RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARMC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000140691

Ensembl transcript IDs: ENST00000268314.9, ENST00000408912.7, ENST00000457010.6, ENST00000563544.5, ENST00000564514.2, ENST00000564900.1

Found 757 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGCCGGCCGGGTCAGCGCCGCAAGGAGGAGCCGGAGACCACCCTaGTCCAGAAGCAGCCGGCGCCACAGAGAGGGCTTCCTACAGGGA +
Preference number: 1 (lower is better)
Translates to: GAGRVSAARRSRRPP*SRSSRRHREGFLQG
Trigger: TCCCTGTAGGAAGCCCTCTCTGTGGCGCCGGCTGCTTCTGGAGCAGGGTGGTCTCCGGCTCCTCCTTGCGGCGCTGACCCGGCCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR TCA 90 bp CCTCCCCCAACCCCGCAAGGCACCCACTTCCCACTCACCGGCAGATaGAGGGCAGGGTCAGCGCGCAGGCCACTCGGTCCTCAGGGCTCC +
Preference number: 1 (lower is better)
Translates to: PPPTPQGTHFPLTGR*RAGSARRPLGPQGS
Trigger: GGAGCCCTGAGGACCGAGTGGCCTGCGCGCTGACCCTGCCCTTCATCTGCCGGTGAGTGGGAAGTGGGTGCCTTGCGGGGTTGGGGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR GCA 90 bp TCGGCCAGCGGACGCACTGCTCCCTGCTGTGCCAAGGCCAGGCGGTaGTGGGGTGAGTCTGCCAGGTTACGGAGGGCACGCACCACGCTC +
Preference number: 1 (lower is better)
Translates to: SASGRTAPCCAKARR*WGESARLRRARTTL
Trigger: GAGCGTGGTGCGTGCCCTCCGTAACCTGGCAGACTCACCCCAGCACCGCCTGGCCTTGGCACAGCAGGGAGCAGTGCGTCCGCTGGCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 90 bp GAGGCAGGAAAGGGAGTCCGCGGCAAAGAAGAGGAAGAGCGGGTGTaGGGCCGGCCGGGTCAGCGCCGCAAGGAGGAGCCGGAGACCACC +
Preference number: 1 (lower is better)
Translates to: EAGKGVRGKEEEERV*GRPGQRRKEEPETT
Trigger: GGTGGTCTCCGGCTCCTCCTTGCGGCGCTGACCCGGCCGGCCCCACACCCGCTCTTCCTCTTCTTTGCCGCGGACTCCCTTTCCTGCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR CCA 90 bp GCCAGCGGACGCACTGCTCCCTGCTGTGCCAAGGCCAGGCGGTGCTaGGGTGAGTCTGCCAGGTTACGGAGGGCACGCACCACGCTCTGT +
Preference number: 1 (lower is better)
Translates to: ASGRTAPCCAKARRC*GESARLRRARTTLC
Trigger: ACAGAGCGTGGTGCGTGCCCTCCGTAACCTGGCAGACTCACCCCAGCACCGCCTGGCCTTGGCACAGCAGGGAGCAGTGCGTCCGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 90 bp AAGAAAGGGGAGGCGGTGGCTGAGGCCGCTCGCTGGGCAGGGAGCTaGAGGCCTGAGTCCAGCAGGAAGTGCAGGTCGGGAGCTGGGACA +
Preference number: 1 (lower is better)
Translates to: KKGEAVAEAARWAGS*RPESSRKCRSGAGT
Trigger: TGTCCCAGCTCCCGACCTGCACTTCCTGCTGGACTCAGGCCTCCAGCTCCCTGCCCAGCGAGCGGCCTCAGCCACCGCCTCCCCTTTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR GCA 90 bp CCCACACCCCCGACAACCATGCAAATGATGCAGGACAGGCCAGGCTaGACCAGGCGACAGACCTCGCAGGGGCACCAGGTCCATCTGGGC +
Preference number: 1 (lower is better)
Translates to: PTPPTTMQMMQDRPG*TRRQTSQGHQVHLG
Trigger: GCCCAGATGGACCTGGTGCCCCTGCGAGGTCTGTCGCCTGGTGCAGCCTGGCCTGTCCTGCATCATTTGCATGGTTGTCGGGGGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR CCA 90 bp CAGGCTGCACCAGGCGACAGACCTCGCAGGGGCACCAGGTCCATCTaGGCTTCTGCAAAGCTGCCTGACAGCAGGGCCCGGAAGAAAGGG +
Preference number: 1 (lower is better)
Translates to: QAAPGDRPRRGTRSI*ASAKLPDSRARKKG
Trigger: CCCTTTCTTCCGGGCCCTGCTGTCAGGCAGCTTTGCAGAAGCCCAGATGGACCTGGTGCCCCTGCGAGGTCTGTCGCCTGGTGCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR TCA 90 bp GACAAGGACAGAAGGTGGGACAGTCAGGGTGTAAGTCTGGGCCCCTaGAGTGTGGGCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACGG +
Preference number: 1 (lower is better)
Translates to: DKDRRWDSQGVSLGP*SVGGKPPRRRGKRR
Trigger: CCGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCCCACACTTCAGGGGCCCAGACTTACACCCTGACTGTCCCACCTTCTGTCCTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR CCA 90 bp ACTGCCTGTGGGACAGCTGGGCTCACAGTGGGAGACACCAGGTCTTaGAGGCAGGAAAGGGAGTCCGCGGCAAAGAAGAGGAAGAGCGGG +
Preference number: 1 (lower is better)
Translates to: TACGTAGLTVGDTRS*RQERESAAKKRKSG
Trigger: CCCGCTCTTCCTCTTCTTTGCCGCGGACTCCCTTTCCTGCCTCCAAGACCTGGTGTCTCCCACTGTGAGCCCAGCTGTCCCACAGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR CCA 90 bp GCGAGCCTTCTGTTATGCCCGGACAGGGCCAGCAGAAGGGCTCCTTaGTCTAGCAGTAACGCCATGAAGCAGCCTGTGGTCAGGGCACAG +
Preference number: 1 (lower is better)
Translates to: ASLLLCPDRASRRAP*SSSNAMKQPVVRAQ
Trigger: CTGTGCCCTGACCACAGGCTGCTTCATGGCGTTACTGCTAGACCAAGGAGCCCTTCTGCTGGCCCTGTCCGGGCATAACAGAAGGCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR TCA 90 bp ACAGGGCTCTGGGCCCGTGAGATGAAGGAGGGTGAAACCTCTGGGTaGGAAATCAGGGCACTGAAGAGACAGTGCTGGGCTCGGGACGCT +
Preference number: 1 (lower is better)
Translates to: TGLWAREMKEGETSG*EIRALKRQCWARDA
Trigger: AGCGTCCCGAGCCCAGCACTGTCTCTTCAGTGCCCTGATTTCTCACCCAGAGGTTTCACCCTCCTTCATCTCACGGGCCCAGAGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR CCA 90 bp CTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTaGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGG +
Preference number: 1 (lower is better)
Translates to: LGCSASLGPTPRTWP*LLAPGSLDRHLGVR
Trigger: CCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
3UTR CCA 90 bp AATCTCAATTCCAGAGGTCTAGGCCAGGCCAGGCACCTGGGGCTCTaGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTT +
Preference number: 1 (lower is better)
Translates to: NLNSRGLGQARHLGL*AVLLLWALHPEPGL
Trigger: AAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAGCCCCAGGTGCCTGGCCTGGCCTAGACCTCTGGAATTGAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000457010.6
ENST00000564900.1
3UTR CCA 90 bp GAACAGCACCAGCACAGTGGATGTCCCCACAGCTCTCAGGTTCCATaGCTAAGTTCCCCAGGGCACGGGCCGTTCGGTTCTGGATGCTGT +
Preference number: 1 (lower is better)
Translates to: EQHQHSGCPHSSQVP*LSSPGHGPFGSGCC
Trigger: ACAGCATCCAGAACCGAACGGCCCGTGCCCTGGGGAACTTAGCCATGGAACCTGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 90 bp TCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTaGGTCCCCTTCCCAGGGGACGTCAACAGTCTAGGCAGGGACCCT +
Preference number: 1 (lower is better)
Translates to: SLASLREDPSQPIHP*VPFPGDVNSLGRDP
Trigger: AGGGTCCCTGCCTAGACTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR GCA 90 bp GAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTaGTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAG +
Preference number: 1 (lower is better)
Translates to: ESGSMFSPLLHDDSF*SASSLASLREDPSQ
Trigger: CTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
3UTR CCA 90 bp AACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTaGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCT +
Preference number: 1 (lower is better)
Translates to: NLALASRSRVFRSSS*SPVPCSHRSSMMTP
Trigger: AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
3UTR GCA 90 bp TCCCCAGGGCACGGGCCGTTCGGTTCTGGATGCTGTCTGTCTTCATaGACTGAAGAATGGTCACAAATAACTCTTTGGCCTCCGCTAGTC +
Preference number: 1 (lower is better)
Translates to: SPGHGPFGSGCCLSS*TEEWSQITLWPPLV
Trigger: GACTAGCGGAGGCCAAAGAGTTATTTGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCCGTGCCCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR TCA 90 bp AGGGCACGGGCCGTTCGGTTCTGGATGCTGTCTGTCTTCATGCACTaGAGAATGGTCACAAATAACTCTTTGGCCTCCGCTAGTCCAGCT +
Preference number: 1 (lower is better)
Translates to: RARAVRFWMLSVFMH*RMVTNNSLASASPA
Trigger: AGCTGGACTAGCGGAGGCCAAAGAGTTATTTGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCCGTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR TCA 90 bp CTCTCATCTATAGAGAGTGCAGTGACGTCACGGGGCACAACAGATTaGGAAACAGGAGCGATGCGCCATCACAAAGCACGTTATTCCGGG +
Preference number: 1 (lower is better)
Translates to: LSSIESAVTSRGTTD*ETGAMRHHKARYSG
Trigger: CCCGGAATAACGTGCTTTGTGATGGCGCATCGCTCCTGTTTCTCAATCTGTTGTGCCCCGTGACGTCACTGCACTCTCTATAGATGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR GCA 90 bp GTTCCATGGCTAAGTTCCCCAGGGCACGGGCCGTTCGGTTCTGGATaGTGTCTGTCTTCATGCACTGAAGAATGGTCACAAATAACTCTT +
Preference number: 1 (lower is better)
Translates to: VPWLSSPGHGPFGSG*CLSSCTEEWSQITL
Trigger: AAGAGTTATTTGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCCGTGCCCTGGGGAACTTAGCCATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 90 bp GGGCCGTTCGGTTCTGGATGCTGTCTGTCTTCATGCACTGAAGAATaGTCACAAATAACTCTTTGGCCTCCGCTAGTCCAGCTTCGAAAG +
Preference number: 1 (lower is better)
Translates to: GPFGSGCCLSSCTEE*SQITLWPPLVQLRK
Trigger: CTTTCGAAGCTGGACTAGCGGAGGCCAAAGAGTTATTTGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR GCA 90 bp CTACAATTATCTGGTCTGGGAGGGCTCTCTCTCATCTATAGAGAGTaGAGTGACGTCACGGGGCACAACAGATTGAGAAACAGGAGCGAT +
Preference number: 1 (lower is better)
Translates to: LQLSGLGGLSLIYRE*SDVTGHNRLRNRSD
Trigger: ATCGCTCCTGTTTCTCAATCTGTTGTGCCCCGTGACGTCACTGCACTCTCTATAGATGAGAGAGAGCCCTCCCAGACCAGATAATTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 90 bp GTCCTCAACAACCAATTCCTAGATAATGGCTACAATTATCTGGTCTaGGAGGGCTCTCTCTCATCTATAGAGAGTGCAGTGACGTCACGG +
Preference number: 1 (lower is better)
Translates to: VLNNQFLDNGYNYLV*EGSLSSIESAVTSR
Trigger: CCGTGACGTCACTGCACTCTCTATAGATGAGAGAGAGCCCTCCCAGACCAGATAATTGTAGCCATTATCTAGGAATTGGTTGTTGAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 90 bp TGCTGTCTGTCTTCATGCACTGAAGAATGGTCACAAATAACTCTTTaGCCTCCGCTAGTCCAGCTTCGAAAGAAGTCCTCAACAACCAAT +
Preference number: 1 (lower is better)
Translates to: CCLSSCTEEWSQITL*PPLVQLRKKSSTTN
Trigger: ATTGGTTGTTGAGGACTTCTTTCGAAGCTGGACTAGCGGAGGCCAAAGAGTTATTTGTGACCATTCTTCAGTGCATGAAGACAGACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR-3UTR TCA 90 bp GCCAGACCCCGCTTCCTCGGGCACTGCTCTGACCCCAGTGTCCAGCGGGCACAGAGGGGAGGCGGTGGCTaGGGCCGCTCGCTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: ARPRFLGHCSDPSVQRAQRGGGG*GRSLGR
Trigger: CCTGCCCAGCGAGCGGCCTCAGCCACCGCCTCCCCT...CTGTGCCCGCTGGACACTGGGGTCAGAGCAGTGCCCGAGGAAGCGGGGTCTGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR-3UTR TCA 90 bp GGCCGGCCCAGGCGGAACACCTCACCCACTGACTCCGGGCCACCCTGGGGTCCCAAGGGCGACTCAGCCTaGACCGTCAGGTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: GRPRRNTSPTDSGPPWGPKGDSA*TVRFCS
Trigger: ACTGCAGAACCTGACGGTTCAGGCTGAGTCGCCCTT...GGGACCCCAGGGTGGCCCGGAGTCAGTGGGTGAGGTGTTCCGCCTGGGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR-3UTR CCA 90 bp GGCCGGCCCAGGCGGAACACCTCACCCACTGACTCCGGGCCACCCTGGGGTCCCGAAAGCTTGTCAGGCTaGGAACTGGGGTCTAAGACA +
Preference number: 2 (lower is better)
Translates to: GRPRRNTSPTDSGPPWGPESLSG*ELGSKT
Trigger: TGTCTTAGACCCCAGTTCCCAGCCTGACAAGCTTTC...GGGACCCCAGGGTGGCCCGGAGTCAGTGGGTGAGGTGTTCCGCCTGGGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR-3UTR GCA 90 bp TCCTCGGGCACTGCTCTGACCCCAGTGTCCAGCGGGCACAGTGGGCAGCCAGCCCATGATGACTCCTTCTaGTCAGCCTCCTCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: SSGTALTPVSSGHSGQPAHDDSF*SASSLA
Trigger: GGCAAGGGAGGAGGCTGAGCAGAAGGAGTCATCATG...GGCTGGCTGCCCACTGTGCCCGCTGGACACTGGGGTCAGAGCAGTGCCCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR-3UTR CCA 90 bp CCAGGCAGTAGGAAACGGCCAGCAGCCTCCAGTGCCTCCTCGGCCTCTGAACCCGGCACCAGGTCCATCTaGGCTTCTGCAAAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: PGSRKRPAASSASSASEPGTRSI*ASAKLP
Trigger: AGGCAGCTTTGCAGAAGCCCAGATGGACCTGGTGCC...GGGTTCAGAGGCCGAGGAGGCACTGGAGGCTGCTGGCCGTTTCCTACTGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR-3UTR CCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATCCCTGGGGTCCCAGGTaGATGCGGCCCACGGCCTCT +
Preference number: 2 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHPWGPR*MRPTAS
Trigger: AGAGGCCGTGGGCCGCATCCACCTGGGACCCCAGGG...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR-3UTR CCA 90 bp GGGGTGAGTCTGCCAGGTTACGGAGGGCACGCACCACGCTCTGTAGGCACTGCGCGGGCCGTTCGGTTCTaGATGCTGTCTGTCTTCATG +
Preference number: 2 (lower is better)
Translates to: GVSLPGYGGHAPRSVGTARAVRF*MLSVFM
Trigger: CATGAAGACAGACAGCATCCAGAACCGAACGGCCCG...CGCAGTGCCTACAGAGCGTGGTGCGTGCCCTCCGTAACCTGGCAGACTCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR-3UTR TCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCCACTCACCGGCAGATaGAGGGCAGGGTCAGCGCGC +
Preference number: 2 (lower is better)
Translates to: FCSASSLASLREDPSQPIPLTGR*RAGSAR
Trigger: GCGCGCTGACCCTGCCCTTCATCTGCCGGTGAGTGG...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR-3UTR GCA 90 bp GGGGTGAGTCTGCCAGGTTACGGAGGGCACGCACCACGCTCTGTAGGCACTGCGCAAAGAACTCCAGACTaGCCGGGTCTAGAGAGCAAG +
Preference number: 2 (lower is better)
Translates to: GVSLPGYGGHAPRSVGTAQRTPD*PGLESK
Trigger: CTTGCTCTCTAGACCCGGGCAGTCTGGAGTTCTTTG...CGCAGTGCCTACAGAGCGTGGTGCGTGCCCTCCGTAACCTGGCAGACTCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR-3UTR CCA 90 bp GAGTCTGCCAGGTTACGGAGGGCACGCACCACGCTCTGTAGGCACTGCGAGTCCACAGCACCAGCACAGTaGATGTCCCCACAGCTCTCA +
Preference number: 2 (lower is better)
Translates to: ESARLRRARTTLCRHCESTAPAQ*MSPQLS
Trigger: TGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTGT...GGACTCGCAGTGCCTACAGAGCGTGGTGCGTGCCCTCCGTAACCTGGCAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CAA 90 bp CTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTaGGGTCCCCTTCCCAGGGGACGTCAACAGTCTAGGCAGGGACCC +
Preference number: 2 (lower is better)
Translates to: LPCQSQGGSFTANSS*GPLPRGRQQSRQGP
Trigger: GGGTCCCTGCCTAGACTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR-3UTR TCA 90 bp TGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCTTCTGCAAAGCTGCCTaGCAGCAGGGCCCGGAAGAA +
Preference number: 2 (lower is better)
Translates to: CSASLGPTPRTWPWLLAPFCKAA*QQGPEE
Trigger: TTCTTCCGGGCCCTGCTGTCAGGCAGCTTTGCAGAA...GGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR CAA 90 bp TCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTaGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCG +
Preference number: 2 (lower is better)
Translates to: SGLFCFSGPYTQNLA*ASRSRVFRSSSWSP
Trigger: CGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
3UTR-3UTR GCA 90 bp TCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTACATGATGACTCCTTCTaGTCAGCCTCCTCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: SLGPTPRTWPWLLAPGSLHDDSF*SASSLA
Trigger: GGCAAGGGAGGAGGCTGAGCAGAAGGAGTCATCATG...TAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
3UTR-3UTR GCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATCGCTTCCTCGGGCACTaGTCTGACCCCAGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHRFLGH*SDPSVQ
Trigger: CTGGACACTGGGGTCAGAGCAGTGCCCGAGGAAGCG...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR-3UTR GCA 90 bp TCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCATGATGACTCCTTCTaGTCAGCCTCCTCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: SGLFCFSGPYTQNLALASHDDSF*SASSLA
Trigger: GGCAAGGGAGGAGGCTGAGCAGAAGGAGTCATCATG...AGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
3UTR-3UTR GCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGGCTCTGGGCTGTTCTaGTTCTCTGGGCCCTACACC +
Preference number: 2 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHGSGLF*FSGPYT
Trigger: GGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAGCC...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000457010.6
ENST00000564900.1
3UTR-3UTR GCA 90 bp CTCCACAAGCAGGGGAACAGCACCAGCACAGTGGATGTCCCCACAGCTCTCAGGCTCATCTATAGAGAGTaGAGTGACGTCACGGGGCAC +
Preference number: 2 (lower is better)
Translates to: LHKQGNSTSTVDVPTALRLIYRE*SDVTGH
Trigger: GTGCCCCGTGACGTCACTGCACTCTCTATAGATGAG...CCTGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTGTTCCCCTGCTTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR-3UTR CCA 90 bp ATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGTCTGCCTGTGGGACAGCTaGGCTCACAGTGGGAGACAC +
Preference number: 2 (lower is better)
Translates to: ILHSQFILGSPSQGTSTVCLWDS*AHSGRH
Trigger: GTGTCTCCCACTGTGAGCCCAGCTGTCCCACAGGCA...GACTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR-3UTR GCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCATGATGACTCCTTCTaGTCAGCCTCCTCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: QNLALASRSRVFRSSSWSHDDSF*SASSLA
Trigger: GGCAAGGGAGGAGGCTGAGCAGAAGGAGTCATCATG...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
3UTR-3UTR GCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATCATGATGACTCCTTCTaGTCAGCCTCCTCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHHDDSF*SASSLA
Trigger: GGCAAGGGAGGAGGCTGAGCAGAAGGAGTCATCATG...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
3UTR-3UTR GCA 90 bp CAGCACCAGCACAGTGGATGTCCCCACAGCTCTCAGGTTCCATGGCTAAGTTCCGAGAAACAGGAGCGATaGGCCATCACAAAGCACGTT +
Preference number: 2 (lower is better)
Translates to: QHQHSGCPHSSQVPWLSSEKQER*AITKHV
Trigger: AACGTGCTTTGTGATGGCGCATCGCTCCTGTTTCTC...GGAACTTAGCCATGGAACCTGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR-3UTR TCA 90 bp CTCCACAAGCAGGGGAACAGCACCAGCACAGTGGATGTCCCCACAGCTCTCAGGTCTGTCTTCATGCACTaGAGAATGGTCACAAATAAC +
Preference number: 2 (lower is better)
Translates to: LHKQGNSTSTVDVPTALRSVFMH*RMVTNN
Trigger: GTTATTTGTGACCATTCTTCAGTGCATGAAGACAGA...CCTGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTGTTCCCCTGCTTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CAA 90 bp TCTCTCATCTATAGAGAGTGCAGTGACGTCACGGGGCACAACAGATaGAGAAACAGGAGCGATGCGCCATCACAAAGCACGTTATTCCGG +
Preference number: 2 (lower is better)
Translates to: SLIYRECSDVTGHNR*RNRSDAPSQSTLFR
Trigger: CCGGAATAACGTGCTTTGTGATGGCGCATCGCTCCTGTTTCTCAATCTGTTGTGCCCCGTGACGTCACTGCACTCTCTATAGATGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR-3UTR CCA 90 bp CTCCACAAGCAGGGGAACAGCACCAGCACAGTGGATGTCCCCACAGCTCTCAGGTCATGCACTGAAGAATaGTCACAAATAACTCTTTGG +
Preference number: 2 (lower is better)
Translates to: LHKQGNSTSTVDVPTALRSCTEE*SQITLW
Trigger: CCAAAGAGTTATTTGTGACCATTCTTCAGTGCATGA...CCTGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTGTTCCCCTGCTTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 72 bp AAGGGAGTCCGCGGCAAAGAAGAGGAAGAGCGGGTGTaGGGCCGGCCGGGTCAGCGCCGCAAGGAGGAGCCG +
Preference number: 3 (lower is better)
Translates to: KGVRGKEEEERV*GRPGQRRKEEP
Trigger: CGGCTCCTCCTTGCGGCGCTGACCCGGCCGGCCCCACACCCGCTCTTCCTCTTCTTTGCCGCGGACTCCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR GCA 72 bp GGACGCACTGCTCCCTGCTGTGCCAAGGCCAGGCGGTaGTGGGGTGAGTCTGCCAGGTTACGGAGGGCACGC +
Preference number: 3 (lower is better)
Translates to: GRTAPCCAKARR*WGESARLRRAR
Trigger: GCGTGCCCTCCGTAACCTGGCAGACTCACCCCAGCACCGCCTGGCCTTGGCACAGCAGGGAGCAGTGCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 72 bp CGCACTGCTCCCTGCTGTGCCAAGGCCAGGCGGTGCTaGGGTGAGTCTGCCAGGTTACGGAGGGCACGCACC +
Preference number: 3 (lower is better)
Translates to: RTAPCCAKARRC*GESARLRRART
Trigger: GGTGCGTGCCCTCCGTAACCTGGCAGACTCACCCCAGCACCGCCTGGCCTTGGCACAGCAGGGAGCAGTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 72 bp CCAGGCGACAGACCTCGCAGGGGCACCAGGTCCATCTaGGCTTCTGCAAAGCTGCCTGACAGCAGGGCCCGG +
Preference number: 3 (lower is better)
Translates to: PGDRPRRGTRSI*ASAKLPDSRAR
Trigger: CCGGGCCCTGCTGTCAGGCAGCTTTGCAGAAGCCCAGATGGACCTGGTGCCCCTGCGAGGTCTGTCGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR GCA 72 bp CCGACAACCATGCAAATGATGCAGGACAGGCCAGGCTaGACCAGGCGACAGACCTCGCAGGGGCACCAGGTC +
Preference number: 3 (lower is better)
Translates to: PTTMQMMQDRPG*TRRQTSQGHQV
Trigger: GACCTGGTGCCCCTGCGAGGTCTGTCGCCTGGTGCAGCCTGGCCTGTCCTGCATCATTTGCATGGTTGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR CCA 72 bp AGGGCACGCACCACGCTCTGTAGGCACTGCGAGTCCTaGCAGGCTGTCAGGCTCTCCACAAGCAGGGGAACA +
Preference number: 3 (lower is better)
Translates to: RARTTLCRHCES*QAVRLSTSRGT
Trigger: TGTTCCCCTGCTTGTGGAGAGCCTGACAGCCTGCCAGGACTCGCAGTGCCTACAGAGCGTGGTGCGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 72 bp GGGACAGCTGGGCTCACAGTGGGAGACACCAGGTCTTaGAGGCAGGAAAGGGAGTCCGCGGCAAAGAAGAGG +
Preference number: 3 (lower is better)
Translates to: GTAGLTVGDTRS*RQERESAAKKR
Trigger: CCTCTTCTTTGCCGCGGACTCCCTTTCCTGCCTCCAAGACCTGGTGTCTCCCACTGTGAGCCCAGCTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR CCA 72 bp GGGCTTCCTACAGGGAAGAGAGGGCCTTTCAAAAGGTaGGCAACGGGCCTGGGAAACACAGCACTCCTCCCC +
Preference number: 3 (lower is better)
Translates to: GLPTGKRGPFKR*ATGLGNTALLP
Trigger: GGGGAGGAGTGCTGTGTTTCCCAGGCCCGTTGCCCACCTTTTGAAAGGCCCTCTCTTCCCTGTAGGAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR CCA 72 bp CAGCACAGTGGATGTCCCCACAGCTCTCAGGTTCCATaGCTAAGTTCCCCAGGGCACGGGCCGTTCGGTTCT +
Preference number: 3 (lower is better)
Translates to: QHSGCPHSSQVP*LSSPGHGPFGS
Trigger: AGAACCGAACGGCCCGTGCCCTGGGGAACTTAGCCATGGAACCTGAGAGCTGTGGGGACATCCACTGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 72 bp CTGTTATGCCCGGACAGGGCCAGCAGAAGGGCTCCTTaGTCTAGCAGTAACGCCATGAAGCAGCCTGTGGTC +
Preference number: 3 (lower is better)
Translates to: LLCPDRASRRAP*SSSNAMKQPVV
Trigger: GACCACAGGCTGCTTCATGGCGTTACTGCTAGACCAAGGAGCCCTTCTGCTGGCCCTGTCCGGGCATAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR-3UTR CAA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATTCTAGGCAGGGACCCTaGCCCCCAACTCAATCCCCA +
Preference number: 3 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHSRQGP*PPTQSP
Trigger: TGGGGATTGAGTTGGGGGCAAGGGTCCCTGCCTAGA...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR-3UTR CAA 90 bp TACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTACAGCCAATTCATCCTaGGGTCCCCTTCCCAGGGGA +
Preference number: 3 (lower is better)
Translates to: YTQNLALASRSRVFRSSSTANSS*GPLPRG
Trigger: TCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGT...AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
3UTR-3UTR CAA 90 bp GCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTACAGCCAATTCATCCTaGGGTCCCCTTCCCAGGGGA +
Preference number: 3 (lower is better)
Translates to: APGSLDRHLGVRFHVLTATANSS*GPLPRG
Trigger: TCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGT...AGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
3UTR CCA 72 bp TCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTaGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTT +
Preference number: 3 (lower is better)
Translates to: SASLGPTPRTWP*LLAPGSLDRHL
Trigger: AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
3UTR CCA 72 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTaGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATG +
Preference number: 3 (lower is better)
Translates to: LASRSRVFRSSS*SPVPCSHRSSM
Trigger: CATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
3UTR GCA 72 bp CTAAGTTCCCCAGGGCACGGGCCGTTCGGTTCTGGATaGTGTCTGTCTTCATGCACTGAAGAATGGTCACAA +
Preference number: 3 (lower is better)
Translates to: LSSPGHGPFGSG*CLSSCTEEWSQ
Trigger: TTGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCCGTGCCCTGGGGAACTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR GCA 72 bp TCTGGTCTGGGAGGGCTCTCTCTCATCTATAGAGAGTaGAGTGACGTCACGGGGCACAACAGATTGAGAAAC +
Preference number: 3 (lower is better)
Translates to: SGLGGLSLIYRE*SDVTGHNRLRN
Trigger: GTTTCTCAATCTGTTGTGCCCCGTGACGTCACTGCACTCTCTATAGATGAGAGAGAGCCCTCCCAGACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR GCA 72 bp ACGTTATTCCGGGATAGGACACAAAGAACTCCAGACTaGCCGGGTCTAGAGAGCAAGGGAGTTGCAAACCTA +
Preference number: 3 (lower is better)
Translates to: TLFRDRTQRTPD*PGLESKGVANL
Trigger: TAGGTTTGCAACTCCCTTGCTCTCTAGACCCGGGCAGTCTGGAGTTCTTTGTGTCCTATCCCGGAATAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR-3UTR CAA 90 bp ACAAATAACTCTTTGGCCTCCGCTAGTCCAGCTTCGAAAGAAGTCCTCAACAACACGGGGCACAACAGATaGAGAAACAGGAGCGATGCG +
Preference number: 3 (lower is better)
Translates to: TNNSLASASPASKEVLNNTGHNR*RNRSDA
Trigger: CGCATCGCTCCTGTTTCTCAATCTGTTGTGCCCCGT...GTTGTTGAGGACTTCTTTCGAAGCTGGACTAGCGGAGGCCAAAGAGTTATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR TCA 72 bp AACCTGGGAAAAACCAGGCCATACAGAGATAGGAGCTaGGGGGACATAGTGAGGTGTGACCAGAAGACAAGA +
Preference number: 3 (lower is better)
Translates to: NLGKTRPYRDRS*GDIVRCDQKTR
Trigger: TCTTGTCTTCTGGTCACACCTCACTATGTCCCCTCAGCTCCTATCTCTGTATGGCCTGGTTTTTCCCAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR TCA 72 bp GCCGTTCGGTTCTGGATGCTGTCTGTCTTCATGCACTaGAGAATGGTCACAAATAACTCTTTGGCCTCCGCT +
Preference number: 3 (lower is better)
Translates to: AVRFWMLSVFMH*RMVTNNSLASA
Trigger: AGCGGAGGCCAAAGAGTTATTTGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR GCA 72 bp CACGGGCCGTTCGGTTCTGGATGCTGTCTGTCTTCATaGACTGAAGAATGGTCACAAATAACTCTTTGGCCT +
Preference number: 3 (lower is better)
Translates to: HGPFGSGCCLSS*TEEWSQITLWP
Trigger: AGGCCAAAGAGTTATTTGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 72 bp TCTTCATGCACTGAAGAATGGTCACAAATAACTCTTTaGCCTCCGCTAGTCCAGCTTCGAAAGAAGTCCTCA +
Preference number: 3 (lower is better)
Translates to: SSCTEEWSQITL*PPLVQLRKKSS
Trigger: TGAGGACTTCTTTCGAAGCTGGACTAGCGGAGGCCAAAGAGTTATTTGTGACCATTCTTCAGTGCATGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
3UTR CCA 72 bp CAATATTGTAATAATCCTCGCTCTATAATCATAACCTaGGAAAAACCAGGCCATACAGAGATAGGAGCTGAG +
Preference number: 3 (lower is better)
Translates to: QYCNNPRSIIIT*EKPGHTEIGAE
Trigger: CTCAGCTCCTATCTCTGTATGGCCTGGTTTTTCCCAGGTTATGATTATAGAGCGAGGATTATTACAATATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp GGCCGGCCCAGGCGGAACACCTCACCCACTGACTCCGGGCCACCCTGGGGTCCCGCCGCCGCCGCGAGCTaGGCGAGGCAGAACGAGAGC +
Preference number: 4 (lower is better)
Translates to: GRPRRNTSPTDSGPPWGPAAAAS*ARQNES
Trigger: GCTCTCGTTCTGCCTCGCGCAGCTCGCGGCGGCGGC...GGGACCCCAGGGTGGCCCGGAGTCAGTGGGTGAGGTGTTCCGCCTGGGCCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp GTGCCTCCTCGGCCTCTGAACCCAGCAGGGGCTGGCCTGGTGGGGGCACGGGCCGGCCCATGGAGGGACTaGAACGCCCTGCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: VPPRPLNPAGAGLVGARAGPWRD*NALLPT
Trigger: GGTGGGGAGCAGGGCGTTCCAGTCCCTCCATGGGCC...GGCCCGTGCCCCCACCAGGCCAGCCCCTGCTGGGTTCAGAGGCCGAGGAGGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp GGCCGGCCCAGGCGGAACACCTCACCCACTGACTCCGGGCCACCCTGGGGTCCCACGAGAGCGAGTCCGTaGGGGTTGGCTTCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GRPRRNTSPTDSGPPWGPTRASP*GLASQP
Trigger: CGGCTGCGAAGCCAACCCTCACGGACTCGCTCTCGT...GGGACCCCAGGGTGGCCCGGAGTCAGTGGGTGAGGTGTTCCGCCTGGGCCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp GGGTGTAAGTCTGGGCCCCTGAAGTGTGGGCGGCAAGCCACCCAGGCGCCGAGGCGGGCACCGCCTCGCTaGCGCTGTTTAGCGCCACCG +
Preference number: 4 (lower is better)
Translates to: GCKSGPLKCGRQATQAPRRAPPR*RCLAPP
Trigger: CGGTGGCGCTAAACAGCGTCAGCGAGGCGGTGCCCG...CCTCGGCGCCTGGGTGGCTTGCCGCCCACACTTCAGGGGCCCAGACTTACACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp CCAGGCAGTAGGAAACGGCCAGCAGCCTCCAGTGCCTCCTCGGCCTCTGAACCCGGGCCGGGCACGTGGTaGCGGCCAATCGTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PGSRKRPAASSASSASEPGPGTW*RPIVRR
Trigger: GCGCCTGACGATTGGCCGGCACCACGTGCCCGGCCC...GGGTTCAGAGGCCGAGGAGGCACTGGAGGCTGCTGGCCGTTTCCTACTGCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp GGGTGTAAGTCTGGGCCCCTGAAGTGTGGGCGGCAAGCCACCCAGGCGCCGAGGAGCCGGAGACCACCCTaGTCCAGAAGCAGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: GCKSGPLKCGRQATQAPRSRRPP*SRSSRR
Trigger: GCGCCGGCTGCTTCTGGAGCAGGGTGGTCTCCGGCT...CCTCGGCGCCTGGGTGGCTTGCCGCCCACACTTCAGGGGCCCAGACTTACACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp TCCTCGGGCACTGCTCTGACCCCAGTGTCCAGCGGGCACAGTGGGCAGCCAGCCCCCGCTGCCTTGATGTaGCGCGTGCGGAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: SSGTALTPVSSGHSGQPAPAALM*RVRRAR
Trigger: CCTAGCCCTCCGCACGCGCCACATCAAGGCAGCGGG...GGCTGGCTGCCCACTGTGCCCGCTGGACACTGGGGTCAGAGCAGTGCCCGAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp CAGGACAGGCCAGGCTGCACCAGGCGACAGACCTCGCAGGGGCACCAGGTCCATGCTGAGGCCGCTCGCTaGGCAGGGAGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QDRPGCTRRQTSQGHQVHAEAAR*AGSWRP
Trigger: AGGCCTCCAGCTCCCTGCCCAGCGAGCGGCCTCAGC...ATGGACCTGGTGCCCCTGCGAGGTCTGTCGCCTGGTGCAGCCTGGCCTGTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp GGGTGTAAGTCTGGGCCCCTGAAGTGTGGGCGGCAAGCCACCCAGGCGCCGAGGAGGGTGCCATGCGCTTaGACGAGGGTCCCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GCKSGPLKCGRQATQAPRRVPCA*TRVPQQ
Trigger: CTGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCT...CCTCGGCGCCTGGGTGGCTTGCCGCCCACACTTCAGGGGCCCAGACTTACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp CCAGGCAGTAGGAAACGGCCAGCAGCCTCCAGTGCCTCCTCGGCCTCTGAACCCCCGGAGTGCGTTGGGTaGGTGGTGCCCGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: PGSRKRPAASSASSASEPPECVG*VVPAAR
Trigger: CCTCGCTGCGGGCACCACGCACCCAACGCACTCCGG...GGGTTCAGAGGCCGAGGAGGCACTGGAGGCTGCTGGCCGTTTCCTACTGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp TCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGGCGTTGGGTGCGTGGTaGCCGCAGCGAGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: SASLGPTPRTWPWLLAPGALGAW*PQRGRG
Trigger: ACCCCGACCTCGCTGCGGGCACCACGCACCCAACGC...CCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp TGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCGCTGAGGCCGCTCGCTaGGCAGGGAGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: CFSGPYTQNLALASRSRVAEAAR*AGSWRP
Trigger: AGGCCTCCAGCTCCCTGCCCAGCGAGCGGCCTCAGC...GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR TCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTAGGGGAGGCGGTGGCTaGGGCCGCTCGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRRGGGG*GRSLGR
Trigger: CCTGCCCAGCGAGCGGCCTCAGCCACCGCCTCCCCT...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGGCCAAGGCCAGGCGGTaGTGGGGTGAGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SASLGPTPRTWPWLLAPGAKARR*WGESAR
Trigger: CCTGGCAGACTCACCCCAGCACCGCCTGGCCTTGGC...CCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR GCA 90 bp GAGTCTGCCAGGTTACGGAGGGCACGCACCACGCTCTGTAGGCACTGCGAGTCCGCCAAGGCCAGGCGGTaGTGGGGTGAGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ESARLRRARTTLCRHCESAKARR*WGESAR
Trigger: CCTGGCAGACTCACCCCAGCACCGCCTGGCCTTGGC...GGACTCGCAGTGCCTACAGAGCGTGGTGCGTGCCCTCCGTAACCTGGCAGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR GCA 90 bp GGGTGTAAGTCTGGGCCCCTGAAGTGTGGGCGGCAAGCCACCCAGGCGCCGAGGGGCTCTGGGCTGTTCTaGTTCTCTGGGCCCTACACC +
Preference number: 4 (lower is better)
Translates to: GCKSGPLKCGRQATQAPRGSGLF*FSGPYT
Trigger: GGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAGCC...CCTCGGCGCCTGGGTGGCTTGCCGCCCACACTTCAGGGGCCCAGACTTACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp CAGGACAGGCCAGGCTGCACCAGGCGACAGACCTCGCAGGGGCACCAGGTCCATAGGCACTGCGAGTCCTaGCAGGCTGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QDRPGCTRRQTSQGHQVHRHCES*QAVRLS
Trigger: GGAGAGCCTGACAGCCTGCCAGGACTCGCAGTGCCT...ATGGACCTGGTGCCCCTGCGAGGTCTGTCGCCTGGTGCAGCCTGGCCTGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp TCCTCGGGCACTGCTCTGACCCCAGTGTCCAGCGGGCACAGTGGGCAGCCAGCCCACAGGTCAGCGTGCTaGTGGGGAGCAGTCAGGACA +
Preference number: 4 (lower is better)
Translates to: SSGTALTPVSSGHSGQPAHRSAC*WGAVRT
Trigger: TGTCCTGACTGCTCCCCACCAGCACGCTGACCTGTG...GGCTGGCTGCCCACTGTGCCCGCTGGACACTGGGGTCAGAGCAGTGCCCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp TGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCACGAGAGCGAGTCCGTaGGGGTTGGCTTCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: CFSGPYTQNLALASRSRVTRASP*GLASQP
Trigger: CGGCTGCGAAGCCAACCCTCACGGACTCGCTCTCGT...GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR TCA 90 bp CAGGACAGGCCAGGCTGCACCAGGCGACAGACCTCGCAGGGGCACCAGGTCCATAGATCAGCCACGACCTaGGGCTCCGGAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: QDRPGCTRRQTSQGHQVHRSATT*GSGSFH
Trigger: GTGGAAGCTTCCGGAGCCTCAGGTCGTGGCTGATCT...ATGGACCTGGTGCCCCTGCGAGGTCTGTCGCCTGGTGCAGCCTGGCCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp CTTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATAGGGGAGGCGGTGGCTaGGGCCGCTCGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLLSLLPCQSQGGSFTANRGGGG*GRSLGR
Trigger: CCTGCCCAGCGAGCGGCCTCAGCCACCGCCTCCCCT...ATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCAGGGGAGGCGGTGGCTaGGGCCGCTCGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: WPWLLAPGSLDRHLGVRFRGGGG*GRSLGR
Trigger: CCTGCCCAGCGAGCGGCCTCAGCCACCGCCTCCCCT...GAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGGCCGCCGCCGCGAGCTaGGCGAGGCAGAACGAGAGC +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTAAAAS*ARQNES
Trigger: GCTCTCGTTCTGCCTCGCGCAGCTCGCGGCGGCGGC...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCCCGGAGTGCGTTGGGTaGGTGGTGCCCGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: CSASLGPTPRTWPWLLAPPECVG*VVPAAR
Trigger: CCTCGCTGCGGGCACCACGCACCCAACGCACTCCGG...GGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp CTCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCCCGGAGTGCGTTGGGTaGGTGGTGCCCGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: LWAVLLLWALHPEPGLGFPECVG*VVPAAR
Trigger: CCTCGCTGCGGGCACCACGCACCCAACGCACTCCGG...GAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTGGCTGCGGCCCGGAGTaGGTTGGGTGCGTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRGCGPE*VGCVVP
Trigger: GGGCACCACGCACCCAACGCACTCCGGGCCGCAGCC...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGCGCCGCGCCATAGCTaGGCACGAAGGCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: SLGPTPRTWPWLLAPGSLAPRHS*ARRPRG
Trigger: GCCTCGAGGCCTTCGTGCGCAGCTATGGCGCGGCGC...TAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp TGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCCTAGGCTCGCTTCGCTaGCCCCCAGCGGTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: CSASLGPTPRTWPWLLAPLGSLR*PPAVVR
Trigger: CCGCACCACCGCTGGGGGGCAGCGAAGCGAGCCTAG...GGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp TCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGGCCCGGAGTGCGTTaGGTGCGTGGTGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SGLFCFSGPYTQNLALASRPGVR*VRGARS
Trigger: GCTGCGGGCACCACGCACCCAACGCACTCCGGGCCG...AGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp TCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTGCCGGCTGTGGAGAGTaGGCCGGGCACGTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SGLFCFSGPYTQNLALASAGCGE*AGHVVP
Trigger: CGGCACCACGTGCCCGGCCCACTCTCCACAGCCGGC...AGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR TCA 90 bp CAGTCTAGGCAGGGACCCTTGCCCCCAACTCAATCCCCATCACCACAGCCAGCAGGGAGCAGCCTCGGCTaGGTTCCAGGAGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: QSRQGPLPPTQSPSPQPAGSSLG*VPGGHG
Trigger: TCCGTGCCCTCCTGGAACTCAGCCGAGGCTGCTCCC...TGCTGGCTGTGGTGATGGGGATTGAGTTGGGGGCAAGGGTCCCTGCCTAGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCAGGGGAGGCGGTGGCTaGGGCCGCTCGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSRGGGG*GRSLGR
Trigger: CCTGCCCAGCGAGCGGCCTCAGCCACCGCCTCCCCT...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATAGGGGAGGCGGTGGCTaGGGCCGCTCGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHRGGGG*GRSLGR
Trigger: CCTGCCCAGCGAGCGGCCTCAGCCACCGCCTCCCCT...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCCTCGGGCACTGCTCTaGCCCCAGTGTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SGLFCFSGPYTQNLALASPRALL*PQCPAG
Trigger: GCCCGCTGGACACTGGGGTCAGAGCAGTGCCCGAGG...AGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR TCA 90 bp GGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCGTGCGGGCGGTGCATaGGGGAGATGTGGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: GCSASLGPTPRTWPWLLARAGGA*GRCGPR
Trigger: ACGCGGACCACATCTCCCTCATGCACCGCCCGCACG...AGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp TGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCGCCGCCGCCGCGAGCTaGGCGAGGCAGAACGAGAGC +
Preference number: 4 (lower is better)
Translates to: WPWLLAPGSLDRHLGVRFAAAAS*ARQNES
Trigger: GCTCTCGTTCTGCCTCGCGCAGCTCGCGGCGGCGGC...GAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTACCAAGTCCAGCGTCTTaGGCAGGCGCACTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SLGPTPRTWPWLLAPGSLPSPAS*AGALAA
Trigger: CGCCGCCAGTGCGCCTGCGCAAGACGCTGGACTTGG...TAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR GCA 90 bp TGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCGCCTCACCACACAGCTaGCCAGCCAGGAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: CFSGPYTQNLALASRSRVASPHS*PARRGT
Trigger: TGTGCCTCTCCTGGCTGGGCAGCTGTGTGGTGAGGC...GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp CCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCGGCTGCGGCCCGGAGTaGGTTGGGTGCGTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PPLPVSGRILHSQFILGSGCGPE*VGCVVP
Trigger: GGGCACCACGCACCCAACGCACTCCGGGCCGCAGCC...GGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGGCTGCGGCCCGGAGTaGGTTGGGTGCGTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGGCGPE*VGCVVP
Trigger: GGGCACCACGCACCCAACGCACTCCGGGCCGCAGCC...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCCGGGCCGGTCACAAGTaGCCCACTTGGGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGCSASLGPTPRTWPWLLRAGHK*PTWVRG
Trigger: GCCCCTGACCCAAGTGGGGCACTTGTGACCGGCCCG...GAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTGCGCCGCGCCATAGCTaGGCACGAAGGCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRAPRHS*ARRPRG
Trigger: GCCTCGAGGCCTTCGTGCGCAGCTATGGCGCGGCGC...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCGGGGTCCCAGGTGGATaGGGCCCACGGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: AVLLLWALHPEPGLGFSLGVPGG*GPRPLP
Trigger: TGGAAGAGGCCGTGGGCCGCATCCACCTGGGACCCC...GAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp CCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGAGCCGGGCCGAAAGTaGGGGGTCCTGACCGCGCCG +
Preference number: 4 (lower is better)
Translates to: PVSGRILHSQFILGSPSQEPGRK*GVLTAP
Trigger: CGGCGCGGTCAGGACCCCGCACTTTCGGCCCGGCTC...CTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp GCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCGCGCATCCTGGGACGTaGGGGCGGTGCATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AVLLLWALHPEPGLGFSLAHPGT*GRCMRE
Trigger: CTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGC...GAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp TGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCACTGCCCGCTTGGGGTaGGAAGCCAGGCTGACGAGT +
Preference number: 4 (lower is better)
Translates to: CFSGPYTQNLALASRSRVTARLG*EARLTS
Trigger: ACTCGTCAGCCTGGCTTCCCACCCCAAGCGGGCAGT...GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR CCA 90 bp TGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCCAGCAGCAGCAGGGCTaGCCCTTCGCGTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: CSASLGPTPRTWPWLLAPQQQQG*PFASPR
Trigger: CCTTGGGGACGCGAAGGGCCAGCCCTGCTGCTGCTG...GGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp TCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGCTTGGGTCAGGGGCCTaGGAAAAGCGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SASLGPTPRTWPWLLAPGLGSGA*EKRDSS
Trigger: GCTGCTGTCGCGCTTTTCCCAGGCCCCTGACCCAAG...CCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp TCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTAATGCGCAGTGCACGTaGGCTGGGCGGGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: SGLFCFSGPYTQNLALASNAQCT*AGRARC
Trigger: GCACCGGGCCCGCCCAGCCCACGTGCACTGCGCATT...AGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp GAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACGCCGGCTGTGGAGAGTaGGCCGGGCACGTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: EDPSQPIHPWVPFPGDVNAGCGE*AGHVVP
Trigger: CGGCACCACGTGCCCGGCCCACTCTCCACAGCCGGC...GTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCAGGCAGTAGGAAACGGCCAGCAGCCTCCAGTGCCTCCTCGGCCTCTGAACCCCATGGGGACTGCCTGTaGGACAGCTGGGCTCACAGT +
Preference number: 4 (lower is better)
Translates to: PGSRKRPAASSASSASEPHGDCL*DSWAHS
Trigger: ACTGTGAGCCCAGCTGTCCCACAGGCAGTCCCCATG...GGGTTCAGAGGCCGAGGAGGCACTGGAGGCTGCTGGCCGTTTCCTACTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTGCTGAGGCCGCTCGCTaGGCAGGGAGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRAEAAR*AGSWRP
Trigger: AGGCCTCCAGCTCCCTGCCCAGCGAGCGGCCTCAGC...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAAGAAAGGGGAGGCGGTaGCTGAGGCCGCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLGPTPRTWPWLLAPGSLRKGRR*LRPLAG
Trigger: CCCAGCGAGCGGCCTCAGCCACCGCCTCCCCTTTCT...TAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp CCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTGAACCCAGCAGGGGCTaGCCTGGTGGGGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: PLPVSGRILHSQFILGSPEPSRG*PGGGTG
Trigger: GCCCGTGCCCCCACCAGGCCAGCCCCTGCTGGGTTC...AGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCGAACCCAGCAGGGGCTaGCCTGGTGGGGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHREPSRG*PGGGTG
Trigger: GCCCGTGCCCCCACCAGGCCAGCCCCTGCTGGGTTC...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCGAACCCAGCAGGGGCTaGCCTGGTGGGGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: PPLPVSGRILHSQFILGSEPSRG*PGGGTG
Trigger: GCCCGTGCCCCCACCAGGCCAGCCCCTGCTGGGTTC...GGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTGGTGCGGCCCGGCCTTaGGACGGACTCCGAGAACCC +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRGAARP*DGLREP
Trigger: GGGTTCTCGGAGTCCGTCCCAAGGCCGGGCCGCACC...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGCCAGGGCCCTCCAGGTaGGCCAGGGCCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTPGPSR*ARASEQ
Trigger: CTGTTCGGAGGCCCTGGCCCACCTGGAGGGCCCTGG...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCGGCCCATGGAAGCCATaGGGGAGGATGGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: CFSGPYTQNLALASRSRVGPWKP*GRMGTH
Trigger: GTGAGTCCCCATCCTCCCCCATGGCTTCCATGGGCC...GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp CCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTCGGGCACTGCTCTaGCCCCAGTGTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PPLPVSGRILHSQFILGSPRALL*PQCPAG
Trigger: GCCCGCTGGACACTGGGGTCAGAGCAGTGCCCGAGG...GGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp ACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGCCTCGGGCACTGCTCTaGCCCCAGTGTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: TQNLALASRSRVFRSSSWPRALL*PQCPAG
Trigger: GCCCGCTGGACACTGGGGTCAGAGCAGTGCCCGAGG...CCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGCTGGGTACACACCGGTaGAAAGCCGTACTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SASLGPTPRTWPWLLAPGLGTHR*KAVLLP
Trigger: GGGCAGGAGTACGGCTTTTCACCGGTGTGTACCCAG...CCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR GCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGCGGAGCCCGCCGCGTaGCCGGAAGCGCTCGATTCC +
Preference number: 4 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHAEPAA*PEALDS
Trigger: GGAATCGAGCGCTTCCGGGCACGCGGCGGGCTCCGC...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTGGCCAGCGGACGCACTaGTCCCTGCTGTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SGLFCFSGPYTQNLALASGQRTH*SLLCQG
Trigger: GCCTTGGCACAGCAGGGAGCAGTGCGTCCGCTGGCC...AGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR GCA 90 bp TCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGGTTCCCTCGCGTACTaGCCGCTTGGGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLGPTPRTWPWLLAPGSLGSLAY*PLGVGS
Trigger: GCTTCCCACCCCAAGCGGGCAGTACGCGAGGGAACC...TAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR GCA 90 bp TCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGCCACGCCACCAGCATTaGCCAGTGCAGGCCGAATCA +
Preference number: 4 (lower is better)
Translates to: SASLGPTPRTWPWLLAPGPRHQH*PVQAES
Trigger: TGATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGG...CCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR GCA 90 bp GAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACCCGGAGTGCGTTGGGTaGGTGGTGCCCGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: EDPSQPIHPWVPFPGDVNPECVG*VVPAAR
Trigger: CCTCGCTGCGGGCACCACGCACCCAACGCACTCCGG...GTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTGGCTGCGGCCCGGAGTaGGTTGGGTGCGTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSGCGPE*VGCVVP
Trigger: GGGCACCACGCACCCAACGCACTCCGGGCCGCAGCC...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTGGCTGCGGCCCGGAGTaGGTTGGGTGCGTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PGSLDRHLGVRFHVLTAPGCGPE*VGCVVP
Trigger: GGGCACCACGCACCCAACGCACTCCGGGCCGCAGCC...AGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGCGCCGCGCCATAGCTaGGCACGAAGGCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGAPRHS*ARRPRG
Trigger: GCCTCGAGGCCTTCGTGCGCAGCTATGGCGCGGCGC...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTGGGCCGGGCACGTGGTaGCGGCCAATCGTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: YTQNLALASRSRVFRSSSGPGTW*RPIVRR
Trigger: GCGCCTGACGATTGGCCGGCACCACGTGCCCGGCCC...AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CTTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATCTAGGCTCGCTTCGCTaGCCCCCAGCGGTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: LLLSLLPCQSQGGSFTANLGSLR*PPAVVR
Trigger: CCGCACCACCGCTGGGGGGCAGCGAAGCGAGCCTAG...ATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGGACACAGCAGAACTCTaGCTGTGGGCCCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: SASLGPTPRTWPWLLAPGDTAEL*LWAHGG
Trigger: CCCTCCATGGGCCCACAGGCAGAGTTCTGCTGTGTC...CCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp TGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCAGCCAGGCTGACGAGTaGGCCCAATCCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: CSASLGPTPRTWPWLLAPSQADE*AQSPTQ
Trigger: CTGGGTGGGGGATTGGGCCCACTCGTCAGCCTGGCT...GGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR CCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCGGCTGGCCGGCTCCATaGGCTCCGGCGGACACTGCT +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRGWPAP*APADTA
Trigger: AGCAGTGTCCGCCGGAGCCCATGGAGCCGGCCAGCC...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGCTGGCCGGCTCCATaGGCTCCGGCGGACACTGCT +
Preference number: 4 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRGWPAP*APADTA
Trigger: AGCAGTGTCCGCCGGAGCCCATGGAGCCGGCCAGCC...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACGGCTGGCCGGCTCCATaGGCTCCGGCGGACACTGCT +
Preference number: 4 (lower is better)
Translates to: EDPSQPIHPWVPFPGDVNGWPAP*APADTA
Trigger: AGCAGTGTCCGCCGGAGCCCATGGAGCCGGCCAGCC...GTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CTTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATGGCTGGCCGGCTCCATaGGCTCCGGCGGACACTGCT +
Preference number: 4 (lower is better)
Translates to: LLLSLLPCQSQGGSFTANGWPAP*APADTA
Trigger: AGCAGTGTCCGCCGGAGCCCATGGAGCCGGCCAGCC...ATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTAGTGCGTTGGGTGCGTaGTGCCCGCAGCGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRSALGA*CPQRGR
Trigger: CCGACCTCGCTGCGGGCACCACGCACCCAACGCACT...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCGGCCCGGAGTGCGTTaGGTGCGTGGTGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSRPGVR*VRGARS
Trigger: GCTGCGGGCACCACGCACCCAACGCACTCCGGGCCG...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTCGGCCCGGAGTGCGTTaGGTGCGTGGTGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLRPGVR*VRGARS
Trigger: GCTGCGGGCACCACGCACCCAACGCACTCCGGGCCG...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCGGCCCGGAGTGCGTTaGGTGCGTGGTGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: FCSASSLASLREDPSQPIRPGVR*VRGARS
Trigger: GCTGCGGGCACCACGCACCCAACGCACTCCGGGCCG...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCAATGCGCAGTGCACGTaGGCTGGGCGGGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PPLPVSGRILHSQFILGSNAQCT*AGRARC
Trigger: GCACCGGGCCCGCCCAGCCCACGTGCACTGCGCATT...GGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGAATGCGCAGTGCACGTaGGCTGGGCGGGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PVSGRILHSQFILGSPSQNAQCT*AGRARC
Trigger: GCACCGGGCCCGCCCAGCCCACGTGCACTGCGCATT...CTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCAATGCGCAGTGCACGTaGGCTGGGCGGGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: AQPPPLPVSGRILHSQFINAQCT*AGRARC
Trigger: GCACCGGGCCCGCCCAGCCCACGTGCACTGCGCATT...GATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTGCCGGCTGTGGAGAGTaGGCCGGGCACGTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSAGCGE*AGHVVP
Trigger: CGGCACCACGTGCCCGGCCCACTCTCCACAGCCGGC...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTGCCGGCTGTGGAGAGTaGGCCGGGCACGTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: FCSASSLASLREDPSQPIAGCGE*AGHVVP
Trigger: CGGCACCACGTGCCCGGCCCACTCTCCACAGCCGGC...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTGCCTGTGGGACAGCTaGGCTCACAGTGGGAGACAC +
Preference number: 4 (lower is better)
Translates to: CFSGPYTQNLALASRSRVCLWDS*AHSGRH
Trigger: GTGTCTCCCACTGTGAGCCCAGCTGTCCCACAGGCA...GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGAACCCAGCAGGGGCTaGCCTGGTGGGGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLEPSRG*PGGGTG
Trigger: GCCCGTGCCCCCACCAGGCCAGCCCCTGCTGGGTTC...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCGAACCCAGCAGGGGCTaGCCTGGTGGGGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSEPSRG*PGGGTG
Trigger: GCCCGTGCCCCCACCAGGCCAGCCCCTGCTGGGTTC...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp ACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGCCCTGGGGTCCCAGGTaGATGCGGCCCACGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TQNLALASRSRVFRSSSWPWGPR*MRPTAS
Trigger: AGAGGCCGTGGGCCGCATCCACCTGGGACCCCAGGG...CCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCCCTGGGGTCCCAGGTaGATGCGGCCCACGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WPWLLAPGSLDRHLGVRFPWGPR*MRPTAS
Trigger: AGAGGCCGTGGGCCGCATCCACCTGGGACCCCAGGG...GAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGCCCTGGGGTCCCAGGTaGATGCGGCCCACGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRPWGPR*MRPTAS
Trigger: AGAGGCCGTGGGCCGCATCCACCTGGGACCCCAGGG...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCCAGGGCCCTCCAGGTaGGCCAGGGCCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: AQPPPLPVSGRILHSQFIPGPSR*ARASEQ
Trigger: CTGTTCGGAGGCCCTGGCCCACCTGGAGGGCCCTGG...GATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGGGGCAAGGAGACGGGTaGGTATGGGAACTCACCCAG +
Preference number: 4 (lower is better)
Translates to: SASLGPTPRTWPWLLAPGGQGDG*VWELTQ
Trigger: CTGGGTGAGTTCCCATACCCACCCGTCTCCTTGCCC...CCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp GGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGGGGAGCAGCCTCGGCTaGGTTCCAGGAGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: GSFTANSSLGPLPRGRQQGSSLG*VPGGHG
Trigger: TCCGTGCCCTCCTGGAACTCAGCCGAGGCTGCTCCC...CTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGGGAGCAGCCTCGGCTaGGTTCCAGGAGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGGSSLG*VPGGHG
Trigger: TCCGTGCCCTCCTGGAACTCAGCCGAGGCTGCTCCC...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp GGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAAGGGAGCAGCCTCGGCTaGGTTCCAGGAGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: GGSFTANSSLGPLPRGRQGSSLG*VPGGHG
Trigger: TCCGTGCCCTCCTGGAACTCAGCCGAGGCTGCTCCC...TTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp GCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCGGTGGGAAGCCAGGCTaGCGAGTGGGCCCAATCCCC +
Preference number: 4 (lower is better)
Translates to: AQPPPLPVSGRILHSQFIGGKPG*RVGPIP
Trigger: GGGGATTGGGCCCACTCGTCAGCCTGGCTTCCCACC...GATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp CTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCAGTCGGGCCCGGTTaGTGGCCTCACGACATAGGA +
Preference number: 4 (lower is better)
Translates to: LGCSASLGPTPRTWPWLLAVGPG*WPHDIG
Trigger: TCCTATGTCGTGAGGCCATCAACCGGGCCCGACTGC...GAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR TCA 90 bp GCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCAGGGCTTCCGGCAGATaGAGGGCAGGGTCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: AQPPPLPVSGRILHSQFIRASGR*RAGSAR
Trigger: GCGCGCTGACCCTGCCCTTCATCTGCCGGAAGCCCT...GATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp GCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCGGGCACTGCTCTaGCCCCAGTGTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: APGSLDRHLGVRFHVLTAPRALL*PQCPAG
Trigger: GCCCGCTGGACACTGGGGTCAGAGCAGTGCCCGAGG...AGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCGTGCGGGCGGTGCATaGGGGAGATGTGGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: WPWLLAPGSLDRHLGVRFRAGGA*GRCGPR
Trigger: ACGCGGACCACATCTCCCTCATGCACCGCCCGCACG...GAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp CTCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCGTAAGTCTGGGCCCCTaGAGTGTGGGCGGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LWAVLLLWALHPEPGLGFVSLGP*SVGGKP
Trigger: TGGCTTGCCGCCCACACTTCAGGGGCCCAGACTTAC...GAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp TCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCGACAGGTGGGGTGAGTaGGACAGGGCTCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SLASLREDPSQPIHPWVPDRWGE*DRALGP
Trigger: CGGGCCCAGAGCCCTGTCTCACTCACCCCACCTGTC...GGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCGCCGCCGCCGCGAGCTaGGCGAGGCAGAACGAGAGC +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFAAAAS*ARQNES
Trigger: GCTCTCGTTCTGCCTCGCGCAGCTCGCGGCGGCGGC...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CAGTCTAGGCAGGGACCCTTGCCCCCAACTCAATCCCCATCACCACAGCCAGCAGTATGCCTCCGAGTCTaGGCACTTCGGTCCGGCACG +
Preference number: 4 (lower is better)
Translates to: QSRQGPLPPTQSPSPQPAVCLRV*ALRSGT
Trigger: CGTGCCGGACCGAAGTGCGCAGACTCGGAGGCATAC...TGCTGGCTGTGGTGATGGGGATTGAGTTGGGGGCAAGGGTCCCTGCCTAGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp GCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCGCCAAGGCCAGGCGGTaGTGGGGTGAGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: AQPPPLPVSGRILHSQFIAKARR*WGESAR
Trigger: CCTGGCAGACTCACCCCAGCACCGCCTGGCCTTGGC...GATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CAGCACCAGCACAGTGGATGTCCCCACAGCTCTCAGGTTCCATGGCTAAGTTCCGGCCAGCGGACGCACTaGTCCCTGCTGTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: QHQHSGCPHSSQVPWLSSGQRTH*SLLCQG
Trigger: GCCTTGGCACAGCAGGGAGCAGTGCGTCCGCTGGCC...GGAACTTAGCCATGGAACCTGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR GCA 90 bp CTCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCGCCTCACCACACAGCTaGCCAGCCAGGAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: LWAVLLLWALHPEPGLGFASPHS*PARRGT
Trigger: TGTGCCTCTCCTGGCTGGGCAGCTGTGTGGTGAGGC...GAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp CTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCCTCACCACACAGCTaGCCAGCCAGGAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: LGCSASLGPTPRTWPWLLASPHS*PARRGT
Trigger: TGTGCCTCTCCTGGCTGGGCAGCTGTGTGGTGAGGC...GAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp CTCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCGAAGCTTCCACCCTGTaGCCGCTCAGGGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LWAVLLLWALHPEPGLGFEASTL*PLRGPL
Trigger: GAGAGGACCCCTGAGCGGGCACAGGGTGGAAGCTTC...GAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCGGCTCCGGCGGACACTaGTCAGGAGACCAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRGSGGH*SGDQSG
Trigger: CCCCGACTGGTCTCCTGAGCAGTGTCCGCCGGAGCC...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCAGGCTCCGGCGGACACTaGTCAGGAGACCAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: LLSLLPCQSQGGSFTANSGSGGH*SGDQSG
Trigger: CCCCGACTGGTCTCCTGAGCAGTGTCCGCCGGAGCC...TGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGCTCCGGCGGACACTaGTCAGGAGACCAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PVSGRILHSQFILGSPSQGSGGH*SGDQSG
Trigger: CCCCGACTGGTCTCCTGAGCAGTGTCCGCCGGAGCC...CTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTGCGTTGGGTGCGTGGTaGCCGCAGCGAGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: FCSASSLASLREDPSQPIALGAW*PQRGRG
Trigger: ACCCCGACCTCGCTGCGGGCACCACGCACCCAACGC...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTGCGTTGGGTGCGTGGTaGCCGCAGCGAGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: YTQNLALASRSRVFRSSSALGAW*PQRGRG
Trigger: ACCCCGACCTCGCTGCGGGCACCACGCACCCAACGC...AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCCGGGCCGGTCACAAGTaGCCCACTTGGGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRRAGHK*PTWVRG
Trigger: GCCCCTGACCCAAGTGGGGCACTTGTGACCGGCCCG...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGACGGGCCGGTCACAAGTaGCCCACTTGGGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGRAGHK*PTWVRG
Trigger: GCCCCTGACCCAAGTGGGGCACTTGTGACCGGCCCG...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTGCTGGGCGGGCCCGGTaGGCCGGTCACATAGGTCAG +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSAGRAR*AGHIGQ
Trigger: CTGACCTATGTGACCGGCGCACCGGGCCCGCCCAGC...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGCTGGGCGGGCCCGGTaGGCCGGTCACATAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHAGRAR*AGHIGQ
Trigger: CTGACCTATGTGACCGGCGCACCGGGCCCGCCCAGC...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTGCTGGGCGGGCCCGGTaGGCCGGTCACATAGGTCAG +
Preference number: 4 (lower is better)
Translates to: FCSASSLASLREDPSQPIAGRAR*AGHIGQ
Trigger: CTGACCTATGTGACCGGCGCACCGGGCCCGCCCAGC...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTGCGCCGCGCCATAGCTaGGCACGAAGGCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: FCSASSLASLREDPSQPIAPRHS*ARRPRG
Trigger: GCCTCGAGGCCTTCGTGCGCAGCTATGGCGCGGCGC...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTGGGCCGGGCACGTGGTaGCGGCCAATCGTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPGPGTW*RPIVRR
Trigger: GCGCCTGACGATTGGCCGGCACCACGTGCCCGGCCC...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCAGCCGGAGACCACCCTaGTCCAGAAGCAGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: SLASLREDPSQPIHPWVPSRRPP*SRSSRR
Trigger: GCGCCGGCTGCTTCTGGAGCAGGGTGGTCTCCGGCT...GGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CTTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATAGCCGGAGACCACCCTaGTCCAGAAGCAGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LLLSLLPCQSQGGSFTANSRRPP*SRSSRR
Trigger: GCGCCGGCTGCTTCTGGAGCAGGGTGGTCTCCGGCT...ATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAAGCCGGAGACCACCCTaGTCCAGAAGCAGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGSRRPP*SRSSRR
Trigger: GCGCCGGCTGCTTCTGGAGCAGGGTGGTCTCCGGCT...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCGGGGTCCCAGGTGGATaGGGCCCACGGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRGVPGG*GPRPLP
Trigger: TGGAAGAGGCCGTGGGCCGCATCCACCTGGGACCCC...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGGGGTCCCAGGTGGATaGGGCCCACGGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ASSLASLREDPSQPIHPWGVPGG*GPRPLP
Trigger: TGGAAGAGGCCGTGGGCCGCATCCACCTGGGACCCC...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGGGGGTCCCAGGTGGATaGGGCCCACGGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GSFTANSSLGPLPRGRQQGVPGG*GPRPLP
Trigger: TGGAAGAGGCCGTGGGCCGCATCCACCTGGGACCCC...CTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTACGCTTCCTCGGGCACTaGTCTGACCCCAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLGPTPRTWPWLLAPGSLRFLGH*SDPSVQ
Trigger: CTGGACACTGGGGTCAGAGCAGTGCCCGAGGAAGCG...TAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACGAGCCGGGCCGAAAGTaGGGGGTCCTGACCGCGCCG +
Preference number: 4 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHEPGRK*GVLTAP
Trigger: CGGCGCGGTCAGGACCCCGCACTTTCGGCCCGGCTC...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTGGGACGTGCGGGCGGTaGATGAGGGAGATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRGTCGR*MREMWS
Trigger: GGACCACATCTCCCTCATGCACCGCCCGCACGTCCC...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGACCCGCTGCCTTGATGTaGCGCGTGCGGAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGPAALM*RVRRAR
Trigger: CCTAGCCCTCCGCACGCGCCACATCAAGGCAGCGGG...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAAGGCACTGCGAGTCCTaGCAGGCTGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SLGPTPRTWPWLLAPGSLRHCES*QAVRLS
Trigger: GGAGAGCCTGACAGCCTGCCAGGACTCGCAGTGCCT...TAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp CCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTAGTGCGTTGGGTGCGTaGTGCCCGCAGCGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PLPVSGRILHSQFILGSPSALGA*CPQRGR
Trigger: CCGACCTCGCTGCGGGCACCACGCACCCAACGCACT...AGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGCAGCAGCAGCAGGGCTaGCCCTTCGCGTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: ASSLASLREDPSQPIHPWQQQQG*PFASPR
Trigger: CCTTGGGGACGCGAAGGGCCAGCCCTGCTGCTGCTG...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp ACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGCAGCAGCAGCAGGGCTaGCCCTTCGCGTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: TQNLALASRSRVFRSSSWQQQQG*PFASPR
Trigger: CCTTGGGGACGCGAAGGGCCAGCCCTGCTGCTGCTG...CCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGCAGCAGCAGCAGGGCTaGCCCTTCGCGTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PVSGRILHSQFILGSPSQQQQQG*PFASPR
Trigger: CCTTGGGGACGCGAAGGGCCAGCCCTGCTGCTGCTG...CTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCTTGGGTCAGGGGCCTaGGAAAAGCGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GCSASLGPTPRTWPWLLALGSGA*EKRDSS
Trigger: GCTGCTGTCGCGCTTTTCCCAGGCCCCTGACCCAAG...AGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGAGTGGGCCGGGCACGTaGTGCCGGCCAATCGTCAGG +
Preference number: 4 (lower is better)
Translates to: ASSLASLREDPSQPIHPWSGPGT*CRPIVR
Trigger: CCTGACGATTGGCCGGCACCACGTGCCCGGCCCACT...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGCAGCTGGGCTCACAGTaGGAGACACCAGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SASLGPTPRTWPWLLAPGQLGSQ*ETPGLG
Trigger: TCCAAGACCTGGTGTCTCCCACTGTGAGCCCAGCTG...CCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp TGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCGTGAGTCTAGGTCCATaGGGACTGCCTGTGGGACAG +
Preference number: 4 (lower is better)
Translates to: CFSGPYTQNLALASRSRVVSLGP*GLPVGQ
Trigger: CTGTCCCACAGGCAGTCCCCATGGACCTAGACTCAC...GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp GGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGAGAAAGGGGAGGCGGTaGCTGAGGCCGCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSFTANSSLGPLPRGRQQRKGRR*LRPLAG
Trigger: CCCAGCGAGCGGCCTCAGCCACCGCCTCCCCTTTCT...CTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCCCTGGGGTCCCAGGTaGATGCGGCCCACGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSPWGPR*MRPTAS
Trigger: AGAGGCCGTGGGCCGCATCCACCTGGGACCCCAGGG...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCCAGGCGGTGCTGGGGTaGGTCTGCCAGGTTACGGAG +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRQAVLG*VCQVTE
Trigger: CTCCGTAACCTGGCAGACTCACCCCAGCACCGCCTG...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp TACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTGGTGGGAAGCCAGGCTaGCGAGTGGGCCCAATCCCC +
Preference number: 4 (lower is better)
Translates to: YTQNLALASRSRVFRSSSGGKPG*RVGPIP
Trigger: GGGGATTGGGCCCACTCGTCAGCCTGGCTTCCCACC...AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGGCAGTCGGGCCCGGTTaGTGGCCTCACGACATAGGA +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTAVGPG*WPHDIG
Trigger: TCCTATGTCGTGAGGCCATCAACCGGGCCCGACTGC...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCAGGGCTTCCGGCAGATaGAGGGCAGGGTCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSRASGR*RAGSAR
Trigger: GCGCGCTGACCCTGCCCTTCATCTGCCGGAAGCCCT...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTGCTCCTCGGGCACTGCTCTaGCCCCAGTGTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SWSPVPCSHRSSMMTPSAPRALL*PQCPAG
Trigger: GCCCGCTGGACACTGGGGTCAGAGCAGTGCCCGAGG...AGCAGAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp GCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCCGCTTCTCGCCGCTaGTCCCAGGGAGCGGAACGA +
Preference number: 4 (lower is better)
Translates to: APGSLDRHLGVRFHVLTAPASRR*SQGAER
Trigger: TCGTTCCGCTCCCTGGGATCAGCGGCGAGAAGCGGG...AGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR GCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCAAGTCCAGCGTCTTaGGCAGGCGCACTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSPSPAS*AGALAA
Trigger: CGCCGCCAGTGCGCCTGCGCAAGACGCTGGACTTGG...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTCCAAGTCCAGCGTCTTaGGCAGGCGCACTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: YTQNLALASRSRVFRSSSPSPAS*AGALAA
Trigger: CGCCGCCAGTGCGCCTGCGCAAGACGCTGGACTTGG...AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp GCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTGCCAAGGCCAGGCGGTaGTGGGGTGAGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: APGSLDRHLGVRFHVLTAAKARR*WGESAR
Trigger: CCTGGCAGACTCACCCCAGCACCGCCTGGCCTTGGC...AGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCACACTGCTCCCTGCTGTaGCAAGGCCAGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LLSLLPCQSQGGSFTANSHCSLL*QGQAVL
Trigger: CAGCACCGCCTGGCCTTGGCACAGCAGGGAGCAGTG...TGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCCACTGCTCCCTGCTGTaGCAAGGCCAGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRHCSLL*QGQAVL
Trigger: CAGCACCGCCTGGCCTTGGCACAGCAGGGAGCAGTG...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCGGCCAGCGGACGCACTaGTCCCTGCTGTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSGQRTH*SLLCQG
Trigger: GCCTTGGCACAGCAGGGAGCAGTGCGTCCGCTGGCC...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTGGCCAGCGGACGCACTaGTCCCTGCTGTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSGQRTH*SLLCQG
Trigger: GCCTTGGCACAGCAGGGAGCAGTGCGTCCGCTGGCC...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTGGTTCCCTCGCGTACTaGCCGCTTGGGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PLPVSGRILHSQFILGSPGSLAY*PLGVGS
Trigger: GCTTCCCACCCCAAGCGGGCAGTACGCGAGGGAACC...AGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp GGTCTTGGAGGCAGGAAAGGGAGTCCGCGGCAAAGAAGAGGAAGAGCGGGTGTGCCACGCCACCAGCATTaGCCAGTGCAGGCCGAATCA +
Preference number: 4 (lower is better)
Translates to: GLGGRKGSPRQRRGRAGVPRHQH*PVQAES
Trigger: TGATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGG...CACACCCGCTCTTCCTCTTCTTTGCCGCGGACTCCCTTTCCTGCCTCCAAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp GGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTTTAGGATCCCGGCGCTaGCGGAGCTCATCTACCAGC +
Preference number: 4 (lower is better)
Translates to: GCSASLGPTPRTWPWLLALGSRR*RSSSTS
Trigger: GCTGGTAGATGAGCTCCGGCAGCGCCGGGATCCTAA...AGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR GCA 90 bp GGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAAAGGGTGCCATGCGCTTaGACGAGGGTCCCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GGSFTANSSLGPLPRGRQRVPCA*TRVPQQ
Trigger: CTGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCT...TTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCAAGGGTGCCATGCGCTTaGACGAGGGTCCCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLSLLPCQSQGGSFTANSRVPCA*TRVPQQ
Trigger: CTGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCT...TGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGGAAGCTTCCACCCTGTaGCCGCTCAGGGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTEASTL*PLRGPL
Trigger: GAGAGGACCCCTGAGCGGGCACAGGGTGGAAGCTTC...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGGCTCCGGCGGACACTaGTCAGGAGACCAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHGSGGH*SGDQSG
Trigger: CCCCGACTGGTCTCCTGAGCAGTGTCCGCCGGAGCC...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTGGCTCCGGCGGACACTaGTCAGGAGACCAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: FCSASSLASLREDPSQPIGSGGH*SGDQSG
Trigger: CCCCGACTGGTCTCCTGAGCAGTGTCCGCCGGAGCC...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCAGCGTTGGGTGCGTGGTaGCCGCAGCGAGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPALGAW*PQRGRG
Trigger: ACCCCGACCTCGCTGCGGGCACCACGCACCCAACGC...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCGCGTTGGGTGCGTGGTaGCCGCAGCGAGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFALGAW*PQRGRG
Trigger: ACCCCGACCTCGCTGCGGGCACCACGCACCCAACGC...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCCGGAGTGCGTTGGGTaGGTGGTGCCCGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHPECVG*VVPAAR
Trigger: CCTCGCTGCGGGCACCACGCACCCAACGCACTCCGG...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCGGGCCGGTCACAAGTaGCCCACTTGGGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PGSLDRHLGVRFHVLTAPRAGHK*PTWVRG
Trigger: GCCCCTGACCCAAGTGGGGCACTTGTGACCGGCCCG...AGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCGGGCCGGTCACAAGTaGCCCACTTGGGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FCSASSLASLREDPSQPIRAGHK*PTWVRG
Trigger: GCCCCTGACCCAAGTGGGGCACTTGTGACCGGCCCG...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTGCTGGGCGGGCCCGGTaGGCCGGTCACATAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCAGRAR*AGHIGQ
Trigger: CTGACCTATGTGACCGGCGCACCGGGCCCGCCCAGC...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTGCTGCTGGGCGGGCCCGGTaGGCCGGTCACATAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SWSPVPCSHRSSMMTPSAAGRAR*AGHIGQ
Trigger: CTGACCTATGTGACCGGCGCACCGGGCCCGCCCAGC...AGCAGAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTGGGCCGGGCACGTGGTaGCGGCCAATCGTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTGPGTW*RPIVRR
Trigger: GCGCCTGACGATTGGCCGGCACCACGTGCCCGGCCC...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGGGGCCGGGCACGTGGTaGCGGCCAATCGTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: VFRSSSWSPVPCSHRSSMGPGTW*RPIVRR
Trigger: GCGCCTGACGATTGGCCGGCACCACGTGCCCGGCCC...CATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CTCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCGAGTCCAGCAGGAAGTaGAGGTCGGGAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LWAVLLLWALHPEPGLGFESSRK*RSGAGT
Trigger: TGTCCCAGCTCCCGACCTGCACTTCCTGCTGGACTC...GAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGGGTCCCAGGTGGATaGGGCCCACGGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLGVPGG*GPRPLP
Trigger: TGGAAGAGGCCGTGGGCCGCATCCACCTGGGACCCC...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGGACGTGCGGGCGGTaGATGAGGGAGATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRGTCGR*MREMWS
Trigger: GGACCACATCTCCCTCATGCACCGCCCGCACGTCCC...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTGCGCATCCTGGGACGTaGGGGCGGTGCATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: YTQNLALASRSRVFRSSSAHPGT*GRCMRE
Trigger: CTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGC...AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TCTTGGAGGCAGGAAAGGGAGTCCGCGGCAAAGAAGAGGAAGAGCGGGTGTGGGGTTCACAGGTCAGCGTaGTGGTGGGGAGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SWRQERESAAKKRKSGCGVHRSA*WWGAVR
Trigger: CCTGACTGCTCCCCACCAGCACGCTGACCTGTGAAC...CCCACACCCGCTCTTCCTCTTCTTTGCCGCGGACTCCCTTTCCTGCCTCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp GGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGTCGCAGCCGCCATCTTaGCTCGGGCCTCAGACTCCG +
Preference number: 4 (lower is better)
Translates to: GSFTANSSLGPLPRGRQQSQPPS*LGPQTP
Trigger: CGGAGTCTGAGGCCCGAGCCAAGATGGCGGCTGCGA...CTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTACGAGTCCGTGAGGGTTaGCTTCGCAGCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: SLGPTPRTWPWLLAPGSLRVREG*LRSRHL
Trigger: AAGATGGCGGCTGCGAAGCCAACCCTCACGGACTCG...TAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR CCA 90 bp TGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCAAGGCCAGGCGGTGCTaGGGTGAGTCTGCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: CSASLGPTPRTWPWLLAPKARRC*GESARL
Trigger: TAACCTGGCAGACTCACCCCAGCACCGCCTGGCCTT...GGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR CCA 90 bp GCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCAGCCAGGCTGACGAGTaGGCCCAATCCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: AQPPPLPVSGRILHSQFISQADE*AQSPTQ
Trigger: CTGGGTGGGGGATTGGGCCCACTCGTCAGCCTGGCT...GATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCAAGCCAGGCTGACGAGTaGGCCCAATCCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: LLSLLPCQSQGGSFTANSSQADE*AQSPTQ
Trigger: CTGGGTGGGGGATTGGGCCCACTCGTCAGCCTGGCT...TGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGAGCCAGGCTGACGAGTaGGCCCAATCCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: PVSGRILHSQFILGSPSQSQADE*AQSPTQ
Trigger: CTGGGTGGGGGATTGGGCCCACTCGTCAGCCTGGCT...CTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp ACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGGGCCGAATCAGGCCCTaGGCACACAGGTTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TQNLALASRSRVFRSSSWGRIRP*AHRLAR
Trigger: CCTCGCCAACCTGTGTGCCCAGGGCCTGATTCGGCC...CCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CTTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATCGCACCAGGGGCTGCTaGGAGGTTGGGCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLSLLPCQSQGGSFTANRTRGC*EVGLAP
Trigger: TGGAGCTAGCCCAACCTCCCAGCAGCCCCTGGTGCG...ATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCGCACCAGGGGCTGCTaGGAGGTTGGGCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPLPVSGRILHSQFILGSRTRGC*EVGLAP
Trigger: TGGAGCTAGCCCAACCTCCCAGCAGCCCCTGGTGCG...GGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTGTCATCAGGGCCTGTaGCATAGCCCTCGGAGATCA +
Preference number: 4 (lower is better)
Translates to: CFSGPYTQNLALASRSRVCHQGL*HSPRRS
Trigger: TGATCTCCGAGGGCTATGCCACAGGCCCTGATGACA...GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCGGCTGGCCGGCTCCATaGGCTCCGGCGGACACTGCT +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFGWPAP*APADTA
Trigger: AGCAGTGTCCGCCGGAGCCCATGGAGCCGGCCAGCC...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTAGTGCGTTGGGTGCGTaGTGCCCGCAGCGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSSALGA*CPQRGR
Trigger: CCGACCTCGCTGCGGGCACCACGCACCCAACGCACT...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTAGTGCGTTGGGTGCGTaGTGCCCGCAGCGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: FCSASSLASLREDPSQPISALGA*CPQRGR
Trigger: CCGACCTCGCTGCGGGCACCACGCACCCAACGCACT...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGCGGCCCGGAGTGCGTTaGGTGCGTGGTGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: VFRSSSWSPVPCSHRSSMRPGVR*VRGARS
Trigger: GCTGCGGGCACCACGCACCCAACGCACTCCGGGCCG...CATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGCAGCAGCAGGGCTaGCCCTTCGCGTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSQQQQG*PFASPR
Trigger: CCTTGGGGACGCGAAGGGCCAGCCCTGCTGCTGCTG...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCTTGGGTCAGGGGCCTaGGAAAAGCGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRLGSGA*EKRDSS
Trigger: GCTGCTGTCGCGCTTTTCCCAGGCCCCTGACCCAAG...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCAGCTGGGACAGGGGCTaGGCCCAGCAGAGGTTCATA +
Preference number: 4 (lower is better)
Translates to: LGCSASLGPTPRTWPWLLSWDRG*AQQRFI
Trigger: TATGAACCTCTGCTGGGCCCAGCCCCTGTCCCAGCT...GAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp TCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTGCTGCTGAGGCCGCTCGCTaGGCAGGGAGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SWSPVPCSHRSSMMTPSAAEAAR*AGSWRP
Trigger: AGGCCTCCAGCTCCCTGCCCAGCGAGCGGCCTCAGC...AGCAGAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTGCTGAGGCCGCTCGCTaGGCAGGGAGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCAEAAR*AGSWRP
Trigger: AGGCCTCCAGCTCCCTGCCCAGCGAGCGGCCTCAGC...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTAGAAAGGGGAGGCGGTaGCTGAGGCCGCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: APGSLDRHLGVRFHVLTARKGRR*LRPLAG
Trigger: CCCAGCGAGCGGCCTCAGCCACCGCCTCCCCTTTCT...AGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGGACAGGCCAGGCTGCACCAGGCGACAGACCTCGCAGGGGCACCAGGTCCATACAGTGCTGAACCAATaGCAGAGCCAGGAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QDRPGCTRRQTSQGHQVHTVLNQ*QSQERS
Trigger: GCTTCTTTCCTGGCTCTGCCATTGGTTCAGCACTGT...ATGGACCTGGTGCCCCTGCGAGGTCTGTCGCCTGGTGCAGCCTGGCCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp AGGGCTTCCTACAGGGAAGAGAGGGCCTTTCAAAAGGTGGGCAACGGGCCTGGGAGGTCAGCGTGCTGGTaGGGAGCAGTCAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: RASYREERAFQKVGNGPGRSACW*GAVRTV
Trigger: CACTGTCCTGACTGCTCCCCACCAGCACGCTGACCT...CCCAGGCCCGTTGCCCACCTTTTGAAAGGCCCTCTCTTCCCTGTAGGAAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp GCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTACGAGAGCGAGTCCGTaGGGGTTGGCTTCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: APGSLDRHLGVRFHVLTATRASP*GLASQP
Trigger: CGGCTGCGAAGCCAACCCTCACGGACTCGCTCTCGT...AGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATCAGGCGGTGCTGGGGTaGGTCTGCCAGGTTACGGAG +
Preference number: 4 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHQAVLG*VCQVTE
Trigger: CTCCGTAACCTGGCAGACTCACCCCAGCACCGCCTG...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGCGGTGCTGGGGTaGGTCTGCCAGGTTACGGAG +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSQAVLG*VCQVTE
Trigger: CTCCGTAACCTGGCAGACTCACCCCAGCACCGCCTG...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACGGTGGGAAGCCAGGCTaGCGAGTGGGCCCAATCCCC +
Preference number: 4 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHGGKPG*RVGPIP
Trigger: GGGGATTGGGCCCACTCGTCAGCCTGGCTTCCCACC...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp GAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACGCAGTCGGGCCCGGTTaGTGGCCTCACGACATAGGA +
Preference number: 4 (lower is better)
Translates to: EDPSQPIHPWVPFPGDVNAVGPG*WPHDIG
Trigger: TCCTATGTCGTGAGGCCATCAACCGGGCCCGACTGC...GTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp CTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCAGCAGTCGGGCCCGGTTaGTGGCCTCACGACATAGGA +
Preference number: 4 (lower is better)
Translates to: LLSLLPCQSQGGSFTANSAVGPG*WPHDIG
Trigger: TCCTATGTCGTGAGGCCATCAACCGGGCCCGACTGC...TGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCAAGGGCTTCCGGCAGATaGAGGGCAGGGTCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPRASGR*RAGSAR
Trigger: GCGCGCTGACCCTGCCCTTCATCTGCCGGAAGCCCT...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp CTCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTTCTGCAAAGCTGCCTaGCAGCAGGGCCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LWAVLLLWALHPEPGLGFFCKAA*QQGPEE
Trigger: TTCTTCCGGGCCCTGCTGTCAGGCAGCTTTGCAGAA...GAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR TCA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCCCGCTTCTCGCCGCTaGTCCCAGGGAGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHPASRR*SQGAEL
Trigger: CAGTTCCGCTCCCTGGGATCAGCGGCGAGAAGCGGG...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp GGTCTTGGAGGCAGGAAAGGGAGTCCGCGGCAAAGAAGAGGAAGAGCGGGTGTGCTAGCAGTAACGCCATaGAGCAGCCTGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLGGRKGSPRQRRGRAGVLAVTP*SSLWSG
Trigger: CCCTGACCACAGGCTGCTTCATGGCGTTACTGCTAG...CACACCCGCTCTTCCTCTTCTTTGCCGCGGACTCCCTTTCCTGCCTCCAAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp TGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCGGGACGCTGGGAACCTaGGGTCCAGGACAAGGACAG +
Preference number: 4 (lower is better)
Translates to: WPWLLAPGSLDRHLGVRFGTLGT*GPGQGQ
Trigger: CTGTCCTTGTCCTGGACCTCAGGTTCCCAGCGTCCC...GAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp GGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGGTATGCCTCCGAGTCTaGGCACTTCGGTCCGGCACG +
Preference number: 4 (lower is better)
Translates to: GSFTANSSLGPLPRGRQQVCLRV*ALRSGT
Trigger: CGTGCCGGACCGAAGTGCGCAGACTCGGAGGCATAC...CTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp GCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCGTATGCCTCCGAGTCTaGGCACTTCGGTCCGGCACG +
Preference number: 4 (lower is better)
Translates to: AQPPPLPVSGRILHSQFIVCLRV*ALRSGT
Trigger: CGTGCCGGACCGAAGTGCGCAGACTCGGAGGCATAC...GATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp GAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACGTATGCCTCCGAGTCTaGGCACTTCGGTCCGGCACG +
Preference number: 4 (lower is better)
Translates to: EDPSQPIHPWVPFPGDVNVCLRV*ALRSGT
Trigger: CGTGCCGGACCGAAGTGCGCAGACTCGGAGGCATAC...GTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCAGCCAAGGCCAGGCGGTaGTGGGGTGAGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPAKARR*WGESAR
Trigger: CCTGGCAGACTCACCCCAGCACCGCCTGGCCTTGGC...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp GGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGCCACCCAGACTTAGCTaGTCAGCACAGGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GSFTANSSLGPLPRGRQQPPRLS*SAQARE
Trigger: CTCCCGGGCCTGTGCTGAGCAGCTAAGTCTGGGTGG...CTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGCCACCCAGACTTAGCTaGTCAGCACAGGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: ASSLASLREDPSQPIHPWPPRLS*SAQARE
Trigger: CTCCCGGGCCTGTGCTGAGCAGCTAAGTCTGGGTGG...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGACCACCCAGACTTAGCTaGTCAGCACAGGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGPPRLS*SAQARE
Trigger: CTCCCGGGCCTGTGCTGAGCAGCTAAGTCTGGGTGG...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGACCAGCATTGCCCAGTaGAGGCCGAATCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTTSIAQ*RPNQAL
Trigger: CAGGGCCTGATTCGGCCTGCACTGGGCAATGCTGGT...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCAGCCTCACCACACAGCTaGCCAGCCAGGAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: LLSLLPCQSQGGSFTANSASPHS*PARRGT
Trigger: TGTGCCTCTCCTGGCTGGGCAGCTGTGTGGTGAGGC...TGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp ACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGGCCTCACCACACAGCTaGCCAGCCAGGAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: TQNLALASRSRVFRSSSWASPHS*PARRGT
Trigger: TGTGCCTCTCCTGGCTGGGCAGCTGTGTGGTGAGGC...CCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGAAGCTTCCACCCTGTaGCCGCTCAGGGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGEASTL*PLRGPL
Trigger: GAGAGGACCCCTGAGCGGGCACAGGGTGGAAGCTTC...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTAGCCGGAGACCACCCTaGTCCAGAAGCAGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCSRRPP*SRSSRR
Trigger: GCGCCGGCTGCTTCTGGAGCAGGGTGGTCTCCGGCT...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCGCTTCCTCGGGCACTaGTCTGACCCCAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: WPWLLAPGSLDRHLGVRFRFLGH*SDPSVQ
Trigger: CTGGACACTGGGGTCAGAGCAGTGCCCGAGGAAGCG...GAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACCGCTTCCTCGGGCACTaGTCTGACCCCAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: EDPSQPIHPWVPFPGDVNRFLGH*SDPSVQ
Trigger: CTGGACACTGGGGTCAGAGCAGTGCCCGAGGAAGCG...GTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGCCCTGCCTCTTCACCTaGTGCCTCCACAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GSFTANSSLGPLPRGRQQPCLFT*CLHKPH
Trigger: GTGGGGCTTGTGGAGGCAGCAGGTGAAGAGGCAGGG...CTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CTCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCCTAGGCAGGGACCCTTaGCCCCAACTCAATCCCCAT +
Preference number: 4 (lower is better)
Translates to: LWAVLLLWALHPEPGLGFLGRDP*PQLNPH
Trigger: ATGGGGATTGAGTTGGGGGCAAGGGTCCCTGCCTAG...GAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp TCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTACTAGGCAGGGACCCTTaGCCCCAACTCAATCCCCAT +
Preference number: 4 (lower is better)
Translates to: SLGPTPRTWPWLLAPGSLLGRDP*PQLNPH
Trigger: ATGGGGATTGAGTTGGGGGCAAGGGTCCCTGCCTAG...TAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp TCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTGGCTCTGGGCTGTTCTaGTTCTCTGGGCCCTACACC +
Preference number: 4 (lower is better)
Translates to: SGLFCFSGPYTQNLALASGSGLF*FSGPYT
Trigger: GGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAGCC...AGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp GCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTGGGACTGGAACGCCCTaGTCCCCACCCCACTCTGGT +
Preference number: 4 (lower is better)
Translates to: APGSLDRHLGVRFHVLTAGTGTP*SPPHSG
Trigger: ACCAGAGTGGGGTGGGGAGCAGGGCGTTCCAGTCCC...AGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp GCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTTCGCAGCCGCCATCTTaGCTCGGGCCTCAGACTCCG +
Preference number: 4 (lower is better)
Translates to: APGSLDRHLGVRFHVLTASQPPS*LGPQTP
Trigger: CGGAGTCTGAGGCCCGAGCCAAGATGGCGGCTGCGA...AGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTATGTCTCGTTGGTCGCTaGGTCCTTTTCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SLGPTPRTWPWLLAPGSLCLVGR*VLFPTQ
Trigger: CTGGGTGGGGAAAAGGACCCAGCGACCAACGAGACA...TAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR CCA 90 bp GGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTTCAGGGGTGTCTCGTTaGTCGCTGGGTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: GCSASLGPTPRTWPWLLASGVSR*SLGPFP
Trigger: GGGAAAAGGACCCAGCGACCAACGAGACACCCCTGA...AGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR CCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCACCCGCTGCCTTGATGTaGCGCGTGCGGAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPPAALM*RVRRAR
Trigger: CCTAGCCCTCCGCACGCGCCACATCAAGGCAGCGGG...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCCTTGCGCAGGCGCACTaGCGGCGTAGGACTAGACGA +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRLAQAH*RRRTRR
Trigger: TCGTCTAGTCCTACGCCGCCAGTGCGCCTGCGCAAG...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CTTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATCTTGCGCAGGCGCACTaGCGGCGTAGGACTAGACGA +
Preference number: 4 (lower is better)
Translates to: LLLSLLPCQSQGGSFTANLAQAH*RRRTRR
Trigger: TCGTCTAGTCCTACGCCGCCAGTGCGCCTGCGCAAG...ATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAAGGCACTGCGAGTCCTaGCAGGCTGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGRHCES*QAVRLS
Trigger: GGAGAGCCTGACAGCCTGCCAGGACTCGCAGTGCCT...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCACTGCCCGCTTGGGGTaGGAAGCCAGGCTGACGAGT +
Preference number: 4 (lower is better)
Translates to: WPWLLAPGSLDRHLGVRFTARLG*EARLTS
Trigger: ACTCGTCAGCCTGGCTTCCCACCCCAAGCGGGCAGT...GAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCACTGCCCGCTTGGGGTaGGAAGCCAGGCTGACGAGT +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRTARLG*EARLTS
Trigger: ACTCGTCAGCCTGGCTTCCCACCCCAAGCGGGCAGT...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGGCCGAATCAGGCCCTaGGCACACAGGTTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHGRIRP*AHRLAR
Trigger: CCTCGCCAACCTGTGTGCCCAGGGCCTGATTCGGCC...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTGGCCGAATCAGGCCCTaGGCACACAGGTTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSGRIRP*AHRLAR
Trigger: CCTCGCCAACCTGTGTGCCCAGGGCCTGATTCGGCC...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGCCGAATCAGGCCCTaGGCACACAGGTTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLGRIRP*AHRLAR
Trigger: CCTCGCCAACCTGTGTGCCCAGGGCCTGATTCGGCC...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp ATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGTCCGCACCAGGGGCTGCTaGGAGGTTGGGCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ILHSQFILGSPSQGTSTVRTRGC*EVGLAP
Trigger: TGGAGCTAGCCCAACCTCCCAGCAGCCCCTGGTGCG...GACTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCAGTGGGCCGGGCACGTaGTGCCGGCCAATCGTCAGG +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFSGPGT*CRPIVR
Trigger: CCTGACGATTGGCCGGCACCACGTGCCCGGCCCACT...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTGCTAGTGGGCCGGGCACGTaGTGCCGGCCAATCGTCAGG +
Preference number: 4 (lower is better)
Translates to: SWSPVPCSHRSSMMTPSASGPGT*CRPIVR
Trigger: CCTGACGATTGGCCGGCACCACGTGCCCGGCCCACT...AGCAGAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTAGTGGGCCGGGCACGTaGTGCCGGCCAATCGTCAGG +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCSGPGT*CRPIVR
Trigger: CCTGACGATTGGCCGGCACCACGTGCCCGGCCCACT...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGAGCTGGGACAGGGGCTaGGCCCAGCAGAGGTTCATA +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTSWDRG*AQQRFI
Trigger: TATGAACCTCTGCTGGGCCCAGCCCCTGTCCCAGCT...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCAAGAAAGGGGAGGCGGTaGCTGAGGCCGCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPRKGRR*LRPLAG
Trigger: CCCAGCGAGCGGCCTCAGCCACCGCCTCCCCTTTCT...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCCCAGAACCTGGCCTTaGCTTCTCGCTCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: WPWLLAPGSLDRHLGVRFPRTWP*LLAPGS
Trigger: AGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG...GAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTAGGCACCTGGGGCTCTaGGCTGTTCTGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SGLFCFSGPYTQNLALASRHLGL*AVLLLW
Trigger: CCAGAGAAGCAGAACAGCCCAGAGCCCCAGGTGCCT...AGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGATTCCGTTTCCGGAGCTaGACCCCGGTGTCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGFRFRS*TPVSRV
Trigger: CACTCGGGACACCGGGGTCCAGCTCCGGAAACGGAA...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGAATCGCAGCGCATCCTaGGACGTGCGGGCGGTGCAT +
Preference number: 4 (lower is better)
Translates to: ASSLASLREDPSQPIHPWNRSAS*DVRAVH
Trigger: ATGCACCGCCCGCACGTCCCAGGATGCGCTGCGATT...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp AGGGCTTCCTACAGGGAAGAGAGGGCCTTTCAAAAGGTGGGCAACGGGCCTGGGCCCAGGGAGCGGAACTaGAAGACAGGGAAATCGTCG +
Preference number: 4 (lower is better)
Translates to: RASYREERAFQKVGNGPGPRERN*KTGKSS
Trigger: CGACGATTTCCCTGTCTTCCAGTTCCGCTCCCTGGG...CCCAGGCCCGTTGCCCACCTTTTGAAAGGCCCTCTCTTCCCTGTAGGAAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp CTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCAGGATGGGGACTCACATaGGGGCAAGGAGACGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLSLLPCQSQGGSFTANSGWGLT*GQGDGW
Trigger: CCACCCGTCTCCTTGCCCCCATGTGAGTCCCCATCC...TGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTCTGGAGGACGGGCTaGGGAGGACAGGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHVWRTG*GGQVSG
Trigger: CCCACTCACCTGTCCTCCCCAGCCCGTCCTCCAGAC...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCTGCCTGTGGGCCCATaGAGGGACTGGAACGCCCTG +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSLPVGP*RDWNAL
Trigger: CAGGGCGTTCCAGTCCCTCCATGGGCCCACAGGCAG...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGGCAGAACTCTGCCTGTaGGCCCATGGAGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTAELCL*AHGGTG
Trigger: TCCAGTCCCTCCATGGGCCCACAGGCAGAGTTCTGC...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTAATCGGCTAGGATGCTaGGCGCCAAGTCCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRNRLGC*APSPAS
Trigger: AGACGCTGGACTTGGCGCTCAGCATCCTAGCCGATT...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCCAGGCGGTGCTGGGGTaGGTCTGCCAGGTTACGGAG +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFQAVLG*VCQVTE
Trigger: CTCCGTAACCTGGCAGACTCACCCCAGCACCGCCTG...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGAGATCAGCCACGACCTaGGGCTCCGGAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRRSATT*GSGSFH
Trigger: GTGGAAGCTTCCGGAGCCTCAGGTCGTGGCTGATCT...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCAGATCAGCCACGACCTaGGGCTCCGGAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: WPWLLAPGSLDRHLGVRFRSATT*GSGSFH
Trigger: GTGGAAGCTTCCGGAGCCTCAGGTCGTGGCTGATCT...GAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp GCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCAGATCAGCCACGACCTaGGGCTCCGGAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: AQPPPLPVSGRILHSQFIRSATT*GSGSFH
Trigger: GTGGAAGCTTCCGGAGCCTCAGGTCGTGGCTGATCT...GATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp ACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGGTTGCAGGTGAGGCGTaGCAGAATGCGCAGTGCACG +
Preference number: 4 (lower is better)
Translates to: TQNLALASRSRVFRSSSWVAGEA*QNAQCT
Trigger: CGTGCACTGCGCATTCTGTCACGCCTCACCTGCAAC...CCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGTTGCAGGTGAGGCGTaGCAGAATGCGCAGTGCACG +
Preference number: 4 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRVAGEA*QNAQCT
Trigger: CGTGCACTGCGCATTCTGTCACGCCTCACCTGCAAC...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp GGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAAAGGCAGGGTTGCAGGTaGGGCGTGACAGAATGCGCA +
Preference number: 4 (lower is better)
Translates to: GGSFTANSSLGPLPRGRQRQGCR*GVTECA
Trigger: TGCGCATTCTGTCACGCCTCACCTGCAACCCTGCCT...TTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp GCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCAGGCAGGGTTGCAGGTaGGGCGTGACAGAATGCGCA +
Preference number: 4 (lower is better)
Translates to: AQPPPLPVSGRILHSQFIRQGCR*GVTECA
Trigger: TGCGCATTCTGTCACGCCTCACCTGCAACCCTGCCT...GATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTAAGGGCGACTCAGCCTaGACCGTCAGGTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SGLFCFSGPYTQNLALASKGDSA*TVRFCS
Trigger: ACTGCAGAACCTGACGGTTCAGGCTGAGTCGCCCTT...AGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR TCA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTAGGGCTTCCGGCAGATaGAGGGCAGGGTCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTRASGR*RAGSAR
Trigger: GCGCGCTGACCCTGCCCTTCATCTGCCGGAAGCCCT...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp ACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGCCTGATGCTTGGTGGTaGGTGTGGCCAGACCTTCGG +
Preference number: 4 (lower is better)
Translates to: TQNLALASRSRVFRSSSWPDAWW*VWPDLR
Trigger: CCGAAGGTCTGGCCACACTCACCACCAAGCATCAGG...CCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR TCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTTCTGGGCCCGTGAGATaGAGGAGGGTGAAACCTCTG +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRSGPVR*RRVKPL
Trigger: CAGAGGTTTCACCCTCCTTCATCTCACGGGCCCAGA...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCACTCACCGGCAGATaGAGGGCAGGGTCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTPLTGR*RAGSAR
Trigger: GCGCGCTGACCCTGCCCTTCATCTGCCGGTGAGTGG...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTCCCGCTTCTCGCCGCTaGTCCCAGGGAGCGGAACTT +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCPASRR*SQGAEL
Trigger: AAGTTCCGCTCCCTGGGATCAGCGGCGAGAAGCGGG...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563544.5
CDS-3UTR GCA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCAAGTCCAGCGTCTTaGGCAGGCGCACTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTPSPAS*AGALAA
Trigger: CGCCGCCAGTGCGCCTGCGCAAGACGCTGGACTTGG...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCACACTGCTCCCTGCTGTaGCAAGGCCAGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPHCSLL*QGQAVL
Trigger: CAGCACCGCCTGGCCTTGGCACAGCAGGGAGCAGTG...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTCACTGCTCCCTGCTGTaGCAAGGCCAGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCHCSLL*QGQAVL
Trigger: CAGCACCGCCTGGCCTTGGCACAGCAGGGAGCAGTG...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TCCAAATTGTTTAATCTCAATTCCAGAGGTCTAGGCCAGGCCAGGCACCTGGGGGGCCAGCGGACGCACTaGTCCCTGCTGTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SKLFNLNSRGLGQARHLGGQRTH*SLLCQG
Trigger: GCCTTGGCACAGCAGGGAGCAGTGCGTCCGCTGGCC...CCCCAGGTGCCTGGCCTGGCCTAGACCTCTGGAATTGAGATTAAACAATTTGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268314.9
ENST00000457010.6
CDS-3UTR GCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCGGTTCCCTCGCGTACTaGCCGCTTGGGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFGSLAY*PLGVGS
Trigger: GCTTCCCACCCCAAGCGGGCAGTACGCGAGGGAACC...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTACCAGCATTGCCCAGTaGAGGCCGAATCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PLPVSGRILHSQFILGSPTSIAQ*RPNQAL
Trigger: CAGGGCCTGATTCGGCCTGCACTGGGCAATGCTGGT...AGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGACCAGCATTGCCCAGTaGAGGCCGAATCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRTSIAQ*RPNQAL
Trigger: CAGGGCCTGATTCGGCCTGCACTGGGCAATGCTGGT...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGACCAGCATTGCCCAGTaGAGGCCGAATCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PVSGRILHSQFILGSPSQTSIAQ*RPNQAL
Trigger: CAGGGCCTGATTCGGCCTGCACTGGGCAATGCTGGT...CTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTCCACGCCACCAGCATTaGCCAGTGCAGGCCGAATCA +
Preference number: 4 (lower is better)
Translates to: PLPVSGRILHSQFILGSPPRHQH*PVQAES
Trigger: TGATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGG...AGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCACCACGCCACCAGCATTaGCCAGTGCAGGCCGAATCA +
Preference number: 4 (lower is better)
Translates to: LLSLLPCQSQGGSFTANSPRHQH*PVQAES
Trigger: TGATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGG...TGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTTAGGATCCCGGCGCTaGCGGAGCTCATCTACCAGC +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRLGSRR*RSSSTS
Trigger: GCTGGTAGATGAGCTCCGGCAGCGCCGGGATCCTAA...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp GGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAATTAGGATCCCGGCGCTaGCGGAGCTCATCTACCAGC +
Preference number: 4 (lower is better)
Translates to: GGSFTANSSLGPLPRGRQLGSRR*RSSSTS
Trigger: GCTGGTAGATGAGCTCCGGCAGCGCCGGGATCCTAA...TTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTTAGGATCCCGGCGCTaGCGGAGCTCATCTACCAGC +
Preference number: 4 (lower is better)
Translates to: PLPVSGRILHSQFILGSPLGSRR*RSSSTS
Trigger: GCTGGTAGATGAGCTCCGGCAGCGCCGGGATCCTAA...AGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTAGGGTGCCATGCGCTTaGACGAGGGTCCCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCRVPCA*TRVPQQ
Trigger: CTGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCT...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCAATACGAGGGTGCCATaGGCTTGCACGAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PPLPVSGRILHSQFILGSNTRVP*ACTRVP
Trigger: CGGGACCCTCGTGCAAGCGCATGGCACCCTCGTATT...GGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCGCCACAATACGAGGGTaGCATGCGCTTGCACGAGGG +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRATIRG*HALARG
Trigger: CCCTCGTGCAAGCGCATGGCACCCTCGTATTGTGGC...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTGAAGCTTCCACCCTGTaGCCGCTCAGGGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSEASTL*PLRGPL
Trigger: GAGAGGACCCCTGAGCGGGCACAGGGTGGAAGCTTC...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCGAGTCCAGCAGGAAGTaGAGGTCGGGAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRESSRK*RSGAGT
Trigger: TGTCCCAGCTCCCGACCTGCACTTCCTGCTGGACTC...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGTGCCTCTTCACCTGCTaGCTCCACAAGCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRCLFTC*LHKPHQ
Trigger: CTGGTGGGGCTTGTGGAGGCAGCAGGTGAAGAGGCA...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAATGCCTCTTCACCTGCTaGCTCCACAAGCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: GGSFTANSSLGPLPRGRQCLFTC*LHKPHQ
Trigger: CTGGTGGGGCTTGTGGAGGCAGCAGGTGAAGAGGCA...TTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTCCCTGCCTCTTCACCTaGTGCCTCCACAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLPCLFT*CLHKPH
Trigger: GTGGGGCTTGTGGAGGCAGCAGGTGAAGAGGCAGGG...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCCCTGCCTCTTCACCTaGTGCCTCCACAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSPCLFT*CLHKPH
Trigger: GTGGGGCTTGTGGAGGCAGCAGGTGAAGAGGCAGGG...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCTAGGCAGGGACCCTTaGCCCCAACTCAATCCCCAT +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRLGRDP*PQLNPH
Trigger: ATGGGGATTGAGTTGGGGGCAAGGGTCCCTGCCTAG...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCCATGATGACTCCTTCTaGTCAGCCTCCTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: CSASLGPTPRTWPWLLAPHDDSF*SASSLA
Trigger: GGCAAGGGAGGAGGCTGAGCAGAAGGAGTCATCATG...GGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp GCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCATGATGACTCCTTCTaGTCAGCCTCCTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: AVLLLWALHPEPGLGFSLHDDSF*SASSLA
Trigger: GGCAAGGGAGGAGGCTGAGCAGAAGGAGTCATCATG...GAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp CTCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCCATGATGACTCCTTCTaGTCAGCCTCCTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LWAVLLLWALHPEPGLGFHDDSF*SASSLA
Trigger: GGCAAGGGAGGAGGCTGAGCAGAAGGAGTCATCATG...GAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp GGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAAGGCTCTGGGCTGTTCTaGTTCTCTGGGCCCTACACC +
Preference number: 4 (lower is better)
Translates to: GGSFTANSSLGPLPRGRQGSGLF*FSGPYT
Trigger: GGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAGCC...TTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp CTCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTGCACAGTTGGAATCTaGTGCGGCACCAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: LWAVLLLWALHPEPGLGFCTVGI*CGTSTV
Trigger: GACTGTGCTGGTGCCGCAGCAGATTCCAACTGTGCA...GAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR GCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGACCGGAAGTCTGTCCTTaGACACGAGGCGCGGCAGTA +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGPEVCP*TRGAAV
Trigger: TACTGCCGCGCCTCGTGTGCAAGGACAGACTTCCGG...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTCGCAGCCGCCATCTTaGCTCGGGCCTCAGACTCCG +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFSQPPS*LGPQTP
Trigger: CGGAGTCTGAGGCCCGAGCCAAGATGGCGGCTGCGA...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CTTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATCGAGTCCGTGAGGGTTaGCTTCGCAGCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: LLLSLLPCQSQGGSFTANRVREG*LRSRHL
Trigger: AAGATGGCGGCTGCGAAGCCAACCCTCACGGACTCG...ATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp GTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGCCCGCTGCCTTGATGTaGCGCGTGCGGAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: VFRSSSWSPVPCSHRSSMPAALM*RVRRAR
Trigger: CCTAGCCCTCCGCACGCGCCACATCAAGGCAGCGGG...CATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGAAGGCCAGGCGGTGCTaGGGTGAGTCTGCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: ASSLASLREDPSQPIHPWKARRC*GESARL
Trigger: TAACCTGGCAGACTCACCCCAGCACCGCCTGGCCTT...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGAAGGCCAGGCGGTGCTaGGGTGAGTCTGCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: PVSGRILHSQFILGSPSQKARRC*GESARL
Trigger: TAACCTGGCAGACTCACCCCAGCACCGCCTGGCCTT...CTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTTGGCGAGGATCAGAATaGTTCCCTCGCGTACTGCCC +
Preference number: 4 (lower is better)
Translates to: SGLFCFSGPYTQNLALASWRGSE*FPRVLP
Trigger: GGGCAGTACGCGAGGGAACCATTCTGATCCTCGCCA...AGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR CCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTGGCGAGGATCAGAATaGTTCCCTCGCGTACTGCCC +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTWRGSE*FPRVLP
Trigger: GGGCAGTACGCGAGGGAACCATTCTGATCCTCGCCA...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTCGCACCAGGGGCTGCTaGGAGGTTGGGCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPRTRGC*EVGLAP
Trigger: TGGAGCTAGCCCAACCTCCCAGCAGCCCCTGGTGCG...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCTTGGGTCAGGGGCCTaGGAAAAGCGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSLGSGA*EKRDSS
Trigger: GCTGCTGTCGCGCTTTTCCCAGGCCCCTGACCCAAG...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCCAAATTGTTTAATCTCAATTCCAGAGGTCTAGGCCAGGCCAGGCACCTGGGGAGTGGGCCGGGCACGTaGTGCCGGCCAATCGTCAGG +
Preference number: 4 (lower is better)
Translates to: SKLFNLNSRGLGQARHLGSGPGT*CRPIVR
Trigger: CCTGACGATTGGCCGGCACCACGTGCCCGGCCCACT...CCCCAGGTGCCTGGCCTGGCCTAGACCTCTGGAATTGAGATTAAACAATTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGTGCCTGTGGGACAGCTaGGCTCACAGTGGGAGACAC +
Preference number: 4 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRCLWDS*AHSGRH
Trigger: GTGTCTCCCACTGTGAGCCCAGCTGTCCCACAGGCA...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGATGCCTGTGGGACAGCTaGGCTCACAGTGGGAGACAC +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGCLWDS*AHSGRH
Trigger: GTGTCTCCCACTGTGAGCCCAGCTGTCCCACAGGCA...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGACATGGGGACTGCCTGTaGGACAGCTGGGCTCACAGT +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGHGDCL*DSWAHS
Trigger: ACTGTGAGCCCAGCTGTCCCACAGGCAGTCCCCATG...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCCATGGGGACTGCCTGTaGGACAGCTGGGCTCACAGT +
Preference number: 4 (lower is better)
Translates to: SLASLREDPSQPIHPWVPHGDCL*DSWAHS
Trigger: ACTGTGAGCCCAGCTGTCCCACAGGCAGTCCCCATG...GGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGAGCTGGGACAGGGGCTaGGCCCAGCAGAGGTTCATA +
Preference number: 4 (lower is better)
Translates to: PVSGRILHSQFILGSPSQSWDRG*AQQRFI
Trigger: TATGAACCTCTGCTGGGCCCAGCCCCTGTCCCAGCT...CTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGAGCTGGGACAGGGGCTaGGCCCAGCAGAGGTTCATA +
Preference number: 4 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRSWDRG*AQQRFI
Trigger: TATGAACCTCTGCTGGGCCCAGCCCCTGTCCCAGCT...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTAGAAAGGGGAGGCGGTaGCTGAGGCCGCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTRKGRR*LRPLAG
Trigger: CCCAGCGAGCGGCCTCAGCCACCGCCTCCCCTTTCT...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTGGCACCAGGTCCATCTaGGCTTCTGCAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRGTRSI*ASAKLP
Trigger: AGGCAGCTTTGCAGAAGCCCAGATGGACCTGGTGCC...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCCAGAACCTGGCCTTaGCTTCTCGCTCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: PGSLDRHLGVRFHVLTAPPRTWP*LLAPGS
Trigger: AGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG...AGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTCCCAGAACCTGGCCTTaGCTTCTCGCTCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLPRTWP*LLAPGS
Trigger: AGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCCAGAACCTGGCCTTaGCTTCTCGCTCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSPRTWP*LLAPGS
Trigger: AGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATCCCAGAACCTGGCCTTaGCTTCTCGCTCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHPRTWP*LLAPGS
Trigger: AGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTAGGCACCTGGGGCTCTaGGCTGTTCTGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PLPVSGRILHSQFILGSPRHLGL*AVLLLW
Trigger: CCAGAGAAGCAGAACAGCCCAGAGCCCCAGGTGCCT...AGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCAGGCACCTGGGGCTCTaGGCTGTTCTGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRRHLGL*AVLLLW
Trigger: CCAGAGAAGCAGAACAGCCCAGAGCCCCAGGTGCCT...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATTTCCGTTTCCGGAGCTaGACCCCGGTGTCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHFRFRS*TPVSRV
Trigger: CACTCGGGACACCGGGGTCCAGCTCCGGAAACGGAA...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGGAGACGGGTGGGTATaGGAACTCACCCAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: ASSLASLREDPSQPIHPWGDGWV*ELTQLS
Trigger: CGAGAGCTGGGTGAGTTCCCATACCCACCCGTCTCC...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGAGGTTCTGGGCCCATaGAAGCCATGGGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: ASSLASLREDPSQPIHPWEVLGP*KPWGRM
Trigger: CATCCTCCCCCATGGCTTCCATGGGCCCAGAACCTC...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCTGGGCTCGGGACGCTaGGAACCTGAGGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHLGSGR*EPEVQD
Trigger: GTCCTGGACCTCAGGTTCCCAGCGTCCCGAGCCCAG...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp TCCAAATTGTTTAATCTCAATTCCAGAGGTCTAGGCCAGGCCAGGCACCTGGGGACGAGAGCGAGTCCGTaGGGGTTGGCTTCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SKLFNLNSRGLGQARHLGTRASP*GLASQP
Trigger: CGGCTGCGAAGCCAACCCTCACGGACTCGCTCTCGT...CCCCAGGTGCCTGGCCTGGCCTAGACCTCTGGAATTGAGATTAAACAATTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268314.9
ENST00000457010.6
CDS-3UTR TCA 90 bp TACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTAGATCAGCCACGACCTaGGGCTCCGGAAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: YTQNLALASRSRVFRSSSRSATT*GSGSFH
Trigger: GTGGAAGCTTCCGGAGCCTCAGGTCGTGGCTGATCT...AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTGTTGCAGGTGAGGCGTaGCAGAATGCGCAGTGCACG +
Preference number: 4 (lower is better)
Translates to: FCSASSLASLREDPSQPIVAGEA*QNAQCT
Trigger: CGTGCACTGCGCATTCTGTCACGCCTCACCTGCAAC...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp CCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTAGGCAGGGTTGCAGGTaGGGCGTGACAGAATGCGCA +
Preference number: 4 (lower is better)
Translates to: PGSLDRHLGVRFHVLTAPRQGCR*GVTECA
Trigger: TGCGCATTCTGTCACGCCTCACCTGCAACCCTGCCT...AGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCAGGCAGGGTTGCAGGTaGGGCGTGACAGAATGCGCA +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSRQGCR*GVTECA
Trigger: TGCGCATTCTGTCACGCCTCACCTGCAACCCTGCCT...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGAAGGGCGACTCAGCCTaGACCGTCAGGTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ASSLASLREDPSQPIHPWKGDSA*TVRFCS
Trigger: ACTGCAGAACCTGACGGTTCAGGCTGAGTCGCCCTT...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCTTCTGCAAAGCTGCCTaGCAGCAGGGCCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: WPWLLAPGSLDRHLGVRFFCKAA*QQGPEE
Trigger: TTCTTCCGGGCCCTGCTGTCAGGCAGCTTTGCAGAA...GAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp GGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGTTCTGCAAAGCTGCCTaGCAGCAGGGCCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: GSFTANSSLGPLPRGRQQFCKAA*QQGPEE
Trigger: TTCTTCCGGGCCCTGCTGTCAGGCAGCTTTGCAGAA...CTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp GCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCTGCCGCTTCCTAGAGTaGCGGGCTTGTGGAATTTTC +
Preference number: 4 (lower is better)
Translates to: AVLLLWALHPEPGLGFSLCRFLE*RACGIF
Trigger: GAAAATTCCACAAGCCCGTCACTCTAGGAAGCGGCA...GAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408912.7
ENST00000457010.6
CDS-3UTR TCA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGCAGTCAGGACAGTGCTaGACCAATGGCAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRQSGQC*TNGRAR
Trigger: CCTGGCTCTGCCATTGGTTCAGCACTGTCCTGACTG...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp TCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTGCTCCACCCAGACTTAGCTaGTCAGCACAGGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SWSPVPCSHRSSMMTPSAPPRLS*SAQARE
Trigger: CTCCCGGGCCTGTGCTGAGCAGCTAAGTCTGGGTGG...AGCAGAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTAATACGAGGGTGCCATaGGCTTGCACGAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLNTRVP*ACTRVP
Trigger: CGGGACCCTCGTGCAAGCGCATGGCACCCTCGTATT...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCAATACGAGGGTGCCATaGGCTTGCACGAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSNTRVP*ACTRVP
Trigger: CGGGACCCTCGTGCAAGCGCATGGCACCCTCGTATT...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTGAAGCTTCCACCCTGTaGCCGCTCAGGGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPEASTL*PLRGPL
Trigger: GAGAGGACCCCTGAGCGGGCACAGGGTGGAAGCTTC...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTGAGTCCAGCAGGAAGTaGAGGTCGGGAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: FCSASSLASLREDPSQPIESSRK*RSGAGT
Trigger: TGTCCCAGCTCCCGACCTGCACTTCCTGCTGGACTC...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTGAGTCCAGCAGGAAGTaGAGGTCGGGAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: APGSLDRHLGVRFHVLTAESSRK*RSGAGT
Trigger: TGTCCCAGCTCCCGACCTGCACTTCCTGCTGGACTC...AGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTCGCTTCCTCGGGCACTaGTCTGACCCCAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPRFLGH*SDPSVQ
Trigger: CTGGACACTGGGGTCAGAGCAGTGCCCGAGGAAGCG...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCCCTGCCTCTTCACCTaGTGCCTCCACAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHPCLFT*CLHKPH
Trigger: GTGGGGCTTGTGGAGGCAGCAGGTGAAGAGGCAGGG...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCACCCTGCCTCTTCACCTaGTGCCTCCACAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPPCLFT*CLHKPH
Trigger: GTGGGGCTTGTGGAGGCAGCAGGTGAAGAGGCAGGG...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGCATGATGACTCCTTCTaGTCAGCCTCCTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTHDDSF*SASSLA
Trigger: GGCAAGGGAGGAGGCTGAGCAGAAGGAGTCATCATG...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCAGCACTGAAGAGACAGTaGTGGGCTCGGGACGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPALKRQ*WARDAG
Trigger: CCCAGCGTCCCGAGCCCAGCACTGTCTCTTCAGTGC...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGTCAGGGGTGTCTCGTTaGTCGCTGGGTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: ASSLASLREDPSQPIHPWSGVSR*SLGPFP
Trigger: GGGAAAAGGACCCAGCGACCAACGAGACACCCCTGA...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCACTTGCGCAGGCGCACTaGCGGCGTAGGACTAGACGA +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPLAQAH*RRRTRR
Trigger: TCGTCTAGTCCTACGCCGCCAGTGCGCCTGCGCAAG...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGCGGGCCGTTCGGTTCTaGATGCTGTCTGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTRAVRF*MLSVFM
Trigger: CATGAAGACAGACAGCATCCAGAACCGAACGGCCCG...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACAGGCACTGCGAGTCCTaGCAGGCTGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHRHCES*QAVRLS
Trigger: GGAGAGCCTGACAGCCTGCCAGGACTCGCAGTGCCT...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCAGGCACTGCGAGTCCTaGCAGGCTGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFRHCES*QAVRLS
Trigger: GGAGAGCCTGACAGCCTGCCAGGACTCGCAGTGCCT...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTACTGCCCGCTTGGGGTaGGAAGCCAGGCTGACGAGT +
Preference number: 4 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPTARLG*EARLTS
Trigger: ACTCGTCAGCCTGGCTTCCCACCCCAAGCGGGCAGT...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp GAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACGGGCTGCTGGGAGGTTaGGCTAGCTCCATTAGGATC +
Preference number: 4 (lower is better)
Translates to: EDPSQPIHPWVPFPGDVNGLLGG*ASSIRI
Trigger: GATCCTAATGGAGCTAGCCCAACCTCCCAGCAGCCC...GTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCGGGCTGCTGGGAGGTTaGGCTAGCTCCATTAGGATC +
Preference number: 4 (lower is better)
Translates to: PPLPVSGRILHSQFILGSGLLGG*ASSIRI
Trigger: GATCCTAATGGAGCTAGCCCAACCTCCCAGCAGCCC...GGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTCTTGGGTCAGGGGCCTaGGAAAAGCGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCLGSGA*EKRDSS
Trigger: GCTGCTGTCGCGCTTTTCCCAGGCCCCTGACCCAAG...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CTTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATCACAAGTGCCCCACTTaGGTCAGGGGCCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LLLSLLPCQSQGGSFTANHKCPT*VRGLGK
Trigger: TTTTCCCAGGCCCCTGACCCAAGTGGGGCACTTGTG...ATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGCTGGGCTCACAGTaGGAGACACCAGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GGSFTANSSLGPLPRGRQQLGSQ*ETPGLG
Trigger: TCCAAGACCTGGTGTCTCCCACTGTGAGCCCAGCTG...TTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGGTGAGTCTAGGTCCATaGGGACTGCCTGTGGGACAG +
Preference number: 4 (lower is better)
Translates to: GSFTANSSLGPLPRGRQQVSLGP*GLPVGQ
Trigger: CTGTCCCACAGGCAGTCCCCATGGACCTAGACTCAC...CTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGTGAGTCTAGGTCCATaGGGACTGCCTGTGGGACAG +
Preference number: 4 (lower is better)
Translates to: PVSGRILHSQFILGSPSQVSLGP*GLPVGQ
Trigger: CTGTCCCACAGGCAGTCCCCATGGACCTAGACTCAC...CTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGCACCAGGTCCATCTaGGCTTCTGCAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PVSGRILHSQFILGSPSQGTRSI*ASAKLP
Trigger: AGGCAGCTTTGCAGAAGCCCAGATGGACCTGGTGCC...CTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTGCTGTTCTGCTTCTCTaGGCCCTACACCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRAVLLL*ALHPEP
Trigger: AGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGC...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp TCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTGCTTTCCGTTTCCGGAGCTaGACCCCGGTGTCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: SWSPVPCSHRSSMMTPSAFRFRS*TPVSRV
Trigger: CACTCGGGACACCGGGGTCCAGCTCCGGAAACGGAA...AGCAGAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTCGTGAGCTCAGGAGCTaGCATCTAGGAAACGGGGAG +
Preference number: 4 (lower is better)
Translates to: PLPVSGRILHSQFILGSPRELRS*HLGNGE
Trigger: CTCCCCGTTTCCTAGATGCCAGCTCCTGAGCTCACG...AGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTACCTCGGGAAGCGCTaGAAACTCTTCCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRYLGKR*KLFQGP
Trigger: AGGGCCCTGGAAGAGTTTCCAGCGCTTCCCGAGGTA...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTGCTAATCGCAGCGCATCCTaGGACGTGCGGGCGGTGCAT +
Preference number: 4 (lower is better)
Translates to: SWSPVPCSHRSSMMTPSANRSAS*DVRAVH
Trigger: ATGCACCGCCCGCACGTCCCAGGATGCGCTGCGATT...AGCAGAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp GGTTACGGAGGGCACGCACCACGCTCTGTAGGCACTGCGAGTCCTGGCAGGCTGTCACAAATAACTCTTTaGCCTCCGCTAGTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GYGGHAPRSVGTASPGRLSQITL*PPLVQL
Trigger: AAGCTGGACTAGCGGAGGCCAAAGAGTTATTTGTGA...CAGCCTGCCAGGACTCGCAGTGCCTACAGAGCGTGGTGCGTGCCCTCCGTAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR TCA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTAAGGGCGACTCAGCCTaGACCGTCAGGTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLKGDSA*TVRFCS
Trigger: ACTGCAGAACCTGACGGTTCAGGCTGAGTCGCCCTT...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp CCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTAAGGGCGACTCAGCCTaGACCGTCAGGTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PGSLDRHLGVRFHVLTAPKGDSA*TVRFCS
Trigger: ACTGCAGAACCTGACGGTTCAGGCTGAGTCGCCCTT...AGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTTTCTGCAAAGCTGCCTaGCAGCAGGGCCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSFCKAA*QQGPEE
Trigger: TTCTTCCGGGCCCTGCTGTCAGGCAGCTTTGCAGAA...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp CTTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATCGACAACCATGCAAATaGTGCAGGACAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLLSLLPCQSQGGSFTANRQPCK*CRTGQA
Trigger: AGCCTGGCCTGTCCTGCATCATTTGCATGGTTGTCG...ATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCCGACAACCATGCAAATaGTGCAGGACAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLASLREDPSQPIHPWVPRQPCK*CRTGQA
Trigger: AGCCTGGCCTGTCCTGCATCATTTGCATGGTTGTCG...GGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp CCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCGACAACCATGCAAATaGTGCAGGACAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PPLPVSGRILHSQFILGSRQPCK*CRTGQA
Trigger: AGCCTGGCCTGTCCTGCATCATTTGCATGGTTGTCG...GGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTTGCCGCTTCCTAGAGTaGCGGGCTTGTGGAATTTTC +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRCRFLE*RACGIF
Trigger: GAAAATTCCACAAGCCCGTCACTCTAGGAAGCGGCA...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp AAGAACTCCAGACTGCCCGGGTCTAGAGAGCAAGGGAGTTGCAAACCTAATCTTCACTGCTCCCTGCTGTaGCAAGGCCAGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KNSRLPGSREQGSCKPNLHCSLL*QGQAVL
Trigger: CAGCACCGCCTGGCCTTGGCACAGCAGGGAGCAGTG...AAGATTAGGTTTGCAACTCCCTTGCTCTCTAGACCCGGGCAGTCTGGAGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR GCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCAAATACGAGGGTGCCATaGGCTTGCACGAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPNTRVP*ACTRVP
Trigger: CGGGACCCTCGTGCAAGCGCATGGCACCCTCGTATT...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACGCCACAATACGAGGGTaGCATGCGCTTGCACGAGGG +
Preference number: 4 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHATIRG*HALARG
Trigger: CCCTCGTGCAAGCGCATGGCACCCTCGTATTGTGGC...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCAGAGTCCAGCAGGAAGTaGAGGTCGGGAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPESSRK*RSGAGT
Trigger: TGTCCCAGCTCCCGACCTGCACTTCCTGCTGGACTC...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTGCCTCTTCACCTGCTaGCTCCACAAGCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPCLFTC*LHKPHQ
Trigger: CTGGTGGGGCTTGTGGAGGCAGCAGGTGAAGAGGCA...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCTAGGCAGGGACCCTTaGCCCCAACTCAATCCCCAT +
Preference number: 4 (lower is better)
Translates to: FCSASSLASLREDPSQPILGRDP*PQLNPH
Trigger: ATGGGGATTGAGTTGGGGGCAAGGGTCCCTGCCTAG...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCGAAAAGCCGTACTCCTaGCCCGAGTGTGACCATCGC +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSEKPYS*PECDHR
Trigger: GCGATGGTCACACTCGGGGCAGGAGTACGGCTTTTC...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR GCA 90 bp CCAGCACAGTGGATGTCCCCACAGCTCTCAGGTTCCATGGCTAAGTTCCCCAGGCAAAGAACTCCAGACTaGCCGGGTCTAGAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: PAQWMSPQLSGSMAKFPRQRTPD*PGLESK
Trigger: CTTGCTCTCTAGACCCGGGCAGTCTGGAGTTCTTTG...CCTGGGGAACTTAGCCATGGAACCTGAGAGCTGTGGGGACATCCACTGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR GCA 90 bp GGTTACGGAGGGCACGCACCACGCTCTGTAGGCACTGCGAGTCCTGGCAGGCTGTGCTGTCTGTCTTCATaGACTGAAGAATGGTCACAA +
Preference number: 4 (lower is better)
Translates to: GYGGHAPRSVGTASPGRLCCLSS*TEEWSQ
Trigger: TTGTGACCATTCTTCAGTGCATGAAGACAGACAGCA...CAGCCTGCCAGGACTCGCAGTGCCTACAGAGCGTGGTGCGTGCCCTCCGTAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR CCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATTGTCTCGTTGGTCGCTaGGTCCTTTTCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHCLVGR*VLFPTQ
Trigger: CTGGGTGGGGAAAAGGACCCAGCGACCAACGAGACA...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCTCAGGGGTGTCTCGTTaGTCGCTGGGTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSSGVSR*SLGPFP
Trigger: GGGAAAAGGACCCAGCGACCAACGAGACACCCCTGA...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp GTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGCTTGCGCAGGCGCACTaGCGGCGTAGGACTAGACGA +
Preference number: 4 (lower is better)
Translates to: VFRSSSWSPVPCSHRSSMLAQAH*RRRTRR
Trigger: TCGTCTAGTCCTACGCCGCCAGTGCGCCTGCGCAAG...CATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp ACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGCGGGCCGTTCGGTTCTaGATGCTGTCTGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: TQNLALASRSRVFRSSSWRAVRF*MLSVFM
Trigger: CATGAAGACAGACAGCATCCAGAACCGAACGGCCCG...CCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGACGGGCCGTTCGGTTCTaGATGCTGTCTGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGRAVRF*MLSVFM
Trigger: CATGAAGACAGACAGCATCCAGAACCGAACGGCCCG...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACACAGCACCAGCACAGTaGATGTCCCCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: EDPSQPIHPWVPFPGDVNTAPAQ*MSPQLS
Trigger: TGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTGT...GTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCACAGCACCAGCACAGTaGATGTCCCCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRTAPAQ*MSPQLS
Trigger: TGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTGT...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCACAGCACCAGCACAGTaGATGTCCCCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PPLPVSGRILHSQFILGSTAPAQ*MSPQLS
Trigger: TGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTGT...GGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCAAGGCCAGGCGGTGCTaGGGTGAGTCTGCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFKARRC*GESARL
Trigger: TAACCTGGCAGACTCACCCCAGCACCGCCTGGCCTT...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTTGGCGAGGATCAGAATaGTTCCCTCGCGTACTGCCC +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSWRGSE*FPRVLP
Trigger: GGGCAGTACGCGAGGGAACCATTCTGATCCTCGCCA...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp GCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTGGGCTGCTGGGAGGTTaGGCTAGCTCCATTAGGATC +
Preference number: 4 (lower is better)
Translates to: APGSLDRHLGVRFHVLTAGLLGG*ASSIRI
Trigger: GATCCTAATGGAGCTAGCCCAACCTCCCAGCAGCCC...AGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp GGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGTGTCATCAGGGCCTGTaGCATAGCCCTCGGAGATCA +
Preference number: 4 (lower is better)
Translates to: GSFTANSSLGPLPRGRQQCHQGL*HSPRRS
Trigger: TGATCTCCGAGGGCTATGCCACAGGCCCTGATGACA...CTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp ACCAGAAGACAAGAGTGCGAGCCTTCTGTTATGCCCGGACAGGGCCAGCAGAAGTGTCATCAGGGCCTGTaGCATAGCCCTCGGAGATCA +
Preference number: 4 (lower is better)
Translates to: TRRQECEPSVMPGQGQQKCHQGL*HSPRRS
Trigger: TGATCTCCGAGGGCTATGCCACAGGCCCTGATGACA...CTTCTGCTGGCCCTGTCCGGGCATAACAGAAGGCTCGCACTCTTGTCTTCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp CCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCACAAGTGCCCCACTTaGGTCAGGGGCCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PGSLDRHLGVRFHVLTAPHKCPT*VRGLGK
Trigger: TTTTCCCAGGCCCCTGACCCAAGTGGGGCACTTGTG...AGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTCAGCTGGGCTCACAGTaGGAGACACCAGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: YTQNLALASRSRVFRSSSQLGSQ*ETPGLG
Trigger: TCCAAGACCTGGTGTCTCCCACTGTGAGCCCAGCTG...AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCAGCTGGGCTCACAGTaGGAGACACCAGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PGSLDRHLGVRFHVLTAPQLGSQ*ETPGLG
Trigger: TCCAAGACCTGGTGTCTCCCACTGTGAGCCCAGCTG...AGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTGCCTGTGGGACAGCTaGGCTCACAGTGGGAGACAC +
Preference number: 4 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPCLWDS*AHSGRH
Trigger: GTGTCTCCCACTGTGAGCCCAGCTGTCCCACAGGCA...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCCATGGGGACTGCCTGTaGGACAGCTGGGCTCACAGT +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFHGDCL*DSWAHS
Trigger: ACTGTGAGCCCAGCTGTCCCACAGGCAGTCCCCATG...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTCATGGGGACTGCCTGTaGGACAGCTGGGCTCACAGT +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCHGDCL*DSWAHS
Trigger: ACTGTGAGCCCAGCTGTCCCACAGGCAGTCCCCATG...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCAGCTGGGACAGGGGCTaGGCCCAGCAGAGGTTCATA +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFSWDRG*AQQRFI
Trigger: TATGAACCTCTGCTGGGCCCAGCCCCTGTCCCAGCT...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCGGCACCAGGTCCATCTaGGCTTCTGCAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSGTRSI*ASAKLP
Trigger: AGGCAGCTTTGCAGAAGCCCAGATGGACCTGGTGCC...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTGCTGTTCTGCTTCTCTaGGCCCTACACCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: PLPVSGRILHSQFILGSPAVLLL*ALHPEP
Trigger: AGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGC...AGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp CTTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATCACCTGCGCTCCACATaGGTGAGAAGGCCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: LLLSLLPCQSQGGSFTANHLRST*VRRPLS
Trigger: ACTTAGAGGCCTTCTCACCCATGTGGAGCGCAGGTG...ATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CCA 90 bp CCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGCAAGAGTCTCAGCCTTaGCTCCACCCTGTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PVSGRILHSQFILGSPSQQESQP*LHPVAA
Trigger: TGCTGCAACAGGGTGGAGCCAAGGCTGAGACTCTTG...CTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CCA 90 bp TGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCCTGGTTAAGCACCACTaGGTACACACCGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: CSASLGPTPRTWPWLLAPLVKHH*VHTGEK
Trigger: CTTTTCACCGGTGTGTACCCAGTGGTGCTTAACCAG...GGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCGTTGTCCGGGTTATaGCAGAAGCTTCCGATGTGG +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTSLSGL*QKLPMW
Trigger: CCACATCGGAAGCTTCTGCCATAACCCGGACAACGA...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CCA 90 bp CCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCTGCATGAGGGAGATGTaGTCCGCGTCGAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PPLPVSGRILHSQFILGSCMREM*SASSFS
Trigger: TGAGAAGCTCGACGCGGACCACATCTCCCTCATGCA...GGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATGCATGAGGGAGATGTaGTCCGCGTCGAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLSLLPCQSQGGSFTANSCMREM*SASSFS
Trigger: TGAGAAGCTCGACGCGGACCACATCTCCCTCATGCA...TGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp AGGGCTTCCTACAGGGAAGAGAGGGCCTTTCAAAAGGTGGGCAACGGGCCTGGGGACAAGGACAGAAGGTaGGACAGTCAGGGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: RASYREERAFQKVGNGPGDKDRR*DSQGVS
Trigger: ACTTACACCCTGACTGTCCCACCTTCTGTCCTTGTC...CCCAGGCCCGTTGCCCACCTTTTGAAAGGCCCTCTCTTCCCTGTAGGAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp TCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTGCTCTGAAGAGACAGTGCTaGGCTCGGGACGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: SWSPVPCSHRSSMMTPSALKRQC*ARDAGN
Trigger: GTTCCCAGCGTCCCGAGCCCAGCACTGTCTCTTCAG...AGCAGAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTTGTCAGGCTGGGAACTaGGGTCTAAGACAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLCQAGN*GLRQVG
Trigger: CCCCACCTGTCTTAGACCCCAGTTCCCAGCCTGACA...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp AGGGCTTCCTACAGGGAAGAGAGGGCCTTTCAAAAGGTGGGCAACGGGCCTGGGGAAAGCTTGTCAGGCTaGGAACTGGGGTCTAAGACA +
Preference number: 4 (lower is better)
Translates to: RASYREERAFQKVGNGPGESLSG*ELGSKT
Trigger: TGTCTTAGACCCCAGTTCCCAGCCTGACAAGCTTTC...CCCAGGCCCGTTGCCCACCTTTTGAAAGGCCCTCTCTTCCCTGTAGGAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CCA 90 bp TACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTGGGCCTTTCAAAAGGTaGGCAACGGGCCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: YTQNLALASRSRVFRSSSGPFKR*ATGLGN
Trigger: GTTTCCCAGGCCCGTTGCCCACCTTTTGAAAGGCCC...AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
3UTR CAA 72 bp TTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTaGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCT +
Preference number: 4 (lower is better)
Translates to: FCFSGPYTQNLA*ASRSRVFRSSS
Trigger: AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
3UTR CAA 72 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTaGGGTCCCCTTCCCAGGGGACGTCAACAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: QSQGGSFTANSS*GPLPRGRQQSR
Trigger: CCTAGACTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACTTCTGCAAAGCTGCCTaGCAGCAGGGCCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHFCKAA*QQGPEE
Trigger: TTCTTCCGGGCCCTGCTGTCAGGCAGCTTTGCAGAA...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp CCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCAAAGTCCGGAAACCTaGTGCTTGGTGGTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: PPLPVSGRILHSQFILGSQSPET*CLVVSV
Trigger: CACACTCACCACCAAGCATCAGGTTTCCGGACTTTG...GGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR TCA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGGACATAGTGAGGTGTaGCCAGAAGACAAGAGTGCG +
Preference number: 4 (lower is better)
Translates to: ASSLASLREDPSQPIHPWGHSEV*PEDKSA
Trigger: CGCACTCTTGTCTTCTGGTCACACCTCACTATGTCC...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp CCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGTCACCAAAGGGAGTATaGCTCCGAGTCTGCGCACTT +
Preference number: 4 (lower is better)
Translates to: PVSGRILHSQFILGSPSQSPKGV*LRVCAL
Trigger: AAGTGCGCAGACTCGGAGGCATACTCCCTTTGGTGA...CTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCACCAAAGGGAGTATaGCTCCGAGTCTGCGCACTT +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRSPKGV*LRVCAL
Trigger: AAGTGCGCAGACTCGGAGGCATACTCCCTTTGGTGA...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCCGTTCGGTTCTGGATaGTGTCTGTCTTCATGCACT +
Preference number: 4 (lower is better)
Translates to: SGLFCFSGPYTQNLALASPFGSG*CLSSCT
Trigger: AGTGCATGAAGACAGACAGCATCCAGAACCGAACGG...AGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp CAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCCGTTCGGTTCTGGATaGTGTCTGTCTTCATGCACT +
Preference number: 4 (lower is better)
Translates to: QGGSFTANSSLGPLPRGRPFGSG*CLSSCT
Trigger: AGTGCATGAAGACAGACAGCATCCAGAACCGAACGG...ACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTGCCACAATACGAGGGTaGCATGCGCTTGCACGAGGG +
Preference number: 4 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTATIRG*HALARG
Trigger: CCCTCGTGCAAGCGCATGGCACCCTCGTATTGTGGC...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TCCAAATTGTTTAATCTCAATTCCAGAGGTCTAGGCCAGGCCAGGCACCTGGGGTGCCTCTTCACCTGCTaGCTCCACAAGCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: SKLFNLNSRGLGQARHLGCLFTC*LHKPHQ
Trigger: CTGGTGGGGCTTGTGGAGGCAGCAGGTGAAGAGGCA...CCCCAGGTGCCTGGCCTGGCCTAGACCTCTGGAATTGAGATTAAACAATTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000457010.6
ENST00000564900.1
CDS-3UTR GCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCCTAGGCAGGGACCCTTaGCCCCAACTCAATCCCCAT +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFLGRDP*PQLNPH
Trigger: ATGGGGATTGAGTTGGGGGCAAGGGTCCCTGCCTAG...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCACAGTTGGAATCTGCTaGGGCACCAGCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: PPLPVSGRILHSQFILGSTVGIC*GTSTVT
Trigger: TGTGACTGTGCTGGTGCCGCAGCAGATTCCAACTGT...GGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CCA 90 bp TCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTGCTTGTCTCGTTGGTCGCTaGGTCCTTTTCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SWSPVPCSHRSSMMTPSACLVGR*VLFPTQ
Trigger: CTGGGTGGGGAAAAGGACCCAGCGACCAACGAGACA...AGCAGAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTGTCTCGTTGGTCGCTaGGTCCTTTTCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPCLVGR*VLFPTQ
Trigger: CTGGGTGGGGAAAAGGACCCAGCGACCAACGAGACA...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCGGGCCGTTCGGTTCTaGATGCTGTCTGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSRAVRF*MLSVFM
Trigger: CATGAAGACAGACAGCATCCAGAACCGAACGGCCCG...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCGGGCCGTTCGGTTCTaGATGCTGTCTGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: QNLALASRSRVFRSSSWSRAVRF*MLSVFM
Trigger: CATGAAGACAGACAGCATCCAGAACCGAACGGCCCG...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTACAGCACCAGCACAGTaGATGTCCCCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: YTQNLALASRSRVFRSSSTAPAQ*MSPQLS
Trigger: TGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTGT...AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAACAGATTGAGAAACAGGAGCGATGCGCCATCACAAAGCACGTTATTCCGGGAAGGCACTGCGAGTCCTaGCAGGCTGTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QQIEKQERCAITKHVIPGRHCES*QAVRLS
Trigger: GGAGAGCCTGACAGCCTGCCAGGACTCGCAGTGCCT...TCCCGGAATAACGTGCTTTGTGATGGCGCATCGCTCCTGTTTCTCAATCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR CCA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTGGCGAGGATCAGAATaGTTCCCTCGCGTACTGCCC +
Preference number: 4 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPWRGSE*FPRVLP
Trigger: GGGCAGTACGCGAGGGAACCATTCTGATCCTCGCCA...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTCAGCTGGGCTCACAGTaGGAGACACCAGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPQLGSQ*ETPGLG
Trigger: TCCAAGACCTGGTGTCTCCCACTGTGAGCCCAGCTG...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTGTGAGTCTAGGTCCATaGGGACTGCCTGTGGGACAG +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCVSLGP*GLPVGQ
Trigger: CTGTCCCACAGGCAGTCCCCATGGACCTAGACTCAC...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTGCTGTTCTGCTTCTCTaGGCCCTACACCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: APGSLDRHLGVRFHVLTAAVLLL*ALHPEP
Trigger: AGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGC...AGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTACCTCGGGAAGCGCTaGAAACTCTTCCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPYLGKR*KLFQGP
Trigger: AGGGCCCTGGAAGAGTTTCCAGCGCTTCCCGAGGTA...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTAGCCATGGGGGAGGATaGGGACTCACATGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTSHGGG*GLTWGQ
Trigger: TTGCCCCCATGTGAGTCCCCATCCTCCCCCATGGCT...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp AATGGCTACAATTATCTGGTCTGGGAGGGCTCTCTCTCATCTATAGAGAGTGCACAGGCGGTGCTGGGGTaGGTCTGCCAGGTTACGGAG +
Preference number: 4 (lower is better)
Translates to: NGYNYLVWEGSLSSIESAQAVLG*VCQVTE
Trigger: CTCCGTAACCTGGCAGACTCACCCCAGCACCGCCTG...TGCACTCTCTATAGATGAGAGAGAGCCCTCCCAGACCAGATAATTGTAGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR TCA 90 bp GTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGAAGGGCGACTCAGCCTaGACCGTCAGGTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: VFRSSSWSPVPCSHRSSMKGDSA*TVRFCS
Trigger: ACTGCAGAACCTGACGGTTCAGGCTGAGTCGCCCTT...CATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTCGACAACCATGCAAATaGTGCAGGACAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCRQPCK*CRTGQA
Trigger: AGCCTGGCCTGTCCTGCATCATTTGCATGGTTGTCG...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCCGACAACCATGCAAATaGTGCAGGACAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VILESGSMFSPLLHDDSFRQPCK*CRTGQA
Trigger: AGCCTGGCCTGTCCTGCATCATTTGCATGGTTGTCG...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR TCA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTTGCCGCTTCCTAGAGTaGCGGGCTTGTGGAATTTTC +
Preference number: 4 (lower is better)
Translates to: FCSASSLASLREDPSQPICRFLE*RACGIF
Trigger: GAAAATTCCACAAGCCCGTCACTCTAGGAAGCGGCA...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR TCA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTTTAGCGCCACCGCAGTaGTGCAAGTCGGAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLLAPPQ*CKSEVV
Trigger: TACAACTTCCGACTTGCATCACTGCGGTGGCGCTAA...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp TACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTGGTGAAACCTCTGGGTaGGAAATCAGGGCACTGAAG +
Preference number: 4 (lower is better)
Translates to: YTQNLALASRSRVFRSSSGETSG*EIRALK
Trigger: CTTCAGTGCCCTGATTTCTCACCCAGAGGTTTCACC...AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR GCA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTTCACCAAAGGGAGTATaGCTCCGAGTCTGCGCACTT +
Preference number: 4 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLSPKGV*LRVCAL
Trigger: AAGTGCGCAGACTCGGAGGCATACTCCCTTTGGTGA...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCCGTTCGGTTCTGGATaGTGTCTGTCTTCATGCACT +
Preference number: 4 (lower is better)
Translates to: AQPPPLPVSGRILHSQFIPFGSG*CLSSCT
Trigger: AGTGCATGAAGACAGACAGCATCCAGAACCGAACGG...GATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGACCGTTCGGTTCTGGATaGTGTCTGTCTTCATGCACT +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGPFGSG*CLSSCT
Trigger: AGTGCATGAAGACAGACAGCATCCAGAACCGAACGG...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTCATGATGACTCCTTCTaGTCAGCCTCCTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCHDDSF*SASSLA
Trigger: GGCAAGGGAGGAGGCTGAGCAGAAGGAGTCATCATG...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGTCAGGGGTGTCTCGTTaGTCGCTGGGTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: VFRSSSWSPVPCSHRSSMSGVSR*SLGPFP
Trigger: GGGAAAAGGACCCAGCGACCAACGAGACACCCCTGA...CATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACTGTCATCAGGGCCTGTaGCATAGCCCTCGGAGATCA +
Preference number: 4 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHCHQGL*HSPRRS
Trigger: TGATCTCCGAGGGCTATGCCACAGGCCCTGATGACA...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCCAAATTGTTTAATCTCAATTCCAGAGGTCTAGGCCAGGCCAGGCACCTGGGGCACAAGTGCCCCACTTaGGTCAGGGGCCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SKLFNLNSRGLGQARHLGHKCPT*VRGLGK
Trigger: TTTTCCCAGGCCCCTGACCCAAGTGGGGCACTTGTG...CCCCAGGTGCCTGGCCTGGCCTAGACCTCTGGAATTGAGATTAAACAATTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTGGCACCAGGTCCATCTaGGCTTCTGCAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTGTRSI*ASAKLP
Trigger: AGGCAGCTTTGCAGAAGCCCAGATGGACCTGGTGCC...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTGCTGTTCTGCTTCTCTaGGCCCTACACCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCAVLLL*ALHPEP
Trigger: AGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGC...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCAGTTTTGTGCACAGTTaGAATCTGCTGCGGCACCAG +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRSFVHS*NLLRHQ
Trigger: CTGGTGCCGCAGCAGATTCCAACTGTGCACAAAACT...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CCA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGATGTGGCTCTGATCTaGTTAAGCACCACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: ASSLASLREDPSQPIHPWDVALI*LSTTGY
Trigger: GTACCCAGTGGTGCTTAACCAGATCAGAGCCACATC...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CCA 90 bp TCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTGCTCGTGAGCTCAGGAGCTaGCATCGTTGTCCGGGTTAT +
Preference number: 4 (lower is better)
Translates to: SWSPVPCSHRSSMMTPSARELRS*HRCPGY
Trigger: ATAACCCGGACAACGATGCCAGCTCCTGAGCTCACG...AGCAGAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAAGAGTGACGGGCTTGTaGAATTTTCCGTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGRVTGL*NFPFPE
Trigger: CTCCGGAAACGGAAAATTCCACAAGCCCGTCACTCT...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CCA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGAGAGTGACGGGCTTGTaGAATTTTCCGTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRRVTGL*NFPFPE
Trigger: CTCCGGAAACGGAAAATTCCACAAGCCCGTCACTCT...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTGCTTCACCAAAGGGAGTATaGCTCCGAGTCTGCGCACTT +
Preference number: 4 (lower is better)
Translates to: SWSPVPCSHRSSMMTPSASPKGV*LRVCAL
Trigger: AAGTGCGCAGACTCGGAGGCATACTCCCTTTGGTGA...AGCAGAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTGCTGTCTGTCTTCATaGACTGAAGAATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTCCLSS*TEEWSP
Trigger: TGGTGACCATTCTTCAGTGCATGAAGACAGACAGCA...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTCCGTTCGGTTCTGGATaGTGTCTGTCTTCATGCACT +
Preference number: 4 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLPFGSG*CLSSCT
Trigger: AGTGCATGAAGACAGACAGCATCCAGAACCGAACGG...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCCAAATTGTTTAATCTCAATTCCAGAGGTCTAGGCCAGGCCAGGCACCTGGGGACAGCACCAGCACAGTaGATGTCCCCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SKLFNLNSRGLGQARHLGTAPAQ*MSPQLS
Trigger: TGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTGT...CCCCAGGTGCCTGGCCTGGCCTAGACCTCTGGAATTGAGATTAAACAATTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CCA 90 bp GTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGTGTCATCAGGGCCTGTaGCATAGCCCTCGGAGATCA +
Preference number: 4 (lower is better)
Translates to: VFRSSSWSPVPCSHRSSMCHQGL*HSPRRS
Trigger: TGATCTCCGAGGGCTATGCCACAGGCCCTGATGACA...CATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCTTTAGATCGTCATCTTaGAGTCCGGTTCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: AVLLLWALHPEPGLGFSLFRSSS*SPVPCS
Trigger: AGAACATGGAACCGGACTCCAAGATGACGATCTAAA...GAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
3UTR CAA 72 bp TATAGAGAGTGCAGTGACGTCACGGGGCACAACAGATaGAGAAACAGGAGCGATGCGCCATCACAAAGCACG +
Preference number: 4 (lower is better)
Translates to: YRECSDVTGHNR*RNRSDAPSQST
Trigger: CGTGCTTTGTGATGGCGCATCGCTCCTGTTTCTCAATCTGTTGTGCCCCGTGACGTCACTGCACTCTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR GCA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTTCACCAAAGGGAGTATaGCTCCGAGTCTGCGCACTT +
Preference number: 4 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTSPKGV*LRVCAL
Trigger: AAGTGCGCAGACTCGGAGGCATACTCCCTTTGGTGA...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTGCTGTCTGTCTTCATaGACTGAAGAATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: SLASLREDPSQPIHPWVPCCLSS*TEEWSP
Trigger: TGGTGACCATTCTTCAGTGCATGAAGACAGACAGCA...GGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGTGCTGTCTGTCTTCATaGACTGAAGAATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: GSFTANSSLGPLPRGRQQCCLSS*TEEWSP
Trigger: TGGTGACCATTCTTCAGTGCATGAAGACAGACAGCA...CTGTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGGAGAAGGCCTCTAAGTaGCTTGTTTGTAGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: SGRILHSQFILGSPSQGTEKASK*LVCSKS
Trigger: ACTCTTACTACAAACAAGGCACTTAGAGGCCTTCTC...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CCA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGATCATGCACTGAAGAATaGTCACCAAAGGGAGTATGC +
Preference number: 4 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGSCTEE*SPKGVC
Trigger: GCATACTCCCTTTGGTGACCATTCTTCAGTGCATGA...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCATGCACTGAAGAATaGTCACCAAAGGGAGTATGC +
Preference number: 4 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRSCTEE*SPKGVC
Trigger: GCATACTCCCTTTGGTGACCATTCTTCAGTGCATGA...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACTCATGCACTGAAGAATaGTCACCAAAGGGAGTATGC +
Preference number: 4 (lower is better)
Translates to: EDPSQPIHPWVPFPGDVNSCTEE*SPKGVC
Trigger: GCATACTCCCTTTGGTGACCATTCTTCAGTGCATGA...GTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CTCTCTCTCATCTATAGAGAGTGCAGTGACGTCACGGGGCACAACAGATTGAGACGGGCCGTTCGGTTCTaGATGCTGTCTGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: LSLIYRECSDVTGHNRLRRAVRF*MLSVFM
Trigger: CATGAAGACAGACAGCATCCAGAACCGAACGGCCCG...TCTCAATCTGTTGTGCCCCGTGACGTCACTGCACTCTCTATAGATGAGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR CCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCAAGAGTGACGGGCTTGTaGAATTTTCCGTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPRVTGL*NFPFPE
Trigger: CTCCGGAAACGGAAAATTCCACAAGCCCGTCACTCT...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR GCA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCTGCTGTCTGTCTTCATaGACTGAAGAATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: LPVSGRILHSQFILGSPSCCLSS*TEEWSP
Trigger: TGGTGACCATTCTTCAGTGCATGAAGACAGACAGCA...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCTTTAGATCGTCATCTTaGAGTCCGGTTCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: WPWLLAPGSLDRHLGVRFFRSSS*SPVPCS
Trigger: AGAACATGGAACCGGACTCCAAGATGACGATCTAAA...GAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp ACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGTTTAGATCGTCATCTTaGAGTCCGGTTCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: TQNLALASRSRVFRSSSWFRSSS*SPVPCS
Trigger: AGAACATGGAACCGGACTCCAAGATGACGATCTAAA...CCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR GCA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGCTGTCTGTCTTCATaGACTGAAGAATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPCCLSS*TEEWSP
Trigger: TGGTGACCATTCTTCAGTGCATGAAGACAGACAGCA...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACTCATGCACTGAAGAATaGTCACCAAAGGGAGTATGC +
Preference number: 4 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHSCTEE*SPKGVC
Trigger: GCATACTCCCTTTGGTGACCATTCTTCAGTGCATGA...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp GGTTCTGGATGCTGTCTGTCTTCATGCACTGAAGAATGGTCACAAATAACTCTTAAGGCCAGGCGGTGCTaGGGTGAGTCTGCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: GSGCCLSSCTEEWSQITLKARRC*GESARL
Trigger: TAACCTGGCAGACTCACCCCAGCACCGCCTGGCCTT...AAGAGTTATTTGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR CCA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATTTTAGATCGTCATCTTaGAGTCCGGTTCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHFRSSS*SPVPCS
Trigger: AGAACATGGAACCGGACTCCAAGATGACGATCTAAA...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTTCATGCACTGAAGAATaGTCACCAAAGGGAGTATGC +
Preference number: 4 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTSCTEE*SPKGVC
Trigger: GCATACTCCCTTTGGTGACCATTCTTCAGTGCATGA...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp TGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCTCTATAATCATAACCTaGGAAAAACCAGGCCATACA +
Preference number: 4 (lower is better)
Translates to: WPWLLAPGSLDRHLGVRFSIIIT*EKPGHT
Trigger: TGTATGGCCTGGTTTTTCCCAGGTTATGATTATAGA...GAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR TCA 90 bp ACGGGCCGTTCGGTTCTGGATGCTGTCTGTCTTCATGCACTGAAGAATGGTCACTCTGTCTTCATGCACTaGAGAATGGTCACAAATAAC +
Preference number: 4 (lower is better)
Translates to: TGRSVLDAVCLHALKNGHSVFMH*RMVTNN
Trigger: GTTATTTGTGACCATTCTTCAGTGCATGAAGACAGA...GTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR GCA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTGTAGTAAGAGTTTTGTaGACAGTTGGAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTVVRVL*TVGICC
Trigger: GCAGCAGATTCCAACTGTGCACAAAACTCTTACTAC...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR GCA 90 bp ACAAATAACTCTTTGGCCTCCGCTAGTCCAGCTTCGAAAGAAGTCCTCAACAACGAGAAACAGGAGCGATaGGCCATCACAAAGCACGTT +
Preference number: 4 (lower is better)
Translates to: TNNSLASASPASKEVLNNEKQER*AITKHV
Trigger: AACGTGCTTTGTGATGGCGCATCGCTCCTGTTTCTC...GTTGTTGAGGACTTCTTTCGAAGCTGGACTAGCGGAGGCCAAAGAGTTATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR CCA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTTTTAGATCGTCATCTTaGAGTCCGGTTCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTFRSSS*SPVPCS
Trigger: AGAACATGGAACCGGACTCCAAGATGACGATCTAAA...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CCA 90 bp CAACAGATTGAGAAACAGGAGCGATGCGCCATCACAAAGCACGTTATTCCGGGATACAATTATCTGGTCTaGGAGGGCTCTCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: QQIEKQERCAITKHVIPGYNYLV*EGSLSS
Trigger: AGATGAGAGAGAGCCCTCCCAGACCAGATAATTGTA...TCCCGGAATAACGTGCTTTGTGATGGCGCATCGCTCCTGTTTCTCAATCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR GCA 90 bp CTCATCTATAGAGAGTGCAGTGACGTCACGGGGCACAACAGATTGAGAAACAGGAGAGAGCAAGGGAGTTaGAAACCTAATCTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: LIYRECSDVTGHNRLRNRREQGS*KPNLSR
Trigger: CCTAGAAAGATTAGGTTTGCAACTCCCTTGCTCTCT...CCTGTTTCTCAATCTGTTGTGCCCCGTGACGTCACTGCACTCTCTATAGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR CCA 90 bp AATGGCTACAATTATCTGGTCTGGGAGGGCTCTCTCTCATCTATAGAGAGTGCAATGGCTACAATTATCTaGTCTGGGAGGGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NGYNYLVWEGSLSSIESAMATII*SGRALS
Trigger: AGAGAGAGCCCTCCCAGACCAGATAATTGTAGCCAT...TGCACTCTCTATAGATGAGAGAGAGCCCTCCCAGACCAGATAATTGTAGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR GCA 90 bp GAAGTCCTCAACAACCAATTCCTAGATAATGGCTACAATTATCTGGTCTGGGAGCCGTTCGGTTCTGGATaGTGTCTGTCTTCATGCACT +
Preference number: 4 (lower is better)
Translates to: EVLNNQFLDNGYNYLVWEPFGSG*CLSSCT
Trigger: AGTGCATGAAGACAGACAGCATCCAGAACCGAACGG...CTCCCAGACCAGATAATTGTAGCCATTATCTAGGAATTGGTTGTTGAGGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR CCA 90 bp ACTGAAGAATGGTCACAAATAACTCTTTGGCCTCCGCTAGTCCAGCTTCGAAAGTCATGCACTGAAGAATaGTCACAAATAACTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TEEWSQITLWPPLVQLRKSCTEE*SQITLW
Trigger: CCAAAGAGTTATTTGTGACCATTCTTCAGTGCATGA...CTTTCGAAGCTGGACTAGCGGAGGCCAAAGAGTTATTTGTGACCATTCTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS GCA 90 bp CTGGCCCTTCGCGTCCCCAAGGCTCCTCGATGGCGGCGGCGGGGCTaGGGCCCGGAGTGCGTTGGGTGCGTGGTGCCCGCAGCGAGGTCG +
Preference number: 5 (lower is better)
Translates to: LALRVPKAPRWRRRG*GPECVGCVVPAARS
Trigger: CGACCTCGCTGCGGGCACCACGCACCCAACGCACTCCGGGCCGCAGCCCCGCCGCCGCCATCGAGGAGCCTTGGGGACGCGAAGGGCCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS CCA 90 bp ACAGCAGCAGCAGGGCTGGCCCTTCGCGTCCCCAAGGCTCCTCGATaGCGGCGGCGGGGCTGCGGCCCGGAGTGCGTTGGGTGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: TAAAGLALRVPKAPR*RRRGCGPECVGCVV
Trigger: CACCACGCACCCAACGCACTCCGGGCCGCAGCCCCGCCGCCGCCATCGAGGAGCCTTGGGGACGCGAAGGGCCAGCCCTGCTGCTGCTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS GCA 90 bp GGGGCCGGCCGGGTCAGCGCCGCAAGGAGGAGCCGGAGACCACCCTaGTCCAGAAGCAGCCGGCGCCACAGAGAGGGCTTCCGGCAGATG +
Preference number: 5 (lower is better)
Translates to: GAGRVSAARRSRRPP*SRSSRRHREGFRQM
Trigger: CATCTGCCGGAAGCCCTCTCTGTGGCGCCGGCTGCTTCTGGAGCAGGGTGGTCTCCGGCTCCTCCTTGCGGCGCTGACCCGGCCGGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000563544.5
ENST00000564900.1
CDS TCA 90 bp GCTGCGCACGAAGGCCTCGAGGCAGGCAGGGTTGCAGGTGAGGCGTaGCAGAATGCGCAGTGCACGTGGGCTGGGCGGGCCCGGTGCGCC +
Preference number: 5 (lower is better)
Translates to: AAHEGLEAGRVAGEA*QNAQCTWAGRARCA
Trigger: GGCGCACCGGGCCCGCCCAGCCCACGTGCACTGCGCATTCTGTCACGCCTCACCTGCAACCCTGCCTGCCTCGAGGCCTTCGTGCGCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS TCA 90 bp CGGCCGCCGCCGCGAGCTGCGCGAGGCAGAACGAGAGCGAGTCCGTaGGGGTTGGCTTCGCAGCCGCCATCTTGGCTCGGGCCTCAGACT +
Preference number: 5 (lower is better)
Translates to: RPPPRAARGRTRASP*GLASQPPSWLGPQT
Trigger: AGTCTGAGGCCCGAGCCAAGATGGCGGCTGCGAAGCCAACCCTCACGGACTCGCTCTCGTTCTGCCTCGCGCAGCTCGCGGCGGCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CCA 90 bp TCTGCAGTAGCCTCTCCCCCAGCTCTCGGTGCCGGCTGTGGAGAGTaGGCCGGGCACGTGGTGCCGGCCAATCGTCAGGCGCCACCCCCA +
Preference number: 5 (lower is better)
Translates to: SAVASPPALGAGCGE*AGHVVPANRQAPPP
Trigger: TGGGGGTGGCGCCTGACGATTGGCCGGCACCACGTGCCCGGCCCACTCTCCACAGCCGGCACCGAGAGCTGGGGGAGAGGCTACTGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000563544.5
ENST00000564900.1
CDS CCA 90 bp CGCCGCGAGCTGCGCGAGGCAGAACGAGAGCGAGTCCGTGAGGGTTaGCTTCGCAGCCGCCATCTTGGCTCGGGCCTCAGACTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: RRELREAERERVREG*LRSRHLGSGLRLRP
Trigger: GGGGCGGAGTCTGAGGCCCGAGCCAAGATGGCGGCTGCGAAGCCAACCCTCACGGACTCGCTCTCGTTCTGCCTCGCGCAGCTCGCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS TCA 90 bp CGCCATAGCTGCGCACGAAGGCCTCGAGGCAGGCAGGGTTGCAGGTaGGGCGTGACAGAATGCGCAGTGCACGTGGGCTGGGCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: RHSCARRPRGRQGCR*GVTECAVHVGWAGP
Trigger: CGGGCCCGCCCAGCCCACGTGCACTGCGCATTCTGTCACGCCTCACCTGCAACCCTGCCTGCCTCGAGGCCTTCGTGCGCAGCTATGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS GCA 90 bp GGGGGCAAGGAGACGGGTGGGTATGGGAACTCACCCAGCTCTCGGTaGCGGCTGTGGAGAGTGGGCCGGGCACGTGGTGCCGGCCAATCG +
Preference number: 5 (lower is better)
Translates to: GGKETGGYGNSPSSR*RLWRVGRARGAGQS
Trigger: CGATTGGCCGGCACCACGTGCCCGGCCCACTCTCCACAGCCGGCACCGAGAGCTGGGTGAGTTCCCATACCCACCCGTCTCCTTGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS CCA 90 bp GTGGGTATGGGAACTCACCCAGCTCTCGGTGCCGGCTGTGGAGAGTaGGCCGGGCACGTGGTGCCGGCCAATCGTCAGGCGCCACCCCCA +
Preference number: 5 (lower is better)
Translates to: VGMGTHPALGAGCGE*AGHVVPANRQAPPP
Trigger: TGGGGGTGGCGCCTGACGATTGGCCGGCACCACGTGCCCGGCCCACTCTCCACAGCCGGCACCGAGAGCTGGGTGAGTTCCCATACCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS CCA 90 bp GAGACGGGTGGGTATGGGAACTCACCCAGCTCTCGGTGCCGGCTGTaGAGAGTGGGCCGGGCACGTGGTGCCGGCCAATCGTCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: ETGGYGNSPSSRCRL*RVGRARGAGQSSGA
Trigger: GGCGCCTGACGATTGGCCGGCACCACGTGCCCGGCCCACTCTCCACAGCCGGCACCGAGAGCTGGGTGAGTTCCCATACCCACCCGTCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CAA 90 bp CAGGACAGGCCAGGCTGCACCAGGCGACAGACCTCGCAGGGGCACCAGGTCCATGCCAAGTCCAGCGTCTaGCGCAGGCGCACTGGCGGC +
Preference number: 5 (lower is better)
Translates to: QDRPGCTRRQTSQGHQVHAKSSV*RRRTGG
Trigger: GCCGCCAGTGCGCCTGCGCAAGACGCTGGACTTGGC...ATGGACCTGGTGCCCCTGCGAGGTCTGTCGCCTGGTGCAGCCTGGCCTGTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS CCA 90 bp GGAGGGCACGGACGAGGGCTAAGGTCAGTGCAGCATCTGGGGCAGTaGCCAGGAGCTCGGCCAGCGGACGCACTGCTCCCTGCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: GGHGRGLRSVQHLGQ*PGARPADALLPAVP
Trigger: TGGCACAGCAGGGAGCAGTGCGTCCGCTGGCCGAGCTCCTGGCCACTGCCCCAGATGCTGCACTGACCTTAGCCCTCGTCCGTGCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS TCA 90 bp CGCCATCTTGGCTCGGGCCTCAGACTCCGCCCCGCTTCTCGCCGCTaGTCCCAGGGAGCGGAACTGGAAGACAGGGAAATCGTCGGGCAC +
Preference number: 5 (lower is better)
Translates to: RHLGSGLRLRPASRR*SQGAELEDREIVGH
Trigger: GTGCCCGACGATTTCCCTGTCTTCCAGTTCCGCTCCCTGGGATCAGCGGCGAGAAGCGGGGCGGAGTCTGAGGCCCGAGCCAAGATGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS GCA 90 bp GAAGCCAGGCTGACGAGTGGGCCCAATCCCCCACCCAGACTTAGCTaGTCAGCACAGGCCCGGGAGCAGCCTCGGCTGAGTTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: EARLTSGPNPPPRLS*SAQAREQPRLSSRR
Trigger: CCTCCTGGAACTCAGCCGAGGCTGCTCCCGGGCCTGTGCTGAGCAGCTAAGTCTGGGTGGGGGATTGGGCCCACTCGTCAGCCTGGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 90 bp GGCGCTGCCGGAGCTCATCTACCAGCACCTCCACGCCACCAGCATTaGCCAGTGCAGGCCGAATCAGGCCCTGGGCACACAGGTTGGCGA +
Preference number: 5 (lower is better)
Translates to: GAAGAHLPAPPRHQH*PVQAESGPGHTGWR
Trigger: TCGCCAACCTGTGTGCCCAGGGCCTGATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGGAGGTGCTGGTAGATGAGCTCCGGCAGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 90 bp GGTCACATAGGTCAGCAGGCCGTACAGCGCCGGGCCGGTCACAAGTaGCCCACTTGGGTCAGGGGCCTGGGAAAAGCGCGACAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GHIGQQAVQRRAGHK*PTWVRGLGKARQQQ
Trigger: CTGCTGCTGTCGCGCTTTTCCCAGGCCCCTGACCCAAGTGGGGCACTTGTGACCGGCCCGGCGCTGTACGGCCTGCTGACCTATGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp TCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCGCGTACTGCCCGCTaGGGGTGGGAAGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SASLGPTPRTWPWLLAPGSRTAR*GWEARL
Trigger: CAGCCTGGCTTCCCACCCCAAGCGGGCAGTACGCGA...CCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS GCA 90 bp AGGGGCTGCTGGGAGGTTGGGCTAGCTCCATTAGGATCCCGGCGCTaGCGGAGCTCATCTACCAGCACCTCCACGCCACCAGCATTGCCC +
Preference number: 5 (lower is better)
Translates to: RGCWEVGLAPLGSRR*RSSSTSTSTPPALP
Trigger: GGGCAATGCTGGTGGCGTGGAGGTGCTGGTAGATGAGCTCCGGCAGCGCCGGGATCCTAATGGAGCTAGCCCAACCTCCCAGCAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 90 bp TTGATGGCCTCACGACATAGGAGGCACACAGCCCGCACCAGGGGCTaGTGGGAGGTTGGGCTAGCTCCATTAGGATCCCGGCGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: LMASRHRRHTARTRG*WEVGLAPLGSRRCR
Trigger: CCGGCAGCGCCGGGATCCTAATGGAGCTAGCCCAACCTCCCAGCAGCCCCTGGTGCGGGCTGTGTGCCTCCTATGTCGTGAGGCCATCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CCA 90 bp AGATGTGGTCCGCGTCGAGCTTCTCACGCCTACCTCGGGAAGCGCTaGAAACTCTTCCAGGGCCCTCCAGGTGGGCCAGGGCCTCCGAAC +
Preference number: 5 (lower is better)
Translates to: RCGPRRASHAYLGKR*KLFQGPPGGPGPPN
Trigger: GTTCGGAGGCCCTGGCCCACCTGGAGGGCCCTGGAAGAGTTTCCAGCGCTTCCCGAGGTAGGCGTGAGAAGCTCGACGCGGACCACATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS CCA 90 bp ATCGCAGCGCATCCTGGGACGTGCGGGCGGTGCATGAGGGAGATGTaGTCCGCGTCGAGCTTCTCACGCCTACCTCGGGAAGCGCTGGAA +
Preference number: 5 (lower is better)
Translates to: IAAHPGTCGRCMREM*SASSFSRLPREALE
Trigger: TTCCAGCGCTTCCCGAGGTAGGCGTGAGAAGCTCGACGCGGACCACATCTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGCTGCGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS CCA 90 bp GTCCTTGCACACGAGGCGCGGCAGTACCTTAATCGCAGCGCATCCTaGGACGTGCGGGCGGTGCATGAGGGAGATGTGGTCCGCGTCGAG +
Preference number: 5 (lower is better)
Translates to: VLAHEARQYLNRSAS*DVRAVHEGDVVRVE
Trigger: CTCGACGCGGACCACATCTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGCTGCGATTAAGGTACTGCCGCGCCTCGTGTGCAAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CAA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGCGGCCCGGAGTGCGTaGGGTGCGTGGTGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRAARSA*GAWCPQ
Trigger: CTGCGGGCACCACGCACCCAACGCACTCCGGGCCGC...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCGCGGCCCGGAGTGCGTaGGGTGCGTGGTGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRAARSA*GAWCPQ
Trigger: CTGCGGGCACCACGCACCCAACGCACTCCGGGCCGC...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp ACCAGAAGACAAGAGTGCGAGCCTTCTGTTATGCCCGGACAGGGCCAGCAGAAGGCGGCCCGGAGTGCGTaGGGTGCGTGGTGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: TRRQECEPSVMPGQGQQKAARSA*GAWCPQ
Trigger: CTGCGGGCACCACGCACCCAACGCACTCCGGGCCGC...CTTCTGCTGGCCCTGTCCGGGCATAACAGAAGGCTCGCACTCTTGTCTTCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CAA 90 bp CTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCAGCGGCCCGGAGTGCGTaGGGTGCGTGGTGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: LLSLLPCQSQGGSFTANSAARSA*GAWCPQ
Trigger: CTGCGGGCACCACGCACCCAACGCACTCCGGGCCGC...TGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp TGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCCCCGGAAGTCTGTCCTaGCACACGAGGCGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: CFSGPYTQNLALASRSRVPGSLS*HTRRGS
Trigger: ACTGCCGCGCCTCGTGTGCAAGGACAGACTTCCGGG...GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS TCA 90 bp CACCCAGACTTAGCTGCTCAGCACAGGCCCGGGAGCAGCCTCGGCTaGGTTCCAGGAGGGCACGGACGAGGGCTAAGGTCAGTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: HPDLAAQHRPGSSLG*VPGGHGRGLRSVQH
Trigger: ATGCTGCACTGACCTTAGCCCTCGTCCGTGCCCTCCTGGAACTCAGCCGAGGCTGCTCCCGGGCCTGTGCTGAGCAGCTAAGTCTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 90 bp CTGGGCACACAGGTTGGCGAGGATCAGAATGGTTCCCTCGCGTACTaGCCGCTTGGGGTGGGAAGCCAGGCTGACGAGTGGGCCCAATCC +
Preference number: 5 (lower is better)
Translates to: LGTQVGEDQNGSLAY*PLGVGSQADEWAQS
Trigger: GGATTGGGCCCACTCGTCAGCCTGGCTTCCCACCCCAAGCGGGCAGTACGCGAGGGAACCATTCTGATCCTCGCCAACCTGTGTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 90 bp CCGGAGCTCATCTACCAGCACCTCCACGCCACCAGCATTGCCCAGTaGAGGCCGAATCAGGCCCTGGGCACACAGGTTGGCGAGGATCAG +
Preference number: 5 (lower is better)
Translates to: PELIYQHLHATSIAQ*RPNQALGTQVGEDQ
Trigger: CTGATCCTCGCCAACCTGTGTGCCCAGGGCCTGATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGGAGGTGCTGGTAGATGAGCTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 90 bp CTCGGAGATCAGCCACGACCTGAGGCTCCGGAAGCTTCCACCCTGTaGCCGCTCAGGGGTCCTCTCCTCAGGAAAGTCCCAGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: LGDQPRPEAPEASTL*PLRGPLLRKVPGSS
Trigger: GCTGCTTCCTGGGACTTTCCTGAGGAGAGGACCCCTGAGCGGGCACAGGGTGGAAGCTTCCGGAGCCTCAGGTCGTGGCTGATCTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS GCA 90 bp CGCGGCAGTACCTTAATCGCAGCGCATCCTGGGACGTGCGGGCGGTaGATGAGGGAGATGTGGTCCGCGTCGAGCTTCTCACGCCTACCT +
Preference number: 5 (lower is better)
Translates to: RGSTLIAAHPGTCGR*MREMWSASSFSRLP
Trigger: AGGTAGGCGTGAGAAGCTCGACGCGGACCACATCTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGCTGCGATTAAGGTACTGCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS GCA 90 bp CACACGAGGCGCGGCAGTACCTTAATCGCAGCGCATCCTGGGACGTaGGGGCGGTGCATGAGGGAGATGTGGTCCGCGTCGAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: HTRRGSTLIAAHPGT*GRCMREMWSASSFS
Trigger: TGAGAAGCTCGACGCGGACCACATCTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGCTGCGATTAAGGTACTGCCGCGCCTCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS CCA 90 bp TCAGACTCCGCCCCGCTTCTCGCCGCTGATCCCAGGGAGCGGAACTaGAAGACAGGGAAATCGTCGGGCACCGCCTCGCTGACGCTGTTT +
Preference number: 5 (lower is better)
Translates to: SDSAPLLAADPRERN*KTGKSSGTASLTLF
Trigger: AAACAGCGTCAGCGAGGCGGTGCCCGACGATTTCCCTGTCTTCCAGTTCCGCTCCCTGGGATCAGCGGCGAGAAGCGGGGCGGAGTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CAA 90 bp CTCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCGAGGGTGCCATGCGCTaGCACGAGGGTCCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: LWAVLLLWALHPEPGLGFEGAMR*HEGPAA
Trigger: TGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCTC...GAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS TCA 90 bp GCTGGACCCCGGTGTCCCGAGTGTCCTCCGCTCTGGACGTGCTCGTaGGCTCAGGAGCTGGCATCTAGGAAACGGGGAGTTCTTCACTCG +
Preference number: 5 (lower is better)
Translates to: AGPRCPECPPLWTCS*AQELASRKRGVLHS
Trigger: CGAGTGAAGAACTCCCCGTTTCCTAGATGCCAGCTCCTGAGCTCACGAGCACGTCCAGAGCGGAGGACACTCGGGACACCGGGGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS GCA 90 bp AGGGAGCGGAACTTAATCGCAGCGCATCCTGGGACGTGCGGGCGGTaGATGAGGGAGATGTGGTCCGCGTCGAGCTTCTCACGCCTACCT +
Preference number: 5 (lower is better)
Translates to: RERNLIAAHPGTCGR*MREMWSASSFSRLP
Trigger: AGGTAGGCGTGAGAAGCTCGACGCGGACCACATCTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGCTGCGATTAAGTTCCGCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563544.5
CDS GCA 90 bp GCTGATCCCAGGGAGCGGAACTTAATCGCAGCGCATCCTGGGACGTaGGGGCGGTGCATGAGGGAGATGTGGTCCGCGTCGAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: ADPRERNLIAAHPGT*GRCMREMWSASSFS
Trigger: TGAGAAGCTCGACGCGGACCACATCTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGCTGCGATTAAGTTCCGCTCCCTGGGATCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563544.5
CDS CCA 90 bp TTGGCGAGGATCAGAATGGTTCCCTCGCGTACTGCCCGCTTGGGGTaGGAAGCCAGGCTGACGAGTGGGCCCAATCCCCCACCCAGACTT +
Preference number: 5 (lower is better)
Translates to: LARIRMVPSRTARLG*EARLTSGPNPPPRL
Trigger: AAGTCTGGGTGGGGGATTGGGCCCACTCGTCAGCCTGGCTTCCCACCCCAAGCGGGCAGTACGCGAGGGAACCATTCTGATCCTCGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CCA 90 bp CAGCATTGCCCAGTGCAGGCCGAATCAGGCCCTGGGCACACAGGTTaGCGAGGATCAGAATGGTTCCCTCGCGTACTGCCCGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: QHCPVQAESGPGHTG*RGSEWFPRVLPAWG
Trigger: ACCCCAAGCGGGCAGTACGCGAGGGAACCATTCTGATCCTCGCCAACCTGTGTGCCCAGGGCCTGATTCGGCCTGCACTGGGCAATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp CTCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTTCGCAGCCGCCATCTaGGCTCGGGCCTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: LWAVLLLWALHPEPGLGFFAAAI*ARASDS
Trigger: GGAGTCTGAGGCCCGAGCCAAGATGGCGGCTGCGAA...GAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR CAA 90 bp GCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCTTCGCAGCCGCCATCTaGGCTCGGGCCTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: AVLLLWALHPEPGLGFSLFAAAI*ARASDS
Trigger: GGAGTCTGAGGCCCGAGCCAAGATGGCGGCTGCGAA...GAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR CAA 90 bp GAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACGCCAAGTCCAGCGTCTaGCGCAGGCGCACTGGCGGC +
Preference number: 5 (lower is better)
Translates to: EDPSQPIHPWVPFPGDVNAKSSV*RRRTGG
Trigger: GCCGCCAGTGCGCCTGCGCAAGACGCTGGACTTGGC...GTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp CTCTGGGCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCCGCAGTCGGGCCCGGTaGATGGCCTCACGACATAGG +
Preference number: 5 (lower is better)
Translates to: LWAVLLLWALHPEPGLGFRSRAR*MASRHR
Trigger: CCTATGTCGTGAGGCCATCAACCGGGCCCGACTGCG...GAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGCCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
CDS-3UTR CAA 90 bp TCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGGAGGGTGCCATGCGCTaGCACGAGGGTCCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: SGRILHSQFILGSPSQGTEGAMR*HEGPAA
Trigger: TGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCTC...CGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCAGCGGCCCGGAGTGCGTaGGGTGCGTGGTGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPAARSA*GAWCPQ
Trigger: CTGCGGGCACCACGCACCCAACGCACTCCGGGCCGC...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp TGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCACCCAGAACCTGGCCTaGGCTTCTCGCTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: CSASLGPTPRTWPWLLAPTQNLA*ASRSRV
Trigger: GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT...GGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS CCA 90 bp ACCTCCACGCCACCAGCATTGCCCAGTGCAGGCCGAATCAGGCCCTaGGCACACAGGTTGGCGAGGATCAGAATGGTTCCCTCGCGTACT +
Preference number: 5 (lower is better)
Translates to: TSTPPALPSAGRIRP*AHRLARIRMVPSRT
Trigger: AGTACGCGAGGGAACCATTCTGATCCTCGCCAACCTGTGTGCCCAGGGCCTGATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp CCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTGCCAAGTCCAGCGTCTaGCGCAGGCGCACTGGCGGC +
Preference number: 5 (lower is better)
Translates to: PGSLDRHLGVRFHVLTAPAKSSV*RRRTGG
Trigger: GCCGCCAGTGCGCCTGCGCAAGACGCTGGACTTGGC...AGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp GCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCTCGCGTACTGCCCGCTaGGGGTGGGAAGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: AQPPPLPVSGRILHSQFISRTAR*GWEARL
Trigger: CAGCCTGGCTTCCCACCCCAAGCGGGCAGTACGCGA...GATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGTCGCGTACTGCCCGCTaGGGGTGGGAAGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: ASSLASLREDPSQPIHPWSRTAR*GWEARL
Trigger: CAGCCTGGCTTCCCACCCCAAGCGGGCAGTACGCGA...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGTCGCGTACTGCCCGCTaGGGGTGGGAAGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRSRTAR*GWEARL
Trigger: CAGCCTGGCTTCCCACCCCAAGCGGGCAGTACGCGA...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp GGTCTTGGAGGCAGGAAAGGGAGTCCGCGGCAAAGAAGAGGAAGAGCGGGTGTGTCCACGCCACCAGCATaGCCCAGTGCAGGCCGAATC +
Preference number: 5 (lower is better)
Translates to: GLGGRKGSPRQRRGRAGVSTPPA*PSAGRI
Trigger: GATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGGA...CACACCCGCTCTTCCTCTTCTTTGCCGCGGACTCCCTTTCCTGCCTCCAAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS-3UTR CAA 90 bp GAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACGAGGGTGCCATGCGCTaGCACGAGGGTCCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: EDPSQPIHPWVPFPGDVNEGAMR*HEGPAA
Trigger: TGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCTC...GTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp TCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGACAGCCAATTCATCCTaGGGTCCCCTTCCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SASLGPTPRTWPWLLAPGTANSS*GPLPRG
Trigger: TCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGT...CCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS TCA 90 bp GATCCCAGGGAGCGGAACGAGAACGTTCGCTGCCGCTTCCTAGAGTaGCGGGCTTGTGGAATTTTCCGTTTCCGGAGCTGGACCCCGGTG +
Preference number: 5 (lower is better)
Translates to: DPRERNENVRCRFLE*RACGIFRFRSWTPV
Trigger: CACCGGGGTCCAGCTCCGGAAACGGAAAATTCCACAAGCCCGTCACTCTAGGAAGCGGCAGCGAACGTTCTCGTTCCGCTCCCTGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CAA 90 bp TCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCGCAGCCGCCATCTaGGCTCGGGCCTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: SLASLREDPSQPIHPWVPFAAAI*ARASDS
Trigger: GGAGTCTGAGGCCCGAGCCAAGATGGCGGCTGCGAA...GGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCGCCAAGTCCAGCGTCTaGCGCAGGCGCACTGGCGGC +
Preference number: 5 (lower is better)
Translates to: VILESGSMFSPLLHDDSFAKSSV*RRRTGG
Trigger: GCCGCCAGTGCGCCTGCGCAAGACGCTGGACTTGGC...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp CAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGCGCAGTCGGGCCCGGTaGATGGCCTCACGACATAGG +
Preference number: 5 (lower is better)
Translates to: QSQGGSFTANSSLGPLPRRSRAR*MASRHR
Trigger: CCTATGTCGTGAGGCCATCAACCGGGCCCGACTGCG...CCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGACGCAGTCGGGCCCGGTaGATGGCCTCACGACATAGG +
Preference number: 5 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGRSRAR*MASRHR
Trigger: CCTATGTCGTGAGGCCATCAACCGGGCCCGACTGCG...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp TTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCGAGGGTGCCATGCGCTaGCACGAGGGTCCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: LPVSGRILHSQFILGSPSEGAMR*HEGPAA
Trigger: TGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCTC...GGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp GCTGTTCTGCTTCTCTGGGCCCTACACCCAGAACCTGGCCTTGGCTTCTCGCTCTCTAGGCAGGGACCCTaGCCCCCAACTCAATCCCCA +
Preference number: 5 (lower is better)
Translates to: AVLLLWALHPEPGLGFSLSRQGP*PPTQSP
Trigger: TGGGGATTGAGTTGGGGGCAAGGGTCCCTGCCTAGA...GAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTAGGGCCCAGAGAAGCAGAACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000564900.1
CDS-3UTR CAA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGACCCAGAACCTGGCCTaGGCTTCTCGCTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: ASSLASLREDPSQPIHPWTQNLA*ASRSRV
Trigger: GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTGGTGCGGCCCGGCCTaGGGACGGACTCCGAGAACC +
Preference number: 5 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPWCGPA*GRTPRT
Trigger: GGTTCTCGGAGTCCGTCCCAAGGCCGGGCCGCACCA...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS GCA 90 bp CCAGTGTCATACAGAAACCCCACAAGGGCAGCCACAATACGAGGGTaGCATGCGCTTGCACGAGGGTCCCGCAGCAGGCCCATCAGTAGA +
Preference number: 5 (lower is better)
Translates to: PVSYRNPTRAATIRG*HALARGSRSRPISR
Trigger: TCTACTGATGGGCCTGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCTCGTATTGTGGCTGCCCTTGTGGGGTTTCTGTATGACACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp CCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATTTCGCAGCCGCCATCTaGGCTCGGGCCTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: PWLLAPGSLDRHLGVRFHFAAAI*ARASDS
Trigger: GGAGTCTGAGGCCCGAGCCAAGATGGCGGCTGCGAA...ATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTACCCAGAACCTGGCCTaGGCTTCTCGCTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: QNLALASRSRVFRSSSWSTQNLA*ASRSRV
Trigger: GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp TTCTGCTCAGCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTACCCAGAACCTGGCCTaGGCTTCTCGCTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: FCSASSLASLREDPSQPITQNLA*ASRSRV
Trigger: GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT...AATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp GTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGTGGTGCGGCCCGGCCTaGGGACGGACTCCGAGAACC +
Preference number: 5 (lower is better)
Translates to: VFRSSSWSPVPCSHRSSMWCGPA*GRTPRT
Trigger: GGTTCTCGGAGTCCGTCCCAAGGCCGGGCCGCACCA...CATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp CAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTTCCACGCCACCAGCATaGCCCAGTGCAGGCCGAATC +
Preference number: 5 (lower is better)
Translates to: QNLALASRSRVFRSSSWSSTPPA*PSAGRI
Trigger: GATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGGA...ACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp CGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCACAAGTGCCCCACTaGGGTCAGGGGCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: RSRVFRSSSWSPVPCSHRSQVPH*GQGPGK
Trigger: TTTCCCAGGCCCCTGACCCAAGTGGGGCACTTGTGA...GCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp GGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAATCTAGGCAGGGACCCTaGCCCCCAACTCAATCCCCA +
Preference number: 5 (lower is better)
Translates to: GGSFTANSSLGPLPRGRQSRQGP*PPTQSP
Trigger: TGGGGATTGAGTTGGGGGCAAGGGTCCCTGCCTAGA...TTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCACCCAGAACCTGGCCTaGGCTTCTCGCTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: VILESGSMFSPLLHDDSFTQNLA*ASRSRV
Trigger: GACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGT...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp TACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTCACTCTGGTGACAGGTaGTCTGGAGGACGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: YTQNLALASRSRVFRSSSHSGDR*SGGRAG
Trigger: CCCAGCCCGTCCTCCAGACAACCTGTCACCAGAGTG...AGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS GCA 90 bp TCATGCACTGAAGAATGGTCACCAAAGGGAGTATGCCTCCGAGTCTaGGCACTTCGGTCCGGCACGCCCCTTCCGTACAGCAATCGGCTA +
Preference number: 5 (lower is better)
Translates to: SCTEEWSPKGVCLRV*ALRSGTPLPYSNRL
Trigger: TAGCCGATTGCTGTACGGAAGGGGCGTGCCGGACCGAAGTGCGCAGACTCGGAGGCATACTCCCTTTGGTGACCATTCTTCAGTGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 90 bp TCCCCAGGGCACGGGCCGTTCGGTTCTGGATGCTGTCTGTCTTCATaGACTGAAGAATGGTCACCAAAGGGAGTATGCCTCCGAGTCTGC +
Preference number: 5 (lower is better)
Translates to: SPGHGPFGSGCCLSS*TEEWSPKGVCLRVC
Trigger: GCAGACTCGGAGGCATACTCCCTTTGGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCCGTGCCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp CCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGACCCTGGGCACACAGGTaGGCGAGGATCAGAATGGTT +
Preference number: 5 (lower is better)
Translates to: PRTWPWLLAPGSLDRHLGPWAHR*ARIRMV
Trigger: AACCATTCTGATCCTCGCCAACCTGTGTGCCCAGGG...TCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp GGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACCCTGGGCACACAGGTaGGCGAGGATCAGAATGGTT +
Preference number: 5 (lower is better)
Translates to: GGSFTANSSLGPLPRGRQPWAHR*ARIRMV
Trigger: AACCATTCTGATCCTCGCCAACCTGTGTGCCCAGGG...TTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp GGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATCCACGCCACCAGCATaGCCCAGTGCAGGCCGAATC +
Preference number: 5 (lower is better)
Translates to: GSLDRHLGVRFHVLTAPPSTPPA*PSAGRI
Trigger: GATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGGA...TGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTCCACGCCACCAGCATaGCCCAGTGCAGGCCGAATC +
Preference number: 5 (lower is better)
Translates to: VILESGSMFSPLLHDDSFSTPPA*PSAGRI
Trigger: GATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGGA...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp CCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTTCACAAGTGCCCCACTaGGGTCAGGGGCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: PGSLDRHLGVRFHVLTAPSQVPH*GQGPGK
Trigger: TTTCCCAGGCCCCTGACCCAAGTGGGGCACTTGTGA...AGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTTCTAGGCAGGGACCCTaGCCCCCAACTCAATCCCCA +
Preference number: 5 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLSRQGP*PPTQSP
Trigger: TGGGGATTGAGTTGGGGGCAAGGGTCCCTGCCTAGA...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp CCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTACAGCCAATTCATCCTaGGGTCCCCTTCCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: PLPVSGRILHSQFILGSPTANSS*GPLPRG
Trigger: TCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGT...AGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp GCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTGCAAGAGTCTCAGCCTaGGCTCCACCCTGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: APGSLDRHLGVRFHVLTAARVSA*APPCCS
Trigger: GCTGCAACAGGGTGGAGCCAAGGCTGAGACTCTTGC...AGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS TCA 90 bp AGGGCACGGGCCGTTCGGTTCTGGATGCTGTCTGTCTTCATGCACTaGAGAATGGTCACCAAAGGGAGTATGCCTCCGAGTCTGCGCACT +
Preference number: 5 (lower is better)
Translates to: RARAVRFWMLSVFMH*RMVTKGSMPPSLRT
Trigger: AGTGCGCAGACTCGGAGGCATACTCCCTTTGGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCCGTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS TCA 90 bp AAGAGGGTTAAACCTACCGAGAACGTTCGCTGCCGCTTCCTAGAGTaGCGGGCTTGTGGAATTTTCCGTTTCCGGAGCTGGACCCCGGTG +
Preference number: 5 (lower is better)
Translates to: KRVKPTENVRCRFLE*RACGIFRFRSWTPV
Trigger: CACCGGGGTCCAGCTCCGGAAACGGAAAATTCCACAAGCCCGTCACTCTAGGAAGCGGCAGCGAACGTTCTCGGTAGGTTTAACCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS CCA 90 bp GGGCCGTTCGGTTCTGGATGCTGTCTGTCTTCATGCACTGAAGAATaGTCACCAAAGGGAGTATGCCTCCGAGTCTGCGCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: GPFGSGCCLSSCTEE*SPKGVCLRVCALRS
Trigger: GGACCGAAGTGCGCAGACTCGGAGGCATACTCCCTTTGGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCCTCAGGGGTGTCTCGTaGGTCGCTGGGTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: VILESGSMFSPLLHDDSFLRGVS*VAGSFS
Trigger: GGAAAAGGACCCAGCGACCAACGAGACACCCCTGAG...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp CCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCCTGGGCACACAGGTaGGCGAGGATCAGAATGGTT +
Preference number: 5 (lower is better)
Translates to: PGSLDRHLGVRFHVLTAPPWAHR*ARIRMV
Trigger: AACCATTCTGATCCTCGCCAACCTGTGTGCCCAGGG...AGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCACAAGTGCCCCACTaGGGTCAGGGGCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPSQVPH*GQGPGK
Trigger: TTTCCCAGGCCCCTGACCCAAGTGGGGCACTTGTGA...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp GTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTTCTCTAGGCAGGGACCCTaGCCCCCAACTCAATCCCCA +
Preference number: 5 (lower is better)
Translates to: VILESGSMFSPLLHDDSFSRQGP*PPTQSP
Trigger: TGGGGATTGAGTTGGGGGCAAGGGTCCCTGCCTAGA...GAAGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp ACACCCAGAACCTGGCCTTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTACAGCCAATTCATCCTaGGGTCCCCTTCCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: TPRTWPWLLAPGSLDRHLTANSS*GPLPRG
Trigger: TCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGT...AAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAAGGCCAGGTTCTGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp CTCCACAAGCAGGGGAACAGCACCAGCACAGTGGATGTCCCCACAGCTCTCAGGGTCACAAATAACTCTTaGGCCTCCGCTAGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LHKQGNSTSTVDVPTALRVTNNS*ASASPA
Trigger: AGCTGGACTAGCGGAGGCCAAAGAGTTATTTGTGAC...CCTGAGAGCTGTGGGGACATCCACTGTGCTGGTGCTGTTCCCCTGCTTGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR CAA 90 bp TTGGCTTCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTCCCTGGGCACACAGGTaGGCGAGGATCAGAATGGTT +
Preference number: 5 (lower is better)
Translates to: LASRSRVFRSSSWSPVPCPWAHR*ARIRMV
Trigger: AACCATTCTGATCCTCGCCAACCTGTGTGCCCAGGG...ACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGAAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp AGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTTCACAAGTGCCCCACTaGGGTCAGGGGCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: RSSSWSPVPCSHRSSMMTSQVPH*GQGPGK
Trigger: TTTCCCAGGCCCCTGACCCAAGTGGGGCACTTGTGA...AGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACACAGCCAATTCATCCTaGGGTCCCCTTCCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHTANSS*GPLPRG
Trigger: TCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGT...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp TCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCATGATGACTCCTCAGGAGCTGGCATCGTaGTCCGGGTTATGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: SSSWSPVPCSHRSSMMTPQELAS*SGLWQK
Trigger: CTTCTGCCATAACCCGGACAACGATGCCAGCTCCTG...AGGAGTCATCATGGAGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CAA 90 bp TCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCCCTAGAGTGACGGGCTaGTGGAATTTTCCGTTTCCG +
Preference number: 5 (lower is better)
Translates to: SLASLREDPSQPIHPWVPPRVTG*WNFPFP
Trigger: CGGAAACGGAAAATTCCACAAGCCCGTCACTCTAGG...GGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 90 bp GTTCCATGGCTAAGTTCCCCAGGGCACGGGCCGTTCGGTTCTGGATaGTGTCTGTCTTCATGCACTGAAGAATGGTCACCAAAGGGAGTA +
Preference number: 5 (lower is better)
Translates to: VPWLSSPGHGPFGSG*CLSSCTEEWSPKGV
Trigger: TACTCCCTTTGGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCCGTGCCCTGGGGAACTTAGCCATGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS-3UTR CAA 90 bp CCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCGCTCCTCCTAGAGTGACGGGCTaGTGGAATTTTCCGTTTCCG +
Preference number: 5 (lower is better)
Translates to: PGSLDRHLGVRFHVLTAPPRVTG*WNFPFP
Trigger: CGGAAACGGAAAATTCCACAAGCCCGTCACTCTAGG...AGGAGCGGTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS-3UTR CAA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACGAGTTTTGTGCACAGTaGGAATCTGCTGCGGCACCA +
Preference number: 5 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHEFCAQ*ESAAAP
Trigger: TGGTGCCGCAGCAGATTCCAACTGTGCACAAAACTC...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CAA 90 bp TCTCGCTCCCGGGTCTTTAGATCGTCATCTTGGAGTCCGGTTCCATGTTCTCACCCTAGAGTGACGGGCTaGTGGAATTTTCCGTTTCCG +
Preference number: 5 (lower is better)
Translates to: SRSRVFRSSSWSPVPCSHPRVTG*WNFPFP
Trigger: CGGAAACGGAAAATTCCACAAGCCCGTCACTCTAGG...GTGAGAACATGGAACCGGACTCCAAGATGACGATCTAAAGACCCGGGAGCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 90 bp CCTGTTGCAGCACCTGCGCTCCACATGGGTGAGAAGGCCTCTAAGTaGCTTGTTTGTAGTAAGAGTTTTGTGCACAGTTGGAATCTGCTG +
Preference number: 5 (lower is better)
Translates to: PVAAPALHMGEKASK*LVCSKSFVHSWNLL
Trigger: CAGCAGATTCCAACTGTGCACAAAACTCTTACTACAAACAAGGCACTTAGAGGCCTTCTCACCCATGTGGAGCGCAGGTGCTGCAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CAA 90 bp GAGGATCCTTCACAGCCAATTCATCCTTGGGTCCCCTTCCCAGGGGACGTCAACAGGCCTCTAAGTGCCTaGTTTGTAGTAAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: EDPSQPIHPWVPFPGDVNRPLSA*FVVRVL
Trigger: CAAAACTCTTACTACAAACAAGGCACTTAGAGGCCT...GTTGACGTCCCCTGGGAAGGGGACCCAAGGATGAATTGGCTGTGAAGGATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS-3UTR CAA 90 bp TCTTTGGCCTCCGCTAGTCCAGCTTCGAAAGAAGTCCTCAACAACCAATTCCTAACGGGGCACAACAGATaGAGAAACAGGAGCGATGCG +
Preference number: 5 (lower is better)
Translates to: SLASASPASKEVLNNQFLTGHNR*RNRSDA
Trigger: CGCATCGCTCCTGTTTCTCAATCTGTTGTGCCCCGT...TAGGAATTGGTTGTTGAGGACTTCTTTCGAAGCTGGACTAGCGGAGGCCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS-3UTR CAA 90 bp GCCTCCTCCCTTGCCAGTCTCAGGGAGGATCCTTCACAGCCAATTCATCCTTGGTTTGTAGTAAGAGTTTaGTGCACAGTTGGAATCTGC +
Preference number: 5 (lower is better)
Translates to: ASSLASLREDPSQPIHPWFVVRV*CTVGIC
Trigger: GCAGATTCCAACTGTGCACAAAACTCTTACTACAAA...CCAAGGATGAATTGGCTGTGAAGGATCCTCCCTGAGACTGGCAAGGGAGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS GCA 90 bp AGTGCCTTGTTTGTAGTAAGAGTTTTGTGCACAGTTGGAATCTGCTaGGGCACCAGCACAGTCACAAAGTCCGGAAACCTGATGCTTGGT +
Preference number: 5 (lower is better)
Translates to: SALFVVRVLCTVGIC*GTSTVTKSGNLMLG
Trigger: ACCAAGCATCAGGTTTCCGGACTTTGTGACTGTGCTGGTGCCGCAGCAGATTCCAACTGTGCACAAAACTCTTACTACAAACAAGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS CCA 90 bp AAGGCCTCTAAGTGCCTTGTTTGTAGTAAGAGTTTTGTGCACAGTTaGAATCTGCTGCGGCACCAGCACAGTCACAAAGTCCGGAAACCT +
Preference number: 5 (lower is better)
Translates to: KASKCLVCSKSFVHS*NLLRHQHSHKVRKP
Trigger: AGGTTTCCGGACTTTGTGACTGTGCTGGTGCCGCAGCAGATTCCAACTGTGCACAAAACTCTTACTACAAACAAGGCACTTAGAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS GCA 90 bp CTAAGTGCCTTGTTTGTAGTAAGAGTTTTGTGCACAGTTGGAATCTaGTGCGGCACCAGCACAGTCACAAAGTCCGGAAACCTGATGCTT +
Preference number: 5 (lower is better)
Translates to: LSALFVVRVLCTVGI*CGTSTVTKSGNLML
Trigger: AAGCATCAGGTTTCCGGACTTTGTGACTGTGCTGGTGCCGCAGCAGATTCCAACTGTGCACAAAACTCTTACTACAAACAAGGCACTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS GCA 90 bp TCACAAAGCACGTTATTCCGGGATAGGACACAAAGAACTCCAGACTaGCCGGGTCTAGAGAGCAAGGGAGTTGCAAACCTAATCTTTCTA +
Preference number: 5 (lower is better)
Translates to: SQSTLFRDRTQRTPD*PGLESKGVANLIFL
Trigger: TAGAAAGATTAGGTTTGCAACTCCCTTGCTCTCTAGACCCGGGCAGTCTGGAGTTCTTTGTGTCCTATCCCGGAATAACGTGCTTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564514.2
CDS CCA 72 bp TCGATGGCGGCGGCGGGGCTGCGGCCCGGAGTGCGTTaGGTGCGTGGTGCCCGCAGCGAGGTCGGGGTCGGG +
Preference number: 6 (lower is better)
Translates to: SMAAAGLRPGVR*VRGARSEVGVG
Trigger: CCCGACCCCGACCTCGCTGCGGGCACCACGCACCCAACGCACTCCGGGCCGCAGCCCCGCCGCCGCCATCGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS CCA 72 bp GCAGGGCTGGCCCTTCGCGTCCCCAAGGCTCCTCGATaGCGGCGGCGGGGCTGCGGCCCGGAGTGCGTTGGG +
Preference number: 6 (lower is better)
Translates to: AGLALRVPKAPR*RRRGCGPECVG
Trigger: CCCAACGCACTCCGGGCCGCAGCCCCGCCGCCGCCATCGAGGAGCCTTGGGGACGCGAAGGGCCAGCCCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS GCA 72 bp ACAGCCCAGAAGTCCGACCACGGAGCCTTCGTGCCGTaGCCCGCCCCCGGCGTGCACTCGGCGGGGACCGCC +
Preference number: 6 (lower is better)
Translates to: TAQKSDHGAFVP*PAPGVHSAGTA
Trigger: GGCGGTCCCCGCCGAGTGCACGCCGGGGGCGGGGCACGGCACGAAGGCTCCGTGGTCGGACTTCTGGGCTGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS GCA 72 bp TCCCCACCCAGAGCCTCCCCGGCCGCCGCCGCGAGCTaGGCGAGGCAGAACGAGAGCGAGTCCGTGAGGGTT +
Preference number: 6 (lower is better)
Translates to: SPPRASPAAAAS*ARQNESESVRV
Trigger: AACCCTCACGGACTCGCTCTCGTTCTGCCTCGCGCAGCTCGCGGCGGCGGCCGGGGAGGCTCTGGGTGGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CCA 72 bp GCCTCTCCCCCAGCTCTCGGTGCCGGCTGTGGAGAGTaGGCCGGGCACGTGGTGCCGGCCAATCGTCAGGCG +
Preference number: 6 (lower is better)
Translates to: ASPPALGAGCGE*AGHVVPANRQA
Trigger: CGCCTGACGATTGGCCGGCACCACGTGCCCGGCCCACTCTCCACAGCCGGCACCGAGAGCTGGGGGAGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000563544.5
ENST00000564900.1
CDS TCA 72 bp GGCTCGGGCCTCAGACTCCGCCCCGCTTCTCGCCGCTaGTCCCAGGGAGCGGAACGAGAACGTTCGCTGCCG +
Preference number: 6 (lower is better)
Translates to: GSGLRLRPASRR*SQGAERERSLP
Trigger: CGGCAGCGAACGTTCTCGTTCCGCTCCCTGGGATCAGCGGCGAGAAGCGGGGCGGAGTCTGAGGCCCGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS GCA 72 bp GCGGGGCTGGCCGGCTCCATGGGCTCCGGCGGACACTaGTCAGGAGACCAGTCGGGGGAGATGTCATCAGGG +
Preference number: 6 (lower is better)
Translates to: AGLAGSMGSGGH*SGDQSGEMSSG
Trigger: CCCTGATGACATCTCCCCCGACTGGTCTCCTGAGCAGTGTCCGCCGGAGCCCATGGAGCCGGCCAGCCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS GCA 72 bp CAGAATGCGCAGTGCACGTGGGCTGGGCGGGCCCGGTaGGCCGGTCACATAGGTCAGCAGGCCGTACAGCGC +
Preference number: 6 (lower is better)
Translates to: QNAQCTWAGRAR*AGHIGQQAVQR
Trigger: GCGCTGTACGGCCTGCTGACCTATGTGACCGGCGCACCGGGCCCGCCCAGCCCACGTGCACTGCGCATTCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS CCA 72 bp GGAACTCACCCAGCTCTCGGTGCCGGCTGTGGAGAGTaGGCCGGGCACGTGGTGCCGGCCAATCGTCAGGCG +
Preference number: 6 (lower is better)
Translates to: GTHPALGAGCGE*AGHVVPANRQA
Trigger: CGCCTGACGATTGGCCGGCACCACGTGCCCGGCCCACTCTCCACAGCCGGCACCGAGAGCTGGGTGAGTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS TCA 72 bp CCGCGAGCTGCGCGAGGCAGAACGAGAGCGAGTCCGTaGGGGTTGGCTTCGCAGCCGCCATCTTGGCTCGGG +
Preference number: 6 (lower is better)
Translates to: PRAARGRTRASP*GLASQPPSWLG
Trigger: CCCGAGCCAAGATGGCGGCTGCGAAGCCAACCCTCACGGACTCGCTCTCGTTCTGCCTCGCGCAGCTCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS TCA 72 bp GAAGGCCTCGAGGCAGGCAGGGTTGCAGGTGAGGCGTaGCAGAATGCGCAGTGCACGTGGGCTGGGCGGGCC +
Preference number: 6 (lower is better)
Translates to: EGLEAGRVAGEA*QNAQCTWAGRA
Trigger: GGCCCGCCCAGCCCACGTGCACTGCGCATTCTGTCACGCCTCACCTGCAACCCTGCCTGCCTCGAGGCCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS GCA 72 bp GGTCAGCAGGCCGTACAGCGCCGGGCCGGTCACAAGTaGCCCACTTGGGTCAGGGGCCTGGGAAAAGCGCGA +
Preference number: 6 (lower is better)
Translates to: GQQAVQRRAGHK*PTWVRGLGKAR
Trigger: TCGCGCTTTTCCCAGGCCCCTGACCCAAGTGGGGCACTTGTGACCGGCCCGGCGCTGTACGGCCTGCTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS CCA 72 bp GGGTATGGGAACTCACCCAGCTCTCGGTGCCGGCTGTaGAGAGTGGGCCGGGCACGTGGTGCCGGCCAATCG +
Preference number: 6 (lower is better)
Translates to: GYGNSPSSRCRL*RVGRARGAGQS
Trigger: CGATTGGCCGGCACCACGTGCCCGGCCCACTCTCCACAGCCGGCACCGAGAGCTGGGTGAGTTCCCATACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS CAA 90 bp CGGCGCTGCCGGAGCTCATCTACCAGCACCTCCACGCCACCAGCATaGCCCAGTGCAGGCCGAATCAGGCCCTGGGCACACAGGTTGGCG +
Preference number: 6 (lower is better)
Translates to: RRCRSSSTSTSTPPA*PSAGRIRPWAHRLA
Trigger: CGCCAACCTGTGTGCCCAGGGCCTGATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGGAGGTGCTGGTAGATGAGCTCCGGCAGCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS TCA 72 bp GGCTCGGGCCTCAGACTCCGCCCCGCTTCTCGCCGCTaGTCCCAGGGAGCGGAACTTAATCGCAGCGCATCC +
Preference number: 6 (lower is better)
Translates to: GSGLRLRPASRR*SQGAELNRSAS
Trigger: GGATGCGCTGCGATTAAGTTCCGCTCCCTGGGATCAGCGGCGAGAAGCGGGGCGGAGTCTGAGGCCCGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563544.5
CDS CCA 72 bp GCTGAGCGCCAAGTCCAGCGTCTTGCGCAGGCGCACTaGCGGCGTAGGACTAGACGACGACACAGCGGAGGG +
Preference number: 6 (lower is better)
Translates to: AERQVQRLAQAH*RRRTRRRHSGG
Trigger: CCCTCCGCTGTGTCGTCGTCTAGTCCTACGCCGCCAGTGCGCCTGCGCAAGACGCTGGACTTGGCGCTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CCA 72 bp CCGCGTCGAGCTTCTCACGCCTACCTCGGGAAGCGCTaGAAACTCTTCCAGGGCCCTCCAGGTGGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: PRRASHAYLGKR*KLFQGPPGGPG
Trigger: CCCTGGCCCACCTGGAGGGCCCTGGAAGAGTTTCCAGCGCTTCCCGAGGTAGGCGTGAGAAGCTCGACGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS CCA 72 bp GCCCCGCTTCTCGCCGCTGATCCCAGGGAGCGGAACTaGAAGACAGGGAAATCGTCGGGCACCGCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: APLLAADPRERN*KTGKSSGTASL
Trigger: CAGCGAGGCGGTGCCCGACGATTTCCCTGTCTTCCAGTTCCGCTCCCTGGGATCAGCGGCGAGAAGCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS TCA 72 bp CCTCGCGTACTGCCCGCTTGGGGTGGGAAGCCAGGCTaGCGAGTGGGCCCAATCCCCCACCCAGACTTAGCT +
Preference number: 6 (lower is better)
Translates to: PRVLPAWGGKPG*RVGPIPHPDLA
Trigger: AGCTAAGTCTGGGTGGGGGATTGGGCCCACTCGTCAGCCTGGCTTCCCACCCCAAGCGGGCAGTACGCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS TCA 72 bp TGCGCACGAAGGCCTCGAGGCAGGCAGGGTTGCAGGTaGGGCGTGACAGAATGCGCAGTGCACGTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: CARRPRGRQGCR*GVTECAVHVGW
Trigger: CCAGCCCACGTGCACTGCGCATTCTGTCACGCCTCACCTGCAACCCTGCCTGCCTCGAGGCCTTCGTGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS TCA 72 bp GGCTCGGGCCTCAGACTCCGCCCCGCTTCTCGCCGCTaGTCCCAGGGAGCGGAACTGGAAGACAGGGAAATC +
Preference number: 6 (lower is better)
Translates to: GSGLRLRPASRR*SQGAELEDREI
Trigger: GATTTCCCTGTCTTCCAGTTCCGCTCCCTGGGATCAGCGGCGAGAAGCGGGGCGGAGTCTGAGGCCCGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS GCA 72 bp CTGACGAGTGGGCCCAATCCCCCACCCAGACTTAGCTaGTCAGCACAGGCCCGGGAGCAGCCTCGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: LTSGPNPPPRLS*SAQAREQPRLS
Trigger: ACTCAGCCGAGGCTGCTCCCGGGCCTGTGCTGAGCAGCTAAGTCTGGGTGGGGGATTGGGCCCACTCGTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 72 bp CGCGGCAGTACCTTAATCGCAGCGCATCCTGGGACGTaGGGGCGGTGCATGAGGGAGATGTGGTCCGCGTCG +
Preference number: 6 (lower is better)
Translates to: RGSTLIAAHPGT*GRCMREMWSAS
Trigger: CGACGCGGACCACATCTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGCTGCGATTAAGGTACTGCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS CCA 72 bp CTGCGCGAGGCAGAACGAGAGCGAGTCCGTGAGGGTTaGCTTCGCAGCCGCCATCTTGGCTCGGGCCTCAGA +
Preference number: 6 (lower is better)
Translates to: LREAERERVREG*LRSRHLGSGLR
Trigger: TCTGAGGCCCGAGCCAAGATGGCGGCTGCGAAGCCAACCCTCACGGACTCGCTCTCGTTCTGCCTCGCGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CCA 72 bp GGCAGAGGACACAGCAGAACTCTGCCTGTGGGCCCATaGAGGGACTGGAACGCCCTGCTCCCCACCCCACTC +
Preference number: 6 (lower is better)
Translates to: GRGHSRTLPVGP*RDWNALLPTPL
Trigger: GAGTGGGGTGGGGAGCAGGGCGTTCCAGTCCCTCCATGGGCCCACAGGCAGAGTTCTGCTGTGTCCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS CAA 90 bp CACAGGTTGGCGAGGATCAGAATGGTTCCCTCGCGTACTGCCCGCTaGGGGTGGGAAGCCAGGCTGACGAGTGGGCCCAATCCCCCACCC +
Preference number: 6 (lower is better)
Translates to: HRLARIRMVPSRTAR*GWEARLTSGPNPPP
Trigger: GGGTGGGGGATTGGGCCCACTCGTCAGCCTGGCTTCCCACCCCAAGCGGGCAGTACGCGAGGGAACCATTCTGATCCTCGCCAACCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS TCA 72 bp GGCACGCCCCTTCCGTACAGCAATCGGCTAGGATGCTaGGCGCCAAGTCCAGCGTCTTGCGCAGGCGCACTG +
Preference number: 6 (lower is better)
Translates to: GTPLPYSNRLGC*APSPASCAGAL
Trigger: CAGTGCGCCTGCGCAAGACGCTGGACTTGGCGCTCAGCATCCTAGCCGATTGCTGTACGGAAGGGGCGTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS TCA 72 bp TTAGCTGCTCAGCACAGGCCCGGGAGCAGCCTCGGCTaGGTTCCAGGAGGGCACGGACGAGGGCTAAGGTCA +
Preference number: 6 (lower is better)
Translates to: LAAQHRPGSSLG*VPGGHGRGLRS
Trigger: TGACCTTAGCCCTCGTCCGTGCCCTCCTGGAACTCAGCCGAGGCTGCTCCCGGGCCTGTGCTGAGCAGCTAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS TCA 72 bp GATCCAAGCCACCAGCATCCCGCAGTCGGGCCCGGTTaGTGGCCTCACGACATAGGAGGCACACAGCCCGCA +
Preference number: 6 (lower is better)
Translates to: DPSHQHPAVGPG*WPHDIGGTQPA
Trigger: TGCGGGCTGTGTGCCTCCTATGTCGTGAGGCCATCAACCGGGCCCGACTGCGGGATGCTGGTGGCTTGGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 72 bp CAGCCACGACCTGAGGCTCCGGAAGCTTCCACCCTGTaGCCGCTCAGGGGTCCTCTCCTCAGGAAAGTCCCA +
Preference number: 6 (lower is better)
Translates to: QPRPEAPEASTL*PLRGPLLRKVP
Trigger: TGGGACTTTCCTGAGGAGAGGACCCCTGAGCGGGCACAGGGTGGAAGCTTCCGGAGCCTCAGGTCGTGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS GCA 72 bp AGGGAGCGGAACTTAATCGCAGCGCATCCTGGGACGTaGGGGCGGTGCATGAGGGAGATGTGGTCCGCGTCG +
Preference number: 6 (lower is better)
Translates to: RERNLIAAHPGT*GRCMREMWSAS
Trigger: CGACGCGGACCACATCTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGCTGCGATTAAGTTCCGCTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563544.5
CDS CCA 72 bp CATCCTGGGACGTGCGGGCGGTGCATGAGGGAGATGTaGTCCGCGTCGAGCTTCTCACGCCTACCTCGGGAA +
Preference number: 6 (lower is better)
Translates to: HPGTCGRCMREM*SASSFSRLPRE
Trigger: TTCCCGAGGTAGGCGTGAGAAGCTCGACGCGGACCACATCTCCCTCATGCACCGCCCGCACGTCCCAGGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS CCA 72 bp CACGAGGCGCGGCAGTACCTTAATCGCAGCGCATCCTaGGACGTGCGGGCGGTGCATGAGGGAGATGTGGTC +
Preference number: 6 (lower is better)
Translates to: HEARQYLNRSAS*DVRAVHEGDVV
Trigger: GACCACATCTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGCTGCGATTAAGGTACTGCCGCGCCTCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS CAA 72 bp AGATCCAAGCCACCAGCATCCCGCAGTCGGGCCCGGTaGATGGCCTCACGACATAGGAGGCACACAGCCCGC +
Preference number: 6 (lower is better)
Translates to: RSKPPASRSRAR*MASRHRRHTAR
Trigger: GCGGGCTGTGTGCCTCCTATGTCGTGAGGCCATCAACCGGGCCCGACTGCGGGATGCTGGTGGCTTGGATCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CAA 90 bp CCAGCATTGCCCAGTGCAGGCCGAATCAGGCCCTGGGCACACAGGTaGGCGAGGATCAGAATGGTTCCCTCGCGTACTGCCCGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: PALPSAGRIRPWAHR*ARIRMVPSRTARLG
Trigger: CCCCAAGCGGGCAGTACGCGAGGGAACCATTCTGATCCTCGCCAACCTGTGTGCCCAGGGCCTGATTCGGCCTGCACTGGGCAATGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS TCA 72 bp CGGTGTCCCGAGTGTCCTCCGCTCTGGACGTGCTCGTaGGCTCAGGAGCTGGCATCGTTGTCCGGGTTATGG +
Preference number: 6 (lower is better)
Translates to: RCPECPPLWTCS*AQELASLSGLW
Trigger: CCATAACCCGGACAACGATGCCAGCTCCTGAGCTCACGAGCACGTCCAGAGCGGAGGACACTCGGGACACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS GCA 72 bp CAGGTTGGCGAGGATCAGAATGGTTCCCTCGCGTACTaGCCGCTTGGGGTGGGAAGCCAGGCTGACGAGTGG +
Preference number: 6 (lower is better)
Translates to: QVGEDQNGSLAY*PLGVGSQADEW
Trigger: CCACTCGTCAGCCTGGCTTCCCACCCCAAGCGGGCAGTACGCGAGGGAACCATTCTGATCCTCGCCAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 72 bp ATCTACCAGCACCTCCACGCCACCAGCATTGCCCAGTaGAGGCCGAATCAGGCCCTGGGCACACAGGTTGGC +
Preference number: 6 (lower is better)
Translates to: IYQHLHATSIAQ*RPNQALGTQVG
Trigger: GCCAACCTGTGTGCCCAGGGCCTGATTCGGCCTGCACTGGGCAATGCTGGTGGCGTGGAGGTGCTGGTAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 72 bp AAACCCCACAAGGGCAGCCACAATACGAGGGTGCCATaGGCTTGCACGAGGGTCCCGCAGCAGGCCCATCAG +
Preference number: 6 (lower is better)
Translates to: KPHKGSHNTRVP*ACTRVPQQAHQ
Trigger: CTGATGGGCCTGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCTCGTATTGTGGCTGCCCTTGTGGGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 72 bp TACAGAAACCCCACAAGGGCAGCCACAATACGAGGGTaGCATGCGCTTGCACGAGGGTCCCGCAGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: YRNPTRAATIRG*HALARGSRSRP
Trigger: GGGCCTGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCTCGTATTGTGGCTGCCCTTGTGGGGTTTCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CCA 72 bp ATCAGAATGGTTCCCTCGCGTACTGCCCGCTTGGGGTaGGAAGCCAGGCTGACGAGTGGGCCCAATCCCCCA +
Preference number: 6 (lower is better)
Translates to: IRMVPSRTARLG*EARLTSGPNPP
Trigger: TGGGGGATTGGGCCCACTCGTCAGCCTGGCTTCCCACCCCAAGCGGGCAGTACGCGAGGGAACCATTCTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CCA 72 bp TCAGGCCCTGGGCACACAGGTTGGCGAGGATCAGAATaGTTCCCTCGCGTACTGCCCGCTTGGGGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: SGPGHTGWRGSE*FPRVLPAWGGK
Trigger: CTTCCCACCCCAAGCGGGCAGTACGCGAGGGAACCATTCTGATCCTCGCCAACCTGTGTGCCCAGGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CCA 72 bp GTGAGGTTCTGGGCCCATGGAAGCCATGGGGGAGGATaGGGACTCACATGGGGGCAAGGAGACGGGTGGGTA +
Preference number: 6 (lower is better)
Translates to: VRFWAHGSHGGG*GLTWGQGDGWV
Trigger: TACCCACCCGTCTCCTTGCCCCCATGTGAGTCCCCATCCTCCCCCATGGCTTCCATGGGCCCAGAACCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS CAA 72 bp CAATCGGCTAGGATGCTGAGCGCCAAGTCCAGCGTCTaGCGCAGGCGCACTGGCGGCGTAGGACTAGACGAC +
Preference number: 6 (lower is better)
Translates to: QSARMLSAKSSV*RRRTGGVGLDD
Trigger: GTCGTCTAGTCCTACGCCGCCAGTGCGCCTGCGCAAGACGCTGGACTTGGCGCTCAGCATCCTAGCCGATTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CAA 72 bp GCGAGGATCAGAATGGTTCCCTCGCGTACTGCCCGCTaGGGGTGGGAAGCCAGGCTGACGAGTGGGCCCAAT +
Preference number: 6 (lower is better)
Translates to: ARIRMVPSRTAR*GWEARLTSGPN
Trigger: ATTGGGCCCACTCGTCAGCCTGGCTTCCCACCCCAAGCGGGCAGTACGCGAGGGAACCATTCTGATCCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CAA 72 bp CCCAGTGCAGGCCGAATCAGGCCCTGGGCACACAGGTaGGCGAGGATCAGAATGGTTCCCTCGCGTACTGCC +
Preference number: 6 (lower is better)
Translates to: PSAGRIRPWAHR*ARIRMVPSRTA
Trigger: GGCAGTACGCGAGGGAACCATTCTGATCCTCGCCAACCTGTGTGCCCAGGGCCTGATTCGGCCTGCACTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CAA 90 bp TCCGTACAGCAATCGGCTAGGATGCTGAGCGCCAAGTCCAGCGTCTaGCGCAGGCGCACTGGCGGCGTAGGACTAGACGACGACACAGCG +
Preference number: 6 (lower is better)
Translates to: SVQQSARMLSAKSSV*RRRTGGVGLDDDTA
Trigger: CGCTGTGTCGTCGTCTAGTCCTACGCCGCCAGTGCGCCTGCGCAAGACGCTGGACTTGGCGCTCAGCATCCTAGCCGATTGCTGTACGGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 72 bp ACCTTAATCGCAGCGCATCCTGGGACGTGCGGGCGGTaGATGAGGGAGATGTGGTCCGCGTCGAGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: TLIAAHPGTCGR*MREMWSASSFS
Trigger: TGAGAAGCTCGACGCGGACCACATCTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGCTGCGATTAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS CCA 72 bp CCACCAGCATTGCCCAGTGCAGGCCGAATCAGGCCCTaGGCACACAGGTTGGCGAGGATCAGAATGGTTCCC +
Preference number: 6 (lower is better)
Translates to: PPALPSAGRIRP*AHRLARIRMVP
Trigger: GGGAACCATTCTGATCCTCGCCAACCTGTGTGCCCAGGGCCTGATTCGGCCTGCACTGGGCAATGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CCA 72 bp AGTCCCAGAGCCACGCTCTGTAGGCACTGCGAGTCCTaGCAGGCTGTCAGGCTCTCCACAAGCAGGGGAACA +
Preference number: 6 (lower is better)
Translates to: SPRATLCRHCES*QAVRLSTSRGT
Trigger: TGTTCCCCTGCTTGTGGAGAGCCTGACAGCCTGCCAGGACTCGCAGTGCCTACAGAGCGTGGCTCTGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564900.1
CDS CAA 72 bp CCACAAGGGCAGCCACAATACGAGGGTGCCATGCGCTaGCACGAGGGTCCCGCAGCAGGCCCATCAGTAGAT +
Preference number: 6 (lower is better)
Translates to: PQGQPQYEGAMR*HEGPAAGPSVD
Trigger: ATCTACTGATGGGCCTGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCTCGTATTGTGGCTGCCCTTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CAA 90 bp ACAGAAACCCCACAAGGGCAGCCACAATACGAGGGTGCCATGCGCTaGCACGAGGGTCCCGCAGCAGGCCCATCAGTAGATCCAAGCCAC +
Preference number: 6 (lower is better)
Translates to: TETPQGQPQYEGAMR*HEGPAAGPSVDPSH
Trigger: GTGGCTTGGATCTACTGATGGGCCTGCTGCGGGACCCTCGTGCAAGCGCATGGCACCCTCGTATTGTGGCTGCCCTTGTGGGGTTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS CAA 90 bp GGAGCGGAACGAGAACGTTCGCTGCCGCTTCCTAGAGTGACGGGCTaGTGGAATTTTCCGTTTCCGGAGCTGGACCCCGGTGTCCCGAGT +
Preference number: 6 (lower is better)
Translates to: GAERERSLPLPRVTG*WNFPFPELDPGVPS
Trigger: ACTCGGGACACCGGGGTCCAGCTCCGGAAACGGAAAATTCCACAAGCCCGTCACTCTAGGAAGCGGCAGCGAACGTTCTCGTTCCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS TCA 72 bp GCTGCGGCACCAGCACAGTCACAAAGTCCGGAAACCTaGTGCTTGGTGGTGAGTGTGGCCAGACCTTCGGCC +
Preference number: 6 (lower is better)
Translates to: AAAPAQSQSPET*CLVVSVARPSA
Trigger: GGCCGAAGGTCTGGCCACACTCACCACCAAGCATCAGGTTTCCGGACTTTGTGACTGTGCTGGTGCCGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS GCA 72 bp GAAGAATGGTCACCAAAGGGAGTATGCCTCCGAGTCTaGGCACTTCGGTCCGGCACGCCCCTTCCGTACAGC +
Preference number: 6 (lower is better)
Translates to: EEWSPKGVCLRV*ALRSGTPLPYS
Trigger: GCTGTACGGAAGGGGCGTGCCGGACCGAAGTGCGCAGACTCGGAGGCATACTCCCTTTGGTGACCATTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
CDS GCA 72 bp AACTTAATCGCAGCGCATCCTGGGACGTGCGGGCGGTaGATGAGGGAGATGTGGTCCGCGTCGAGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: NLIAAHPGTCGR*MREMWSASSFS
Trigger: TGAGAAGCTCGACGCGGACCACATCTCCCTCATGCACCGCCCGCACGTCCCAGGATGCGCTGCGATTAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563544.5
CDS CCA 72 bp GTCCTCCGCTCTGGACGTGCTCGTGAGCTCAGGAGCTaGCATCTAGGAAACGGGGAGTTCTTCACTCGCAGC +
Preference number: 6 (lower is better)
Translates to: VLRSGRARELRS*HLGNGEFFTRS
Trigger: GCTGCGAGTGAAGAACTCCCCGTTTCCTAGATGCCAGCTCCTGAGCTCACGAGCACGTCCAGAGCGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS CCA 72 bp GATGGTGAGGCTGGGGTTCACAGGTCAGCGTGCTGGTaGGGAGCAGTCAGGACAGTGCTGAACCAATGGCAG +
Preference number: 6 (lower is better)
Translates to: DGEAGVHRSACW*GAVRTVLNQWQ
Trigger: CTGCCATTGGTTCAGCACTGTCCTGACTGCTCCCCACCAGCACGCTGACCTGTGAACCCCAGCCTCACCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS TCA 72 bp GAGCGGAACGAGAACGTTCGCTGCCGCTTCCTAGAGTaGCGGGCTTGTGGAATTTTCCGTTTCCGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: ERNENVRCRFLE*RACGIFRFRSW
Trigger: CCAGCTCCGGAAACGGAAAATTCCACAAGCCCGTCACTCTAGGAAGCGGCAGCGAACGTTCTCGTTCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS CAA 72 bp TCGGAAGTTGTAGTTCTCGACCCCGGAAGTCTGTCCTaGCACACGAGGCGCGGCAGTACCTTAATCGCAGCG +
Preference number: 6 (lower is better)
Translates to: SEVVVLDPGSLS*HTRRGSTLIAA
Trigger: CGCTGCGATTAAGGTACTGCCGCGCCTCGTGTGCAAGGACAGACTTCCGGGGTCGAGAACTACAACTTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457010.6
CDS TCA 72 bp AAACCTACCGAGAACGTTCGCTGCCGCTTCCTAGAGTaGCGGGCTTGTGGAATTTTCCGTTTCCGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: KPTENVRCRFLE*RACGIFRFRSW
Trigger: CCAGCTCCGGAAACGGAAAATTCCACAAGCCCGTCACTCTAGGAAGCGGCAGCGAACGTTCTCGGTAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457010.6
ENST00000563544.5
CDS GCA 72 bp CTAAGTTCCCCAGGGCACGGGCCGTTCGGTTCTGGATaGTGTCTGTCTTCATGCACTGAAGAATGGTCACCA +
Preference number: 6 (lower is better)
Translates to: LSSPGHGPFGSG*CLSSCTEEWSP
Trigger: TGGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCCGTGCCCTGGGGAACTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS GCA 72 bp CACGGGCCGTTCGGTTCTGGATGCTGTCTGTCTTCATaGACTGAAGAATGGTCACCAAAGGGAGTATGCCTC +
Preference number: 6 (lower is better)
Translates to: HGPFGSGCCLSS*TEEWSPKGVCL
Trigger: GAGGCATACTCCCTTTGGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGCCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS TCA 72 bp GCCGTTCGGTTCTGGATGCTGTCTGTCTTCATGCACTaGAGAATGGTCACCAAAGGGAGTATGCCTCCGAGT +
Preference number: 6 (lower is better)
Translates to: AVRFWMLSVFMH*RMVTKGSMPPS
Trigger: ACTCGGAGGCATACTCCCTTTGGTGACCATTCTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268314.9
ENST00000408912.7
ENST00000457010.6
ENST00000563544.5
ENST00000564900.1
CDS CAA 90 bp TTGCAGCACCTGCGCTCCACATGGGTGAGAAGGCCTCTAAGTGCCTaGTTTGTAGTAAGAGTTTTGTGCACAGTTGGAATCTGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: LQHLRSTWVRRPLSA*FVVRVLCTVGICCG
Trigger: GCCGCAGCAGATTCCAACTGTGCACAAAACTCTTACTACAAACAAGGCACTTAGAGGCCTTCTCACCCATGTGGAGCGCAGGTGCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS GCA 72 bp GCACCTGCGCTCCACATGGGTGAGAAGGCCTCTAAGTaGCTTGTTTGTAGTAAGAGTTTTGTGCACAGTTGG +
Preference number: 6 (lower is better)
Translates to: APALHMGEKASK*LVCSKSFVHSW
Trigger: CCAACTGTGCACAAAACTCTTACTACAAACAAGGCACTTAGAGGCCTTCTCACCCATGTGGAGCGCAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS GCA 72 bp TTTGTAGTAAGAGTTTTGTGCACAGTTGGAATCTGCTaGGGCACCAGCACAGTCACAAAGTCCGGAAACCTG +
Preference number: 6 (lower is better)
Translates to: FVVRVLCTVGIC*GTSTVTKSGNL
Trigger: CAGGTTTCCGGACTTTGTGACTGTGCTGGTGCCGCAGCAGATTCCAACTGTGCACAAAACTCTTACTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS CAA 72 bp CTGCGCTCCACATGGGTGAGAAGGCCTCTAAGTGCCTaGTTTGTAGTAAGAGTTTTGTGCACAGTTGGAATC +
Preference number: 6 (lower is better)
Translates to: LRSTWVRRPLSA*FVVRVLCTVGI
Trigger: GATTCCAACTGTGCACAAAACTCTTACTACAAACAAGGCACTTAGAGGCCTTCTCACCCATGTGGAGCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS GCA 72 bp TTGTTTGTAGTAAGAGTTTTGTGCACAGTTGGAATCTaGTGCGGCACCAGCACAGTCACAAAGTCCGGAAAC +
Preference number: 6 (lower is better)
Translates to: LFVVRVLCTVGI*CGTSTVTKSGN
Trigger: GTTTCCGGACTTTGTGACTGTGCTGGTGCCGCAGCAGATTCCAACTGTGCACAAAACTCTTACTACAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7
CDS CCA 72 bp AAGTGCCTTGTTTGTAGTAAGAGTTTTGTGCACAGTTaGAATCTGCTGCGGCACCAGCACAGTCACAAAGTC +
Preference number: 6 (lower is better)
Translates to: KCLVCSKSFVHS*NLLRHQHSHKV
Trigger: GACTTTGTGACTGTGCTGGTGCCGCAGCAGATTCCAACTGTGCACAAAACTCTTACTACAAACAAGGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408912.7