RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARL13B (Homo sapiens)

Ensembl gene IDs: ENSG00000169379

Ensembl transcript IDs: ENST00000303097.11, ENST00000335438.7, ENST00000394222.8, ENST00000460371.5, ENST00000471138.5, ENST00000475206.3, ENST00000478400.3, ENST00000486562.2, ENST00000492165.3, ENST00000535334.5, ENST00000679404.1, ENST00000679587.1, ENST00000679601.1, ENST00000679607.1, ENST00000679654.1, ENST00000679657.1, ENST00000679666.1, ENST00000679739.1, ENST00000679872.1, ENST00000680414.1, ENST00000680430.1, ENST00000680994.1, ENST00000681013.1, ENST00000681247.1, ENST00000681380.1, ENST00000681655.1

Found 1068 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAATGATTACAGATGCTATTGGCTGGAAAGGATTCGTTGGTTCTaGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTG +
Preference number: 1 (lower is better)
Translates to: LNDYRCYWLERIRWF*VQLSQTTGSIEFSL
Trigger: CAGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR CCA 90 bp TTCATTCTCAATGATTACAGATGCTATTGGCTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTC +
Preference number: 1 (lower is better)
Translates to: FILNDYRCYWLERIR*FWVQLSQTTGSIEF
Trigger: GAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR TCA 90 bp TTCACCTTGCTGATATTAAGAGAACTCCTCCATACGTCTTGTTTATaGGATCACATCATGAGCATCACTGTTAGGTCGCTGTGGCACAGC +
Preference number: 1 (lower is better)
Translates to: FTLLILRELLHTSCL*DHIMSITVRSLWHS
Trigger: GCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTGATCTCATAAACAAGACGTATGGAGGAGTTCTCTTAATATCAGCAAGGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR CCA 90 bp CTTTCAAGTTTTCCTTCATTCTCAATGATTACAGATGCTATTGGCTaGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTG +
Preference number: 1 (lower is better)
Translates to: LSSFPSFSMITDAIG*KGFVGSGSNSARPL
Trigger: CAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAAGGAAAACTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR GCA 90 bp ACTCGTTCAGCTCTTTCTTGTTTCTCTTGTTCCTCAAGAGCACGCTaGTCTGTTGTCTCTTTTTGGATGCGTTCATTTAAGGCATCAAAG +
Preference number: 1 (lower is better)
Translates to: TRSALSCFSCSSRAR*SVVSFWMRSFKASK
Trigger: CTTTGATGCCTTAAATGAACGCATCCAAAAAGAGACAACAGAGCAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGAGCTGAACGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
3UTR CCA 90 bp TGTTTCTCTTGTTCCTCAAGAGCACGCTGCTCTGTTGTCTCTTTTTaGATGCGTTCATTTAAGGCATCAAAGTCTCTTGCAATAACATGT +
Preference number: 1 (lower is better)
Translates to: CFSCSSRARCSVVSF*MRSFKASKSLAITC
Trigger: ACATGTTATTGCAAGAGACTTTGATGCCTTAAATGAACGCATCCAAAAAGAGACAACAGAGCAGCGTGCTCTTGAGGAACAAGAGAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR CCA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 2 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp CTCTCAGGAGCACAGTCATCTATATTAAGTGGTTCTACCCGGTGGTTCCTTTTCGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 2 (lower is better)
Translates to: LSGAQSSILSGSTRWFLFGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp CACATCATGAGCATCACTGTTAGGTCGCTGTGGCACAGCCAGGGGAGGCAGTGGGAGATAGACATTCAATaGCATCAGCTTCTCCTAAAG +
Preference number: 2 (lower is better)
Translates to: HIMSITVRSLWHSQGRQWEIDIQ*HQLLLK
Trigger: CTTTAGGAGAAGCTGATGTCATTGAATGTCTATCTC...CCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR CCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 2 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp CACATCATGAGCATCACTGTTAGGTCGCTGTGGCACAGCCAGGGGAGGCAGTGGAAGAGGCTCAAGTTTTaGAAGTCTAGTGACTTTAGG +
Preference number: 2 (lower is better)
Translates to: HIMSITVRSLWHSQGRQWKRLKF*KSSDFR
Trigger: CCTAAAGTCACTAGACTTCCAAAACTTGAGCCTCTT...CCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp TTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCCCAAGTCAAAGATGGTaGCTTCAAACTTTCCTTGTC +
Preference number: 2 (lower is better)
Translates to: FVGSGSNSARPLVPSSSAPSQRW*LQTFLV
Trigger: GACAAGGAAAGTTTGAAGTCACCATCTTTGACTTGG...GGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR TCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCATACCCCGAGATTGCTaGACATGGTTCTATCTGACA +
Preference number: 2 (lower is better)
Translates to: LERIRWFWVQLSQTTGSIIPRDC*TWFYLT
Trigger: TGTCAGATAGAACCATGTTCAGCAATCTCGGGGTAT...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR GCA 90 bp CACATCATGAGCATCACTGTTAGGTCGCTGTGGCACAGCCAGGGGAGGCAGTGGCTCAATGATTACAGATaGTATTGGCTGGAAAGGATT +
Preference number: 2 (lower is better)
Translates to: HIMSITVRSLWHSQGRQWLNDYR*YWLERI
Trigger: AATCCTTTCCAGCCAATAGCATCTGTAATCATTGAG...CCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTAGTGGTTCTACCCGGTaGTTCCTTTTCATTCTTAGT +
Preference number: 2 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGSGSTR*FLFILS
Trigger: ACTAAGAATGAAAAGGAACCACCGGGTAGAACCACT...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTGTCATCTATATTAAGTaGTTCTACCCGGTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGVIYIK*FYPVVP
Trigger: AGGAACCACCGGGTAGAACCACTTAATATAGATGAC...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: AKYRILWMPFLSAREVLSRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 2 (lower is better)
Translates to: KELESPKRVTAASDGTRENRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTGAGCACCTTGATCTCTaGAAGTGTCTAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGEHLDL*KCLTFK
Trigger: TTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTC...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR GCA 90 bp TTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCACCAGGGACCAGTTTTaGAGAAGACAATTTTTCCAT +
Preference number: 2 (lower is better)
Translates to: FVGSGSNSARPLVPSSSATRDQF*RRQFFH
Trigger: ATGGAAAAATTGTCTTCTGCAAAACTGGTCCCTGGT...GGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680430.1
3UTR-3UTR CCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 2 (lower is better)
Translates to: CQIQNLMDAILKCKRSAIGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp AAATCAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 2 (lower is better)
Translates to: KSNAFTSLSVVAKSHVQTGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...AGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp CTTGCTGATATTAAGAGAACTCCTCCATACGTCTTGTTTATGAGATCACATCATAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: LADIKRTPPYVLFMRSHHRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...ATGATGTGATCTCATAAACAAGACGTATGGAGGAGTTCTCTTAATATCAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 2 (lower is better)
Translates to: AKYRILWMPFLSAREVLSNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp TTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCATCAAGTCAGGTCCTTaGGTATTAATCTTCTCACTA +
Preference number: 2 (lower is better)
Translates to: FVGSGSNSARPLVPSSSAIKSGP*VLIFSL
Trigger: TAGTGAGAAGATTAATACTCAAGGACCTGACTTGAT...GGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTTCTGTTGTCTCTTTTTaGATGCGTTCATTTAAGGCA +
Preference number: 2 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGSVVSF*MRSFKA
Trigger: TGCCTTAAATGAACGCATCCAAAAAGAGACAACAGA...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR CCA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 2 (lower is better)
Translates to: LNAKYRILWMPFLSAREVGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 2 (lower is better)
Translates to: LNAKYRILWMPFLSAREVNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp ATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTGACTTTAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 2 (lower is better)
Translates to: IIMMCFTKRLKFWKSSDFNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...AAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp AAATCAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: KSNAFTSLSVVAKSHVQTTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...AGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAAACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: LERIRWFWVQLSQTTGSIIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGACTCAGCCAGACCACTaGTTCCATCGAGTTCAGCCT +
Preference number: 2 (lower is better)
Translates to: LESPKRVTAASDGTREYRTQPDH*FHRVQP
Trigger: AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGT...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAAGGATTCGTTGGTTCTaGGTCCAACTCAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQRIRWF*VQLSQT
Trigger: GGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCT...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp TTCTCAATGATTACAGATGCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCGAACATGGTTCTATCTaGCACAGGCACTTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: FSMITDAIGWKGFVGSGSEHGSI*HRHLCS
Trigger: TGAGCACAAGTGCCTGTGTCAGATAGAACCATGTTC...GGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR GCA 90 bp TTCTCAATGATTACAGATGCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCTCCTCAAGAGCACGCTaGTCTGTTGTCTCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: FSMITDAIGWKGFVGSGSSSRAR*SVVSFW
Trigger: CCAAAAAGAGACAACAGAGCAGCGTGCTCTTGAGGA...GGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp ACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAATCTTAACAAGGTGGACTCAGCCAGACCACTaGTTCCATCGAGTTCAGCCT +
Preference number: 2 (lower is better)
Translates to: TCLLCQYKLPKAPILTRWTQPDH*FHRVQP
Trigger: AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGT...CCACCTTGTTAAGATTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAACTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGC +
Preference number: 2 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQLERIR*FWVQLS
Trigger: GCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCTCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 2 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSSEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAACATGGTTCTATCTaGCACAGGCACTTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQEHGSI*HRHLCS
Trigger: TGAGCACAAGTGCCTGTGTCAGATAGAACCATGTTC...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR TCA 90 bp GCTGATTCCAATGATGGCCGGTCTGTCTCATCTTCATTCTTTAACTGCTGTGTTATACCCCGAGATTGCTaGACATGGTTCTATCTGACA +
Preference number: 2 (lower is better)
Translates to: ADSNDGRSVSSSFFNCCVIPRDC*TWFYLT
Trigger: TGTCAGATAGAACCATGTTCAGCAATCTCGGGGTAT...AACACAGCAGTTAAAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR GCA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATCCTCAAGAGCACGCTaGTCTGTTGTCTCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQESSRAR*SVVSFW
Trigger: CCAAAAAGAGACAACAGAGCAGCGTGCTCTTGAGGA...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAAGGATTCGTTGGTTCTaGGTCCAACTCAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: AKYRILWMPFLSAREVLSRIRWF*VQLSQT
Trigger: GGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCT...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp TGGCTTCCTATAGAAATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAGGATTCGTTGGTTCTaGGTCCAACTCAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: WLPIEIIMMCFTKRLKFWRIRWF*VQLSQT
Trigger: GGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCT...CCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGATTTCTATAGGAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAAGCCAGGGGAGGCAGTaGCTTCCTATAGAAATCATT +
Preference number: 2 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQSQGRQ*LPIEII
Trigger: AATGATTTCTATAGGAAGCCACTGCCTCCCCTGGCT...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR CAA 90 bp CAGCTCTTTCTTGTTTCTCTTGTTCCTCAAGAGCACGCTGCTCTGTaGTCTCTTTTTGGATGCGTTCATTTAAGGCATCAAAGTCTCTTG +
Preference number: 2 (lower is better)
Translates to: QLFLVSLVPQEHAAL*SLFGCVHLRHQSLL
Trigger: CAAGAGACTTTGATGCCTTAAATGAACGCATCCAAAAAGAGACAACAGAGCAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR TCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATATATGAGATCACATCATaGGCATCACTGTTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIYEITS*ASLLGR
Trigger: GCGACCTAACAGTGATGCTCATGATGTGATCTCATA...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATATTACCTCACTCAGTGTaGTTGCTAAGTCCCATGTAC +
Preference number: 2 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRILPHSV*LLSPMY
Trigger: GTACATGGGACTTAGCAACCACACTGAGTGAGGTAA...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CCA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATTACCTCACTCAGTGTaGTTGCTAAGTCCCATGTAC +
Preference number: 2 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQELPHSV*LLSPMY
Trigger: GTACATGGGACTTAGCAACCACACTGAGTGAGGTAA...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CCA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGACTCAGCCAGACCACTaGTTCCATCGAGTTCAGCCT +
Preference number: 2 (lower is better)
Translates to: LNAKYRILWMPFLSAREVTQPDH*FHRVQP
Trigger: AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGT...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp ATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTGACTTTACTCAGCCAGACCACTaGTTCCATCGAGTTCAGCCT +
Preference number: 2 (lower is better)
Translates to: IIMMCFTKRLKFWKSSDFTQPDH*FHRVQP
Trigger: AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGT...AAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp AAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTACTCAGCCAGACCACTaGTTCCATCGAGTTCAGCCT +
Preference number: 2 (lower is better)
Translates to: KCQIQNLMDAILKCKRSATQPDH*FHRVQP
Trigger: AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGT...AGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCCTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGC +
Preference number: 2 (lower is better)
Translates to: CQIQNLMDAILKCKRSAILERIR*FWVQLS
Trigger: GCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAACTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGC +
Preference number: 2 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQLERIR*FWVQLS
Trigger: GCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGAGCCAGGGGAGGCAGTaGCTTCCTATAGAAATCATT +
Preference number: 2 (lower is better)
Translates to: KELESPKRVTAASDGTRESQGRQ*LPIEII
Trigger: AATGATTTCTATAGGAAGCCACTGCCTCCCCTGGCT...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp CTCTCAGGAGCACAGTCATCTATATTAAGTGGTTCTACCCGGTGGTTCCTTTTCATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: LSGAQSSILSGSTRWFLFIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGTCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 2 (lower is better)
Translates to: LESPKRVTAASDGTREYRSEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 2 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQESEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp GTTTTCCTTCAGAAGTATGCTCATGAGTGGGGATGTATAAACCAGAGTCAACAGCCAAGTCAAAGATGGTaGCTTCAAACTTTCCTTGTC +
Preference number: 2 (lower is better)
Translates to: VFLQKYAHEWGCINQSQQPSQRW*LQTFLV
Trigger: GACAAGGAAAGTTTGAAGTCACCATCTTTGACTTGG...CTGTTGACTCTGGTTTATACATCCCCACTCATGAGCATACTTCTGAAGGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR TCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCGAACATGGTTCTATCTaGCACAGGCACTTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: CQIQNLMDAILKCKRSAIEHGSI*HRHLCS
Trigger: TGAGCACAAGTGCCTGTGTCAGATAGAACCATGTTC...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR GCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAAGAAGTCTCTGGACCTaGAGTAGGTTTTCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQRSLWT*SRFSSF
Trigger: AAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCT...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp ATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTGACTTTAGGTCCTCAAGAGCACGCTaGTCTGTTGTCTCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: IMMCFTKRLKFWKSSDFRSSRAR*SVVSFW
Trigger: CCAAAAAGAGACAACAGAGCAGCGTGCTCTTGAGGA...CCTAAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTTACCTCACTCAGTGTaGTTGCTAAGTCCCATGTAC +
Preference number: 2 (lower is better)
Translates to: KELESPKRVTAASDGTRELPHSV*LLSPMY
Trigger: GTACATGGGACTTAGCAACCACACTGAGTGAGGTAA...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CCA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAGGATTCGTTGGTTCTaGGTCCAACTCAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPRIRWF*VQLSQT
Trigger: GGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCT...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp CTTGCTGATATTAAGAGAACTCCTCCATACGTCTTGTTTATGAGATCACATCATCTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGC +
Preference number: 2 (lower is better)
Translates to: LADIKRTPPYVLFMRSHHLERIR*FWVQLS
Trigger: GCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG...ATGATGTGATCTCATAAACAAGACGTATGGAGGAGTTCTCTTAATATCAGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATCTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGC +
Preference number: 2 (lower is better)
Translates to: FQGMKELESPKRVTAASDLERIR*FWVQLS
Trigger: GCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGATTACAGATGCTATTaGCTGGAAAGGATTCGTTGG +
Preference number: 2 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQDYRCY*LERIRW
Trigger: CCAACGAATCCTTTCCAGCCAATAGCATCTGTAATC...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGTCATCTATATTAAGTaGTTCTACCCGGTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQVIYIK*FYPVVP
Trigger: AGGAACCACCGGGTAGAACCACTTAATATAGATGAC...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAAGTCATCTATATTAAGTaGTTCTACCCGGTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQEVIYIK*FYPVVP
Trigger: AGGAACCACCGGGTAGAACCACTTAATATAGATGAC...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAGCCAGGGGAGGCAGTaGCTTCCTATAGAAATCATT +
Preference number: 2 (lower is better)
Translates to: CQIQNLMDAILKCKRSAISQGRQ*LPIEII
Trigger: AATGATTTCTATAGGAAGCCACTGCCTCCCCTGGCT...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp GCTGATTCCAATGATGGCCGGTCTGTCTCATCTTCATTCTTTAACTGCTGTGTTATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: ADSNDGRSVSSSFFNCCVIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...AACACAGCAGTTAAAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp TTTCCCAGTTGTAAAACAGAAGTCTCTGGACCTGCAGTAGGTTTTCCAGTTTTTTCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 2 (lower is better)
Translates to: FPSCKTEVSGPAVGFPVFSEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAGCACCTTGATCTCTaGAAGTGTCTAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQEHLDL*KCLTFK
Trigger: TTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTC...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAGAGCACCTTGATCTCTaGAAGTGTCTAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIEHLDL*KCLTFK
Trigger: TTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTC...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCACCTTGATCTCTaGAAGTGTCTAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: LESPKRVTAASDGTREYREHLDL*KCLTFK
Trigger: TTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTC...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAAGAGTACAGGTGACCTaGTTATTAAAGTTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIRVQVT*LLKFSE
Trigger: CTCACTGAACTTTAATAATCAGGTCACCTGTACTCT...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAAGAGTACAGGTGACCTaGTTATTAAAGTTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQRVQVT*LLKFSE
Trigger: CTCACTGAACTTTAATAATCAGGTCACCTGTACTCT...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAAAGAGTACAGGTGACCTaGTTATTAAAGTTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQERVQVT*LLKFSE
Trigger: CTCACTGAACTTTAATAATCAGGTCACCTGTACTCT...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TCCTTCATTCTCAATGATTACAGATGCTATTGGCTGGAAAGGATTCGTTGGTTCCCAAGTCAAAGATGGTaGCTTCAAACTTTCCTTGTC +
Preference number: 2 (lower is better)
Translates to: SFILNDYRCYWLERIRWFPSQRW*LQTFLV
Trigger: GACAAGGAAAGTTTGAAGTCACCATCTTTGACTTGG...GAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR TCA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGATAGACATTCAATaGCATCAGCTTCTCCTAAAG +
Preference number: 2 (lower is better)
Translates to: LESPKRVTAASDGTREYREIDIQ*HQLLLK
Trigger: CTTTAGGAGAAGCTGATGTCATTGAATGTCTATCTC...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR TCA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAATATGAGATCACATCATaGGCATCACTGTTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQYEITS*ASLLGR
Trigger: GCGACCTAACAGTGATGCTCATGATGTGATCTCATA...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR GCA 90 bp ACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAATCTTAACAAGGTGGAGAAGTCTCTGGACCTaGAGTAGGTTTTCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: TCLLCQYKLPKAPILTRWRSLWT*SRFSSF
Trigger: AAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCT...CCACCTTGTTAAGATTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATTCCTCAAGAGCACGCTaGTCTGTTGTCTCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: FQGMKELESPKRVTAASDSSRAR*SVVSFW
Trigger: CCAAAAAGAGACAACAGAGCAGCGTGCTCTTGAGGA...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp TGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACTTACCTCACTCAGTGTaGTTGCTAAGTCCCATGTAC +
Preference number: 2 (lower is better)
Translates to: CYQILAHVCCVSTSYQKHLPHSV*LLSPMY
Trigger: GTACATGGGACTTAGCAACCACACTGAGTGAGGTAA...GTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCATTACCTCACTCAGTGTaGTTGCTAAGTCCCATGTAC +
Preference number: 2 (lower is better)
Translates to: AKYRILWMPFLSAREVLSLPHSV*LLSPMY
Trigger: GTACATGGGACTTAGCAACCACACTGAGTGAGGTAA...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CCA 90 bp ATAGAAATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTCTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGC +
Preference number: 2 (lower is better)
Translates to: IEIIMMCFTKRLKFWKSSLERIR*FWVQLS
Trigger: GCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG...ACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGATTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGGATTACAGATGCTATTaGCTGGAAAGGATTCGTTGG +
Preference number: 2 (lower is better)
Translates to: KELESPKRVTAASDGTREDYRCY*LERIRW
Trigger: CCAACGAATCCTTTCCAGCCAATAGCATCTGTAATC...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAAAGAGGCTCAAGTTTTaGAAGTCTAGTGACTTTAGG +
Preference number: 2 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQKRLKF*KSSDFR
Trigger: CCTAAAGTCACTAGACTTCCAAAACTTGAGCCTCTT...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAATCAAGTCAGGTCCTTaGGTATTAATCTTCTCACTA +
Preference number: 2 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQIKSGP*VLIFSL
Trigger: TAGTGAGAAGATTAATACTCAAGGACCTGACTTGAT...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: LESPKRVTAASDGTREYRIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACTCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 2 (lower is better)
Translates to: CYQILAHVCCVSTSYQKHSEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...GTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TTTTTACCATTAGCTGATTCCAATGATGGCCGGTCTGTCTCATCTTCATTCTTTTCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 2 (lower is better)
Translates to: FLPLADSNDGRSVSSSFFSEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...AAAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGCTAATGGTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCATCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 2 (lower is better)
Translates to: AKYRILWMPFLSAREVLSSEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp AAATCAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTTCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 2 (lower is better)
Translates to: KSNAFTSLSVVAKSHVQTSEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...AGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp GAAATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTGACTCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 2 (lower is better)
Translates to: EIIMMCFTKRLKFWKSSDSEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...GTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp ACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAATCTTAACAAGGTGGGAGCACCTTGATCTCTaGAAGTGTCTAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: TCLLCQYKLPKAPILTRWEHLDL*KCLTFK
Trigger: TTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTC...CCACCTTGTTAAGATTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TTTCCCAGTTGTAAAACAGAAGTCTCTGGACCTGCAGTAGGTTTTCCAGTTTTTGAGCACCTTGATCTCTaGAAGTGTCTAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: FPSCKTEVSGPAVGFPVFEHLDL*KCLTFK
Trigger: TTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTC...AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGAGAGTACAGGTGACCTaGTTATTAAAGTTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: KELESPKRVTAASDGTRERVQVT*LLKFSE
Trigger: CTCACTGAACTTTAATAATCAGGTCACCTGTACTCT...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATATTCCTTCATTCTCAATaGTTACAGATGCTATTGGCT +
Preference number: 2 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIFLHSQ*LQMLLA
Trigger: AGCCAATAGCATCTGTAATCATTGAGAATGAAGGAA...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGCATACGTCTTGTTTATaGGATCACATCATGAGCATC +
Preference number: 2 (lower is better)
Translates to: KELESPKRVTAASDGTREHTSCL*DHIMSI
Trigger: GATGCTCATGATGTGATCTCATAAACAAGACGTATG...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp GAAATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTGACATACCCCGAGATTGCTaGACATGGTTCACCAATATA +
Preference number: 2 (lower is better)
Translates to: EIIMMCFTKRLKFWKSSDIPRDC*TWFTNI
Trigger: TATATTGGTGAACCATGTTCAGCAATCTCGGGGTAT...GTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680414.1
3UTR-3UTR GCA 90 bp TGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACAGAAGTCTCTGGACCTaGAGTAGGTTTTCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: CYQILAHVCCVSTSYQKHRSLWT*SRFSSF
Trigger: AAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCT...GTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAAGATGCCATTCTTAAGTaGAAGAGAAGTGCTATCATT +
Preference number: 2 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQEDAILK*KRSAII
Trigger: AATGATAGCACTTCTCTTGCACTTAAGAATGGCATC...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAGATGCCATTCTTAAGTaGAAGAGAAGTGCTATCATT +
Preference number: 2 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIDAILK*KRSAII
Trigger: AATGATAGCACTTCTCTTGCACTTAAGAATGGCATC...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGCTCAATGATTACAGATaGTATTGGCTGGAAAGGATT +
Preference number: 2 (lower is better)
Translates to: LESPKRVTAASDGTREYRLNDYR*YWLERI
Trigger: AATCCTTTCCAGCCAATAGCATCTGTAATCATTGAG...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATCTGTTGTCTCTTTTTaGATGCGTTCATTTAAGGCA +
Preference number: 2 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQESVVSF*MRSFKA
Trigger: TGCCTTAAATGAACGCATCCAAAAAGAGACAACAGA...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR CCA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGTCTGTTGTCTCTTTTTaGATGCGTTCATTTAAGGCA +
Preference number: 2 (lower is better)
Translates to: LESPKRVTAASDGTREYRSVVSF*MRSFKA
Trigger: TGCCTTAAATGAACGCATCCAAAAAGAGACAACAGA...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR CCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAGTCATCTATATTAAGTaGTTCTACCCGGTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: AKYRILWMPFLSAREVLSVIYIK*FYPVVP
Trigger: AGGAACCACCGGGTAGAACCACTTAATATAGATGAC...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp TTTCCCAGTTGTAAAACAGAAGTCTCTGGACCTGCAGTAGGTTTTCCAGTTTTTATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: FPSCKTEVSGPAVGFPVFIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGTCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 2 (lower is better)
Translates to: LNAKYRILWMPFLSAREVSEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATTCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 2 (lower is better)
Translates to: FQGMKELESPKRVTAASDSEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp AAATCAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTGAGCACCTTGATCTCTaGAAGTGTCTAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: KSNAFTSLSVVAKSHVQTEHLDL*KCLTFK
Trigger: TTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTC...AGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAGAGCACCTTGATCTCTaGAAGTGTCTAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: AKYRILWMPFLSAREVLSEHLDL*KCLTFK
Trigger: TTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTC...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAAAGAGTACAGGTGACCTaGTTATTAAAGTTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQRVQVT*LLKFSE
Trigger: CTCACTGAACTTTAATAATCAGGTCACCTGTACTCT...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp AAATCAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTAGAGTACAGGTGACCTaGTTATTAAAGTTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: KSNAFTSLSVVAKSHVQTRVQVT*LLKFSE
Trigger: CTCACTGAACTTTAATAATCAGGTCACCTGTACTCT...AGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAAGAGTACAGGTGACCTaGTTATTAAAGTTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: AKYRILWMPFLSAREVLSRVQVT*LLKFSE
Trigger: CTCACTGAACTTTAATAATCAGGTCACCTGTACTCT...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATCCAAGTCAAAGATGGTaGCTTCAAACTTTCCTTGTC +
Preference number: 2 (lower is better)
Translates to: FQGMKELESPKRVTAASDPSQRW*LQTFLV
Trigger: GACAAGGAAAGTTTGAAGTCACCATCTTTGACTTGG...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR TCA 90 bp GAAATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTGACGAGATAGACATTCAATaGCATCAGCTTCTCCTAAAG +
Preference number: 2 (lower is better)
Translates to: EIIMMCFTKRLKFWKSSDEIDIQ*HQLLLK
Trigger: CTTTAGGAGAAGCTGATGTCATTGAATGTCTATCTC...GTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR TCA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAAGAGATAGACATTCAATaGCATCAGCTTCTCCTAAAG +
Preference number: 2 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQEIDIQ*HQLLLK
Trigger: CTTTAGGAGAAGCTGATGTCATTGAATGTCTATCTC...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR TCA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAATACCCCGAGATTGCTaGACATGGTTCTATCTGACA +
Preference number: 2 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPIPRDC*TWFYLT
Trigger: TGTCAGATAGAACCATGTTCAGCAATCTCGGGGTAT...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR GCA 90 bp AAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTAGAAGTCTCTGGACCTaGAGTAGGTTTTCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: KCQIQNLMDAILKCKRSARSLWT*SRFSSF
Trigger: AAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCT...AGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAAGATCTGAAATCAAATaGTTTTACCTCACTCAGTGT +
Preference number: 2 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIRSEIK*FYLTQC
Trigger: ACACTGAGTGAGGTAAAAGCATTTGATTTCAGATCT...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp TTTCCCAGTTGTAAAACAGAAGTCTCTGGACCTGCAGTAGGTTTTCCAGTTTTTCTCAATGATTACAGATaGTATTGGCTGGAAAGGATT +
Preference number: 2 (lower is better)
Translates to: FPSCKTEVSGPAVGFPVFLNDYR*YWLERI
Trigger: AATCCTTTCCAGCCAATAGCATCTGTAATCATTGAG...AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR GCA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATCTTCATTCTTTAACTaGTGTGTTAATGCCTCCTTA +
Preference number: 2 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQESSFFN*CVNASL
Trigger: TAAGGAGGCATTAACACAGCAGTTAAAGAATGAAGA...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAGCTGATTTCATGTACTaGTCATTGTGCTTCTTTTAT +
Preference number: 2 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIADFMY*SLCFFY
Trigger: ATAAAAGAAGCACAATGACCAGTACATGAAATCAGC...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CCA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAAGCTGATTTCATGTACTaGTCATTGTGCTTCTTTTAT +
Preference number: 2 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQEADFMY*SLCFFY
Trigger: ATAAAAGAAGCACAATGACCAGTACATGAAATCAGC...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CCA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGCTGATTTCATGTACTaGTCATTGTGCTTCTTTTAT +
Preference number: 2 (lower is better)
Translates to: LESPKRVTAASDGTREYRADFMY*SLCFFY
Trigger: ATAAAAGAAGCACAATGACCAGTACATGAAATCAGC...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CCA 90 bp CTGATTCCAATGATGGCCGGTCTGTCTCATCTTCATTCTTTAACTGCTGTGTTAGCTGATTTCATGTACTaGTCATTGTGCTTCTTTTAT +
Preference number: 2 (lower is better)
Translates to: LIPMMAGLSHLHSLTAVLADFMY*SLCFFY
Trigger: ATAAAAGAAGCACAATGACCAGTACATGAAATCAGC...TAACACAGCAGTTAAAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCATTACCTCACTCAGTGTaGTTGCTAAGTCCCATGTAC +
Preference number: 2 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPLPHSV*LLSPMY
Trigger: GTACATGGGACTTAGCAACCACACTGAGTGAGGTAA...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CCA 90 bp ACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAATCTTAACAAGGTGGTCTGTTGTCTCTTTTTaGATGCGTTCATTTAAGGCA +
Preference number: 2 (lower is better)
Translates to: TCLLCQYKLPKAPILTRWSVVSF*MRSFKA
Trigger: TGCCTTAAATGAACGCATCCAAAAAGAGACAACAGA...CCACCTTGTTAAGATTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR CCA 90 bp ATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTGACTTTAGTGGTTCTACCCGGTaGTTCCTTTTCATTCTTAGT +
Preference number: 2 (lower is better)
Translates to: IIMMCFTKRLKFWKSSDFSGSTR*FLFILS
Trigger: ACTAAGAATGAAAAGGAACCACCGGGTAGAACCACT...AAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp CTTGCTGATATTAAGAGAACTCCTCCATACGTCTTGTTTATGAGATCACATCATAGTGGTTCTACCCGGTaGTTCCTTTTCATTCTTAGT +
Preference number: 2 (lower is better)
Translates to: LADIKRTPPYVLFMRSHHSGSTR*FLFILS
Trigger: ACTAAGAATGAAAAGGAACCACCGGGTAGAACCACT...ATGATGTGATCTCATAAACAAGACGTATGGAGGAGTTCTCTTAATATCAGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp ATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTGACTTTGTCATCTATATTAAGTaGTTCTACCCGGTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: IIMMCFTKRLKFWKSSDFVIYIK*FYPVVP
Trigger: AGGAACCACCGGGTAGAACCACTTAATATAGATGAC...AAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: CQIQNLMDAILKCKRSAIIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: CYQILAHVCCVSTSYQKHIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...GTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TGGCTTCCTATAGAAATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: WLPIEIIMMCFTKRLKFWIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...CCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGATTTCTATAGGAAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp AAATCAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: KSNAFTSLSVVAKSHVQTIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...AGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp CTTGCTGATATTAAGAGAACTCCTCCATACGTCTTGTTTATGAGATCACATCATGAGCACCTTGATCTCTaGAAGTGTCTAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: LADIKRTPPYVLFMRSHHEHLDL*KCLTFK
Trigger: TTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTC...ATGATGTGATCTCATAAACAAGACGTATGGAGGAGTTCTCTTAATATCAGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGAGAGTACAGGTGACCTaGTTATTAAAGTTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: LNAKYRILWMPFLSAREVRVQVT*LLKFSE
Trigger: CTCACTGAACTTTAATAATCAGGTCACCTGTACTCT...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCTTCCTTCATTCTCAATaGTTACAGATGCTATTGGCT +
Preference number: 2 (lower is better)
Translates to: CQIQNLMDAILKCKRSAIFLHSQ*LQMLLA
Trigger: AGCCAATAGCATCTGTAATCATTGAGAATGAAGGAA...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR GCA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAGAAGTCTCTGGACCTaGAGTAGGTTTTCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPRSLWT*SRFSSF
Trigger: AAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCT...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCGATGCCATTCTTAAGTaGAAGAGAAGTGCTATCATT +
Preference number: 2 (lower is better)
Translates to: CQIQNLMDAILKCKRSAIDAILK*KRSAII
Trigger: AATGATAGCACTTCTCTTGCACTTAAGAATGGCATC...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp AAATCAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTGATGCCATTCTTAAGTaGAAGAGAAGTGCTATCATT +
Preference number: 2 (lower is better)
Translates to: KSNAFTSLSVVAKSHVQTDAILK*KRSAII
Trigger: AATGATAGCACTTCTCTTGCACTTAAGAATGGCATC...AGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAGATGCCATTCTTAAGTaGAAGAGAAGTGCTATCATT +
Preference number: 2 (lower is better)
Translates to: AKYRILWMPFLSAREVLSDAILK*KRSAII
Trigger: AATGATAGCACTTCTCTTGCACTTAAGAATGGCATC...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGAGATCTGAAATCAAATaGTTTTACCTCACTCAGTGT +
Preference number: 2 (lower is better)
Translates to: KELESPKRVTAASDGTRERSEIK*FYLTQC
Trigger: ACACTGAGTGAGGTAAAAGCATTTGATTTCAGATCT...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CCA 90 bp ATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTGACTTTAAGAGGCTCAAGTTTTaGAAGTCTAGTGACTTTAGG +
Preference number: 2 (lower is better)
Translates to: IIMMCFTKRLKFWKSSDFKRLKF*KSSDFR
Trigger: CCTAAAGTCACTAGACTTCCAAAACTTGAGCCTCTT...AAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR CAA 90 bp CGACATAAAATGTACTTAATGTTATCAGATACTAGCACATGTCTGTaGTGTCAGTACAAGTTACCAAAAGCACCAATCTTAACAAGGTGG +
Preference number: 2 (lower is better)
Translates to: RHKMYLMLSDTSTCL*CQYKLPKAPILTRW
Trigger: CCACCTTGTTAAGATTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTACATTTTATGTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGATCAAGTCAGGTCCTTaGGTATTAATCTTCTCACTA +
Preference number: 2 (lower is better)
Translates to: LNAKYRILWMPFLSAREVIKSGP*VLIFSL
Trigger: TAGTGAGAAGATTAATACTCAAGGACCTGACTTGAT...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp CTTGCTAATTTGGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTTTATCAAGTCAGGTCCTTaGGTATTAATCTTCTCACTA +
Preference number: 2 (lower is better)
Translates to: LANLVQMLISCTGHCASFIKSGP*VLIFSL
Trigger: TAGTGAGAAGATTAATACTCAAGGACCTGACTTGAT...AAAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACCAAATTAGCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000486562.2
ENST00000535334.5
ENST00000679404.1
ENST00000679587.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp AAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAAGTCAGGTCCTTaGGTATTAATCTTCTCACTA +
Preference number: 2 (lower is better)
Translates to: KCQIQNLMDAILKCKRSAIKSGP*VLIFSL
Trigger: TAGTGAGAAGATTAATACTCAAGGACCTGACTTGAT...AGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp AAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: KCQIQNLMDAILKCKRSAIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...AGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: LNAKYRILWMPFLSAREVIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAGAGCACCTTGATCTCTaGAAGTGTCTAACCTTTAAA +
Preference number: 2 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPEHLDL*KCLTFK
Trigger: TTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTC...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAGAGTACAGGTGACCTaGTTATTAAAGTTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPRVQVT*LLKFSE
Trigger: CTCACTGAACTTTAATAATCAGGTCACCTGTACTCT...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp AAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTTTCCTTCATTCTCAATaGTTACAGATGCTATTGGCT +
Preference number: 2 (lower is better)
Translates to: KCQIQNLMDAILKCKRSAFLHSQ*LQMLLA
Trigger: AGCCAATAGCATCTGTAATCATTGAGAATGAAGGAA...AGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR GCA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAAAGATCTGAAATCAAATaGTTTTACCTCACTCAGTGT +
Preference number: 2 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQRSEIK*FYLTQC
Trigger: ACACTGAGTGAGGTAAAAGCATTTGATTTCAGATCT...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAAGATCTGAAATCAAATaGTTTTACCTCACTCAGTGT +
Preference number: 2 (lower is better)
Translates to: AKYRILWMPFLSAREVLSRSEIK*FYLTQC
Trigger: ACACTGAGTGAGGTAAAAGCATTTGATTTCAGATCT...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp TGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACAGATCTGAAATCAAATaGTTTTACCTCACTCAGTGT +
Preference number: 2 (lower is better)
Translates to: CYQILAHVCCVSTSYQKHRSEIK*FYLTQC
Trigger: ACACTGAGTGAGGTAAAAGCATTTGATTTCAGATCT...GTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCATTGTCTCTTTTTGGATaGGTTCATTTAAGGCATCAA +
Preference number: 2 (lower is better)
Translates to: AKYRILWMPFLSAREVLSLSLFG*VHLRHQ
Trigger: TTGATGCCTTAAATGAACGCATCCAAAAAGAGACAA...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR GCA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAATTGTCTCTTTTTGGATaGGTTCATTTAAGGCATCAA +
Preference number: 2 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQLSLFG*VHLRHQ
Trigger: TTGATGCCTTAAATGAACGCATCCAAAAAGAGACAA...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR GCA 90 bp CTTGCTGATATTAAGAGAACTCCTCCATACGTCTTGTTTATGAGATCACATCATCTCAATGATTACAGATaGTATTGGCTGGAAAGGATT +
Preference number: 2 (lower is better)
Translates to: LADIKRTPPYVLFMRSHHLNDYR*YWLERI
Trigger: AATCCTTTCCAGCCAATAGCATCTGTAATCATTGAG...ATGATGTGATCTCATAAACAAGACGTATGGAGGAGTTCTCTTAATATCAGCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR GCA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATCTCAATGATTACAGATaGTATTGGCTGGAAAGGATT +
Preference number: 2 (lower is better)
Translates to: FQGMKELESPKRVTAASDLNDYR*YWLERI
Trigger: AATCCTTTCCAGCCAATAGCATCTGTAATCATTGAG...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR TCA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 2 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR TCA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCATCTAACATCATATGGTaGAATGCTATTTGTAGCTGC +
Preference number: 2 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPSNIIW*NAICSC
Trigger: GCAGCTACAAATAGCATTTCACCATATGATGTTAGA...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394222.8
ENST00000535334.5
3UTR-3UTR GCA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGAGATCTGAAATCAAATaGTTTTACCTCACTCAGTGT +
Preference number: 2 (lower is better)
Translates to: LNAKYRILWMPFLSAREVRSEIK*FYLTQC
Trigger: ACACTGAGTGAGGTAAAAGCATTTGATTTCAGATCT...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp AAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTTTGTCTCTTTTTGGATaGGTTCATTTAAGGCATCAA +
Preference number: 2 (lower is better)
Translates to: KCQIQNLMDAILKCKRSALSLFG*VHLRHQ
Trigger: TTGATGCCTTAAATGAACGCATCCAAAAAGAGACAA...AGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
3UTR-3UTR GCA 90 bp CTTGCTGATATTAAGAGAACTCCTCCATACGTCTTGTTTATGAGATCACATCATTCTTCATTCTTTAACTaGTGTGTTAATGCCTCCTTA +
Preference number: 2 (lower is better)
Translates to: LADIKRTPPYVLFMRSHHSSFFN*CVNASL
Trigger: TAAGGAGGCATTAACACAGCAGTTAAAGAATGAAGA...ATGATGTGATCTCATAAACAAGACGTATGGAGGAGTTCTCTTAATATCAGCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR GCA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAGATCTGAAATCAAATaGTTTTACCTCACTCAGTGT +
Preference number: 2 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPRSEIK*FYLTQC
Trigger: ACACTGAGTGAGGTAAAAGCATTTGATTTCAGATCT...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR GCA 90 bp ATAGAAATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTTCTTCATTCTTTAACTaGTGTGTTAATGCCTCCTTA +
Preference number: 2 (lower is better)
Translates to: IEIIMMCFTKRLKFWKSSSSFFN*CVNASL
Trigger: TAAGGAGGCATTAACACAGCAGTTAAAGAATGAAGA...ACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGATTTCTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CCA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAGCTGATTTCATGTACTaGTCATTGTGCTTCTTTTAT +
Preference number: 2 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPADFMY*SLCFFY
Trigger: ATAAAAGAAGCACAATGACCAGTACATGAAATCAGC...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp CACATCATGAGCATCACTGTTAGGTCGCTGTGGCACAGCCAGGGGAGGCAGTGGGCTGGAAAGGATTCGTaGGTTCTGGGTCCAACTCAG +
Preference number: 3 (lower is better)
Translates to: HIMSITVRSLWHSQGRQWAGKDS*VLGPTQ
Trigger: CTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGC...CCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTGCTGGAAAGGATTCGTaGGTTCTGGGTCCAACTCAG +
Preference number: 3 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGAGKDS*VLGPTQ
Trigger: CTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGC...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTTTCCATACCCCGAGATaGCTGAACATGGTTCTATCT +
Preference number: 3 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGFHTPR*LNMVLS
Trigger: AGATAGAACCATGTTCAGCAATCTCGGGGTATGGAA...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR CAA 90 bp TCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTTTCCATACCCCGAGATaGCTGAACATGGTTCTATCT +
Preference number: 3 (lower is better)
Translates to: SLVLGPTQPDHWFHRVQPFHTPR*LNMVLS
Trigger: AGATAGAACCATGTTCAGCAATCTCGGGGTATGGAA...AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR CCA 72 bp GATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTaGTTCCATCGAGTTCAGCCTGCTCCTGTTCATTTT +
Preference number: 3 (lower is better)
Translates to: DSLVLGPTQPDH*FHRVQPAPVHF
Trigger: AAAATGAACAGGAGCAGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR CCA 72 bp TACAGATGCTATTGGCTGGAAAGGATTCGTTGGTTCTaGGTCCAACTCAGCCAGACCACTGGTTCCATCGAG +
Preference number: 3 (lower is better)
Translates to: YRCYWLERIRWF*VQLSQTTGSIE
Trigger: CTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCATCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp CACATCATGAGCATCACTGTTAGGTCGCTGTGGCACAGCCAGGGGAGGCAGTGGAAAGTGCTGAGTCCATaGGCTCTTTTTGTAAAGTTT +
Preference number: 3 (lower is better)
Translates to: HIMSITVRSLWHSQGRQWKVLSP*ALFVKF
Trigger: AAACTTTACAAAAAGAGCCAATGGACTCAGCACTTT...CCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp TTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTCGTTCAGCTCTTTCTaGTTTCTCTTGTTCCTCAAG +
Preference number: 3 (lower is better)
Translates to: FVGSGSNSARPLVPSSSASFSSF*FLLFLK
Trigger: CTTGAGGAACAAGAGAAACAAGAAAGAGCTGAACGA...GGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR CCA 72 bp ACTGTTAGGTCGCTGTGGCACAGCCAGGGGAGGCAGTaGCTTCCTATAGAAATCATTATGATGTGTTTCACC +
Preference number: 3 (lower is better)
Translates to: TVRSLWHSQGRQ*LPIEIIMMCFT
Trigger: GGTGAAACACATCATAATGATTTCTATAGGAAGCCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp CTCTCAGGAGCACAGTCATCTATATTAAGTGGTTCTACCCGGTGGTTCCTTTTCGCTGGAAAGGATTCGTaGGTTCTGGGTCCAACTCAG +
Preference number: 3 (lower is better)
Translates to: LSGAQSSILSGSTRWFLFAGKDS*VLGPTQ
Trigger: CTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGC...GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR TCA 72 bp AACTCCTCCATACGTCTTGTTTATGAGATCACATCATaGGCATCACTGTTAGGTCGCTGTGGCACAGCCAGG +
Preference number: 3 (lower is better)
Translates to: NSSIRLVYEITS*ASLLGRCGTAR
Trigger: CCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTGATCTCATAAACAAGACGTATGGAGGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR CCA 72 bp AATGATTACAGATGCTATTGGCTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCC +
Preference number: 3 (lower is better)
Translates to: NDYRCYWLERIR*FWVQLSQTTGS
Trigger: GGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAAGCTGGAAAGGATTCGTaGGTTCTGGGTCCAACTCAG +
Preference number: 3 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQEAGKDS*VLGPTQ
Trigger: CTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGC...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp TGCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTTATCAAGTCAGGTCCTaGAGTATTAATCTTCTCACT +
Preference number: 3 (lower is better)
Translates to: CYWLERIRWFWVQLSQTTYQVRS*SINLLT
Trigger: AGTGAGAAGATTAATACTCAAGGACCTGACTTGATA...AGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp CTCTCAGGAGCACAGTCATCTATATTAAGTGGTTCTACCCGGTGGTTCCTTTTCGTGATTAACCTGGCCTaGTGTCTCTATTTGCTCATG +
Preference number: 3 (lower is better)
Translates to: LSGAQSSILSGSTRWFLFVINLA*CLYLLM
Trigger: CATGAGCAAATAGAGACACAAGGCCAGGTTAATCAC...GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp CTCTCAGGAGCACAGTCATCTATATTAAGTGGTTCTACCCGGTGGTTCCTTTTCCACCAGGGACCAGTTTaGCAGAAGACAATTTTTCCA +
Preference number: 3 (lower is better)
Translates to: LSGAQSSILSGSTRWFLFHQGPV*QKTIFP
Trigger: TGGAAAAATTGTCTTCTGCAAAACTGGTCCCTGGTG...GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680430.1
3UTR-3UTR CAA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAACCTCACTCAGTGTGGTaGCTAAGTCCCATGTACAAA +
Preference number: 3 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQEPHSVW*LSPMYK
Trigger: TTTGTACATGGGACTTAGCAACCACACTGAGTGAGG...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAGCTGGAAAGGATTCGTaGGTTCTGGGTCCAACTCAG +
Preference number: 3 (lower is better)
Translates to: AKYRILWMPFLSAREVLSAGKDS*VLGPTQ
Trigger: CTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGC...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCGCCTTGTGTCTCTATTaGCTCATGCTCCATTTTATG +
Preference number: 3 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSALCLY*LMLHFM
Trigger: CATAAAATGGAGCATGAGCAAATAGAGACACAAGGC...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR GCA 72 bp AACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTaGTCCTGTTCATTTTGTTTTCTTTCTTCTCGTAAT +
Preference number: 3 (lower is better)
Translates to: NSARPLVPSSSA*SCSFCFLSSRN
Trigger: ATTACGAGAAGAAAGAAAACAAAATGAACAGGAGCAGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGCCTCACTCAGTGTGGTaGCTAAGTCCCATGTACAAA +
Preference number: 3 (lower is better)
Translates to: KELESPKRVTAASDGTREPHSVW*LSPMYK
Trigger: TTTGTACATGGGACTTAGCAACCACACTGAGTGAGG...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAATTCCATACCCCGAGATaGCTGAACATGGTTCTATCT +
Preference number: 3 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQFHTPR*LNMVLS
Trigger: AGATAGAACCATGTTCAGCAATCTCGGGGTATGGAA...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR CAA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGTCTTTCTTGTTTCTCTaGTTCCTCAAGAGCACGCTG +
Preference number: 3 (lower is better)
Translates to: LESPKRVTAASDGTREYRSFLFL*FLKSTL
Trigger: CAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGA...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp CCTATAGAAATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTGCTGGAAAGGATTCGTaGGTTCTGGGTCCAACTCAG +
Preference number: 3 (lower is better)
Translates to: PIEIIMMCFTKRLKFWKSAGKDS*VLGPTQ
Trigger: CTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGC...AGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGATTTCTATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAAGTGATTAACCTGGCCTaGTGTCTCTATTTGCTCATG +
Preference number: 3 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQEVINLA*CLYLLM
Trigger: CATGAGCAAATAGAGACACAAGGCCAGGTTAATCAC...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCTATCAAGTCAGGTCCTaGAGTATTAATCTTCTCACT +
Preference number: 3 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSYQVRS*SINLLT
Trigger: AGTGAGAAGATTAATACTCAAGGACCTGACTTGATA...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp CTCTCAGGAGCACAGTCATCTATATTAAGTGGTTCTACCCGGTGGTTCCTTTTCAAAGTGCTGAGTCCATaGGCTCTTTTTGTAAAGTTT +
Preference number: 3 (lower is better)
Translates to: LSGAQSSILSGSTRWFLFKVLSP*ALFVKF
Trigger: AAACTTTACAAAAAGAGCCAATGGACTCAGCACTTT...GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAACTAGCACATGTCTGTaGTGTCAGTACAAGTTACCA +
Preference number: 3 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRITSTCL*CQYKLP
Trigger: TGGTAACTTGTACTGACACAACAGACATGTGCTAGT...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAAACTAGCACATGTCTGTaGTGTCAGTACAAGTTACCA +
Preference number: 3 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQETSTCL*CQYKLP
Trigger: TGGTAACTTGTACTGACACAACAGACATGTGCTAGT...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAACTAGCACATGTCTGTaGTGTCAGTACAAGTTACCA +
Preference number: 3 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQTSTCL*CQYKLP
Trigger: TGGTAACTTGTACTGACACAACAGACATGTGCTAGT...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp TGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCCTCACTCAGTGTGGTaGCTAAGTCCCATGTACAAA +
Preference number: 3 (lower is better)
Translates to: CYQILAHVCCVSTSYQKHPHSVW*LSPMYK
Trigger: TTTGTACATGGGACTTAGCAACCACACTGAGTGAGG...GTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAACCTCACTCAGTGTGGTaGCTAAGTCCCATGTACAAA +
Preference number: 3 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQPHSVW*LSPMYK
Trigger: TTTGTACATGGGACTTAGCAACCACACTGAGTGAGG...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTCTTTCTTGTTTCTCTaGTTCCTCAAGAGCACGCTG +
Preference number: 3 (lower is better)
Translates to: KELESPKRVTAASDGTRESFLFL*FLKSTL
Trigger: CAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGA...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGCCTTGTGTCTCTATTaGCTCATGCTCCATTTTATG +
Preference number: 3 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQALCLY*LMLHFM
Trigger: CATAAAATGGAGCATGAGCAAATAGAGACACAAGGC...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGGTGATTAACCTGGCCTaGTGTCTCTATTTGCTCATG +
Preference number: 3 (lower is better)
Translates to: KELESPKRVTAASDGTREVINLA*CLYLLM
Trigger: CATGAGCAAATAGAGACACAAGGCCAGGTTAATCAC...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR CCA 72 bp AAGTTTTCCTTCATTCTCAATGATTACAGATGCTATTaGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTC +
Preference number: 3 (lower is better)
Translates to: KFSFILNDYRCY*LERIRWFWVQL
Trigger: GAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAAGGAAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp TTCTCAATGATTACAGATGCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCTATCAAGTCAGGTCCTaGAGTATTAATCTTCTCACT +
Preference number: 3 (lower is better)
Translates to: FSMITDAIGWKGFVGSGSYQVRS*SINLLT
Trigger: AGTGAGAAGATTAATACTCAAGGACCTGACTTGATA...GGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCCTCACTCAGTGTGGTaGCTAAGTCCCATGTACAAA +
Preference number: 3 (lower is better)
Translates to: LNAKYRILWMPFLSAREVPHSVW*LSPMYK
Trigger: TTTGTACATGGGACTTAGCAACCACACTGAGTGAGG...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCTTCCATACCCCGAGATaGCTGAACATGGTTCTATCT +
Preference number: 3 (lower is better)
Translates to: CQIQNLMDAILKCKRSAIFHTPR*LNMVLS
Trigger: AGATAGAACCATGTTCAGCAATCTCGGGGTATGGAA...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
3UTR-3UTR CAA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCTCTTTCTTGTTTCTCTaGTTCCTCAAGAGCACGCTG +
Preference number: 3 (lower is better)
Translates to: CQIQNLMDAILKCKRSAISFLFL*FLKSTL
Trigger: CAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGA...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp GAAATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTGACTCTTTCTTGTTTCTCTaGTTCCTCAAGAGCACGCTG +
Preference number: 3 (lower is better)
Translates to: EIIMMCFTKRLKFWKSSDSFLFL*FLKSTL
Trigger: CAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGA...GTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGGCCTTGTGTCTCTATTaGCTCATGCTCCATTTTATG +
Preference number: 3 (lower is better)
Translates to: KELESPKRVTAASDGTREALCLY*LMLHFM
Trigger: CATAAAATGGAGCATGAGCAAATAGAGACACAAGGC...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAAGTGATTAACCTGGCCTaGTGTCTCTATTTGCTCATG +
Preference number: 3 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQVINLA*CLYLLM
Trigger: CATGAGCAAATAGAGACACAAGGCCAGGTTAATCAC...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAGTGATTAACCTGGCCTaGTGTCTCTATTTGCTCATG +
Preference number: 3 (lower is better)
Translates to: AKYRILWMPFLSAREVLSVINLA*CLYLLM
Trigger: CATGAGCAAATAGAGACACAAGGCCAGGTTAATCAC...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAAATGTCCCAGTTCACCTaGCTGATATTAAGAGAACTC +
Preference number: 3 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQMSQFT*LILREL
Trigger: GAGTTCTCTTAATATCAGCAAGGTGAACTGGGACAT...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATATATCAAGTCAGGTCCTaGAGTATTAATCTTCTCACT +
Preference number: 3 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIYQVRS*SINLLT
Trigger: AGTGAGAAGATTAATACTCAAGGACCTGACTTGATA...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGTATCAAGTCAGGTCCTaGAGTATTAATCTTCTCACT +
Preference number: 3 (lower is better)
Translates to: LESPKRVTAASDGTREYRYQVRS*SINLLT
Trigger: AGTGAGAAGATTAATACTCAAGGACCTGACTTGATA...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAAAAGTGCTGAGTCCATaGGCTCTTTTTGTAAAGTTT +
Preference number: 3 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQKVLSP*ALFVKF
Trigger: AAACTTTACAAAAAGAGCCAATGGACTCAGCACTTT...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAAAAGTGCTGAGTCCATaGGCTCTTTTTGTAAAGTTT +
Preference number: 3 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIKVLSP*ALFVKF
Trigger: AAACTTTACAAAAAGAGCCAATGGACTCAGCACTTT...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCACTAGCACATGTCTGTaGTGTCAGTACAAGTTACCA +
Preference number: 3 (lower is better)
Translates to: CQIQNLMDAILKCKRSAITSTCL*CQYKLP
Trigger: TGGTAACTTGTACTGACACAACAGACATGTGCTAGT...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp TGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACACTAGCACATGTCTGTaGTGTCAGTACAAGTTACCA +
Preference number: 3 (lower is better)
Translates to: CYQILAHVCCVSTSYQKHTSTCL*CQYKLP
Trigger: TGGTAACTTGTACTGACACAACAGACATGTGCTAGT...GTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGTCTTTCTTGTTTCTCTaGTTCCTCAAGAGCACGCTG +
Preference number: 3 (lower is better)
Translates to: LNAKYRILWMPFLSAREVSFLFL*FLKSTL
Trigger: CAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGA...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp TGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACGCCTTGTGTCTCTATTaGCTCATGCTCCATTTTATG +
Preference number: 3 (lower is better)
Translates to: CYQILAHVCCVSTSYQKHALCLY*LMLHFM
Trigger: CATAAAATGGAGCATGAGCAAATAGAGACACAAGGC...GTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp ATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTGACTTTAGGGCCTTGTGTCTCTATTaGCTCATGCTCCATTTTATG +
Preference number: 3 (lower is better)
Translates to: IMMCFTKRLKFWKSSDFRALCLY*LMLHFM
Trigger: CATAAAATGGAGCATGAGCAAATAGAGACACAAGGC...CCTAAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp ACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAATCTTAACAAGGTGGACTCCTCCATACGTCTaGTTTATGAGATCACATCAT +
Preference number: 3 (lower is better)
Translates to: TCLLCQYKLPKAPILTRWTPPYV*FMRSHH
Trigger: ATGATGTGATCTCATAAACAAGACGTATGGAGGAGT...CCACCTTGTTAAGATTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp GTTTTCCTTCAGAAGTATGCTCATGAGTGGGGATGTATAAACCAGAGTCAACAGTTCATGTACTGGTCATaGTGCTTCTTGCTGATATTA +
Preference number: 3 (lower is better)
Translates to: VFLQKYAHEWGCINQSQQFMYWS*CFLLIL
Trigger: TAATATCAGCAAGAAGCACAATGACCAGTACATGAA...CTGTTGACTCTGGTTTATACATCCCCACTCATGAGCATACTTCTGAAGGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471138.5
3UTR GCA 72 bp TCTTTCAAGTTTTCCTTCATTCTCAATGATTACAGATaGTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTC +
Preference number: 3 (lower is better)
Translates to: SFKFSFILNDYR*YWLERIRWFWV
Trigger: GACCCAGAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAAGGAAAACTTGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp AAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATGTCCCAGTTCACCTaGCTGATATTAAGAGAACTC +
Preference number: 3 (lower is better)
Translates to: KCQIQNLMDAILKCKRSAMSQFT*LILREL
Trigger: GAGTTCTCTTAATATCAGCAAGGTGAACTGGGACAT...AGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGATGTCCCAGTTCACCTaGCTGATATTAAGAGAACTC +
Preference number: 3 (lower is better)
Translates to: LNAKYRILWMPFLSAREVMSQFT*LILREL
Trigger: GAGTTCTCTTAATATCAGCAAGGTGAACTGGGACAT...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATATGTCCCAGTTCACCTaGCTGATATTAAGAGAACTC +
Preference number: 3 (lower is better)
Translates to: FQGMKELESPKRVTAASDMSQFT*LILREL
Trigger: GAGTTCTCTTAATATCAGCAAGGTGAACTGGGACAT...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp CTTGCTAATTTGGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTTTATGTCCCAGTTCACCTaGCTGATATTAAGAGAACTC +
Preference number: 3 (lower is better)
Translates to: LANLVQMLISCTGHCASFMSQFT*LILREL
Trigger: GAGTTCTCTTAATATCAGCAAGGTGAACTGGGACAT...AAAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACCAAATTAGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000486562.2
ENST00000535334.5
ENST00000679404.1
ENST00000679587.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATCAAGTCAGGTCCTaGAGTATTAATCTTCTCACT +
Preference number: 3 (lower is better)
Translates to: KELESPKRVTAASDGTREYQVRS*SINLLT
Trigger: AGTGAGAAGATTAATACTCAAGGACCTGACTTGATA...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp TTTCCCAGTTGTAAAACAGAAGTCTCTGGACCTGCAGTAGGTTTTCCAGTTTTTAAAGTGCTGAGTCCATaGGCTCTTTTTGTAAAGTTT +
Preference number: 3 (lower is better)
Translates to: FPSCKTEVSGPAVGFPVFKVLSP*ALFVKF
Trigger: AAACTTTACAAAAAGAGCCAATGGACTCAGCACTTT...AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGACTAGCACATGTCTGTaGTGTCAGTACAAGTTACCA +
Preference number: 3 (lower is better)
Translates to: LNAKYRILWMPFLSAREVTSTCL*CQYKLP
Trigger: TGGTAACTTGTACTGACACAACAGACATGTGCTAGT...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGTCGTTCAGCTCTTTCTaGTTTCTCTTGTTCCTCAAG +
Preference number: 3 (lower is better)
Translates to: LNAKYRILWMPFLSAREVSFSSF*FLLFLK
Trigger: CTTGAGGAACAAGAGAAACAAGAAAGAGCTGAACGA...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp TCTTTCAAGTTTTCCTTCATTCTCAATGATTACAGATGCTATTGGCTGGAAAGGTCGTTCAGCTCTTTCTaGTTTCTCTTGTTCCTCAAG +
Preference number: 3 (lower is better)
Translates to: SFKFSFILNDYRCYWLERSFSSF*FLLFLK
Trigger: CTTGAGGAACAAGAGAAACAAGAAAGAGCTGAACGA...CCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAAGGAAAACTTGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp CTTGCTGATATTAAGAGAACTCCTCCATACGTCTTGTTTATGAGATCACATCATGCCTTGTGTCTCTATTaGCTCATGCTCCATTTTATG +
Preference number: 3 (lower is better)
Translates to: LADIKRTPPYVLFMRSHHALCLY*LMLHFM
Trigger: CATAAAATGGAGCATGAGCAAATAGAGACACAAGGC...ATGATGTGATCTCATAAACAAGACGTATGGAGGAGTTCTCTTAATATCAGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCTATCAAGTCAGGTCCTaGAGTATTAATCTTCTCACT +
Preference number: 3 (lower is better)
Translates to: CQIQNLMDAILKCKRSAIYQVRS*SINLLT
Trigger: AGTGAGAAGATTAATACTCAAGGACCTGACTTGATA...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCATATCAAGTCAGGTCCTaGAGTATTAATCTTCTCACT +
Preference number: 3 (lower is better)
Translates to: AKYRILWMPFLSAREVLSYQVRS*SINLLT
Trigger: AGTGAGAAGATTAATACTCAAGGACCTGACTTGATA...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAAAGTGCTGAGTCCATaGGCTCTTTTTGTAAAGTTT +
Preference number: 3 (lower is better)
Translates to: CQIQNLMDAILKCKRSAIKVLSP*ALFVKF
Trigger: AAACTTTACAAAAAGAGCCAATGGACTCAGCACTTT...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAAAAGTGCTGAGTCCATaGGCTCTTTTTGTAAAGTTT +
Preference number: 3 (lower is better)
Translates to: AKYRILWMPFLSAREVLSKVLSP*ALFVKF
Trigger: AAACTTTACAAAAAGAGCCAATGGACTCAGCACTTT...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAAAAAGTGCTGAGTCCATaGGCTCTTTTTGTAAAGTTT +
Preference number: 3 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQKVLSP*ALFVKF
Trigger: AAACTTTACAAAAAGAGCCAATGGACTCAGCACTTT...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp ATAGAAATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTTCGTTCAGCTCTTTCTaGTTTCTCTTGTTCCTCAAG +
Preference number: 3 (lower is better)
Translates to: IEIIMMCFTKRLKFWKSSSFSSF*FLLFLK
Trigger: CTTGAGGAACAAGAGAAACAAGAAAGAGCTGAACGA...ACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGATTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATTATCAAGTCAGGTCCTaGAGTATTAATCTTCTCACT +
Preference number: 3 (lower is better)
Translates to: FQGMKELESPKRVTAASDYQVRS*SINLLT
Trigger: AGTGAGAAGATTAATACTCAAGGACCTGACTTGATA...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp CTTGCTGATATTAAGAGAACTCCTCCATACGTCTTGTTTATGAGATCACATCATTATCAAGTCAGGTCCTaGAGTATTAATCTTCTCACT +
Preference number: 3 (lower is better)
Translates to: LADIKRTPPYVLFMRSHHYQVRS*SINLLT
Trigger: AGTGAGAAGATTAATACTCAAGGACCTGACTTGATA...ATGATGTGATCTCATAAACAAGACGTATGGAGGAGTTCTCTTAATATCAGCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp CTTGCTAATTTGGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTTTTATCAAGTCAGGTCCTaGAGTATTAATCTTCTCACT +
Preference number: 3 (lower is better)
Translates to: LANLVQMLISCTGHCASFYQVRS*SINLLT
Trigger: AGTGAGAAGATTAATACTCAAGGACCTGACTTGATA...AAAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACCAAATTAGCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 21 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000486562.2
ENST00000535334.5
ENST00000679404.1
ENST00000679587.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp AAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTAAAGTGCTGAGTCCATaGGCTCTTTTTGTAAAGTTT +
Preference number: 3 (lower is better)
Translates to: KCQIQNLMDAILKCKRSAKVLSP*ALFVKF
Trigger: AAACTTTACAAAAAGAGCCAATGGACTCAGCACTTT...AGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATAAAGTGCTGAGTCCATaGGCTCTTTTTGTAAAGTTT +
Preference number: 3 (lower is better)
Translates to: FQGMKELESPKRVTAASDKVLSP*ALFVKF
Trigger: AAACTTTACAAAAAGAGCCAATGGACTCAGCACTTT...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp CCTATAGAAATCATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAAAGTGCTGAGTCCATaGGCTCTTTTTGTAAAGTTT +
Preference number: 3 (lower is better)
Translates to: PIEIIMMCFTKRLKFWKSKVLSP*ALFVKF
Trigger: AAACTTTACAAAAAGAGCCAATGGACTCAGCACTTT...AGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAATGATTTCTATAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAACTCCTCCATACGTCTaGTTTATGAGATCACATCAT +
Preference number: 3 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPTPPYV*FMRSHH
Trigger: ATGATGTGATCTCATAAACAAGACGTATGGAGGAGT...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
3UTR-3UTR CAA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCATATCAAGTCAGGTCCTaGAGTATTAATCTTCTCACT +
Preference number: 3 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPYQVRS*SINLLT
Trigger: AGTGAGAAGATTAATACTCAAGGACCTGACTTGATA...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR-3UTR CAA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGTGCTGAGTCCATaGGCTCTTTTTGTAAAGTTT +
Preference number: 3 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPKVLSP*ALFVKF
Trigger: AAACTTTACAAAAAGAGCCAATGGACTCAGCACTTT...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
3UTR CCA 72 bp CTAGAAGTTAGTCTAAATGCCAAATACAGAATCTTATaGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCA +
Preference number: 3 (lower is better)
Translates to: LEVSLNAKYRIL*MPFLSAREVLS
Trigger: TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAGACTAACTTCTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp GCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: AIGWKGFVGSGSNSARPLAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...CAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCAAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GWKGFVGSGSNSARPLVPRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...TGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCACCAACCTGGCCGGGCTaGGCGTGGTGGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: GFVGSGSNSARPLVPSSSPTWPG*AWWLMP
Trigger: AGGCATGAGCCACCACGCCCAGCCCGGCCAGGTTGG...TGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679654.1
CDS-3UTR CCA 90 bp TTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: FVGSGSNSARPLVPSSSAGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...GGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp TTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: FVGSGSNSARPLVPSSSANRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...GGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: LERIRWFWVQLSQTTGSIGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: AIGWKGFVGSGSNSARPLGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...CAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp AAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KGFVGSGSNSARPLVPSSRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...ACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp TCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SLVLGPTQPDHWFHRVQPTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp TTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FVGSGSNSARPLVPSSSATVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...GGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR GCA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTTGGGTCCGCGACGACTaGCCTCTTAGCCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGWVRDD*PLSQGT
Trigger: TGTTCCTTGGCTAAGAGGGCAGTCGTCGCGGACCCA...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp AAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: KGFVGSGSNSARPLVPSSGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...ACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp TGCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: CYWLERIRWFWVQLSQTTGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...AGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp CACATCATGAGCATCACTGTTAGGTCGCTGTGGCACAGCCAGGGGAGGCAGTGGCTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGC +
Preference number: 4 (lower is better)
Translates to: HIMSITVRSLWHSQGRQWLERIR*FWVQLS
Trigger: GCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG...CCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp TTCTCAATGATTACAGATGCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: FSMITDAIGWKGFVGSGSAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...GGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp GCTGATTCCAATGATGGCCGGTCTGTCTCATCTTCATTCTTTAACTGCTGTGTTGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: ADSNDGRSVSSSFFNCCVAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...AACACAGCAGTTAAAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp TTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCACTCAGCCAGACCACTaGTTCCATCGAGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FVGSGSNSARPLVPSSSATQPDH*FHRVQP
Trigger: AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGT...GGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTACTCAGCCAGACCACTaGTTCCATCGAGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGTQPDH*FHRVQP
Trigger: AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGT...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCAAGGATTCGTTGGTTCTaGGTCCAACTCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: GWKGFVGSGSNSARPLVPRIRWF*VQLSQT
Trigger: GGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCT...TGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp GTTTTCCTTCAGAAGTATGCTCATGAGTGGGGATGTATAAACCAGAGTCAACAGGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: VFLQKYAHEWGCINQSQQAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...CTGTTGACTCTGGTTTATACATCCCCACTCATGAGCATACTTCTGAAGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000471138.5
ENST00000535334.5
ENST00000679404.1
ENST00000679587.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCACTCAGCCAGACCACTaGTTCCATCGAGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LERIRWFWVQLSQTTGSITQPDH*FHRVQP
Trigger: AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGT...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCACTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGC +
Preference number: 4 (lower is better)
Translates to: GWKGFVGSGSNSARPLVPLERIR*FWVQLS
Trigger: GCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG...TGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GCTGATTCCAATGATGGCCGGTCTGTCTCATCTTCATTCTTTAACTGCTGTGTTAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ADSNDGRSVSSSFFNCCVRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...AACACAGCAGTTAAAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GTTTTCCTTCAGAAGTATGCTCATGAGTGGGGATGTATAAACCAGAGTCAACAGCCCATCTGGCCGGGCTaGGCGTGGTGGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: VFLQKYAHEWGCINQSQQPIWPG*AWWLMP
Trigger: AGGCATGAGCCACCACGCCCAGCCCGGCCAGATGGG...CTGTTGACTCTGGTTTATACATCCCCACTCATGAGCATACTTCTGAAGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680430.1
CDS-3UTR TCA 90 bp TTTCCCAGTTGTAAAACAGAAGTCTCTGGACCTGCAGTAGGTTTTCCAGTTTTTGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: FPSCKTEVSGPAVGFPVFAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp TTCTTTTTACCATTAGCTGATTCCAATGATGGCCGGTCTGTCTCATCTTCATTCGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: FFLPLADSNDGRSVSSSFAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...GAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGCTAATGGTAAAAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: KELESPKRVTAASDGTREAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp TTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCGAACATGGTTCTATCTaGCACAGGCACTTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: FVGSGSNSARPLVPSSSAEHGSI*HRHLCS
Trigger: TGAGCACAAGTGCCTGTGTCAGATAGAACCATGTTC...GGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
CDS-3UTR CCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAGCCTTGCTAACCGCGTaGGTCCGCGACGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIALLTA*VRDDCP
Trigger: AGGGCAGTCGTCGCGGACCCACGCGGTTAGCAAGGC...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAAGCCTTGCTAACCGCGTaGGTCCGCGACGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQEALLTA*VRDDCP
Trigger: AGGGCAGTCGTCGCGGACCCACGCGGTTAGCAAGGC...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GTTTTCCTTCAGAAGTATGCTCATGAGTGGGGATGTATAAACCAGAGTCAACAGGCCTTGCTAACCGCGTaGGTCCGCGACGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: VFLQKYAHEWGCINQSQQALLTA*VRDDCP
Trigger: AGGGCAGTCGTCGCGGACCCACGCGGTTAGCAAGGC...CTGTTGACTCTGGTTTATACATCCCCACTCATGAGCATACTTCTGAAGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000471138.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCCTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGC +
Preference number: 4 (lower is better)
Translates to: LERIRWFWVQLSQTTGSILERIR*FWVQLS
Trigger: GCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp CACATCATGAGCATCACTGTTAGGTCGCTGTGGCACAGCCAGGGGAGGCAGTGGGATTACAGATGCTATTaGCTGGAAAGGATTCGTTGG +
Preference number: 4 (lower is better)
Translates to: HIMSITVRSLWHSQGRQWDYRCY*LERIRW
Trigger: CCAACGAATCCTTTCCAGCCAATAGCATCTGTAATC...CCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp CACATCATGAGCATCACTGTTAGGTCGCTGTGGCACAGCCAGGGGAGGCAGTGGAGTGGTTCTACCCGGTaGTTCCTTTTCATTCTTAGT +
Preference number: 4 (lower is better)
Translates to: HIMSITVRSLWHSQGRQWSGSTR*FLFILS
Trigger: ACTAAGAATGAAAAGGAACCACCGGGTAGAACCACT...CCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LESPKRVTAASDGTREYRRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GTTTTCCTTCAGAAGTATGCTCATGAGTGGGGATGTATAAACCAGAGTCAACAGAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VFLQKYAHEWGCINQSQQRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...CTGTTGACTCTGGTTTATACATCCCCACTCATGAGCATACTTCTGAAGGAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 21 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000471138.5
ENST00000535334.5
ENST00000679404.1
ENST00000679587.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTAGCCAGGGGAGGCAGTaGCTTCCTATAGAAATCATT +
Preference number: 4 (lower is better)
Translates to: SLVLGPTQPDHWFHRVQPSQGRQ*LPIEII
Trigger: AATGATTTCTATAGGAAGCCACTGCCTCCCCTGGCT...AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp CTCTCAGGAGCACAGTCATCTATATTAAGTGGTTCTACCCGGTGGTTCCTTTTCACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LSGAQSSILSGSTRWFLFTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCAACTGGCCATCAGACTaGACATCCCGGGTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSNWPSD*TSRVAP
Trigger: AGGAGCGACCCGGGATGTTCAGTCTGATGGCCAGTT...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp GGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTGCTGATATTAAGAGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: GPNADFMYWSLCFLLILRAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...TCTTAATATCAGCAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471138.5
CDS-3UTR TCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: CQIQNLMDAILKCKRSAIAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: AKYRILWMPFLSAREVLSAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp AAATCAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: KSNAFTSLSVVAKSHVQTAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...AGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAAGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp TTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTATGAGATCACATCATaGGCATCACTGTTAGGTCGC +
Preference number: 4 (lower is better)
Translates to: FVGSGSNSARPLVPSSSAYEITS*ASLLGR
Trigger: GCGACCTAACAGTGATGCTCATGATGTGATCTCATA...GGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR GCA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCTGGGTCCGCGACGACTaGCCTCTTAGCCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSWVRDD*PLSQGT
Trigger: TGTTCCTTGGCTAAGAGGGCAGTCGTCGCGGACCCA...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR GCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCTCCTCAAGAGCACGCTaGTCTGTTGTCTCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: LERIRWFWVQLSQTTGSISSRAR*SVVSFW
Trigger: CCAAAAAGAGACAACAGAGCAGCGTGCTCTTGAGGA...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR GCA 90 bp GGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCATCCTTGGATTCCCTTTaGTGTTGCGGTTTTACCAGC +
Preference number: 4 (lower is better)
Translates to: GFVGSGSNSARPLVPSSSSLDSL*CCGFTS
Trigger: GCTGGTAAAACCGCAACAGCAAAGGGAATCCAAGGA...TGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
CDS-3UTR CCA 90 bp AAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTGAGACGCCCCTAAAGTaGATAAGTCGGGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: KGFVGSGSNSARPLVPSSETPLK*ISREEK
Trigger: CTTTTCCTCCCGACTTATCCACTTTAGGGGCGTCTC...ACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GTTTTCCTTCAGAAGTATGCTCATGAGTGGGGATGTATAAACCAGAGTCAACAGGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: VFLQKYAHEWGCINQSQQGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...CTGTTGACTCTGGTTTATACATCCCCACTCATGAGCATACTTCTGAAGGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 21 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000471138.5
ENST00000535334.5
ENST00000679404.1
ENST00000679587.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: LESPKRVTAASDGTREYRGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TCCTTCATTCTCAATGATTACAGATGCTATTGGCTGGAAAGGATTCGTTGGTTCAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SFILNDYRCYWLERIRWFRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...GAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp ACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAATCTTAACAAGGTGGAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TCLLCQYKLPKAPILTRWRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...CCACCTTGTTAAGATTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: LESPKRVTAASDGTREYRNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAAAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQENRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GTTTTCCTTCAGAAGTATGCTCATGAGTGGGGATGTATAAACCAGAGTCAACAGAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: VFLQKYAHEWGCINQSQQNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...CTGTTGACTCTGGTTTATACATCCCCACTCATGAGCATACTTCTGAAGGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 20 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000471138.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTTTACCTCACTCAGTGTaGTTGCTAAGTCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: SLVLGPTQPDHWFHRVQPLPHSV*LLSPMY
Trigger: GTACATGGGACTTAGCAACCACACTGAGTGAGGTAA...AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAAGGCTCTCAGCTCCGTaGCCCACAGGTGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQRLSAP*PTGAQQ
Trigger: TTGCTGGGCACCTGTGGGCCACGGAGCTGAGAGCCT...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679666.1
ENST00000679872.1
CDS-3UTR TCA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: FQGMKELESPKRVTAASDAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp AAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: KCQIQNLMDAILKCKRSAAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...AGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp CTTGCTAATTTGGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTTTGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: LANLVQMLISCTGHCASFAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...AAAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACCAAATTAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000486562.2
ENST00000535334.5
ENST00000679404.1
ENST00000679587.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGGCTCCCGCCACCGCTTaGACCAGCCGCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: LNAKYRILWMPFLSAREVAPATA*TSRSNW
Trigger: CCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGC...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp GCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGATACCCCGAGATTGCTaGACATGGTTCTATCTGACA +
Preference number: 4 (lower is better)
Translates to: AIGWKGFVGSGSNSARPLIPRDC*TWFYLT
Trigger: TGTCAGATAGAACCATGTTCAGCAATCTCGGGGTAT...CAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
CDS-3UTR TCA 90 bp GGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCATATGAGATCACATCATaGGCATCACTGTTAGGTCGC +
Preference number: 4 (lower is better)
Translates to: GFVGSGSNSARPLVPSSSYEITS*ASLLGR
Trigger: GCGACCTAACAGTGATGCTCATGATGTGATCTCATA...TGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp CACATCATGAGCATCACTGTTAGGTCGCTGTGGCACAGCCAGGGGAGGCAGTGGATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 4 (lower is better)
Translates to: HIMSITVRSLWHSQGRQWIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...CCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp CAGCCAGACCACTGGTTCCATCGAGTTCAGCCTGCTCCTGTTCATTTTGTTTTCATACCCCGAGATTGCTaGACATGGTTCCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: QPDHWFHRVQPAPVHFVFIPRDC*TWFLLG
Trigger: TCCAAGGAGGAACCATGTTCAGCAATCTCGGGGTAT...GAAAACAAAATGAACAGGAGCAGGCTGAACTCGATGGAACCAGTGGTCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460371.5
CDS-3UTR TCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCGAGGAGACTCCAACCTaGCAGGCTCCCGCCACCGCT +
Preference number: 4 (lower is better)
Translates to: CQIQNLMDAILKCKRSAIEETPT*QAPATA
Trigger: AGCGGTGGCGGGAGCCTGTCAGGTTGGAGTCTCCTC...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679607.1
ENST00000679666.1
ENST00000679872.1
ENST00000681655.1
CDS-3UTR TCA 90 bp TCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTATACCCCGAGATTGCTaGACATGGTTCACCAATATA +
Preference number: 4 (lower is better)
Translates to: SLVLGPTQPDHWFHRVQPIPRDC*TWFTNI
Trigger: TATATTGGTGAACCATGTTCAGCAATCTCGGGGTAT...AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679739.1
ENST00000680414.1
ENST00000681013.1
CDS-3UTR GCA 90 bp AAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCCTTGGATTCCCTTTaGTGTTGCGGTTTTACCAGC +
Preference number: 4 (lower is better)
Translates to: KGFVGSGSNSARPLVPSSSLDSL*CCGFTS
Trigger: GCTGGTAAAACCGCAACAGCAAAGGGAATCCAAGGA...ACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
CDS-3UTR CCA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAAGCCTTGCTAACCGCGTaGGTCCGCGACGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQALLTA*VRDDCP
Trigger: AGGGCAGTCGTCGCGGACCCACGCGGTTAGCAAGGC...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTGTCATCTATATTAAGTaGTTCTACCCGGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SLVLGPTQPDHWFHRVQPVIYIK*FYPVVP
Trigger: AGGAACCACCGGGTAGAACCACTTAATATAGATGAC...AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp ACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAATCTTAACAAGGTGGGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: TCLLCQYKLPKAPILTRWGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...CCACCTTGTTAAGATTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TTTCCCAGTTGTAAAACAGAAGTCTCTGGACCTGCAGTAGGTTTTCCAGTTTTTGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: FPSCKTEVSGPAVGFPVFGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: KELESPKRVTAASDGTREGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp AAATCAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KSNAFTSLSVVAKSHVQTRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...AGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CYQILAHVCCVSTSYQKHRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...GTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TTTCCCAGTTGTAAAACAGAAGTCTCTGGACCTGCAGTAGGTTTTCCAGTTTTTAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: FPSCKTEVSGPAVGFPVFNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp ACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAATCTTAACAAGGTGGAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: TCLLCQYKLPKAPILTRWNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...CCACCTTGTTAAGATTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GTTTTCCTTCAGAAGTATGCTCATGAGTGGGGATGTATAAACCAGAGTCAACAGACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VFLQKYAHEWGCINQSQQTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...CTGTTGACTCTGGTTTATACATCCCCACTCATGAGCATACTTCTGAAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 21 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000471138.5
ENST00000535334.5
ENST00000679404.1
ENST00000679587.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCATTACCTCACTCAGTGTaGTTGCTAAGTCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: GFVGSGSNSARPLVPSSSLPHSV*LLSPMY
Trigger: GTACATGGGACTTAGCAACCACACTGAGTGAGGTAA...TGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCTTACCTCACTCAGTGTaGTTGCTAAGTCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: LERIRWFWVQLSQTTGSILPHSV*LLSPMY
Trigger: GTACATGGGACTTAGCAACCACACTGAGTGAGGTAA...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp TTCTTTTTACCATTAGCTGATTCCAATGATGGCCGGTCTGTCTCATCTTCATTCGTATTCTGGCCGGGCTaGGCGTGGTGGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: FFLPLADSNDGRSVSSSFVFWPG*AWWLMP
Trigger: AGGCATGAGCCACCACGCCCAGCCCGGCCAGAATAC...GAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGCTAATGGTAAAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000680414.1
CDS-3UTR TCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAAACTGGCCATCAGACTaGACATCCCGGGTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRINWPSD*TSRVAP
Trigger: AGGAGCGACCCGGGATGTTCAGTCTGATGGCCAGTT...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp CAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGTTTATTTGCCAACCTaGCAGGCTCCCGCCACCGCT +
Preference number: 4 (lower is better)
Translates to: QMLLPHSVWLLSPMYKLQVYLPT*QAPATA
Trigger: AGCGGTGGCGGGAGCCTGTCAGGTTGGCAAATAAAC...TTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303097.11
CDS-3UTR TCA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTGAGATAGACATTCAATaGCATCAGCTTCTCCTAAAG +
Preference number: 4 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGEIDIQ*HQLLLK
Trigger: CTTTAGGAGAAGCTGATGTCATTGAATGTCTATCTC...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
CDS-3UTR TCA 90 bp GGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCAGAGATAGACATTCAATaGCATCAGCTTCTCCTAAAG +
Preference number: 4 (lower is better)
Translates to: GWKGFVGSGSNSARPLVPEIDIQ*HQLLLK
Trigger: CTTTAGGAGAAGCTGATGTCATTGAATGTCTATCTC...TGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
CDS-3UTR TCA 90 bp AAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTATGAGATCACATCATaGGCATCACTGTTAGGTCGC +
Preference number: 4 (lower is better)
Translates to: KGFVGSGSNSARPLVPSSYEITS*ASLLGR
Trigger: GCGACCTAACAGTGATGCTCATGATGTGATCTCATA...ACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTCATACGTCTTGTTTATaGGATCACATCATGAGCATC +
Preference number: 4 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGHTSCL*DHIMSI
Trigger: GATGCTCATGATGTGATCTCATAAACAAGACGTATG...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp TCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTCATACGTCTTGTTTATaGGATCACATCATGAGCATC +
Preference number: 4 (lower is better)
Translates to: SLVLGPTQPDHWFHRVQPHTSCL*DHIMSI
Trigger: GATGCTCATGATGTGATCTCATAAACAAGACGTATG...AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCTCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 4 (lower is better)
Translates to: LERIRWFWVQLSQTTGSISEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp GGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCATCAGAAGTATGCTCATaGGTGGGGATGTATAAACCA +
Preference number: 4 (lower is better)
Translates to: GFVGSGSNSARPLVPSSSSEVCS*VGMYKP
Trigger: TGGTTTATACATCCCCACTCATGAGCATACTTCTGA...TGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp TCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTAGAGTACAGGTGACCTaGTTATTAAAGTTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SLVLGPTQPDHWFHRVQPRVQVT*LLKFSE
Trigger: CTCACTGAACTTTAATAATCAGGTCACCTGTACTCT...AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp GCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGCCAAGTCAAAGATGGTaGCTTCAAACTTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: AIGWKGFVGSGSNSARPLPSQRW*LQTFLV
Trigger: GACAAGGAAAGTTTGAAGTCACCATCTTTGACTTGG...CAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
CDS-3UTR TCA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGAGGAGACTCCAACCTaGCAGGCTCCCGCCACCGCT +
Preference number: 4 (lower is better)
Translates to: FQGMKELESPKRVTAASDEETPT*QAPATA
Trigger: AGCGGTGGCGGGAGCCTGTCAGGTTGGAGTCTCCTC...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679607.1
ENST00000679666.1
ENST00000679872.1
ENST00000681655.1
CDS-3UTR TCA 90 bp CTTGCTAATTTGGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTTTGAGGAGACTCCAACCTaGCAGGCTCCCGCCACCGCT +
Preference number: 4 (lower is better)
Translates to: LANLVQMLISCTGHCASFEETPT*QAPATA
Trigger: AGCGGTGGCGGGAGCCTGTCAGGTTGGAGTCTCCTC...AAAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACCAAATTAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679607.1
ENST00000679666.1
ENST00000679872.1
ENST00000681655.1
CDS-3UTR TCA 90 bp TTTTTACCATTAGCTGATTCCAATGATGGCCGGTCTGTCTCATCTTCATTCTTTGCTGAACATGGTTCCTaGCAGGCTCCCGCCACCGCT +
Preference number: 4 (lower is better)
Translates to: FLPLADSNDGRSVSSSFFAEHGS*QAPATA
Trigger: AGCGGTGGCGGGAGCCTGTCAGGAACCATGTTCAGC...AAAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGCTAATGGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681247.1
CDS-3UTR GCA 90 bp CACATCATGAGCATCACTGTTAGGTCGCTGTGGCACAGCCAGGGGAGGCAGTGGTCTTCATTCTTTAACTaGTGTGTTAATGCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: HIMSITVRSLWHSQGRQWSSFFN*CVNASL
Trigger: TAAGGAGGCATTAACACAGCAGTTAAAGAATGAAGA...CCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR GCA 90 bp GGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAAGAAGTCTCTGGACCTaGAGTAGGTTTTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: GFVGSGSNSARPLVPSSSRSLWT*SRFSSF
Trigger: AAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCT...TGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR GCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCCAGGTGCCCAGCAAGTaGCCCTCCTGCCGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: CQIQNLMDAILKCKRSAIQVPSK*PSCRQD
Trigger: ATCTTGGCGGCAGGAGGGGCACTTGCTGGGCACCTG...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679666.1
ENST00000679872.1
CDS-3UTR GCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCACCGAGATCACGCCCCTaGACCCCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: AKYRILWMPFLSAREVLSPRSRP*TPVWAT
Trigger: TGTTGCCCAGACTGGGGTGCAGGGGCGTGATCTCGG...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679404.1
CDS-3UTR CCA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGCCTTGCTAACCGCGTaGGTCCGCGACGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: FQGMKELESPKRVTAASDALLTA*VRDDCP
Trigger: AGGGCAGTCGTCGCGGACCCACGCGGTTAGCAAGGC...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCAGGATTCGTTGGTTCTaGGTCCAACTCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSRIRWF*VQLSQT
Trigger: GGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCT...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GAGCTACATCTTCAGGGTATTCCTTTAGATCAGCAGCACCAGGGACCAGTTTTGCTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGC +
Preference number: 4 (lower is better)
Translates to: ELHLQGIPLDQQHQGPVLLERIR*FWVQLS
Trigger: GCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG...CAAAACTGGTCCCTGGTGCTGCTGATCTAAAGGAATACCCTGAAGATGTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680430.1
CDS-3UTR CCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCAGTGGTTCTACCCGGTaGTTCCTTTTCATTCTTAGT +
Preference number: 4 (lower is better)
Translates to: LERIRWFWVQLSQTTGSISGSTR*FLFILS
Trigger: ACTAAGAATGAAAAGGAACCACCGGGTAGAACCACT...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAAGTGGTTCTACCCGGTaGTTCCTTTTCATTCTTAGT +
Preference number: 4 (lower is better)
Translates to: GFVGSGSNSARPLVPSSSSGSTR*FLFILS
Trigger: ACTAAGAATGAAAAGGAACCACCGGGTAGAACCACT...TGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp TATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAAGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: YQILAHVCCVSTSYQKHQGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...TTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: AKYRILWMPFLSAREVLSGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...TGATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTGCTGATATTAAGAGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: GPNADFMYWSLCFLLILRGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...TCTTAATATCAGCAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471138.5
CDS-3UTR CCA 90 bp CTTGCTAATTTGGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTTTAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LANLVQMLISCTGHCASFRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...AAAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACCAAATTAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 21 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000486562.2
ENST00000535334.5
ENST00000679404.1
ENST00000679587.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FQGMKELESPKRVTAASDRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp AAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KCQIQNLMDAILKCKRSARRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...AGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TTTTTACCATTAGCTGATTCCAATGATGGCCGGTCTGTCTCATCTTCATTCTTTAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: FLPLADSNDGRSVSSSFFNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...AAAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGCTAATGGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp GGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTGCTGATATTAAGAAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: GPNADFMYWSLCFLLILRNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...TCTTAATATCAGCAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471138.5
CDS-3UTR CCA 90 bp AAATCAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: KSNAFTSLSVVAKSHVQTNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...AGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: CYQILAHVCCVSTSYQKHNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...GTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KELESPKRVTAASDGTRETVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp ACTTGTCAATTTTCTTTCCATACCCCGAGATTGCTGAACATGGTTCTATCTGACACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TCQFSFHTPRLLNMVLSDTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...GTCAGATAGAACCATGTTCAGCAATCTCGGGGTATGGAAAGAAAATTGACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000679654.1
ENST00000680430.1
CDS-3UTR CCA 90 bp ACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCAATCTTAACAAGGTGGACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TCLLCQYKLPKAPILTRWTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...CCACCTTGTTAAGATTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TTTCCCAGTTGTAAAACAGAAGTCTCTGGACCTGCAGTAGGTTTTCCAGTTTTTACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FPSCKTEVSGPAVGFPVFTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp AAATCAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTGTATTCTGGCCGGGCTaGGCGTGGTGGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: KSNAFTSLSVVAKSHVQTVFWPG*AWWLMP
Trigger: AGGCATGAGCCACCACGCCCAGCCCGGCCAGAATAC...AGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000680414.1
CDS-3UTR TCA 90 bp TTTCCCAGTTGTAAAACAGAAGTCTCTGGACCTGCAGTAGGTTTTCCAGTTTTTAACTGGCCATCAGACTaGACATCCCGGGTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: FPSCKTEVSGPAVGFPVFNWPSD*TSRVAP
Trigger: AGGAGCGACCCGGGATGTTCAGTCTGATGGCCAGTT...AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 17 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGCACCTTGATCTCTaGAAGTGTCTAACCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LERIRWFWVQLSQTTGSIEHLDL*KCLTFK
Trigger: TTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTC...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp GCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGAGAGTACAGGTGACCTaGTTATTAAAGTTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: AIGWKGFVGSGSNSARPLRVQVT*LLKFSE
Trigger: CTCACTGAACTTTAATAATCAGGTCACCTGTACTCT...CAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp TGCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTATACCCCGAGATTGCTaGACATGGTTCACCAATATA +
Preference number: 4 (lower is better)
Translates to: CYWLERIRWFWVQLSQTTIPRDC*TWFTNI
Trigger: TATATTGGTGAACCATGTTCAGCAATCTCGGGGTAT...AGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679739.1
ENST00000680414.1
ENST00000681013.1
CDS-3UTR GCA 90 bp TTTCCCAGTTGTAAAACAGAAGTCTCTGGACCTGCAGTAGGTTTTCCAGTTTTTTGGGTCCGCGACGACTaGCCTCTTAGCCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: FPSCKTEVSGPAVGFPVFWVRDD*PLSQGT
Trigger: TGTTCCTTGGCTAAGAGGGCAGTCGTCGCGGACCCA...AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 16 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR GCA 90 bp AAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTGGGTCCGCGACGACTaGCCTCTTAGCCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: KELESPKRVTAASDGTREWVRDD*PLSQGT
Trigger: TGTTCCTTGGCTAAGAGGGCAGTCGTCGCGGACCCA...CTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR GCA 90 bp AAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTAGAAGTCTCTGGACCTaGAGTAGGTTTTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: KGFVGSGSNSARPLVPSSRSLWT*SRFSSF
Trigger: AAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCT...ACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCGAGACGCCCCTAAAGTaGATAAGTCGGGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSETPLK*ISREEK
Trigger: CTTTTCCTCCCGACTTATCCACTTTAGGGGCGTCTC...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TTCTCAATGATTACAGATGCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCAGGATTCGTTGGTTCTaGGTCCAACTCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: FSMITDAIGWKGFVGSGSRIRWF*VQLSQT
Trigger: GGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCT...GGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp CTCTCAGGAGCACAGTCATCTATATTAAGTGGTTCTACCCGGTGGTTCCTTTTCCTGGAAAGGATTCGTTaGTTCTGGGTCCAACTCAGC +
Preference number: 4 (lower is better)
Translates to: LSGAQSSILSGSTRWFLFLERIR*FWVQLS
Trigger: GCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG...GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp CTTGCTAATTTGGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTTTGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: LANLVQMLISCTGHCASFGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...AAAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACCAAATTAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 21 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000486562.2
ENST00000535334.5
ENST00000679404.1
ENST00000679587.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp AAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: KCQIQNLMDAILKCKRSAGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...AGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GTTTTCTTTCTTCTCGTAATTTTCGCACTCGTTCAGCTCTTTCTTGTTTCTCTTGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: VFFLLVIFALVQLFLVSLGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...AAGAGAAACAAGAAAGAGCTGAACGAGTGCGAAAATTACGAGAAGAAAGAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAGGAGGGGGTGGGGGTaGCGTTGGACTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPRRGWG*RWTLRS
Trigger: GCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCT...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: FQGMKELESPKRVTAASDNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp AAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: KCQIQNLMDAILKCKRSANRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...AGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GTTTTCTTTCTTCTCGTAATTTTCGCACTCGTTCAGCTCTTTCTTGTTTCTCTTAACAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: VFFLLVIFALVQLFLVSLNRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGTT...AAGAGAAACAAGAAAGAGCTGAACGAGTGCGAAAATTACGAGAAGAAAGAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CQIQNLMDAILKCKRSAITVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGGTATTCTGGCCGGGCTaGGCGTGGTGGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: LNAKYRILWMPFLSAREVVFWPG*AWWLMP
Trigger: AGGCATGAGCCACCACGCCCAGCCCGGCCAGAATAC...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335438.7
ENST00000679601.1
ENST00000680414.1
CDS-3UTR CCA 90 bp CTTGCTAATTTGGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTTTATCAGGAGGAGGGGGTaGGGGTGGCGTTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: LANLVQMLISCTGHCASFIRRRG*GWRWTL
Trigger: GAGAGTCCAACGCCACCCCCACCCCCTCCTCCTGAT...AAAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACCAAATTAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000486562.2
ENST00000679587.1
CDS-3UTR CCA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCAAGCCAGGTCAGGCCTaGTGGTTCATTCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSKPGQA*WFIPVI
Trigger: GATTACAGGAATGAACCACCAGGCCTGACCTGGCTT...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679404.1
CDS-3UTR CCA 90 bp TGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAAAAGCACCCCTGCACCCCAGTCTaGGCAACAGAGCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: CYQILAHVCCVSTSYQKHPCTPV*ATEQDC
Trigger: ACAGTCCTGCTCTGTTGCCCAGACTGGGGTGCAGGG...GTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679404.1
CDS-3UTR TCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCAACTGGCCATCAGACTaGACATCCCGGGTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: CQIQNLMDAILKCKRSAINWPSD*TSRVAP
Trigger: AGGAGCGACCCGGGATGTTCAGTCTGATGGCCAGTT...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR TCA 90 bp GGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTGCTGATATTAAGAAACTGGCCATCAGACTaGACATCCCGGGTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPNADFMYWSLCFLLILRNWPSD*TSRVAP
Trigger: AGGAGCGACCCGGGATGTTCAGTCTGATGGCCAGTT...TCTTAATATCAGCAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471138.5
CDS-3UTR TCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCTTCCTTCATTCTCAATaGTTACAGATGCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: LERIRWFWVQLSQTTGSIFLHSQ*LQMLLA
Trigger: AGCCAATAGCATCTGTAATCATTGAGAATGAAGGAA...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp GGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCATTCCTTCATTCTCAATaGTTACAGATGCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: GFVGSGSNSARPLVPSSSFLHSQ*LQMLLA
Trigger: AGCCAATAGCATCTGTAATCATTGAGAATGAAGGAA...TGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp TGCTATTGGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTCATACGTCTTGTTTATaGGATCACATCATGAGCATC +
Preference number: 4 (lower is better)
Translates to: CYWLERIRWFWVQLSQTTHTSCL*DHIMSI
Trigger: GATGCTCATGATGTGATCTCATAAACAAGACGTATG...AGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCCAATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp GGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAATTTGGTCCAAATGCTaGTTTCATGTACTGGTCATT +
Preference number: 4 (lower is better)
Translates to: GFVGSGSNSARPLVPSSSIWSKC*FHVLVI
Trigger: AATGACCAGTACATGAAATCAGCATTTGGACCAAAT...TGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp AAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTGAGCACCTTGATCTCTaGAAGTGTCTAACCTTTAAA +
Preference number: 4 (lower is better)
Translates to: KGFVGSGSNSARPLVPSSEHLDL*KCLTFK
Trigger: TTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTC...ACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR TCA 90 bp TGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGCTATCATCTTCAGGGTATTCTaGCAGGCTCCCGCCACCGCT +
Preference number: 4 (lower is better)
Translates to: CQIQNLMDAILKCKRSAIIFRVF*QAPATA
Trigger: AGCGGTGGCGGGAGCCTGTCAGAATACCCTGAAGAT...GATAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535334.5
ENST00000679739.1
CDS-3UTR TCA 90 bp ATTATGATGTGTTTCACCAAGAGGCTCAAGTTTTGGAAGTCTAGTGACTTTAGGATCTTCAGGGTATTCTaGCAGGCTCCCGCCACCGCT +
Preference number: 4 (lower is better)
Translates to: IMMCFTKRLKFWKSSDFRIFRVF*QAPATA
Trigger: AGCGGTGGCGGGAGCCTGTCAGAATACCCTGAAGAT...CCTAAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679739.1
CDS-3UTR GCA 90 bp GGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTGCTGATATTAAGATGGGTCCGCGACGACTaGCCTCTTAGCCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: GPNADFMYWSLCFLLILRWVRDD*PLSQGT
Trigger: TGTTCCTTGGCTAAGAGGGCAGTCGTCGCGGACCCA...TCTTAATATCAGCAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471138.5
CDS-3UTR GCA 90 bp GGGGGTGGGGGTGGCGTTGGACTCTCAGGAGCACAGTCATCTATATTAAGTGGTTTGTCTCTTTTTGGATaGGTTCATTTAAGGCATCAA +
Preference number: 4 (lower is better)
Translates to: GGGGGVGLSGAQSSILSGLSLFG*VHLRHQ
Trigger: TTGATGCCTTAAATGAACGCATCCAAAAAGAGACAA...ACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR GCA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCTCCTCAAGAGCACGCTaGTCTGTTGTCTCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSSSRAR*SVVSFW
Trigger: CCAAAAAGAGACAACAGAGCAGCGTGCTCTTGAGGA...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR GCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGATGCCATTCTTAAGTaGAAGAGAAGTGCTATCATT +
Preference number: 4 (lower is better)
Translates to: LERIRWFWVQLSQTTGSIDAILK*KRSAII
Trigger: AATGATAGCACTTCTCTTGCACTTAAGAATGGCATC...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR GCA 90 bp GGCTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCAAGATCTGAAATCAAATaGTTTTACCTCACTCAGTGT +
Preference number: 4 (lower is better)
Translates to: GWKGFVGSGSNSARPLVPRSEIK*FYLTQC
Trigger: ACACTGAGTGAGGTAAAAGCATTTGATTTCAGATCT...TGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR GCA 90 bp CTCTCAGGAGCACAGTCATCTATATTAAGTGGTTCTACCCGGTGGTTCCTTTTCTCCTTGGATTCCCTTTaGTGTTGCGGTTTTACCAGC +
Preference number: 4 (lower is better)
Translates to: LSGAQSSILSGSTRWFLFSLDSL*CCGFTS
Trigger: GCTGGTAAAACCGCAACAGCAAAGGGAATCCAAGGA...GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
CDS-3UTR GCA 90 bp AATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGGAGCTCCTTGGATTCCCTTTaGTGTTGCGGTTTTACCAGC +
Preference number: 4 (lower is better)
Translates to: NHLKESLQLLMEQGSIGSSLDSL*CCGFTS
Trigger: GCTGGTAAAACCGCAACAGCAAAGGGAATCCAAGGA...GCTCCCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000679404.1
ENST00000679601.1
ENST00000679654.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR GCA 90 bp AAATCAAATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTGCAGGAGGCAGAGGTTaGAATGAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: KSNAFTSLSVVAKSHVQTAGGRG*NEPRSR
Trigger: GCGTGATCTCGGCTCATTGCAACCTCTGCCTCCTGC...AGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679404.1
CDS-3UTR CCA 90 bp GCTGATTCCAATGATGGCCGGTCTGTCTCATCTTCATTCTTTAACTGCTGTGTTGAGACGCCCCTAAAGTaGATAAGTCGGGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: ADSNDGRSVSSSFFNCCVETPLK*ISREEK
Trigger: CTTTTCCTCCCGACTTATCCACTTTAGGGGCGTCTC...AACACAGCAGTTAAAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp CTGGAAAGGATTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCTCTGTTGTCTCTTTTTaGATGCGTTCATTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: LERIRWFWVQLSQTTGSISVVSF*MRSFKA
Trigger: TGCCTTAAATGAACGCATCCAAAAAGAGACAACAGA...GATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCTTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp ATGCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAAACTCAGCCAGACCACTaGTTCCATCGAGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: MLLPHSVWLLSPMYKLQETQPDH*FHRVQP
Trigger: AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGT...TTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GTTTTCCTTCAGAAGTATGCTCATGAGTGGGGATGTATAAACCAGAGTCAACAGACTCAGCCAGACCACTaGTTCCATCGAGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: VFLQKYAHEWGCINQSQQTQPDH*FHRVQP
Trigger: AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGT...CTGTTGACTCTGGTTTATACATCCCCACTCATGAGCATACTTCTGAAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000471138.5
ENST00000535334.5
ENST00000679404.1
ENST00000679587.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAACTCAGCCAGACCACTaGTTCCATCGAGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRITQPDH*FHRVQP
Trigger: AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGT...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp GCTTTTACCTCACTCAGTGTGGTTGCTAAGTCCCATGTACAAACTCCAAGAATAAGGATTCGTTGGTTCTaGGTCCAACTCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: AFTSLSVVAKSHVQTPRIRIRWF*VQLSQT
Trigger: GGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCT...TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATGGAACAAGGGAGTATAGGAGGATTCGTTGGTTCTaGGTCCAACTCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: LESPKRVTAASDGTREYRRIRWF*VQLSQT
Trigger: GGTCTGGCTGAGTTGGACCCAGAACCAACGAATCCT...CCTATACTCCCTTGTTCCATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp CAGCCAGACCACTGGTTCCATCGAGTTCAGCCTGCTCCTGTTCATTTTGTTTTCGATTACAGATGCTATTaGCTGGAAAGGATTCGTTGG +
Preference number: 4 (lower is better)
Translates to: QPDHWFHRVQPAPVHFVFDYRCY*LERIRW
Trigger: CCAACGAATCCTTTCCAGCCAATAGCATCTGTAATC...GAAAACAAAATGAACAGGAGCAGGCTGAACTCGATGGAACCAGTGGTCTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp TACTTAATGTTATCAGATACTAGCACATGTCTGTTGTGTCAGTACAAGTTACCAGGGTGGGGGTGGCGTTaGACTCTCAGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: YLMLSDTSTCLLCQYKLPGWGWR*TLRSTV
Trigger: GACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCC...TGGTAACTTGTACTGACACAACAGACATGTGCTAGTATCTGATAACATTAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp CTTGCTAATTTGGTCCAAATGCTGATTTCATGTACTGGTCATTGTGCTTCTTTTACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LANLVQMLISCTGHCASFTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...AAAAGAAGCACAATGACCAGTACATGAAATCAGCATTTGGACCAAATTAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000486562.2
ENST00000535334.5
ENST00000679404.1
ENST00000679587.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679657.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TTTCAAGGCATGAAAGAATTAGAATCACCTAAAAGAGTCACTGCAGCTTCTGATACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FQGMKELESPKRVTAASDTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...ATCAGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp CTAAATGCCAAATACAGAATCTTATGGATGCCATTCTTAAGTGCAAGAGAAGTGACTGTTAGGTCGCTGTaGCACAGCCAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LNAKYRILWMPFLSAREVTVRSL*HSQGRQ
Trigger: CTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGT...CACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000303097.11
ENST00000335438.7
ENST00000394222.8
ENST00000460371.5
ENST00000535334.5
ENST00000679404.1
ENST00000679601.1
ENST00000679607.1
ENST00000679654.1
ENST00000679666.1
ENST00000679739.1
ENST00000679872.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
ENST00000681380.1
ENST00000681655.1
CDS-3UTR CCA 90 bp TCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCTGCTGATTTCATGTACTaGTCATTGTGCTTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: SLVLGPTQPDHWFHRVQPADFMY*SLCFFY
Trigger: ATAAAAGAAGCACAATGACCAGTACATGAAATCAGC...AGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247.1
CDS-3UTR CCA 90 bp TTCGTTGGTTCTGGGTCCAACTCAGCCAGACCACTGGTTCCATCGAGTTCAGCCGCTGATTTCATGTACTaGTCATTGTGCTTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: FVGSGSNSARPLVPSSSAADFMY*SLCFFY
Trigger: ATAAAAGAAGCACAATGACCAGTACATGAAATCAGC...GGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335438.7
ENST00000460371.5
ENST00000679601.1
ENST00000679654.1
ENST00000679739.1
ENST00000680414.1
ENST00000680430.1
ENST00000681013.1
ENST00000681247