaGAGGACATGGATCTACCCC +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLTNGGQ*RTWIYP
Trigger: GGGGTAGATCCATGTCCTCCACTGTCCCCCATTAGT...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGAGAAGTGGCTGGGACATaGGGGCTGCTTTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGEVAGT*GLLSSV
Trigger: CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTC...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCGAGCCTGGCCCACAGTaGCTGCCACATTTCAGACAG +
Preference number: 4 (lower is better)
Translates to: SGWDMGAAFFCVEASLQGEPGPQ*LPHFRQ
Trigger: CTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTC...GCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGCAGAGACAGACAAGCTaGGGCCAAGCAGGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKQRQTS*GQAGRS
Trigger: GCTCCGCCCTGCTTGGCCCCAGCTTGTCTGTCTCTG...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCATCAGGTATCCTGGCTaGCCCAGGACCCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: SGWDMGAAFFCVEASLQGIRYPG*PRTQRQ
Trigger: CTGTCTCTGGGTCCTGGGCCAGCCAGGATACCTGAT...GCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp GTCATGTGTGGGCTCCTGGGATCCGTCTGCAGAGACTTTAGGTGCCGTCTTTACTGGTGGCCTGCACTTTaGGAGGCCGAGGCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VMCGLLGSVCRDFRCRLYWWPAL*EAEAEG
Trigger: TCCTTCCGCCTCGGCCTCCCAAAGTGCAGGCCACCA...GTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACACATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CCA 90 bp AAGGGAAGGGCACTTCTAGGCAGAGGGCATGGCTTGTCACATGGGGGCTTGTGCGAAATGGGCAAGGCCTaGGCCATACTGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KGRALLGRGHGLSHGGLCEMGKA*AILGLQ
Trigger: CTGCAGACCCAGTATGGCCCAGGCCTTGCCCATTTC...GCACAAGCCCCCATGTGACAAGCCATGCCCTCTGCCTAGAAGTGCCCTTCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp TGGAGCAGGAATGACAGGGCCAGCACTGCAGGCCGTCCTCGAAATAGCTCAGGACTTGTGCAAAGGCCCTaGGGTGGGGGAATAGGGAGT +
Preference number: 4 (lower is better)
Translates to: WSRNDRASTAGRPRNSSGLVQRP*GGGIGS
Trigger: ACTCCCTATTCCCCCACCCCAGGGCCTTTGCACAAG...TCCTGAGCTATTTCGAGGACGGCCTGCAGTGCTGGCCCTGTCATTCCTGCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGAATGCAAGCCTGTTTCTaGGGGCTGGTCAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGMQACF*GLVRCW
Trigger: CCAGCATCTGACCAGCCCCCAGAAACAGGCTTGCAT...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535478.5
CDS-3UTR TCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGACATCTTCGCCTGTGTTaGTGTTGGCGTGCAGCCGAT +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRHLRLC*CWRAAD
Trigger: ATCGGCTGCACGCCAACATCAACACAGGCGAAGATG...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp CCACGGCCTCTTTCACTGCCTCCTCTGGCCCCATCGCAAACTCCTCGATGTTCTCATCTTCGCCTGTGTTaGTGTTGGCGTGCAGCCGAT +
Preference number: 4 (lower is better)
Translates to: PRPLSLPPLAPSQTPRCSHLRLC*CWRAAD
Trigger: ATCGGCTGCACGCCAACATCAACACAGGCGAAGATG...AGAACATCGAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR TCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGGCGGGTGAGGTATGCTaGCACCTCCTGGGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKEAGEVC*HLLGAR
Trigger: TCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGC...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR TCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGTGTTTCAGGCAAGCGTaGCGCACACAGCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRCFRQA*RTQRIP
Trigger: TGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACA...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCCCAGCAGGCTTCCCTaGCCACGTCAGTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKEPSRLP*PRQCGG
Trigger: GCCACCACACTGACGTGGTCAGGGAAGCCTGCTGGG...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR TCA 90 bp AAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGCCCAGCAGGCTTCCCTaGCCACGTCAGTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KLSQGSLGQIRDLSPTSWPSRLP*PRQCGG
Trigger: GCCACCACACTGACGTGGTCAGGGAAGCCTGCTGGG...CCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR TCA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTTTGGTGGCTTCGATaGGCACCTTCAAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGLWWLR*APSSLC
Trigger: ACAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAAG...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGCTTTGGTGGCTTCGATaGGCACCTTCAAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVLWWLR*APSSLC
Trigger: ACAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAAG...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp GCGGGACAGGGTTCCACAGAGCTCGCTCAGGATGCCAGGGTTATCCAGGAACGCCTTTGGTGGCTTCGATaGGCACCTTCAAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: AGQGSTELAQDARVIQERLWWLR*APSSLC
Trigger: ACAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAAG...GCGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCTGTGGAACCCTGTCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR TCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAATCTACCCCCATTCCTaGGTCACACGACTCACCCAG +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRIYPHS*VTRLTQ
Trigger: CTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGAT...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTATCTACCCCCATTCCTaGGTCACACGACTCACCCAG +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPIYPHS*VTRLTQ
Trigger: CTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGAT...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGAGACAGGGCAGTGAGTaGTGGGACGTGCCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKRQGSE*WDVPFA
Trigger: GGCAAAGGGCACGTCCCATCACTCACTGCCCTGTCT...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp CTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCCAGAGTCAAGTTCACAAATGAGGTaGCCTCAGATGGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLSCLHRLDSTEAGGPESSSQMR*PQMGPS
Trigger: ACTGGGCCCCATCTGAGGTCACCTCATTTGTGAACT...TGACTCTGGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR TCA 90 bp GCGGGACAGGGTTCCACAGAGCTCGCTCAGGATGCCAGGGTTATCCAGGAACGCACTCCTGGAGGTCACTaGGCATCTTGCGATTCAAAC +
Preference number: 4 (lower is better)
Translates to: AGQGSTELAQDARVIQERTPGGH*ASCDSN
Trigger: GTTTGAATCGCAAGATGCTCAGTGACCTCCAGGAGT...GCGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCTGTGGAACCCTGTCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR GCA 90 bp AGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGACGACGGAGGCGTCTTTaGCGCCCCTTCCGGGACGCT +
Preference number: 4 (lower is better)
Translates to: SRAEHLRPILQVRKTRSRRRRRL*RPFRDA
Trigger: AGCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCG...TCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp AGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCAGGTCTCCTGGGCAATaGGCTTGGAGACCATCTTCG +
Preference number: 4 (lower is better)
Translates to: SGWDMGAAFFCVEASLQGRSPGQ*AWRPSS
Trigger: CGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCT...GCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTAGGTCTCCTGGGCAATaGGCTTGGAGACCATCTTCG +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPRSPGQ*AWRPSS
Trigger: CGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCT...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp TTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCCCACGGCCTCTTTCACTaGCTCCTCTGGCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: LLRSTPCDSNCSTASFTAHGLFH*LLWPHR
Trigger: GCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTG...GGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR GCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGCTCAGATCAACCCCTTaGGATTCAAACTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVLRSTP*DSNCST
Trigger: CGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAG...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTCTCCTGGGATCCGTCTaGAGAGACTTTAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPLLGSV*RDFRCR
Trigger: ACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAG...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCAGGTCACTGAGCATCTaGAGGATGTCATGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPRSLSI*RMSCVG
Trigger: GCCCACACATGACATCCTGCAGATGCTCAGTGACCT...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp GCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAAGGCCTTGTCCTGTTTaGACTGGTCGCAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: AVWGRFEIFLPHPGSLQGRPCPV*TGRRSG
Trigger: CCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCT...TCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp AGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCAGAGCTCGCTCAGGATaGCAGGGTTATCCAGGAACG +
Preference number: 4 (lower is better)
Translates to: SGWDMGAAFFCVEASLQGRARSG*QGYPGT
Trigger: CGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCT...GCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTAGAGCTCGCTCAGGATaGCAGGGTTATCCAGGAACG +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPRARSG*QGYPGT
Trigger: CGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCT...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACAGGCCTTCTGCGGGTGTaGCTTCATGGCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTGLLRV*LHGLQC
Trigger: GCACTGCAGGCCATGAAGGCACACCCGCAGAAGGCC...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTTGCACGCCGGCCTTCTaGGGGTGTGCCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPCTPAF*GCAFMA
Trigger: GGCCATGAAGGCACACCCGCAGAAGGCCGGCGTGCA...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGACTGGGACATGGGGGCTaGTTTCTTCTGTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRLGHGG*FLLCRG
Trigger: GCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAG...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp AGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCCTGGGACATGGGGGCTaGTTTCTTCTGTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: SGWDMGAAFFCVEASLQGLGHGG*FLLCRG
Trigger: GCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAG...GCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCACGCTCCTCAGCTGTTTaGATCGGCTGGATTCCACGG +
Preference number: 4 (lower is better)
Translates to: QGSLGQIRDLSPTSWESPRSSAV*IGWIPR
Trigger: CCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCG...TGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR GCA 90 bp CCCTCTGGCCTGTCCACAGCTCTCGGAGCTCGACATGACAACCCAGGTCCCGCAGGTTTCGGATCAGCATaGAAGCCTGTTTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: PSGLSTALGARHDNPGPAGFGSA*KPVSAH
Trigger: ATGTGCAGAAACAGGCTTGCATGCTGATCCGAAACC...TGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGACAGGCCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CCA 90 bp CACGGCCTCTTTCACTGCCTCCTCTGGCCCCATCGCAAACTCCTCGATGTTCTCTTTCACTGCCTCCTCTaGCCCCATCGCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: HGLFHCLLWPHRKLLDVLFHCLL*PHRKLL
Trigger: GAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAA...GAGAACATCGAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp AGGTCACTGAGCATCTGCAGGATGTCATGTGTGGGCTCCTGGGATCCGTCTGCACTGGCCACAGACTCCTaGAGGTCACTGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: RSLSICRMSCVGSWDPSALATDS*RSLSIC
Trigger: GCAGATGCTCAGTGACCTCCAGGAGTCTGTGGCCAG...TGCAGACGGATCCCAGGAGCCCACACATGACATCCTGCAGATGCTCAGTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCCTGGGGGCGAGAGCTaGCCACAGACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKEPGGES*PQTPGG
Trigger: ACCTCCAGGAGTCTGTGGCCAGCTCTCGCCCCCAGG...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp AAGACAAGGAGCAGAGGCCTGCATGAAACTGCAGTAAGCAGCAGGCGCCAGGGGTTGTCCTGTTTGCACTaGTCGCAGAAGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KTRSRGLHETAVSSRRQGLSCLH*SQKRVR
Trigger: CCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAA...CCCCTGGCGCCTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTCCTTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTATTGTCCTGTTTGCACTaGTCGCAGAAGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLLSCLH*SQKRVR
Trigger: CCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAA...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TCCTGGAGGTCACTGAGCATCTGCAGGATGTCATGTGTGGGCTCCTGGGATCCGTTGTCCTGTTTGCACTaGTCGCAGAAGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SWRSLSICRMSCVGSWDPLSCLH*SQKRVR
Trigger: CCTCACCCGCTTCTGCGACCAGTGCAAACAGGACAA...CGGATCCCAGGAGCCCACACATGACATCCTGCAGATGCTCAGTGACCTCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp GCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAAGGGCATTGAGGGACTaGAGCAGAAGGCCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: AVWGRFEIFLPHPGSLQGRALRD*SRRPWS
Trigger: TGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCT...TCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp AGCTTTCACCAGGTCTTGCCGATTCTGTTCATGTTTCAGGCAAGCGTGACGCACAGGAGCTGCAGGCCCTaGGCATCCAGGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SFHQVLPILFMFQASVTHRSCRP*ASRRSG
Trigger: GCCAGACCTCCTGGATGCCCAGGGCCTGCAGCTCCT...GTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAAGACCTGGTGAAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGCATTCTGGGTCAGCGTaGCCACTAGGAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKHSGSA*PLGAAG
Trigger: GCCTGCAGCTCCTAGTGGCCACGCTGACCCAGAATG...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TGGCATGGTTGTGGGCATGGCCAAAGGGCACACGGATGTCGTCATCGAAGGTCAGCATGGTTGTGGGCATaGCCAAAGGGCACACGGATG +
Preference number: 4 (lower is better)
Translates to: WHGCGHGQRAHGCRHRRSAWLWA*PKGTRM
Trigger: CATCCGTGTGCCCTTTGGCCATGCCCACAACCATGC...TGACCTTCGATGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp GGAAGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGATCTTGGCATGGTTGTaGGCATGGCCAAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: GRSRTVTSVLLAGTQKWLILAWL*AWPKGT
Trigger: TGTGCCCTTTGGCCATGCCCACAACCATGCCAAGAT...CAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGAATCTTGGCATGGTTGTaGGCATGGCCAAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGILAWL*AWPKGT
Trigger: TGTGCCCTTTGGCCATGCCCACAACCATGCCAAGAT...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACATCTTGGCATGGTTGTaGGCATGGCCAAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: SAVCIGWIPRKLGACQSHILAWL*AWPKGT
Trigger: TGTGCCCTTTGGCCATGCCCACAACCATGCCAAGAT...GTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCACAATCATCTTGGCATaGTTGTGGGCATGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFTIILA*LWAWPK
Trigger: CTTTGGCCATGCCCACAACCATGCCAAGATGATTGT...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGACAATCATCTTGGCATaGTTGTGGGCATGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLTIILA*LWAWPK
Trigger: CTTTGGCCATGCCCACAACCATGCCAAGATGATTGT...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACCCTGCACAATCATCTTaGCATGGTTGTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: SAVCIGWIPRKLGACQSHPAQSS*HGCGHG
Trigger: GCCATGCCCACAACCATGCCAAGATGATTGTGCAGG...GTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGTGGTCCCTCATCTGGTaGTCATTGCAGTCGGCTAGC +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQWSLIW*SLQSAS
Trigger: GCTAGCCGACTGCAATGACCACCAGATGAGGGACCA...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
CDS-3UTR CCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTCTCTGGTCCCTCATCTaGTGGTCATTGCAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPLWSLI*WSLQSA
Trigger: AGCCGACTGCAATGACCACCAGATGAGGGACCAGAG...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACACGTCGTTGCCTGCGATaGCTCGCAGGGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTRRCLR*LAGCSA
Trigger: TGCTGAGCACCCTGCGAGCCATCGCAGGCAACGACG...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGGGGCTGGTCAGATGCTaGGTCATAGCAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRGLVRC*VIAATM
Trigger: CATCGTGGCTGCTATGACCCAGCATCTGACCAGCCC...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGGCTGGTCAGATGCTaGGTCATAGCAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: AVWGRFEIFLPHPGSLQGGLVRC*VIAATM
Trigger: CATCGTGGCTGCTATGACCCAGCATCTGACCAGCCC...TCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACAGAGAAGGCCTGGCCGTaGGCCACCAGGTTTCGGATC +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTEKAWP*ATRFRI
Trigger: GATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTC...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AAGTTGCTGGGACCACAGACAGGTTTGGTTTTATGTAGAAGGCAAAGGGGAGCCAGTCACGGCCCAGACTaGGCCTGGGGTCATGGCGCC +
Preference number: 4 (lower is better)
Translates to: KLLGPQTGLVLCRRQRGASHGPD*AWGHGA
Trigger: GGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACT...GGCTCCCCTTTGCCTTCTACATAAAACCAAACCTGTCTGTGGTCCCAGCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGGAAGTGGCTGGGACATaGGGGCTGCTTTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQEVAGT*GLLSSV
Trigger: CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTC...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGATCAGGTATCCTGGCTaGCCCAGGACCCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRIRYPG*PRTQRQ
Trigger: CTGTCTCTGGGTCCTGGGCCAGCCAGGATACCTGAT...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp GGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGAGGGATAATAGGGCGGGGTGACTaGGTCAGAGGTTTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GRFEIFLPHPGSLQGGGIIGRGD*VRGLGQ
Trigger: CTGGCCCAAACCTCTGACCCAGTCACCCCGCCCTAT...TATCCCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CCA 90 bp AAGGGAAGGGCACTTCTAGGCAGAGGGCATGGCTTGTCACATGGGGGCTTGTGCTCTAGGCAGAGGGCATaGCTTGTCACATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: KGRALLGRGHGLSHGGLCSRQRA*LVTWGL
Trigger: AAGCCCCCATGTGACAAGCCATGCCCTCTGCCTAGA...GCACAAGCCCCCATGTGACAAGCCATGCCCTCTGCCTAGAAGTGCCCTTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp GGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGAGGGATACTGGCCACAGACTCCTaGAGGTCACTGAGCATCCGG +
Preference number: 4 (lower is better)
Translates to: GRFEIFLPHPGSLQGGGILATDS*RSLSIR
Trigger: CCGGATGCTCAGTGACCTCCAGGAGTCTGTGGCCAG...TATCCCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR TCA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAACTCCTGGAGGTCACTaGGCATCTGCAGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRTPGGH*ASAGCH
Trigger: ATGACATCCTGCAGATGCTCAGTGACCTCCAGGAGT...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp CACAATCATCTTGGCATGGTTGTGGGCATGGCCAAAGGGCACACGGATGTCGTCTCAGTGTGGTGGCCATaGTGGGTGATGGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: HNHLGMVVGMAKGHTDVVSVWWP*WVMAPV
Trigger: GACTGGTGCCATCACCCATCATGGCCACCACACTGA...GACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR TCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGATCTACCCCCATTCCTaGGTCACACGACTCACCCAG +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRIYPHS*VTRLTQ
Trigger: CTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGAT...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGTTTCAGACAGGGCAGTaGGTGATGGGACGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRFQTGQ*VMGRAL
Trigger: AAGGGCACGTCCCATCACTCACTGCCCTGTCTGAAA...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGAACGAGGCCACCTCGTaGGCGACGGAGGCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKENEATS*ATEASL
Trigger: CAAAGACGCCTCCGTCGCGCACGAGGTGGCCTCGTT...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTCACGGCCTCTTTCACTaGCTCCTCTGGCCCCATCGC +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPHGLFH*LLWPHR
Trigger: GCGATGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTG...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp AGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACCTTGCGATTCAAACTaGTCCACGGCCTCTTTCACT +
Preference number: 4 (lower is better)
Translates to: RSRTVTSVLLAGTQKWLGPCDSN*STASFT
Trigger: AGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGG...TCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCCCGTCTTTACAATGTTaGTCAGATCAACCCCTTGCG +
Preference number: 4 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGPSLQC*SDQPLA
Trigger: CGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGG...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTAAGGTCACTGAGCATCTaGAGGATGTCATGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLRSLSI*RMSCVG
Trigger: GCCCACACATGACATCCTGCAGATGCTCAGTGACCT...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp TTCCCTGACCACGTCAGTGTGGTGGCCATGATGGGTGATGGCACCAGTCAGCAGAGGTCACTGAGCATCTaGAGGATGTCATGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FPDHVSVVAMMGDGTSQQRSLSI*RMSCVG
Trigger: GCCCACACATGACATCCTGCAGATGCTCAGTGACCT...CTGCTGACTGGTGCCATCACCCATCATGGCCACCACACTGACGTGGTCAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR GCA 90 bp TCATCTTGGCATGGTTGTGGGCATGGCCAAAGGGCACACGGATGTCGTCATCGAAGGCCTTGTCCTGTTTaGACTGGTCGCAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: SSWHGCGHGQRAHGCRHRRPCPV*TGRRSG
Trigger: CCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCT...TCGATGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR GCA 90 bp CAATGTTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCAGTGGCCACTAGGAGCTaGAGGCCCTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: QCCSDQPLAIQTAPRPLSVATRS*RPWASR
Trigger: CCTGGATGCCCAGGGCCTGCAGCTCCTAGTGGCCAC...TGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR GCA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGCTTTCACCAGGTCTTaGCGATTCTGTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLAFTRS*RFCSCF
Trigger: GAAACATGAACAGAATCGGCAAGACCTGGTGAAAGC...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACACCTGGCAGAACTCGTTaGGAATGGCCAGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTPGRTR*EWPGGT
Trigger: TGTCCCGCCTGGCCATTCGCAACGAGTTCTGCCAGG...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGGCAGGGACACCAGAATaGTCAGGCCCCCGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKEAGTPE*SGPRGR
Trigger: TCGACCTCGGGGGCCTGAGCATTCTGGTGTCCCTGC...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp AAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGCAGGGACACCAGAATaGTCAGGCCCCCGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: KLSQGSLGQIRDLSPTSWAGTPE*SGPRGR
Trigger: TCGACCTCGGGGGCCTGAGCATTCTGGTGTCCCTGC...CCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACACTTTCACGTCGTCGTTaGCTGCGATGGCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTLSRRR*LRWLAG
Trigger: CCCTGCGAGCCATCGCAGGCAACGACGACGTGAAAG...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGTGTGCCTTCATGGCCTaGAGTGCTGCCACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKECAFMA*SAATAP
Trigger: CGGGGCTGTGGCAGCACTGCAGGCCATGAAGGCACA...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTGGTTTCGGATCAGCATaGAAGCCTGTTTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPGFGSA*KPVSAR
Trigger: GCGTGCAGAAACAGGCTTGCATGCTGATCCGAAACC...AGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGGGCCTGCATGATGAGTaGCTCAGCCCCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKEGLHDE*LSPQVQ
Trigger: CTGGACCTGGGGGCTGAGGCACTCATCATGCAGGCC...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGCCTTTACCTAGGGCCTaGCAGAAAACACTTCTCATT +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGPLPRA*QKTLLI
Trigger: AATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGG...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp AGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCATGCAAGCCTGTTTCTaGACATCCCACACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SGWDMGAAFFCVEASLQGMQACF*TSHTSL
Trigger: CAGGCTGGTGTGGGATGTGCAGAAACAGGCTTGCAT...GCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CCA 90 bp AGGTCTCCTGGGCAATGCGCTTGGAGACCATCTTCGCCTGTGTTGATGTTGGCGGCATCAAAGGTCTCCTaGGCAATGCGCTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: RSPGQCAWRPSSPVLMLAASKVS*AMRLET
Trigger: GGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGC...CGCCAACATCAACACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGTCATGTGTGGGCTCCTaGGATCCGTCTGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRSCVGS*DPSAET
Trigger: AGTCTCTGCAGACGGATCCCAGGAGCCCACACATGA...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TTCTCCTGCACAATCATCTTGGCATGGTTGTGGGCATGGCCAAAGGGCACACGGGGCATCCAGGAGGTCTaGCTGTCCATCAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: FSCTIILAWLWAWPKGTRGIQEV*LSISQH
Trigger: GTGCTGACTGATGGACAGCCAGACCTCCTGGATGCC...CCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp AGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAAGGAGCTGCAGGCCCTaGGCATCCAGGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SRAEHLRPILQVRKTRSRRSCRP*ASRRSG
Trigger: GCCAGACCTCCTGGATGCCCAGGGCCTGCAGCTCCT...TCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGCCTCATCAGCATTCTaGGTCAGCGTGGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKASSAF*VSVATR
Trigger: CCTAGTGGCCACGCTGACCCAGAATGCTGATGAGGC...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp GTTCTCCTGCACAATCATCTTGGCATGGTTGTGGGCATGGCCAAAGGGCACACGGCCTCATCAGCATTCTaGGTCAGCGTGGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: VLLHNHLGMVVGMAKGHTASSAF*VSVATR
Trigger: CCTAGTGGCCACGCTGACCCAGAATGCTGATGAGGC...CGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp AAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCGCCTCATCAGCATTCTaGGTCAGCGTGGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: KSGQSGADSRSFSHILGVASSAF*VSVATR
Trigger: CCTAGTGGCCACGCTGACCCAGAATGCTGATGAGGC...GACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGCATGGTTGTGGGCATaGCCAAAGGGCACACGGATG +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKAWLWA*PKGTRM
Trigger: CATCCGTGTGCCCTTTGGCCATGCCCACAACCATGC...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACCTGCACAATCATCTTaGCATGGTTGTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLPAQSS*HGCGHG
Trigger: GCCATGCCCACAACCATGCCAAGATGATTGTGCAGG...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGTGGTCCCTCATCTGGTaGTCATTGCAGTCGGCTAGC +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTRWSLIW*SLQSAS
Trigger: GCTAGCCGACTGCAATGACCACCAGATGAGGGACCA...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
CDS-3UTR CCA 90 bp TCTTGGCATGGTTGTGGGCATGGCCAAAGGGCACACGGATGTCGTCATCGAAGGTGGTCCCTCATCTGGTaGTCATTGCAGTCGGCTAGC +
Preference number: 4 (lower is better)
Translates to: SWHGCGHGQRAHGCRHRRWSLIW*SLQSAS
Trigger: GCTAGCCGACTGCAATGACCACCAGATGAGGGACCA...CCTTCGATGACGACATCCGTGTGCCCTTTGGCCATGCCCACAACCATGCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACACTCTGCTCACACACCTaGGGGCTGGTCAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTLCSHT*GLVRCW
Trigger: CCAGCATCTGACCAGCCCCCAGGTGTGTGAGCAGAG...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGGAGAAGGCCTGGCCGTaGGCCACCAGGTTTCGGATC +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKEEKAWP*ATRFRI
Trigger: GATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTC...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GAAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGAGAAGGCCTGGCCGTaGGCCACCAGGTTTCGGATC +
Preference number: 4 (lower is better)
Translates to: EVKSGQSGADSRSFSHILEKAWP*ATRFRI
Trigger: GATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTC...CAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTGGCTTCGAGAAGGCCTaGCCGTGGGCCACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPGFEKA*PWATRF
Trigger: AAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCC...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGGGCTTCGAGAAGGCCTaGCCGTGGGCCACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKEGFEKA*PWATRF
Trigger: AAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCC...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTAATGGGGGACAGTaGAGGACATGGATCTACCCC +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQTNGGQ*RTWIYP
Trigger: GGGGTAGATCCATGTCCTCCACTGTCCCCCATTAGT...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGGAAGTGGCTGGGACATaGGGGCTGCTTTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: KWLGHGGCFLLCRGLPTREVAGT*GLLSSV
Trigger: CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTC...CCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AGCCAGCCGATGGTGGGGGCAAGACAAACAGGAGAGTTCACAAATGAGGTGACCCTTTCTCCCACATCCTaGGAGTCTCCAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SQPMVGARQTGEFTNEVTLSPTS*ESPGRR
Trigger: CCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAG...GGTCACCTCATTTGTGAACTCTCCTGTTTGTCTTGCCCCCACCATCGGCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp AAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCCTTTCTCCCACATCCTaGGAGTCTCCAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KSGQSGADSRSFSHILGVLSPTS*ESPGRR
Trigger: CCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAG...GACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
3UTR CAA 72 bp CGCACAGCTGCATCAAAGGTCTCCTGGGCAATGCGCTaGGAGACCATCTTCGCCTGTGTTGATGTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: RTAASKVSWAMR*ETIFACVDVGV
Trigger: CACGCCAACATCAACACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR TCA 90 bp GTTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCTCAGTGTGGTGGCCATaGTGGGTGATGGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: VAQINPLRFKLLHGLFHCSVWWP*WVMAPV
Trigger: GACTGGTGCCATCACCCATCATGGCCACCACACTGA...GCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR TCA 90 bp AGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGATCTCGGAGCTCGACATaGCAACCCAGGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SRAEHLRPILQVRKTRSRSRSST*QPRSRR
Trigger: CCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGA...TCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTAGACAGGGCAGTGAGTaGTGGGACGTGCCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPRQGSE*WDVPFA
Trigger: GGCAAAGGGCACGTCCCATCACTCACTGCCCTGTCT...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp CAGACAGGTTTGGTTTTATGTAGAAGGCAAAGGGGAGCCATGGGCAGACTGAGAAGGCTGGAGCAGGAATaGCAGGGCCAGCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: QTGLVLCRRQRGAMGRLRRLEQE*QGQHCR
Trigger: CCTGCAGTGCTGGCCCTGTCATTCCTGCTCCAGCCT...TCTCAGTCTGCCCATGGCTCCCCTTTGCCTTCTACATAAAACCAAACCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR TCA 90 bp CTGGGGCCACCTGGCAGGGACCTCGAGTGCTTGTCAGTTTATTCAGGTGAACACAGGAGAGTTCACAAATaGGGTGACCTCAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: LGPPGRDLECLSVYSGEHRRVHK*GDLRWG
Trigger: GCCCCATCTGAGGTCACCTCATTTGTGAACTCTCCT...GTGTTCACCTGAATAAACTGACAAGCACTCGAGGTCCCTGCCAGGTGGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp AGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTAGCAGGGAAATGTTTTaGCTCCAGAGCGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SQGSLGQIRDLSPTSWESSREMF*LQSVRP
Trigger: TGGGCGGACGCTCTGGAGGCAAAACATTTCCCTGCT...AGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp TGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCCTGTTCTCGCGCACAGCTaGATCAAAGGTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CSDQPLAIQTAPRPLSLPVLAHS*IKGLLG
Trigger: GCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAAC...AGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR GCA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACCTTGCGATTCAAACTaGTCCACGGCCTCTTTCACT +
Preference number: 4 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLPCDSN*STASFT
Trigger: AGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGG...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp AGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCCTCAGATCAACCCCTTaGGATTCAAACTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: SGWDMGAAFFCVEASLQGLRSTP*DSNCST
Trigger: CGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAG...GCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGCTCAGATCAACCCCTTaGGATTCAAACTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQLRSTP*DSNCST
Trigger: CGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAG...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CCTCTTTCACTGCCTCCTCTGGCCCCATCGCAAACTCCTCGATGTTCTCGCGCACTCAGATCAACCCCTTaGGATTCAAACTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: PLSLPPLAPSQTPRCSRALRSTP*DSNCST
Trigger: CGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAG...TGCGCGAGAACATCGAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR GCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGCTCCTGGGATCCGTCTaGAGAGACTTTAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKLLGSV*RDFRCR
Trigger: ACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAG...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp GAGCATCTGCAGGATGTCATGTGTGGGCTCCTGGGATCCGTCTGCAGAGACTTTCTCCTGGGATCCGTCTaGAGAGACTTTAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: EHLQDVMCGLLGSVCRDFLLGSV*RDFRCR
Trigger: ACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAG...AAAGTCTCTGCAGACGGATCCCAGGAGCCCACACATGACATCCTGCAGATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR GCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGGCTTTCACCAGGTCTTaGCGATTCTGTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLAFTRS*RFCSCF
Trigger: GAAACATGAACAGAATCGGCAAGACCTGGTGAAAGC...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGGCTTTCACCAGGTCTTaGCGATTCTGTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGAFTRS*RFCSCF
Trigger: GAAACATGAACAGAATCGGCAAGACCTGGTGAAAGC...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTTGGGGGCTGGTCAGATaGTGGGTCATAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPWGLVR*WVIAAT
Trigger: CGTGGCTGCTATGACCCAGCATCTGACCAGCCCCCA...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGTGGGGGCTGGTCAGATaGTGGGTCATAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKEWGLVR*WVIAAT
Trigger: CGTGGCTGCTATGACCCAGCATCTGACCAGCCCCCA...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGCCTTTACCTAGGGCCTaGCAGAAAACACTTCTCATT +
Preference number: 4 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVPLPRA*QKTLLI
Trigger: AATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGG...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp GGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGAGGGATGAAATGCTTGAGAACTaGCCAAGGTCACACTGGCCC +
Preference number: 4 (lower is better)
Translates to: GQIRDLSPTSWESPGRRDEMLEN*PRSHWP
Trigger: GGGCCAGTGTGACCTTGGGCAGTTCTCAAGCATTTC...ATCCCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp AAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCCGCCTTAGCCCAAGTTaGTGGGACCACAGACAGGTT +
Preference number: 4 (lower is better)
Translates to: KSGQSGADSRSFSHILGVRLSPS*WDHRQV
Trigger: AACCTGTCTGTGGTCCCAGCAACTTGGGCTAAGGCG...GACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp CAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCCTCCTCTTTCACTGCCTCCTCTaGCCCCATCGCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: QINPLRFKLLHGLFHCLLFHCLL*PHRKLL
Trigger: GAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAA...GAGGAGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp CAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCCTCCTCTCATGTGTGGGCTCCTaGGATCCGTCTGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: QINPLRFKLLHGLFHCLLSCVGS*DPSAET
Trigger: AGTCTCTGCAGACGGATCCCAGGAGCCCACACATGA...GAGGAGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp TCATGTGTGGGCTCCTGGGATCCGTCTGCAGAGACTTTAGGTGCCGTCTTTACAGCAGGATGTCATGTGTaGGCTCCTGGGATCCGTCTG +
Preference number: 4 (lower is better)
Translates to: SCVGSWDPSAETLGAVFTAGCHV*APGIRL
Trigger: CAGACGGATCCCAGGAGCCCACACATGACATCCTGC...TGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTTATGCTGACACCTCCTaGGGGCGAGAGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPYADTS*GRELAT
Trigger: TGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATA...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp TTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCCAGGGCATTGAGGGACTaGAGCAGAAGGCCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LLRSTPCDSNCSTASFTARALRD*SRRPWS
Trigger: TGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCT...GGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTACAATCATCTTGGCATaGTTGTGGGCATGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCTIILA*LWAWPK
Trigger: CTTTGGCCATGCCCACAACCATGCCAAGATGATTGT...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp TCACCAGGTCTTGCCGATTCTGTTCATGTTTCAGGCAAGCGTGACGCACACAGCAGAACTCGTTGCGAATaGCCAGGCGGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SPGLADSVHVSGKRDAHSRTRCE*PGGTGF
Trigger: GAACCCTGTCCCGCCTGGCCATTCGCAACGAGTTCT...GCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAAGACCTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp AAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTGGTCCCTCATCTGGTaGTCATTGCAGTCGGCTAGC +
Preference number: 4 (lower is better)
Translates to: KSGQSGADSRSFSHILGVWSLIW*SLQSAS
Trigger: GCTAGCCGACTGCAATGACCACCAGATGAGGGACCA...GACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACAGGGCTGGTCAGATGCTaGGTCATAGCAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTGLVRC*VIAATM
Trigger: CATCGTGGCTGCTATGACCCAGCATCTGACCAGCCC...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTTCCTCACAGTCACGGTaGGCAGATCGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPSSQSR*ADRACM
Trigger: CATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGA...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp CCCCGCCACATGACAGATGAAGAAATGCTTGAGAACTGCCCAAGGTCACACTGGGCTGTTTGCATCGGCTaGATTCCACGGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PRHMTDEEMLENCPRSHWAVCIG*IPRKLG
Trigger: CCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGC...CCAGTGTGACCTTGGGCAGTTCTCAAGCATTTCTTCATCTGTCATGTGGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CCA 90 bp GCCCAGAAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACAGATGGGGGTCTCTCCTaGAGAAGGCAACGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: AQKLSQGSLGQIRDLSPTDGGLS*RRQREL
Trigger: CAGCTCACGTTGCCTTCTCCAGGAGAGACCCCCATC...TGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTTCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR TCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGACTCCTGGAGGTCACTaGGCATCTGCAGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKTPGGH*ASAGCH
Trigger: ATGACATCCTGCAGATGCTCAGTGACCTCCAGGAGT...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGTGTTTCAGGCAAGCGTaGCGCACACAGCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKECFRQA*RTQRIP
Trigger: TGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACA...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR TCA 90 bp AAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGTGTTTCAGGCAAGCGTaGCGCACACAGCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: KLSQGSLGQIRDLSPTSWCFRQA*RTQRIP
Trigger: TGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACA...CCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR TCA 90 bp TCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCCTTTGGTGGCTTCGATaGGCACCTTCAAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SGQSGADSRSFSHILGVSLWWLR*APSSLC
Trigger: ACAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAAG...GGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR TCA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGCCGCTGTTCACCCAATaGTCTTTTATTATCAGGTAT +
Preference number: 4 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGPLFTQ*SFIIRY
Trigger: ATACCTGATAATAAAAGATCATTGGGTGAACAGCGG...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392335.6
CDS-3UTR TCA 90 bp TCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCACCTACCCCGCCACATaGCAGATGAAGAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: SGQSGADSRSFSHILGVSTYPAT*QMKKCL
Trigger: CAAGCATTTCTTCATCTGTCATGTGGCGGGGTAGGT...GGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR TCA 90 bp GAAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGACTCCTGGGCTCAAGTaGTCTTCCCGCCTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: EVKSGQSGADSRSFSHILTPGLK*SSRLSP
Trigger: TGGGCTAAGGCGGGAAGATCACTTGAGCCCAGGAGT...CAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp CCTCTTTCACTGCCTCCTCTGGCCCCATCGCAAACTCCTCGATGTTCTCGCGCACCGTCTTTACAATGTTaGTCAGATCAACCCCTTGCG +
Preference number: 4 (lower is better)
Translates to: PLSLPPLAPSQTPRCSRAPSLQC*SDQPLA
Trigger: CGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGG...TGCGCGAGAACATCGAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR GCA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGTGCAGAGACTTTAGGTaGCGTCTTTACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLCRDFR*RLYNVA
Trigger: AGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCA...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp AGCAGAGGCAGCACGCCAGCTTTCACCAGGTCTTGCCGATTCTGTTCATGTTTCCTCCTGGGATCCGTCTaGAGAGACTTTAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: SRGSTPAFTRSCRFCSCFLLGSV*RDFRCR
Trigger: ACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAG...GAAACATGAACAGAATCGGCAAGACCTGGTGAAAGCTGGCGTGCTGCCTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR GCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGAGGCCTTGTCCTGTTTaGACTGGTCGCAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKERPCPV*TGRRSG
Trigger: CCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCT...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp CTGAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGCAGTGAGTGATGGGGCTTTCACCAGGTCTTaGCGATTCTGTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: LSLAHSGCHISDRAVSDGAFTRS*RFCSCF
Trigger: GAAACATGAACAGAATCGGCAAGACCTGGTGAAAGC...CCCATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp TGGCTGTCCATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCGCTTTCACCAGGTCTTaGCGATTCTGTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: WLSISQHRQGIEGLEQKAAFTRS*RFCSCF
Trigger: GAAACATGAACAGAATCGGCAAGACCTGGTGAAAGC...GGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGGACAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR GCA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCAAGCCTTTGTTCTCCTaGACAATCATCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPKPLFS*TIILAW
Trigger: CCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTT...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CGAGCTCCTGAACGCCGCTCTGGTCCCTCATCTGGTGGTCATTGCAGTCGGCTAAAGCCTTTGTTCTCCTaGACAATCATCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: RAPERRSGPSSGGHCSRLKPLFS*TIILAW
Trigger: CCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTT...TAGCCGACTGCAATGACCACCAGATGAGGGACCAGAGCGGCGTTCAGGAGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR GCA 90 bp TTGCCGATTCTGTTCATGTTTCAGGCAAGCGTGACGCACACAGCGGATCCCAGAAGAGCTCGCTCAGGATaGCAGGGTTATCCAGGAACG +
Preference number: 4 (lower is better)
Translates to: LPILFMFQASVTHTADPRRARSG*QGYPGT
Trigger: CGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCT...TCTGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR GCA 90 bp AAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGCGATGGCTCGCAGGGTaGTCAGCACTTGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: KLSQGSLGQIRDLSPTSWRWLAG*SALASR
Trigger: TCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATCG...CCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp AAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCGGTTTCGGATCAGCATaGAAGCCTGTTTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: KSGQSGADSRSFSHILGVGFGSA*KPVSAR
Trigger: GCGTGCAGAAACAGGCTTGCATGCTGATCCGAAACC...GACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR GCA 90 bp GGAAGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGCCTTTACCTAGGGCCTaGCAGAAAACACTTCTCATT +
Preference number: 4 (lower is better)
Translates to: GRSRTVTSVLLAGTQKWLPLPRA*QKTLLI
Trigger: AATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGG...CAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTCCTTTACCTAGGGCCTaGCAGAAAACACTTCTCATT +
Preference number: 4 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCPLPRA*QKTLLI
Trigger: AATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGG...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR GCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACACTGGGACATGGGGGCTaGTTTCTTCTGTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTLGHGG*FLLCRG
Trigger: GCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAG...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AGCAGAGGCAGCACGCCAGCTTTCACCAGGTCTTGCCGATTCTGTTCATGTTTCGCATCAAAGGTCTCCTaGGCAATGCGCTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: SRGSTPAFTRSCRFCSCFASKVS*AMRLET
Trigger: GGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGC...GAAACATGAACAGAATCGGCAAGACCTGGTGAAAGCTGGCGTGCTGCCTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp TTGCCGATTCTGTTCATGTTTCAGGCAAGCGTGACGCACACAGCGGATCCCAGATTTCACTGCCTCCTCTaGCCCCATCGCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LPILFMFQASVTHTADPRFHCLL*PHRKLL
Trigger: GAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAA...TCTGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGATCTTGGCATGGTTGTaGGCATGGCCAAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKILAWL*AWPKGT
Trigger: TGTGCCCTTTGGCCATGCCCACAACCATGCCAAGAT...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGCCTGCACAATCATCTTaGCATGGTTGTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKPAQSS*HGCGHG
Trigger: GCCATGCCCACAACCATGCCAAGATGATTGTGCAGG...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACAAGGTCGACGACCTCCTaGCAGAACTCGTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTRSTTS*QNSLRM
Trigger: CATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCT...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGGGGCTGGTCAGATGCTaGGTCATAGCAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKEGLVRC*VIAATM
Trigger: CATCGTGGCTGCTATGACCCAGCATCTGACCAGCCC...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp AGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGACTCTGCTCACACACCTaGGGGCTGGTCAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: SRAEHLRPILQVRKTRSRLCSHT*GLVRCW
Trigger: CCAGCATCTGACCAGCCCCCAGGTGTGTGAGCAGAG...TCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTGAGCCTGGCCCACAGTaGCTGCCACATTTCAGACAG +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPEPGPQ*LPHFRQ
Trigger: CTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTC...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACAACTCCTGGAGGTCACTaGGCATCTGCAGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTTPGGH*ASAGCH
Trigger: ATGACATCCTGCAGATGCTCAGTGACCTCCAGGAGT...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR TCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTTTTCAGACAGGGCAGTaGGTGATGGGACGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPFQTGQ*VMGRAL
Trigger: AAGGGCACGTCCCATCACTCACTGCCCTGTCTGAAA...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR TCA 90 bp AATGTTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACGGTAGGAGAACCACTTaGGCACAGAGGCGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: NVAQINPLRFKLLHGLFHGRRTT*AQRRRL
Trigger: CAACCTCCGCCTCTGTGCTCAAGTGGTTCTCCTACC...GTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535758.1
CDS-3UTR TCA 90 bp AAGTTGCTGGGACCACAGACAGGTTTGGTTTTATGTAGAAGGCAAAGGGGAGCCACACTGACGGGAAGCTaGAGGCACAGCAAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KLLGPQTGLVLCRRQRGATLTGS*RHSKWG
Trigger: TCCCCACTTGCTGTGCCTTCAGCTTCCCGTCAGTGT...GGCTCCCCTTTGCCTTCTACATAAAACCAAACCTGTCTGTGGTCCCAGCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGAGCAGGGAAATGTTTTaGCTCCAGAGCGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKESREMF*LQSVRP
Trigger: TGGGCGGACGCTCTGGAGGCAAAACATTTCCCTGCT...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp CTCCTGGGATCCGTCTGCAGAGACTTTAGGTGCCGTCTTTACAATGTTGCTCAGAGCAGGGAAATGTTTTaGCTCCAGAGCGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LLGSVCRDFRCRLYNVAQSREMF*LQSVRP
Trigger: TGGGCGGACGCTCTGGAGGCAAAACATTTCCCTGCT...CTGAGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR GCA 90 bp AGCTTTCACCAGGTCTTGCCGATTCTGTTCATGTTTCAGGCAAGCGTGACGCACAGGTCTCCTGGGCAATaGGCTTGGAGACCATCTTCG +
Preference number: 4 (lower is better)
Translates to: SFHQVLPILFMFQASVTHRSPGQ*AWRPSS
Trigger: CGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCT...GTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAAGACCTGGTGAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR GCA 90 bp CATCGCAAACTCCTCGATGTTCTCGCGCACAGCTGCATCAAAGGTCTCCTGGGCCCGTCTTTACAATGTTaGTCAGATCAACCCCTTGCG +
Preference number: 4 (lower is better)
Translates to: HRKLLDVLAHSCIKGLLGPSLQC*SDQPLA
Trigger: CGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGG...GCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAACATCGAGGAGTTTGCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR GCA 90 bp TGTGTGGGCTCCTGGGATCCGTCTGCAGAGACTTTAGGTGCCGTCTTTACAATGAGGTCACTGAGCATCTaGAGGATGTCATGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: CVGSWDPSAETLGAVFTMRSLSI*RMSCVG
Trigger: GCCCACACATGACATCCTGCAGATGCTCAGTGACCT...CATTGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR GCA 90 bp TTCCCTGACCACGTCAGTGTGGTGGCCATGATGGGTGATGGCACCAGTCAGCAGGCTTTCACCAGGTCTTaGCGATTCTGTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: FPDHVSVVAMMGDGTSQQAFTRS*RFCSCF
Trigger: GAAACATGAACAGAATCGGCAAGACCTGGTGAAAGC...CTGCTGACTGGTGCCATCACCCATCATGGCCACCACACTGACGTGGTCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR GCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTAGAGCTCGCTCAGGATaGCAGGGTTATCCAGGAACG +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPRARSG*QGYPGT
Trigger: CGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCT...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp AAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGAGAGCTCGCTCAGGATaGCAGGGTTATCCAGGAACG +
Preference number: 4 (lower is better)
Translates to: KLSQGSLGQIRDLSPTSWRARSG*QGYPGT
Trigger: CGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCT...CCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp GCTTTGGTGGCTTCGATGAGCACCTTCAAGCCTTTGTTCTCCTGCACAATCATCCGATGGCTCGCAGGGTaGTCAGCACTTGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: ALVASMSTFKPLFSCTIIRWLAG*SALASR
Trigger: TCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATCG...GATGATTGTGCAGGAGAACAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR GCA 90 bp TTTGGTGGCTTCGATGAGCACCTTCAAGCCTTTGTTCTCCTGCACAATCATCTTCACGTCGTCGTTGCCTaGGATGGCTCGCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FGGFDEHLQAFVLLHNHLHVVVA*DGSQGA
Trigger: AGCACCCTGCGAGCCATCGCAGGCAACGACGACGTG...AAGATGATTGTGCAGGAGAACAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR GCA 90 bp AGGGACCTCGAGTGCTTGTCAGTTTATTCAGGTGAACACTCAAAAACACTGACGGGCCTGCATGATGAGTaGCTCAGCCCCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RDLECLSVYSGEHSKTLTGLHDE*LSPQVQ
Trigger: CTGGACCTGGGGGCTGAGGCACTCATCATGCAGGCC...CGTCAGTGTTTTTGAGTGTTCACCTGAATAAACTGACAAGCACTCGAGGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp AAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCGGCAGGGACCTCGAGTaGTTGTCAGTTTATTCAGGT +
Preference number: 4 (lower is better)
Translates to: KSGQSGADSRSFSHILGVGRDLE*LSVYSG
Trigger: ACCTGAATAAACTGACAAGCACTCGAGGTCCCTGCC...GACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp TCCCTCATCTGGTGGTCATTGCAGTCGGCTAGCAGGGACACCAGAATGCTCAGGTCTTGCGATTCAAACTaGTCCACGGCCTCTTTCACT +
Preference number: 4 (lower is better)
Translates to: SLIWWSLQSASRDTRMLRSCDSN*STASFT
Trigger: AGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGA...CCTGAGCATTCTGGTGTCCCTGCTAGCCGACTGCAATGACCACCAGATGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp GTGCCGTCTTTACAATGTTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCATATGCTGACACCTCCTaGGGGCGAGAGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VPSLQCCSDQPLAIQTAPYADTS*GRELAT
Trigger: TGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATA...TGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp AGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAAGGGCATTGAGGGACTaGAGCAGAAGGCCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SRAEHLRPILQVRKTRSRRALRD*SRRPWS
Trigger: TGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCT...TCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp GTGCCGTCTTTACAATGTTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACATTCTGGGTCAGCGTaGCCACTAGGAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VPSLQCCSDQPLAIQTAPHSGSA*PLGAAG
Trigger: GCCTGCAGCTCCTAGTGGCCACGCTGACCCAGAATG...TGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CCA 90 bp TTGCCGATTCTGTTCATGTTTCAGGCAAGCGTGACGCACACAGCGGATCCCAGAATCTTGGCATGGTTGTaGGCATGGCCAAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: LPILFMFQASVTHTADPRILAWL*AWPKGT
Trigger: TGTGCCCTTTGGCCATGCCCACAACCATGCCAAGAT...TCTGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp AGCAGAGGCAGCACGCCAGCTTTCACCAGGTCTTGCCGATTCTGTTCATGTTTCCCTGCACAATCATCTTaGCATGGTTGTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: SRGSTPAFTRSCRFCSCFPAQSS*HGCGHG
Trigger: GCCATGCCCACAACCATGCCAAGATGATTGTGCAGG...GAAACATGAACAGAATCGGCAAGACCTGGTGAAAGCTGGCGTGCTGCCTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTAGGTCGACGACCTCCTaGCAGAACTCGTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPRSTTS*QNSLRM
Trigger: CATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCT...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp AAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGAGGTCGACGACCTCCTaGCAGAACTCGTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: KLSQGSLGQIRDLSPTSWRSTTS*QNSLRM
Trigger: CATTCGCAACGAGTTCTGCCAGGAGGTCGTCGACCT...CCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTCTCTGGTCCCTCATCTaGTGGTCATTGCAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPLWSLI*WSLQSA
Trigger: AGCCGACTGCAATGACCACCAGATGAGGGACCAGAG...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp AATGTTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACAGGTCTCCTGGGCAATaGGCTTGGAGACCATCTTCG +
Preference number: 4 (lower is better)
Translates to: NVAQINPLRFKLLHGLFHRSPGQ*AWRPSS
Trigger: CGAAGATGGTCTCCAAGCGCATTGCCCAGGAGACCT...GTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR GCA 90 bp TGCCGTCTTTACAATGTTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACGTTCTCGCGCACAGCTaGATCAAAGGTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CRLYNVAQINPLRFKLLHVLAHS*IKGLLG
Trigger: GCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAAC...GTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR GCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACACCTTGCGATTCAAACTaGTCCACGGCCTCTTTCACT +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTPCDSN*STASFT
Trigger: AGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGG...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp TTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCCACGGCCTCTTTCACTGCCCCTTGCGATTCAAACTaGTCCACGGCCTCTTTCACT +
Preference number: 4 (lower is better)
Translates to: LLRSTPCDSNCSTASFTAPCDSN*STASFT
Trigger: AGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGG...GGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR GCA 90 bp AGCAGAGGCAGCACGCCAGCTTTCACCAGGTCTTGCCGATTCTGTTCATGTTTCCCTTGCGATTCAAACTaGTCCACGGCCTCTTTCACT +
Preference number: 4 (lower is better)
Translates to: SRGSTPAFTRSCRFCSCFPCDSN*STASFT
Trigger: AGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGG...GAAACATGAACAGAATCGGCAAGACCTGGTGAAAGCTGGCGTGCTGCCTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR GCA 90 bp TCATGTGTGGGCTCCTGGGATCCGTCTGCAGAGACTTTAGGTGCCGTCTTTACACTCAGATCAACCCCTTaGGATTCAAACTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: SCVGSWDPSAETLGAVFTLRSTP*DSNCST
Trigger: CGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAG...TGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR GCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGCCGTCTTTACAATGTTaGTCAGATCAACCCCTTGCG +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKPSLQC*SDQPLA
Trigger: CGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGG...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGTGCAGAGACTTTAGGTaGCGTCTTTACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQCRDFR*RLYNVA
Trigger: AGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCA...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp AGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGACTCCTGGGATCCGTCTaGAGAGACTTTAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: SRAEHLRPILQVRKTRSRLLGSV*RDFRCR
Trigger: ACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAG...TCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp TGTTCACCCAATGATCTTTTATTATCAGGTATCCTGGCTGGCCCAGGACCCAGAAGGCCTTGTCCTGTTTaGACTGGTCGCAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: CSPNDLLLSGILAGPGPRRPCPV*TGRRSG
Trigger: CCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCT...TCTGGGTCCTGGGCCAGCCAGGATACCTGATAATAAAAGATCATTGGGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp TGTTCACCCAATGATCTTTTATTATCAGGTATCCTGGCTGGCCCAGGACCCAGACGATGGCTCGCAGGGTaGTCAGCACTTGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: CSPNDLLLSGILAGPGPRRWLAG*SALASR
Trigger: TCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATCG...TCTGGGTCCTGGGCCAGCCAGGATACCTGATAATAAAAGATCATTGGGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp TGTTCACCCAATGATCTTTTATTATCAGGTATCCTGGCTGGCCCAGGACCCAGACCTGGGCAATGCGCTTaGAGACCATCTTCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CSPNDLLLSGILAGPGPRPGQCA*RPSSPV
Trigger: CACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGG...TCTGGGTCCTGGGCCAGCCAGGATACCTGATAATAAAAGATCATTGGGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp AGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGATTTCACTGCCTCCTCTaGCCCCATCGCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: SRAEHLRPILQVRKTRSRFHCLL*PHRKLL
Trigger: GAGGAGTTTGCGATGGGGCCAGAGGAGGCAGTGAAA...TCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp GATCCGTCTGCAGAGACTTTAGGTGCCGTCTTTACAATGTTGCTCAGATCAACCCTGGCCACAGACTCCTaGAGGTCACTGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: DPSAETLGAVFTMLLRSTLATDS*RSLSIC
Trigger: GCAGATGCTCAGTGACCTCCAGGAGTCTGTGGCCAG...GGTTGATCTGAGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR CCA 90 bp GATGTTGGCGTGCAGCCGATAGATGCTCCTGAGCTTGCTTATTGCAGTAATATCGGCATCCAGGAGGTCTaGCTGTCCATCAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: DVGVQPIDAPELAYCSNIGIQEV*LSISQH
Trigger: GTGCTGACTGATGGACAGCCAGACCTCCTGGATGCC...GATATTACTGCAATAAGCAAGCTCAGGAGCATCTATCGGCTGCACGCCAACATC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CCA 90 bp TGTTCACCCAATGATCTTTTATTATCAGGTATCCTGGCTGGCCCAGGACCCAGAGCATGGTTGTGGGCATaGCCAAAGGGCACACGGATG +
Preference number: 4 (lower is better)
Translates to: CSPNDLLLSGILAGPGPRAWLWA*PKGTRM
Trigger: CATCCGTGTGCCCTTTGGCCATGCCCACAACCATGC...TCTGGGTCCTGGGCCAGCCAGGATACCTGATAATAAAAGATCATTGGGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp AAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCACAATCATCTTGGCATaGTTGTGGGCATGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KSGQSGADSRSFSHILGVTIILA*LWAWPK
Trigger: CTTTGGCCATGCCCACAACCATGCCAAGATGATTGT...GACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTCCTGCACAATCATCTTaGCATGGTTGTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPPAQSS*HGCGHG
Trigger: GCCATGCCCACAACCATGCCAAGATGATTGTGCAGG...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp AGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGATGGTCCCTCATCTGGTaGTCATTGCAGTCGGCTAGC +
Preference number: 4 (lower is better)
Translates to: SRAEHLRPILQVRKTRSRWSLIW*SLQSAS
Trigger: GCTAGCCGACTGCAATGACCACCAGATGAGGGACCA...TCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp GGATCCGTCTGCAGAGACTTTAGGTGCCGTCTTTACAATGTTGCTCAGATCAACACTTCAGGCCAGGCATaGTGGCCTGCACTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GSVCRDFRCRLYNVAQINTSGQA*WPALWE
Trigger: CTCCCAAAGTGCAGGCCACCATGCCTGGCCTGAAGT...GTTGATCTGAGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CCA 90 bp AAGTTGCTGGGACCACAGACAGGTTTGGTTTTATGTAGAAGGCAAAGGGGAGCCTGCAGCCTTGACTCCTaGGCTCAAGTGATCTTCCCG +
Preference number: 4 (lower is better)
Translates to: KLLGPQTGLVLCRRQRGACSLDS*AQVIFP
Trigger: CGGGAAGATCACTTGAGCCCAGGAGTCAAGGCTGCA...GGCTCCCCTTTGCCTTCTACATAAAACCAAACCTGTCTGTGGTCCCAGCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR TCA 90 bp TGTTCACCCAATGATCTTTTATTATCAGGTATCCTGGCTGGCCCAGGACCCAGACATCTTCGCCTGTGTTaGTGTTGGCGTGCAGCCGAT +
Preference number: 4 (lower is better)
Translates to: CSPNDLLLSGILAGPGPRHLRLC*CWRAAD
Trigger: ATCGGCTGCACGCCAACATCAACACAGGCGAAGATG...TCTGGGTCCTGGGCCAGCCAGGATACCTGATAATAAAAGATCATTGGGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392335.6
ENST00000535612.6
CDS-3UTR TCA 90 bp AAGGGAAGGGCACTTCTAGGCAGAGGGCATGGCTTGTCACATGGGGGCTTGTGCGTCAGTTTATTCAGGTaGACACTCAAAAACACTGAC +
Preference number: 4 (lower is better)
Translates to: KGRALLGRGHGLSHGGLCVSLFR*TLKNTD
Trigger: GTCAGTGTTTTTGAGTGTTCACCTGAATAAACTGAC...GCACAAGCCCCCATGTGACAAGCCATGCCCTCTGCCTAGAAGTGCCCTTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR GCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGAAGCCTTTGTTCTCCTaGACAATCATCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKKPLFS*TIILAW
Trigger: CCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTT...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGCCTTTACCTAGGGCCTaGCAGAAAACACTTCTCATT +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKPLPRA*QKTLLI
Trigger: AATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGG...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CCA 90 bp TGTTCACCCAATGATCTTTTATTATCAGGTATCCTGGCTGGCCCAGGACCCAGACTCTGGTCCCTCATCTaGTGGTCATTGCAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: CSPNDLLLSGILAGPGPRLWSLI*WSLQSA
Trigger: AGCCGACTGCAATGACCACCAGATGAGGGACCAGAG...TCTGGGTCCTGGGCCAGCCAGGATACCTGATAATAAAAGATCATTGGGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CCA 90 bp TGTGTGGGCTCCTGGGATCCGTCTGCAGAGACTTTAGGTGCCGTCTTTACAATGCATTGCACTCCAGCCTaGCTGTATCTAGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: CVGSWDPSAETLGAVFTMHCTPA*LYLEQH
Trigger: ATGTTGCTCTAGATACAGCCAGGCTGGAGTGCAATG...CATTGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535758.1
CDS-3UTR GCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTCCGTCTTTACAATGTTaGTCAGATCAACCCCTTGCG +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPPSLQC*SDQPLA
Trigger: CGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGG...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp CCCTCCCCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGTGCAGAGACTTTAGGTaGCGTCTTTACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: PSPDPLPRACQKTLLIVKCRDFR*RLYNVA
Trigger: AGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCA...CTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGGGGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR GCA 90 bp CCCGACCCTTTACCTAGGGCCTGCCAGAAAACACTTCTCATTGTGAAGGGGACAAAGCCTTTGTTCTCCTaGACAATCATCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: PDPLPRACQKTLLIVKGTKPLFS*TIILAW
Trigger: CCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTT...TGTCCCCTTCACAATGAGAAGTGTTTTCTGGCAGGCCCTAGGTAAAGGGTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CCA 90 bp AGCTTTCACCAGGTCTTGCCGATTCTGTTCATGTTTCAGGCAAGCGTGACGCACACAATCATCTTGGCATaGTTGTGGGCATGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SFHQVLPILFMFQASVTHTIILA*LWAWPK
Trigger: CTTTGGCCATGCCCACAACCATGCCAAGATGATTGT...GTGCGTCACGCTTGCCTGAAACATGAACAGAATCGGCAAGACCTGGTGAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR CCA 90 bp TGGCTGTCCATCAGTCAGCACCGACAGGGCATTGAGGGACTGGAGCAGAAGGCCATCAAGTTTCCGTTCTaGAATTATCAAGTTTCCACT +
Preference number: 4 (lower is better)
Translates to: WLSISQHRQGIEGLEQKAIKFPF*NYQVST
Trigger: AGTGGAAACTTGATAATTCCAGAACGGAAACTTGAT...GGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTGACTGATGGACAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CCA 90 bp GGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGAGGGATGACCACAGACAGGTTTaGTTTTATGTAGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: GQIRDLSPTSWESPGRRDDHRQV*FYVEGK
Trigger: TTTGCCTTCTACATAAAACCAAACCTGTCTGTGGTC...ATCCCTCCTCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540634.2
3UTR CAA 72 bp CCGTCTGCAGAGACTTTAGGTGCCGTCTTTACAATGTaGCTCAGATCAACCCCTTGCGATTCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: PSAETLGAVFTM*LRSTPCDSNCS
Trigger: GGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCAGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
3UTR CAA 72 bp AACGCTTTGGTGGCTTCGATGAGCACCTTCAAGCCTTaGTTCTCCTGCACAATCATCTTGGCATGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: NALVASMSTFKP*FSCTIILAWLW
Trigger: CCACAACCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAAGCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545091.5
CDS-3UTR TCA 90 bp TTAGGTGCCGTCTTTACAATGTTGCTCAGATCAACCCCTTGCGATTCAAACTGCACTCCTGGAGGTCACTaGGCATCTGCAGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: LGAVFTMLLRSTPCDSNCTPGGH*ASAGCH
Trigger: ATGACATCCTGCAGATGCTCAGTGACCTCCAGGAGT...GCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGGCACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR TCA 90 bp TGTTCACCCAATGATCTTTTATTATCAGGTATCCTGGCTGGCCCAGGACCCAGACTTTGGTGGCTTCGATaGGCACCTTCAAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: CSPNDLLLSGILAGPGPRLWWLR*APSSLC
Trigger: ACAAAGGCTTGAAGGTGCTCATCGAAGCCACCAAAG...TCTGGGTCCTGGGCCAGCCAGGATACCTGATAATAAAAGATCATTGGGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGGCTTTCACCAGGTCTTaGCGATTCTGTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKEAFTRS*RFCSCF
Trigger: GAAACATGAACAGAATCGGCAAGACCTGGTGAAAGC...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp GCCAAGCAGGGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGAAGCCTTTGTTCTCCTaGACAATCATCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: AKQGGASETHFTGKKDKEKPLFS*TIILAW
Trigger: CCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTT...CTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCCCTGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp GAAGTTAAGTCAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGAAGCCTTTGTTCTCCTaGACAATCATCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: EVKSGQSGADSRSFSHILKPLFS*TIILAW
Trigger: CCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTT...CAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTGACTTAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR GCA 90 bp TTAGGTGCCGTCTTTACAATGTTGCTCAGATCAACCCCTTGCGATTCAAACTGCCCGAGATCATGCCATTaGACTCCAGCCTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: LGAVFTMLLRSTPCDSNCPRSCH*TPAWLY
Trigger: ATACAGCCAGGCTGGAGTGCAATGGCATGATCTCGG...GCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGGCACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535758.1
CDS-3UTR GCA 90 bp GGCGGAGCATCTGAGACCCATTTTACAGGTAAGAAAGACAAGGAGCAGAGGCCTTGCAGAGACTTTAGGTaGCGTCTTTACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: GGASETHFTGKKDKEQRPCRDFR*RLYNVA
Trigger: AGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCA...AGGCCTCTGCTCCTTGTCTTTCTTACCTGTAAAATGGGTCTCAGATGCTCCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR GCA 90 bp GGATCCGTCTGCAGAGACTTTAGGTGCCGTCTTTACAATGTTGCTCAGATCAACTGCAGAGACTTTAGGTaGCGTCTTTACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: GSVCRDFRCRLYNVAQINCRDFR*RLYNVA
Trigger: AGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCA...GTTGATCTGAGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS-3UTR GCA 90 bp AGGTGCCGTCTTTACAATGTTGCTCAGATCAACCCCTTGCGATTCAAACTGCTCTGCAGAGACTTTAGGTaGCGTCTTTACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: RCRLYNVAQINPLRFKLLCRDFR*RLYNVA
Trigger: AGCAACATTGTAAAGACGGCACCTAAAGTCTCTGCA...GAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACATTGTAAAGACGGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535758.1
ENST00000539985.5
CDS GCA 90 bp CTCCTGGAGGTCACTGAGCATCCGAGGGTCGCGCCAGCCCGACCCTaGGGCACCCCCACTCCCCACTCCGCGCGGGACAGGCCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: LLEVTEHPRVAPARP*GTPTPHSARDRPRQ
Trigger: CTGCCGAGGCCTGTCCCGCGCGGAGTGGGGAGTGGGGGTGCCGCAGGGTCGGGCTGGCGCGACCCTCGGATGCTCAGTGACCTCCAGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535288.1
CDS GCA 90 bp GTTTTGCCTCCAGAGCGTCCGCCCAGAAGAAGCGGACAGCGCGCTTaGGCAAGAGAGCCGGGCCGCGGCGGCCCGCGCCTGCGCACCAGG +
Preference number: 5 (lower is better)
Translates to: VLPPERPPRRSGQRA*AREPGRGGPRLRTR
Trigger: CCTGGTGCGCAGGCGCGGGCCGCCGCGGCCCGGCTCTCTTGCGCAAGCGCGCTGTCCGCTTCTTCTGGGCGGACGCTCTGGAGGCAAAAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392335.6
CDS CCA 90 bp CAGGCCTCGGCAGCCGCAGCGTCTCACCCGGTCTTCGCGGCCACGTaGGGAAAGGTGGGGCGCGCGGTTGTCACCCAGGGAGCCGCCTCT +
Preference number: 5 (lower is better)
Translates to: QASAAAASHPVFAAT*GKVGRAVVTQGAAS
Trigger: AGAGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGACCGGGTGAGACGCTGCGGCTGCCGAGGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000535288.1
ENST00000541898.5
CDS CCA 90 bp CAGCCGCAGCGTCTCACCCGGTCTTCGCGGCCACGTGGGGAAAGGTaGGGCGCGCGGTTGTCACCCAGGGAGCCGCCTCTAGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: QPQRLTRSSRPRGER*GARLSPREPPLAPS
Trigger: GGAAGGGGCTAGAGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGACCGGGTGAGACGCTGCGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269932.10
ENST00000541898.5
CDS-3UTR CAA 90 bp GGGGTAGGCCCCCTTCTGGGCCGCGAGGAAGCGGCAGGCCTTGTCCTGTTTGCAAGGTGGGGCGCGCGGTaGTCACCCAGGGAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: GVGPLLGREEAAGLVLFARWGAR*SPREPP
Trigger: AGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCT...TGCAAACAGGACAAGGCCTGCCGCTTCCTCGCGGCCCAGAAGGGGGCCTACCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS GCA 90 bp AAGGTAAAGCCAACGAGGCCACCTCGTGCGCGACGGAGGCGTCTTTaGCGCCCCTTCCGGGACGCTCACGGTGGTCGCCGCCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: KVKPTRPPRARRRRL*RPFRDAHGGRRPQQ
Trigger: CTGCTGGGGGCGGCGACCACCGTGAGCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCGCGCACGAGGTGGCCTCGTTGGCTTTACCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000536098.5
ENST00000537263.5
ENST00000539985.5
ENST00000540707.5
ENST00000540792.5
ENST00000541898.5
ENST00000543877.1
ENST00000546344.5
CDS GCA 90 bp CTGCCCACCTGCACGCCGGCCTTCTGCGGGTGTGCCTTCATGGCCTaGAGTGCTGCCACAGCCCCGCCACCCTCCACGATGATGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LPTCTPAFCGCAFMA*SAATAPPPSTMMRL
Trigger: CAGCCGCATCATCGTGGAGGGTGGCGGGGCTGTGGCAGCACTGCAGGCCATGAAGGCACACCCGCAGAAGGCCGGCGTGCAGGTGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS CCA 90 bp CCCAGGTCCCGCAGGGCGGCCTTGGCCACGTCCTCACAGTCACGGTaGGCAGATCGGGCCTGCATGATGAGTGCCTCAGCCCCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PRSRRAALATSSQSR*ADRACMMSASAPRS
Trigger: GGACCTGGGGGCTGAGGCACTCATCATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGACCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
ENST00000540634.2
ENST00000546344.5
CDS CCA 90 bp GCAGCCGATAGATGCTCCCGGTCTTCGCGGCCACGTGGGGAAAGGTaGGGCGCGCGGTTGTCACCCAGGGAGCCGCCTCTAGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: AADRCSRSSRPRGER*GARLSPREPPLAPS
Trigger: GGAAGGGGCTAGAGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGACCGGGAGCATCTATCGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536098.5
CDS CCA 90 bp CACTCAGTGCACAGGTGCCGGTCTTCGCGGCCACGTGGGGAAAGGTaGGGCGCGCGGTTGTCACCCAGGGAGCCGCCTCTAGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: HSVHRCRSSRPRGER*GARLSPREPPLAPS
Trigger: GGAAGGGGCTAGAGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGACCGGCACCTGTGCACTGAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535612.6
ENST00000539985.5
ENST00000540792.5
ENST00000543877.1
CDS CCA 90 bp ACGCAGCAGGCACTCAGTGCACAGGTGCCGGTCTTCGCGGCCACGTaGGGAAAGGTGGGGCGCGCGGTTGTCACCCAGGGAGCCGCCTCT +
Preference number: 5 (lower is better)
Translates to: TQQALSAQVPVFAAT*GKVGRAVVTQGAAS
Trigger: AGAGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGACCGGCACCTGTGCACTGAGTGCCTGCTGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535612.6
ENST00000539985.5
ENST00000540792.5
ENST00000543877.1
CDS CCA 90 bp CCACGGAAGCTGGGGGCCTGCCAGAGTCACGGCCCAGACTGGGCCTaGGGTCATGGCGCCAGGTTGCCCCTCTGGCCTGTCCACAGCTCT +
Preference number: 5 (lower is better)
Translates to: PRKLGACQSHGPDWA*GHGARLPLWPVHSS
Trigger: AGAGCTGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACTCTGGCAGGCCCCCAGCTTCCGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CAA 90 bp GGCCGCGAGGAAGCGGCAGGCCTTGTCCTGTTTGCACTGGTCGCAGAAGCGGGTGCGACGGAGGCGTCTTaGCCGCCCCTTCCGGGACGC +
Preference number: 5 (lower is better)
Translates to: GREEAAGLVLFALVAEAGATEAS*PPLPGR
Trigger: GCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCGC...ACCCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCTGCCGCTTCCTCGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS CCA 90 bp GTGGCGAAACTCCATCTCCGGTCTTCGCGGCCACGTGGGGAAAGGTaGGGCGCGCGGTTGTCACCCAGGGAGCCGCCTCTAGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: VAKLHLRSSRPRGER*GARLSPREPPLAPS
Trigger: GGAAGGGGCTAGAGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGACCGGAGATGGAGTTTCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537263.5
CDS CCA 90 bp GCCTGGACACGTGGCGAAACTCCATCTCCGGTCTTCGCGGCCACGTaGGGAAAGGTGGGGCGCGCGGTTGTCACCCAGGGAGCCGCCTCT +
Preference number: 5 (lower is better)
Translates to: AWTRGETPSPVFAAT*GKVGRAVVTQGAAS
Trigger: AGAGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGACCGGAGATGGAGTTTCGCCACGTGTCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537263.5
CDS CCA 90 bp TGGAGGTCACTGAGCATCCGGTCTTCGCGGCCACGTGGGGAAAGGTaGGGCGCGCGGTTGTCACCCAGGGAGCCGCCTCTAGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: WRSLSIRSSRPRGER*GARLSPREPPLAPS
Trigger: GGAAGGGGCTAGAGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGACCGGATGCTCAGTGACCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS GCA 90 bp TCCGGGACGCTCACGGTGGTCGCCGCCCCCAGCAGGGAAATGTTTTaGCTCCAGAGCGTCCGCCCAGAAGAAGCGGACAGCGCGCTTGCG +
Preference number: 5 (lower is better)
Translates to: SGTLTVVAAPSREMF*LQSVRPEEADSALA
Trigger: CGCAAGCGCGCTGTCCGCTTCTTCTGGGCGGACGCTCTGGAGGCAAAACATTTCCCTGCTGGGGGCGGCGACCACCGTGAGCGTCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000537263.5
ENST00000540707.5
ENST00000540792.5
ENST00000546344.5
CDS GCA 90 bp CCAAGGACGACCGCGAACCAAGGTAAAGCCAACGAGGCCACCTCGTaGGCGACGGAGGCGTCTTTGCCGCCCCTTCCGGGACGCTCACGG +
Preference number: 5 (lower is better)
Translates to: PRTTANQGKANEATS*ATEASLPPLPGRSR
Trigger: CCGTGAGCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCGCGCACGAGGTGGCCTCGTTGGCTTTACCTTGGTTCGCGGTCGTCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000536098.5
ENST00000537263.5
ENST00000539985.5
ENST00000540707.5
ENST00000540792.5
ENST00000541898.5
ENST00000543877.1
ENST00000546344.5
CDS GCA 90 bp GCCTGTTTCTGCACGCCGGCCTTCTGCGGGTGTGCCTTCATGGCCTaGAGTGCTGCCACAGCCCCGCCACCCTCCACGATGATGCGGCTG +
Preference number: 5 (lower is better)
Translates to: ACFCTPAFCGCAFMA*SAATAPPPSTMMRL
Trigger: CAGCCGCATCATCGTGGAGGGTGGCGGGGCTGTGGCAGCACTGCAGGCCATGAAGGCACACCCGCAGAAGGCCGGCGTGCAGAAACAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000546344.5
CDS CCA 90 bp ATTCCACGGAAGCTGGGGGCCCAGAGTCACGGCCCAGACTGGGCCTaGGGTCATGGCGCCAGGTTGCCCCTCTGGCCTGTCCACAGCTCT +
Preference number: 5 (lower is better)
Translates to: IPRKLGAQSHGPDWA*GHGARLPLWPVHSS
Trigger: AGAGCTGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACTCTGGGCCCCCAGCTTCCGTGGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540634.2
CDS-3UTR CAA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGGCGACGGAGGCGTCTTaGCCGCCCCTTCCGGGACGC +
Preference number: 5 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGATEAS*PPLPGR
Trigger: GCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCGC...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CAA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGGCGACGGAGGCGTCTTaGCCGCCCCTTCCGGGACGC +
Preference number: 5 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLATEAS*PPLPGR
Trigger: GCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCGC...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CAA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGGCGACGGAGGCGTCTTaGCCGCCCCTTCCGGGACGC +
Preference number: 5 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGATEAS*PPLPGR
Trigger: GCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCGC...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CAA 90 bp CCCAGGTCCCGCAGGGCGGCCTTGGCCACGTCCTCACAGTCACGGTGGGCAGATACGATGATGCGGCTGTaGTCGGGCTTACGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PRSRRAALATSSQSRWADTMMRL*SGLRRA
Trigger: GGCCCTGCGTAAGCCCGACAACAGCCGCATCATCGT...ATCTGCCCACCGTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGACCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CAA 90 bp CTGGCCTGTCCACAGCTCTCGGAGCTCGACATGACAACCCAGGTCCCGCAGGGCGGTCATGGCGCCAGGTaGCCCCTCTGGCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: LACPQLSELDMTTQVPQGGHGAR*PLWPVH
Trigger: GTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACC...GCCCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGACAGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS TCA 90 bp CCTTCATGGCCTGCAGTGCTGCCACAGCCCCGCCACCCTCCACGATaGTGCGGCTGTTGTCGGGCTTACGCAGGGCCAGGAAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: PSWPAVLPQPRHPPR*CGCCRAYAGPGSTG
Trigger: CCCTGTGCTTCCTGGCCCTGCGTAAGCCCGACAACAGCCGCATCATCGTGGAGGGTGGCGGGGCTGTGGCAGCACTGCAGGCCATGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
ENST00000546344.5
CDS GCA 90 bp GCGGCCTTGGCCACGTCCTCACAGTCACGGTGGGCAGATCGGGCCTaGATGATGAGTGCCTCAGCCCCCAGGTCCAGGATGGGCTTCGAG +
Preference number: 5 (lower is better)
Translates to: AALATSSQSRWADRA*MMSASAPRSRMGFE
Trigger: CTCGAAGCCCATCCTGGACCTGGGGGCTGAGGCACTCATCATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGACGTGGCCAAGGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
ENST00000540634.2
ENST00000546344.5
CDS GCA 90 bp GCCAGAGTCACGGCCCAGACTGGGCCTGGGGTCATGGCGCCAGGTTaGCCCTCTGGCCTGTCCACAGCTCTCGGAGCTCGACATGACAAC +
Preference number: 5 (lower is better)
Translates to: ARVTAQTGPGVMAPG*PSGLSTALGARHDN
Trigger: GTTGTCATGTCGAGCTCCGAGAGCTGTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAGTCTGGGCCGTGACTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS CCA 90 bp CAAGGACAACATAGTAAGGCCCCGTCTCCGGTCTTCGCGGCCACGTaGGGAAAGGTGGGGCGCGCGGTTGTCACCCAGGGAGCCGCCTCT +
Preference number: 5 (lower is better)
Translates to: QGQHSKAPSPVFAAT*GKVGRAVVTQGAAS
Trigger: AGAGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCTTTCCCCACGTGGCCGCGAAGACCGGAGACGGGGCCTTACTATGTTGTCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540707.5
CDS-3UTR CAA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTGCGACGGAGGCGTCTTaGCCGCCCCTTCCGGGACGC +
Preference number: 5 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCATEAS*PPLPGR
Trigger: GCGTCCCGGAAGGGGCGGCAAAGACGCCTCCGTCGC...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CAA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGGTGGCGCCCCTAGGCTaGGCCTCCCAGAGACTCGCG +
Preference number: 5 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGVAPLG*ASQRLA
Trigger: CGCGAGTCTCTGGGAGGCCAAGCCTAGGGGCGCCAC...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CAA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGGTGGCGCCCCTAGGCTaGGCCTCCCAGAGACTCGCG +
Preference number: 5 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGVAPLG*ASQRLA
Trigger: CGCGAGTCTCTGGGAGGCCAAGCCTAGGGGCGCCAC...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CAA 90 bp CCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCGGTCATGGCGCCAGGTaGCCCCTCTGGCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: PCCWLGPRSGWDMGAAFFGHGAR*PLWPVH
Trigger: GTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACC...GAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS GCA 90 bp CACGTCCTCACAGTCACGGTGGGCAGATCGGGCCTGCATGATGAGTaGCTCAGCCCCCAGGTCCAGGATGGGCTTCGAGAAGGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: HVLTVTVGRSGLHDE*LSPQVQDGLREGLA
Trigger: GGCCAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGGCTGAGGCACTCATCATGCAGGCCCGATCTGCCCACCGTGACTGTGAGGACGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
ENST00000540634.2
ENST00000546344.5
CDS CCA 90 bp GCCTCAGCCCCCAGGTCCAGGATGGGCTTCGAGAAGGCCTGGCCGTaGGCCACCAGGTTTCGGATCAGCATGCAAGCCTGTTTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: ASAPRSRMGFEKAWP*ATRFRISMQACFWG
Trigger: CCCCCAGAAACAGGCTTGCATGCTGATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGGCTGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535478.5
CDS-3UTR CAA 90 bp TCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGGTGGCGCCCCTAGGCTaGGCCTCCCAGAGACTCGCG +
Preference number: 5 (lower is better)
Translates to: STPIPESHDSPRVTAQTGVAPLG*ASQRLA
Trigger: CGCGAGTCTCTGGGAGGCCAAGCCTAGGGGCGCCAC...CCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CAA 90 bp AAGACAAGGAGCAGAGGCCTGCATGAAACTGCAGTAAGCAGCAGGCGCCAGGGGAGGTGGGGCGCGCGGTaGTCACCCAGGGAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: KTRSRGLHETAVSSRRQGRWGAR*SPREPP
Trigger: AGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCT...CCCCTGGCGCCTGCTGCTTACTGCAGTTTCATGCAGGCCTCTGCTCCTTGTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CAA 90 bp CTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAAGGTGGGGCGCGCGGTaGTCACCCAGGGAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LAGTQKWLGHGGCFLLCRRWGAR*SPREPP
Trigger: AGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCT...TCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
CDS-3UTR CAA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTTCCCGCAGGGCGGCCTaGGCCACGTCCTCACAGTCA +
Preference number: 5 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLSRRAA*ATSSQS
Trigger: TGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGA...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp AGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGTCCCGCAGGGCGGCCTaGGCCACGTCCTCACAGTCA +
Preference number: 5 (lower is better)
Translates to: SNIRAAGWDPEVAGTWGLSRRAA*ATSSQS
Trigger: TGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGA...CAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp CAGGGTGACGCTCCTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGTCCCGCAGGGCGGCCTaGGCCACGTCCTCACAGTCA +
Preference number: 5 (lower is better)
Translates to: QGDAPQLFASAGFHGSWGSRRAA*ATSSQS
Trigger: TGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGA...CCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAGGAGCGTCACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CAA 90 bp TCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTGGTCATGGCGCCAGGTaGCCCCTCTGGCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: SVLLAGTQKWLGHGGCFLGHGAR*PLWPVH
Trigger: GTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACC...AAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS CCA 90 bp GCCTCAGCCCCCAGGTCCAGGATGGGCTTCGAGAAGGCCTGGCCGTaGGCCACCAGGTTTCGGATCAGCATGCAAGCCTGTTTCTGCACG +
Preference number: 5 (lower is better)
Translates to: ASAPRSRMGFEKAWP*ATRFRISMQACFCT
Trigger: CGTGCAGAAACAGGCTTGCATGCTGATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGGCTGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CAA 90 bp GCTGGCCACAGACTCCTGGAGGTCACTGAGCATCTGCAGGATGTCATGTGTGGGGTGGCGCCCCTAGGCTaGGCCTCCCAGAGACTCGCG +
Preference number: 5 (lower is better)
Translates to: AGHRLLEVTEHLQDVMCGVAPLG*ASQRLA
Trigger: CGCGAGTCTCTGGGAGGCCAAGCCTAGGGGCGCCAC...CCCACACATGACATCCTGCAGATGCTCAGTGACCTCCAGGAGTCTGTGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CAA 90 bp AGGTCACTGAGCATCTGCAGGATGTCATGTGTGGGCTCCTGGGATCCGTCTGCAAGGTGGGGCGCGCGGTaGTCACCCAGGGAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: RSLSICRMSCVGSWDPSARWGAR*SPREPP
Trigger: AGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCT...TGCAGACGGATCCCAGGAGCCCACACATGACATCCTGCAGATGCTCAGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539985.5
CDS-3UTR CAA 90 bp CAGGGCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAAGGTGGGGCGCGCGGTaGTCACCCAGGGAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: QGSLGQIRDLSPTSWESPRWGAR*SPREPP
Trigger: AGGCGGCTCCCTGGGTGACAACCGCGCGCCCCACCT...TGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CAA 90 bp GGGGTAGGCCCCCTTCTGGGCCGCGAGGAAGCGGCAGGCCTTGTCCTGTTTGCATCCTGGGCAATGCGCTaGGAGACCATCTTCGCCTGT +
Preference number: 5 (lower is better)
Translates to: GVGPLLGREEAAGLVLFASWAMR*ETIFAC
Trigger: ACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGGA...TGCAAACAGGACAAGGCCTGCCGCTTCCTCGCGGCCCAGAAGGGGGCCTACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539985.5
ENST00000545091.5
CDS-3UTR CAA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGACGATGATGCGGCTGTaGTCGGGCTTACGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGTMMRL*SGLRRA
Trigger: GGCCCTGCGTAAGCCCGACAACAGCCGCATCATCGT...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp TTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCACGGCCCAGACGATGATGCGGCTGTaGTCGGGCTTACGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: FASAGFHGSWGPARVTAQTMMRL*SGLRRA
Trigger: GGCCCTGCGTAAGCCCGACAACAGCCGCATCATCGT...CTGGGCCGTGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CAA 90 bp CTCAGCTGTTTGCATCGGCTGGATTCCACGGAAGCTGGGGGCCTGCCAGAGTCATCCCGCAGGGCGGCCTaGGCCACGTCCTCACAGTCA +
Preference number: 5 (lower is better)
Translates to: LSCLHRLDSTEAGGLPESSRRAA*ATSSQS
Trigger: TGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGA...TGACTCTGGCAGGCCCCCAGCTTCCGTGGAATCCAGCCGATGCAAACAGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546344.5
CDS-3UTR CAA 90 bp TGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCTCCCCCGGTCATGGCGCCAGGTaGCCCCTCTGGCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: WDMGAAFFCVEASLQGSPGHGAR*PLWPVH
Trigger: GTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACC...GGGGGAGCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS CCA 90 bp GCCTCAGCCCCCAGGTCCAGGATGGGCTTCGAGAAGGCCTGGCCGTaGGCCACCAGGTTTCGGATCAGCATGCAAGCCTGTTTCTGCACA +
Preference number: 5 (lower is better)
Translates to: ASAPRSRMGFEKAWP*ATRFRISMQACFCT
Trigger: TGTGCAGAAACAGGCTTGCATGCTGATCCGAAACCTGGTGGCCCACGGCCAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGGCTGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CAA 90 bp CCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGGGCAGGCCTTGTCCTGTTaGCACTGGTCGCAGAAGCGG +
Preference number: 5 (lower is better)
Translates to: PIPESHDSPRVTAQTGPGQALSC*HWSQKR
Trigger: CCGCTTCTGCGACCAGTGCAAACAGGACAAGGCCTG...CCCAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CAA 90 bp AGGGCAGTGAGTGATGGGACGTGCCCTTTGCCCCCTCTGGTAGGGCGTGGGGCTCAGGGTGCTCAGCACTaGCTTCACGAGCTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: RAVSDGTCPLPPLVGRGAQGAQH*LHELLN
Trigger: GTTCAGGAGCTCGTGAAGCAAGTGCTGAGCACCCTG...AGCCCCACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATCACTCACTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp CCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGACTGGGCCTGTCTTTCACGTCGTCGTaGCCTGCGATGGCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: PPFLSHTTHPESRPRLGLSFTSS*PAMARR
Trigger: CCTGCGAGCCATCGCAGGCAACGACGACGTGAAAGA...CAGGCCCAGTCTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp CCCTCTGGCCTGTCCACAGCTCTCGGAGCTCGACATGACAACCCAGGTCCCGCATCTTTCACGTCGTCGTaGCCTGCGATGGCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: PSGLSTALGARHDNPGPASFTSS*PAMARR
Trigger: CCTGCGAGCCATCGCAGGCAACGACGACGTGAAAGA...TGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGACAGGCCAGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535795.1
CDS-3UTR CAA 90 bp GCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGACGATGATGCGGCTGTaGTCGGGCTTACGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: AAGWDPEVAGTWGLLSSVTMMRL*SGLRRA
Trigger: GGCCCTGCGTAAGCCCGACAACAGCCGCATCATCGT...CACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp GACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGACGATGATGCGGCTGTaGTCGGGCTTACGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: DSNIRAAGWDPEVAGTWGTMMRL*SGLRRA
Trigger: GGCCCTGCGTAAGCCCGACAACAGCCGCATCATCGT...CCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp CATGGATCTACCCCCATTCCTGAGTCACACGACTCACCCAGAGTCACGGCCCAGTCCCGCAGGGCGGCCTaGGCCACGTCCTCACAGTCA +
Preference number: 5 (lower is better)
Translates to: HGSTPIPESHDSPRVTAQSRRAA*ATSSQS
Trigger: TGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGA...CTGGGCCGTGACTCTGGGTGAGTCGTGTGACTCAGGAATGGGGGTAGATCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp CCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTAGGTCATGGCGCCAGGTaGCCCCTCTGGCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: PRSGWDMGAAFFCVEASLGHGAR*PLWPVH
Trigger: GTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACC...TAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp CTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTGATGGGACGTGCCCTTaGCCCCCTCTGGTAGGGCGT +
Preference number: 5 (lower is better)
Translates to: LLAGTQKWLGHGGCFLLCDGTCP*PPLVGR
Trigger: ACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATC...ACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp GGAAGGAGCAGGACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGATGGGACGTGCCCTTaGCCCCCTCTGGTAGGGCGT +
Preference number: 5 (lower is better)
Translates to: GRSRTVTSVLLAGTQKWLDGTCP*PPLVGR
Trigger: ACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATC...CAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp ACAGTAACATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCAGCACCGACAGGGCATaGAGGGACTGGAGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: TVTSVLLAGTQKWLGHGGSTDRA*RDWSRR
Trigger: CCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCT...GCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATGTTACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535612.6
CDS-3UTR CAA 90 bp CATCCGTGCTGCTGGCTGGGACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCCTCATCTGGTGGTCATaGCAGTCGGCTAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: HPCCWLGPRSGWDMGAAFLIWWS*QSASRD
Trigger: GTCCCTGCTAGCCGACTGCAATGACCACCAGATGAG...GAAAGCAGCCCCCATGTCCCAGCCACTTCTGGGTCCCAGCCAGCAGCACGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000392336.7
ENST00000535478.5
ENST00000535612.6
CDS-3UTR CAA 90 bp CTGAGCCTGGCCCACAGTGGCTGCCACATTTCAGACAGGGCAGTGAGTGATGGGACGATGATGCGGCTGTaGTCGGGCTTACGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LSLAHSGCHISDRAVSDGTMMRL*SGLRRA
Trigger: GGCCCTGCGTAAGCCCGACAACAGCCGCATCATCGT...CCCATCACTCACTGCCCTGTCTGAAATGTGGCAGCCACTGTGGGCCAGGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp GCAGTCTGGGGCAGATTCGAGATCTTTCTCCCACATCCTGGGAGTCTCCAGGGAGGTCATGGCGCCAGGTaGCCCCTCTGGCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: AVWGRFEIFLPHPGSLQGGHGAR*PLWPVH
Trigger: GTGGACAGGCCAGAGGGGCAACCTGGCGCCATGACC...TCCCTGGAGACTCCCAGGATGTGGGAGAAAGATCTCGAATCTGCCCCAGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540634.2
ENST00000546344.5
CDS-3UTR CAA 90 bp AGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTACAAGGCGATGGGACGTGCCCTTaGCCCCCTCTGGTAGGGCGT +
Preference number: 5 (lower is better)
Translates to: SGWDMGAAFFCVEASLQGDGTCP*PPLVGR
Trigger: ACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATC...GCCTTGTAGGGAGGCCTCTACACAGAAGAAAGCAGCCCCCATGTCCCAGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269932.10
ENST00000392335.6
ENST00000535478.5
ENST00000535612.6
ENST00000535795.1
CDS-3UTR CAA 90 bp ACCCAGAAGTGGCTGGGACATGGGGGCTGCTTTCTTCTGTGTAGAGGCCTCCCTGATGGGACGTGCCCTTaGCCCCCTCTGGTAGGGCGT +
Preference number: 5 (lower is better)
Translates to: TQKWLGHGGCFLLCRGLPDGTCP*PPLVGR
Trigger: ACGCCCTACCAGAGGGGGCAAAGGGCACGTCCCATC...AGGGAGGCCTCTACACAGAAGAAAGCAGCC