Pregenerated sensors for ARL14 (Homo sapiens)
Ensembl gene IDs: ENSG00000179674Ensembl transcript IDs: ENST00000320767.4
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAGCACGGTGGAAATTCAATACCTGTTACAGCTGGAAACAATCTaGAAGAATTCTGACTCTATTAGCAGACAGCTTACTAAAACTTTG | + |
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Preference number: 1 (lower is better) Translates to: RSTVEIQYLLQLETI*KNSDSISRQLTKTL Trigger: CAAAGTTTTAGTAAGCTGTCTGCTAATAGAGTCAGAATTCTTCCAGATTGTTTCCAGCTGTAACAGGTATTGAATTTCCACCGTGCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| 3UTR-3UTR CCA 90 bp | CAATCTGGAAGAATTCTGACTCTATTAGCAGACAGCTTACTAAAACTTTGTTCTTTTCCTCATTTGGCATaGAAAAACAATTACCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: QSGRILTLLADSLLKLCSFPHLA*KNNYPF Trigger: GAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAA...AGAACAAAGTTTTAGTAAGCTGTCTGCTAATAGAGTCAGAATTCTTCCAGATTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| 3UTR-3UTR CAA 90 bp | CAATCTGGAAGAATTCTGACTCTATTAGCAGACAGCTTACTAAAACTTTGTTCTGATCATTGCCACAGTTaGCTAAAGTTCCTGGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: QSGRILTLLADSLLKLCSDHCHS*LKFLAE Trigger: TTCAGCCAGGAACTTTAGCAAACTGTGGCAATGATC...AGAACAAAGTTTTAGTAAGCTGTCTGCTAATAGAGTCAGAATTCTTCCAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| 3UTR CCA 72 bp | GTGGAAATTCAATACCTGTTACAGCTGGAAACAATCTaGAAGAATTCTGACTCTATTAGCAGACAGCTTACT | + |
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Preference number: 3 (lower is better) Translates to: VEIQYLLQLETI*KNSDSISRQLT Trigger: AGTAAGCTGTCTGCTAATAGAGTCAGAATTCTTCCAGATTGTTTCCAGCTGTAACAGGTATTGAATTTCCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR TCA 90 bp | CAATCTGGAAGAATTCTGACTCTATTAGCAGACAGCTTACTAAAACTTTGTTCTATCCAGTTAATTTCCTaGACCCCTGGGCCAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: QSGRILTLLADSLLKLCSIQLIS*TPGPAP Trigger: AGGGGCTGGCCCAGGGGTTCAGGAAATTAACTGGAT...AGAACAAAGTTTTAGTAAGCTGTCTGCTAATAGAGTCAGAATTCTTCCAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR GCA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTTCGCAGCCTCAGTTCTaGTTGAAGAACGCCAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: DFLIWHGKTITLSTSSVSSQPQF*LKNAKV Trigger: CACTTTGGCGTTCTTCAAGCAGAACTGAGGCTGCGA...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR TCA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTAGTAGACTTCCCAGCTaGGTCAAGTCCCAAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: DFLIWHGKTITLSTSSVSSRLPS*VKSQKK Trigger: CTTCTTTTGGGACTTGACTCAGCTGGGAAGTCTACT...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR TCA 90 bp | CAATCTGGAAGAATTCTGACTCTATTAGCAGACAGCTTACTAAAACTTTGTTCTTGCTCAAACTGTCTCTaGGACTCTTCCAGTCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QSGRILTLLADSLLKLCSCSNCL*DSSSRC Trigger: ACAGCGACTGGAAGAGTCTCAGAGACAGTTTGAGCA...AGAACAAAGTTTTAGTAAGCTGTCTGCTAATAGAGTCAGAATTCTTCCAGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR TCA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTCAACATCCCAGACTGTaGGTGAAAGATTCCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: DFLIWHGKTITLSTSSVSQHPRL*VKDSFP Trigger: TGGAAAGGAATCTTTCACTCACAGTCTGGGATGTTG...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CCA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTCCCAAAAGAAGAACTTaGGCTTGTTTGGTTTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: DFLIWHGKTITLSTSSVSPKRRT*ACLVCG Trigger: TCCGCAAACCAAACAAGCCCAAGTTCTTCTTTTGGG...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CCA 90 bp | CAATCTGGAAGAATTCTGACTCTATTAGCAGACAGCTTACTAAAACTTTGTTCTGTCTCTGTAGAGACTTaGATTTTTCGCAGCCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: QSGRILTLLADSLLKLCSVSVET*IFRSLS Trigger: ACTGAGGCTGCGAAAAATCCAAGTCTCTACAGAGAC...AGAACAAAGTTTTAGTAAGCTGTCTGCTAATAGAGTCAGAATTCTTCCAGATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR GCA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTATTCCCAGTGATCATTaGCACAGTTTGCTAAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: DFLIWHGKTITLSTSSVSIPSDH*HSLLKF Trigger: GAACTTTAGCAAACTGTGGCAATGATCACTGGGAAT...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CCA 90 bp | CAATCTGGAAGAATTCTGACTCTATTAGCAGACAGCTTACTAAAACTTTGTTCTCTTTCTTTCTTCGAATaGCCAGAGACAATGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: QSGRILTLLADSLLKLCSLSFFE*PETMCP Trigger: AGGACACATTGTCTCTGGCCATTCGAAGAAAGAAAG...AGAACAAAGTTTTAGTAAGCTGTCTGCTAATAGAGTCAGAATTCTTCCAGATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CCA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTGCATGTCTTGTTTGTTaGCTAATAGAACAACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: DFLIWHGKTITLSTSSVSACLVC*LIEQQA Trigger: TGCCTGTTGTTCTATTAGCCAACAAACAAGACATGC...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CCA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTCCTCTTGATTTCATGTaGCTCTTCACAAATCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: DFLIWHGKTITLSTSSVSPLDFM*LFTNPV Trigger: AACTGGATTTGTGAAGAGCCACATGAAATCAAGAGG...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CCA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTTTTCCTCATTTGGCATaGAAAAACAATTACCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: DFLIWHGKTITLSTSSVSFPHLA*KNNYPF Trigger: GAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAA...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CCA 90 bp | CAATCTGGAAGAATTCTGACTCTATTAGCAGACAGCTTACTAAAACTTTGTTCTACAATGTGTCCTTTCTaGATCTCACATGAAAATGTT | + |
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Preference number: 4 (lower is better) Translates to: QSGRILTLLADSLLKLCSTMCPF*ISHENV Trigger: AACATTTTCATGTGAGATCCAGAAAGGACACATTGT...AGAACAAAGTTTTAGTAAGCTGTCTGCTAATAGAGTCAGAATTCTTCCAGATTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS GCA 90 bp | CATCAGTGTCTCTGTAGAGACTTGGATTTTTCGCAGCCTCAGTTCTaGTTGAAGAACGCCAAAGTGTCTCCTCTTGATTTCATGTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: HQCLCRDLDFSQPQF*LKNAKVSPLDFMWL Trigger: GAGCCACATGAAATCAAGAGGAGACACTTTGGCGTTCTTCAAGCAGAACTGAGGCTGCGAAAAATCCAAGTCTCTACAGAGACACTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS CCA 90 bp | AGGAGAGTAGACTTCCCAGCTGAGTCAAGTCCCAAAAGAAGAACTTaGGCTTGTTTGGTTTGCGGATTTTTAGAACCCAGCGAACCCATT | + |
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Preference number: 5 (lower is better) Translates to: RRVDFPAESSPKRRT*ACLVCGFLEPSEPI Trigger: AATGGGTTCGCTGGGTTCTAAAAATCCGCAAACCAAACAAGCCCAAGTTCTTCTTTTGGGACTTGACTCAGCTGGGAAGTCTACTCTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CAA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTCAGCCTCAGTTCTGCTaGAAGAACGCCAAAGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: DFLIWHGKTITLSTSSVSQPQFC*KNAKVS Trigger: AGACACTTTGGCGTTCTTCAAGCAGAACTGAGGCTG...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CAA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTTGTCTCTGTAGAGACTaGGATTTTTCGCAGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: DFLIWHGKTITLSTSSVSCLCRD*DFSQPQ Trigger: CTGAGGCTGCGAAAAATCCAAGTCTCTACAGAGACA...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CAA 90 bp | CAATCTGGAAGAATTCTGACTCTATTAGCAGACAGCTTACTAAAACTTTGTTCTTCTTCCAGTCGCTGTTaGTCTGTACTGTCCACAACA | + |
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Preference number: 5 (lower is better) Translates to: QSGRILTLLADSLLKLCSSSSRC*SVLSTT Trigger: TGTTGTGGACAGTACAGACAAACAGCGACTGGAAGA...AGAACAAAGTTTTAGTAAGCTGTCTGCTAATAGAGTCAGAATTCTTCCAGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CAA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTGGCATGTCTTGTTTGTaGGCTAATAGAACAACAGGC | + |
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Preference number: 5 (lower is better) Translates to: DFLIWHGKTITLSTSSVSGMSCL*ANRTTG Trigger: GCCTGTTGTTCTATTAGCCAACAAACAAGACATGCC...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CAA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTCCAAAGTGTCTCCTCTaGATTTCATGTGGCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: DFLIWHGKTITLSTSSVSPKCLL*ISCGSS Trigger: TGAAGAGCCACATGAAATCAAGAGGAGACACTTTGG...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CAA 90 bp | CAATCTGGAAGAATTCTGACTCTATTAGCAGACAGCTTACTAAAACTTTGTTCTTTGGGCTTGTTTGGTTaGCGGATTTTTAGAACCCAG | + |
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Preference number: 5 (lower is better) Translates to: QSGRILTLLADSLLKLCSLGLFG*RIFRTQ Trigger: CTGGGTTCTAAAAATCCGCAAACCAAACAAGCCCAA...AGAACAAAGTTTTAGTAAGCTGTCTGCTAATAGAGTCAGAATTCTTCCAGATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CAA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTCCAGGCATGTCTTGTTaGTTGGCTAATAGAACAACA | + |
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Preference number: 5 (lower is better) Translates to: DFLIWHGKTITLSTSSVSPGMSC*LANRTT Trigger: TGTTGTTCTATTAGCCAACAAACAAGACATGCCTGG...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CAA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTCAAAGCTTCTTCACTTaGAACATTCTGGTGATGTCC | + |
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Preference number: 5 (lower is better) Translates to: DFLIWHGKTITLSTSSVSQSFFT*NILVMS Trigger: GGACATCACCAGAATGTTCAAAGTGAAGAAGCTTTG...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CAA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTAAGAAGAACTTGGGCTaGTTTGGTTTGCGGATTTTT | + |
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Preference number: 5 (lower is better) Translates to: DFLIWHGKTITLSTSSVSKKNLG*FGLRIF Trigger: AAAAATCCGCAAACCAAACAAGCCCAAGTTCTTCTT...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CAA 90 bp | GATTTCCTCATTTGGCATGGAAAAACAATTACCCTTTCAACTTCATCAGTGTCTTCGATCATTTCCACATaGAAACCTATTGTAGGGATG | + |
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Preference number: 5 (lower is better) Translates to: DFLIWHGKTITLSTSSVSSIIST*KPIVGM Trigger: CATCCCTACAATAGGTTTCAATGTGGAAATGATCGA...AGACACTGATGAAGTTGAAAGGGTAATTGTTTTTCCATGCCAAATGAGGAAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS-3UTR CAA 90 bp | CAATCTGGAAGAATTCTGACTCTATTAGCAGACAGCTTACTAAAACTTTGTTCTAGAACTTGGGCTTGTTaGGTTTGCGGATTTTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: QSGRILTLLADSLLKLCSRTWAC*VCGFLE Trigger: TTCTAAAAATCCGCAAACCAAACAAGCCCAAGTTCT...AGAACAAAGTTTTAGTAAGCTGTCTGCTAATAGAGTCAGAATTCTTCCAGATTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS CAA 90 bp | CAGGGTTGCACATACCAGTTCCGGTCACTGCAAAGCTTCTTCACTTaGAACATTCTGGTGATGTCCTCAGCAGTCAGAGCTCCAGGCATG | + |
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Preference number: 6 (lower is better) Translates to: QGCTYQFRSLQSFFT*NILVMSSAVRAPGM Trigger: CATGCCTGGAGCTCTGACTGCTGAGGACATCACCAGAATGTTCAAAGTGAAGAAGCTTTGCAGTGACCGGAACTGGTATGTGCAACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS CAA 90 bp | GACTTCCCAGCTGAGTCAAGTCCCAAAAGAAGAACTTGGGCTTGTTaGGTTTGCGGATTTTTAGAACCCAGCGAACCCATTTCAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: DFPAESSPKRRTWAC*VCGFLEPSEPISAF Trigger: AAAGGCTGAAATGGGTTCGCTGGGTTCTAAAAATCCGCAAACCAAACAAGCCCAAGTTCTTCTTTTGGGACTTGACTCAGCTGGGAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS CAA 90 bp | CAGTGTCTCTGTAGAGACTTGGATTTTTCGCAGCCTCAGTTCTGCTaGAAGAACGCCAAAGTGTCTCCTCTTGATTTCATGTGGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: QCLCRDLDFSQPQFC*KNAKVSPLDFMWLF Trigger: GAAGAGCCACATGAAATCAAGAGGAGACACTTTGGCGTTCTTCAAGCAGAACTGAGGCTGCGAAAAATCCAAGTCTCTACAGAGACACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS CCA 72 bp | GACTTCCCAGCTGAGTCAAGTCCCAAAAGAAGAACTTaGGCTTGTTTGGTTTGCGGATTTTTAGAACCCAGC | + |
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Preference number: 6 (lower is better) Translates to: DFPAESSPKRRT*ACLVCGFLEPS Trigger: GCTGGGTTCTAAAAATCCGCAAACCAAACAAGCCCAAGTTCTTCTTTTGGGACTTGACTCAGCTGGGAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS CAA 72 bp | GCTGAGTCAAGTCCCAAAAGAAGAACTTGGGCTTGTTaGGTTTGCGGATTTTTAGAACCCAGCGAACCCATT | + |
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Preference number: 6 (lower is better) Translates to: AESSPKRRTWAC*VCGFLEPSEPI Trigger: AATGGGTTCGCTGGGTTCTAAAAATCCGCAAACCAAACAAGCCCAAGTTCTTCTTTTGGGACTTGACTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS CAA 72 bp | TGTAGAGACTTGGATTTTTCGCAGCCTCAGTTCTGCTaGAAGAACGCCAAAGTGTCTCCTCTTGATTTCATG | + |
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Preference number: 6 (lower is better) Translates to: CRDLDFSQPQFC*KNAKVSPLDFM Trigger: CATGAAATCAAGAGGAGACACTTTGGCGTTCTTCAAGCAGAACTGAGGCTGCGAAAAATCCAAGTCTCTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS CAA 90 bp | CTGGTGATGTCCTCAGCAGTCAGAGCTCCAGGCATGTCTTGTTTGTaGGCTAATAGAACAACAGGCACATTTTTAATGTGTTCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LVMSSAVRAPGMSCL*ANRTTGTFLMCSFF Trigger: GAAGAATGAACACATTAAAAATGTGCCTGTTGTTCTATTAGCCAACAAACAAGACATGCCTGGAGCTCTGACTGCTGAGGACATCACCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS CAA 72 bp | TCCTCAGCAGTCAGAGCTCCAGGCATGTCTTGTTTGTaGGCTAATAGAACAACAGGCACATTTTTAATGTGT | + |
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Preference number: 6 (lower is better) Translates to: SSAVRAPGMSCL*ANRTTGTFLMC Trigger: ACACATTAAAAATGTGCCTGTTGTTCTATTAGCCAACAAACAAGACATGCCTGGAGCTCTGACTGCTGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS CAA 72 bp | ATGTCCTCAGCAGTCAGAGCTCCAGGCATGTCTTGTTaGTTGGCTAATAGAACAACAGGCACATTTTTAATG | + |
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Preference number: 6 (lower is better) Translates to: MSSAVRAPGMSC*LANRTTGTFLM Trigger: CATTAAAAATGTGCCTGTTGTTCTATTAGCCAACAAACAAGACATGCCTGGAGCTCTGACTGCTGAGGACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS CAA 90 bp | ATTCTGGTGATGTCCTCAGCAGTCAGAGCTCCAGGCATGTCTTGTTaGTTGGCTAATAGAACAACAGGCACATTTTTAATGTGTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: ILVMSSAVRAPGMSC*LANRTTGTFLMCSF Trigger: GAATGAACACATTAAAAATGTGCCTGTTGTTCTATTAGCCAACAAACAAGACATGCCTGGAGCTCTGACTGCTGAGGACATCACCAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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| CDS CAA 90 bp | GAAAAACAATTACCCTTTCAACTTCATCAGTGTCTCTGTAGAGACTaGGATTTTTCGCAGCCTCAGTTCTGCTTGAAGAACGCCAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: EKQLPFQLHQCLCRD*DFSQPQFCLKNAKV Trigger: CACTTTGGCGTTCTTCAAGCAGAACTGAGGCTGCGAAAAATCCAAGTCTCTACAGAGACACTGATGAAGTTGAAAGGGTAATTGTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000320767.4 |
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