Pregenerated sensors for ARL5A (Homo sapiens)
Ensembl gene IDs: ENSG00000162980Ensembl transcript IDs: ENST00000295087.13, ENST00000446896.7, ENST00000458140.6, ENST00000487723.1
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGCTGACCTTGAAAGCAATGAGGTCCAGATTACATTTGGAGAGTaGGAGAGGTCAAAGTTACGAGGAGAAACTTGTCTCTACCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: EADLESNEVQITFGE*ERSKLRGETCLYPA Trigger: GGCTGGGTAGAGACAAGTTTCTCCTCGTAACTTTGACCTCTCCCACTCTCCAAATGTAATCTGGACCTCATTGCTTTCAAGGTCAGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR TCA 90 bp | TACAACTGGGCAGTTGAGAGAAGACTGGAGTTTGGAGATAACCGATaGTGTGGTATTATCTCCTGTATACAAAGCAGAGCCTATTACACG | + |
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Preference number: 1 (lower is better) Translates to: YNWAVERRLEFGDNR*CGIISCIQSRAYYT Trigger: CGTGTAATAGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACTCCAGTCTTCTCTCAACTGCCCAGTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR TCA 90 bp | TCAAAGTTACGAGGAGAAACTTGTCTCTACCCAGCCTTGAAAAAGTaGTTGATGACAACATACAACTGGGCAGTTGAGAGAAGACTGGAG | + |
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Preference number: 1 (lower is better) Translates to: SKLRGETCLYPALKK*LMTTYNWAVERRLE Trigger: CTCCAGTCTTCTCTCAACTGCCCAGTTGTATGTTGTCATCAATCACTTTTTCAAGGCTGGGTAGAGACAAGTTTCTCCTCGTAACTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR TCA 90 bp | TGCTCTCTAATGAGCAAAGTCCAAATCACTACCTCAAGCCAGTGGTaGGAAGATAGCAAGGAACTAGAAAAGCTACATAGAAACCACTGG | + |
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Preference number: 1 (lower is better) Translates to: CSLMSKVQITTSSQW*EDSKELEKLHRNHW Trigger: CCAGTGGTTTCTATGTAGCTTTTCTAGTTCCTTGCTATCTTCTCACCACTGGCTTGAGGTAGTGATTTGGACTTTGCTCATTAGAGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR TCA 90 bp | TATAACCCCTATACAACCTGCCTTCGTTGTATCCTTTGCCCATTATaGGGACCAAGAGGTACTGGGAAGATAAAGAGAACTGAAAATTTC | + |
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Preference number: 1 (lower is better) Translates to: YNPYTTCLRCILCPL*GPRGTGKIKRTENF Trigger: GAAATTTTCAGTTCTCTTTATCTTCCCAGTACCTCTTGGTCCTCATAATGGGCAAAGGATACAACGAAGGCAGGTTGTATAGGGGTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR TCA 90 bp | GTAGCTCACGGAAGTGGTAGAGTCTGGGTATTTCTCCTATCTTTCTaGATCTACTTCCCAACATGTGAAGTTAAATTAAGAAGCATGAAA | + |
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Preference number: 1 (lower is better) Translates to: VAHGSGRVWVFLLSF*IYFPTCEVKLRSMK Trigger: TTTCATGCTTCTTAATTTAACTTCACATGTTGGGAAGTAGATTCAGAAAGATAGGAGAAATACCCAGACTCTACCACTTCCGTGAGCTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR TCA 90 bp | GTATCAAAAACAGGATATTTAAATCCAGCCACATGTACAGAACTATaGATCTTTGTTCTTCTCAGAGCTGAACACAATGACTCCACGAGA | + |
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Preference number: 1 (lower is better) Translates to: VSKTGYLNPATCTEL*IFVLLRAEHNDSTR Trigger: TCTCGTGGAGTCATTGTGTTCAGCTCTGAGAAGAACAAAGATTCATAGTTCTGTACATGTGGCTGGATTTAAATATCCTGTTTTTGATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR GCA 90 bp | TCTAAAACGTCATTCTTCCAGGCAGCAAGCTCCAACTGCTCTGTGCCTCCTTCCCCACAACTCCTCTTCTaGCCAGACCAGTCCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SKTSFFQAASSNCSVPPSPQLLF*PDQSCR Trigger: CCTGCAGGACTGGTCTGGGCAGAAGAGGAGTTGTGG...GGAAGGAGGCACAGAGCAGTTGGAGCTTGCTGCCTGGAAGAATGACGTTTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446896.7 |
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| 3UTR CAA 90 bp | GCTATGGGGAAGCTGACCTTGAAAGCAATGAGGTCCAGATTACATTaGGAGAGTGGGAGAGGTCAAAGTTACGAGGAGAAACTTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: AMGKLTLKAMRSRLH*ESGRGQSYEEKLVS Trigger: AGAGACAAGTTTCTCCTCGTAACTTTGACCTCTCCCACTCTCCAAATGTAATCTGGACCTCATTGCTTTCAAGGTCAGCTTCCCCATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR TCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGATCCTTTGCCCATTATaGGGACCAAGAGGTACTGGG | + |
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Preference number: 2 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVILCPL*GPRGTG Trigger: CCCAGTACCTCTTGGTCCTCATAATGGGCAAAGGAT...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR CAA 90 bp | TTCTCACTCTTTGATCCATTTGTCTCTCTGCAGAATTTTGCCTGTTaGGCTCTTCTTGACCCTACTGAGTACCTTGCTCAAACTCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: FSLFDPFVSLQNFAC*ALLDPTEYLAQTPN Trigger: GTTGGGAGTTTGAGCAAGGTACTCAGTAGGGTCAAGAAGAGCCAAACAGGCAAAATTCTGCAGAGAGACAAATGGATCAAAGAGTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| 3UTR-3UTR GCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGAACCCCTATACAACCTaGCTTCGTTGTATCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVNPYTT*LRCILC Trigger: GCAAAGGATACAACGAAGGCAGGTTGTATAGGGGTT...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR TCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGGATATCGTGTTAAACTaGTGTGGCAGTAATCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVDIVLN*CGSNPR Trigger: CCTTGGATTACTGCCACATCAGTTTAACACGATATC...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR TCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGGACAAGGGAATGTGCTaGTATCGTGTTAAACTGATG | + |
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Preference number: 2 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVDKGMC*YRVKLM Trigger: CATCAGTTTAACACGATATCAGCACATTCCCTTGTC...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR GCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTGGGACTTCATGCCTTTaGTCAAGCTCTGTGCATTTC | + |
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Preference number: 2 (lower is better) Translates to: SLEITDDVVLSPVYKAEPGTSCL*SSSVHF Trigger: GAAATGCACAGAGCTTGAGCAAAGGCATGAAGTCCC...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR CAA 90 bp | AGCAATCCAGCTTTTCTTAGGTCACATTCTCACTCTTTGATCCATTaGTCTCTCTGCAGAATTTTGCCTGTTTGGCTCTTCTTGACCCTA | + |
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Preference number: 2 (lower is better) Translates to: SNPAFLRSHSHSLIH*SLCRILPVWLFLTL Trigger: TAGGGTCAAGAAGAGCCAAACAGGCAAAATTCTGCAGAGAGACAAATGGATCAAAGAGTGAGAATGTGACCTAAGAAAAGCTGGATTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| 3UTR CAA 90 bp | GATTACATTTGGAGAGTGGGAGAGGTCAAAGTTACGAGGAGAAACTaGTCTCTACCCAGCCTTGAAAAAGTGATTGATGACAACATACAA | + |
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Preference number: 2 (lower is better) Translates to: DYIWRVGEVKVTRRN*SLPSLEKVIDDNIQ Trigger: TTGTATGTTGTCATCAATCACTTTTTCAAGGCTGGGTAGAGACAAGTTTCTCCTCGTAACTTTGACCTCTCCCACTCTCCAAATGTAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTTCCAATGTTAAATACTaGTATCCCATGCCTGACCTG | + |
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Preference number: 2 (lower is better) Translates to: SLEITDDVVLSPVYKAEPSNVKY*YPMPDL Trigger: CAGGTCAGGCATGGGATATCAGTATTTAACATTGGA...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTTGTCACATAAGAAAATaGATCCCCTATCCACTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SLEITDDVVLSPVYKAEPCHIRK*IPYPLP Trigger: GGGAAGTGGATAGGGGATTCATTTTCTTATGTGACA...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTTCTCTGGGTCTCAAATaGCCTACTAGGCACTTTTTA | + |
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Preference number: 2 (lower is better) Translates to: SLEITDDVVLSPVYKAEPSLGLK*PTRHFL Trigger: TAAAAAGTGCCTAGTAGGTCATTTGAGACCCAGAGA...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR GCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGGCATATGGTTACTTTTaGCCAGATATCAAAAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVAYGYF*PDIKRS Trigger: ACTTCTTTTGATATCTGGGCAAAAGTAACCATATGC...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR GCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTACAAGAAATGTAAAGTaGCTATACAAGAGGGAACAA | + |
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Preference number: 2 (lower is better) Translates to: SLEITDDVVLSPVYKAEPTRNVK*LYKREQ Trigger: TTGTTCCCTCTTGTATAGGCACTTTACATTTCTTGT...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR CAA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGTACAACCTGCCTTCGTaGTATCCTTTGCCCATTATG | + |
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Preference number: 3 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVYNLPS*YPLPIM Trigger: CATAATGGGCAAAGGATACAACGAAGGCAGGTTGTA...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR TCA 72 bp | GCAGTTGAGAGAAGACTGGAGTTTGGAGATAACCGATaGTGTGGTATTATCTCCTGTATACAAAGCAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: AVERRLEFGDNR*CGIISCIQSRA Trigger: GGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACTCCAGTCTTCTCTCAACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR TCA 72 bp | CGAGGAGAAACTTGTCTCTACCCAGCCTTGAAAAAGTaGTTGATGACAACATACAACTGGGCAGTTGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: RGETCLYPALKK*LMTTYNWAVER Trigger: TCTCTCAACTGCCCAGTTGTATGTTGTCATCAATCACTTTTTCAAGGCTGGGTAGAGACAAGTTTCTCCTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR CAA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTCCTTCGTTGTATCCTTaGCCCATTATGAGGACCAAG | + |
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Preference number: 3 (lower is better) Translates to: SLEITDDVVLSPVYKAEPPSLYP*PIMRTK Trigger: CTTGGTCCTCATAATGGGCAAAGGATACAACGAAGG...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR CAA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTAGGGACTTCATGCCTTaGCTCAAGCTCTGTGCATTT | + |
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Preference number: 3 (lower is better) Translates to: SLEITDDVVLSPVYKAEPRDFMP*LKLCAF Trigger: AAATGCACAGAGCTTGAGCAAAGGCATGAAGTCCCT...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR TCA 72 bp | TATACAACCTGCCTTCGTTGTATCCTTTGCCCATTATaGGGACCAAGAGGTACTGGGAAGATAAAGAGAACT | + |
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Preference number: 3 (lower is better) Translates to: YTTCLRCILCPL*GPRGTGKIKRT Trigger: AGTTCTCTTTATCTTCCCAGTACCTCTTGGTCCTCATAATGGGCAAAGGATACAACGAAGGCAGGTTGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR TCA 72 bp | ATGAGCAAAGTCCAAATCACTACCTCAAGCCAGTGGTaGGAAGATAGCAAGGAACTAGAAAAGCTACATAGA | + |
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Preference number: 3 (lower is better) Translates to: MSKVQITTSSQW*EDSKELEKLHR Trigger: TCTATGTAGCTTTTCTAGTTCCTTGCTATCTTCTCACCACTGGCTTGAGGTAGTGATTTGGACTTTGCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR CAA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGAGCATATGGTTACTTTaGCCCAGATATCAAAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVSIWLL*PRYQKK Trigger: CTTCTTTTGATATCTGGGCAAAAGTAACCATATGCT...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR-3UTR CAA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTCAGAACTATGAATCTTaGTTCTTCTCAGAGCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: SLEITDDVVLSPVYKAEPQNYES*FFSELN Trigger: GTTCAGCTCTGAGAAGAACAAAGATTCATAGTTCTG...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR GCA 90 bp | CTTGTCTCTAAAACGTCATTCTTCCAGGCAGCAAGCTCCAACTGCTCTGTGCCTGCAGCAAGCTCCAACTaGTCTGTGCCTCCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LVSKTSFFQAASSNCSVPAASSN*SVPPSS Trigger: AGAGGAAGGAGGCACAGAGCAGTTGGAGCTTGCTGC...AGGCACAGAGCAGTTGGAGCTTGCTGCCTGGAAGAATGACGTTTTAGAGACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446896.7 |
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| CDS-3UTR CCA 90 bp | CATTTGTCTCTCTGCAGAATTTTGCCTGTTTGGCTCTTCTTGACCCTACTGAGTGATAACTTTGTGCTCTaGCTCGCGGACATCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: HLSLCRILPVWLFLTLLSDNFVL*LADIAA Trigger: GGCGGCGATGTCCGCGAGCCAGAGCACAAAGTTATC...ACTCAGTAGGGTCAAGAAGAGCCAAACAGGCAAAATTCTGCAGAGAGACAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| CDS-3UTR TCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGAGAGCAAAGGATACCTaGGCTATGGGGAAGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVRAKDT*AMGKLT Trigger: GGTCAGCTTCCCCATAGCTCAGGTATCCTTTGCTCT...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR GCA 90 bp | CTTGTCTCTAAAACGTCATTCTTCCAGGCAGCAAGCTCCAACTGCTCTGTGCCTTGCCCAGACCAGTCCTaGAGGAATGTTTTTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LVSKTSFFQAASSNCSVPCPDQS*RNVFLL Trigger: AAGAAGAAAAACATTCCTGCAGGACTGGTCTGGGCA...AGGCACAGAGCAGTTGGAGCTTGCTGCCTGGAAGAATGACGTTTTAGAGACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446896.7 |
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| CDS-3UTR GCA 90 bp | TCTTCTTATCCCCCAATCATCTTGATCTCTGAACTGAGAGCTTCATCCCATTTACCACAACTCCTCTTCTaGCCAGACCAGTCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSYPPIILISELRASSHLPQLLF*PDQSCR Trigger: CCTGCAGGACTGGTCTGGGCAGAAGAGGAGTTGTGG...TAAATGGGATGAAGCTCTCAGTTCAGAGATCAAGATGATTGGGGGATAAGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446896.7 |
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| CDS-3UTR CCA 90 bp | TCTTCTTATCCCCCAATCATCTTGATCTCTGAACTGAGAGCTTCATCCCATTTAGATAACTTTGTGCTCTaGCTCGCGGACATCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SSYPPIILISELRASSHLDNFVL*LADIAA Trigger: GGCGGCGATGTCCGCGAGCCAGAGCACAAAGTTATC...TAAATGGGATGAAGCTCTCAGTTCAGAGATCAAGATGATTGGGGGATAAGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446896.7 |
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| CDS-3UTR GCA 90 bp | TTCCTCTCTTTCTCCTCATATCTAGTTACCACAACTCCTCTTCTGCCCAGACCAACAATGATAACTTTGTaGTCTGGCTCGCGGACATCG | + |
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Preference number: 4 (lower is better) Translates to: FLSFSSYLVTTTPLLPRPTMITL*SGSRTS Trigger: CGATGTCCGCGAGCCAGAGCACAAAGTTATCATTGT...TGGTCTGGGCAGAAGAGGAGTTGTGGTAACTAGATATGAGGAGAAAGAGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446896.7 |
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| CDS-3UTR GCA 90 bp | CCATTTGTCTCTCTGCAGAATTTTGCCTGTTTGGCTCTTCTTGACCCTACTGAGACAATGATAACTTTGTaGTCTGGCTCGCGGACATCG | + |
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Preference number: 4 (lower is better) Translates to: PFVSLQNFACLALLDPTETMITL*SGSRTS Trigger: CGATGTCCGCGAGCCAGAGCACAAAGTTATCATTGT...CTCAGTAGGGTCAAGAAGAGCCAAACAGGCAAAATTCTGCAGAGAGACAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| CDS-3UTR TCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGATACAACTGGGCAGTTaGGAGAAGACTGGAGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVIQLGS*EKTGVW Trigger: CCAAACTCCAGTCTTCTCTCAACTGCCCAGTTGTAT...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR TCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGACCTCAAGCCAGTGGTaGGAAGATAGCAAGGAACTA | + |
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Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVTSSQW*EDSKEL Trigger: TAGTTCCTTGCTATCTTCTCACCACTGGCTTGAGGT...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR GCA 90 bp | TCTTCTTATCCCCCAATCATCTTGATCTCTGAACTGAGAGCTTCATCCCATTTAGCTCCAACTGCTCTGTaGCTCCTTCCTCTCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SSYPPIILISELRASSHLAPTAL*LLPLFL Trigger: GAGAAAGAGAGGAAGGAGGCACAGAGCAGTTGGAGC...TAAATGGGATGAAGCTCTCAGTTCAGAGATCAAGATGATTGGGGGATAAGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446896.7 |
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| CDS-3UTR CCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGGGTCCAGATTACATTTaGAGAGTGGGAGAGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVGPDYI*RVGEVK Trigger: TTTGACCTCTCCCACTCTCCAAATGTAATCTGGACC...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR CAA 72 bp | TTGCCTGTTTGGCTCTTCTTGACCCTACTGAGTACCTaGCTCAAACTCCCAACTTCATCTGTAATTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LPVWLFLTLLST*LKLPTSSVIPF Trigger: GAAAGGAATTACAGATGAAGTTGGGAGTTTGAGCAAGGTACTCAGTAGGGTCAAGAAGAGCCAAACAGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| 3UTR CAA 72 bp | TCTCACTCTTTGATCCATTTGTCTCTCTGCAGAATTTaGCCTGTTTGGCTCTTCTTGACCCTACTGAGTACC | + |
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Preference number: 4 (lower is better) Translates to: SHSLIHLSLCRI*PVWLFLTLLST Trigger: GGTACTCAGTAGGGTCAAGAAGAGCCAAACAGGCAAAATTCTGCAGAGAGACAAATGGATCAAAGAGTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| CDS-3UTR TCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGTCCAATGTTAAATACTaGTATCCCATGCCTGACCTG | + |
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Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVSNVKY*YPMPDL Trigger: CAGGTCAGGCATGGGATATCAGTATTTAACATTGGA...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR TCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGTGTCACATAAGAAAATaGATCCCCTATCCACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVCHIRK*IPYPLP Trigger: GGGAAGTGGATAGGGGATTCATTTTCTTATGTGACA...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR TCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGTCTCTGGGTCTCAAATaGCCTACTAGGCACTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVSLGLK*PTRHFL Trigger: TAAAAAGTGCCTAGTAGGTCATTTGAGACCCAGAGA...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR TCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGCTATCGCACATTCTTTaGGGGAGCATGATATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVLSHIL*GSMIYK Trigger: CTTGTATATCATGCTCCCTCAAAGAATGTGCGATAG...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTATACACACTGCAAGCTaGTCTTCTGATGGACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLEITDDVVLSPVYKAEPIHTAS*SSDGLH Trigger: GTGGAGTCCATCAGAAGACCAGCTTGCAGTGTGTAT...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR TCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGCATTTCTTCACAATCTaGCAGGACTTTAGGGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVHFFTI*QDFRVN Trigger: GTTAACCCTAAAGTCCTGTCAGATTGTGAAGAAATG...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| 3UTR CAA 72 bp | GCTTTTCTTAGGTCACATTCTCACTCTTTGATCCATTaGTCTCTCTGCAGAATTTTGCCTGTTTGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AFLRSHSHSLIH*SLCRILPVWLF Trigger: GAAGAGCCAAACAGGCAAAATTCTGCAGAGAGACAAATGGATCAAAGAGTGAGAATGTGACCTAAGAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| CDS-3UTR TCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTGACAAGGGAATGTGCTaGTATCGTGTTAAACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLEITDDVVLSPVYKAEPDKGMC*YRVKLM Trigger: CATCAGTTTAACACGATATCAGCACATTCCCTTGTC...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR TCA 90 bp | TCTTCTTATCCCCCAATCATCTTGATCTCTGAACTGAGAGCTTCATCCCATTTAAATCATCTTGATCTCTaGACTGAGAGCTTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSYPPIILISELRASSHLNHLDL*TESFIP Trigger: TGGGATGAAGCTCTCAGTTCAGAGATCAAGATGATT...TAAATGGGATGAAGCTCTCAGTTCAGAGATCAAGATGATTGGGGGATAAGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446896.7 |
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| CDS-3UTR GCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTTTTGCTCAAGCTCTGTaGATTTCTCTGGGTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLEITDDVVLSPVYKAEPFAQAL*ISLGLK Trigger: TTTGAGACCCAGAGAAATGCACAGAGCTTGAGCAAA...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR GCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGTGTACTGTATGTGGTTaGTGTAGTGACAAGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVCTVCG*CSDKKC Trigger: ACATTTCTTGTCACTACAGCAACCACATACAGTACA...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR GCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGGTACATTCCCAAAAATaGCTCCAGAGAAAACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVVHSQK*LQRKLE Trigger: TTCTAGTTTTCTCTGGAGGCATTTTTGGGAATGTAC...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR GCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGATATTGGCATCTATATaGTATACACACTGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVILASI*YTHCKL Trigger: CAGCTTGCAGTGTGTATAGCATATAGATGCCAATAT...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTCAGTTGAGAGAAGACTaGAGTTTGGAGATAACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLEITDDVVLSPVYKAEPQLRED*SLEITD Trigger: ATCGGTTATCTCCAAACTCCAGTCTTCTCTCAACTG...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTATGACAACATACAACTaGGCAGTTGAGAGAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLEITDDVVLSPVYKAEPMTTYN*AVERRL Trigger: CAGTCTTCTCTCAACTGCCCAGTTGTATGTTGTCAT...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTGGAAGTGGTAGAGTCTaGGTATTTCTCCTATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLEITDDVVLSPVYKAEPGSGRV*VFLLSF Trigger: GAAAGATAGGAGAAATACCCAGACTCTACCACTTCC...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR TCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTTTTGGAGATAACCGATaGTGTGGTATTATCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLEITDDVVLSPVYKAEPFGDNR*CGIISC Trigger: ACAGGAGATAATACCACATCATCGGTTATCTCCAAA...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR TCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTCCAGCCTTGAAAAAGTaGTTGATGACAACATACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLEITDDVVLSPVYKAEPPALKK*LMTTYN Trigger: GTTGTATGTTGTCATCAATCACTTTTTCAAGGCTGG...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR GCA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGACAAGAAATGTAAAGTaGCTATACAAGAGGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVTRNVK*LYKREQ Trigger: TTGTTCCCTCTTGTATAGGCACTTTACATTTCTTGT...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR GCA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTGCATATGGTTACTTTTaGCCAGATATCAAAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLEITDDVVLSPVYKAEPAYGYF*PDIKRS Trigger: ACTTCTTTTGATATCTGGGCAAAAGTAACCATATGC...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS TCA 90 bp | ACTTCTATGTGGTGTCCAAACACAACTGGTGAGCAAAGAAAGGGCTaGAAGACAGGCCAGGCCGTGCTACTCAGGGACGTCGGACCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSMWCPNTTGEQRKG*KTGQAVLLRDVGPW Trigger: CCAGGGTCCGACGTCCCTGAGTAGCACGGCCTGGCCTGTCTTTCAGCCCTTTCTTTGCTCACCAGTTGTGTTTGGACACCACATAGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487723.1 |
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| CDS GCA 90 bp | AGGTGTAATGGACAAGTCGAGCGATTCCTCCCGTTTTCCGCATTCTaGAACCCTCGGTCGCTCAGTGGTGCGGTTAGGGCAGCAATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: RCNGQVERFLPFSAF*NPRSLSGAVRAAIY Trigger: ATAGATTGCTGCCCTAACCGCACCACTGAGCGACCGAGGGTTGCAGAATGCGGAAAACGGGAGGAATCGCTCGACTTGTCCATTACACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487723.1 |
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| CDS-3UTR CAA 90 bp | TCTAAAACGTCATTCTTCCAGGCAGCAAGCTCCAACTGCTCTGTGCCTCCTTCCCCAACAATGATAACTTaGTGCTCTGGCTCGCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SKTSFFQAASSNCSVPPSPTMIT*CSGSRT Trigger: TGTCCGCGAGCCAGAGCACAAAGTTATCATTGTTGG...GGAAGGAGGCACAGAGCAGTTGGAGCTTGCTGCCTGGAAGAATGACGTTTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446896.7 |
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| CDS-3UTR CAA 90 bp | ACCACAACTCCTCTTCTGCCCAGACCAGTCCTGCAGGAATGTTTTTCTTCTTCTACTTGTACTGAGGAGTaGAAGTCCAGCCTGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TTTPLLPRPVLQECFSSSTCTEE*KSSLGN Trigger: GTTGCCCAGGCTGGACTTCAACTCCTCAGTACAAGT...AGAAGAAGAAAAACATTCCTGCAGGACTGGTCTGGGCAGAAGAGGAGTTGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446896.7 |
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| CDS-3UTR CAA 90 bp | CTTGTCTCTAAAACGTCATTCTTCCAGGCAGCAAGCTCCAACTGCTCTGTGCCTTATCCCCCAATCATCTaGATCTCTGAACTGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LVSKTSFFQAASSNCSVPYPPII*ISELRA Trigger: AGCTCTCAGTTCAGAGATCAAGATGATTGGGGGATA...AGGCACAGAGCAGTTGGAGCTTGCTGCCTGGAAGAATGACGTTTTAGAGACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446896.7 |
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| CDS-3UTR CAA 90 bp | TCTCTCTGCAGAATTTTGCCTGTTTGGCTCTTCTTGACCCTACTGAGTACCTTGCCTGTTTGGCTCTTCTaGACCCTACTGAGTACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLCRILPVWLFLTLLSTLPVWLF*TLLSTL Trigger: CAAGGTACTCAGTAGGGTCAAGAAGAGCCAAACAGG...CAAGGTACTCAGTAGGGTCAAGAAGAGCCAAACAGGCAAAATTCTGCAGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| CDS-3UTR CAA 90 bp | CTTGTCTCTAAAACGTCATTCTTCCAGGCAGCAAGCTCCAACTGCTCTGTGCCTCAACACAGTCAGACCTaGTCTCTAAAACGTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVSKTSFFQAASSNCSVPQHSQT*SLKRHS Trigger: AGAATGACGTTTTAGAGACAAGGTCTGACTGTGTTG...AGGCACAGAGCAGTTGGAGCTTGCTGCCTGGAAGAATGACGTTTTAGAGACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446896.7 |
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| CDS-3UTR CAA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGCCTTCGTTGTATCCTTaGCCCATTATGAGGACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVPSLYP*PIMRTK Trigger: CTTGGTCCTCATAATGGGCAAAGGATACAACGAAGG...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CAA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGAGGGACTTCATGCCTTaGCTCAAGCTCTGTGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVRDFMP*LKLCAF Trigger: AAATGCACAGAGCTTGAGCAAAGGCATGAAGTCCCT...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CAA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGCATACAACTGGGCAGTaGAGAGAAGACTGGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVHTTGQ*REDWSL Trigger: CAAACTCCAGTCTTCTCTCAACTGCCCAGTTGTATG...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CAA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGGTTACGAGGAGAAACTaGTCTCTACCCAGCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVVTRRN*SLPSLE Trigger: TTCAAGGCTGGGTAGAGACAAGTTTCTCCTCGTAAC...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CAA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGAGGTCCAGATTACATTaGGAGAGTGGGAGAGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVRSRLH*ESGRGQ Trigger: TTGACCTCTCCCACTCTCCAAATGTAATCTGGACCT...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CAA 90 bp | CATTTGTCTCTCTGCAGAATTTTGCCTGTTTGGCTCTTCTTGACCCTACTGAGTACCCTACTGAGTACCTaGCTCAAACTCCCAACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLSLCRILPVWLFLTLLSTLLST*LKLPTS Trigger: TGAAGTTGGGAGTTTGAGCAAGGTACTCAGTAGGGT...ACTCAGTAGGGTCAAGAAGAGCCAAACAGGCAAAATTCTGCAGAGAGACAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| CDS-3UTR CAA 90 bp | TCTCTCTGCAGAATTTTGCCTGTTTGGCTCTTCTTGACCCTACTGAGTACCTTGCAGAATTTTGCCTGTTaGGCTCTTCTTGACCCTACT | + |
|
Preference number: 5 (lower is better) Translates to: SLCRILPVWLFLTLLSTLQNFAC*ALLDPT Trigger: AGTAGGGTCAAGAAGAGCCAAACAGGCAAAATTCTG...CAAGGTACTCAGTAGGGTCAAGAAGAGCCAAACAGGCAAAATTCTGCAGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| CDS-3UTR CAA 90 bp | ATTTTGCCTGTTTGGCTCTTCTTGACCCTACTGAGTACCTTGCTCAAACTCCCATCTCTCTGCAGAATTTaGCCTGTTTGGCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILPVWLFLTLLSTLLKLPSLCRI*PVWLFL Trigger: CAAGAAGAGCCAAACAGGCAAAATTCTGCAGAGAGA...TGGGAGTTTGAGCAAGGTACTCAGTAGGGTCAAGAAGAGCCAAACAGGCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| CDS-3UTR CAA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTATGGGGAAGCTGACCTaGAAAGCAATGAGGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLEITDDVVLSPVYKAEPMGKLT*KAMRSR Trigger: TCTGGACCTCATTGCTTTCAAGGTCAGCTTCCCCAT...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CAA 90 bp | TTCTCACTCTTTGATCCATTTGTCTCTCTGCAGAATTTTGCCTGTTTGGCTCTTCCAACAATGATAACTTaGTGCTCTGGCTCGCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: FSLFDPFVSLQNFACLALPTMIT*CSGSRT Trigger: TGTCCGCGAGCCAGAGCACAAAGTTATCATTGTTGG...AAGAGCCAAACAGGCAAAATTCTGCAGAGAGACAAATGGATCAAAGAGTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| CDS-3UTR CAA 90 bp | TTGTCTCTCTGCAGAATTTTGCCTGTTTGGCTCTTCTTGACCCTACTGAGTACCCACTCTTTGATCCATTaGTCTCTCTGCAGAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSLCRILPVWLFLTLLSTHSLIH*SLCRIL Trigger: CAAAATTCTGCAGAGAGACAAATGGATCAAAGAGTG...GGTACTCAGTAGGGTCAAGAAGAGCCAAACAGGCAAAATTCTGCAGAGAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458140.6 |
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| CDS-3UTR CAA 90 bp | GAGACAAAAAGGAAAACAATGTCAGGGACTTCATGCCTTTGCTCAAGCTCTGTGCAGAACTATGAATCTTaGTTCTTCTCAGAGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ETKRKTMSGTSCLCSSSVQNYES*FFSELN Trigger: GTTCAGCTCTGAGAAGAACAAAGATTCATAGTTCTG...CACAGAGCTTGAGCAAAGGCATGAAGTCCCTGACATTGTTTTCCTTTTTGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CAA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTTACAACCTGCCTTCGTaGTATCCTTTGCCCATTATG | + |
|
Preference number: 5 (lower is better) Translates to: SLEITDDVVLSPVYKAEPYNLPS*YPLPIM Trigger: CATAATGGGCAAAGGATACAACGAAGGCAGGTTGTA...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CAA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTAGAGAAGACTGGAGTTaGGAGATAACCGATGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLEITDDVVLSPVYKAEPREDWS*EITDDV Trigger: CACATCATCGGTTATCTCCAAACTCCAGTCTTCTCT...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CAA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTTCTATCGCACATTCTTaGAGGGAGCATGATATACAA | + |
|
Preference number: 5 (lower is better) Translates to: SLEITDDVVLSPVYKAEPSIAHS*REHDIQ Trigger: TTGTATATCATGCTCCCTCAAAGAATGTGCGATAGA...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295087.13 |
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| CDS-3UTR CAA 90 bp | AGTTTGGAGATAACCGATGATGTGGTATTATCTCCTGTATACAAAGCAGAGCCTAGCATATGGTTACTTTaGCCCAGATATCAAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLEITDDVVLSPVYKAEPSIWLL*PRYQKK Trigger: CTTCTTTTGATATCTGGGCAAAAGTAACCATATGCT...AGGCTCTGCTTTGTATACAGGAGATAATACCACATCATCGGTTATCTCCAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295087.13 |
||
| CDS GCA 72 bp | GGACAAGTCGAGCGATTCCTCCCGTTTTCCGCATTCTaGAACCCTCGGTCGCTCAGTGGTGCGGTTAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GQVERFLPFSAF*NPRSLSGAVRA Trigger: TGCCCTAACCGCACCACTGAGCGACCGAGGGTTGCAGAATGCGGAAAACGGGAGGAATCGCTCGACTTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487723.1 |
||
| CDS TCA 72 bp | TGGTGTCCAAACACAACTGGTGAGCAAAGAAAGGGCTaGAAGACAGGCCAGGCCGTGCTACTCAGGGACGTC | + |
|
Preference number: 6 (lower is better) Translates to: WCPNTTGEQRKG*KTGQAVLLRDV Trigger: GACGTCCCTGAGTAGCACGGCCTGGCCTGTCTTTCAGCCCTTTCTTTGCTCACCAGTTGTGTTTGGACACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487723.1 |
||
| CDS CCA 72 bp | ATAACCTTCATTCCAGAAGACCCCAGCACTTCTATGTaGTGTCCAAACACAACTGGTGAGCAAAGAAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ITFIPEDPSTSM*CPNTTGEQRKG Trigger: GCCCTTTCTTTGCTCACCAGTTGTGTTTGGACACCACATAGAAGTGCTGGGGTCTTCTGGAATGAAGGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487723.1 |
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