Pregenerated sensors for ARL4D (Homo sapiens)
Ensembl gene IDs: ENSG00000175906Ensembl transcript IDs: ENST00000320033.5
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTCTCCTTCATTGAGGTGGACAGGTCCTGCACCCCAGTCTGACTaGGAGGTCACAGGCTGGTCCCACCCTGCTGTCCAAGTGTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: LSPSLRWTGPAPQSD*EVTGWSHPAVQVCR Trigger: TCTGCACACTTGGACAGCAGGGTGGGACCAGCCTGTGACCTCTCAGTCAGACTGGGGTGCAGGACCTGTCCACCTCAATGAAGGAGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| 3UTR TCA 90 bp | ATTTACGTCTCCACAGTCCTGCAGCGCCCACTTCTCCAGAGAGGATaGGAGAGATATGCAAAGACATCCCATCTCCCATCCCCACCCCAG | + |
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Preference number: 1 (lower is better) Translates to: IYVSTVLQRPLLQRG*ERYAKTSHLPSPPQ Trigger: CTGGGGTGGGGATGGGAGATGGGATGTCTTTGCATATCTCTCTCATCCTCTCTGGAGAAGTGGGCGCTGCAGGACTGTGGAGACGTAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| 3UTR GCA 90 bp | AAGCCATCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTaGAAATTCAGCTTCAAGATAAATCTCCCTCCCCCTGCGCCACAA | + |
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Preference number: 1 (lower is better) Translates to: KPSRNTQSNFYKCLL*KFSFKINLPPPAPQ Trigger: TTGTGGCGCAGGGGGAGGGAGATTTATCTTGAAGCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGATGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| 3UTR-3UTR GCA 90 bp | CACCAAAACGGGACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACAGGTCCAGGCTGGTCCCACCCTaGTGTCCAAGTGTGCAGACC | + |
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Preference number: 2 (lower is better) Translates to: HQNGTPHAPLSFIEVDRSRLVPP*CPSVQT Trigger: GGTCTGCACACTTGGACAGCAGGGTGGGACCAGCCT...GGACCTGTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGTCCCGTTTTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| 3UTR-3UTR CCA 90 bp | AATGCCCCAGACCAAGGTAAGAGCTACAGTTATCAGTCTTTAATAACTTACAGGTCTCCTTCATTGAGGTaGACAGGTCCTGCACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: NAPDQGKSYSYQSLITYRSPSLR*TGPAPQ Trigger: CTGGGGTGCAGGACCTGTCCACCTCAATGAAGGAGA...CCTGTAAGTTATTAAAGACTGATAACTGTAGCTCTTACCTTGGTCTGGGGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGACCAAGGTAAGAGCTACAGTTATCAGTCTTTAATAACTTACAGGCAAATGATGGATCTACAAATGTaGGGAGGGGTTCTTGGCACT | + |
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Preference number: 2 (lower is better) Translates to: PDQGKSYSYQSLITYRQMMDLQM*GGVLGT Trigger: AGTGCCAAGAACCCCTCCCCACATTTGTAGATCCAT...CATTTGCCTGTAAGTTATTAAAGACTGATAACTGTAGCTCTTACCTTGGTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| 3UTR TCA 72 bp | TCATTGAGGTGGACAGGTCCTGCACCCCAGTCTGACTaGGAGGTCACAGGCTGGTCCCACCCTGCTGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: SLRWTGPAPQSD*EVTGWSHPAVQ Trigger: TTGGACAGCAGGGTGGGACCAGCCTGTGACCTCTCAGTCAGACTGGGGTGCAGGACCTGTCCACCTCAATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| 3UTR TCA 72 bp | TCCACAGTCCTGCAGCGCCCACTTCTCCAGAGAGGATaGGAGAGATATGCAAAGACATCCCATCTCCCATCC | + |
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Preference number: 3 (lower is better) Translates to: STVLQRPLLQRG*ERYAKTSHLPS Trigger: GGATGGGAGATGGGATGTCTTTGCATATCTCTCTCATCCTCTCTGGAGAAGTGGGCGCTGCAGGACTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| 3UTR-3UTR CAA 90 bp | CCATCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCCTCCTCTCTCCTTCATaGAGGTGGACAGGTCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: PSRNTQSNFYKCLLCKFSLLSPS*RWTGPA Trigger: TGCAGGACCTGTCCACCTCAATGAAGGAGAGAGGAG...GCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| 3UTR CCA 72 bp | ACACAGCTTATAAAAAGGGTCATGGATCTACAAATGTaGGGAGGGGTTCTTGGCACTTTCACAGACACAAAA | + |
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Preference number: 3 (lower is better) Translates to: TQLIKRVMDLQM*GGVLGTFTDTK Trigger: TTTTGTGTCTGTGAAAGTGCCAAGAACCCCTCCCCACATTTGTAGATCCATGACCCTTTTTATAAGCTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| 3UTR-3UTR CAA 90 bp | CATCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCTTGTGGGGAGGGGTTCTaGGCACTTTCACAGACACAA | + |
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Preference number: 3 (lower is better) Translates to: HPVTHNLIFISACFANSACGEGF*ALSQTQ Trigger: TTGTGTCTGTGAAAGTGCCAAGAACCCCTCCCCACA...AGCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR GCA 90 bp | GGTGGACAGGTCCTGCACCCCAGTCTGACTGAGAGGTCACAGGCTGGTCCCACCAGGCGCTCAAGGCCCTaGTGCAGGCCCAGACCGTCC | + |
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Preference number: 4 (lower is better) Translates to: GGQVLHPSLTERSQAGPTRRSRP*CRPRPS Trigger: GGACGGTCTGGGCCTGCAGCAGGGCCTTGAGCGCCT...GGTGGGACCAGCCTGTGACCTCTCAGTCAGACTGGGGTGCAGGACCTGTCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR TCA 90 bp | CAGGTCCTGCACCCCAGTCTGACTGAGAGGTCACAGGCTGGTCCCACCCTGCTGTGTCCGAGGCCCGGCTaGTTCGGTGCAACTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: QVLHPSLTERSQAGPTLLCPRPG*FGATPP Trigger: AGGTGGAGTTGCACCGAATCAGCCGGGCCTCGGACA...CAGCAGGGTGGGACCAGCCTGTGACCTCTCAGTCAGACTGGGGTGCAGGACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR GCA 90 bp | GGTGGACAGGTCCTGCACCCCAGTCTGACTGAGAGGTCACAGGCTGGTCCCACCAGGCTGGTCCCACCCTaGTGTCCAAGTGTGCAGACC | + |
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Preference number: 4 (lower is better) Translates to: GGQVLHPSLTERSQAGPTRLVPP*CPSVQT Trigger: GGTCTGCACACTTGGACAGCAGGGTGGGACCAGCCT...GGTGGGACCAGCCTGTGACCTCTCAGTCAGACTGGGGTGCAGGACCTGTCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR TCA 90 bp | GGTGGACAGGTCCTGCACCCCAGTCTGACTGAGAGGTCACAGGCTGGTCCCACCCAGAGTCCAGCCCAATaGCCACGACATGCAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GGQVLHPSLTERSQAGPTQSPAQ*PRHAGL Trigger: AAGCCCTGCATGTCGTGGTCATTGGGCTGGACTCTG...GGTGGGACCAGCCTGTGACCTCTCAGTCAGACTGGGGTGCAGGACCTGTCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | ACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACAGGTCCTGCACCCCAGTCGGCCAGCACCAGCACTaGCACGCCCTGGTTGTCCGA | + |
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Preference number: 4 (lower is better) Translates to: TPHAPLSFIEVDRSCTPVGQHQH*HALVVR Trigger: TCGGACAACCAGGGCGTGCCAGTGCTGGTGCTGGCC...GACTGGGGTGCAGGACCTGTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | ACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACAGGTCCTGCACCCCAGTCCTCAGTGCCCCGGGCTaGTCCTGCTTGTTGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TPHAPLSFIEVDRSCTPVLSAPG*SCLLAS Trigger: GCTGGCCAACAAGCAGGACCAGCCCGGGGCACTGAG...GACTGGGGTGCAGGACCTGTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | CACAGGCTGGTCCCACCCTGCTGTCCAAGTGTGCAGACCCCTACTAGGTGGGAGTCCAGGGAGCACAGCTaGGTTATCTCTCGTGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: HRLVPPCCPSVQTPTRWESREHS*VISREP Trigger: CGGCTCACGAGAGATAACCCAGCTGTGCTCCCTGGA...CTCCCACCTAGTAGGGGTCTGCACACTTGGACAGCAGGGTGGGACCAGCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR GCA 90 bp | ACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACAGGTCCTGCACCCCAGTCGTCACCGTCTCTTCTTaGCACCCCGAGCTGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TPHAPLSFIEVDRSCTPVVTVSS*HPELPS Trigger: AGAAGGCAGCTCGGGGTGGCAAGAAGAGACGGTGAC...GACTGGGGTGCAGGACCTGTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR GCA 90 bp | GTGTGGCACCAAAACGGGACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACCCTGCTGTCCAAGTGTaGAGACCCCTACTAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: VWHQNGTPHAPLSFIEVDPAVQV*RPLLGG Trigger: CCCACCTAGTAGGGGTCTGCACACTTGGACAGCAGG...GTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGTCCCGTTTTGGTGCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | GTGTGGCACCAAAACGGGACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACATAAGAGCGCCACAGTaGTCGCAGCTTCTCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VWHQNGTPHAPLSFIEVDIRAPQ*SQLLLP Trigger: GGGCAGGAGAAGCTGCGACCACTGTGGCGCTCTTAT...GTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGTCCCGTTTTGGTGCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR TCA 90 bp | TCACAGTTTACATTTACGTCTCCACAGTCCTGCAGCGCCCACTTCTCCAGAGAGCTGGGTTATCTCTCGTaGGCCGCGCTCTCCTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: SQFTFTSPQSCSAHFSRELGYLS*AALSSS Trigger: GCTCGAGGAGAGCGCGGCTCACGAGAGATAACCCAG...CTCTCTGGAGAAGTGGGCGCTGCAGGACTGTGGAGACGTAAATGTAAACTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR GCA 90 bp | TGGCACCAAAACGGGACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACAGGAAATCTCCCTCCCCCTaGGCCACAACCCCATATAGA | + |
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Preference number: 4 (lower is better) Translates to: WHQNGTPHAPLSFIEVDRKSPSP*ATTPYR Trigger: TCTATATGGGGTTGTGGCGCAGGGGGAGGGAGATTT...CCTGTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGTCCCGTTTTGGTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR TCA 90 bp | GAGGTAGAGTCACAGTTTACATTTACGTCTCCACAGTCCTGCAGCGCCCACTTCAGCCTTGCACATGAGTaGGAGTGGCGGCTGCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: EVESQFTFTSPQSCSAHFSLAHE*EWRLLA Trigger: AGCTAGCAGCCGCCACTCTCACTCATGTGCAAGGCT...GAAGTGGGCGCTGCAGGACTGTGGAGACGTAAATGTAAACTGTGACTCTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR TCA 90 bp | GTGTGGCACCAAAACGGGACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACCTGCCTTCTTCCTCTTaGGGATCATCTCATAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VWHQNGTPHAPLSFIEVDLPSSS*GSSHRG Trigger: GCCTCTATGAGATGATCCTCAAGAGGAAGAAGGCAG...GTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGTCCCGTTTTGGTGCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | TCACAGTTTACATTTACGTCTCCACAGTCCTGCAGCGCCCACTTCTCCAGAGAGCCGACGTCCCACACTTaGAAGGTGATGCCACGCGAT | + |
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Preference number: 4 (lower is better) Translates to: SQFTFTSPQSCSAHFSREPTSHT*KVMPRD Trigger: ATCGCGTGGCATCACCTTCCAAGTGTGGGACGTCGG...CTCTCTGGAGAAGTGGGCGCTGCAGGACTGTGGAGACGTAAATGTAAACTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | ACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACAGGTCCTGCACCCCAGTCATGGATCTACAAATGTaGGGAGGGGTTCTTGGCACT | + |
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Preference number: 4 (lower is better) Translates to: TPHAPLSFIEVDRSCTPVMDLQM*GGVLGT Trigger: AGTGCCAAGAACCCCTCCCCACATTTGTAGATCCAT...GACTGGGGTGCAGGACCTGTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR GCA 90 bp | GAGGTAGAGTCACAGTTTACATTTACGTCTCCACAGTCCTGCAGCGCCCACTTCCTTGCCACCCCGAGCTaGCTTCTTCCTCTTGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: EVESQFTFTSPQSCSAHFLATPS*LLPLED Trigger: ATCCTCAAGAGGAAGAAGGCAGCTCGGGGTGGCAAG...GAAGTGGGCGCTGCAGGACTGTGGAGACGTAAATGTAAACTGTGACTCTACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | TCACAGTTTACATTTACGTCTCCACAGTCCTGCAGCGCCCACTTCTCCAGAGAGTCTCCTTCATTGAGGTaGACAGGTCCTGCACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SQFTFTSPQSCSAHFSRESPSLR*TGPAPQ Trigger: CTGGGGTGCAGGACCTGTCCACCTCAATGAAGGAGA...CTCTCTGGAGAAGTGGGCGCTGCAGGACTGTGGAGACGTAAATGTAAACTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR TCA 90 bp | CCAGACCAAGGTAAGAGCTACAGTTATCAGTCTTTAATAACTTACAGGCAAATGTCGAGCCTTTCCCGGTaGAACACCGCAGCCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: PDQGKSYSYQSLITYRQMSSLSR*NTAAAP Trigger: CGGGGCGGCTGCGGTGTTTCACCGGGAAAGGCTCGA...CATTTGCCTGTAAGTTATTAAAGACTGATAACTGTAGCTCTTACCTTGGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR GCA 90 bp | CCAGACCAAGGTAAGAGCTACAGTTATCAGTCTTTAATAACTTACAGGCAAATGGCCCCGGGCTGGTCCTaGTTGTTGGCCAGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PDQGKSYSYQSLITYRQMAPGWS*LLASTS Trigger: GCTGGTGCTGGCCAACAAGCAGGACCAGCCCGGGGC...CATTTGCCTGTAAGTTATTAAAGACTGATAACTGTAGCTCTTACCTTGGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR TCA 90 bp | AATGCCCCAGACCAAGGTAAGAGCTACAGTTATCAGTCTTTAATAACTTACAGGTCCTGCACCCCAGTCTaGCTGAGAGGTCACAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NAPDQGKSYSYQSLITYRSCTPV*LRGHRL Trigger: CAGCCTGTGACCTCTCAGTCAGACTGGGGTGCAGGA...CCTGTAAGTTATTAAAGACTGATAACTGTAGCTCTTACCTTGGTCTGGGGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | TCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCTTCAGCACTGGCACGCCCTaGTTGTCCGAGGCCCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SRNTQSNFYKCLLCKFSFSTGTP*LSEARL Trigger: CAGCCGGGCCTCGGACAACCAGGGCGTGCCAGTGCT...GAAGCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR TCA 90 bp | CCATCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCCCCACACTTGGAAGGTaGTGCCACGCGATCCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: PSRNTQSNFYKCLLCKFSPTLGR*CHAIPR Trigger: TCGGGGGATCGCGTGGCATCACCTTCCAAGTGTGGG...GCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR GCA 90 bp | CCAGACCAAGGTAAGAGCTACAGTTATCAGTCTTTAATAACTTACAGGCAAATGGCCCGGCTGATTCGGTaGAACTCCACCTTGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PDQGKSYSYQSLITYRQMARLIR*NSTLAS Trigger: GGAAGCCAAGGTGGAGTTGCACCGAATCAGCCGGGC...CATTTGCCTGTAAGTTATTAAAGACTGATAACTGTAGCTCTTACCTTGGTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR GCA 90 bp | CATCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCTCGCTCAAGGCCCTGCTaGAGGCCCAGACCGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: HPVTHNLIFISACFANSARSRPC*RPRPST Trigger: TGTGGACGGTCTGGGCCTGCAGCAGGGCCTTGAGCG...AGCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | CCAGACCAAGGTAAGAGCTACAGTTATCAGTCTTTAATAACTTACAGGCAAATGGGTGCAACTCCACCTTaGCTTCCTCCAGCCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PDQGKSYSYQSLITYRQMGATPP*LPPAAQ Trigger: CTGAGCGGCTGGAGGAAGCCAAGGTGGAGTTGCACC...CATTTGCCTGTAAGTTATTAAAGACTGATAACTGTAGCTCTTACCTTGGTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | AATGCCCCAGACCAAGGTAAGAGCTACAGTTATCAGTCTTTAATAACTTACAGGACGACATGCAGGGCTTaGAAGTGGGGCAAGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: NAPDQGKSYSYQSLITYRTTCRA*KWGKKE Trigger: CTCCTTCTTGCCCCACTTCCAAGCCCTGCATGTCGT...CCTGTAAGTTATTAAAGACTGATAACTGTAGCTCTTACCTTGGTCTGGGGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR TCA 90 bp | CATCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCTCTGCAGCCTTGCACATaGGTGAGAGTGGCGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HPVTHNLIFISACFANSALQPCT*VRVAAA Trigger: AGCAGCCGCCACTCTCACTCATGTGCAAGGCTGCAG...AGCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR TCA 90 bp | CCAGACCAAGGTAAGAGCTACAGTTATCAGTCTTTAATAACTTACAGGCAAATGTCCTCTCTCCTTCATTaGGGTGGACAGGTCCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: PDQGKSYSYQSLITYRQMSSLLH*GGQVLH Trigger: GTGCAGGACCTGTCCACCTCAATGAAGGAGAGAGGA...CATTTGCCTGTAAGTTATTAAAGACTGATAACTGTAGCTCTTACCTTGGTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR GCA 90 bp | CCATCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCACGTCTCCACAGTCCTaGAGCGCCCACTTCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PSRNTQSNFYKCLLCKFSTSPQS*SAHFSR Trigger: TCTGGAGAAGTGGGCGCTGCAGGACTGTGGAGACGT...GCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | AATTTTTATAAGTGCTTGCTTTGCAAATTCAGCTTCAAGATAAATCTCCCTCCCGCTGGTCCTGCTTGTTaGCCAGCACCAGCACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: NFYKCLLCKFSFKINLPPAGPAC*PAPALA Trigger: TGCCAGTGCTGGTGCTGGCCAACAAGCAGGACCAGC...GGGAGGGAGATTTATCTTGAAGCTGAATTTGCAAAGCAAGCACTTATAAAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | CATCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCTCCTAGAAAAGCAGCCTaGGGAGACTCCCCAGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: HPVTHNLIFISACFANSAPRKAA*GDSPVG Trigger: CCCAACTGGGGAGTCTCCCCAGGCTGCTTTTCTAGG...AGCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | AATGCCCCAGACCAAGGTAAGAGCTACAGTTATCAGTCTTTAATAACTTACAGGTTGGTGGGGACACTCTaGACAAACTCCTTGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: NAPDQGKSYSYQSLITYRLVGTL*TNSLNL Trigger: CAAGTTCAAGGAGTTTGTCCAGAGTGTCCCCACCAA...CCTGTAAGTTATTAAAGACTGATAACTGTAGCTCTTACCTTGGTCTGGGGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CCA 90 bp | CATCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCTGTGGGGAGGGGTTCTTaGCACTTTCACAGACACAAA | + |
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Preference number: 4 (lower is better) Translates to: HPVTHNLIFISACFANSAVGRGS*HFHRHK Trigger: TTTGTGTCTGTGAAAGTGCCAAGAACCCCTCCCCAC...AGCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR TCA 90 bp | AATTTTTATAAGTGCTTGCTTTGCAAATTCAGCTTCAAGATAAATCTCCCTCCCCTTCTCCAGAGAGGATaGGAGAGATATGCAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: NFYKCLLCKFSFKINLPPLLQRG*ERYAKT Trigger: TGTCTTTGCATATCTCTCTCATCCTCTCTGGAGAAG...GGGAGGGAGATTTATCTTGAAGCTGAATTTGCAAAGCAAGCACTTATAAAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR GCA 90 bp | TCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCTTCAGGATGAGAGAGATATaGAAAGACATCCCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SRNTQSNFYKCLLCKFSFRMREI*KDIPSP Trigger: GGGAGATGGGATGTCTTTGCATATCTCTCTCATCCT...GAAGCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| 3UTR CAA 72 bp | CCATCCCGTAACACACAATCTAATTTTTATAAGTGCTaGCTTTGCAAATTCAGCTTCAAGATAAATCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: PSRNTQSNFYKC*LCKFSFKINLP Trigger: AGGGAGATTTATCTTGAAGCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGATGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS GCA 90 bp | AGCCTCTTCTCCACCTCAGCAGCGCTCAGTGCCCCGGGCTGGTCCTaGTTGTTGGCCAGCACCAGCACTGGCACGCCCTGGTTGTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: SLFSTSAALSAPGWS*LLASTSTGTPWLSE Trigger: CTCGGACAACCAGGGCGTGCCAGTGCTGGTGCTGGCCAACAAGCAGGACCAGCCCGGGGCACTGAGCGCTGCTGAGGTGGAGAAGAGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS TCA 90 bp | CCCTGCTGCAGGCCCAGACCGTCCACAGCGCTGCAGCCTTGCACATaGGTGAGAGTGGCGGCTGCTAGCTCTCGGACTGCCAGCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: PCCRPRPSTALQPCT*VRVAAASSRTASLF Trigger: GAAGAGGCTGGCAGTCCGAGAGCTAGCAGCCGCCACTCTCACTCATGTGCAAGGCTGCAGCGCTGTGGACGGTCTGGGCCTGCAGCAGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS TCA 90 bp | GCTGCAGGCCCAGACCGTCCACAGCGCTGCAGCCTTGCACATGAGTaGGAGTGGCGGCTGCTAGCTCTCGGACTGCCAGCCTCTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: AAGPDRPQRCSLAHE*EWRLLALGLPASSP Trigger: TGGAGAAGAGGCTGGCAGTCCGAGAGCTAGCAGCCGCCACTCTCACTCATGTGCAAGGCTGCAGCGCTGTGGACGGTCTGGGCCTGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | ACAGGCTGGTCCCACCCTGCTGTCCAAGTGTGCAGACCCCTACTAGGTGGGAGGCCGGGCTGGTCCTGCTaGTTGGCCAGCACCAGCACT | + |
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Preference number: 5 (lower is better) Translates to: TGWSHPAVQVCRPLLGGRPGWSC*LASTST Trigger: AGTGCTGGTGCTGGCCAACAAGCAGGACCAGCCCGG...CCTCCCACCTAGTAGGGGTCTGCACACTTGGACAGCAGGGTGGGACCAGCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | ACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACAGGTCCTGCACCCCAGTCCGGTGCAACTCCACCTaGGCTTCCTCCAGCCGCTCA | + |
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Preference number: 5 (lower is better) Translates to: TPHAPLSFIEVDRSCTPVRCNST*ASSSRS Trigger: TGAGCGGCTGGAGGAAGCCAAGGTGGAGTTGCACCG...GACTGGGGTGCAGGACCTGTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | TGGCACCAAAACGGGACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACAGGGGCTGGTCCTGCTTGTaGGCCAGCACCAGCACTGGC | + |
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Preference number: 5 (lower is better) Translates to: WHQNGTPHAPLSFIEVDRGWSCL*ASTSTG Trigger: GCCAGTGCTGGTGCTGGCCAACAAGCAGGACCAGCC...CCTGTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGTCCCGTTTTGGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS TCA 90 bp | TGGGTCACCGTCTCTTCTTGCCACCCCGAGCTGCCTTCTTCCTCTTaGGGATCATCTCATAGAGGCGCTCAAGGCCCTGCTGCAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: WVTVSSCHPELPSSS*GSSHRGAQGPAAGP Trigger: TGGGCCTGCAGCAGGGCCTTGAGCGCCTCTATGAGATGATCCTCAAGAGGAAGAAGGCAGCTCGGGGTGGCAAGAAGAGACGGTGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | TGGCACCAAAACGGGACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACAGGGGTCACCGTCTCTTCTaGCCACCCCGAGCTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: WHQNGTPHAPLSFIEVDRGHRLF*PPRAAF Trigger: GAAGGCAGCTCGGGGTGGCAAGAAGAGACGGTGACC...CCTGTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGTCCCGTTTTGGTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | CACAGGCTGGTCCCACCCTGCTGTCCAAGTGTGCAGACCCCTACTAGGTGGGAGTGTGGGGAGGGGTTCTaGGCACTTTCACAGACACAA | + |
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Preference number: 5 (lower is better) Translates to: HRLVPPCCPSVQTPTRWECGEGF*ALSQTQ Trigger: TTGTGTCTGTGAAAGTGCCAAGAACCCCTCCCCACA...CTCCCACCTAGTAGGGGTCTGCACACTTGGACAGCAGGGTGGGACCAGCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | ACACCCCATGCTCCTCTCTCCTTCATTGAGGTGGACAGGTCCTGCACCCCAGTCTCGGTGTTGAAGCCTTaGGTGGGGACACTCTGGACA | + |
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Preference number: 5 (lower is better) Translates to: TPHAPLSFIEVDRSCTPVSVLKP*VGTLWT Trigger: TGTCCAGAGTGTCCCCACCAAAGGCTTCAACACCGA...GACTGGGGTGCAGGACCTGTCCACCTCAATGAAGGAGAGAGGAGCATGGGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | TCACAGTTTACATTTACGTCTCCACAGTCCTGCAGCGCCCACTTCTCCAGAGAGCCCGACGTCCCACACTaGGAAGGTGATGCCACGCGA | + |
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Preference number: 5 (lower is better) Translates to: SQFTFTSPQSCSAHFSREPDVPH*EGDATR Trigger: TCGCGTGGCATCACCTTCCAAGTGTGGGACGTCGGG...CTCTCTGGAGAAGTGGGCGCTGCAGGACTGTGGAGACGTAAATGTAAACTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | ACAGGCTGGTCCCACCCTGCTGTCCAAGTGTGCAGACCCCTACTAGGTGGGAGGTATAGAAATCTTGAATaGTCTCTGGGGCAAGATAAG | + |
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Preference number: 5 (lower is better) Translates to: TGWSHPAVQVCRPLLGGRYRNLE*SLGQDK Trigger: CTTATCTTGCCCCAGAGACAATTCAAGATTTCTATA...CCTCCCACCTAGTAGGGGTCTGCACACTTGGACAGCAGGGTGGGACCAGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | GAGGTAGAGTCACAGTTTACATTTACGTCTCCACAGTCCTGCAGCGCCCACTTCCCCCATATAGAAATCTaGAATTGTCTCTGGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: EVESQFTFTSPQSCSAHFPHIEI*NCLWGK Trigger: CTTGCCCCAGAGACAATTCAAGATTTCTATATGGGG...GAAGTGGGCGCTGCAGGACTGTGGAGACGTAAATGTAAACTGTGACTCTACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | AATTTTTATAAGTGCTTGCTTTGCAAATTCAGCTTCAAGATAAATCTCCCTCCCACTGGCACGCCCTGGTaGTCCGAGGCCCGGCTGATT | + |
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Preference number: 5 (lower is better) Translates to: NFYKCLLCKFSFKINLPPTGTPW*SEARLI Trigger: AATCAGCCGGGCCTCGGACAACCAGGGCGTGCCAGT...GGGAGGGAGATTTATCTTGAAGCTGAATTTGCAAAGCAAGCACTTATAAAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | CCATCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCCACAGCGCTGCAGCCTaGCACATGAGTGAGAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: PSRNTQSNFYKCLLCKFSHSAAA*HMSESG Trigger: GCCACTCTCACTCATGTGCAAGGCTGCAGCGCTGTG...GCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | CCATCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCAGAGGCAGGGAGGCCTaGAAATTGAAGGTTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: PSRNTQSNFYKCLLCKFSRGREA*KLKVPG Trigger: CCCTGGAACCTTCAATTTCAAGGCCTCCCTGCCTCT...GCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | TCCCGTAACACACAATCTAATTTTTATAAGTGCTTGCTTTGCAAATTCAGCTTCCACGACATGCAGGGCTaGGAAGTGGGGCAAGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: SRNTQSNFYKCLLCKFSFHDMQG*EVGQEG Trigger: TCCTTCTTGCCCCACTTCCAAGCCCTGCATGTCGTG...GAAGCTGAATTTGCAAAGCAAGCACTTATAAAAATTAGATTGTGTGTTACGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS-3UTR CAA 90 bp | AATTTTTATAAGTGCTTGCTTTGCAAATTCAGCTTCAAGATAAATCTCCCTCCCCTCCTCTCTCCTTCATaGAGGTGGACAGGTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: NFYKCLLCKFSFKINLPPLLSPS*RWTGPA Trigger: TGCAGGACCTGTCCACCTCAATGAAGGAGAGAGGAG...GGGAGGGAGATTTATCTTGAAGCTGAATTTGCAAAGCAAGCACTTATAAAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS CAA 90 bp | CTCTTCTCCACCTCAGCAGCGCTCAGTGCCCCGGGCTGGTCCTGCTaGTTGGCCAGCACCAGCACTGGCACGCCCTGGTTGTCCGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LFSTSAALSAPGWSC*LASTSTGTPWLSEA Trigger: GGCCTCGGACAACCAGGGCGTGCCAGTGCTGGTGCTGGCCAACAAGCAGGACCAGCCCGGGGCACTGAGCGCTGCTGAGGTGGAGAAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS TCA 72 bp | CCAGCACTGGCACGCCCTGGTTGTCCGAGGCCCGGCTaGTTCGGTGCAACTCCACCTTGGCTTCCTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PALARPGCPRPG*FGATPPWLPPA Trigger: GGCTGGAGGAAGCCAAGGTGGAGTTGCACCGAATCAGCCGGGCCTCGGACAACCAGGGCGTGCCAGTGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS CAA 72 bp | TTGTCCGAGGCCCGGCTGATTCGGTGCAACTCCACCTaGGCTTCCTCCAGCCGCTCAGCCTCCGCAGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: LSEARLIRCNST*ASSSRSASAAS Trigger: GGACGCTGCGGAGGCTGAGCGGCTGGAGGAAGCCAAGGTGGAGTTGCACCGAATCAGCCGGGCCTCGGACAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS TCA 72 bp | CCAGACCGTCCACAGCGCTGCAGCCTTGCACATGAGTaGGAGTGGCGGCTGCTAGCTCTCGGACTGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PDRPQRCSLAHE*EWRLLALGLPA Trigger: GGCTGGCAGTCCGAGAGCTAGCAGCCGCCACTCTCACTCATGTGCAAGGCTGCAGCGCTGTGGACGGTCTGG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS TCA 72 bp | AGGCCCAGACCGTCCACAGCGCTGCAGCCTTGCACATaGGTGAGAGTGGCGGCTGCTAGCTCTCGGACTGCC | + |
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Preference number: 6 (lower is better) Translates to: RPRPSTALQPCT*VRVAAASSRTA Trigger: GGCAGTCCGAGAGCTAGCAGCCGCCACTCTCACTCATGTGCAAGGCTGCAGCGCTGTGGACGGTCTGGGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS CAA 72 bp | TGCTTGTTGGCCAGCACCAGCACTGGCACGCCCTGGTaGTCCGAGGCCCGGCTGATTCGGTGCAACTCCACC | + |
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Preference number: 6 (lower is better) Translates to: CLLASTSTGTPW*SEARLIRCNST Trigger: GGTGGAGTTGCACCGAATCAGCCGGGCCTCGGACAACCAGGGCGTGCCAGTGCTGGTGCTGGCCAACAAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS GCA 72 bp | GGGCTTGGGTCACCGTCTCTTCTTGCCACCCCGAGCTaGCTTCTTCCTCTTGAGGATCATCTCATAGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: GLGSPSLLATPS*LLPLEDHLIEA Trigger: CGCCTCTATGAGATGATCCTCAAGAGGAAGAAGGCAGCTCGGGGTGGCAAGAAGAGACGGTGACCCAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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| CDS TCA 72 bp | AAAGGAGGGAGGTCTTTCCAGCAGAGTCCAGCCCAATaGCCACGACATGCAGGGCTTGGAAGTGGGGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: KGGRSFQQSPAQ*PRHAGLGSGAR Trigger: TCTTGCCCCACTTCCAAGCCCTGCATGTCGTGGTCATTGGGCTGGACTCTGCTGGAAAGACCTCCCTCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320033.5 |
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