Pregenerated sensors for ARL6IP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000170540Ensembl transcript IDs: ENST00000546206.6, ENST00000566391.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CACCCAGGAGTCACCCAAGAAGCCCGAGGGCCAGGCATCGTCGCCTaGCCAGGGAGAGAAGGGCCGGGCCCGCGGCGGGTGACAGGGACG | + |
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Preference number: 5 (lower is better) Translates to: HPGVTQEARGPGIVA*PGREGPGPRRVTGT Trigger: CGTCCCTGTCACCCGCCGCGGGCCCGGCCCTTCTCTCCCTGGGCAGGCGACGATGCCTGGCCCTCGGGCTTCTTGGGTGACTCCTGGGTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546206.6 |
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| CDS GCA 90 bp | AGTGTCTGGAGGACAAAAAGTTTGCGAGTCACTGATTTACTCAAGTaGTTTAGGTTACCAAGTTTACAGAAGTACTACAAATTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVWRTKSLRVTDLLK*FRLPSLQKYYKFWK Trigger: TTTCCAGAATTTGTAGTACTTCTGTAAACTTGGTAACCTAAAGCACTTGAGTAAATCAGTGACTCGCAAACTTTTTGTCCTCCAGACACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566391.1 |
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| CDS CAA 90 bp | GAAGGGCCGGGCCCGCGGCGGGTGACAGGGACGAGGCCGCGGTGTTaGAGCCCACGGACGTCTGGAGGCCTCGCTCGGCTCCCGGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: EGPGPRRVTGTRPRC*SPRTSGGLARLPGD Trigger: GTCCCCCGGGAGCCGAGCGAGGCCTCCAGACGTCCGTGGGCTCAAACACCGCGGCCTCGTCCCTGTCACCCGCCGCGGGCCCGGCCCTTC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546206.6 |
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| CDS CCA 72 bp | AGGGACGAGGCCGCGGTGTTTGAGCCCACGGACGTCTaGAGGCCTCGCTCGGCTCCCGGGGGACAGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RDEAAVFEPTDV*RPRSAPGGQAA Trigger: GGCTGCCTGTCCCCCGGGAGCCGAGCGAGGCCTCCAGACGTCCGTGGGCTCAAACACCGCGGCCTCGTCCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546206.6 |
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