RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARL10 (Homo sapiens)

Ensembl gene IDs: ENSG00000175414

Ensembl transcript IDs: ENST00000310389.6, ENST00000503175.1, ENST00000507151.1, ENST00000514533.1

Found 449 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGCTGCTGGTGCGGTaGTCAGCGCGATGCCCAAGGCCAAGGGCAAAACCCGGAGGCAGA +
Preference number: 1 (lower is better)
Translates to: RGLRDRGSVFELLVR*SARCPRPRAKPGGR
Trigger: TCTGCCTCCGGGTTTTGCCCTTGGCCTTGGGCATCGCGCTGACCACCGCACCAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503175.1
3UTR TCA 90 bp GAAGGAGTTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTaGGCTGCTGGTGCGGTGGTCAGCGCGATGCCCAAGGCCAAGGGC +
Preference number: 1 (lower is better)
Translates to: EGVCYTRSERQRQRV*AAGAVVSAMPKAKG
Trigger: GCCCTTGGCCTTGGGCATCGCGCTGACCACCGCACCAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
3UTR TCA 90 bp GGGAAATGCTGCCATGTGGCTCTTGCCCCAGGCCCAGTCTGGCAATaGAGCAGCAGCAGTACAACTATGGTCTTGACAGGCAGGTGGCAA +
Preference number: 1 (lower is better)
Translates to: GKCCHVALAPGPVWQ*SSSSTTMVLTGRWQ
Trigger: TTGCCACCTGCCTGTCAAGACCATAGTTGTACTGCTGCTGCTTCATTGCCAGACTGGGCCTGGGGCAAGAGCCACATGGCAGCATTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 90 bp AAAGCCTTGTGCACGCCTTCCGGAAGGAGTTTGTTACACGAGGTCTaGGAGACAGAGGCAGCGTGTTTGAGCTGCTGGTGCGGTGGTCAG +
Preference number: 1 (lower is better)
Translates to: KALCTPSGRSLLHEV*ETEAACLSCWCGGQ
Trigger: CTGACCACCGCACCAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCGGAAGGCGTGCACAAGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
3UTR CCA 90 bp GTGGACGGGTGGACGGGTGGACGGATGGAGGGATGGATGGATGGATaGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACG +
Preference number: 1 (lower is better)
Translates to: VDGWTGGRMEGWMDG*MDGWMRPPVFNKNT
Trigger: CGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCCATCCATCCCTCCATCCGTCCACCCGTCCACCCGTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 90 bp GGCTTGCTGTGTCACCACTCAGAAGCTGCCCACATGAGAAGGGCATaGCGTCACCAGACTGTTTCTGGACTGGGAGACCTTGAGGCTCTA +
Preference number: 1 (lower is better)
Translates to: GLLCHHSEAAHMRRA*RHQTVSGLGDLEAL
Trigger: TAGAGCCTCAAGGTCTCCCAGTCCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGGTGACACAGCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 90 bp ATGGGTGGACGGGTGGACGGGTGGACGGATGGAGGGATGGATGGATaGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAA +
Preference number: 1 (lower is better)
Translates to: MGGRVDGWTDGGMDG*MDGWMDEATCVQQK
Trigger: TTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCCATCCATCCCTCCATCCGTCCACCCGTCCACCCGTCCACCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 90 bp ACAGGAACAAAGGCTTGCTGTGTCACCACTCAGAAGCTGCCCACATaGGAAGGGCATGACGTCACCAGACTGTTTCTGGACTGGGAGACC +
Preference number: 1 (lower is better)
Translates to: TGTKACCVTTQKLPT*EGHDVTRLFLDWET
Trigger: GGTCTCCCAGTCCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGGTGACACAGCAAGCCTTTGTTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 90 bp CACTGTACAGGTAAGAGAAGGGAAAGCTGGATCCACATTCCAGCCTaGAATGAGCCAGACACTATCCTCCCCACCCTCTGTCTCACCCAC +
Preference number: 1 (lower is better)
Translates to: HCTGKRRESWIHIPA*NEPDTILPTLCLTH
Trigger: GTGGGTGAGACAGAGGGTGGGGAGGATAGTGTCTGGCTCATTCCAGGCTGGAATGTGGATCCAGCTTTCCCTTCTCTTACCTGTACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 90 bp GCAGAGATTGCACAAGGCCACAAGTCACTTAGGTGGAGCTGGGGCTaGACAATGCAGGACAGGAACAAAGGCTTGCTGTGTCACCACTCA +
Preference number: 1 (lower is better)
Translates to: AEIAQGHKSLRWSWG*TMQDRNKGLLCHHS
Trigger: TGAGTGGTGACACAGCAAGCCTTTGTTCCTGTCCTGCATTGTCCAGCCCCAGCTCCACCTAAGTGACTTGTGGCCTTGTGCAATCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 90 bp AGAGAGGCAGAGATTGCACAAGGCCACAAGTCACTTAGGTGGAGCTaGGGCTGGACAATGCAGGACAGGAACAAAGGCTTGCTGTGTCAC +
Preference number: 1 (lower is better)
Translates to: REAEIAQGHKSLRWS*GWTMQDRNKGLLCH
Trigger: GTGACACAGCAAGCCTTTGTTCCTGTCCTGCATTGTCCAGCCCCAGCTCCACCTAAGTGACTTGTGGCCTTGTGCAATCTCTGCCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 90 bp GAGAAGGGCATGACGTCACCAGACTGTTTCTGGACTGGGAGACCTTaGGGCTCTAGGAGTATTTCTGACACCTACACTGGTTCCTCAGGT +
Preference number: 1 (lower is better)
Translates to: EKGMTSPDCFWTGRP*GSRSISDTYTGSSG
Trigger: ACCTGAGGAACCAGTGTAGGTGTCAGAAATACTCCTAGAGCCTCAAGGTCTCCCAGTCCAGAAACAGTCTGGTGACGTCATGCCCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 90 bp CAACTTGGCTTTCACTGGGGAAAAATTGGGTCCAGAAAGGCTGAGTaGTGTACCCAAGGCCATCCCGTTGGCTGGTCTGCTATTCCTGTC +
Preference number: 1 (lower is better)
Translates to: QLGFHWGKIGSRKAE*CTQGHPVGWSAIPV
Trigger: GACAGGAATAGCAGACCAGCCAACGGGATGGCCTTGGGTACATCACTCAGCCTTTCTGGACCCAATTTTTCCCCAGTGAAAGCCAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 90 bp AATGCAGGACAGGAACAAAGGCTTGCTGTGTCACCACTCAGAAGCTaGCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGACT +
Preference number: 1 (lower is better)
Translates to: NAGQEQRLAVSPLRS*PHEKGMTSPDCFWT
Trigger: AGTCCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGGTGACACAGCAAGCCTTTGTTCCTGTCCTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 90 bp CGCACAGGTAGAAGCCACAGATGGATGGATGGATGGATGGATGGGTaGATGATGGATGGATGGATGGATGGATGGATGGATGGATGGATG +
Preference number: 1 (lower is better)
Translates to: RTGRSHRWMDGWMDG*MMDGWMDGWMDGWM
Trigger: CATCCATCCATCCATCCATCCATCCATCCATCCATCCATCATCCACCCATCCATCCATCCATCCATCCATCTGTGGCTTCTACCTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 90 bp AGCACAGAGATTCGCACAGGTAGAAGCCACAGATGGATGGATGGATaGATGGATGGGTGGATGATGGATGGATGGATGGATGGATGGATG +
Preference number: 1 (lower is better)
Translates to: STEIRTGRSHRWMDG*MDGWMMDGWMDGWM
Trigger: CATCCATCCATCCATCCATCCATCCATCATCCACCCATCCATCCATCCATCCATCCATCTGTGGCTTCTACCTGTGCGAATCTCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 90 bp CCAAGTGGTGGCGTTTCAGTTCATGTGAATCCATGTAAAGTACTATaGTATCGACGACAGCCTCAAAGCCAGGTGGGAGGAGGAACCCAC +
Preference number: 1 (lower is better)
Translates to: PSGGVSVHVNPCKVL*YRRQPQSQVGGGTH
Trigger: GTGGGTTCCTCCTCCCACCTGGCTTTGAGGCTGTCGTCGATATCATAGTACTTTACATGGATTCACATGAACTGAAACGCCACCACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 90 bp CCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTaGAACTACACACCTGTTGGAGACTTTAAGGTAAAGCTAACCAGG +
Preference number: 1 (lower is better)
Translates to: PWVHISQLKRTSPDS*NYTPVGDFKVKLTR
Trigger: CCTGGTTAGCTTTACCTTAAAGTCTCCAACAGGTGTGTAGTTCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 90 bp TCTTCTATTACCCACACTGTGGTAAAACTTCAGGGCTTCGAACCTTaGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGG +
Preference number: 1 (lower is better)
Translates to: SSITHTVVKLQGFEP*VHISQLKRTSPDSW
Trigger: CCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGAAGCCCTGAAGTTTTACCACAGTGTGGGTAATAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 90 bp CACCCTTTCAACATCCTGGGCCAAGTGGTGGCGTTTCAGTTCATGTaGATCCATGTAAAGTACTATGATATCGACGACAGCCTCAAAGCC +
Preference number: 1 (lower is better)
Translates to: HPFNILGQVVAFQFM*IHVKYYDIDDSLKA
Trigger: GGCTTTGAGGCTGTCGTCGATATCATAGTACTTTACATGGATTCACATGAACTGAAACGCCACCACTTGGCCCAGGATGTTGAAAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 90 bp GGAAATCCTCTCCCAGAGTCATTTCTTATCTACCCAGAAGGAATTTaGACCCTTTCAACATCCTGGGCCAAGTGGTGGCGTTTCAGTTCA +
Preference number: 1 (lower is better)
Translates to: GNPLPESFLIYPEGI*TLSTSWAKWWRFSS
Trigger: TGAACTGAAACGCCACCACTTGGCCCAGGATGTTGAAAGGGTGCAAATTCCTTCTGGGTAGATAAGAAATGACTCTGGGAGAGGATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 90 bp TGTCAGTACAGAGCCAGTCCTTCAATTGGGCTGATCGCCAAGCACTaGAGAACTATGGAATGTGCACTGATGAGAACTCCAGAAATTCAG +
Preference number: 1 (lower is better)
Translates to: CQYRASPSIGLIAKH*RTMECALMRTPEIQ
Trigger: CTGAATTTCTGGAGTTCTCATCAGTGCACATTCCATAGTTCTCCAGTGCTTGGCGATCAGCCCAATTGAAGGACTGGCTCTGTACTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 90 bp ACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCGGCTTGTTaGACTGTTTTTATCATAGTTCCTCTTCTTACACTGGTCACGGTG +
Preference number: 1 (lower is better)
Translates to: TRFWTSEFPTLLAAC*TVFIIVPLLTLVTV
Trigger: CACCGTGACCAGTGTAAGAAGAGGAACTATGATAAAAACAGTTCAACAAGCCGCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 90 bp TCCTTCAATTGGGCTGATCGCCAAGCACTGGAGAACTATGGAATGTaGACTGATGAGAACTCCAGAAATTCAGTCCAACTTGGCTTTCAC +
Preference number: 1 (lower is better)
Translates to: SFNWADRQALENYGM*TDENSRNSVQLGFH
Trigger: GTGAAAGCCAAGTTGGACTGAATTTCTGGAGTTCTCATCAGTGCACATTCCATAGTTCTCCAGTGCTTGGCGATCAGCCCAATTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 90 bp AAAGAATTTTGTAGCACAGAGATTCGCACAGGTAGAAGCCACAGATaGATGGATGGATGGATGGATGGGTGGATGATGGATGGATGGATG +
Preference number: 1 (lower is better)
Translates to: KEFCSTEIRTGRSHR*MDGWMDGWMMDGWM
Trigger: CATCCATCCATCCATCATCCACCCATCCATCCATCCATCCATCCATCTGTGGCTTCTACCTGTGCGAATCTCTGTGCTACAAAATTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 90 bp GCCTCAAAGCCAGGTGGGAGGAGGAACCCACAACTTTGTCTCCACTaGCATCTGTATGTTATCTCATTGTCATTCATGATTCCAGCTATT +
Preference number: 1 (lower is better)
Translates to: ASKPGGRRNPQLCLH*HLYVISLSFMIPAI
Trigger: AATAGCTGGAATCATGAATGACAATGAGATAACATACAGATGTCAGTGGAGACAAAGTTGTGGGTTCCTCCTCCCACCTGGCTTTGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 90 bp AATCACTTCTTACTGCAGAAAGTGAACCAGCACTTTCAAGAACAGTaGTTCTTCAAATGGCGCCCAAGGGCACAGCAGCCACTATTCCAA +
Preference number: 1 (lower is better)
Translates to: NHFLLQKVNQHFQEQ*FFKWRPRAQQPLFQ
Trigger: TTGGAATAGTGGCTGCTGTGCCCTTGGGCGCCATTTGAAGAATCACTGTTCTTGAAAGTGCTGGTTCACTTTCTGCAGTAAGAAGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 90 bp AAAGAAGGCAGACGCCAGACTGCAGCCAGTCAGGCTATCTCTGTATaGCAATTCCGTTTCTTTGCTTATAAATATAGCCTGCACACATTC +
Preference number: 1 (lower is better)
Translates to: KEGRRQTAASQAISV*QFRFFAYKYSLHTF
Trigger: GAATGTGTGCAGGCTATATTTATAAGCAAAGAAACGGAATTGGCATACAGAGATAGCCTGACTGGCTGCAGTCTGGCGTCTGCCTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 90 bp TTACAAAACGCAAATGAAAGGCTCATGCAGCACATGAACCTGGATTaGTCCTTCTCTGTCTCTTCTTTGCCTCGATGCTTTGAGTACAGT +
Preference number: 1 (lower is better)
Translates to: LQNANERLMQHMNLD*SFSVSSLPRCFEYS
Trigger: ACTGTACTCAAAGCATCGAGGCAAAGAAGAGACAGAGAAGGAGCAATCCAGGTTCATGTGCTGCATGAGCCTTTCATTTGCGTTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 90 bp AAGCCCATACATGGAAAGCTGAACCTGAATATCAAGGGACTGCCCTaGCAGATTTTCATGCTAAATCAGATAGTGCTGAAACAGTTAGGA +
Preference number: 1 (lower is better)
Translates to: KPIHGKLNLNIKGLP*QIFMLNQIVLKQLG
Trigger: TCCTAACTGTTTCAGCACTATCTGATTTAGCATGAAAATCTGCCAGGGCAGTCCCTTGATATTCAGGTTCAGCTTTCCATGTATGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 90 bp ATTGGACAAACTATGAAGCAGCTAAATAAAGTGTTAGAAACACAGTaGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGGTC +
Preference number: 1 (lower is better)
Translates to: IGQTMKQLNKVLETQ*YYHCPFHPQSSGKV
Trigger: GACCTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAACACTTTATTTAGCTGCTTCATAGTTTGTCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 90 bp TTCCCAGTTTCAGTCAGCTCAAACTGCAGAACTTTTGCTCTCACTTaGGCTTATCATATAGCTAAAGGGAAATCAGAAAATGCTATATAC +
Preference number: 1 (lower is better)
Translates to: FPVSVSSNCRTFALT*AYHIAKGKSENAIY
Trigger: GTATATAGCATTTTCTGATTTCCCTTTAGCTATATGATAAGCTCAAGTGAGAGCAAAAGTTCTGCAGTTTGAGCTGACTGAAACTGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp AAGCCTTGTGCACGCCTTCCGGAAGGAGTTTGTTACACGAGGTCTGAGAGACAGGAGCTGCTGGTGCGGTaGTCAGCGCGATGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: KPCARLPEGVCYTRSERQELLVR*SARCPR
Trigger: CCTTGGGCATCGCGCTGACCACCGCACCAGCAGCTC...CTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCGGAAGGCGTGCACAAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
3UTR-3UTR GCA 90 bp AAGCCTTGTGCACGCCTTCCGGAAGGAGTTTGTTACACGAGGTCTGAGAGACAGTGTTTGAGCTGCTGGTaGGGTGGTCAGCGCGATGCC +
Preference number: 2 (lower is better)
Translates to: KPCARLPEGVCYTRSERQCLSCW*GGQRDA
Trigger: GGCATCGCGCTGACCACCGCACCAGCAGCTCAAACA...CTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCGGAAGGCGTGCACAAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
3UTR-3UTR CCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGCTTCTGCATGGTTCTTaGCCTTGCCCAGGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWLLHGS*PCPGPA
Trigger: AGCAGGGCCTGGGCAAGGCCAAGAACCATGCAGAAG...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR GCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTATCTCACCCACCTCCCTaGTTCGGCTTCACGGCCACC +
Preference number: 2 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVSHPPP*FGFTAT
Trigger: GGTGGCCGTGAAGCCGAAGCAGGGAGGTGGGTGAGA...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACATTCCAGCCTGGAATaGGCCAGACACTATCCTCCC +
Preference number: 2 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGHSSLE*ARHYPP
Trigger: GGGAGGATAGTGTCTGGCTCATTCCAGGCTGGAATG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATCAGAAGCTGCCCACATaGGAAGGGCATGACGTCACC +
Preference number: 2 (lower is better)
Translates to: FYYYGELQKAVVAAASVDQKLPT*EGHDVT
Trigger: GGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTG...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR GCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTCTGCCATGTGGCTCTTaGCCCAGGCCCAGTCTGGCA +
Preference number: 2 (lower is better)
Translates to: LAINVAYTHCGAEHSELLLPCGS*PRPSLA
Trigger: TGCCAGACTGGGCCTGGGGCAAGAGCCACATGGCAG...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCGGAAATGCTGCCATGTaGCTCTTGCCCCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCGNAAM*LLPQAQ
Trigger: CTGGGCCTGGGGCAAGAGCCACATGGCAGCATTTCC...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGCACTTCACACTCCCATaGCTGGGAAAGGCATCTCCG +
Preference number: 2 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQHFTLP*LGKASP
Trigger: CGGAGATGCCTTTCCCAGCCATGGGAGTGTGAAGTG...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACCAAGGCCATCCCGTTaGCTGGTCTGCTATTCCTGT +
Preference number: 2 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGPRPSR*LVCYSC
Trigger: ACAGGAATAGCAGACCAGCCAACGGGATGGCCTTGG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTACCCAGGCCCTGCTCTTaGAAGGCAAAGGAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVPRPCS*KAKEGK
Trigger: TTTCCCCTCCTTTGCCTTTCAAGAGCAGGGCCTGGG...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTACACCTAGCTCCAGTTaGCTGTCGTCCCAGGGACAC +
Preference number: 2 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTTPSSS*LSSQGH
Trigger: GTGTCCCTGGGACGACAGTCAACTGGAGCTAGGTGT...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR GCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATCATGGTTCTTGGCCTTaGCCAGGCCCTGCTCTTGAA +
Preference number: 2 (lower is better)
Translates to: FYYYGELQKAVVAAASVDHGSWP*PGPALE
Trigger: TTCAAGAGCAGGGCCTGGGCAAGGCCAAGAACCATG...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR GCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGTCACCACTCAGAAGCTaGCCACATGAGAAGGGCATG +
Preference number: 2 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQSPLRS*PHEKGM
Trigger: CATGCCCTTCTCATGTGGGCAGCTTCTGAGTGGTGA...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGCACAAGTCACTTAGGTaGAGCTGGGGCTGGACAATG +
Preference number: 2 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQHKSLR*SWGWTM
Trigger: CATTGTCCAGCCCCAGCTCCACCTAAGTGACTTGTG...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGAAGCCAGTCCTTCAATTaGGCTGATCGCCAAGCACTG +
Preference number: 2 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGSQSFN*ADRQAL
Trigger: CAGTGCTTGGCGATCAGCCCAATTGAAGGACTGGCT...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTGTCACGGTGTGGAACTaGGGCATGCTGGGTAAATGT +
Preference number: 2 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTVTVWN*GMLGKC
Trigger: ACATTTACCCAGCATGCCTCAGTTCCACACCGTGAC...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR GCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTCACCAGGAAGGCTTCTaGATGGTTCTTGGCCTTGCC +
Preference number: 2 (lower is better)
Translates to: LAINVAYTHCGAEHSELLHQEGF*MVLGLA
Trigger: GGCAAGGCCAAGAACCATGCAGAAGCCTTCCTGGTG...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGGTCTTGACAGGCAGGTaGCAAGCAGGAGAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKVLTGR*QAGELQ
Trigger: CTGGAGCTCTCCTGCTTGCCACCTGCCTGTCAAGAC...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 90 bp GGGAAATCCTCTCCCAGAGTCATTTCTTATCTACCCAGAAGGAATTaGCACCCTTTCAACATCCTGGGCCAAGTGGTGGCGTTTCAGTTC +
Preference number: 2 (lower is better)
Translates to: GKSSPRVISYLPRRN*HPFNILGQVVAFQF
Trigger: GAACTGAAACGCCACCACTTGGCCCAGGATGTTGAAAGGGTGCAAATTCCTTCTGGGTAGATAAGAAATGACTCTGGGAGAGGATTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTCACATGAGAAGGGCATaGCGTCACCAGACTGTTTCT +
Preference number: 2 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTHMRRA*RHQTVS
Trigger: AGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTG...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGATTCCTGTTGGGTTTGTaGCTTAACGCTCAAATCAGG +
Preference number: 2 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGFLLGL*LNAQIR
Trigger: CCTGATTTGAGCGTTAAGTCACAAACCCAACAGGAA...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR GCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATACAGGAACAAAGGCTTaGTGTGTCACCACTCAGAAG +
Preference number: 2 (lower is better)
Translates to: FYYYGELQKAVVAAASVDTGTKA*CVTTQK
Trigger: CTTCTGAGTGGTGACACAGCAAGCCTTTGTTCCTGT...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGAGGAAGGCTTCTGCATaGTTCTTGGCCTTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKRKASA*FLALPR
Trigger: CCTGGGCAAGGCCAAGAACCATGCAGAAGCCTTCCT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCTCACACTCCCATGGCTaGGAAAGGCATCTCCGAATT +
Preference number: 2 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCSHSHG*ERHLRI
Trigger: AATTCGGAGATGCCTTTCCCAGCCATGGGAGTGTGA...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCTCCTGGGCCAAGTGGTaGCGTTTCAGTTCATGTGAA +
Preference number: 2 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCSWAKW*RFSSCE
Trigger: TTCACATGAACTGAAACGCCACCACTTGGCCCAGGA...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCACATCCTGGGCCAAGTaGTGGCGTTTCAGTTCATGT +
Preference number: 2 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCTSWAK*WRFSSC
Trigger: ACATGAACTGAAACGCCACCACTTGGCCCAGGATGT...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 90 bp TTCTTCTATTACCCACACTGTGGTAAAACTTCAGGGCTTCGAACCTaGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTG +
Preference number: 2 (lower is better)
Translates to: FFYYPHCGKTSGLRT*GPHLTTQKDLSRLL
Trigger: CAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGAAGCCCTGAAGTTTTACCACAGTGTGGGTAATAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGGTACAACTATGGTCTTaGCAGGCAGGTGGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKVQLWS*QAGGKQ
Trigger: CTGCTTGCCACCTGCCTGTCAAGACCATAGTTGTAC...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTGGCCCAGTCTGGCAATaGAGCAGCAGCAGTACAACT +
Preference number: 2 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIGPVWQ*SSSSTT
Trigger: AGTTGTACTGCTGCTGCTTCATTGCCAGACTGGGCC...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTTCCAGAAAGGCTGAGTaGTGTACCCAAGGCCATCCC +
Preference number: 2 (lower is better)
Translates to: KKNIVGKAQAHHISWPAISRKAE*CTQGHP
Trigger: GGGATGGCCTTGGGTACATCACTCAGCCTTTCTGGA...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTAATCCACATTCCAGCCTaGAATGAGCCAGACACTATC +
Preference number: 2 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVIHIPA*NEPDTI
Trigger: GATAGTGTCTGGCTCATTCCAGGCTGGAATGTGGAT...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGATCTATGACTGTCATCTaGGGTTTTGAAAACAGCACC +
Preference number: 2 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGSMTVI*GFENST
Trigger: GGTGCTGTTTTCAAAACCCCAGATGACAGTCATAGA...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 90 bp AAATTGGGTCCAGAAAGGCTGAGTGATGTACCCAAGGCCATCCCGTaGGCTGGTCTGCTATTCCTGTCCTTAGGATCACATAATACAATT +
Preference number: 2 (lower is better)
Translates to: KLGPERLSDVPKAIP*AGLLFLSLGSHNTI
Trigger: AATTGTATTATGTGATCCTAAGGACAGGAATAGCAGACCAGCCAACGGGATGGCCTTGGGTACATCACTCAGCCTTTCTGGACCCAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 90 bp CACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCGGCTTGTaGAACTGTTTTTATCATAGTTCCTCTTCTTACACTGGTCACGGT +
Preference number: 2 (lower is better)
Translates to: HSLLDFRISHPPCGL*NCFYHSSSSYTGHG
Trigger: ACCGTGACCAGTGTAAGAAGAGGAACTATGATAAAAACAGTTCAACAAGCCGCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGTGGACTGGGAGACCTTaGGGCTCTAGGAGTATTTCT +
Preference number: 2 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKWTGRP*GSRSIS
Trigger: AGAAATACTCCTAGAGCCTCAAGGTCTCCCAGTCCA...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATCCATGTAAAGTACTATaGTATCGACGACAGCCTCAA +
Preference number: 2 (lower is better)
Translates to: FYYYGELQKAVVAAASVDPCKVL*YRRQPQ
Trigger: TTGAGGCTGTCGTCGATATCATAGTACTTTACATGG...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTCACTTTCAAGAACAGTaGTTCTTCAAATGGCGCCCA +
Preference number: 2 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTHFQEQ*FFKWRP
Trigger: TGGGCGCCATTTGAAGAATCACTGTTCTTGAAAGTG...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATGTATCCCAATCACCATaGCTTGTGTTACCAAAAGCT +
Preference number: 2 (lower is better)
Translates to: FYYYGELQKAVVAAASVDVSQSP*LVLPKA
Trigger: AGCTTTTGGTAACACAAGTCATGGTGATTGGGATAC...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR GCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTGGAAAAGGGAAATGCTaGCATGTGGCTCTTGCCCCA +
Preference number: 2 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIGKGKC*HVALAP
Trigger: TGGGGCAAGAGCCACATGGCAGCATTTCCCTTTTCC...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR GCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATATGAGCAGCAGAGCTTaGACGCTGTTGAACTATTTT +
Preference number: 2 (lower is better)
Translates to: FYYYGELQKAVVAAASVDMSSRA*TLLNYF
Trigger: AAAATAGTTCAACAGCGTGCAAGCTCTGCTGCTCAT...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGACCTCTCCAGACTCCTaGAACTACACACCTGTTGGA +
Preference number: 2 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKTSPDS*NYTPVG
Trigger: TCCAACAGGTGTGTAGTTCCAGGAGTCTGGAGAGGT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 90 bp TCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCGGCTaGTTGAACTGTTTTTATCATAGTTCCTCTTCTTACACTGGTCAC +
Preference number: 2 (lower is better)
Translates to: SHSLLDFRISHPPCG*LNCFYHSSSSYTGH
Trigger: GTGACCAGTGTAAGAAGAGGAACTATGATAAAAACAGTTCAACAAGCCGCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGATTGCCATTATACCCTaGACAGGCTATGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKIAIIP*TGYEQQ
Trigger: CTGCTGCTCATAGCCTGTTCAGGGTATAATGGCAAT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR GCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCGAGAACTATGGAATGTaGACTGATGAGAACTCCAGA +
Preference number: 2 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCENYGM*TDENSR
Trigger: TCTGGAGTTCTCATCAGTGCACATTCCATAGTTCTC...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCCAGAGCCTAGAACTCTaGCCTGTTCTGCTTATAAAT +
Preference number: 2 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCQSLEL*PVLLIN
Trigger: ATTTATAAGCAGAACAGGCCAGAGTTCTAGGCTCTG...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGAAAATTCAGTCCAACTTaGCTTTCACTGGGGAAAAAT +
Preference number: 2 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGKFSPT*LSLGKN
Trigger: ATTTTTCCCCAGTGAAAGCCAAGTTGGACTGAATTT...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGTTCCTCTTCTTACACTaGTCACGGTGTGGAACTGAG +
Preference number: 2 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKFLFLH*SRCGTE
Trigger: CTCAGTTCCACACCGTGACCAGTGTAAGAAGAGGAA...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTACTGATTCTACTACTATaGAGAGCTTCAAAAGGCGGT +
Preference number: 2 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVLILLL*RASKGG
Trigger: ACCGCCTTTTGAAGCTCTCCATAGTAGTAGAATCAG...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTAGCTGTGCAGACTTATaGGGGAACATAAGTGACCCC +
Preference number: 2 (lower is better)
Translates to: KKNIVGKAQAHHISWPAISCADL*GNISDP
Trigger: GGGGTCACTTATGTTCCCCCATAAGTCTGCACAGCT...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTACAACTTTGTCTCCACTaGCATCTGTATGTTATCTCA +
Preference number: 2 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVQLCLH*HLYVIS
Trigger: TGAGATAACATACAGATGTCAGTGGAGACAAAGTTG...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTACTCCTTGCGGCTTGTTaGACTGTTTTTATCATAGTT +
Preference number: 2 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVLLAAC*TVFIIV
Trigger: AACTATGATAAAAACAGTTCAACAAGCCGCAAGGAG...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTGGTAGTGTCAGTGCGTaGGATTTTGGTCAATCTCTC +
Preference number: 2 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIGSVSA*DFGQSL
Trigger: GAGAGATTGACCAAAATCCCACGCACTGACACTACC...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTTGGGTAAATGTCAAATaGAATGAAGGCACACAATCT +
Preference number: 2 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTWVNVK*NEGTQS
Trigger: AGATTGTGTGCCTTCATTTCATTTGACATTTACCCA...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGCTCTTAGCCTTCCAATaGCAAAATGAAAAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKLLAFQ*QNEKLP
Trigger: TGGCAGCTTTTCATTTTGTCATTGGAAGGCTAAGAG...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR GCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTGCTGGGGCTGGACAATaGAGGACAGGAACAAAGGCT +
Preference number: 2 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVAGAGQ*RTGTKA
Trigger: AGCCTTTGTTCCTGTCCTGCATTGTCCAGCCCCAGC...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 90 bp CCATTATACCCTGAACAGGCTATGAGCAGCAGAGCTTGCACGCTGTaGAACTATTTTTATCGTCTGAACTTGAGTTGTTTGATTCCAATC +
Preference number: 2 (lower is better)
Translates to: PLYPEQAMSSRACTL*NYFYRLNLSCLIPI
Trigger: GATTGGAATCAAACAACTCAAGTTCAGACGATAAAAATAGTTCAACAGCGTGCAAGCTCTGCTGCTCATAGCCTGTTCAGGGTATAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTGTCCTTCAATTGGGCTaGTCGCCAAGCACTGGAGAA +
Preference number: 2 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVVLQLG*SPSTGE
Trigger: TTCTCCAGTGCTTGGCGATCAGCCCAATTGAAGGAC...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTTCTTACTGCAGAAAGTaGACCAGCACTTTCAAGAAC +
Preference number: 2 (lower is better)
Translates to: KKNIVGKAQAHHISWPAISYCRK*TSTFKN
Trigger: GTTCTTGAAAGTGCTGGTTCACTTTCTGCAGTAAGA...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR GCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTAGGGGAAAAGGGAAATaGTGCCATGTGGCTCTTGCC +
Preference number: 2 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVRGKGK*CHVALA
Trigger: GGCAAGAGCCACATGGCAGCATTTCCCTTTTCCCCT...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTGCAATGCACCTGATGTaGAAAACCAAAATTGTTATC +
Preference number: 2 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIAMHLM*KTKIVI
Trigger: GATAACAATTTTGGTTTTCCACATCAGGTGCATTGC...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 90 bp CAGAGCTTGCACGCTGTTGAACTATTTTTATCGTCTGAACTTGAGTaGTTTGATTCCAATCAGTTTGGTTTGTGGAGACTCATATTAAGG +
Preference number: 2 (lower is better)
Translates to: QSLHAVELFLSSELE*FDSNQFGLWRLILR
Trigger: CCTTAATATGAGTCTCCACAAACCAAACTGATTGGAATCAAACAACTCAAGTTCAGACGATAAAAATAGTTCAACAGCGTGCAAGCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTAATAAAATGCAGTTCTaGGGTCAACACCTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVNKMQF*GQHLAP
Trigger: TGGAGCTAGGTGTTGACCTCAGAACTGCATTTTATT...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR TCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTAGAGTAACAGAAACATaGAGACATACAGAATCCGCT +
Preference number: 2 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVRVTET*RHTESA
Trigger: AGCGGATTCTGTATGTCTTCATGTTTCTGTTACTCT...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTTGCATTCCAGTTTCTTaGTATTACACTCCTGATAGC +
Preference number: 2 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVCIPVS*YYTPDS
Trigger: GCTATCAGGAGTGTAATACCAAGAAACTGGAATGCA...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 90 bp TTTTTATCGTCTGAACTTGAGTTGTTTGATTCCAATCAGTTTGGTTaGTGGAGACTCATATTAAGGGATGCATTCCAGTTTCTTGGTATT +
Preference number: 2 (lower is better)
Translates to: FLSSELELFDSNQFG*WRLILRDAFQFLGI
Trigger: AATACCAAGAAACTGGAATGCATCCCTTAATATGAGTCTCCACAAACCAAACTGATTGGAATCAAACAACTCAAGTTCAGACGATAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTAATCAGTTTGGTTTGTaGAGACTCATATTAAGGGAT +
Preference number: 2 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVNQFGL*RLILRD
Trigger: ATCCCTTAATATGAGTCTCCACAAACCAAACTGATT...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTAGGAACTCATTTTATTaGACAAACTATGAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVRNSFY*TNYEAA
Trigger: AGCTGCTTCATAGTTTGTCCAATAAAATGAGTTCCT...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp TGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTaGGCTGCTGGTGCGGTGGTCAGCGCGATGCCCAAG +
Preference number: 3 (lower is better)
Translates to: CYTRSERQRQRV*AAGAVVSAMPK
Trigger: CTTGGGCATCGCGCTGACCACCGCACCAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
3UTR-3UTR CAA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATGCTGCCATGTGGCTCTaGCCCCAGGCCCAGTCTGGC +
Preference number: 3 (lower is better)
Translates to: FYYYGELQKAVVAAASVDAAMWL*PQAQSG
Trigger: GCCAGACTGGGCCTGGGGCAAGAGCCACATGGCAGC...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 72 bp AAGGAGGGGAAAAGGGAAATGCTGCCATGTGGCTCTTaGCCCAGGCCCAGTCTGGCAATGAAGCAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: KEGKREMLPCGS*PRPSLAMKQQQ
Trigger: CTGCTGCTGCTTCATTGCCAGACTGGGCCTGGGGCAAGAGCCACATGGCAGCATTTCCCTTTTCCCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp TGCACGCCTTCCGGAAGGAGTTTGTTACACGAGGTCTaGGAGACAGAGGCAGCGTGTTTGAGCTGCTGGTGC +
Preference number: 3 (lower is better)
Translates to: CTPSGRSLLHEV*ETEAACLSCWC
Trigger: GCACCAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCGGAAGGCGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
3UTR CCA 72 bp TTGGGAGGCCGAGGCGGGCAAATCACCTCACCTGCCTaGCCAATGTGGCGAAACCCCTCCCTACTAAAAATA +
Preference number: 3 (lower is better)
Translates to: LGGRGGQITSPA*PMWRNPSLLKI
Trigger: TATTTTTAGTAGGGAGGGGTTTCGCCACATTGGCCAGGCAGGTGAGGTGATTTGCCCGCCTCGGCCTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACCTGCGGACTCACTTTaGGCGGCAGTGAGGTGCCAA +
Preference number: 3 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGPADSL*AAVRCQ
Trigger: TTGGCACCTCACTGCCGCCAAAAGTGAGTCCGCAGG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp GAGAAGGGAAAGCTGGATCCACATTCCAGCCTGGAATaGGCCAGACACTATCCTCCCCACCCTCTGTCTCAC +
Preference number: 3 (lower is better)
Translates to: EKGKLDPHSSLE*ARHYPPHPLSH
Trigger: GTGAGACAGAGGGTGGGGAGGATAGTGTCTGGCTCATTCCAGGCTGGAATGTGGATCCAGCTTTCCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp GGTTTCACTGTGTTAGCCAGGATTGTCTCGATCTCCTaGCCTCGTGATCCGTCCACCTCAGCCTCCCAGAGT +
Preference number: 3 (lower is better)
Translates to: GFTVLARIVSIS*PRDPSTSASQS
Trigger: ACTCTGGGAGGCTGAGGTGGACGGATCACGAGGTCAGGAGATCGAGACAATCCTGGCTAACACAGTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 72 bp GGCCAGGTTCATCCTAGCACTTCACACTCCCATGGCTaGGAAAGGCATCTCCGAATTAGGAAACCACCTCCC +
Preference number: 3 (lower is better)
Translates to: GQVHPSTSHSHG*ERHLRIRKPPP
Trigger: GGGAGGTGGTTTCCTAATTCGGAGATGCCTTTCCCAGCCATGGGAGTGTGAAGTGCTAGGATGAACCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp AAGGCTTGCTGTGTCACCACTCAGAAGCTGCCCACATaGGAAGGGCATGACGTCACCAGACTGTTTCTGGAC +
Preference number: 3 (lower is better)
Translates to: KACCVTTQKLPT*EGHDVTRLFLD
Trigger: GTCCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGGTGACACAGCAAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp TGGCTTTCACTGGGGAAAAATTGGGTCCAGAAAGGCTaGGTGATGTACCCAAGGCCATCCCGTTGGCTGGTC +
Preference number: 3 (lower is better)
Translates to: WLSLGKNWVQKG*VMYPRPSRWLV
Trigger: GACCAGCCAACGGGATGGCCTTGGGTACATCACTCAGCCTTTCTGGACCCAATTTTTCCCCAGTGAAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 72 bp GGTAAGAGAAGGGAAAGCTGGATCCACATTCCAGCCTaGAATGAGCCAGACACTATCCTCCCCACCCTCTGT +
Preference number: 3 (lower is better)
Translates to: GKRRESWIHIPA*NEPDTILPTLC
Trigger: ACAGAGGGTGGGGAGGATAGTGTCTGGCTCATTCCAGGCTGGAATGTGGATCCAGCTTTCCCTTCTCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 72 bp GAGATTGCACAAGGCCACAAGTCACTTAGGTGGAGCTaGGGCTGGACAATGCAGGACAGGAACAAAGGCTTG +
Preference number: 3 (lower is better)
Translates to: EIAQGHKSLRWS*GWTMQDRNKGL
Trigger: CAAGCCTTTGTTCCTGTCCTGCATTGTCCAGCCCCAGCTCCACCTAAGTGACTTGTGGCCTTGTGCAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp TTTCACTGGGGAAAAATTGGGTCCAGAAAGGCTGAGTaGTGTACCCAAGGCCATCCCGTTGGCTGGTCTGCT +
Preference number: 3 (lower is better)
Translates to: FHWGKIGSRKAE*CTQGHPVGWSA
Trigger: AGCAGACCAGCCAACGGGATGGCCTTGGGTACATCACTCAGCCTTTCTGGACCCAATTTTTCCCCAGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 72 bp CTGCCAAAACATGTCCAAAGAAGGCAGACGCCAGACTaGAGCCAGTCAGGCTATCTCTGTATGCCAATTCCG +
Preference number: 3 (lower is better)
Translates to: LPKHVQRRQTPD*SQSGYLCMPIP
Trigger: CGGAATTGGCATACAGAGATAGCCTGACTGGCTGCAGTCTGGCGTCTGCCTTCTTTGGACATGTTTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 72 bp TGGACGGATGGAGGGATGGATGGATGGATGGATGGATaGATGGATGAGGCCACCTGTGTTCAACAAAAACAC +
Preference number: 3 (lower is better)
Translates to: WTDGGMDGWMDG*MDEATCVQQKH
Trigger: GTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCCATCCATCCCTCCATCCGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCACCTGTAGTGGAGGATaGAGCCCACTGAGCATCTCA +
Preference number: 3 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCTCSGG*SPLSIS
Trigger: TGAGATGCTCAGTGGGCTCAATCCTCCACTACAGGT...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTCCCAAGGCCATCCCGTaGGCTGGTCTGCTATTCCTG +
Preference number: 3 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIPKAIP*AGLLFL
Trigger: CAGGAATAGCAGACCAGCCAACGGGATGGCCTTGGG...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACAACTAGACAGCAAATaGAGGTGCACAGCTCCTCTT +
Preference number: 3 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGQLDSK*RCTAPL
Trigger: AAGAGGAGCTGTGCACCTCAATTTGCTGTCTAGTTG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp ATGACGTCACCAGACTGTTTCTGGACTGGGAGACCTTaGGGCTCTAGGAGTATTTCTGACACCTACACTGGT +
Preference number: 3 (lower is better)
Translates to: MTSPDCFWTGRP*GSRSISDTYTG
Trigger: ACCAGTGTAGGTGTCAGAAATACTCCTAGAGCCTCAAGGTCTCCCAGTCCAGAAACAGTCTGGTGACGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 72 bp CTCCCAGAGTCATTTCTTATCTACCCAGAAGGAATTTaGACCCTTTCAACATCCTGGGCCAAGTGGTGGCGT +
Preference number: 3 (lower is better)
Translates to: LPESFLIYPEGI*TLSTSWAKWWR
Trigger: ACGCCACCACTTGGCCCAGGATGTTGAAAGGGTGCAAATTCCTTCTGGGTAGATAAGAAATGACTCTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 72 bp AGAGCCAGTCCTTCAATTGGGCTGATCGCCAAGCACTaGAGAACTATGGAATGTGCACTGATGAGAACTCCA +
Preference number: 3 (lower is better)
Translates to: RASPSIGLIAKH*RTMECALMRTP
Trigger: TGGAGTTCTCATCAGTGCACATTCCATAGTTCTCCAGTGCTTGGCGATCAGCCCAATTGAAGGACTGGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 72 bp ATTCGCACAGGTAGAAGCCACAGATGGATGGATGGATaGATGGATGGGTGGATGATGGATGGATGGATGGAT +
Preference number: 3 (lower is better)
Translates to: IRTGRSHRWMDG*MDGWMMDGWMD
Trigger: ATCCATCCATCCATCCATCATCCACCCATCCATCCATCCATCCATCCATCTGTGGCTTCTACCTGTGCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 72 bp TGTAGCACAGAGATTCGCACAGGTAGAAGCCACAGATaGATGGATGGATGGATGGATGGGTGGATGATGGAT +
Preference number: 3 (lower is better)
Translates to: CSTEIRTGRSHR*MDGWMDGWMMD
Trigger: ATCCATCATCCACCCATCCATCCATCCATCCATCCATCTGTGGCTTCTACCTGTGCGAATCTCTGTGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 72 bp ACCCACACTGTGGTAAAACTTCAGGGCTTCGAACCTTaGGTCCACATCTCACAACTCAAAAGGACCTCTCCA +
Preference number: 3 (lower is better)
Translates to: THTVVKLQGFEP*VHISQLKRTSP
Trigger: TGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGAAGCCCTGAAGTTTTACCACAGTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTGACAGGAACAAAGGCTaGCTGTGTCACCACTCAGAA +
Preference number: 3 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTDRNKG*LCHHSE
Trigger: TTCTGAGTGGTGACACAGCAAGCCTTTGTTCCTGTC...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATGAGGAACCCACAACTTaGTCTCCACTGACATCTGTA +
Preference number: 3 (lower is better)
Translates to: FYYYGELQKAVVAAASVDEEPTT*SPLTSV
Trigger: TACAGATGTCAGTGGAGACAAAGTTGTGGGTTCCTC...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGATATGAGCAGCAGAGCTaGCACGCTGTTGAACTATTT +
Preference number: 3 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGYEQQS*HAVELF
Trigger: AAATAGTTCAACAGCGTGCAAGCTCTGCTGCTCATA...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp ATAAGTGTCAGTACAGAGCCAGTCCTTCAATTGGGCTaGTCGCCAAGCACTGGAGAACTATGGAATGTGCAC +
Preference number: 3 (lower is better)
Translates to: ISVSTEPVLQLG*SPSTGELWNVH
Trigger: GTGCACATTCCATAGTTCTCCAGTGCTTGGCGATCAGCCCAATTGAAGGACTGGCTCTGTACTGACACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp TTACTGCAGAAAGTGAACCAGCACTTTCAAGAACAGTaGTTCTTCAAATGGCGCCCAAGGGCACAGCAGCCA +
Preference number: 3 (lower is better)
Translates to: LLQKVNQHFQEQ*FFKWRPRAQQP
Trigger: TGGCTGCTGTGCCCTTGGGCGCCATTTGAAGAATCACTGTTCTTGAAAGTGCTGGTTCACTTTCTGCAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp TGGAGGGATGGATGGATGGATGGATGGATGGATGGATaGGGCCACCTGTGTTCAACAAAAACACGTAATGGA +
Preference number: 3 (lower is better)
Translates to: WRDGWMDGWMDG*GHLCSTKTRNG
Trigger: TCCATTACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCCATCCATCCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTAGTACAACTATGGTCTaGACAGGCAGGTGGCAAGCA +
Preference number: 3 (lower is better)
Translates to: LAINVAYTHCGAEHSELLSTTMV*TGRWQA
Trigger: TGCTTGCCACCTGCCTGTCAAGACCATAGTTGTACT...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACCCAATCACCATGACTaGTGTTACCAAAAGCTAACT +
Preference number: 3 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGPNHHD*CYQKLT
Trigger: AGTTAGCTTTTGGTAACACAAGTCATGGTGATTGGG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTGCTTCTGCATGGTTCTaGGCCTTGCCCAGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVASAWF*ALPRPC
Trigger: GCAGGGCCTGGGCAAGGCCAAGAACCATGCAGAAGC...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTCTGTCATCTGGGGTTTaGAAAACAGCACCTAGAAAC +
Preference number: 3 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTLSSGV*KTAPRN
Trigger: GTTTCTAGGTGCTGTTTTCAAAACCCCAGATGACAG...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTCTACCCAGAAGGAATTaGCACCCTTTCAACATCCTG +
Preference number: 3 (lower is better)
Translates to: LAINVAYTHCGAEHSELLLPRRN*HPFNIL
Trigger: CAGGATGTTGAAAGGGTGCAAATTCCTTCTGGGTAG...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp GGCGTTTCAGTTCATGTGAATCCATGTAAAGTACTATaGTATCGACGACAGCCTCAAAGCCAGGTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: GVSVHVNPCKVL*YRRQPQSQVGG
Trigger: TCCTCCCACCTGGCTTTGAGGCTGTCGTCGATATCATAGTACTTTACATGGATTCACATGAACTGAAACGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp CAATCACAGCAGCCAAACCTTCAGTCAATCGTCGGCTaGAGGCTGCTAAAACATGTTCAGGTAAGGCAAATG +
Preference number: 3 (lower is better)
Translates to: QSQQPNLQSIVG*RLLKHVQVRQM
Trigger: CATTTGCCTTACCTGAACATGTTTTAGCAGCCTTCAGCCGACGATTGACTGAAGGTTTGGCTGCTGTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 72 bp TGGGCTGATCGCCAAGCACTGGAGAACTATGGAATGTaGACTGATGAGAACTCCAGAAATTCAGTCCAACTT +
Preference number: 3 (lower is better)
Translates to: WADRQALENYGM*TDENSRNSVQL
Trigger: AAGTTGGACTGAATTTCTGGAGTTCTCATCAGTGCACATTCCATAGTTCTCCAGTGCTTGGCGATCAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 72 bp GCAAATGAAAGGCTCATGCAGCACATGAACCTGGATTaGTCCTTCTCTGTCTCTTCTTTGCCTCGATGCTTT +
Preference number: 3 (lower is better)
Translates to: ANERLMQHMNLD*SFSVSSLPRCF
Trigger: AAAGCATCGAGGCAAAGAAGAGACAGAGAAGGAGCAATCCAGGTTCATGTGCTGCATGAGCCTTTCATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTTCTTCAGAAAGCTCCTaGCTAGGATGGCCAGGTTCA +
Preference number: 3 (lower is better)
Translates to: KKNIVGKAQAHHISWPAISSESS*LGWPGS
Trigger: TGAACCTGGCCATCCTAGCAAGGAGCTTTCTGAAGA...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACTTCACTTTTTCTGTTaGGTGGGTGAATATCAGTTA +
Preference number: 3 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGLHFFC*VGEYQL
Trigger: TAACTGATATTCACCCACCAAACAGAAAAAGTGAAG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCGAAATTCAGTCCAACTaGGCTTTCACTGGGGAAAAA +
Preference number: 3 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCEIQSN*AFTGEK
Trigger: TTTTTCCCCAGTGAAAGCCAAGTTGGACTGAATTTC...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTGCGCCCGGCCCCCATTaGAAATTATTCTTTGGCAAA +
Preference number: 3 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIAPGPH*KLFFGK
Trigger: TTTGCCAAAGAATAATTTCAAATGGGGGCCGGGCGC...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 72 bp AGACGCCAGACTGCAGCCAGTCAGGCTATCTCTGTATaGCAATTCCGTTTCTTTGCTTATAAATATAGCCTG +
Preference number: 3 (lower is better)
Translates to: RRQTAASQAISV*QFRFFAYKYSL
Trigger: CAGGCTATATTTATAAGCAAAGAAACGGAATTGGCATACAGAGATAGCCTGACTGGCTGCAGTCTGGCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 72 bp GTGGAGACTCATATTAAGGGATGCATTCCAGTTTCTTaGTATTACACTCCTGATAGCCATCCTAAGGTCCCC +
Preference number: 3 (lower is better)
Translates to: VETHIKGCIPVS*YYTPDSHPKVP
Trigger: GGGGACCTTAGGATGGCTATCAGGAGTGTAATACCAAGAAACTGGAATGCATCCCTTAATATGAGTCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 72 bp CACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTaGAACTACACACCTGTTGGAGACTTTAAGGTAAAG +
Preference number: 3 (lower is better)
Translates to: HISQLKRTSPDS*NYTPVGDFKVK
Trigger: CTTTACCTTAAAGTCTCCAACAGGTGTGTAGTTCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGACAACAGGCTCCTCTTaGCCTGTACCGATAATAAGT +
Preference number: 3 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKTTGSS*PVPIIS
Trigger: ACTTATTATCGGTACAGGCAAAGAGGAGCCTGTTGT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp CCAGGTGGGAGGAGGAACCCACAACTTTGTCTCCACTaGCATCTGTATGTTATCTCATTGTCATTCATGATT +
Preference number: 3 (lower is better)
Translates to: PGGRRNPQLCLH*HLYVISLSFMI
Trigger: AATCATGAATGACAATGAGATAACATACAGATGTCAGTGGAGACAAAGTTGTGGGTTCCTCCTCCCACCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 72 bp CCATTATACCCTGAACAGGCTATGAGCAGCAGAGCTTaGACGCTGTTGAACTATTTTTATCGTCTGAACTTG +
Preference number: 3 (lower is better)
Translates to: PLYPEQAMSSRA*TLLNYFYRLNL
Trigger: CAAGTTCAGACGATAAAAATAGTTCAACAGCGTGCAAGCTCTGCTGCTCATAGCCTGTTCAGGGTATAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTATTGATTCCAATCAGTTaGGTTTGTGGAGACTCATAT +
Preference number: 3 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVLIPIS*VCGDSY
Trigger: ATATGAGTCTCCACAAACCAAACTGATTGGAATCAA...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp TGGACTTCAGAATTTCCCACCCTCCTTGCGGCTTGTTaGACTGTTTTTATCATAGTTCCTCTTCTTACACTG +
Preference number: 3 (lower is better)
Translates to: WTSEFPTLLAAC*TVFIIVPLLTL
Trigger: CAGTGTAAGAAGAGGAACTATGATAAAAACAGTTCAACAAGCCGCAAGGAGGGTGGGAAATTCTGAAGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 72 bp ATACATGCCTTTGCAGTCCACAATTTTGGCATGTTATaGAAACAAAGAGGGTTTCTCACTTCTAGTGGAGCC +
Preference number: 3 (lower is better)
Translates to: IHAFAVHNFGML*KQRGFLTSSGA
Trigger: GGCTCCACTAGAAGTGAGAAACCCTCTTTGTTTCCATAACATGCCAAAATTGTGGACTGCAAAGGCATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTCTGTATGTTATCTCATaGTCATTCATGATTCCAGCT +
Preference number: 3 (lower is better)
Translates to: LAINVAYTHCGAEHSELLLYVIS*SFMIPA
Trigger: AGCTGGAATCATGAATGACAATGAGATAACATACAG...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTATGAATGCCACTAGATaGATGACCTTTATGATGACC +
Preference number: 3 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIMNATR*MTFMMT
Trigger: GGTCATCATAAAGGTCATCAATCTAGTGGCATTCAT...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTTTCACTGGGGAAAAATaGGGTCCAGAAAGGCTGAGT +
Preference number: 3 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVFTGEK*GPERLS
Trigger: ACTCAGCCTTTCTGGACCCAATTTTTCCCCAGTGAA...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTAATTTCCCACCCTCCTaGCGGCTTGTTGAACTGTTT +
Preference number: 3 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVNFPPS*RLVELF
Trigger: AAACAGTTCAACAAGCCGCAAGGAGGGTGGGAAATT...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTTCGTCTGAACTTGAGTaGTTTGATTCCAATCAGTTT +
Preference number: 3 (lower is better)
Translates to: KKNIVGKAQAHHISWPAISSELE*FDSNQF
Trigger: AAACTGATTGGAATCAAACAACTCAAGTTCAGACGA...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp ACCTTTATGATGACCCATCTAACAGTGCAATGCACCTaGTGTGGAAAACCAAAATTGTTATCTGACAGACGT +
Preference number: 3 (lower is better)
Translates to: TFMMTHLTVQCT*CGKPKLLSDRR
Trigger: ACGTCTGTCAGATAACAATTTTGGTTTTCCACATCAGGTGCATTGCACTGTTAGATGGGTCATCATAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 72 bp CAATCAGTTTGGTTTGTGGAGACTCATATTAAGGGATaGATTCCAGTTTCTTGGTATTACACTCCTGATAGC +
Preference number: 3 (lower is better)
Translates to: QSVWFVETHIKG*IPVSWYYTPDS
Trigger: GCTATCAGGAGTGTAATACCAAGAAACTGGAATGCATCCCTTAATATGAGTCTCCACAAACCAAACTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CCA 72 bp ACTATGAAGCAGCTAAATAAAGTGTTAGAAACACAGTaGTACTACCATTGTCCCTTTCACCCTCAGTCTTCT +
Preference number: 3 (lower is better)
Translates to: TMKQLNKVLETQ*YYHCPFHPQSS
Trigger: AGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAACACTTTATTTAGCTGCTTCATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR-3UTR CAA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTCACCCTCCTTGCGGCTaGTTGAACTGTTTTTATCAT +
Preference number: 3 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVHPPCG*LNCFYH
Trigger: ATGATAAAAACAGTTCAACAAGCCGCAAGGAGGGTG...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR TCA 72 bp AATCAGATAGTGCTGAAACAGTTAGGATGTGCAAATTaGATGAATGCCACTAGATTGATGACCTTTATGATG +
Preference number: 3 (lower is better)
Translates to: NQIVLKQLGCAN*MNATRLMTFMM
Trigger: CATCATAAAGGTCATCAATCTAGTGGCATTCATTCAATTTGCACATCCTAACTGTTTCAGCACTATCTGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR GCA 72 bp TACATAGCAGACATGCTATGTATATATACATGCCTTTaGAGTCCACAATTTTGGCATGTTATGGAAACAAAG +
Preference number: 3 (lower is better)
Translates to: YIADMLCIYTCL*SPQFWHVMETK
Trigger: CTTTGTTTCCATAACATGCCAAAATTGTGGACTGCAAAGGCATGTATATATACATAGCATGTCTGCTATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp AGAGACAGAGGCAGCGTGTTTGAGCTGCTGGTGCGGTGGTCAGCGCGATGCCCACAGAGGCAGCGTGTTTaGGCTGCTGGTGCGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RDRGSVFELLVRWSARCPQRQRV*AAGAVV
Trigger: GACCACCGCACCAGCAGCTCAAACACGCTGCCTCTG...TGGGCATCGCGCTGACCACCGCACCAGCAGCTCAAACACGCTGCCTCTGTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR CCA 90 bp CGAACAGGAGGCTGGGGCCTCAGCACCCTCGGGAAATTGTTCAGTGTCGCTGTTGGACGAACAGGAGGCTaGGGCCTCAGCACCCTCGGG +
Preference number: 4 (lower is better)
Translates to: RTGGWGLSTLGKLFSVAVGRTGG*GLSTLG
Trigger: CCCGAGGGTGCTGAGGCCCCAGCCTCCTGTTCGTCC...AACAGCGACACTGAACAATTTCCCGAGGGTGCTGAGGCCCCAGCCTCCTGTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514533.1
CDS-3UTR CCA 90 bp GTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGCTGCTGGTGCGGTGGGAGCTGCTGGTGCGGTaGTCAGCGCGATGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: VTRGLRDRGSVFELLVRWELLVR*SARCPR
Trigger: CCTTGGGCATCGCGCTGACCACCGCACCAGCAGCTC...CCACCGCACCAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR TCA 90 bp GGTCTGAGAGACAGAGGCAGCGTGTTTGAGCTGCTGGTGCGGTGGTCAGCGCGATCAACCGAAAGCGTCTaGACCGGAATGCTCGACGGA +
Preference number: 4 (lower is better)
Translates to: GLRDRGSVFELLVRWSARSTESV*TGMLDG
Trigger: TCCGTCGAGCATTCCGGTTCAGACGCTTTCGGTTGA...TCGCGCTGACCACCGCACCAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR GCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGGGCGAGGGACGCAGGTaGGGGTTGCACAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQGEGRR*GLHRPS
Trigger: GCTCGGCCTGTGCAACCCGCACCTGCGTCCCTCGCC...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGCTGCTGGTGCGGTGGTGTTTGAGCTGCTGGTaGGGTGGTCAGCGCGATGCC +
Preference number: 4 (lower is better)
Translates to: VTRGLRDRGSVFELLVRWCLSCW*GGQRDA
Trigger: GGCATCGCGCTGACCACCGCACCAGCAGCTCAAACA...CCACCGCACCAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR TCA 90 bp TTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGCTGCTGGTGCGGGGACGGTCCGCGAGATaGCGGATCCGCGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: FVTRGLRDRGSVFELLVRGRSAR*RIRDVS
Trigger: AGAGACATCGCGGATCCGTCATCTCGCGGACCGTCC...CCGCACCAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR GCA 90 bp TTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGCTGCTGGTGCGGCGGTACGGCAGAACCTaGTTGTTGGCCACCACGACG +
Preference number: 4 (lower is better)
Translates to: FVTRGLRDRGSVFELLVRRYGRT*LLATTT
Trigger: CGTCGTGGTGGCCAACAAGCAGGTTCTGCCGTACCG...CCGCACCAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR GCA 90 bp AAGCCTTGTGCACGCCTTCCGGAAGGAGTTTGTTACACGAGGTCTGAGAGACAGGCAGCGTGTTTGAGCTaGTGGTGCGGTGGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: KPCARLPEGVCYTRSERQAACLS*WCGGQR
Trigger: GCGCTGACCACCGCACCAGCAGCTCAAACACGCTGC...CTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCGGAAGGCGTGCACAAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR GCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTGACGCAGGTGCGGGTTaGACAGGCCGAGCCCACTCG +
Preference number: 4 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTDAGAG*TGRAHS
Trigger: CGAGTGGGCTCGGCCTGTGCAACCCGCACCTGCGTC...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGTCTCACCCACCTCCCTaGTTCGGCTTCACGGCCACC +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQSHPPP*FGFTAT
Trigger: GGTGGCCGTGAAGCCGAAGCAGGGAGGTGGGTGAGA...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TTCCGGAAGGAGTTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGGCGTCTGAACCGGAATaGTCGACGGAAGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: FRKEFVTRGLRDRGSVFEASEPE*STEGSA
Trigger: GGCGCTGCCTTCCGTCGAGCATTCCGGTTCAGACGC...CTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR CCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGTCAGGTCCTGCTTGTTaGCCACCACGACGACAGGCA +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWSGPAC*PPRRQA
Trigger: TGCCTGTCGTCGTGGTGGCCAACAAGCAGGACCTGA...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGATCACCTCACCTGCCTaGCCAATGTGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWITSPA*PMWRNP
Trigger: GGGGTTTCGCCACATTGGCCAGGCAGGTGAGGTGAT...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CACGCCTTCCGGAAGGAGTTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTGTTACACGAGGTCTaGGAGACAGAGGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: HAFRKEFVTRGLRDRGSVLLHEV*ETEAAC
Trigger: ACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAA...CACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCGGAAGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR GCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATGAACGTGCTCTTGCCTaGGCCATCCAGCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: FYYYGELQKAVVAAASVDERALA*AIQPQH
Trigger: GTGCTGGGGCTGGATGGCGCAGGCAAGAGCACGTTC...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGAACACGCGCAGGAACGTaGTCTTGCCTGCGCCATCCA +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGTRAGT*SCLRHP
Trigger: TGGATGGCGCAGGCAAGAGCACGTTCCTGCGCGTGT...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGCATGGTTCTTGGCCTTaGCCAGGCCCTGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWHGSWP*PGPALE
Trigger: TTCAAGAGCAGGGCCTGGGCAAGGCCAAGAACCATG...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGCACCAGGAAGGCTTCTaGATGGTTCTTGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWHQEGF*MVLGLA
Trigger: GGCAAGGCCAAGAACCATGCAGAAGCCTTCCTGGTG...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TTCCGGAAGGAGTTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGCGGTGGTCAGCGCGATaGCCAAGGCCAAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: FRKEFVTRGLRDRGSVFERWSAR*PRPRAK
Trigger: TTTTGCCCTTGGCCTTGGGCATCGCGCTGACCACCG...CTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR CCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTGTGGCCTTCCAGCGGTaGCTTCCCCGACAACACGCG +
Preference number: 4 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTVAFQR*LPRQHA
Trigger: CGCGTGTTGTCGGGGAAGCCACCGCTGGAAGGCCAC...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp AAGGAGTTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGCTGCTGGCGTGTTTGAGCTGCTaGTGCGGTGGTCAGCGCGAT +
Preference number: 4 (lower is better)
Translates to: KEFVTRGLRDRGSVFELLACLSC*CGGQRD
Trigger: ATCGCGCTGACCACCGCACCAGCAGCTCAAACACGC...CAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR CCA 90 bp CGAACAGGAGGCTGGGGCCTCAGCACCCTCGGGAAATTGTTCAGTGTCGCTGTTTTAACATCTGCTTGTTaGCCACCACGACGACAGGCA +
Preference number: 4 (lower is better)
Translates to: RTGGWGLSTLGKLFSVAVLTSAC*PPRRQA
Trigger: TGCCTGTCGTCGTGGTGGCCAACAAGCAGATGTTAA...AACAGCGACACTGAACAATTTCCCGAGGGTGCTGAGGCCCCAGCCTCCTGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514533.1
3UTR CAA 72 bp GGCCCCCTGGTCCTTCCTGAGCCCTTGAAACTTCTATaGTTAAAAGCTTTGCACTTGGCCAGGCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: GPLVLPEPLKLL*LKALHLARHGG
Trigger: GCCACCGTGCCTGGCCAAGTGCAAAGCTTTTAACAATAGAAGTTTCAAGGGCTCAGGAAGGACCAGGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGGTCCTTCAATTGGGCTaGTCGCCAAGCACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWVLQLG*SPSTGE
Trigger: TTCTCCAGTGCTTGGCGATCAGCCCAATTGAAGGAC...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCGGCGGGTGGATCACCTaGGGTCAGGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCGGWIT*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCAGGTGATCCACCCGCC...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCCTGCCATGTGGCTCTTaGCCCAGGCCCAGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCLPCGS*PRPSLA
Trigger: TGCCAGACTGGGCCTGGGGCAAGAGCCACATGGCAG...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACTTCTGCATGGTTCTTaGCCTTGCCCAGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGLLHGS*PCPGPA
Trigger: AGCAGGGCCTGGGCAAGGCCAAGAACCATGCAGAAG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGGGATGGATGGATGGATaGATGAGGCCACCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWGWMDG*MRPPVF
Trigger: GAACACAGGTGGCCTCATCCATCCATCCATCCATCC...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGCTCAGGAGGCTGAGGTaGCAAAATCTCTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWLRRLR*QNLLCP
Trigger: AGGGCACAAGAGATTTTGCCACCTCAGCCTCCTGAG...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp AAGGAGTTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGCTGCTGGCAGAACCTGCTTGTTaGCCACCACGACGACAGGCA +
Preference number: 4 (lower is better)
Translates to: KEFVTRGLRDRGSVFELLAEPAC*PPRRQA
Trigger: TGCCTGTCGTCGTGGTGGCCAACAAGCAGGTTCTGC...CAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR TCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGCATTCCAGCCTGGAATaGGCCAGACACTATCCTCCC +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQHSSLE*ARHYPP
Trigger: GGGAGGATAGTGTCTGGCTCATTCCAGGCTGGAATG...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGGGTTGTAGTGAGCCATaGTTGCACCACTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWGCSEP*LHHCIP
Trigger: TGGAATGCAGTGGTGCAATCATGGCTCACTACAACC...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATGGTGGGAGGACTGCTTaGTCTCTGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FYYYGELQKAVVAAASVDGGRTA*SLEVEV
Trigger: AACCTCCACCTCCAGAGATCAAGCAGTCCTCCCACC...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCGCCCATTGTGCCCACTaGCCCCTCACAGCAACTGGA +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCAHCAH*PLTATG
Trigger: TCCAGTTGCTGTGAGGGGTCAGTGGGCACAATGGGC...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTGCAGGAACGTGCTCTTaGCTGCGCCATCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LAINVAYTHCGAEHSELLAGTCS*LRHPAP
Trigger: TGGGGCTGGATGGCGCAGGCAAGAGCACGTTCCTGC...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATAGGGGCAATGCTGGCTaGCAAGAGGAAAACCTCCCG +
Preference number: 4 (lower is better)
Translates to: FYYYGELQKAVVAAASVDRGNAG*QEENLP
Trigger: CGGGAGGTTTTCCTCTTGGCAGCCAGCATTGCCCCT...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATTTCAAAGGTGGGTCCTaGAGGGGCAATGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FYYYGELQKAVVAAASVDFKGGS*RGNAGC
Trigger: GCAGCCAGCATTGCCCCTGCAGGACCCACCTTTGAA...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GACGAACAGGAGGCTGGGGCCTCAGCACCCTCGGGAAATTGTTCAGTGTCGCTGTTTCATTTTAACATCTaGTTGTTGGCCACCACGACG +
Preference number: 4 (lower is better)
Translates to: DEQEAGASAPSGNCSVSLFHFNI*LLATTT
Trigger: CGTCGTGGTGGCCAACAAGCAGATGTTAAAATGAAA...CAGCGACACTGAACAATTTCCCGAGGGTGCTGAGGCCCCAGCCTCCTGTTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514533.1
CDS-3UTR CCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACACTTCACACTCCCATaGCTGGGAAAGGCATCTCCG +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGHFTLP*LGKASP
Trigger: CGGAGATGCCTTTCCCAGCCATGGGAGTGTGAAGTG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGCCAAGGCCATCCCGTTaGCTGGTCTGCTATTCCTGT +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQPRPSR*LVCYSC
Trigger: ACAGGAATAGCAGACCAGCCAACGGGATGGCCTTGG...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGAATTAGCTGGGGATGGTaGCGCACACTGGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGISWGW*RTLVVP
Trigger: TGGGACTACCAGTGTGCGCCACCATCCCCAGCTAAT...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CGGAAGGAGTTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGCTGCACATCCGACATGCCTaGGACCACGCTAAATCGGTA +
Preference number: 4 (lower is better)
Translates to: RKEFVTRGLRDRGSVFELHIRHA*DHAKSV
Trigger: TACCGATTTAGCGTGGTCCCAGGCATGTCGGATGTG...CAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR CCA 90 bp GAGAAATCAAGGACGAACAGGAGGCTGGGGCCTCAGCACCCTCGGGAAATTGTTGACTTGCACGGGGGATaGGAAGGAAGGAGAAATCAA +
Preference number: 4 (lower is better)
Translates to: EKSRTNRRLGPQHPREIVDLHGG*EGRRNQ
Trigger: TTGATTTCTCCTTCCTTCCCATCCCCCGTGCAAGTC...AACAATTTCCCGAGGGTGCTGAGGCCCCAGCCTCCTGTTCGTCCTTGATTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514533.1
3UTR CAA 72 bp CCAGAAAGGCTGAGTGATGTACCCAAGGCCATCCCGTaGGCTGGTCTGCTATTCCTGTCCTTAGGATCACAT +
Preference number: 4 (lower is better)
Translates to: PERLSDVPKAIP*AGLLFLSLGSH
Trigger: ATGTGATCCTAAGGACAGGAATAGCAGACCAGCCAACGGGATGGCCTTGGGTACATCACTCAGCCTTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCAGGTCTTCCAGAGGATaGAGAGCACCGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCRSSRG*RAPSPA
Trigger: TGCTGGGCTCGGTGCTCTTCATCCTCTGGAAGACCT...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGGTACAACTATGGTCTTaGCAGGCAGGTGGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQVQLWS*QAGGKQ
Trigger: CTGCTTGCCACCTGCCTGTCAAGACCATAGTTGTAC...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCCAGAAGCTGCCCACATaGGAAGGGCATGACGTCACC +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCQKLPT*EGHDVT
Trigger: GGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTG...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTAACACCTAGCTCCAGTTaGCTGTCGTCCCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVTPSSS*LSSQGH
Trigger: GTGTCCCTGGGACGACAGTCAACTGGAGCTAGGTGT...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGAGTCACGGTGTGGAACTaGGGCATGCTGGGTAAATGT +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGVTVWN*GMLGKC
Trigger: ACATTTACCCAGCATGCCTCAGTTCCACACCGTGAC...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGATTGCCATTATACCCTaGACAGGCTATGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWIAIIP*TGYEQQ
Trigger: CTGCTGCTCATAGCCTGTTCAGGGTATAATGGCAAT...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGTGCAGGAGAATCACTTaGACCTGGGAGGCGGAGATT +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQCRRIT*TWEAEI
Trigger: AATCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCA...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTGGTGGTGCACACCTGTaGTCGATCGCAGCTACTCGG +
Preference number: 4 (lower is better)
Translates to: LAINVAYTHCGAEHSELLGGAHL*SIAATR
Trigger: CCGAGTAGCTGCGATCGATCACAGGTGTGCACCACC...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGTGCTGGTTCCAAAGGTaGCCTTTGTTAAGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWCWFQR*PLLSLA
Trigger: GGCCAAACTTAACAAAGGTCACCTTTGGAACCAGCA...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTAGTCTTGACAGGCAGGTaGCAAGCAGGAGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVVLTGR*QAGELQ
Trigger: CTGGAGCTCTCCTGCTTGCCACCTGCCTGTCAAGAC...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTAGGCCCAGTCTGGCAATaGAGCAGCAGCAGTACAACT +
Preference number: 4 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVGPVWQ*SSSSTT
Trigger: AGTTGTACTGCTGCTGCTTCATTGCCAGACTGGGCC...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACACATGAGAAGGGCATaGCGTCACCAGACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGHMRRA*RHQTVS
Trigger: AGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCTCCAGAAAGGCTGAGTaGTGTACCCAAGGCCATCCC +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCSRKAE*CTQGHP
Trigger: GGGATGGCCTTGGGTACATCACTCAGCCTTTCTGGA...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGCACTTTCAAGAACAGTaGTTCTTCAAATGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWHFQEQ*FFKWRP
Trigger: TGGGCGCCATTTGAAGAATCACTGTTCTTGAAAGTG...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGTCTTGCTGTTTCACCTaGTTCATGCTCACCTTGCAA +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWSCCFT*FMLTLQ
Trigger: TTGCAAGGTGAGCATGAATCAGGTGAAACAGCAAGA...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGATGGGGGAACATAAGTaGCCCCTGCTCAAATGCTAC +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQMGEHK*PLLKCY
Trigger: GTAGCATTTGAGCAGGGGTCACTTATGTTCCCCCAT...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATGGCTCATGCAGCACATaGACCTGGATTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FYYYGELQKAVVAAASVDGSCST*TWIAPS
Trigger: AGAAGGAGCAATCCAGGTTCATGTGCTGCATGAGCC...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTAAGCGCAGGTTCTGGCTaGCCCCAATTTCTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVSAGSG*PQFLAG
Trigger: ACCTGCTAGAAATTGGGGGCAGCCAGAACCTGCGCT...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCGCTGGGGCTGGACAATaGAGGACAGGAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCAGAGQ*RTGTKA
Trigger: AGCCTTTGTTCCTGTCCTGCATTGTCCAGCCCCAGC...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCAGGAAGGCTTCTGCATaGTTCTTGGCCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCRKASA*FLALPR
Trigger: CCTGGGCAAGGCCAAGAACCATGCAGAAGCCTTCCT...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGAGCTGTGCAGACTTATaGGGGAACATAAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQSCADL*GNISDP
Trigger: GGGGTCACTTATGTTCCCCCATAAGTCTGCACAGCT...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CGGAAGGAGTTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGCTGCCGGAGGCAGAAGTTTaGTTACAGTGTCAACCGAAA +
Preference number: 4 (lower is better)
Translates to: RKEFVTRGLRDRGSVFELPEAEV*LQCQPK
Trigger: TTTCGGTTGACACTGTAACCAAACTTCTGCCTCCGG...CAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
3UTR CAA 72 bp GAGAGCCTAGATGGCCCCCTGGTCCTTCCTGAGCCCTaGAAACTTCTATTGTTAAAAGCTTTGCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: ESLDGPLVLPEP*KLLLLKALHLA
Trigger: GGCCAAGTGCAAAGCTTTTAACAATAGAAGTTTCAAGGGCTCAGGAAGGACCAGGGGGCCATCTAGGCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCCACTTTTGGCGGCAGTaGGGTGCCAACTGTATGGAA +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCHFWRQ*GANCME
Trigger: TTCCATACAGTTGGCACCTCACTGCCGCCAAAAGTG...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCCCCCCTGGTCCTTCCTaGGCCCTTGAAACTTCTATT +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCPPGPS*ALETSI
Trigger: AATAGAAGTTTCAAGGGCTCAGGAAGGACCAGGGGG...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTAGCTACTCGGGAGGCTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAISYSGG*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCTCAGCCTCCCGAGTAGCT...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTAGACCCAGCTCCCGCTaGAGCTCCCCCATACTCATG +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIRPSSR*SSPILM
Trigger: CATGAGTATGGGGGAGCTGCAGCGGGAGCTGGGTCT...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCAGCAGTTTCCAGATGTaGACGGTGCCAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCSSFQM*TVPGSS
Trigger: TGAAGAGCCTGGCACCGTGCACATCTGGAAACTGCT...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTAAGGGGAAAAGGGAAATaGTGCCATGTGGCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVRGKGK*CHVALA
Trigger: GGCAAGAGCCACATGGCAGCATTTCCCTTTTCCCCT...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTATCACCACTCAGAAGCTaGCCACATGAGAAGGGCATG +
Preference number: 4 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVSPLRS*PHEKGM
Trigger: CATGCCCTTCTCATGTGGGCAGCTTCTGAGTGGTGA...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGGGTCTGTGGATAATTTaGTTACTCTGTCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWGLWII*LLCPDF
Trigger: GAAGTCAGGACAGAGTAAGCAAATTATCCACAGACC...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCGTGATCTCAGCTCACTaGAACCTCTGCCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCVISAH*NLCLPS
Trigger: ACTTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCAC...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGTCTCTGTCTCTTCTTTaGCTCGATGCTTTGAGTACA +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWSLSLL*LDALST
Trigger: TGTACTCAAAGCATCGAGGCAAAGAAGAGACAGAGA...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTCTCAGGAGACTGAGGTaGGAGGACTGCTTGATCTCT +
Preference number: 4 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTLRRLR*EDCLIS
Trigger: AGAGATCAAGCAGTCCTCCCACCTCAGTCTCCTGAG...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp TACCCACACTGTGGTAAAACTTCAGGGCTTCGAACCTaGGGTCCACATCTCACAACTCAAAAGGACCTCTCC +
Preference number: 4 (lower is better)
Translates to: YPHCGKTSGLRT*GPHLTTQKDLS
Trigger: GGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGAAGCCCTGAAGTTTTACCACAGTGTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTCCCAGGCCCTGCTCTTaGAAGGCAAAGGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIPRPCS*KAKEGK
Trigger: TTTCCCCTCCTTTGCCTTTCAAGAGCAGGGCCTGGG...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCTGGACTGGGAGACCTTaGGGCTCTAGGAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCWTGRP*GSRSIS
Trigger: AGAAATACTCCTAGAGCCTCAAGGTCTCCCAGTCCA...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTACCCTGAACAGGCTATaGGCAGCAGAGCTTGCACGC +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAITLNRL*AAELAR
Trigger: GCGTGCAAGCTCTGCTGCTCATAGCCTGTTCAGGGT...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGATTGTCTCGATCTCCTaGCCTCGTGATCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKIVSIS*PRDPST
Trigger: GGTGGACGGATCACGAGGTCAGGAGATCGAGACAAT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGTTTACAAAACGCAAATaGAAGGCTCATGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWFTKRK*KAHAAH
Trigger: ATGTGCTGCATGAGCCTTTCATTTGCGTTTTGTAAA...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGGCTTTAGATTTCCTTTaGCCAGCTAGGAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQALDFL*PARSLC
Trigger: ACACAAGCTCCTAGCTGGGCAAAGGAAATCTAAAGC...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGAACACCACTACTGCTTaGTTCCCTACACTCATTGGA +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQNTTTA*FPTLIG
Trigger: TCCAATGAGTGTAGGGAAGCAAGCAGTAGTGGTGTT...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGAAAGAAAGCCAACCATTaGCTTTGGTCAGCAGATCAG +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGKKANH*LWSADQ
Trigger: CTGATCTGCTGACCAAAGGCAATGGTTGGCTTTCTT...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATAGGAAAACCTCCCGCTaGTTATCGATAGCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: FYYYGELQKAVVAAASVDRKTSR*LSIACR
Trigger: TCTACAGGCTATCGATAACCAGCGGGAGGTTTTCCT...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACAACTTGGCTTTCACTaGGGAAAAATTGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGQLGFH*GKIGSR
Trigger: TCTGGACCCAATTTTTCCCCAGTGAAAGCCAAGTTG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTTACTGGACTGGGTCCTaGATTGGACTGCATCCCATA +
Preference number: 4 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTYWTGS*IGLHPI
Trigger: TATGGGATGCAGTCCAATCCAGGACCCAGTCCAGTA...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp AGCCTCAAAGCCAGGTGGGAGGAGGAACCCACAACTTaGTCTCCACTGACATCTGTATGTTATCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: SLKARWEEEPTT*SPLTSVCYLIV
Trigger: GACAATGAGATAACATACAGATGTCAGTGGAGACAAAGTTGTGGGTTCCTCCTCCCACCTGGCTTTGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp GAAATTCAGTCCAACTTGGCTTTCACTGGGGAAAAATaGGGTCCAGAAAGGCTGAGTGATGTACCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: EIQSNLAFTGEK*GPERLSDVPKA
Trigger: GGCCTTGGGTACATCACTCAGCCTTTCTGGACCCAATTTTTCCCCAGTGAAAGCCAAGTTGGACTGAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGAAATAAAATGCAGTTCTaGGGTCAACACCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGNKMQF*GQHLAP
Trigger: TGGAGCTAGGTGTTGACCTCAGAACTGCATTTTATT...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACCATGTAAAGTACTATaGTATCGACGACAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGPCKVL*YRRQPQ
Trigger: TTGAGGCTGTCGTCGATATCATAGTACTTTACATGG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGATCTTACTGCAGAAAGTaGACCAGCACTTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGSYCRK*TSTFKN
Trigger: GTTCTTGAAAGTGCTGGTTCACTTTCTGCAGTAAGA...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGAGTATCCCAATCACCATaGCTTGTGTTACCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGVSQSP*LVLPKA
Trigger: AGCTTTTGGTAACACAAGTCATGGTGATTGGGATAC...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATTTCCTGTTGGGTTTGTaGCTTAACGCTCAAATCAGG +
Preference number: 4 (lower is better)
Translates to: FYYYGELQKAVVAAASVDFLLGL*LNAQIR
Trigger: CCTGATTTGAGCGTTAAGTCACAAACCCAACAGGAA...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGATTTCCAACTTATACTaGACCCTTCACCTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWISNLY*TLHLVC
Trigger: ACAAACAAGGTGAAGGGTTCAGTATAAGTTGGAAAT...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTGTCCTGCAGGGGCAATaGTGGCTGCCAAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIVLQGQ*WLPRGK
Trigger: TTTTCCTCTTGGCAGCCAGCATTGCCCCTGCAGGAC...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGGAGAACTATGGAATGTaGACTGATGAGAACTCCAGA +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQENYGM*TDENSR
Trigger: TCTGGAGTTCTCATCAGTGCACATTCCATAGTTCTC...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATGTGGCTCCAAGCGATTaGTTATATAATGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: FYYYGELQKAVVAAASVDVAPSD*LYNVTG
Trigger: CCCAGTGACATTATATAAGCAATCGCTTGGAGCCAC...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGTCTTCTTTGCCTCGATaGTTTGAGTACAGTAACCCT +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQSSLPR*FEYSNP
Trigger: AGGGTTACTGTACTCAAAGCATCGAGGCAAAGAAGA...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACAGGCTATCTCTGTATaGCAATTCCGTTTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGQAISV*QFRFFA
Trigger: AGCAAAGAAACGGAATTGGCATACAGAGATAGCCTG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTCCCCAGGTGGGGATGTaGCCTTCCAGCGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVPQVGM*PSSGGF
Trigger: GAAGCCACCGCTGGAAGGCCACATCCCCACCTGGGG...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTCCTGGGCCAAGTGGTaGCGTTTCAGTTCATGTGAA +
Preference number: 4 (lower is better)
Translates to: LAINVAYTHCGAEHSELLSWAKW*RFSSCE
Trigger: TTCACATGAACTGAAACGCCACCACTTGGCCCAGGA...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTACATCCTGGGCCAAGTaGTGGCGTTTCAGTTCATGT +
Preference number: 4 (lower is better)
Translates to: LAINVAYTHCGAEHSELLTSWAK*WRFSSC
Trigger: ACATGAACTGAAACGCCACCACTTGGCCCAGGATGT...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGAAATTCAGTCCAACTTaGCTTTCACTGGGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWKFSPT*LSLGKN
Trigger: ATTTTTCCCCAGTGAAAGCCAAGTTGGACTGAATTT...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTATTCCTCTTCTTACACTaGTCACGGTGTGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVFLFLH*SRCGTE
Trigger: CTCAGTTCCACACCGTGACCAGTGTAAGAAGAGGAA...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGAATCAAGGGACTGCCCTaGCAGATTTTCATGCTAAAT +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGIKGLP*QIFMLN
Trigger: ATTTAGCATGAAAATCTGCCAGGGCAGTCCCTTGAT...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGTGCAGTCCACAATTTTaGCATGTTATGGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWCSPQF*HVMETK
Trigger: CTTTGTTTCCATAACATGCCAAAATTGTGGACTGCA...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACATCCCATAATAAACTaGATGGATCCAGTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGHPIIN*MDPVRG
Trigger: GCCTCTAACTGGATCCATCCAGTTTATTATGGGATG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTAGTCCTGAGCACTACCTaGTTCATGAACCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVVLSTT*FMNPFL
Trigger: CAGAAAAGGGTTCATGAACCAGGTAGTGCTCAGGAC...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTGCAGACGCACGGAGTTaGAGCCCCAGGTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVADARS*SPRWGC
Trigger: ACATCCCCACCTGGGGCTTCAACTCCGTGCGTCTGC...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTCGCCCGGCCCCCATTTaGAATTATTCTTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LAINVAYTHCGAEHSELLRPAPI*NYSLAK
Trigger: TTTTGCCAAAGAATAATTTCAAATGGGGGCCGGGCG...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTGTGAAGCTTGAAAATTaGCAGCAGGAGCAGAATGGC +
Preference number: 4 (lower is better)
Translates to: LAINVAYTHCGAEHSELLVKLEN*QQEQNG
Trigger: GCCATTCTGCTCCTGCTGTCAATTTTCAAGCTTCAC...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGTTGAGCTCACAAGTTTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKLSSQV*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAAACTTGTGAGCTCAA...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGGGCAGGAAGATCTCTTaGGCTCACAAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKGRKIS*AHKFET
Trigger: GGTCTCAAACTTGTGAGCTCAAGAGATCTTCCTGCC...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCATTTCCCACCCTCCTTaGGGCTTGTTGAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCISHPP*GLLNCF
Trigger: AAAACAGTTCAACAAGCCGCAAGGAGGGTGGGAAAT...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTAACATAAGTGACCCCTaGTCAAATGCTACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LAINVAYTHCGAEHSELLNISDP*SNATRW
Trigger: CCACCTGGTAGCATTTGAGCAGGGGTCACTTATGTT...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTCTATGCAAGGAACACTaGCTACACCTATGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTLCKEH*LHLCFQ
Trigger: CTGAAAGCATAGGTGTAGGCAGTGTTCCTTGCATAG...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTCACATGAACCTGGATTaGTCCTTCTCTGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTHMNLD*SFSVSS
Trigger: AGAAGAGACAGAGAAGGAGCAATCCAGGTTCATGTG...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTCACAAGTCACTTAGGTaGAGCTGGGGCTGGACAATG +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIHKSLR*SWGWTM
Trigger: CATTGTCCAGCCCCAGCTCCACCTAAGTGACTTGTG...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGTCACACTCCCATGGCTaGGAAAGGCATCTCCGAATT +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKSHSHG*ERHLRI
Trigger: AATTCGGAGATGCCTTTCCCAGCCATGGGAGTGTGA...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTTCAAATGCTACCAGGTaGCCCCCACTTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAISNATR*PPLSSF
Trigger: GAAGCTGGAAAGTGGGGGCCACCTGGTAGCATTTGA...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGACAGCAGGAGCAGAATaGCAACAGCCTGAGGATACT +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKTAGAE*QQPEDT
Trigger: AGTATCCTCAGGCTGTTGCCATTCTGCTCCTGCTGT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATCAACTTTGTCTCCACTaGCATCTGTATGTTATCTCA +
Preference number: 4 (lower is better)
Translates to: FYYYGELQKAVVAAASVDQLCLH*HLYVIS
Trigger: TGAGATAACATACAGATGTCAGTGGAGACAAAGTTG...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGATGGAAAAATCTCCAGTaGCAGAGGAACTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGWKNLQ*QRNSFY
Trigger: ATAAAATGAGTTCCTCTGTCACTGGAGATTTTTCCA...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTACTCAAGAACATAGTTaGCCCAGCACTTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAITQEHS*PSTLGG
Trigger: GCCTCCCAAAGTGCTGGGTCAACTATGTTCTTGAGT...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGACAGGAACAAAGGCTTaGTGTGTCACCACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKTGTKA*CVTTQK
Trigger: CTTCTGAGTGGTGACACAGCAAGCCTTTGTTCCTGT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTCGCTTCTGTAGATACTaGCACCAAACACATCAAGGA +
Preference number: 4 (lower is better)
Translates to: LAINVAYTHCGAEHSELLRFCRY*HQTHQG
Trigger: TCCTTGATGTGTTTGGTGGCAGTATCTACAGAAGCG...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGAAACTGCAGAACTTTTaGTCTCACTTGAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQKLQNF*SHLSLS
Trigger: TGATAAGCTCAAGTGAGAGCAAAAGTTCTGCAGTTT...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTCTGAGATTACACCACTaGACTCCAGCTTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAILRLHH*TPAWAR
Trigger: TCTTGCCCAAGCTGGAGTGCAGTGGTGTAATCTCAG...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGCTTATAAATATAGCCTaGACACATTCTGAACCATCG +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQLINIA*THSEPS
Trigger: CGATGGTTCAGAATGTGTGCAGGCTATATTTATAAG...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCTCTATGACTGTCATCTaGGGTTTTGAAAACAGCACC +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCSMTVI*GFENST
Trigger: GGTGCTGTTTTCAAAACCCCAGATGACAGTCATAGA...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCCTGATTCTACTACTATaGAGAGCTTCAAAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCLILLL*RASKGG
Trigger: ACCGCCTTTTGAAGCTCTCCATAGTAGTAGAATCAG...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTACCTCTCCAGACTCCTaGAACTACACACCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAITSPDS*NYTPVG
Trigger: TCCAACAGGTGTGTAGTTCCAGGAGTCTGGAGAGGT...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCTCACCCTCAGTCTTCTaGAAAGGTCAAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCSPSVF*KGQKDK
Trigger: TTTGTCCTTTTGACCTTTCCAGAAGACTGAGGGTGA...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp TGTGCACTGATGAGAACTCCAGAAATTCAGTCCAACTaGGCTTTCACTGGGGAAAAATTGGGTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: CALMRTPEIQSN*AFTGEKLGPER
Trigger: CCTTTCTGGACCCAATTTTTCCCCAGTGAAAGCCAAGTTGGACTGAATTTCTGGAGTTCTCATCAGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp CAAGTGGTGTATTTCCACCAACACCTGATGGACCATTaGAACGCTTACAGATGGACTTCATTCAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: QVVYFHQHLMDH*NAYRWTSFNCH
Trigger: GTGGCAGTTGAATGAAGTCCATCTGTAAGCGTTCAAATGGTCCATCAGGTGTTGGTGGAAATACACCACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTAGAGTAACAGAAACATaGAGACATACAGAATCCGCT +
Preference number: 4 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTRVTET*RHTESA
Trigger: AGCGGATTCTGTATGTCTTCATGTTTCTGTTACTCT...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTTGTGCTTATCTTTCCTaGTTCTACTACTATGGAGAG +
Preference number: 4 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTCAYLS*FYYYGE
Trigger: CTCTCCATAGTAGTAGAATCAGGAAAGATAAGCACA...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATGGTCAAAGACTAAAATaGATACCAACCTTGAAACAG +
Preference number: 4 (lower is better)
Translates to: FYYYGELQKAVVAAASVDGQRLK*IPTLKQ
Trigger: CTGTTTCAAGGTTGGTATTCATTTTAGTCTTTGACC...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATTTGGAAGTGGTACCCTaGCCTTTTCAATTAATAAGT +
Preference number: 4 (lower is better)
Translates to: FYYYGELQKAVVAAASVDLEVVP*PFQLIS
Trigger: ACTTATTAATTGAAAAGGTCAGGGTACCACTTCCAA...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGTACCCAGAAGGAATTTaGACCCTTTCAACATCCTGG +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKYPEGI*TLSTSW
Trigger: CCAGGATGTTGAAAGGGTGCAAATTCCTTCTGGGTA...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGCACTGCCTACACCTATaGTTTCAGGCACCACATATT +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKHCLHL*FQAPHI
Trigger: AATATGTGGTGCCTGAAAGCATAGGTGTAGGCAGTG...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTCTAAACACCACTACTaGTTGCTTCCCTACACTCAT +
Preference number: 4 (lower is better)
Translates to: LAINVAYTHCGAEHSELLSKHHY*LLPYTH
Trigger: ATGAGTGTAGGGAAGCAAGCAGTAGTGGTGTTTAGA...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTTGGACTTCATTCAACTaGCACCCTCAATTAAGTATC +
Preference number: 4 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTWTSFN*HPQLSI
Trigger: GATACTTAATTGAGGGTGGCAGTTGAATGAAGTCCA...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTCCACCTCAAAGTCCTTaGTGGGCAGACGCACGGAGT +
Preference number: 4 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVPPQSP*WADARS
Trigger: ACTCCGTGCGTCTGCCCACCAAGGACTTTGAGGTGG...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGAACTGGAGTTCCTGTTaGGTTTGTGACTTAACGCTC +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKNWSSC*VCDLTL
Trigger: GAGCGTTAAGTCACAAACCCAACAGGAACTCCAGTT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTGCCAACCATTGCCTTTaGTCAGCAGATCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIANHCL*SADQIH
Trigger: ATGGATCTGATCTGCTGACCAAAGGCAATGGTTGGC...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTGTGTTAGAAACACAGTaGTACTACCATTGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTVLETQ*YYHCPF
Trigger: AAAGGGACAATGGTAGTACCACTGTGTTTCTAACAC...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATGTTGCCATCACAAATTaGTATAAGTTCCAAGCTATC +
Preference number: 4 (lower is better)
Translates to: FYYYGELQKAVVAAASVDVAITN*YKFQAI
Trigger: GATAGCTTGGAACTTATACCAATTTGTGATGGCAAC...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGAATTTTGGCATGTTATaGAAACAAAGAGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQNFGML*KQRGFL
Trigger: GAGAAACCCTCTTTGTTTCCATAACATGCCAAAATT...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTGCCCATCACATATCATaGCCTGCAATTAGACCCCAT +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIAHHIS*PAIRPH
Trigger: ATGGGGTCTAATTGCAGGCCATGATATGTGATGGGC...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp CCTGAACAGGCTATGAGCAGCAGAGCTTGCACGCTGTaGAACTATTTTTATCGTCTGAACTTGAGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: PEQAMSSRACTL*NYFYRLNLSCL
Trigger: CAAACAACTCAAGTTCAGACGATAAAAATAGTTCAACAGCGTGCAAGCTCTGCTGCTCATAGCCTGTTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTATGGGTAAATGTCAAATaGAATGAAGGCACACAATCT +
Preference number: 4 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVWVNVK*NEGTQS
Trigger: AGATTGTGTGCCTTCATTTCATTTGACATTTACCCA...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTAAAATAAACTTTCTGTaGCCCACAGAGGACCATCAA +
Preference number: 4 (lower is better)
Translates to: LAINVAYTHCGAEHSELLKINFL*PTEDHQ
Trigger: TTGATGGTCCTCTGTGGGTCACAGAAAGTTTATTTT...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGACAGACTCAAGTGGATaGACTTGCTACTATCCTGTT +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKTDSSG*TCYYPV
Trigger: AACAGGATAGTAGCAAGTTCATCCACTTGAGTCTGT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTAAAGGCGGTGGTGGCTaGCGCTTCTGTAGATACTGC +
Preference number: 4 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVKGGGG*RFCRYC
Trigger: GCAGTATCTACAGAAGCGGCAGCCACCACCGCCTTT...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGCAGAGCCTAGAACTCTaGCCTGTTCTGCTTATAAAT +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKQSLEL*PVLLIN
Trigger: ATTTATAAGCAGAACAGGCCAGAGTTCTAGGCTCTG...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTGCATTCCAGTTTCTTaGTATTACACTCCTGATAGC +
Preference number: 4 (lower is better)
Translates to: LAINVAYTHCGAEHSELLCIPVS*YYTPDS
Trigger: GCTATCAGGAGTGTAATACCAAGAAACTGGAATGCA...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTCATGTGTTTCCTTTATaGGGCATCTCTGGAAAAATC +
Preference number: 4 (lower is better)
Translates to: LAINVAYTHCGAEHSELLHVFPL*GISGKI
Trigger: GATTTTTCCAGAGATGCCCCATAAAGGAAACACATG...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCAAAAACAGACTCAAGTaGATGAACTTGCTACTATCC +
Preference number: 4 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCKNRLK*MNLLLS
Trigger: GGATAGTAGCAAGTTCATCCACTTGAGTCTGTTTTT...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTAATACAAAAATTAGCTaGGCGGTGGTGCACACCTGT +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAINTKIS*AVVHTC
Trigger: ACAGGTGTGCACCACCGCCCAGCTAATTTTTGTATT...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp CTGGACTTCAGAATTTCCCACCCTCCTTGCGGCTTGTaGAACTGTTTTTATCATAGTTCCTCTTCTTACACT +
Preference number: 4 (lower is better)
Translates to: LDFRISHPPCGL*NCFYHSSSSYT
Trigger: AGTGTAAGAAGAGGAACTATGATAAAAACAGTTCAACAAGCCGCAAGGAGGGTGGGAAATTCTGAAGTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp CTTCTGGACTTCAGAATTTCCCACCCTCCTTGCGGCTaGTTGAACTGTTTTTATCATAGTTCCTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LLDFRISHPPCG*LNCFYHSSSSY
Trigger: GTAAGAAGAGGAACTATGATAAAAACAGTTCAACAAGCCGCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTCTCTTAGCCTTCCAATaGCAAAATGAAAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAILLAFQ*QNEKLP
Trigger: TGGCAGCTTTTCATTTTGTCATTGGAAGGCTAAGAG...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTGGAAAAGGGAAATGCTaGCATGTGGCTCTTGCCCCA +
Preference number: 4 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVGKGKC*HVALAP
Trigger: TGGGGCAAGAGCCACATGGCAGCATTTCCCTTTTCC...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTATGAGCAGCAGAGCTTaGACGCTGTTGAACTATTTT +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIMSSRA*TLLNYF
Trigger: AAAATAGTTCAACAGCGTGCAAGCTCTGCTGCTCAT...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTATATATACATGCCTTTaGAGTCCACAATTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTIYTCL*SPQFWH
Trigger: ATGCCAAAATTGTGGACTGCAAAGGCATGTATATAT...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTTGGCAAAATCTCTTGTaGCCTGGAGGCAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVWQNLL*PGGRGC
Trigger: GCAACCTCTGCCTCCAGGGCACAAGAGATTTTGCCA...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGAGTTGGCATGTTTTCTaGTTGGATAGAAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKSWHVF*LDRSFP
Trigger: AGGAAAGCTTCTATCCAACCAGAAAACATGCCAACT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp TACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTaGGTGCTAAGTACTAACCAGTTCACGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: YTHCGAEHSELL*VLSTNQFTNLF
Trigger: AAAAAGATTCGTGAACTGGTTAGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp CCAGTCAGGCTATCTCTGTATGCCAATTCCGTTTCTTaGCTTATAAATATAGCCTGCACACATTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: PVRLSLYANSVS*LINIACTHSEP
Trigger: TGGTTCAGAATGTGTGCAGGCTATATTTATAAGCAAAGAAACGGAATTGGCATACAGAGATAGCCTGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGTTAGGATGTGCAAATTaGATGAATGCCACTAGATTG +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKLGCAN*MNATRL
Trigger: CAATCTAGTGGCATTCATTCAATTTGCACATCCTAA...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGGCAATGCACCTGATGTaGAAAACCAAAATTGTTATC +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKAMHLM*KTKIVI
Trigger: GATAACAATTTTGGTTTTCCACATCAGGTGCATTGC...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGAGGAACTCATTTTATTaGACAAACTATGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKRNSFY*TNYEAA
Trigger: AGCTGCTTCATAGTTTGTCCAATAAAATGAGTTCCT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTAATCAGTTTGGTTTGTaGAGACTCATATTAAGGGAT +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAINQFGL*RLILRD
Trigger: ATCCCTTAATATGAGTCTCCACAAACCAAACTGATT...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CCA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTGAGGTGCCAACTGTATaGAAATTAAAGTTAATGCTA +
Preference number: 4 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIEVPTV*KLKLML
Trigger: TAGCATTAACTTTAATTTCCATACAGTTGGCACCTC...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp CACGCTGTTGAACTATTTTTATCGTCTGAACTTGAGTaGTTTGATTCCAATCAGTTTGGTTTGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: HAVELFLSSELE*FDSNQFGLWRL
Trigger: GAGTCTCCACAAACCAAACTGATTGGAATCAAACAACTCAAGTTCAGACGATAAAAATAGTTCAACAGCGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR GCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTGTTTCACCTGATTCATaGTCACCTTGCAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVVSPDS*SPCKQL
Trigger: AAGCTGTTTGCAAGGTGAGCATGAATCAGGTGAAAC...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp TCTGAACTTGAGTTGTTTGATTCCAATCAGTTTGGTTaGTGGAGACTCATATTAAGGGATGCATTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SELELFDSNQFG*WRLILRDAFQF
Trigger: AAACTGGAATGCATCCCTTAATATGAGTCTCCACAAACCAAACTGATTGGAATCAAACAACTCAAGTTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
3UTR CAA 72 bp GCTATGTATATATACATGCCTTTGCAGTCCACAATTTaGGCATGTTATGGAAACAAAGAGGGTTTCTCACTT +
Preference number: 4 (lower is better)
Translates to: AMYIYMPLQSTI*ACYGNKEGFSL
Trigger: AAGTGAGAAACCCTCTTTGTTTCCATAACATGCCAAAATTGTGGACTGCAAAGGCATGTATATATACATAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR TCA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTCTCCTTGCGGCTTGTTaGACTGTTTTTATCATAGTT +
Preference number: 4 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVLLAAC*TVFIIV
Trigger: AACTATGATAAAAACAGTTCAACAAGCCGCAAGGAG...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS GCA 90 bp GGGCCCAGCGGCCGCGGCGCCATCGGGCCGGGCGAGGGACGCAGGTaGGGGTTGCACAGGCCGAGCCCACTCGCCCGCCGAAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: GPSGRGAIGPGEGRR*GLHRPSPLARRRWP
Trigger: GGGCCATCTTCGGCGGGCGAGTGGGCTCGGCCTGTGCAACCCGCACCTGCGTCCCTCGCCCGGCCCGATGGCGCCGCGGCCGCTGGGCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS GCA 90 bp GCCACCACGACGACAGGCAGGTCAGGGTCCTTGTCCAGCAGCTTGTaGAGCTCCTGTCGGGCCCAGGGCAGCCGCAGTCGGTCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: ATTTTGRSGSLSSSL*SSCRAQGSRSRSAE
Trigger: CTCGGCTGACCGACTGCGGCTGCCCTGGGCCCGACAGGAGCTGCACAAGCTGCTGGACAAGGACCCTGACCTGCCTGTCGTCGTGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310389.6
ENST00000507151.1
ENST00000514533.1
CDS GCA 90 bp TGTGGCCTTCCAGCGGTGGCTTCCCCGACAACACGCGCAGGAACGTaGTCTTGCCTGCGCCATCCAGCCCCAGCACCAGCACCTCGCGCT +
Preference number: 5 (lower is better)
Translates to: CGLPAVASPTTRAGT*SCLRHPAPAPAPRA
Trigger: AGCGCGAGGTGCTGGTGCTGGGGCTGGATGGCGCAGGCAAGAGCACGTTCCTGCGCGTGTTGTCGGGGAAGCCACCGCTGGAAGGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS CCA 90 bp ATGGGCCCAGGCAGCGCTCCTTGCCCCTGCCCAAGCATCTCTGAGTaGATGTCACCTGGACCGAGCTGCCCTCTCACAGCCCTCACCTGC +
Preference number: 5 (lower is better)
Translates to: MGPGSAPCPCPSISE*MSPGPSCPLTALTC
Trigger: GCAGGTGAGGGCTGTGAGAGGGCAGCTCGGTCCAGGTGACATCCACTCAGAGATGCTTGGGCAGGGGCAAGGAGCGCTGCCTGGGCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS GCA 90 bp GAGTGGATGTCACCTGGACCGAGCTGCCCTCTCACAGCCCTCACCTaGTTGTTGGCCACCACGACGACAGGCAGGTCAGGGTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: EWMSPGPSCPLTALT*LLATTTTGRSGSLS
Trigger: GGACAAGGACCCTGACCTGCCTGTCGTCGTGGTGGCCAACAAGCAGGTGAGGGCTGTGAGAGGGCAGCTCGGTCCAGGTGACATCCACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS CCA 90 bp GGTCCTGCAGGGGCAATGCTGGCTGCCAAGAGGAAAACCTCCCGCTaGTTATCGATAGCCTGTAGACCCAGCTCCCGCTGCAGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GPAGAMLAAKRKTSR*LSIACRPSSRCSSP
Trigger: GGGGGAGCTGCAGCGGGAGCTGGGTCTACAGGCTATCGATAACCAGCGGGAGGTTTTCCTCTTGGCAGCCAGCATTGCCCCTGCAGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS CCA 90 bp TGTCACCTGGACCGAGCTGCCCTCTCACAGCCCTCACCTGCTTGTTaGCCACCACGACGACAGGCAGGTCAGGGTCCTTGTCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: CHLDRAALSQPSPAC*PPRRQAGQGPCPAA
Trigger: AGCTGCTGGACAAGGACCCTGACCTGCCTGTCGTCGTGGTGGCCAACAAGCAGGTGAGGGCTGTGAGAGGGCAGCTCGGTCCAGGTGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS GCA 90 bp TGCCCCTGCCCAAGCATCTCTGAGTGGATGTCACCTGGACCGAGCTaGCCTCTCACAGCCCTCACCTGCTTGTTGGCCACCACGACGACA +
Preference number: 5 (lower is better)
Translates to: CPCPSISEWMSPGPS*PLTALTCLLATTTT
Trigger: TGTCGTCGTGGTGGCCAACAAGCAGGTGAGGGCTGTGAGAGGGCAGCTCGGTCCAGGTGACATCCACTCAGAGATGCTTGGGCAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS-3UTR CAA 90 bp GTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGCTGCTGGTGCGGTGGGGCAGAACCTGCTTGTaGGCCACCACGACGACAGGC +
Preference number: 5 (lower is better)
Translates to: VTRGLRDRGSVFELLVRWGRTCL*ATTTTG
Trigger: GCCTGTCGTCGTGGTGGCCAACAAGCAGGTTCTGCC...CCACCGCACCAGCAGCTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS GCA 90 bp GACAGAGGCAGCGTGTTTGAGCTGCTGGTGCGGTGGTCAGCGCGATaGCCAAGGCCAAGGGCAAAACCCGGAGGCAGAAGTTTGGTTACA +
Preference number: 5 (lower is better)
Translates to: DRGSVFELLVRWSAR*PRPRAKPGGRSLVT
Trigger: TGTAACCAAACTTCTGCCTCCGGGTTTTGCCCTTGGCCTTGGGCATCGCGCTGACCACCGCACCAGCAGCTCAAACACGCTGCCTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS GCA 90 bp CAGTTTCCAGATGTGCACGGTGCCAGGCTCTTCAAAGGTGGGTCCTaGAGGGGCAATGCTGGCTGCCAAGAGGAAAACCTCCCGCTGGTT +
Preference number: 5 (lower is better)
Translates to: QFPDVHGARLFKGGS*RGNAGCQEENLPLV
Trigger: AACCAGCGGGAGGTTTTCCTCTTGGCAGCCAGCATTGCCCCTGCAGGACCCACCTTTGAAGAGCCTGGCACCGTGCACATCTGGAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS GCA 90 bp GCAGAAGTTTGGTTACAGTGTCAACCGAAAGCGTCTGAACCGGAATaGTCGACGGAAGGCAGCGCCGCGGATCGAATGGTGAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: AEVWLQCQPKASEPE*STEGSAADRMVRGL
Trigger: CAGCCCCCTCACCATTCGATCCGCGGCGCTGCCTTCCGTCGAGCATTCCGGTTCAGACGCTTTCGGTTGACACTGTAACCAAACTTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS CCA 90 bp CCAAGAGCAGTTTCCAGATGTGCACGGTGCCAGGCTCTTCAAAGGTaGGTCCTGCAGGGGCAATGCTGGCTGCCAAGAGGAAAACCTCCC +
Preference number: 5 (lower is better)
Translates to: PRAVSRCARCQALQR*VLQGQCWLPRGKPP
Trigger: GGGAGGTTTTCCTCTTGGCAGCCAGCATTGCCCCTGCAGGACCCACCTTTGAAGAGCCTGGCACCGTGCACATCTGGAAACTGCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS CCA 90 bp TCCGCGATGTCTCTCTTTGCCGGTAGCTCCCACATCCGACATGCCTaGGACCACGCTAAATCGGTACGGCAGAACCTGCTTGTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SAMSLFAGSSHIRHA*DHAKSVRQNLLVGH
Trigger: GTGGCCAACAAGCAGGTTCTGCCGTACCGATTTAGCGTGGTCCCAGGCATGTCGGATGTGGGAGCTACCGGCAAAGAGAGACATCGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR CAA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGCTCAGGTCCTGCTTGTaGGCCACCACGACGACAGGC +
Preference number: 5 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWLRSCL*ATTTTG
Trigger: GCCTGTCGTCGTGGTGGCCAACAAGCAGGACCTGAG...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CACGCCTTCCGGAAGGAGTTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGCCGCGATGTCTCTCTTaGCCGGTAGCTCCCACATCC +
Preference number: 5 (lower is better)
Translates to: HAFRKEFVTRGLRDRGSVPRCLS*PVAPTS
Trigger: GGATGTGGGAGCTACCGGCAAAGAGAGACATCGCGG...CACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCGGAAGGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS TCA 90 bp CAGGCCCAGTCTGGCAATGAAGCAGCAGCAGTACAACTATGGTCTTaGCAGGCAGGTGGCAAGCAGGAGAGCTCCAGCCTAGGAGAGGAG +
Preference number: 5 (lower is better)
Translates to: QAQSGNEAAAVQLWS*QAGGKQESSSLGEE
Trigger: CTCCTCTCCTAGGCTGGAGCTCTCCTGCTTGCCACCTGCCTGTCAAGACCATAGTTGTACTGCTGCTGCTTCATTGCCAGACTGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS CCA 90 bp CAGCGCGATGCCCAAGGCCAAGGGCAAAACCCGGAGGCAGAAGTTTaGTTACAGTGTCAACCGAAAGCGTCTGAACCGGAATGCTCGACG +
Preference number: 5 (lower is better)
Translates to: QRDAQGQGQNPEAEV*LQCQPKASEPECST
Trigger: CGTCGAGCATTCCGGTTCAGACGCTTTCGGTTGACACTGTAACCAAACTTCTGCCTCCGGGTTTTGCCCTTGGCCTTGGGCATCGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR CAA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATCGCAGGAACGTGCTCTaGCCTGCGCCATCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: FYYYGELQKAVVAAASVDRRNVL*PAPSSP
Trigger: GGGGCTGGATGGCGCAGGCAAGAGCACGTTCCTGCG...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TGTGCACGCCTTCCGGAAGGAGTTTGTTACACGAGGTCTGAGAGACAGAGGCAGACAGAGGCAGCGTGTTaGAGCTGCTGGTGCGGTGGT +
Preference number: 5 (lower is better)
Translates to: CARLPEGVCYTRSERQRQTEAAC*SCWCGG
Trigger: ACCACCGCACCAGCAGCTCAAACACGCTGCCTCTGT...CTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCGGAAGGCGTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR CAA 90 bp GGAAGGAAGGAGAAATCAAGGACGAACAGGAGGCTGGGGCCTCAGCACCCTCGGTTTAACATCTGCTTGTaGGCCACCACGACGACAGGC +
Preference number: 5 (lower is better)
Translates to: GRKEKSRTNRRLGPQHPRFNICL*ATTTTG
Trigger: GCCTGTCGTCGTGGTGGCCAACAAGCAGATGTTAAA...CCGAGGGTGCTGAGGCCCCAGCCTCCTGTTCGTCCTTGATTTCTCCTTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514533.1
CDS TCA 90 bp AAACCCGGAGGCAGAAGTTTGGTTACAGTGTCAACCGAAAGCGTCTaGACCGGAATGCTCGACGGAAGGCAGCGCCGCGGATCGAATGGT +
Preference number: 5 (lower is better)
Translates to: KPGGRSLVTVSTESV*TGMLDGRQRRGSNG
Trigger: ACCATTCGATCCGCGGCGCTGCCTTCCGTCGAGCATTCCGGTTCAGACGCTTTCGGTTGACACTGTAACCAAACTTCTGCCTCCGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR CAA 90 bp GCACGCCTTCCGGAAGGAGTTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTCCCGGAGGCAGAAGTTaGGTTACAGTGTCAACCGAA +
Preference number: 5 (lower is better)
Translates to: ARLPEGVCYTRSERQRQRPGGRS*VTVSTE
Trigger: TTCGGTTGACACTGTAACCAAACTTCTGCCTCCGGG...ACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCGGAAGGCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR CAA 90 bp ACGAACAGGAGGCTGGGGCCTCAGCACCCTCGGGAAATTGTTCAGTGTCGCTGTAGCACCCTCGGGAAATaGTTCAGTGTCGCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: TNRRLGPQHPREIVQCRCSTLGK*FSVAVF
Trigger: GAAAACAGCGACACTGAACAATTTCCCGAGGGTGCT...ACAGCGACACTGAACAATTTCCCGAGGGTGCTGAGGCCCCAGCCTCCTGTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514533.1
CDS-3UTR CAA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGACCTGTAGTGGAGGATaGAGCCCACTGAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWTCSGG*SPLSIS
Trigger: TGAGATGCTCAGTGGGCTCAATCCTCCACTACAGGT...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TTCCGGAAGGAGTTTGTTACACGAGGTCTGAGAGACAGAGGCAGCGTGTTTGAGTACGGCAGAACCTGCTaGTTGGCCACCACGACGACA +
Preference number: 5 (lower is better)
Translates to: FRKEFVTRGLRDRGSVFEYGRTC*LATTTT
Trigger: TGTCGTCGTGGTGGCCAACAAGCAGGTTCTGCCGTA...CTCAAACACGCTGCCTCTGTCTCTCAGACCTCGTGTAACAAACTCCTTCCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS-3UTR CAA 90 bp ACGAACAGGAGGCTGGGGCCTCAGCACCCTCGGGAAATTGTTCAGTGTCGCTGTCATTTTAACATCTGCTaGTTGGCCACCACGACGACA +
Preference number: 5 (lower is better)
Translates to: TNRRLGPQHPREIVQCRCHFNIC*LATTTT
Trigger: TGTCGTCGTGGTGGCCAACAAGCAGATGTTAAAATG...ACAGCGACACTGAACAATTTCCCGAGGGTGCTGAGGCCCCAGCCTCCTGTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514533.1
CDS-3UTR CAA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCTCGCTCAGGTCCTGCTaGTTGGCCACCACGACGACA +
Preference number: 5 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCSLRSC*LATTTT
Trigger: TGTCGTCGTGGTGGCCAACAAGCAGGACCTGAGCGA...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTGCTGCCATGTGGCTCTaGCCCCAGGCCCAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIAAMWL*PQAQSG
Trigger: GCCAGACTGGGCCTGGGGCAAGAGCCACATGGCAGC...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGGACAGGAACAAAGGCTaGCTGTGTCACCACTCAGAA +
Preference number: 5 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWDRNKG*LCHHSE
Trigger: TTCTGAGTGGTGACACAGCAAGCCTTTGTTCCTGTC...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTACCTGCGGACTCACTTTaGGCGGCAGTGAGGTGCCAA +
Preference number: 5 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVPADSL*AAVRCQ
Trigger: TTGGCACCTCACTGCCGCCAAAAGTGAGTCCGCAGG...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGAGCTGGACTGACAGCTaGAGCCCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQSWTDS*SPGVQD
Trigger: GTCTTGAACTCCTGGGCTCAAGCTGTCAGTCCAGCT...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGAAGGTGGCAAAATCTCTaGTGCCCTGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGRWQNL*CPGGRG
Trigger: ACCTCTGCCTCCAGGGCACAAGAGATTTTGCCACCT...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTGGCAGACGCACGGAGTaGAAGCCCCAGGTGGGGATG +
Preference number: 5 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIGRRTE*KPQVGM
Trigger: CATCCCCACCTGGGGCTTCAACTCCGTGCGTCTGCC...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGCACCTGATGGACCATTaGAACGCTTACAGATGGACT +
Preference number: 5 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWHLMDH*NAYRWT
Trigger: AGTCCATCTGTAAGCGTTCAAATGGTCCATCAGGTG...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCCCTGGGAGGCGGAGATaGCAGCGAGCTGAGATTACA +
Preference number: 5 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCPGRRR*QRAEIT
Trigger: TGTAATCTCAGCTCGCTGCAATCTCCGCCTCCCAGG...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACTTGAGCTCACAAGTTaGAGACCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGLELTS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCAAACTTGTGAGCTCAAG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGATCTGCCAGGGCCCATaGTGCCCACTGACCCCTCAC +
Preference number: 5 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKICQGP*CPLTPH
Trigger: GTGAGGGGTCAGTGGGCACAATGGGCCCTGGCAGAT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTGCTTCTGCATGGTTCTaGGCCTTGCCCAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIASAWF*ALPRPC
Trigger: GCAGGGCCTGGGCAAGGCCAAGAACCATGCAGAAGC...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGCTTTGCCTCGATGCTTaGAGTACAGTAACCCTTTTG +
Preference number: 5 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWLCLDA*STVTLL
Trigger: CAAAAGGGTTACTGTACTCAAAGCATCGAGGCAAAG...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGCCCAATCACCATGACTaGTGTTACCAAAAGCTAACT +
Preference number: 5 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWPNHHD*CYQKLT
Trigger: AGTTAGCTTTTGGTAACACAAGTCATGGTGATTGGG...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATACAGTGGTACTACCATaGTCCCTTTCACCCTCAGTC +
Preference number: 5 (lower is better)
Translates to: FYYYGELQKAVVAAASVDTVVLP*SLSPSV
Trigger: GACTGAGGGTGAAAGGGACAATGGTAGTACCACTGT...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATGCACATGAACCTGGATaGCTCCTTCTCTGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: FYYYGELQKAVVAAASVDAHEPG*LLLCLF
Trigger: GAAGAGACAGAGAAGGAGCAATCCAGGTTCATGTGC...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTAGTACAACTATGGTCTaGACAGGCAGGTGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTSTTMV*TGRWQA
Trigger: TGCTTGCCACCTGCCTGTCAAGACCATAGTTGTACT...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGTTCTCTGTCTCTTCTTaGCCTCGATGCTTTGAGTAC +
Preference number: 5 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQFSVSS*PRCFEY
Trigger: GTACTCAAAGCATCGAGGCAAAGAAGAGACAGAGAA...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTATTCACTGGGGAAAAATaGGGTCCAGAAAGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVFTGEK*GPERLS
Trigger: ACTCAGCCTTTCTGGACCCAATTTTTCCCCAGTGAA...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TTCTACTACTATGGAGAGCTTCAAAAGGCGGTGGTGGCTGCCGCTTCTGTAGATCACCCTCCTTGCGGCTaGTTGAACTGTTTTTATCAT +
Preference number: 5 (lower is better)
Translates to: FYYYGELQKAVVAAASVDHPPCG*LNCFYH
Trigger: ATGATAAAAACAGTTCAACAAGCCGCAAGGAGGGTG...ATCTACAGAAGCGGCAGCCACCACCGCCTTTTGAAGCTCTCCATAGTAGTAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCAATTTCCCACCCTCCTaGCGGCTTGTTGAACTGTTT +
Preference number: 5 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCNFPPS*RLVELF
Trigger: AAACAGTTCAACAAGCCGCAAGGAGGGTGGGAAATT...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CCACTCAGAAGCTGCCCACATGAGAAGGGCATGACGTCACCAGACTGTTTCTGGTCGTCTGAACTTGAGTaGTTTGATTCCAATCAGTTT +
Preference number: 5 (lower is better)
Translates to: PLRSCPHEKGMTSPDCFWSSELE*FDSNQF
Trigger: AAACTGATTGGAATCAAACAACTCAAGTTCAGACGA...CCAGAAACAGTCTGGTGACGTCATGCCCTTCTCATGTGGGCAGCTTCTGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTAGCCAACCATTGCCTTaGGTCAGCAGATCAGATCCA +
Preference number: 5 (lower is better)
Translates to: LAINVAYTHCGAEHSELLSQPLP*VSRSDP
Trigger: TGGATCTGATCTGCTGACCAAAGGCAATGGTTGGCT...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTGAAGAAAGCCAACCATaGCCTTTGGTCAGCAGATCA +
Preference number: 5 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTEESQP*PLVSRS
Trigger: TGATCTGCTGACCAAAGGCAATGGTTGGCTTTCTTC...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGATGCAGGAGAATCACTaGAACCTGGGAGGCGGAGAT +
Preference number: 5 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKMQENH*NLGGGD
Trigger: ATCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCAT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TCGAACCTTGGGTCCACATCTCACAACTCAAAAGGACCTCTCCAGACTCCTGGACTGAGCTCCATAAATTaGTGTTTTGAGCTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SNLGSTSHNSKGPLQTPGLSSIN*CFELSK
Trigger: CTTGGAGAGCTCAAAACACAAATTTATGGAGCTCAG...TCCAGGAGTCTGGAGAGGTCCTTTTGAGTTGTGAGATGTGGACCCAAGGTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGTCTTCAGAAAGCTCCTaGCTAGGATGGCCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKSSESS*LGWPGS
Trigger: TGAACCTGGCCATCCTAGCAAGGAGCTTTCTGAAGA...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTACAACAGGCTCCTCTTaGCCTGTACCGATAATAAGT +
Preference number: 5 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTTTGSS*PVPIIS
Trigger: ACTTATTATCGGTACAGGCAAAGAGGAGCCTGTTGT...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTCAACTAGACAGCAAATaGAGGTGCACAGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: LAINVAYTHCGAEHSELLQLDSK*RCTAPL
Trigger: AAGAGGAGCTGTGCACCTCAATTTGCTGTCTAGTTG...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTAAACACCACTACTGCTaGCTTCCCTACACTCATTGG +
Preference number: 5 (lower is better)
Translates to: LAINVAYTHCGAEHSELLKHHYC*LPYTHW
Trigger: CCAATGAGTGTAGGGAAGCAAGCAGTAGTGGTGTTT...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CTATTCCAAAGATCACACTCGCTTCTGGACTTCAGAATTTCCCACCCTCCTTGCTGGCATGTTTTCTGGTaGGATAGAAGCTTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: LFQRSHSLLDFRISHPPCWHVFW*DRSFPV
Trigger: CACAGGAAAGCTTCTATCCAACCAGAAAACATGCCA...GCAAGGAGGGTGGGAAATTCTGAAGTCCAGAAGCGAGTGTGATCTTTGGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TCTGTAAACATGGGCACTGGCACAGTTAGTACGAGAGCAGCAGCTTGTCTCCAGATGAATGCCACTAGATaGATGACCTTTATGATGACC +
Preference number: 5 (lower is better)
Translates to: SVNMGTGTVSTRAAACLQMNATR*MTFMMT
Trigger: GGTCATCATAAAGGTCATCAATCTAGTGGCATTCAT...CTGGAGACAAGCTGCTGCTCTCGTACTAACTGTGCCAGTGCCCATGTTTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTTCCACCTCAAAGTCCTaGGTGGGCAGACGCACGGAG +
Preference number: 5 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVSTSKS*VGRRTE
Trigger: CTCCGTGCGTCTGCCCACCAAGGACTTTGAGGTGGA...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTCCTCCTTGCGGCTTGTaGAACTGTTTTTATCATAGT +
Preference number: 5 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTPPCGL*NCFYHS
Trigger: ACTATGATAAAAACAGTTCAACAAGCCGCAAGGAGG...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GGATGGATGGATGGATGGATGGATGAGGCCACCTGTGTTCAACAAAAACACGTAAGAGCTTGCACGCTGTaGAACTATTTTTATCGTCTG +
Preference number: 5 (lower is better)
Translates to: GWMDGWMDEATCVQQKHVRACTL*NYFYRL
Trigger: CAGACGATAAAAATAGTTCAACAGCGTGCAAGCTCT...TACGTGTTTTTGTTGAACACAGGTGGCCTCATCCATCCATCCATCCATCCATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTAGTTACCTTTTCTCCTaGAGGCTAATGAAAAAGGGG +
Preference number: 5 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTSYLFS*RLMKKG
Trigger: CCCCTTTTTCATTAGCCTCAAGGAGAAAAGGTAACT...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp CTGGCTATAAATGTAGCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTGAAATTCAGTCCAACTaGGCTTTCACTGGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: LAINVAYTHCGAEHSELLEIQSN*AFTGEK
Trigger: TTTTTCCCCAGTGAAAGCCAAGTTGGACTGAATTTC...AAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGCTACATTTATAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGCTCAAGTGGATGAACTaGCTACTATCCTGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKLKWMN*LLSCCH
Trigger: ATGGCAACAGGATAGTAGCAAGTTCATCCACTTGAG...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GCCTACACACATTGTGGGGCTGAGCATTCTGAACTGCTTTTGGTGCTAAGTACTGCCAATTCCGTTTCTTaGCTTATAAATATAGCCTGC +
Preference number: 5 (lower is better)
Translates to: AYTHCGAEHSELLLVLSTANSVS*LINIAC
Trigger: GCAGGCTATATTTATAAGCAAAGAAACGGAATTGGC...AGTACTTAGCACCAAAAGCAGTTCAGAATGCTCAGCCCCACAATGTGTGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGTCCAATCAGTTTGGTTaGTGGAGACTCATATTAAGG +
Preference number: 5 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKSNQFG*WRLILR
Trigger: CCTTAATATGAGTCTCCACAAACCAAACTGATTGGA...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGATCGATTGGATTATCTaGGCCAAAGATACCACCATT +
Preference number: 5 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKIDWII*AKDTTI
Trigger: AATGGTGGTATCTTTGGCCAAGATAATCCAATCGAT...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp TTAGAAACACAGTGGTACTACCATTGTCCCTTTCACCCTCAGTCTTCTGGAAAGCCCTTGAAACTTCTATaGTTAAAAGCTTTGCACTTG +
Preference number: 5 (lower is better)
Translates to: LETQWYYHCPFHPQSSGKPLKLL*LKALHL
Trigger: CAAGTGCAAAGCTTTTAACAATAGAAGTTTCAAGGG...CTTTCCAGAAGACTGAGGGTGAAAGGGACAATGGTAGTACCACTGTGTTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTGCAGCAACCCCCAGATaGGTAAAGGGTTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVAATPR*VKGSSD
Trigger: ATCAGATGAACCCTTTACCAATCTGGGGGTTGCTGC...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTGAGGAACCCACAACTTaGTCTCCACTGACATCTGTA +
Preference number: 5 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVEEPTT*SPLTSV
Trigger: TACAGATGTCAGTGGAGACAAAGTTGTGGGTTCCTC...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTTTGATTCCAATCAGTTaGGTTTGTGGAGACTCATAT +
Preference number: 5 (lower is better)
Translates to: KKNIVGKAQAHHISWPAILIPIS*VCGDSY
Trigger: ATATGAGTCTCCACAAACCAAACTGATTGGAATCAA...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp AAAAAGAACATAGTTGGGAAAGCACAGGCCCATCACATATCATGGCCTGCAATTAAACGTACTGGAAAATaGAGAATCCTCATAAGAGCT +
Preference number: 5 (lower is better)
Translates to: KKNIVGKAQAHHISWPAIKRTGK*RILIRA
Trigger: AGCTCTTATGAGGATTCTCAATTTTCCAGTACGTTT...AATTGCAGGCCATGATATGTGATGGGCCTGTGCTTTCCCAACTATGTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS-3UTR CAA 90 bp GACTTCATTCAACTGCCACCCTCAATTAAGTATCAGTATGTTCTTGTAATAGTTCTGTCATCTGGGGTTTaGAAAACAGCACCTAGAAAC +
Preference number: 5 (lower is better)
Translates to: DFIQLPPSIKYQYVLVIVLSSGV*KTAPRN
Trigger: GTTTCTAGGTGCTGTTTTCAAAACCCCAGATGACAG...AACTATTACAAGAACATACTGATACTTAATTGAGGGTGGCAGTTGAATGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS CCA 90 bp TATGTATATATACATGCCTTTGCAGTCCACAATTTTGGCATGTTATaGAAACAAAGAGGGTTTCTCACTTCTAGTGGAGCCCCTATTAAA +
Preference number: 5 (lower is better)
Translates to: YVYIHAFAVHNFGML*KQRGFLTSSGAPIK
Trigger: TTTAATAGGGGCTCCACTAGAAGTGAGAAACCCTCTTTGTTTCCATAACATGCCAAAATTGTGGACTGCAAAGGCATGTATATATACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS CAA 90 bp CCTTCCAGCGGTGGCTTCCCCGACAACACGCGCAGGAACGTGCTCTaGCCTGCGCCATCCAGCCCCAGCACCAGCACCTCGCGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: PSSGGFPDNTRRNVL*PAPSSPSTSTSRCS
Trigger: GGAACAGCGCGAGGTGCTGGTGCTGGGGCTGGATGGCGCAGGCAAGAGCACGTTCCTGCGCGTGTTGTCGGGGAAGCCACCGCTGGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS GCA 72 bp CCAGCGGTGGCTTCCCCGACAACACGCGCAGGAACGTaGTCTTGCCTGCGCCATCCAGCCCCAGCACCAGCA +
Preference number: 6 (lower is better)
Translates to: PAVASPTTRAGT*SCLRHPAPAPA
Trigger: TGCTGGTGCTGGGGCTGGATGGCGCAGGCAAGAGCACGTTCCTGCGCGTGTTGTCGGGGAAGCCACCGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS CAA 72 bp GGTGGCTTCCCCGACAACACGCGCAGGAACGTGCTCTaGCCTGCGCCATCCAGCCCCAGCACCAGCACCTCG +
Preference number: 6 (lower is better)
Translates to: GGFPDNTRRNVL*PAPSSPSTSTS
Trigger: CGAGGTGCTGGTGCTGGGGCTGGATGGCGCAGGCAAGAGCACGTTCCTGCGCGTGTTGTCGGGGAAGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS GCA 72 bp CTCCAGGCCATGGGCCCAGGCAGCGCTCCTTGCCCCTaGCCAAGCATCTCTGAGTGGATGTCACCTGGACCG +
Preference number: 6 (lower is better)
Translates to: LQAMGPGSAPCP*PSISEWMSPGP
Trigger: CGGTCCAGGTGACATCCACTCAGAGATGCTTGGGCAGGGGCAAGGAGCGCTGCCTGGGCCCATGGCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS CAA 72 bp CCTGGACCGAGCTGCCCTCTCACAGCCCTCACCTGCTaGTTGGCCACCACGACGACAGGCAGGTCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: PGPSCPLTALTC*LATTTTGRSGS
Trigger: GGACCCTGACCTGCCTGTCGTCGTGGTGGCCAACAAGCAGGTGAGGGCTGTGAGAGGGCAGCTCGGTCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS GCA 72 bp TCACCTGGACCGAGCTGCCCTCTCACAGCCCTCACCTaGTTGTTGGCCACCACGACGACAGGCAGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: SPGPSCPLTALT*LLATTTTGRSG
Trigger: CCCTGACCTGCCTGTCGTCGTGGTGGCCAACAAGCAGGTGAGGGCTGTGAGAGGGCAGCTCGGTCCAGGTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS CCA 72 bp GGCAGCGCTCCTTGCCCCTGCCCAAGCATCTCTGAGTaGATGTCACCTGGACCGAGCTGCCCTCTCACAGCC +
Preference number: 6 (lower is better)
Translates to: GSAPCPCPSISE*MSPGPSCPLTA
Trigger: GGCTGTGAGAGGGCAGCTCGGTCCAGGTGACATCCACTCAGAGATGCTTGGGCAGGGGCAAGGAGCGCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS CAA 72 bp GGACCGAGCTGCCCTCTCACAGCCCTCACCTGCTTGTaGGCCACCACGACGACAGGCAGGTCAGGGTCCTTG +
Preference number: 6 (lower is better)
Translates to: GPSCPLTALTCL*ATTTTGRSGSL
Trigger: CAAGGACCCTGACCTGCCTGTCGTCGTGGTGGCCAACAAGCAGGTGAGGGCTGTGAGAGGGCAGCTCGGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS TCA 72 bp CCACCTCAAAGTCCTTGGTGGGCAGACGCACGGAGTTaGAGCCCCAGGTGGGGATGTGGCCTTCCAGCGGTG +
Preference number: 6 (lower is better)
Translates to: PPQSPWWADARS*SPRWGCGLPAV
Trigger: CACCGCTGGAAGGCCACATCCCCACCTGGGGCTTCAACTCCGTGCGTCTGCCCACCAAGGACTTTGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS CCA 72 bp GACCGAGCTGCCCTCTCACAGCCCTCACCTGCTTGTTaGCCACCACGACGACAGGCAGGTCAGGGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: DRAALSQPSPAC*PPRRQAGQGPC
Trigger: ACAAGGACCCTGACCTGCCTGTCGTCGTGGTGGCCAACAAGCAGGTGAGGGCTGTGAGAGGGCAGCTCGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS CAA 90 bp ATGTCACCTGGACCGAGCTGCCCTCTCACAGCCCTCACCTGCTTGTaGGCCACCACGACGACAGGCAGGTCAGGGTCCTTGTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: MSPGPSCPLTALTCL*ATTTTGRSGSLSSS
Trigger: GCTGCTGGACAAGGACCCTGACCTGCCTGTCGTCGTGGTGGCCAACAAGCAGGTGAGGGCTGTGAGAGGGCAGCTCGGTCCAGGTGACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS CAA 90 bp TGGATGTCACCTGGACCGAGCTGCCCTCTCACAGCCCTCACCTGCTaGTTGGCCACCACGACGACAGGCAGGTCAGGGTCCTTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: WMSPGPSCPLTALTC*LATTTTGRSGSLSS
Trigger: GCTGGACAAGGACCCTGACCTGCCTGTCGTCGTGGTGGCCAACAAGCAGGTGAGGGCTGTGAGAGGGCAGCTCGGTCCAGGTGACATCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS CAA 90 bp TCGGCCGGGACGGTCCGCGAGATGACGGATCCGCGATGTCTCTCTTaGCCGGTAGCTCCCACATCCGACATGCCTGGGACCACGCTAAAT +
Preference number: 6 (lower is better)
Translates to: SAGTVREMTDPRCLS*PVAPTSDMPGTTLN
Trigger: ATTTAGCGTGGTCCCAGGCATGTCGGATGTGGGAGCTACCGGCAAAGAGAGACATCGCGGATCCGTCATCTCGCGGACCGTCCCGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS GCA 72 bp CGCTGGTTATCGATAGCCTGTAGACCCAGCTCCCGCTaGAGCTCCCCCATACTCATGGCCTCGCTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: RWLSIACRPSSR*SSPILMASLRS
Trigger: GGACCTGAGCGAGGCCATGAGTATGGGGGAGCTGCAGCGGGAGCTGGGTCTACAGGCTATCGATAACCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS CAA 72 bp ACGGTCCGCGAGATGACGGATCCGCGATGTCTCTCTTaGCCGGTAGCTCCCACATCCGACATGCCTGGGACC +
Preference number: 6 (lower is better)
Translates to: TVREMTDPRCLS*PVAPTSDMPGT
Trigger: GGTCCCAGGCATGTCGGATGTGGGAGCTACCGGCAAAGAGAGACATCGCGGATCCGTCATCTCGCGGACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS GCA 72 bp CCAAGCATCTCTGAGTGGATGTCACCTGGACCGAGCTaGCCTCTCACAGCCCTCACCTGCTTGTTGGCCACC +
Preference number: 6 (lower is better)
Translates to: PSISEWMSPGPS*PLTALTCLLAT
Trigger: GGTGGCCAACAAGCAGGTGAGGGCTGTGAGAGGGCAGCTCGGTCCAGGTGACATCCACTCAGAGATGCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507151.1
CDS CCA 72 bp GGGGCAATGCTGGCTGCCAAGAGGAAAACCTCCCGCTaGTTATCGATAGCCTGTAGACCCAGCTCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: GAMLAAKRKTSR*LSIACRPSSRC
Trigger: GCAGCGGGAGCTGGGTCTACAGGCTATCGATAACCAGCGGGAGGTTTTCCTCTTGGCAGCCAGCATTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS GCA 72 bp GATGTGCACGGTGCCAGGCTCTTCAAAGGTGGGTCCTaGAGGGGCAATGCTGGCTGCCAAGAGGAAAACCTC +
Preference number: 6 (lower is better)
Translates to: DVHGARLFKGGS*RGNAGCQEENL
Trigger: GAGGTTTTCCTCTTGGCAGCCAGCATTGCCCCTGCAGGACCCACCTTTGAAGAGCCTGGCACCGTGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS CAA 72 bp CTGCCCCCAATTTCTAGCAGGTCCACCTCAAAGTCCTaGGTGGGCAGACGCACGGAGTTGAAGCCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: LPPISSRSTSKS*VGRRTELKPQV
Trigger: CACCTGGGGCTTCAACTCCGTGCGTCTGCCCACCAAGGACTTTGAGGTGGACCTGCTAGAAATTGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS TCA 72 bp GGCAGAAGTTTGGTTACAGTGTCAACCGAAAGCGTCTaGACCGGAATGCTCGACGGAAGGCAGCGCCGCGGA +
Preference number: 6 (lower is better)
Translates to: GRSLVTVSTESV*TGMLDGRQRRG
Trigger: TCCGCGGCGCTGCCTTCCGTCGAGCATTCCGGTTCAGACGCTTTCGGTTGACACTGTAACCAAACTTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS GCA 72 bp TGCCAGGCTCTTCAAAGGTGGGTCCTGCAGGGGCAATaGTGGCTGCCAAGAGGAAAACCTCCCGCTGGTTAT +
Preference number: 6 (lower is better)
Translates to: CQALQRWVLQGQ*WLPRGKPPAGY
Trigger: ATAACCAGCGGGAGGTTTTCCTCTTGGCAGCCAGCATTGCCCCTGCAGGACCCACCTTTGAAGAGCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310389.6
CDS GCA 72 bp TGGTTACAGTGTCAACCGAAAGCGTCTGAACCGGAATaGTCGACGGAAGGCAGCGCCGCGGATCGAATGGTG +
Preference number: 6 (lower is better)
Translates to: WLQCQPKASEPE*STEGSAADRMV
Trigger: CACCATTCGATCCGCGGCGCTGCCTTCCGTCGAGCATTCCGGTTCAGACGCTTTCGGTTGACACTGTAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS CCA 72 bp TCTCTCTTTGCCGGTAGCTCCCACATCCGACATGCCTaGGACCACGCTAAATCGGTACGGCAGAACCTGCTT +
Preference number: 6 (lower is better)
Translates to: SLFAGSSHIRHA*DHAKSVRQNLL
Trigger: AAGCAGGTTCTGCCGTACCGATTTAGCGTGGTCCCAGGCATGTCGGATGTGGGAGCTACCGGCAAAGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS CCA 72 bp GCCCAAGGCCAAGGGCAAAACCCGGAGGCAGAAGTTTaGTTACAGTGTCAACCGAAAGCGTCTGAACCGGAA +
Preference number: 6 (lower is better)
Translates to: AQGQGQNPEAEV*LQCQPKASEPE
Trigger: TTCCGGTTCAGACGCTTTCGGTTGACACTGTAACCAAACTTCTGCCTCCGGGTTTTGCCCTTGGCCTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503175.1
CDS TCA 72 bp TCTGGCAATGAAGCAGCAGCAGTACAACTATGGTCTTaGCAGGCAGGTGGCAAGCAGGAGAGCTCCAGCCTA +
Preference number: 6 (lower is better)
Translates to: SGNEAAAVQLWS*QAGGKQESSSL
Trigger: TAGGCTGGAGCTCTCCTGCTTGCCACCTGCCTGTCAAGACCATAGTTGTACTGCTGCTGCTTCATTGCCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310389.6