RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARMC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000118690

Ensembl transcript IDs: ENST00000237512.4, ENST00000368972.7, ENST00000392644.9, ENST00000414610.1, ENST00000481850.1

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTTGCCATCATAATGTTCTTGAACACCCACTCCACATGATACACTaGACTGGGCCATTTGCCCATTTAATGGTTTGTTCCAAACTACAC +
Preference number: 1 (lower is better)
Translates to: ACHHNVLEHPLHMIH*TGPFAHLMVCSKLH
Trigger: GTGTAGTTTGGAACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTCAAGAACATTATGATGGCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR CAA 90 bp GATATGATTCCCATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTaGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGA +
Preference number: 2 (lower is better)
Translates to: DMIPILQLQLKKLSY*LQAHKASRGEHGFR
Trigger: TCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATGGGAATCATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR-3UTR TCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGAGAATGAGGGAGACGTaGGTTCTCGTTTCTACTGTT +
Preference number: 2 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKRMRET*VLVSTV
Trigger: AACAGTAGAAACGAGAACTCACGTCTCCCTCATTCT...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR-3UTR GCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACGTGTTCCACTCATGTTaGCTACCCTTCTTTCTATAT +
Preference number: 2 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNVFHSC*LPFFLY
Trigger: ATATAGAAAGAAGGGTAGGCAACATGAGTGGAACAC...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR CAA 90 bp TCCAAACTACACTACAGTAAAATTGATATGATTCCCATTTTGCAGTaGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCT +
Preference number: 2 (lower is better)
Translates to: SKLHYSKIDMIPILQ*QLKKLSYLLQAHKA
Trigger: AGCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATGGGAATCATATCAATTTTACTGTAGTGTAGTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR-3UTR GCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGGTGTTCCACTCATGTTaGCTACCCTTCTTTCTATAT +
Preference number: 2 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKVFHSC*LPFFLY
Trigger: ATATAGAAAGAAGGGTAGGCAACATGAGTGGAACAC...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR CAA 90 bp GAGAATGCCTTTGTGCCTTTAACCAGAAGCCCTCTTTTCTTATTTTaGATTCCAACAATACTAAGAGCACTCGATAGTTTATTAGTAAGG +
Preference number: 2 (lower is better)
Translates to: ENAFVPLTRSPLFLF*IPTILRALDSLLVR
Trigger: CCTTACTAATAAACTATCGAGTGCTCTTAGTATTGTTGGAATCAAAAATAAGAAAAGAGGGCTTCTGGTTAAAGGCACAAAGGCATTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414610.1
3UTR-3UTR CAA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTAAGAAATTAAGTTACTaGCTCCAGGCCCACAAAGCT +
Preference number: 3 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVKKLSY*LQAHKA
Trigger: AGCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTT...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR GCA 72 bp ACACCCACTCCACATGATACACTGGACTGGGCCATTTaGCCATTTAATGGTTTGTTCCAAACTACACTACAG +
Preference number: 3 (lower is better)
Translates to: TPTPHDTLDWAI*PFNGLFQTTLQ
Trigger: CTGTAGTGTAGTTTGGAACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR-3UTR CAA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCCGTGTTCCACTCATGTaGCCTACCCTTCTTTCTATA +
Preference number: 3 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSRVPLM*PTLLSI
Trigger: TATAGAAAGAAGGGTAGGCAACATGAGTGGAACACG...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR CCA 72 bp CATAATGTTCTTGAACACCCACTCCACATGATACACTaGACTGGGCCATTTGCCCATTTAATGGTTTGTTCC +
Preference number: 3 (lower is better)
Translates to: HNVLEHPLHMIH*TGPFAHLMVCS
Trigger: GGAACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTCAAGAACATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR-3UTR CAA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACGATATGATTCCCATTTaGCAGTTGCAGCTCAAGAAA +
Preference number: 3 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNDMIPI*QLQLKK
Trigger: TTTCTTGAGCTGCAACTGCAAAATGGGAATCATATC...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR GCA 72 bp GTACAGATCCTATGTTGTAACGTGTTCCACTCATGTTaGCTACCCTTCTTTCTATATAATCTAACAGCCTTC +
Preference number: 3 (lower is better)
Translates to: VQILCCNVFHSC*LPFFLYNLTAF
Trigger: GAAGGCTGTTAGATTATATAGAAAGAAGGGTAGGCAACATGAGTGGAACACGTTACAACATAGGATCTGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR-3UTR CAA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGATTCCCATTTTGCAGTaGCAGCTCAAGAAATTAAGT +
Preference number: 3 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKIPILQ*QLKKLS
Trigger: ACTTAATTTCTTGAGCTGCAACTGCAAAATGGGAAT...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCACACGTCCTCTGCCTCTaGCGGCGGCCTCTGCGCCCT +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSHVLCL*RRPLRP
Trigger: AGGGCGCAGAGGCCGCCGTCAGAGGCAGAGGACGTG...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGCCTCTGCGCCCTGTaGTGCTCGCCTCGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSGLCAL*CSPRWP
Trigger: GGGCCAACGAGGCGAGCAGCACAGGGCGCAGAGGCC...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACCCAGGGATGCAGCGCTaGCGCGGGCGGGGTAACCCC +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHPGMQR*RGRGNP
Trigger: GGGGTTACCCCGCCCGCGCCAGCGCTGCATCCCTGG...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTCCAGGGATGCAGCGCTaGCGCGGGCGGGGTAACCCC +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVPGMQR*RGRGNP
Trigger: GGGGTTACCCCGCCCGCGCCAGCGCTGCATCCCTGG...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTCTCTGCGCCCTGTGCTaGTCGCCTCGTTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVLCALC*SPRWPT
Trigger: GGTGGGCCAACGAGGCGAGCAGCACAGGGCGCAGAG...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGCAGAAGGGCCCGCTaGGAGGCAGCCCTGAATAAG +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSGRRAR*EAALNK
Trigger: CTTATTCAGGGCTGCCTCCCAGCGGGCCCTTCTGCC...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTGGGCCCACGCCCGGGTaGATGGCAATGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCGPTPG*MAMLAS
Trigger: GCTGGCCAACATTGCCATCCACCCGGGCGTGGGCCC...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTGCTGGGAGGCAGCCCTaGATAAGCGAGCCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCAGRQP*ISEPWR
Trigger: ACGCCAGGGCTCGCTTATTCAGGGCTGCCTCCCAGC...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACTGCTGCTCGCCTCGTTaGCCCACCGGCTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHCCSPR*PTGFWE
Trigger: TTCCCAGAAGCCGGTGGGCCAACGAGGCGAGCAGCA...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAACTGTTCCATTGCCGTaGAGAGCTGGGGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSTVPLP*RAGEGH
Trigger: GTGCCCTTCCCCAGCTCTGCACGGCAATGGAACAGT...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGCTGCTCGCCTCGTTaGCCCACCGGCTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVCCSPR*PTGFWE
Trigger: TTCCCAGAAGCCGGTGGGCCAACGAGGCGAGCAGCA...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCCCACTATCCCCGGGTTaGCGGCCAGCACCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFPLSPG*RPAPGP
Trigger: TGGGCCCGGTGCTGGCCGCCAACCCGGGGATAGTGG...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGGACTGCTTTGGTTTaGAGCCTGCTCAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSGTALV*SLLRSE
Trigger: CTCAGACCTGAGCAGGCTGCAAACCAAAGCAGTCCC...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCCTCTGCGCCCTGTGCTaGTCGCCTCGTTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFLCALC*SPRWPT
Trigger: GGTGGGCCAACGAGGCGAGCAGCACAGGGCGCAGAG...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCGCTGGGAGGCAGCCCTaGATAAGCGAGCCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFAGRQP*ISEPWR
Trigger: ACGCCAGGGCTCGCTTATTCAGGGCTGCCTCCCAGC...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAAACACCCACTCCACATaGTACACTGGACTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSNTHST*YTGLGH
Trigger: ATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTT...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCACTTGTACTGTTCCATTaGCGTGCAGAGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSLVLFH*RAELGK
Trigger: CTTCCCCAGCTCTGCACGGCAATGGAACAGTACAAG...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAACCAAGCAGGCCAGCTaGCAATCAGTAGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSTKQAS*QSVGPK
Trigger: TTTGGGTCCTACTGATTGGCAGCTGGCCTGCTTGGT...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAATTGCCGTGCAGAGCTaGGGAAGGGCACTGATGTTT +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSIAVQS*GRALMF
Trigger: AAACATCAGTGCCCTTCCCCAGCTCTGCACGGCAAT...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACGGGCCCACGCCCGGGTaGATGGCAATGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNGPTPG*MAMLAS
Trigger: GCTGGCCAACATTGCCATCCACCCGGGCGTGGGCCC...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACTTCCACTGTCTTCTTTaGGTCGGAGGGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHFHCLL*VGGRKG
Trigger: TCCCTTCCTCCCTCCGACTCAAAGAAGACAGTGGAA...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGCACGTCCTCTGCCTCTaGCGGCGGCCTCTGCGCCCT +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKHVLCL*RRPLRP
Trigger: AGGGCGCAGAGGCCGCCGTCAGAGGCAGAGGACGTG...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGGGCCTCTGCGCCCTGTaGTGCTCGCCTCGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKGLCAL*CSPRWP
Trigger: GGGCCAACGAGGCGAGCAGCACAGGGCGCAGAGGCC...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACACCAAGCAGGCCAGCTaGCAATCAGTAGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHTKQAS*QSVGPK
Trigger: TTTGGGTCCTACTGATTGGCAGCTGGCCTGCTTGGT...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCATCTGGTGGGAGATGCTaGAACTTTCGGTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSSGGRC*NFRFQL
Trigger: GAGCTGAAACCGAAAGTTCCAGCATCTCCCACCAGA...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392644.9
CDS-3UTR CCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCACTTTTGGGACTGCTTTaGTTTGCAGCCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSLLGLL*FAACSG
Trigger: ACCTGAGCAGGCTGCAAACCAAAGCAGTCCCAAAAG...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACATTGCCGTGCAGAGCTaGGGAAGGGCACTGATGTTT +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHIAVQS*GRALMF
Trigger: AAACATCAGTGCCCTTCCCCAGCTCTGCACGGCAAT...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCCCACGCCCGGGTGGATaGCAATGTTGGCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFPRPGG*QCWPAH
Trigger: GTGTGCTGGCCAACATTGCCATCCACCCGGGCGTGG...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGCCACTATCCCCGGGTTaGCGGCCAGCACCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKPLSPG*RPAPGP
Trigger: TGGGCCCGGTGCTGGCCGCCAACCCGGGGATAGTGG...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACACTTGTATTCCAGCGTaGTCAGGAGCAGGCCCACTA +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHTCIPA*SGAGPL
Trigger: TAGTGGGCCTGCTCCTGACCACGCTGGAATACAAGT...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACGTTAGAAAGAGGGAATaGGCAGGGGTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHVRKRE*AGVPGR
Trigger: CCTTCCTGGAACCCCTGCCCATTCCCTCTTTCTAAC...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAAGGCCTGGAATCAGATaGCTCAAAACTGGATGCATG +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSRPGIR*LKTGCM
Trigger: CATGCATCCAGTTTTGAGTCATCTGATTCCAGGCCT...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392644.9
CDS-3UTR TCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTTCCACTGTCTTCTTTaGGTCGGAGGGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVFHCLL*VGGRKG
Trigger: TCCCTTCCTCCCTCCGACTCAAAGAAGACAGTGGAA...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTCCCCTCCATTCTTaGGATGAGATGGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSGPLHS*DEMVKM
Trigger: CATCTTTACCATCTCATCTCAAGAATGGAGGGGACC...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACGCTGGGGAAGGGCACTaGTGTTTAGGAACTTACTTC +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHAGEGH*CLGTYF
Trigger: GAAGTAAGTTCCTAAACATCAGTGCCCTTCCCCAGC...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTCTTTGGTTTGCAGCCTaGTCAGGTCTGAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVLWFAA*SGLSYW
Trigger: CCAGTAGCTCAGACCTGAGCAGGCTGCAAACCAAAG...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCACTGTTCCATTGCCGTaGAGAGCTGGGGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSTVPLP*RAGEGH
Trigger: GTGCCCTTCCCCAGCTCTGCACGGCAATGGAACAGT...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCTCAGGTCTGAGCTACTaGGGCATGATGAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSSGLSY*GMMRPS
Trigger: CGAGGGCCTCATCATGCCCCAGTAGCTCAGACCTGA...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTACTTGTATTCCAGCGTaGTCAGGAGCAGGCCCACTA +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVTCIPA*SGAGPL
Trigger: TAGTGGGCCTGCTCCTGACCACGCTGGAATACAAGT...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAAAATCGCAGACATCATaGTCCTGGGAGAGATTTCCG +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSKSQTS*SWERFP
Trigger: CGGAAATCTCTCCCAGGACCATGATGTCTGCGATTT...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTGCTGGGGAAGGGCACTaGTGTTTAGGAACTTACTTC +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVAGEGH*CLGTYF
Trigger: GAAGTAAGTTCCTAAACATCAGTGCCCTTCCCCAGC...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAAGAATGAGGGAGACGTaGGTTCTCGTTTCTACTGTT +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSRMRET*VLVSTV
Trigger: AACAGTAGAAACGAGAACTCACGTCTCCCTCATTCT...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTCTCTCTGGTGGGAGATaGTGGAACTTTCGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCLSGGR*WNFRFL
Trigger: CAGAAACCGAAAGTTCCAGCATCTCCCACCAGAGAG...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368972.7
CDS-3UTR GCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTCTGCGTCCTCTTCTTaGAGGTCAGCTTTTGGGACT +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVSASSS*RSAFGT
Trigger: AGTCCCAAAAGCTGACCTGCAAGAAGAGGACGCAGA...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTAGGAATCCTCCTCTCTaGTGGGAGATGCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVRNPPL*WEMLEL
Trigger: AAGTTCCAGCATCTCCCACCAGAGAGGAGGATTCCT...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTAATGTAGCAGTCACCTaGACTAGCAAGTGGCCCGAA +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVNVAVT*TSKWPE
Trigger: TTCGGGCCACTTGCTAGTCCAGGTGACTGCTACATT...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCGGTGGATGGCAATGTTaGCCAGCACACGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSGGWQC*PAHESA
Trigger: AGCTGACTCGTGTGCTGGCCAACATTGCCATCCACC...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTCTCCACATGATACACTaGACTGGGCCATTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVLHMIH*TGPFAH
Trigger: ATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAG...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR CAA 72 bp CCCATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTaGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: PILQLQLKKLSY*LQAHKASRGEH
Trigger: ATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGCTCCTTTATTTCACTaGAGCCTCCATCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSAPLFH*SLHHQL
Trigger: TAACTGATGATGGAGGCTTCAGTGAAATAAAGGAGC...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTGGTCCCCTCCATTCTTaGGATGAGATGGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCGPLHS*DEMVKM
Trigger: CATCTTTACCATCTCATCTCAAGAATGGAGGGGACC...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACCTCACAATCATCAAGTaGCTTGTATTCCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHLTIIK*LVFQRG
Trigger: ACCACGCTGGAATACAAGTCACTTGATGATTGTGAG...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCACATTGTTCTGCACAATaGAATCGCAGACATCATGGT +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSHCSAQ*NRRHHG
Trigger: ACCATGATGTCTGCGATTTCATTGTGCAGAACAATG...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCCCAGCAGCGCCATCATaGACCTGTGGACATTGTTCT +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSPAAPS*TCGHCS
Trigger: AGAACAATGTCCACAGGTTCATGATGGCGCTGCTGG...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTGCTGTGCCACAGGTTTaGATTCTGTTTCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVAVPQV*ILFPNG
Trigger: TCCATTGGGAAACAGAATTCAAACCTGTGGCACAGC...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCGGAGATAGCAGCGGCTaGGAGGTTCAATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSGDSSG*EVQFIL
Trigger: GAGGATGAATTGAACCTCGCAGCCGCTGCTATCTCC...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACCTGGACTGGGCCATTTaGCCATTTAATGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHLDWAI*PFNGLF
Trigger: GAACAAACCATTAAATGGGCAAATGGCCCAGTCCAG...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCACACTGGTCTTCTGCTTaGACACTGAAGGTTGATAAA +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSHWSSA*TLKVDK
Trigger: TTTATCAACCTTCAGTGTCCAAGCAGAAGACCAGTG...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGGGCAGAAGGGCCCGCTaGGAGGCAGCCCTGAATAAG +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKGRRAR*EAALNK
Trigger: CTTATTCAGGGCTGCCTCCCAGCGGGCCCTTCTGCC...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTCTGGTGGGAGATGCTaGAACTTTCGGTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVSGGRC*NFRFLK
Trigger: CTTCAGAAACCGAAAGTTCCAGCATCTCCCACCAGA...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368972.7
CDS-3UTR CCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCGGTGGATGGCAATGTTaGCCAGCACACGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFGGWQC*PAHESA
Trigger: AGCTGACTCGTGTGCTGGCCAACATTGCCATCCACC...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGCCACGCCCGGGTGGATaGCAATGTTGGCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKPRPGG*QCWPAH
Trigger: GTGTGCTGGCCAACATTGCCATCCACCCGGGCGTGG...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTAAATCGCAGACATCATaGTCCTGGGAGAGATTTCCG +
Preference number: 4 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCKSQTS*SWERFP
Trigger: CGGAAATCTCTCCCAGGACCATGATGTCTGCGATTT...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCACATGATACACTGGACTaGGCCATTTGCCCATTTAAT +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSHDTLD*AICPFN
Trigger: ATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATG...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCTGGATGCATGGAGGCTaGAGGAGGAAGGAGGTCTAT +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFWMHGG*RRKEVY
Trigger: ATAGACCTCCTTCCTCCTTCAGCCTCCATGCATCCA...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392644.9
CDS-3UTR GCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACGGGACTGCTTTGGTTTaGAGCCTGCTCAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNGTALV*SLLRSE
Trigger: CTCAGACCTGAGCAGGCTGCAAACCAAAGCAGTCCC...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTGTCTACTTCTATTTCTaGGTCCTCTTCTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVVYFYF*VLFLQV
Trigger: GACCTGCAAGAAGAGGACGCAGAAATAGAAGTAGAC...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACACAGCAGAGTTTGGATaGTCCCTTTCTCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHTAEFG*SLSLWK
Trigger: TTTCCAAAGAGAAAGGGAGCATCCAAACTCTGCTGT...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTGGTCTGGATCAAAACTaGCATCCAGTGCTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVGLDQN*HPVLVL
Trigger: AAGAACTAGCACTGGATGGCAGTTTTGATCCAGACC...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACCTCCTGTGGTGTAAATaGTCTTTGGGTTCTAACTGT +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHLLWCK*SLGSNC
Trigger: ACAGTTAGAACCCAAAGACCATTTACACCACAGGAG...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTCTTTGAGCCTCCTGTaGTGTAAATGGTCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVSLSLL*CKWSLG
Trigger: ACCCAAAGACCATTTACACCACAGGAGGCTCAAAGA...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCAGGAATCCTCCTCTCTaGTGGGAGATGCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSRNPPL*WEMLEL
Trigger: AAGTTCCAGCATCTCCCACCAGAGAGGAGGATTCCT...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTACCTGGACTAGCAAGTaGCCCGAATTAGGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVTWTSK*PELGKN
Trigger: ATTTTTGCCTAATTCGGGCCACTTGCTAGTCCAGGT...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTATAAGGCATAACATCTaGAATAGCTGGCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVIRHNI*NSWPRL
Trigger: CAGCCTTGGCCAGCTATTCCAGATGTTATGCCTTAT...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTATAAGGCATAACATCTaGAATAGCTGGCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCIRHNI*NSWPRL
Trigger: CAGCCTTGGCCAGCTATTCCAGATGTTATGCCTTAT...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTCAGACATCATGGTCCTaGGAGAGATTTCCGAAAACA +
Preference number: 4 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCQTSWS*ERFPKT
Trigger: TGTTTTCGGAAATCTCTCCCAGGACCATGATGTCTG...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCGTTAGAAAGAGGGAATaGGCAGGGGTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFVRKRE*AGVPGR
Trigger: CCTTCCTGGAACCCCTGCCCATTCCCTCTTTCTAAC...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCCTCCACATGATACACTaGACTGGGCCATTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSLHMIH*TGPFAH
Trigger: ATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAG...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTCTTCTGCTTGGACACTaGAGGTTGATAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVLLLGH*RLIKWI
Trigger: GATCCATTTTATCAACCTTCAGTGTCCAAGCAGAAG...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTCCGAATAGTTTTCTTTaGGCCTCCTGTGGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVPNSFL*ASCGVN
Trigger: ATTTACACCACAGGAGGCTCAAAGAAAACTATTCGG...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACCATCCATGTTGTTACTaGCAAGAAGCTTTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHHPCCY*QEALRA
Trigger: TGCTCTTAAAGCTTCTTGTCAGTAACAACATGGATG...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTCATTGTTCTGCACAATaGAATCGCAGACATCATGGT +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVHCSAQ*NRRHHG
Trigger: ACCATGATGTCTGCGATTTCATTGTGCAGAACAATG...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACCCAGCAGCGCCATCATaGACCTGTGGACATTGTTCT +
Preference number: 4 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNPAAPS*TCGHCS
Trigger: AGAACAATGTCCACAGGTTCATGATGGCGCTGCTGG...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACGGAGATAGCAGCGGCTaGGAGGTTCAATTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNGDSSG*EVQFIL
Trigger: GAGGATGAATTGAACCTCGCAGCCGCTGCTATCTCC...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACCTTTGGTTTGCAGCCTaGTCAGGTCTGAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNLWFAA*SGLSYW
Trigger: CCAGTAGCTCAGACCTGAGCAGGCTGCAAACCAAAG...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTCATGATGAAGTTGTGTaGAAGCAGCACAAACCGTTT +
Preference number: 4 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCHDEVV*KQHKPF
Trigger: AAACGGTTTGTGCTGCTTGCACACAACTTCATCATG...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTCTGTGGACATTGTTCTaGACAATGAAATCGCAGACA +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVLWTLF*TMKSQT
Trigger: TGTCTGCGATTTCATTGTGCAGAACAATGTCCACAG...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTATTCGGTTTAGAAGCTaGTGTGCCACAGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVIRFRS*CATGLN
Trigger: ATTCAAACCTGTGGCACAGCAGCTTCTAAACCGAAT...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTATTCGGTTTAGAAGCTaGTGTGCCACAGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCIRFRS*CATGLN
Trigger: ATTCAAACCTGTGGCACAGCAGCTTCTAAACCGAAT...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTCACTGGTCTTCTGCTTaGACACTGAAGGTTGATAAA +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVHWSSA*TLKVDK
Trigger: TTTATCAACCTTCAGTGTCCAAGCAGAAGACCAGTG...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACGCATGTCTCTTCCCCTaGTCCCCTCCATTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNACLFP*SPPFLR
Trigger: TCTCAAGAATGGAGGGGACCAGGGGAAGAGACATGC...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCCTTTTGGGACTGCTTTaGTTTGCAGCCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFLLGLL*FAACSG
Trigger: ACCTGAGCAGGCTGCAAACCAAAGCAGTCCCAAAAG...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCTTGCAGGTCAGCTTTTaGGACTGCTTTGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSLQVSF*DCFGLQ
Trigger: CTGCAAACCAAAGCAGTCCCAAAAGCTGACCTGCAA...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACATATTCTGGCAATATTaGTACAGACGTCCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHIFWQY*YRRPCH
Trigger: GTGACAAGGACGTCTGTACCAATATTGCCAGAATAT...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAAGAGTAAGAGTGTGTTaGTGTCTTCATTTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSRVRVC*CLHFQN
Trigger: GTTTTGGAAATGAAGACACCAACACACTCTTACTCT...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTCATGATACACTGGACTaGGCCATTTGCCCATTTAAT +
Preference number: 4 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCHDTLD*AICPFN
Trigger: ATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATG...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCCTCACAATCATCAAGTaGCTTGTATTCCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSLTIIK*LVFQRG
Trigger: ACCACGCTGGAATACAAGTCACTTGATGATTGTGAG...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp CTTTGCTGCTTTCATTGGATTACTGGAGAATGCCTTTGTGCCTTTAACCAGAAGGAGGGCCTCCATTCTTaGGATGAGATGGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: LCCFHWITGECLCAFNQKEGLHS*DEMVKM
Trigger: CATCTTTACCATCTCATCTCAAGAATGGAGGCCCTC...CTTCTGGTTAAAGGCACAAAGGCATTCTCCAGTAATCCAATGAAAGCAGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414610.1
CDS-3UTR GCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTTCACTTATGATTTCTaGACTGGTCTTCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVFTYDF*TGLLLG
Trigger: TCCAAGCAGAAGACCAGTGCAGAAATCATAAGTGAA...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACCTCTCTGGTGGGAGATaGTGGAACTTTCGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNLSGGR*WNFRFQ
Trigger: CTGAAACCGAAAGTTCCAGCATCTCCCACCAGAGAG...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392644.9
CDS-3UTR GCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACTCTGCGTCCTCTTCTTaGAGGTCAGCTTTTGGGACT +
Preference number: 4 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNSASSS*RSAFGT
Trigger: AGTCCCAAAAGCTGACCTGCAAGAAGAGGACGCAGA...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCCTGGACTGGGCCATTTaGCCATTTAATGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSLDWAI*PFNGLF
Trigger: GAACAAACCATTAAATGGGCAAATGGCCCAGTCCAG...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCTCTTTGAGCCTCCTGTaGTGTAAATGGTCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSSLSLL*CKWSLG
Trigger: ACCCAAAGACCATTTACACCACAGGAGGCTCAAAGA...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCTCAAAACTGGATGCATaGAGGCTGAAGGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFSKLDA*RLKEEG
Trigger: TCCTTCCTCCTTCAGCCTCCATGCATCCAGTTTTGA...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392644.9
CDS-3UTR TCA 90 bp GAGAAGGCCTGTTTGCTAGACAGACCAACAAAAATCAAGCCTATACTGCAGTGTGCTCCTTTATTTCACTaGAGCCTCCATCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: EKACLLDRPTKIKPILQCAPLFH*SLHHQL
Trigger: TAACTGATGATGGAGGCTTCAGTGAAATAAAGGAGC...ACACTGCAGTATAGGCTTGATTTTTGTTGGTCTGTCTAGCAAACAGGCCTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414610.1
CDS-3UTR TCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACGCTGTGCCACAGGTTTaGATTCTGTTTCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNAVPQV*ILFPNG
Trigger: TCCATTGGGAAACAGAATTCAAACCTGTGGCACAGC...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCAGAATGAGGGAGACGTaGGTTCTCGTTTCTACTGTT +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFRMRET*VLVSTV
Trigger: AACAGTAGAAACGAGAACTCACGTCTCCCTCATTCT...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGAACACCCACTCCACATaGTACACTGGACTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKNTHST*YTGLGH
Trigger: ATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTT...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCGTCTACTTCTATTTCTaGGTCCTCTTCTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFVYFYF*VLFLQV
Trigger: GACCTGCAAGAAGAGGACGCAGAAATAGAAGTAGAC...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGCTTGTACTGTTCCATTaGCGTGCAGAGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKLVLFH*RAELGK
Trigger: CTTCCCCAGCTCTGCACGGCAATGGAACAGTACAAG...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCACAGCAGAGTTTGGATaGTCCCTTTCTCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSTAEFG*SLSLWK
Trigger: TTTCCAAAGAGAAAGGGAGCATCCAAACTCTGCTGT...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCGGTCTGGATCAAAACTaGCATCCAGTGCTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFGLDQN*HPVLVL
Trigger: AAGAACTAGCACTGGATGGCAGTTTTGATCCAGACC...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGCTTCGCAGGGTCCACTaGGGGCTTAGGAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKLRRVH*GLRKGK
Trigger: TTTTCCTTTCCTAAGCCCCCAGTGGACCCTGCGAAG...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGGCATGTCTCTTCCCCTaGTCCCCTCCATTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKACLFP*SPPFLR
Trigger: TCTCAAGAATGGAGGGGACCAGGGGAAGAGACATGC...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCCAGACATCATGGTCCTaGGAGAGATTTCCGAAAACA +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFQTSWS*ERFPKT
Trigger: TGTTTTCGGAAATCTCTCCCAGGACCATGATGTCTG...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTAGAGTAAGAGTGTGTTaGTGTCTTCATTTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVRVRVC*CLHFQN
Trigger: GTTTTGGAAATGAAGACACCAACACACTCTTACTCT...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCGCTCCTTTATTTCACTaGAGCCTCCATCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFAPLFH*SLHHQL
Trigger: TAACTGATGATGGAGGCTTCAGTGAAATAAAGGAGC...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACGAATGCAGATCCAGCTaGTGGAACGTCTGGAATAAT +
Preference number: 4 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNECRSS*WNVWNN
Trigger: ATTATTCCAGACGTTCCATCAGCTGGATCTGCATTC...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCCATCCATGTTGTTACTaGCAAGAAGCTTTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSHPCCY*QEALRA
Trigger: TGCTCTTAAAGCTTCTTGTCAGTAACAACATGGATG...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCCATGATGAAGTTGTGTaGAAGCAGCACAAACCGTTT +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFHDEVV*KQHKPF
Trigger: AAACGGTTTGTGCTGCTTGCACACAACTTCATCATG...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACCTTCTGCTTGGACACTaGAGGTTGATAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNLLLGH*RLIKWI
Trigger: GATCCATTTTATCAACCTTCAGTGTCCAAGCAGAAG...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCTTCACTTATGATTTCTaGACTGGTCTTCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFFTYDF*TGLLLG
Trigger: TCCAAGCAGAAGACCAGTGCAGAAATCATAAGTGAA...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCGTGTTCCACTCATGTTaGCTACCCTTCTTTCTATAT +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFVFHSC*LPFFLY
Trigger: ATATAGAAAGAAGGGTAGGCAACATGAGTGGAACAC...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp ATTGGATTACTGGAGAATGCCTTTGTGCCTTTAACCAGAAGCCCTCTTTTCTTATGGATTACTGGAGAATaGCTTTGTGCCTTTAACCAG +
Preference number: 4 (lower is better)
Translates to: IGLLENAFVPLTRSPLFLWITGE*LCAFNQ
Trigger: CTGGTTAAAGGCACAAAGGCATTCTCCAGTAATCCA...TAAGAAAAGAGGGCTTCTGGTTAAAGGCACAAAGGCATTCTCCAGTAATCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414610.1
CDS-3UTR CCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGTTGCAGGTCAGCTTTTaGGACTGCTTTGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKLQVSF*DCFGLQ
Trigger: CTGCAAACCAAAGCAGTCCCAAAAGCTGACCTGCAA...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR TCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGGAATGCAGATCCAGCTaGTGGAACGTCTGGAATAAT +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKECRSS*WNVWNN
Trigger: ATTATTCCAGACGTTCCATCAGCTGGATCTGCATTC...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCTTTCTACTGTTAATCTaGATCATGTTAGAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSFLLLI*IMLERG
Trigger: CCCTCTTTCTAACATGATGCAGATTAACAGTAGAAA...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGACCTGGACTAGCAAGTaGCCCGAATTAGGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKTWTSK*PELGKN
Trigger: ATTTTTGCCTAATTCGGGCCACTTGCTAGTCCAGGT...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACATATTCTGGCAATATTaGTACAGACGTCCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNIFWQY*YRRPCH
Trigger: GTGACAAGGACGTCTGTACCAATATTGCCAGAATAT...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CCA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCGGTGTAAATGGTCTTTaGGTTCTAACTGTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFGVNGL*VLTVLN
Trigger: ATTAAGAACAGTTAGAACCCAAAGACCATTTACACC...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
3UTR CAA 72 bp CACTACAGTAAAATTGATATGATTCCCATTTTGCAGTaGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HYSKIDMIPILQ*QLKKLSYLLQA
Trigger: GGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATGGGAATCATATCAATTTTACTGTAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp GCCTGTTTGCTAGACAGACCAACAAAAATCAAGCCTATACTGCAGTGTAAAGTTAAATCAAGCCTATACTaGAGTGTAAAGTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: ACLLDRPTKIKPILQCKVKSSLY*SVKFAS
Trigger: TGAAGCAAACTTTACACTGCAGTATAGGCTTGATTT...AACTTTACACTGCAGTATAGGCTTGATTTTTGTTGGTCTGTCTAGCAAACAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414610.1
CDS-3UTR CCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGTCATCCTACAAAGGATaGCAAGCTAAGAAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKSSYKG*QAKKVL
Trigger: AAGCACTTTCTTAGCTTGCCATCCTTTGTAGGATGA...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGTTTCTACTGTTAATCTaGATCATGTTAGAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKFLLLI*IMLERG
Trigger: CCCTCTTTCTAACATGATGCAGATTAACAGTAGAAA...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR GCA 90 bp TTGATTCCAACAATACTAAGAGCACTCGATAGTTTATTAGTAAGGCTTTCAAGCCTGCAGTGTAAAGTTTaGTTCATGTTGTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: LIPTILRALDSLLVRLSSLQCKV*FMLCSS
Trigger: TGAACTACACAACATGAAGCAAACTTTACACTGCAG...GCTTGAAAGCCTTACTAATAAACTATCGAGTGCTCTTAGTATTGTTGGAATCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414610.1
CDS-3UTR CCA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGGGTGTAAATGGTCTTTaGGTTCTAACTGTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKGVNGL*VLTVLN
Trigger: ATTAAGAACAGTTAGAACCCAAAGACCATTTACACC...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 90 bp CCCACTATCCCCGGGTTGGCGGCCAGCACCGGGCCCACGCCCGGGTaGATGGCAATGTTGGCCAGCACACGAGTCAGCTTGATGAGCACG +
Preference number: 5 (lower is better)
Translates to: PTIPGLAASTGPTPG*MAMLASTRVSLMST
Trigger: CGTGCTCATCAAGCTGACTCGTGTGCTGGCCAACATTGCCATCCACCCGGGCGTGGGCCCGGTGCTGGCCGCCAACCCGGGGATAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS TCA 90 bp GTTGGCCAGCACACGAGTCAGCTTGATGAGCACGTCCTCTGCCTCTaGCGGCGGCCTCTGCGCCCTGTGCTGCTCGCCTCGTTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: VGQHTSQLDEHVLCL*RRPLRPVLLASLAH
Trigger: GTGGGCCAACGAGGCGAGCAGCACAGGGCGCAGAGGCCGCCGTCAGAGGCAGAGGACGTGCTCATCAAGCTGACTCGTGTGCTGGCCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS GCA 90 bp ATGAGCACGTCCTCTGCCTCTGACGGCGGCCTCTGCGCCCTGTGCTaGTCGCCTCGTTGGCCCACCGGCTTCTGGGAATGCAGATCCAGC +
Preference number: 5 (lower is better)
Translates to: MSTSSASDGGLCALC*SPRWPTGFWECRSS
Trigger: GCTGGATCTGCATTCCCAGAAGCCGGTGGGCCAACGAGGCGAGCAGCACAGGGCGCAGAGGCCGCCGTCAGAGGCAGAGGACGTGCTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS GCA 90 bp CGAGTCAGCTTGATGAGCACGTCCTCTGCCTCTGACGGCGGCCTCTaGGCCCTGTGCTGCTCGCCTCGTTGGCCCACCGGCTTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: RVSLMSTSSASDGGL*ALCCSPRWPTGFWE
Trigger: TTCCCAGAAGCCGGTGGGCCAACGAGGCGAGCAGCACAGGGCGCAGAGGCCGCCGTCAGAGGCAGAGGACGTGCTCATCAAGCTGACTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 90 bp ACTTGTATTCCAGCGTGGTCAGGAGCAGGCCCACTATCCCCGGGTTaGCGGCCAGCACCGGGCCCACGCCCGGGTGGATGGCAATGTTGG +
Preference number: 5 (lower is better)
Translates to: TCIPAWSGAGPLSPG*RPAPGPRPGGWQCW
Trigger: CCAACATTGCCATCCACCCGGGCGTGGGCCCGGTGCTGGCCGCCAACCCGGGGATAGTGGGCCTGCTCCTGACCACGCTGGAATACAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS GCA 90 bp TTGATGAGCACGTCCTCTGCCTCTGACGGCGGCCTCTGCGCCCTGTaGTGCTCGCCTCGTTGGCCCACCGGCTTCTGGGAATGCAGATCC +
Preference number: 5 (lower is better)
Translates to: LMSTSSASDGGLCAL*CSPRWPTGFWECRS
Trigger: GGATCTGCATTCCCAGAAGCCGGTGGGCCAACGAGGCGAGCAGCACAGGGCGCAGAGGCCGCCGTCAGAGGCAGAGGACGTGCTCATCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 90 bp TTTGAGTCGGAGGGAGGAAGGGATCTGTCCGGCAGAAGGGCCCGCTaGGAGGCAGCCCTGAATAAGCGAGCCCTGGCGTTGCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: FESEGGRDLSGRRAR*EAALNKRALALLTL
Trigger: AAGAGTAAGCAACGCCAGGGCTCGCTTATTCAGGGCTGCCTCCCAGCGGGCCCTTCTGCCGGACAGATCCCTTCCTCCCTCCGACTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237512.4
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACGTGCTGCTCGCCTCGTaGGCCCACCGGCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHVLLAS*AHRLLG
Trigger: TCCCAGAAGCCGGTGGGCCAACGAGGCGAGCAGCAC...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 90 bp GCGAGCCCTGGCGTTGCTTACTCTTCTAATCTTCGCAGGGTCCACTaGGGGCTTAGGAAAGGAAAAGCAGGAATCCTCCTCTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: ASPGVAYSSNLRRVH*GLRKGKAGILLSGG
Trigger: CCCACCAGAGAGGAGGATTCCTGCTTTTCCTTTCCTAAGCCCCCAGTGGACCCTGCGAAGATTAGAAGAGTAAGCAACGCCAGGGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237512.4
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCCCCACTATCCCCGGGTaGGCGGCCAGCACCGGGCCC +
Preference number: 5 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFPTIPG*AASTGP
Trigger: GGGCCCGGTGCTGGCCGCCAACCCGGGGATAGTGGG...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS TCA 90 bp TGCTCGCCTCGTTGGCCCACCGGCTTCTGGGAATGCAGATCCAGCTaGTGGAACGTCTGGAATAATGACAGCAGAGTTTGGATGCTCCCT +
Preference number: 5 (lower is better)
Translates to: CSPRWPTGFWECRSS*WNVWNNDSRVWMLP
Trigger: AGGGAGCATCCAAACTCTGCTGTCATTATTCCAGACGTTCCATCAGCTGGATCTGCATTCCCAGAAGCCGGTGGGCCAACGAGGCGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTGGGTGGATGGCAATGTaGGCCAGCACACGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVGWMAM*ASTRVS
Trigger: GCTGACTCGTGTGCTGGCCAACATTGCCATCCACCC...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGCCCACTATCCCCGGGTaGGCGGCCAGCACCGGGCCC +
Preference number: 5 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKPTIPG*AASTGP
Trigger: GGGCCCGGTGCTGGCCGCCAACCCGGGGATAGTGGG...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACCCTTGTACTGTTCCATaGCCGTGCAGAGCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHPCTVP*PCRAGE
Trigger: TTCCCCAGCTCTGCACGGCAATGGAACAGTACAAGG...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAACGTCCTTGTCACCCTaGTACTGTTCCATTGCCGTG +
Preference number: 5 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSTSLSP*YCSIAV
Trigger: CACGGCAATGGAACAGTACAAGGGTGACAAGGACGT...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAAAGCGAGCCCTGGCGTaGCTTACTCTTCTAATCTTC +
Preference number: 5 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSKRALA*LTLLIF
Trigger: GAAGATTAGAAGAGTAAGCAACGCCAGGGCTCGCTT...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCATTGGTACAGACGTCCTaGTCACCCTTGTACTGTTCC +
Preference number: 5 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSLVQTS*SPLYCS
Trigger: GGAACAGTACAAGGGTGACAAGGACGTCTGTACCAA...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCGGGTGGATGGCAATGTaGGCCAGCACACGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSGWMAM*ASTRVS
Trigger: GCTGACTCGTGTGCTGGCCAACATTGCCATCCACCC...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 90 bp CTGTGGACATTGTTCTGCACAATGAAATCGCAGACATCATGGTCCTaGGAGAGATTTCCGAAAACACGCACAGCCTCCAGGATTCCATCC +
Preference number: 5 (lower is better)
Translates to: LWTLFCTMKSQTSWS*ERFPKTRTASRIPS
Trigger: GGATGGAATCCTGGAGGCTGTGCGTGTTTTCGGAAATCTCTCCCAGGACCATGATGTCTGCGATTTCATTGTGCAGAACAATGTCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368972.7
ENST00000392644.9
ENST00000481850.1
CDS-3UTR CAA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTATTCCACTGTCTTCTTaGAGTCGGAGGGAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVIPLSS*SRREEG
Trigger: CCCTTCCTCCCTCCGACTCAAAGAAGACAGTGGAAT...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACCTTGCAGGTCAGCTTTaGGGACTGCTTTGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHLAGQL*GLLWFA
Trigger: TGCAAACCAAAGCAGTCCCAAAAGCTGACCTGCAAG...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTACGTCCTTGTCACCCTaGTACTGTTCCATTGCCGTG +
Preference number: 5 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVTSLSP*YCSIAV
Trigger: CACGGCAATGGAACAGTACAAGGGTGACAAGGACGT...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCGCTTTTGGGACTGCTTaGGTTTGCAGCCTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSAFGTA*VCSLLR
Trigger: CCTGAGCAGGCTGCAAACCAAAGCAGTCCCAAAAGC...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTCTTGCAGGTCAGCTTTaGGGACTGCTTTGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCLAGQL*GLLWFA
Trigger: TGCAAACCAAAGCAGTCCCAAAAGCTGACCTGCAAG...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACGAGCCTGGTTATTTTTaGCCGTCAGGTTGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHEPGYF*PSGCQE
Trigger: TTCTTGGCAACCTGACGGCAAAAAATAACCAGGCTC...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCAGCACACGAGTCAGCTaGATGAGCACGTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFSTRVS*MSTSSA
Trigger: GGCAGAGGACGTGCTCATCAAGCTGACTCGTGTGCT...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACTGCTGTGCCACAGGTTaGAATTCTGTTTCCCAATGG +
Preference number: 5 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHCCATG*NSVSQW
Trigger: CCATTGGGAAACAGAATTCAAACCTGTGGCACAGCA...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 90 bp CAGACGTCCTTGTCACCCTTGTACTGTTCCATTGCCGTGCAGAGCTaGGGAAGGGCACTGATGTTTAGGAACTTACTTCTTACTAATGAT +
Preference number: 5 (lower is better)
Translates to: QTSLSPLYCSIAVQS*GRALMFRNLLLTND
Trigger: ATCATTAGTAAGAAGTAAGTTCCTAAACATCAGTGCCCTTCCCCAGCTCTGCACGGCAATGGAACAGTACAAGGGTGACAAGGACGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 90 bp ATGAACCTGTGGACATTGTTCTGCACAATGAAATCGCAGACATCATaGTCCTGGGAGAGATTTCCGAAAACACGCACAGCCTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: MNLWTLFCTMKSQTS*SWERFPKTRTASRI
Trigger: AATCCTGGAGGCTGTGCGTGTTTTCGGAAATCTCTCCCAGGACCATGATGTCTGCGATTTCATTGTGCAGAACAATGTCCACAGGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368972.7
ENST00000392644.9
ENST00000481850.1
CDS-3UTR CAA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCGCTTTTGGGACTGCTTaGGTTTGCAGCCTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFAFGTA*VCSLLR
Trigger: CCTGAGCAGGCTGCAAACCAAAGCAGTCCCAAAAGC...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCCCTTGTACTGTTCCATaGCCGTGCAGAGCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFPCTVP*PCRAGE
Trigger: TTCCCCAGCTCTGCACGGCAATGGAACAGTACAAGG...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACAGCACACGAGTCAGCTaGATGAGCACGTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNSTRVS*MSTSSA
Trigger: GGCAGAGGACGTGCTCATCAAGCTGACTCGTGTGCT...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTCAATCATCAAGTGACTaGTATTCCAGCGTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCQSSSD*YSSVVR
Trigger: CCTGACCACGCTGGAATACAAGTCACTTGATGATTG...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTATTGTCGCTGTAGCATaGATCACCAGCTCCTCACAA +
Preference number: 5 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVIVAVA*ITSSSQ
Trigger: TTGTGAGGAGCTGGTGATCAATGCTACAGCGACAAT...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACCGTGTTCCACTCATGTaGCCTACCCTTCTTTCTATA +
Preference number: 5 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHRVPLM*PTLLSI
Trigger: TATAGAAAGAAGGGTAGGCAACATGAGTGGAACACG...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCTTCTGCGTCCTCTTCTaGCAGGTCAGCTTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFFCVLF*QVSFWD
Trigger: GTCCCAAAAGCTGACCTGCAAGAAGAGGACGCAGAA...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCTTGGTACAGACGTCCTaGTCACCCTTGTACTGTTCC +
Preference number: 5 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSLVQTS*SPLYCS
Trigger: GGAACAGTACAAGGGTGACAAGGACGTCTGTACCAA...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTCGTGTTCCACTCATGTaGCCTACCCTTCTTTCTATA +
Preference number: 5 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVRVPLM*PTLLSI
Trigger: TATAGAAAGAAGGGTAGGCAACATGAGTGGAACACG...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCATGCCCATTTAATGGTTaGTTCCAAACTACACTACAG +
Preference number: 5 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSCPFNG*FQTTLQ
Trigger: CTGTAGTGTAGTTTGGAACAAACCATTAAATGGGCA...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS TCA 90 bp CACCCTTGTACTGTTCCATTGCCGTGCAGAGCTGGGGAAGGGCACTaGTGTTTAGGAACTTACTTCTTACTAATGATGAATCAACCAAGT +
Preference number: 5 (lower is better)
Translates to: HPCTVPLPCRAGEGH*CLGTYFLLMMNQPS
Trigger: ACTTGGTTGATTCATCATTAGTAAGAAGTAAGTTCCTAAACATCAGTGCCCTTCCCCAGCTCTGCACGGCAATGGAACAGTACAAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAGGTATACCATTCACTATTTTCTGATGTTCTaGAGGATGCAGGTCCGAATA +
Preference number: 5 (lower is better)
Translates to: AHKASRGEHGFRFRYTIHYFLMF*RMQVRI
Trigger: TATTCGGACCTGCATCCTCAAGAACATCAGAAAATA...GTGAATGGTATACCTGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCAAGCGAGCCCTGGCGTaGCTTACTCTTCTAATCTTC +
Preference number: 5 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFKRALA*LTLLIF
Trigger: GAAGATTAGAAGAGTAAGCAACGCCAGGGCTCGCTT...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACTTCTGCGTCCTCTTCTaGCAGGTCAGCTTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNFCVLF*QVSFWD
Trigger: GTCCCAAAAGCTGACCTGCAAGAAGAGGACGCAGAA...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCCAATCATCAAGTGACTaGTATTCCAGCGTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSQSSSD*YSSVVR
Trigger: CCTGACCACGCTGGAATACAAGTCACTTGATGATTG...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCATTGTCGCTGTAGCATaGATCACCAGCTCCTCACAA +
Preference number: 5 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSIVAVA*ITSSSQ
Trigger: TTGTGAGGAGCTGGTGATCAATGCTACAGCGACAAT...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTTTCAAGATGACACGCTaGTCTTTATCCACAGTGAGA +
Preference number: 5 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCFKMTR*SLSTVR
Trigger: TCTCACTGTGGATAAAGACAAGCGTGTCATCTTGAA...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAAAGAGTAAGAGTGTGTaGGTGTCTTCATTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSKSKSV*VSSFPK
Trigger: TTTTGGAAATGAAGACACCAACACACTCTTACTCTT...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GTTACTTGCTCCAGGCCCACAAAGCTAGCAGGGGAGAGCATGGATTCAGATTCAATTCCCATTTTGCAGTaGCAGCTCAAGAAATTAAGT +
Preference number: 5 (lower is better)
Translates to: VTCSRPTKLAGESMDSDSIPILQ*QLKKLS
Trigger: ACTTAATTTCTTGAGCTGCAACTGCAAAATGGGAAT...TGAATCTGAATCCATGCTCTCCCCTGCTAGCTTTGTGGGCCTGGAGCAAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS GCA 90 bp CGGTACAATCCTTGTATTCCAAAAGACTTCGTCTACTTCTATTTCTaGGTCCTCTTCTTGCAGGTCAGCTTTTGGGACTGCTTTGGTTTG +
Preference number: 5 (lower is better)
Translates to: RYNPCIPKDFVYFYF*VLFLQVSFWDCFGL
Trigger: CAAACCAAAGCAGTCCCAAAAGCTGACCTGCAAGAAGAGGACGCAGAAATAGAAGTAGACGAAGTCTTTTGGAATACAAGGATTGTACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 90 bp GTTCTCGTTTCTACTGTTAATCTGCATCATGTTAGAAAGAGGGAATaGGCAGGGGTTCCAGGAAGGTGTGATGTCTCTGAATTCGGTTTA +
Preference number: 5 (lower is better)
Translates to: VLVSTVNLHHVRKRE*AGVPGRCDVSEFGL
Trigger: TAAACCGAATTCAGAGACATCACACCTTCCTGGAACCCCTGCCCATTCCCTCTTTCTAACATGATGCAGATTAACAGTAGAAACGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTATTTTCTGATGTTCTaGAGGATGCAGGTCCGAATA +
Preference number: 5 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVYFLMF*RMQVRI
Trigger: TATTCGGACCTGCATCCTCAAGAACATCAGAAAATA...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTGATATGATTCCCATTTaGCAGTTGCAGCTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVDMIPI*QLQLKK
Trigger: TTTCTTGAGCTGCAACTGCAAAATGGGAATCATATC...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TGTGAGAAGGCCTGTTTGCTAGACAGACCAACAAAAATCAAGCCTATACTGCAGTGTGAGAAGGCCTGTTaGCTAGACAGACCAACAAAA +
Preference number: 5 (lower is better)
Translates to: CEKACLLDRPTKIKPILQCEKAC*LDRPTK
Trigger: TTTTGTTGGTCTGTCTAGCAAACAGGCCTTCTCACA...CTGCAGTATAGGCTTGATTTTTGTTGGTCTGTCTAGCAAACAGGCCTTCTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414610.1
CDS-3UTR CAA 90 bp GAACACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTATTTCCACAGCACCTTaGCTGATCATTTCATTAAGA +
Preference number: 5 (lower is better)
Translates to: EHPLHMIHWTGPFAHLMVISTAP*LIISLR
Trigger: TCTTAATGAAATGATCAGCAAAGGTGCTGTGGAAAT...AACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCTTCAAGATGACACGCTaGTCTTTATCCACAGTGAGA +
Preference number: 5 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSFKMTR*SLSTVR
Trigger: TCTCACTGTGGATAAAGACAAGCGTGTCATCTTGAA...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACTGCTGTGCCACAGGTTaGAATTCTGTTTCCCAATGG +
Preference number: 5 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNCCATG*NSVSQW
Trigger: CCATTGGGAAACAGAATTCAAACCTGTGGCACAGCA...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CACCCACTCCACATGATACACTGGACTGGGCCATTTGCCCATTTAATGGTTTGTATTCCCATTTTGCAGTaGCAGCTCAAGAAATTAAGT +
Preference number: 5 (lower is better)
Translates to: HPLHMIHWTGPFAHLMVCIPILQ*QLKKLS
Trigger: ACTTAATTTCTTGAGCTGCAACTGCAAAATGGGAAT...ACAAACCATTAAATGGGCAAATGGCCCAGTCCAGTGTATCATGTGGAGTGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCAGGATTCCATCCATGTaGTTACTGACAAGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSRIPSM*LLTRSF
Trigger: AAAGCTTCTTGTCAGTAACAACATGGATGGAATCCT...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCATGAACCTGTGGACATaGTTCTGCACAATGAAATCG +
Preference number: 5 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFMNLWT*FCTMKS
Trigger: CGATTTCATTGTGCAGAACAATGTCCACAGGTTCAT...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCGATATGATTCCCATTTaGCAGTTGCAGCTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSDMIPI*QLQLKK
Trigger: TTTCTTGAGCTGCAACTGCAAAATGGGAATCATATC...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCAATATTCTGGCAATATaGGTACAGACGTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFNILAI*VQTSLS
Trigger: TGACAAGGACGTCTGTACCAATATTGCCAGAATATT...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCTTTCTCTTTGGAAAATaGTTCACGAGCCTGGTTATT +
Preference number: 5 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSFLFGK*FTSLVI
Trigger: AATAACCAGGCTCGTGAACAATTTTCCAAAGAGAAA...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACATGAACCTGTGGACATaGTTCTGCACAATGAAATCG +
Preference number: 5 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNMNLWT*FCTMKS
Trigger: CGATTTCATTGTGCAGAACAATGTCCACAGGTTCAT...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp CATTTTGCAGTTGCAGCTCAAGAAATTAAGTTACTTGCTCCAGGCCCACAAAGCAAGAGTAAGAGTGTGTaGGTGTCTTCATTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: HFAVAAQEIKLLAPGPQSKSKSV*VSSFPK
Trigger: TTTTGGAAATGAAGACACCAACACACTCTTACTCTT...GCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTTGAGCTGCAACTGCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp TGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTGAGTTCTCGTTTCTGCCCATTTAATGGTTaGTTCCAAACTACACTACAG +
Preference number: 5 (lower is better)
Translates to: CSRLLPVLKNEGDVSSRFCPFNG*FQTTLQ
Trigger: CTGTAGTGTAGTTTGGAACAAACCATTAAATGGGCA...GAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS TCA 90 bp TTCCGAAAACACGCACAGCCTCCAGGATTCCATCCATGTTGTTACTaGCAAGAAGCTTTAAGAGCAATTCAGCAATATATAGCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: FRKHAQPPGFHPCCY*QEALRAIQQYIAFC
Trigger: ACAAAAAGCTATATATTGCTGAATTGCTCTTAAAGCTTCTTGTCAGTAACAACATGGATGGAATCCTGGAGGCTGTGCGTGTTTTCGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368972.7
ENST00000392644.9
ENST00000481850.1
CDS GCA 90 bp TTTTCACTGAAGTTCCATAAAGTTTTACAAACCAAGCAGGCCAGCTaGCAATCAGTAGGACCCAAATCTCTTAAACAGTCCACTAACTTT +
Preference number: 5 (lower is better)
Translates to: FSLKFHKVLQTKQAS*QSVGPKSLKQSTNF
Trigger: AAAGTTAGTGGACTGTTTAAGAGATTTGGGTCCTACTGATTGGCAGCTGGCCTGCTTGGTTTGTAAAACTTTATGGAACTTCAGTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368972.7
ENST00000392644.9
ENST00000481850.1
CDS-3UTR CAA 90 bp TCCTACAAAGGATGGCAAGCTAAGAAAGTGCTTGCCATCATAATGTTCTTGAACAATATTCTGGCAATATaGGTACAGACGTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: SYKGWQAKKVLAIIMFLNNILAI*VQTSLS
Trigger: TGACAAGGACGTCTGTACCAATATTGCCAGAATATT...GTTCAAGAACATTATGATGGCAAGCACTTTCTTAGCTTGCCATCCTTTGTAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGAAGAAATTAAGTTACTaGCTCCAGGCCCACAAAGCT +
Preference number: 5 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKKKLSY*LQAHKA
Trigger: AGCTTTGTGGGCCTGGAGCAAGTAACTTAATTTCTT...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS TCA 90 bp AAAAATGTTCACGTTTGTTACCAGTTCTTAAGAATGAGGGAGACGTaGGTTCTCGTTTCTACTGTTAATCTGCATCATGTTAGAAAGAGG +
Preference number: 5 (lower is better)
Translates to: KNVHVCYQFLRMRET*VLVSTVNLHHVRKR
Trigger: CCTCTTTCTAACATGATGCAGATTAACAGTAGAAACGAGAACTCACGTCTCCCTCATTCTTAAGAACTGGTAACAAACGTGAACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGATTTCCACAGCACCTTaGCTGATCATTTCATTAAGA +
Preference number: 5 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKISTAP*LIISLR
Trigger: TCTTAATGAAATGATCAGCAAAGGTGCTGTGGAAAT...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS-3UTR CAA 90 bp AATCATTTATTCAAAGGCCAAACTCATCCTACAAAGGATGGCAAGCTAAGAAAGTTTCTCTTTGGAAAATaGTTCACGAGCCTGGTTATT +
Preference number: 5 (lower is better)
Translates to: NHLFKGQTHPTKDGKLRKFLFGK*FTSLVI
Trigger: AATAACCAGGCTCGTGAACAATTTTCCAAAGAGAAA...CTTTCTTAGCTTGCCATCCTTTGTAGGATGAGTTTGGCCTTTGAATAAATGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 72 bp CCAGCGTGGTCAGGAGCAGGCCCACTATCCCCGGGTTaGCGGCCAGCACCGGGCCCACGCCCGGGTGGATGG +
Preference number: 6 (lower is better)
Translates to: PAWSGAGPLSPG*RPAPGPRPGGW
Trigger: CCATCCACCCGGGCGTGGGCCCGGTGCTGGCCGCCAACCCGGGGATAGTGGGCCTGCTCCTGACCACGCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CAA 72 bp TCCAGCGTGGTCAGGAGCAGGCCCACTATCCCCGGGTaGGCGGCCAGCACCGGGCCCACGCCCGGGTGGATG +
Preference number: 6 (lower is better)
Translates to: SSVVRSRPTIPG*AASTGPTPGWM
Trigger: CATCCACCCGGGCGTGGGCCCGGTGCTGGCCGCCAACCCGGGGATAGTGGGCCTGCTCCTGACCACGCTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 72 bp CCCGGGTTGGCGGCCAGCACCGGGCCCACGCCCGGGTaGATGGCAATGTTGGCCAGCACACGAGTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: PGLAASTGPTPG*MAMLASTRVSL
Trigger: CAAGCTGACTCGTGTGCTGGCCAACATTGCCATCCACCCGGGCGTGGGCCCGGTGCTGGCCGCCAACCCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS GCA 72 bp TCCTCTGCCTCTGACGGCGGCCTCTGCGCCCTGTGCTaGTCGCCTCGTTGGCCCACCGGCTTCTGGGAATGC +
Preference number: 6 (lower is better)
Translates to: SSASDGGLCALC*SPRWPTGFWEC
Trigger: GCATTCCCAGAAGCCGGTGGGCCAACGAGGCGAGCAGCACAGGGCGCAGAGGCCGCCGTCAGAGGCAGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS GCA 72 bp ACGTCCTCTGCCTCTGACGGCGGCCTCTGCGCCCTGTaGTGCTCGCCTCGTTGGCCCACCGGCTTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: TSSASDGGLCAL*CSPRWPTGFWE
Trigger: TTCCCAGAAGCCGGTGGGCCAACGAGGCGAGCAGCACAGGGCGCAGAGGCCGCCGTCAGAGGCAGAGGACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CAA 90 bp CCCACGCCCGGGTGGATGGCAATGTTGGCCAGCACACGAGTCAGCTaGATGAGCACGTCCTCTGCCTCTGACGGCGGCCTCTGCGCCCTG +
Preference number: 6 (lower is better)
Translates to: PTPGWMAMLASTRVS*MSTSSASDGGLCAL
Trigger: CAGGGCGCAGAGGCCGCCGTCAGAGGCAGAGGACGTGCTCATCAAGCTGACTCGTGTGCTGGCCAACATTGCCATCCACCCGGGCGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CAA 90 bp GGGTTGGCGGCCAGCACCGGGCCCACGCCCGGGTGGATGGCAATGTaGGCCAGCACACGAGTCAGCTTGATGAGCACGTCCTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: GLAASTGPTPGWMAM*ASTRVSLMSTSSAS
Trigger: AGAGGCAGAGGACGTGCTCATCAAGCTGACTCGTGTGCTGGCCAACATTGCCATCCACCCGGGCGTGGGCCCGGTGCTGGCCGCCAACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CAA 90 bp GACTTGTATTCCAGCGTGGTCAGGAGCAGGCCCACTATCCCCGGGTaGGCGGCCAGCACCGGGCCCACGCCCGGGTGGATGGCAATGTTG +
Preference number: 6 (lower is better)
Translates to: DLYSSVVRSRPTIPG*AASTGPTPGWMAML
Trigger: CAACATTGCCATCCACCCGGGCGTGGGCCCGGTGCTGGCCGCCAACCCGGGGATAGTGGGCCTGCTCCTGACCACGCTGGAATACAAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS TCA 72 bp CACACGAGTCAGCTTGATGAGCACGTCCTCTGCCTCTaGCGGCGGCCTCTGCGCCCTGTGCTGCTCGCCTCG +
Preference number: 6 (lower is better)
Translates to: HTSQLDEHVLCL*RRPLRPVLLAS
Trigger: CGAGGCGAGCAGCACAGGGCGCAGAGGCCGCCGTCAGAGGCAGAGGACGTGCTCATCAAGCTGACTCGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 72 bp GAGGGAGGAAGGGATCTGTCCGGCAGAAGGGCCCGCTaGGAGGCAGCCCTGAATAAGCGAGCCCTGGCGTTG +
Preference number: 6 (lower is better)
Translates to: EGGRDLSGRRAR*EAALNKRALAL
Trigger: CAACGCCAGGGCTCGCTTATTCAGGGCTGCCTCCCAGCGGGCCCTTCTGCCGGACAGATCCCTTCCTCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237512.4
ENST00000368972.7
ENST00000392644.9
CDS CAA 72 bp GCCAGCACCGGGCCCACGCCCGGGTGGATGGCAATGTaGGCCAGCACACGAGTCAGCTTGATGAGCACGTCC +
Preference number: 6 (lower is better)
Translates to: ASTGPTPGWMAM*ASTRVSLMSTS
Trigger: GGACGTGCTCATCAAGCTGACTCGTGTGCTGGCCAACATTGCCATCCACCCGGGCGTGGGCCCGGTGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CAA 72 bp GGGTGGATGGCAATGTTGGCCAGCACACGAGTCAGCTaGATGAGCACGTCCTCTGCCTCTGACGGCGGCCTC +
Preference number: 6 (lower is better)
Translates to: GWMAMLASTRVS*MSTSSASDGGL
Trigger: GAGGCCGCCGTCAGAGGCAGAGGACGTGCTCATCAAGCTGACTCGTGTGCTGGCCAACATTGCCATCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CAA 90 bp AGAAGGGCCCGCTGGGAGGCAGCCCTGAATAAGCGAGCCCTGGCGTaGCTTACTCTTCTAATCTTCGCAGGGTCCACTGGGGGCTTAGGA +
Preference number: 6 (lower is better)
Translates to: RRARWEAALNKRALA*LTLLIFAGSTGGLG
Trigger: TCCTAAGCCCCCAGTGGACCCTGCGAAGATTAGAAGAGTAAGCAACGCCAGGGCTCGCTTATTCAGGGCTGCCTCCCAGCGGGCCCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237512.4
ENST00000368972.7
ENST00000392644.9
CDS CAA 72 bp CGCTGGGAGGCAGCCCTGAATAAGCGAGCCCTGGCGTaGCTTACTCTTCTAATCTTCGCAGGGTCCACTGGG +
Preference number: 6 (lower is better)
Translates to: RWEAALNKRALA*LTLLIFAGSTG
Trigger: CCCAGTGGACCCTGCGAAGATTAGAAGAGTAAGCAACGCCAGGGCTCGCTTATTCAGGGCTGCCTCCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237512.4
ENST00000368972.7
ENST00000392644.9
CDS GCA 72 bp GCAGGTCAGCTTTTGGGACTGCTTTGGTTTGCAGCCTaGTCAGGTCTGAGCTACTGGGGCATGATGAGGCCC +
Preference number: 6 (lower is better)
Translates to: AGQLLGLLWFAA*SGLSYWGMMRP
Trigger: GGGCCTCATCATGCCCCAGTAGCTCAGACCTGAGCAGGCTGCAAACCAAAGCAGTCCCAAAAGCTGACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS TCA 72 bp CGTTGGCCCACCGGCTTCTGGGAATGCAGATCCAGCTaGTGGAACGTCTGGAATAATGACAGCAGAGTTTGG +
Preference number: 6 (lower is better)
Translates to: RWPTGFWECRSS*WNVWNNDSRVW
Trigger: CCAAACTCTGCTGTCATTATTCCAGACGTTCCATCAGCTGGATCTGCATTCCCAGAAGCCGGTGGGCCAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 72 bp GGAAAAGCAGGAATCCTCCTCTCTGGTGGGAGATGCTaGAACTTTCGGTTTCTGAAGGAGGAAGGAGGTCTA +
Preference number: 6 (lower is better)
Translates to: GKAGILLSGGRC*NFRFLKEEGGL
Trigger: TAGACCTCCTTCCTCCTTCAGAAACCGAAAGTTCCAGCATCTCCCACCAGAGAGGAGGATTCCTGCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368972.7
CDS CAA 72 bp ATTCTGGCAATATTGGTACAGACGTCCTTGTCACCCTaGTACTGTTCCATTGCCGTGCAGAGCTGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: ILAILVQTSLSP*YCSIAVQSWGR
Trigger: CCTTCCCCAGCTCTGCACGGCAATGGAACAGTACAAGGGTGACAAGGACGTCTGTACCAATATTGCCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CAA 90 bp TTGCTGAATATTCTGGCAATATTGGTACAGACGTCCTTGTCACCCTaGTACTGTTCCATTGCCGTGCAGAGCTGGGGAAGGGCACTGATG +
Preference number: 6 (lower is better)
Translates to: LLNILAILVQTSLSP*YCSIAVQSWGRALM
Trigger: CATCAGTGCCCTTCCCCAGCTCTGCACGGCAATGGAACAGTACAAGGGTGACAAGGACGTCTGTACCAATATTGCCAGAATATTCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 72 bp TTGTCACCCTTGTACTGTTCCATTGCCGTGCAGAGCTaGGGAAGGGCACTGATGTTTAGGAACTTACTTCTT +
Preference number: 6 (lower is better)
Translates to: LSPLYCSIAVQS*GRALMFRNLLL
Trigger: AAGAAGTAAGTTCCTAAACATCAGTGCCCTTCCCCAGCTCTGCACGGCAATGGAACAGTACAAGGGTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 72 bp TGGACATTGTTCTGCACAATGAAATCGCAGACATCATaGTCCTGGGAGAGATTTCCGAAAACACGCACAGCC +
Preference number: 6 (lower is better)
Translates to: WTLFCTMKSQTS*SWERFPKTRTA
Trigger: GGCTGTGCGTGTTTTCGGAAATCTCTCCCAGGACCATGATGTCTGCGATTTCATTGTGCAGAACAATGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368972.7
ENST00000392644.9
ENST00000481850.1
CDS CAA 90 bp GAAGTAAGTTTGCTGAATATTCTGGCAATATTGGTACAGACGTCCTaGTCACCCTTGTACTGTTCCATTGCCGTGCAGAGCTGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: EVSLLNILAILVQTS*SPLYCSIAVQSWGR
Trigger: CCTTCCCCAGCTCTGCACGGCAATGGAACAGTACAAGGGTGACAAGGACGTCTGTACCAATATTGCCAGAATATTCAGCAAACTTACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CAA 72 bp TTGCTGAATATTCTGGCAATATTGGTACAGACGTCCTaGTCACCCTTGTACTGTTCCATTGCCGTGCAGAGC +
Preference number: 6 (lower is better)
Translates to: LLNILAILVQTS*SPLYCSIAVQS
Trigger: GCTCTGCACGGCAATGGAACAGTACAAGGGTGACAAGGACGTCTGTACCAATATTGCCAGAATATTCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS GCA 72 bp CCTTGTATTCCAAAAGACTTCGTCTACTTCTATTTCTaGGTCCTCTTCTTGCAGGTCAGCTTTTGGGACTGC +
Preference number: 6 (lower is better)
Translates to: PCIPKDFVYFYF*VLFLQVSFWDC
Trigger: GCAGTCCCAAAAGCTGACCTGCAAGAAGAGGACGCAGAAATAGAAGTAGACGAAGTCTTTTGGAATACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CCA 72 bp TCTACTGTTAATCTGCATCATGTTAGAAAGAGGGAATaGGCAGGGGTTCCAGGAAGGTGTGATGTCTCTGAA +
Preference number: 6 (lower is better)
Translates to: STVNLHHVRKRE*AGVPGRCDVSE
Trigger: TTCAGAGACATCACACCTTCCTGGAACCCCTGCCCATTCCCTCTTTCTAACATGATGCAGATTAACAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS CAA 72 bp CCGAAAACACGCACAGCCTCCAGGATTCCATCCATGTaGTTACTGACAAGAAGCTTTAAGAGCAATTCAGCA +
Preference number: 6 (lower is better)
Translates to: PKTRTASRIPSM*LLTRSFKSNSA
Trigger: TGCTGAATTGCTCTTAAAGCTTCTTGTCAGTAACAACATGGATGGAATCCTGGAGGCTGTGCGTGTTTTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368972.7
ENST00000392644.9
ENST00000481850.1
CDS CAA 90 bp ATCCCATTTATTTTCACCATAGAGTCCCCCATCATAACTGTTTCTTaGGATTCCACTGTCTTCTTTGAGTCGGAGGGAGGAAGGGATCTG +
Preference number: 6 (lower is better)
Translates to: IPFIFTIESPIITVS*DSTVFFESEGGRDL
Trigger: CAGATCCCTTCCTCCCTCCGACTCAAAGAAGACAGTGGAATCCAAAGAAACAGTTATGATGGGGGACTCTATGGTGAAAATAAATGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237512.4
ENST00000368972.7
ENST00000392644.9
CDS CAA 72 bp ATTTTCACCATAGAGTCCCCCATCATAACTGTTTCTTaGGATTCCACTGTCTTCTTTGAGTCGGAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: IFTIESPIITVS*DSTVFFESEGG
Trigger: TCCTCCCTCCGACTCAAAGAAGACAGTGGAATCCAAAGAAACAGTTATGATGGGGGACTCTATGGTGAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237512.4
ENST00000368972.7
ENST00000392644.9
ENST00000414610.1
CDS CAA 90 bp TCCACTAACTTTTTAATGCCACCTCCTTCTTTCAAGATGACACGCTaGTCTTTATCCACAGTGAGATTGAGGAGAACACCACAGGCAGAA +
Preference number: 6 (lower is better)
Translates to: STNFLMPPPSFKMTR*SLSTVRLRRTPQAE
Trigger: TTCTGCCTGTGGTGTTCTCCTCAATCTCACTGTGGATAAAGACAAGCGTGTCATCTTGAAAGAAGGAGGTGGCATTAAAAAGTTAGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368972.7
ENST00000392644.9
ENST00000481850.1
CDS GCA 72 bp AAGTTCCATAAAGTTTTACAAACCAAGCAGGCCAGCTaGCAATCAGTAGGACCCAAATCTCTTAAACAGTCC +
Preference number: 6 (lower is better)
Translates to: KFHKVLQTKQAS*QSVGPKSLKQS
Trigger: GGACTGTTTAAGAGATTTGGGTCCTACTGATTGGCAGCTGGCCTGCTTGGTTTGTAAAACTTTATGGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368972.7
ENST00000392644.9
ENST00000481850.1
CDS CAA 90 bp GAGAGATTTCCGAAAACACGCACAGCCTCCAGGATTCCATCCATGTaGTTACTGACAAGAAGCTTTAAGAGCAATTCAGCAATATATAGC +
Preference number: 6 (lower is better)
Translates to: ERFPKTRTASRIPSM*LLTRSFKSNSAIYS
Trigger: GCTATATATTGCTGAATTGCTCTTAAAGCTTCTTGTCAGTAACAACATGGATGGAATCCTGGAGGCTGTGCGTGTTTTCGGAAATCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368972.7
ENST00000392644.9
ENST00000481850.1
CDS GCA 72 bp GCATGTTTCCTTCCTCTAAAGCATGATGAAGTTGTGTaGAAGCAGCACAAACCGTTTCAATGTTTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: ACFLPLKHDEVV*KQHKPFQCFLP
Trigger: AGGAAGAAAACATTGAAACGGTTTGTGCTGCTTGCACACAACTTCATCATGCTTTAGAGGAAGGAAACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9
CDS TCA 72 bp TCTGAATTCGGTTTAGAAGCTGCTGTGCCACAGGTTTaGATTCTGTTTCCCAATGGAGTTTGTGATAGTTTT +
Preference number: 6 (lower is better)
Translates to: SEFGLEAAVPQV*ILFPNGVCDSF
Trigger: AAAACTATCACAAACTCCATTGGGAAACAGAATTCAAACCTGTGGCACAGCAGCTTCTAAACCGAATTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368972.7
ENST00000392644.9