Pregenerated sensors for ARL14EPL (Homo sapiens)
Ensembl gene IDs: ENSG00000268223Ensembl transcript IDs: ENST00000601302.3
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACATCCAAATGGCAATTCTaGTTTACAGCTAGTGATGTA | + |
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Preference number: 2 (lower is better) Translates to: SKCGPHISSINITWERGTSKWQF*FTASDV Trigger: TACATCACTAGCTGTAAATCAGAATTGCCATTTGGA...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACAAGGTTACAGAATTATTaGCCATTCTACATTGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SKCGPHISSINITWERGTRLQNY*PFYIVL Trigger: CAGAACAATGTAGAATGGGCAATAATTCTGTAACCT...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACAGTTACATTCTTTGGTTaGAAGTTAAGGGACTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: SKCGPHISSINITWERGTVTFFG*KLRDLK Trigger: TTTCAAGTCCCTTAACTTGCAACCAAAGAATGTAAC...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| 3UTR CCA 72 bp | CAGCAGCATCAACATCACCTGGGAACGTGGAACAGATaGTTGAGCCCTGTCCCAGATTCTGAATGTGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: QQHQHHLGTWNR*LSPVPDSECGA Trigger: AGCCCCACATTCAGAATCTGGGACAGGGCTCAACCATCTGTTCCACGTTCCCAGGTGATGTTGATGCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| 3UTR CCA 72 bp | TCCCCACATCAGCAGCATCAACATCACCTGGGAACGTaGAACAGATGGTTGAGCCCTGTCCCAGATTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: SPHQQHQHHLGT*NRWLSPVPDSE Trigger: TTCAGAATCTGGGACAGGGCTCAACCATCTGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| 3UTR-3UTR CAA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACATGCAAGTTAAGGGACTaGAAAATTGTTGACACAGTT | + |
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Preference number: 3 (lower is better) Translates to: SKCGPHISSINITWERGTCKLRD*KIVDTV Trigger: AACTGTGTCAACAATTTTCAAGTCCCTTAACTTGCA...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| 3UTR CCA 72 bp | GAAGGTTACAGAATTATTGCCCATTCTACATTGTTCTaGGGCTTGACAGAACATGAGTCTTCAGTATGTTTT | + |
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Preference number: 3 (lower is better) Translates to: EGYRIIAHSTLF*GLTEHESSVCF Trigger: AAAACATACTGAAGACTCATGTTCTGTCAAGCCCCAGAACAATGTAGAATGGGCAATAATTCTGTAACCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| 3UTR GCA 72 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTaGAAGTTAAGGGACTTGAAAATTGTTGACACAGTT | + |
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Preference number: 3 (lower is better) Translates to: RNADPSIVTFFG*KLRDLKIVDTV Trigger: AACTGTGTCAACAATTTTCAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR GCA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACAAAACCCACCGTCGGTTaGAGCGGCACTCGGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SKCGPHISSINITWERGTKPTVG*SGTRAH Trigger: GTGGGCCCGAGTGCCGCTGCAACCGACGGTGGGTTT...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR TCA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACACCTCTCCTGACTCAGTaGCGATGGCATCGTAAACCC | + |
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Preference number: 4 (lower is better) Translates to: SKCGPHISSINITWERGTPLLTQ*RWHRKP Trigger: GGGTTTACGATGCCATCGTCACTGAGTCAGGAGAGG...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR TCA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACAGCTGATGACCTCTCCTaGCTCAGTGACGATGGCATC | + |
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Preference number: 4 (lower is better) Translates to: SKCGPHISSINITWERGTADDLS*LSDDGI Trigger: GATGCCATCGTCACTGAGTCAGGAGAGGTCATCAGC...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR TCA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACACGTGGAACAGATGGTTaGGCCCTGTCCCAGATTCTG | + |
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Preference number: 4 (lower is better) Translates to: SKCGPHISSINITWERGTRGTDG*ALSQIL Trigger: CAGAATCTGGGACAGGGCTCAACCATCTGTTCCACG...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CCA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACAGGAACGTGGAACAGATaGTTGAGCCCTGTCCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SKCGPHISSINITWERGTGTWNR*LSPVPD Trigger: ATCTGGGACAGGGCTCAACCATCTGTTCCACGTTCC...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR GCA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACAGCCAAGCATTTTAACTaGCGCTCTATTTGTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SKCGPHISSINITWERGTAKHFN*RSICCS Trigger: ACTGCAACAAATAGAGCGGCAGTTAAAATGCTTGGC...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR GCA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACAATACTTCCAGCTTTGTaGAGTGGCAGTATCATAGTC | + |
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Preference number: 4 (lower is better) Translates to: SKCGPHISSINITWERGTILPAL*SGSIIV Trigger: GACTATGATACTGCCACTGCACAAAGCTGGAAGTAT...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR GCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGTGCGATGAAATCTCTTaGCCTCCTGCTTCGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLCDEIS*PPASAH Trigger: GTGGGCCGAAGCAGGAGGGCAAGAGATTTCATCGCA...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGGTTACACTTCGGGCATaGGTAGAAGCAGCCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLVTLRA*VEAAQA Trigger: TGCCTGGGCTGCTTCTACCCATGCCCGAAGTGTAAC...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGCGGGCCCACACTTGTTaGAGTTACACTTCGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLRAHTC*SYTSGM Trigger: CATGCCCGAAGTGTAACTCCAACAAGTGTGGGCCCG...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR TCA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACATGTTTCTGTCCAATTTaGCAGTTCTTCTCAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: SKCGPHISSINITWERGTCFCPI*QFFSGK Trigger: TTTTCCTGAGAAGAACTGTCAAATTGGACAGAAACA...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGGTGGTTCTCAAAGTGTaGTCCCCACATCAGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLVVLKV*SPHQQH Trigger: ATGCTGCTGATGTGGGGACCACACTTTGAGAACCAC...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGAAAGTCTGCTACCTGTaGTCCAGGGTTTCGAAATGC | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLKVCYL*SRVSKC Trigger: GCATTTCGAAACCCTGGACCACAGGTAGCAGACTTT...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR GCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGTTCAGGATTAAAGTCTaGTACCTGTGGTCCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLFRIKV*YLWSRV Trigger: AACCCTGGACCACAGGTAGCAGACTTTAATCCTGAA...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR GCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGTTAAGTTTCAAACTGTaGACTGTTCTGAGTGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLLSFKL*TVLSGA Trigger: CGCACCACTCAGAACAGTGCACAGTTTGAAACTTAA...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR GCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGCGGGCTTTCTTTTTCTaGTGCCTTGTTTCAGGATTA | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLRAFFF*CLVSGL Trigger: TAATCCTGAAACAAGGCAGCAGAAAAAGAAAGCCCG...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR GCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGTGCCGCTCTATTTGTTaGAGTTGTTTCTGTCCAATT | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLCRSIC*SCFCPI Trigger: AATTGGACAGAAACAACTGCAACAAATAGAGCGGCA...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR TCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGTCTGTGTGTCTCTCTTaGATGGAATTGTTTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLSVCLS*MELFFS Trigger: AGAGAAAAACAATTCCATTCAAGAGAGACACACAGA...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR TCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGTCCAAATGGCAATTCTaGTTTACAGCTAGTGATGTA | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLSKWQF*FTASDV Trigger: TACATCACTAGCTGTAAATCAGAATTGCCATTTGGA...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR GCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGGCTTTCTTTTTCTGCTaGCTTGTTTCAGGATTAAAG | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLAFFFC*LVSGLK Trigger: CTTTAATCCTGAAACAAGGCAGCAGAAAAAGAAAGC...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR GCA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGGTTACATTCTTTGGTTaGAAGTTAAGGGACTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: RNADPSIVTFFGCKLRDLVTFFG*KLRDLK Trigger: TTTCAAGTCCCTTAACTTGCAACCAAAGAATGTAAC...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| 3UTR CAA 72 bp | TCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTaGAAAATTGTTGACACAGTTAAGAAGGTTACAGAA | + |
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Preference number: 4 (lower is better) Translates to: SIVTFFGCKLRD*KIVDTVKKVTE Trigger: TTCTGTAACCTTCTTAACTGTGTCAACAATTTTCAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS CCA 90 bp | CGTAAACCCACCGTCGGTTGCAGCGGCACTCGGGCCCACACTTGTTaGAGTTACACTTCGGGCATGGGTAGAAGCAGCCCAGGCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: RKPTVGCSGTRAHTC*SYTSGMGRSSPGSS Trigger: AGAACTGCCTGGGCTGCTTCTACCCATGCCCGAAGTGTAACTCCAACAAGTGTGGGCCCGAGTGCCGCTGCAACCGACGGTGGGTTTACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS TCA 90 bp | CACCTAGTCAGGAACATTAAACGGCAGCGTGCTGATGACCTCTCCTaGCTCAGTGACGATGGCATCGTAAACCCACCGTCGGTTGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: HLVRNIKRQRADDLS*LSDDGIVNPPSVAA Trigger: CGCTGCAACCGACGGTGGGTTTACGATGCCATCGTCACTGAGTCAGGAGAGGTCATCAGCACGCTGCCGTTTAATGTTCCTGACTAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CAA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACACTGCCGCTCTATTTGTaGCAGTTGTTTCTGTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: SKCGPHISSINITWERGTLPLYL*QLFLSN Trigger: ATTGGACAGAAACAACTGCAACAAATAGAGCGGCAG...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CAA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGCACTCGGGCCCACACTaGTTGGAGTTACACTTCGGG | + |
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Preference number: 5 (lower is better) Translates to: RNADPSIVTFFGCKLRDLHSGPH*LELHFG Trigger: CCCGAAGTGTAACTCCAACAAGTGTGGGCCCGAGTG...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CAA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACAATGCTGATCCCTCCATaGTTACATTCTTTGGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: SKCGPHISSINITWERGTMLIPP*LHSLVA Trigger: TGCAACCAAAGAATGTAACAATGGAGGGATCAGCAT...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CAA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACAATGAGCCTGCCACTTTaGTCATACTTCCTCATTATT | + |
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Preference number: 5 (lower is better) Translates to: SKCGPHISSINITWERGTMSLPL*SYFLII Trigger: AATAATGAGGAAGTATGACAAAAGTGGCAGGCTCAT...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CAA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGTCGGGCCCACACTTGTaGGAGTTACACTTCGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: RNADPSIVTFFGCKLRDLSGPHL*ELHFGH Trigger: ATGCCCGAAGTGTAACTCCAACAAGTGTGGGCCCGA...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CAA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACATTGTTTCTGTCCAATTaGACAGTTCTTCTCAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SKCGPHISSINITWERGTLFLSN*TVLLRK Trigger: TTTCCTGAGAAGAACTGTCAAATTGGACAGAAACAA...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CAA 90 bp | TCAAAGTGTGGTCCCCACATCAGCAGCATCAACATCACCTGGGAACGTGGAACACTCTATTTGTTGCAGTaGTTTCTGTCCAATTTGACA | + |
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Preference number: 5 (lower is better) Translates to: SKCGPHISSINITWERGTLYLLQ*FLSNLT Trigger: TGTCAAATTGGACAGAAACAACTGCAACAAATAGAG...TGTTCCACGTTCCCAGGTGATGTTGATGCTGCTGATGTGGGGACCACACTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS TCA 90 bp | GGCAGTTCTTCTCTAGACAATCACACAGATCAGCGTCATTACAGATaGGCCTGCCACTTTTGTCATACTTCCTCATTATTTTGTATTTGG | + |
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Preference number: 5 (lower is better) Translates to: GSSSLDNHTDQRHYR*ACHFCHTSSLFCIW Trigger: CCAAATACAAAATAATGAGGAAGTATGACAAAAGTGGCAGGCTCATCTGTAATGACGCTGATCTGTGTGATTGTCTAGAGAAGAACTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS GCA 90 bp | GAAAAATATTCATTCATCTTTGACATCCGGGCTTTCTTTTTCTGCTaGCTTGTTTCAGGATTAAAGTCTGCTACCTGTGGTCCAGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: EKYSFIFDIRAFFFC*LVSGLKSATCGPGF Trigger: AAACCCTGGACCACAGGTAGCAGACTTTAATCCTGAAACAAGGCAGCAGAAAAAGAAAGCCCGGATGTCAAAGATGAATGAATATTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS-3UTR CAA 90 bp | AGAAATGCTGATCCCTCCATTGTTACATTCTTTGGTTGCAAGTTAAGGGACTTGTCATCTCTGATCACTTaGACAGTCCTTAGCATCATA | + |
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Preference number: 5 (lower is better) Translates to: RNADPSIVTFFGCKLRDLSSLIT*TVLSII Trigger: TATGATGCTAAGGACTGTCAAAGTGATCAGAGATGA...CAAGTCCCTTAACTTGCAACCAAAGAATGTAACAATGGAGGGATCAGCATTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS CCA 72 bp | ACCGTCGGTTGCAGCGGCACTCGGGCCCACACTTGTTaGAGTTACACTTCGGGCATGGGTAGAAGCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: TVGCSGTRAHTC*SYTSGMGRSSP Trigger: TGGGCTGCTTCTACCCATGCCCGAAGTGTAACTCCAACAAGTGTGGGCCCGAGTGCCGCTGCAACCGACGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS TCA 72 bp | AGGAACATTAAACGGCAGCGTGCTGATGACCTCTCCTaGCTCAGTGACGATGGCATCGTAAACCCACCGTCG | + |
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Preference number: 6 (lower is better) Translates to: RNIKRQRADDLS*LSDDGIVNPPS Trigger: CGACGGTGGGTTTACGATGCCATCGTCACTGAGTCAGGAGAGGTCATCAGCACGCTGCCGTTTAATGTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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| CDS CCA 72 bp | ACAACTCTTAAGTTTCAAACTGTGCACTGTTCTGAGTaGTGCGATGAAATCTCTTGCCCTCCTGCTTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: TTLKFQTVHCSE*CDEISCPPASA Trigger: GGCCGAAGCAGGAGGGCAAGAGATTTCATCGCACCACTCAGAACAGTGCACAGTTTGAAACTTAAGAGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601302.3 |
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