Pregenerated sensors for ARL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000120805Ensembl transcript IDs: ENST00000261636.13, ENST00000536227.5, ENST00000539055.5, ENST00000548070.1, ENST00000549283.1, ENST00000549302.1, ENST00000550597.1, ENST00000551092.5, ENST00000551671.5, ENST00000551688.1, ENST00000551828.5
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGGGATCAGGCTTAACCAAGTGCTGAACTTTGGGGCAACTTCATaGCCTAGGATTCAAGATGGCCAGCGGCTACATGCCGGGTCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: RGIRLNQVLNFGATS*PRIQDGQRLHAGSA Trigger: GGCAGACCCGGCATGTAGCCGCTGGCCATCTTGAATCCTAGGGCATGAAGTTGCCCCAAAGTTCAGCACTTGGTTAAGCCTGATCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR TCA 90 bp | CCTATTCTTTGTGATAAACCAGAGGGATCAGGCTTAACCAAGTGCTaGACTTTGGGGCAACTTCATGCCCTAGGATTCAAGATGGCCAGC | + |
|
Preference number: 1 (lower is better) Translates to: PILCDKPEGSGLTKC*TLGQLHALGFKMAS Trigger: GCTGGCCATCTTGAATCCTAGGGCATGAAGTTGCCCCAAAGTTCAGCACTTGGTTAAGCCTGATCCCTCTGGTTTATCACAAAGAATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR TCA 90 bp | AAAAGTTTTACTTTGAGCCCTATTCCTACCTTACAAGCTAGCAGGTaGCCTTGGGCAAGCCAACCTATTAGAACCCTGGGTTCACGTCCA | + |
|
Preference number: 1 (lower is better) Translates to: KSFTLSPIPTLQASR*PWASQPIRTLGSRP Trigger: TGGACGTGAACCCAGGGTTCTAATAGGTTGGCTTGCCCAAGGTCACCTGCTAGCTTGTAAGGTAGGAATAGGGCTCAAAGTAAAACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR TCA 90 bp | CAGATGCACCTGAAGACCAGTGAGAGAAAACGCTTGAGGAACTTATaGAATAAGCTGCTAAGTAAATCAAAGTTTCATCCTCAACACGGG | + |
|
Preference number: 1 (lower is better) Translates to: QMHLKTSERKRLRNL*NKLLSKSKFHPQHG Trigger: CCCGTGTTGAGGATGAAACTTTGATTTACTTAGCAGCTTATTTCATAAGTTCCTCAAGCGTTTTCTCTCACTGGTCTTCAGGTGCATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551671.5 |
||
| 3UTR GCA 90 bp | AGATACGGTCCCTGCCCTCAGAGCTTACATTTCAACAGTTTAAAGTaGATCTCAGGTATTTCAGATAACAGAAGTAATTCTACCACTCTC | + |
|
Preference number: 1 (lower is better) Translates to: RYGPCPQSLHFNSLK*ISGISDNRSNSTTL Trigger: GAGAGTGGTAGAATTACTTCTGTTATCTGAAATACCTGAGATGCACTTTAAACTGTTGAAATGTAAGCTCTGAGGGCAGGGACCGTATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR GCA 90 bp | GACAAATATCTATCCTACTGTTTCAACTATGAACATATTCTGAAATaGCATATGCCAGGCGCCATACCAGATACTAGGGACATAAATATG | + |
|
Preference number: 1 (lower is better) Translates to: DKYLSYCFNYEHILK*HMPGAIPDTRDINM Trigger: CATATTTATGTCCCTAGTATCTGGTATGGCGCCTGGCATATGGCATTTCAGAATATGTTCATAGTTGAAACAGTAGGATAGATATTTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR GCA 90 bp | ATTTGCCATGTATATATCAATATCCAAACGCTGGTAGTATACCTGTaGAGTTGTCTCCTGCTAGACAAGGACCATATAATTTATAGCTTA | + |
|
Preference number: 1 (lower is better) Translates to: ICHVYINIQTLVVYL*SCLLLDKDHIIYSL Trigger: TAAGCTATAAATTATATGGTCCTTGTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATATACATGGCAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR TCA 90 bp | TTTTTAGCAATTATGACGCACTATATTTACTTCTGTCACATTAGCTaGTTCTGTGGTGGACTGGGTAATTTGAAAAGCTCCTTTGAACAT | + |
|
Preference number: 1 (lower is better) Translates to: FLAIMTHYIYFCHIS*FCGGLGNLKSSFEH Trigger: ATGTTCAAAGGAGCTTTTCAAATTACCCAGTCCACCACAGAATCAGCTAATGTGACAGAAGTAAATATAGTGCGTCATAATTGCTAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR GCA 90 bp | AACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACAAGGACCATATAATTGGCCAGCGGCTACATaGCGGGTCTGCCTGCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NAGSIPVQLSPARQGPYNWPAAT*RVCLPG Trigger: TCCTGGCAGGCAGACCCGGCATGTAGCCGCTGGCCA...ATTATATGGTCCTTGTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR GCA 90 bp | TATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACGCTACATGCCGGGTCTaGCTGCCAGGACCTTACTTC | + |
|
Preference number: 2 (lower is better) Translates to: YINIQTLVVYLCSCLLLDATCRV*LPGPYF Trigger: GAAGTAAGGTCCTGGCAGGCAGACCCGGCATGTAGC...GTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR GCA 90 bp | ATATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACATGCCGGGTCTGCCTaGCAGGACCTTACTTCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: IYQYPNAGSIPVQLSPARHAGSA*QDLTSH Trigger: ATGGGAAGTAAGGTCCTGGCAGGCAGACCCGGCATG...TCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCAGTGTGAAGTACACTTaGCTGTTTCCAAAGGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SQPIRTLGSRPYSEDIITSVKYT*LFPKGE Trigger: CTCTCCCTTTGGAAACAGTCAAGTGTACTTCACACT...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| 3UTR-3UTR TCA 90 bp | AACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACAAGGACCATATAATTTCTGTCACATTAGCTaGTTCTGTGGTGGACTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: NAGSIPVQLSPARQGPYNFCHIS*FCGGLG Trigger: ACCCAGTCCACCACAGAATCAGCTAATGTGACAGAA...ATTATATGGTCCTTGTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR TCA 90 bp | ATATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACCAGCCATGTGCCATTaGCCAGGAGTGAACTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: IYQYPNAGSIPVQLSPARPAMCH*PGVNSS Trigger: ACTTGAGTTCACTCCTGGTCAATGGCACATGGCTGG...TCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR GCA 90 bp | AACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACAAGGACCATATAATAGTGAACTTGCTTTCTaGATTTTCCAGCCATGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: NAGSIPVQLSPARQGPYNSELAF*IFQPCA Trigger: GGCACATGGCTGGAAAATGCAGAAAGCAAGTTCACT...ATTATATGGTCCTTGTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR CCA 90 bp | TTGCAAAGGGCTACTTGTCAAGATGACAAATATCTATCCTACTGTTTCAACTATGCCAGAGGCCAACACTaGAAGGACAGTGAGGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LQRATCQDDKYLSYCFNYARGQH*KDSEGQ Trigger: TTGGCCCTCACTGTCCTTCCAGTGTTGGCCTCTGGC...ATAGTTGAAACAGTAGGATAGATATTTGTCATCTTGACAAGTAGCCCTTTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR TCA 90 bp | TATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACGCCTCAGGCTGTAAGTaGACTTGCTTTCTGCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: YINIQTLVVYLCSCLLLDASGCK*TCFLHF Trigger: AAAATGCAGAAAGCAAGTTCACTTACAGCCTGAGGC...GTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR GCA 90 bp | TTAAGGTTTTTGTACGTCACCGTCTCTACATTAAATCCAATGGCATTTAAGACGGCTCCCCCACACATGTaGAGGTGTGTGCACAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: LRFLYVTVSTLNPMAFKTAPPHM*RCVHKT Trigger: TGTTTTGTGCACACACCTGCACATGTGTGGGGGAGC...CGTCTTAAATGCCATTGGATTTAATGTAGAGACGGTGACGTACAAAAACCTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| 3UTR CAA 90 bp | CCAGGCGCCATACCAGATACTAGGGACATAAATATGAAAAAGTCTTaGCCCCTCAGGAGTAATATTGGTTGTACTGGAACATTTGTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PGAIPDTRDINMKKS*PLRSNIGCTGTFVA Trigger: AGCTACAAATGTTCCAGTACAACCAATATTACTCCTGAGGGGCAAAGACTTTTTCATATTTATGTCCCTAGTATCTGGTATGGCGCCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCCATAGAACATTCAGGTaGTTCGATCAAATTATCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SQPIRTLGSRPYSEDIITHRTFR*FDQIIP Trigger: AGGGATAATTTGATCGAATCACCTGAATGTTCTATG...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| 3UTR-3UTR TCA 90 bp | TTGCAAAGGGCTACTTGTCAAGATGACAAATATCTATCCTACTGTTTCAACTATTTACAAGCTAGCAGGTaGCCTTGGGCAAGCCAACCT | + |
|
Preference number: 2 (lower is better) Translates to: LQRATCQDDKYLSYCFNYLQASR*PWASQP Trigger: AGGTTGGCTTGCCCAAGGTCACCTGCTAGCTTGTAA...ATAGTTGAAACAGTAGGATAGATATTTGTCATCTTGACAAGTAGCCCTTTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR TCA 90 bp | ATATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGAACTATGAACATATTCTaGAATGCCATATGCCAGGCG | + |
|
Preference number: 2 (lower is better) Translates to: IYQYPNAGSIPVQLSPARTMNIF*NAICQA Trigger: CGCCTGGCATATGGCATTTCAGAATATGTTCATAGT...TCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR TCA 90 bp | CCATGTATATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTCCAAAAGTTTTACTTTaGGCCCTATTCCTACCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: PCIYQYPNAGSIPVQLSPPKVLL*ALFLPY Trigger: GTAAGGTAGGAATAGGGCTCAAAGTAAAACTTTTGG...AGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATATACATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR CAA 90 bp | GGTGTTTTACCCATTGCCAGGCCTCTCATAAAACAATATTCAGATTaGCCATGTATATATCAATATCCAAACGCTGGTAGTATACCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GVLPIARPLIKQYSD*PCIYQYPNAGSIPV Trigger: CACAGGTATACTACCAGCGTTTGGATATTGATATATACATGGCAAATCTGAATATTGTTTTATGAGAGGCCTGGCAATGGGTAAAACACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR TCA 90 bp | TTGCAAAGGGCTACTTGTCAAGATGACAAATATCTATCCTACTGTTTCAACTATAGTGTGAAGTACACTTaGCTGTTTCCAAAGGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LQRATCQDDKYLSYCFNYSVKYT*LFPKGE Trigger: CTCTCCCTTTGGAAACAGTCAAGTGTACTTCACACT...ATAGTTGAAACAGTAGGATAGATATTTGTCATCTTGACAAGTAGCCCTTTGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR GCA 90 bp | TATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACAACTCAAGTATAAATTaGAAAGGGCTACTTGTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: YINIQTLVVYLCSCLLLDNSSIN*KGLLVK Trigger: CTTGACAAGTAGCCCTTTGCAATTTATACTTGAGTT...GTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR TCA 90 bp | TTGCAAAGGGCTACTTGTCAAGATGACAAATATCTATCCTACTGTTTCAACTATGTGGACTGGGTAATTTaGAAAGCTCCTTTGAACATG | + |
|
Preference number: 2 (lower is better) Translates to: LQRATCQDDKYLSYCFNYVDWVI*KAPLNM Trigger: CATGTTCAAAGGAGCTTTTCAAATTACCCAGTCCAC...ATAGTTGAAACAGTAGGATAGATATTTGTCATCTTGACAAGTAGCCCTTTGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR TCA 90 bp | TTGCAAAGGGCTACTTGTCAAGATGACAAATATCTATCCTACTGTTTCAACTATCATAGAACATTCAGGTaGTTCGATCAAATTATCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LQRATCQDDKYLSYCFNYHRTFR*FDQIIP Trigger: AGGGATAATTTGATCGAATCACCTGAATGTTCTATG...ATAGTTGAAACAGTAGGATAGATATTTGTCATCTTGACAAGTAGCCCTTTGCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR GCA 72 bp | AGGCTTAACCAAGTGCTGAACTTTGGGGCAACTTCATaGCCTAGGATTCAAGATGGCCAGCGGCTACATGCC | + |
|
Preference number: 3 (lower is better) Translates to: RLNQVLNFGATS*PRIQDGQRLHA Trigger: GGCATGTAGCCGCTGGCCATCTTGAATCCTAGGGCATGAAGTTGCCCCAAAGTTCAGCACTTGGTTAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR CAA 90 bp | CAACTTCATGCCCTAGGATTCAAGATGGCCAGCGGCTACATGCCGGGTCTGCCTGGTGGACTGGGTAATTaGAAAAGCTCCTTTGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: QLHALGFKMASGYMPGLPGGLGN*KSSFEH Trigger: ATGTTCAAAGGAGCTTTTCAAATTACCCAGTCCACC...AGGCAGACCCGGCATGTAGCCGCTGGCCATCTTGAATCCTAGGGCATGAAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR TCA 72 bp | ACTTTGAGCCCTATTCCTACCTTACAAGCTAGCAGGTaGCCTTGGGCAAGCCAACCTATTAGAACCCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TLSPIPTLQASR*PWASQPIRTLG Trigger: ACCCAGGGTTCTAATAGGTTGGCTTGCCCAAGGTCACCTGCTAGCTTGTAAGGTAGGAATAGGGCTCAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR TCA 72 bp | TGTGATAAACCAGAGGGATCAGGCTTAACCAAGTGCTaGACTTTGGGGCAACTTCATGCCCTAGGATTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CDKPEGSGLTKC*TLGQLHALGFK Trigger: CTTGAATCCTAGGGCATGAAGTTGCCCCAAAGTTCAGCACTTGGTTAAGCCTGATCCCTCTGGTTTATCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR CAA 90 bp | ATATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGATCCAGCCATGTGCCATaGACCAGGAGTGAACTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: IYQYPNAGSIPVQLSPARSSHVP*TRSELK Trigger: CTTGAGTTCACTCCTGGTCAATGGCACATGGCTGGA...TCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR TCA 72 bp | TTTATGAGTCAAGCTTCTGAACCAAAAGTTTTACTTTaGGCCCTATTCCTACCTTACAAGCTAGCAGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: FMSQASEPKVLL*ALFLPYKLAGD Trigger: GTCACCTGCTAGCTTGTAAGGTAGGAATAGGGCTCAAAGTAAAACTTTTGGTTCAGAAGCTTGACTCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR-3UTR CAA 90 bp | CCATGTATATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTACCAAAAGTTTTACTTaGAGCCCTATTCCTACCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PCIYQYPNAGSIPVQLSPTKSFT*SPIPTL Trigger: TAAGGTAGGAATAGGGCTCAAAGTAAAACTTTTGGT...AGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATATACATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR GCA 72 bp | GTATATATCAATATCCAAACGCTGGTAGTATACCTGTaGAGTTGTCTCCTGCTAGACAAGGACCATATAATT | + |
|
Preference number: 3 (lower is better) Translates to: VYINIQTLVVYL*SCLLLDKDHII Trigger: AATTATATGGTCCTTGTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR GCA 72 bp | CCCTGCCCTCAGAGCTTACATTTCAACAGTTTAAAGTaGATCTCAGGTATTTCAGATAACAGAAGTAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: PCPQSLHFNSLK*ISGISDNRSNS Trigger: AGAATTACTTCTGTTATCTGAAATACCTGAGATGCACTTTAAACTGTTGAAATGTAAGCTCTGAGGGCAGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR TCA 72 bp | TTGGGAATATATAGTATAGTTTATGAGTCAAGCTTCTaGACCAAAAGTTTTACTTTGAGCCCTATTCCTACC | + |
|
Preference number: 3 (lower is better) Translates to: LGIYSIVYESSF*TKSFTLSPIPT Trigger: GGTAGGAATAGGGCTCAAAGTAAAACTTTTGGTTCAGAAGCTTGACTCATAAACTATACTATATATTCCCAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR GCA 90 bp | CAACTTCATGCCCTAGGATTCAAGATGGCCAGCGGCTACATGCCGGGTCTGCCTGCAGTTTTCCTGGACTaGCGGGAGGCAGCTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: QLHALGFKMASGYMPGLPAVFLD*REAAVQ Trigger: TTGTACAGCTGCCTCCCGGCAGTCCAGGAAAACTGC...AGGCAGACCCGGCATGTAGCCGCTGGCCATCTTGAATCCTAGGGCATGAAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR GCA 90 bp | CAATGGCATTTAAGACGAAATAGTATGCTCTGCTCCCCCACACATGTGCAGGTGTCCTTGGCCTTCGGCTaGAGCTCCGAGGCGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QWHLRRNSMLCSPTHVQVSLAFG*SSEAVS Trigger: GGAAACCGCCTCGGAGCTGCAGCCGAAGGCCAAGGA...CACCTGCACATGTGTGGGGGAGCAGAGCATACTATTTCGTCTTAAATGCCATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS-3UTR GCA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCTCCTTGGCCTTCGGCTaGAGCTCCGAGGCGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQPIRTLGSRPYSEDIITSLAFG*SSEAVS Trigger: GGAAACCGCCTCGGAGCTGCAGCCGAAGGCCAAGGA...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| CDS-3UTR GCA 90 bp | GCCCTATTCCTACCTTACAAGCTAGCAGGTGACCTTGGGCAAGCCAACCTATTAGCTACATGCCGGGTCTaGCTGCCAGGACCTTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALFLPYKLAGDLGQANLLATCRV*LPGPYF Trigger: GAAGTAAGGTCCTGGCAGGCAGACCCGGCATGTAGC...TAATAGGTTGGCTTGCCCAAGGTCACCTGCTAGCTTGTAAGGTAGGAATAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CCA 90 bp | CAACTTCATGCCCTAGGATTCAAGATGGCCAGCGGCTACATGCCGGGTCTGCCTAGTAGGAATGGGTGCTaGAGAATGAGCAAGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLHALGFKMASGYMPGLPSRNGC*RMSKKG Trigger: ACCCTTCTTGCTCATTCTCCAGCACCCATTCCTACT...AGGCAGACCCGGCATGTAGCCGCTGGCCATCTTGAATCCTAGGGCATGAAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR GCA 90 bp | CAACTTCATGCCCTAGGATTCAAGATGGCCAGCGGCTACATGCCGGGTCTGCCTAGTGAACTTGCTTTCTaGATTTTCCAGCCATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLHALGFKMASGYMPGLPSELAF*IFQPCA Trigger: GGCACATGGCTGGAAAATGCAGAAAGCAAGTTCACT...AGGCAGACCCGGCATGTAGCCGCTGGCCATCTTGAATCCTAGGGCATGAAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR TCA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCCTCGCCGATCTTCAGTaGTTCCTTGGCCTTCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQPIRTLGSRPYSEDIITLADLQ*FLGLRL Trigger: CAGCCGAAGGCCAAGGAATCACTGAAGATCGGCGAG...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| CDS-3UTR TCA 90 bp | GCCCTATTCCTACCTTACAAGCTAGCAGGTGACCTTGGGCAAGCCAACCTATTATTACAAGCTAGCAGGTaGCCTTGGGCAAGCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: ALFLPYKLAGDLGQANLLLQASR*PWASQP Trigger: AGGTTGGCTTGCCCAAGGTCACCTGCTAGCTTGTAA...TAATAGGTTGGCTTGCCCAAGGTCACCTGCTAGCTTGTAAGGTAGGAATAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR TCA 90 bp | GCCCTATTCCTACCTTACAAGCTAGCAGGTGACCTTGGGCAAGCCAACCTATTACCAGCCATGTGCCATTaGCCAGGAGTGAACTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALFLPYKLAGDLGQANLLPAMCH*PGVNSS Trigger: ACTTGAGTTCACTCCTGGTCAATGGCACATGGCTGG...TAATAGGTTGGCTTGCCCAAGGTCACCTGCTAGCTTGTAAGGTAGGAATAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR GCA 90 bp | CAACTTCATGCCCTAGGATTCAAGATGGCCAGCGGCTACATGCCGGGTCTGCCTACAGGAGTGGCCATTTaGACCTATGTTCTGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLHALGFKMASGYMPGLPTGVAI*TYVLIS Trigger: TGAAATCAGAACATAGGTGCAAATGGCCACTCCTGT...AGGCAGACCCGGCATGTAGCCGCTGGCCATCTTGAATCCTAGGGCATGAAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR GCA 90 bp | GCCCTATTCCTACCTTACAAGCTAGCAGGTGACCTTGGGCAAGCCAACCTATTACTACTGTGTGCCAGGTaGACCACACTAGATGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: ALFLPYKLAGDLGQANLLLLCAR*TTLDAT Trigger: CGTTGCATCTAGTGTGGTGCACCTGGCACACAGTAG...TAATAGGTTGGCTTGCCCAAGGTCACCTGCTAGCTTGTAAGGTAGGAATAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CCA 90 bp | CAATGGCATTTAAGACGAAATAGTATGCTCTGCTCCCCCACACATGTGCAGGTGTCTTCAGTGATTCCTTaGCCTTCGGCTGCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QWHLRRNSMLCSPTHVQVSSVIP*PSAAAP Trigger: CGGAGCTGCAGCCGAAGGCCAAGGAATCACTGAAGA...CACCTGCACATGTGTGGGGGAGCAGAGCATACTATTTCGTCTTAAATGCCATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS-3UTR GCA 90 bp | CCATGTATATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTTCCTTGGCCTTCGGCTaGAGCTCCGAGGCGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCIYQYPNAGSIPVQLSPSLAFG*SSEAVS Trigger: GGAAACCGCCTCGGAGCTGCAGCCGAAGGCCAAGGA...AGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATATACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR GCA 90 bp | CAATGGCATTTAAGACGAAATAGTATGCTCTGCTCCCCCACACATGTGCAGGTGGCTCCCCCACACATGTaGAGGTGTGTGCACAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: QWHLRRNSMLCSPTHVQVAPPHM*RCVHKT Trigger: TGTTTTGTGCACACACCTGCACATGTGTGGGGGAGC...CACCTGCACATGTGTGGGGGAGCAGAGCATACTATTTCGTCTTAAATGCCATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS-3UTR CCA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCTCTTCAGTGATTCCTTaGCCTTCGGCTGCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQPIRTLGSRPYSEDIITSSVIP*PSAAAP Trigger: CGGAGCTGCAGCCGAAGGCCAAGGAATCACTGAAGA...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| CDS-3UTR GCA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCCCTCATCAAGGCCGGTaGCTTTGGTTGCTGACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQPIRTLGSRPYSEDIITPHQGR*LWLLTF Trigger: AAACGTCAGCAACCAAAGGCACCGGCCTTGATGAGG...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| CDS-3UTR GCA 90 bp | CAATGGCATTTAAGACGAAATAGTATGCTCTGCTCCCCCACACATGTGCAGGTGCGAAATAGTATGCTCTaGTCCCCCACACATGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QWHLRRNSMLCSPTHVQVRNSML*SPTHVQ Trigger: CTGCACATGTGTGGGGGAGCAGAGCATACTATTTCG...CACCTGCACATGTGTGGGGGAGCAGAGCATACTATTTCGTCTTAAATGCCATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS-3UTR GCA 90 bp | TTGCAAAGGGCTACTTGTCAAGATGACAAATATCTATCCTACTGTTTCAACTATTGGCCAGCGGCTACATaGCGGGTCTGCCTGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQRATCQDDKYLSYCFNYWPAAT*RVCLPG Trigger: TCCTGGCAGGCAGACCCGGCATGTAGCCGCTGGCCA...ATAGTTGAAACAGTAGGATAGATATTTGTCATCTTGACAAGTAGCCCTTTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CCA 90 bp | TATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACTCTTCAGTGATTCCTTaGCCTTCGGCTGCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YINIQTLVVYLCSCLLLDSSVIP*PSAAAP Trigger: CGGAGCTGCAGCCGAAGGCCAAGGAATCACTGAAGA...GTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CCA 90 bp | GCCCTATTCCTACCTTACAAGCTAGCAGGTGACCTTGGGCAAGCCAACCTATTAGTAACATCTCCAGTATaGCCTGATACTTGTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALFLPYKLAGDLGQANLLVTSPV*PDTCLS Trigger: GGACAGACAAGTATCAGGCCATACTGGAGATGTTAC...TAATAGGTTGGCTTGCCCAAGGTCACCTGCTAGCTTGTAAGGTAGGAATAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CCA 90 bp | CCATGTATATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCCAGAGGCCAACACTaGAAGGACAGTGAGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PCIYQYPNAGSIPVQLSPARGQH*KDSEGQ Trigger: TTGGCCCTCACTGTCCTTCCAGTGTTGGCCTCTGGC...AGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATATACATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CCA 90 bp | AACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACAAGGACCATATAATTTTTTGCAGTTTTCCTaGACTGCCGGGAGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NAGSIPVQLSPARQGPYNFLQFS*TAGRQL Trigger: CAGCTGCCTCCCGGCAGTCCAGGAAAACTGCAAAAA...ATTATATGGTCCTTGTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CCA 90 bp | CAATGGCATTTAAGACGAAATAGTATGCTCTGCTCCCCCACACATGTGCAGGTGGTAACATCTCCAGTATaGCCTGATACTTGTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QWHLRRNSMLCSPTHVQVVTSPV*PDTCLS Trigger: GGACAGACAAGTATCAGGCCATACTGGAGATGTTAC...CACCTGCACATGTGTGGGGGAGCAGAGCATACTATTTCGTCTTAAATGCCATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS-3UTR TCA 90 bp | TTAAGGTTTTTGTACGTCACCGTCTCTACATTAAATCCAATGGCATTTAAGACGCTCGCCGATCTTCAGTaGTTCCTTGGCCTTCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRFLYVTVSTLNPMAFKTLADLQ*FLGLRL Trigger: CAGCCGAAGGCCAAGGAATCACTGAAGATCGGCGAG...CGTCTTAAATGCCATTGGATTTAATGTAGAGACGGTGACGTACAAAAACCTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS-3UTR GCA 90 bp | AACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACAAGGACCATATAATTTTGGGGCAACTTCATaGCCTAGGATTCAAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: NAGSIPVQLSPARQGPYNFGATS*PRIQDG Trigger: GCCATCTTGAATCCTAGGGCATGAAGTTGCCCCAAA...ATTATATGGTCCTTGTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CCA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCGTAACATCTCCAGTATaGCCTGATACTTGTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQPIRTLGSRPYSEDIITVTSPV*PDTCLS Trigger: GGACAGACAAGTATCAGGCCATACTGGAGATGTTAC...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| CDS-3UTR CCA 90 bp | CAATGGCATTTAAGACGAAATAGTATGCTCTGCTCCCCCACACATGTGCAGGTGCTTCTTCCTCCAACATaGCAACTAACTCTGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QWHLRRNSMLCSPTHVQVLLPPT*QLTLIW Trigger: CCAAATCAGAGTTAGTTGCCATGTTGGAGGAAGAAG...CACCTGCACATGTGTGGGGGAGCAGAGCATACTATTTCGTCTTAAATGCCATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS-3UTR TCA 90 bp | AACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACAAGGACCATATAATGCCTCAGGCTGTAAGTaGACTTGCTTTCTGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NAGSIPVQLSPARQGPYNASGCK*TCFLHF Trigger: AAAATGCAGAAAGCAAGTTCACTTACAGCCTGAGGC...ATTATATGGTCCTTGTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR TCA 90 bp | TATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACGGCTTAACCAAGTGCTaGACTTTGGGGCAACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YINIQTLVVYLCSCLLLDGLTKC*TLGQLH Trigger: ATGAAGTTGCCCCAAAGTTCAGCACTTGGTTAAGCC...GTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR GCA 90 bp | TTGCAAAGGGCTACTTGTCAAGATGACAAATATCTATCCTACTGTTTCAACTATCATGCCGGGTCTGCCTaGCAGGACCTTACTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQRATCQDDKYLSYCFNYHAGSA*QDLTSH Trigger: ATGGGAAGTAAGGTCCTGGCAGGCAGACCCGGCATG...ATAGTTGAAACAGTAGGATAGATATTTGTCATCTTGACAAGTAGCCCTTTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CCA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCCTTCTTCCTCCAACATaGCAACTAACTCTGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQPIRTLGSRPYSEDIITLLPPT*QLTLIW Trigger: CCAAATCAGAGTTAGTTGCCATGTTGGAGGAAGAAG...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| CDS-3UTR CCA 90 bp | GCCCTATTCCTACCTTACAAGCTAGCAGGTGACCTTGGGCAAGCCAACCTATTATTAGAAAGAAACGTTTaGTATCATTCGTCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ALFLPYKLAGDLGQANLLLERNV*YHSSRS Trigger: GGATCTGGACGAATGATACCAAACGTTTCTTTCTAA...TAATAGGTTGGCTTGCCCAAGGTCACCTGCTAGCTTGTAAGGTAGGAATAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR CAA 72 bp | GTGAACTTGCTTTCTGCATTTTCCAGCCATGTGCCATaGACCAGGAGTGAACTCAAGTATAAATTGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNLLSAFSSHVP*TRSELKYKLQR Trigger: CCTTTGCAATTTATACTTGAGTTCACTCCTGGTCAATGGCACATGGCTGGAAAATGCAGAAAGCAAGTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR TCA 90 bp | ATATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGAAGTGTGAAGTACACTTaGCTGTTTCCAAAGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IYQYPNAGSIPVQLSPARSVKYT*LFPKGE Trigger: CTCTCCCTTTGGAAACAGTCAAGTGTACTTCACACT...TCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR TCA 90 bp | AACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACAAGGACCATATAATCCAAAAGTTTTACTTTaGGCCCTATTCCTACCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NAGSIPVQLSPARQGPYNPKVLL*ALFLPY Trigger: GTAAGGTAGGAATAGGGCTCAAAGTAAAACTTTTGG...ATTATATGGTCCTTGTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR TCA 90 bp | TATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACGTGGACTGGGTAATTTaGAAAGCTCCTTTGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: YINIQTLVVYLCSCLLLDVDWVI*KAPLNM Trigger: CATGTTCAAAGGAGCTTTTCAAATTACCCAGTCCAC...GTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR GCA 90 bp | TTGCAAAGGGCTACTTGTCAAGATGACAAATATCTATCCTACTGTTTCAACTATCCTCATCAAGGCCGGTaGCTTTGGTTGCTGACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQRATCQDDKYLSYCFNYPHQGR*LWLLTF Trigger: AAACGTCAGCAACCAAAGGCACCGGCCTTGATGAGG...ATAGTTGAAACAGTAGGATAGATATTTGTCATCTTGACAAGTAGCCCTTTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR GCA 90 bp | TATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACTGGTGTTTTACCCATTaGCAGGCCTCTCATAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: YINIQTLVVYLCSCLLLDWCFTH*QASHKT Trigger: TGTTTTATGAGAGGCCTGGCAATGGGTAAAACACCA...GTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CCA 90 bp | CAATGGCATTTAAGACGAAATAGTATGCTCTGCTCCCCCACACATGTGCAGGTGATCTGTACAAAATTGTaGTTTTTCCTGCTCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: QWHLRRNSMLCSPTHVQVICTKL*FFLLHL Trigger: TAGATGGAGCAGGAAAAACCACAATTTTGTACAGAT...CACCTGCACATGTGTGGGGGAGCAGAGCATACTATTTCGTCTTAAATGCCATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS-3UTR GCA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCAACTCAAGTATAAATTaGAAAGGGCTACTTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQPIRTLGSRPYSEDIITNSSIN*KGLLVK Trigger: CTTGACAAGTAGCCCTTTGCAATTTATACTTGAGTT...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR CAA 72 bp | CCCATTGCCAGGCCTCTCATAAAACAATATTCAGATTaGCCATGTATATATCAATATCCAAACGCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PIARPLIKQYSD*PCIYQYPNAGS Trigger: ACTACCAGCGTTTGGATATTGATATATACATGGCAAATCTGAATATTGTTTTATGAGAGGCCTGGCAATGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CCA 90 bp | TTGCAAAGGGCTACTTGTCAAGATGACAAATATCTATCCTACTGTTTCAACTATCTTCTTCCTCCAACATaGCAACTAACTCTGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQRATCQDDKYLSYCFNYLLPPT*QLTLIW Trigger: CCAAATCAGAGTTAGTTGCCATGTTGGAGGAAGAAG...ATAGTTGAAACAGTAGGATAGATATTTGTCATCTTGACAAGTAGCCCTTTGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| 3UTR CAA 72 bp | ATACCAGATACTAGGGACATAAATATGAAAAAGTCTTaGCCCCTCAGGAGTAATATTGGTTGTACTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: IPDTRDINMKKS*PLRSNIGCTGT Trigger: TGTTCCAGTACAACCAATATTACTCCTGAGGGGCAAAGACTTTTTCATATTTATGTCCCTAGTATCTGGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CCA 90 bp | TTGCAAAGGGCTACTTGTCAAGATGACAAATATCTATCCTACTGTTTCAACTATATCTGTACAAAATTGTaGTTTTTCCTGCTCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: LQRATCQDDKYLSYCFNYICTKL*FFLLHL Trigger: TAGATGGAGCAGGAAAAACCACAATTTTGTACAGAT...ATAGTTGAAACAGTAGGATAGATATTTGTCATCTTGACAAGTAGCCCTTTGCAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS TCA 90 bp | AAGCCACCCATGATGAACCCCCTGTCCTCCCTCGCCGATCTTCAGTaGTTCCTTGGCCTTCGGCTGCAGCTCCGAGGCGGTTTCCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: KPPMMNPLSSLADLQ*FLGLRLQLRGGFLA Trigger: TGCGAGGAAACCGCCTCGGAGCTGCAGCCGAAGGCCAAGGAATCACTGAAGATCGGCGAGGGAGGACAGGGGGTTCATCATGGGTGGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000261636.13 ENST00000549283.1 ENST00000549302.1 ENST00000551092.5 ENST00000551671.5 |
||
| CDS TCA 90 bp | CCAATGGCCATGATGAACCCCCTGTCCTCCCTCGCCGATCTTCAGTaGTTCCTTGGCCTTCGGCTGCAGCTCCGAGGCGGTTTCCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PMAMMNPLSSLADLQ*FLGLRLQLRGGFLA Trigger: TGCGAGGAAACCGCCTCGGAGCTGCAGCCGAAGGCCAAGGAATCACTGAAGATCGGCGAGGGAGGACAGGGGGTTCATCATGGCCATTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539055.5 |
||
| CDS CCA 90 bp | CATGATGAACCCCCTGTCCTCCCTCGCCGATCTTCAGTGATTCCTTaGCCTTCGGCTGCAGCTCCGAGGCGGTTTCCTCGCAAGCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HDEPPVLPRRSSVIP*PSAAAPRRFPRKPS Trigger: ACTGGGCTTGCGAGGAAACCGCCTCGGAGCTGCAGCCGAAGGCCAAGGAATCACTGAAGATCGGCGAGGGAGGACAGGGGGTTCATCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000261636.13 ENST00000539055.5 ENST00000549283.1 ENST00000549302.1 ENST00000551092.5 ENST00000551671.5 ENST00000551688.1 |
||
| CDS TCA 90 bp | GGCCGCAGCTCATCTTTCACCAAGAAACCTCGGCGAACCTGCGACTaGCGCGTTGCCAGCCTCCGCAAGAACAACTCTGCCCAGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRSSSFTKKPRRTCD*RVASLRKNNSAQQV Trigger: CACTTGCTGGGCAGAGTTGTTCTTGCGGAGGCTGGCAACGCGTCAGTCGCAGGTTCGCCGAGGTTTCTTGGTGAAAGATGAGCTGCGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548070.1 |
||
| CDS TCA 90 bp | CTTCTTCCCATGATGAACCCCCTGTCCTCCCTCGCCGATCTTCAGTaGTTCCTTGGCCTTCGGCTGCAGCTCCGAGGCGGTTTCCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLPMMNPLSSLADLQ*FLGLRLQLRGGFLA Trigger: TGCGAGGAAACCGCCTCGGAGCTGCAGCCGAAGGCCAAGGAATCACTGAAGATCGGCGAGGGAGGACAGGGGGTTCATCATGGGAAGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551688.1 |
||
| CDS GCA 90 bp | CTCATCTTTCACCAAGAAACCTCGGCGAACCTGCGACTGACGCGTTaGCAGCCTCCGCAAGAACAACTCTGCCCAGCAAGTGGAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LIFHQETSANLRLTR*QPPQEQLCPASGAG Trigger: CCCAGCTCCACTTGCTGGGCAGAGTTGTTCTTGCGGAGGCTGGCAACGCGTCAGTCGCAGGTTCGCCGAGGTTTCTTGGTGAAAGATGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548070.1 |
||
| CDS CCA 90 bp | GCCGTCCCAGCGCCCCTGGTAAAGAGAATGATTAAGCTTCCACTCTaGGGCCGCAGCTCATCTTTCACCAAGAAACCTCGGCGAACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AVPAPLVKRMIKLPL*GRSSSFTKKPRRTC Trigger: GCAGGTTCGCCGAGGTTTCTTGGTGAAAGATGAGCTGCGGCCCCAGAGTGGAAGCTTAATCATTCTCTTTACCAGGGGCGCTGGGACGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548070.1 |
||
| CDS GCA 90 bp | AGCCACCTGCGACTGACGCGTTGCCAGCCTCCGCAAGAACAACTCTaGCCAGCAAGTGGAGCTGGGGATGAGGGAAAACTTCATGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: SHLRLTRCQPPQEQL*PASGAGDEGKLHDK Trigger: CTTATCATGAAGTTTTCCCTCATCCCCAGCTCCACTTGCTGGGCAGAGTTGTTCTTGCGGAGGCTGGCAACGCGTCAGTCGCAGGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551828.5 |
||
| CDS GCA 90 bp | GCGAACCTGCGACTGACGCGTTGCCAGCCTCCGCAAGAACAACTCTaGCCAGCAAGTGGAGCTGGGGATGAGGGAAAACTTCATGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: ANLRLTRCQPPQEQL*PASGAGDEGKLHDK Trigger: CTTATCATGAAGTTTTCCCTCATCCCCAGCTCCACTTGCTGGGCAGAGTTGTTCTTGCGGAGGCTGGCAACGCGTCAGTCGCAGGTTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548070.1 |
||
| CDS CCA 90 bp | AGCCCATCTGCAGACATCCTCCAGAACTCACTTGTAATAAGGTCATaGCTGGGTGGTCAAAGGGCAGGTGTCCCATCCCTTTTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPSADILQNSLVIRS*LGGQRAGVPSLFSA Trigger: GGCAGAGAAAAGGGATGGGACACCTGCCCTTTGACCACCCAGCCATGACCTTATTACAAGTGAGTTCTGGAGGATGTCTGCAGATGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549302.1 |
||
| CDS GCA 90 bp | GCATGGACACAGCCATGGCTGCAGCTTTCAATCTCACAGCCCATCTaGAGACATCCTCCAGAACTCACTTGTAATAAGGTCATGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AWTQPWLQLSISQPI*RHPPELTCNKVMAG Trigger: CCCAGCCATGACCTTATTACAAGTGAGTTCTGGAGGATGTCTGCAGATGGGCTGTGAGATTGAAAGCTGCAGCCATGGCTGTGTCCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549302.1 |
||
| CDS-3UTR CAA 90 bp | CAACTTCATGCCCTAGGATTCAAGATGGCCAGCGGCTACATGCCGGGTCTGCCTCTTACTTCCCATTTTTaGCAGTTTTCCTGGACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QLHALGFKMASGYMPGLPLTSHF*QFSWTA Trigger: GGCAGTCCAGGAAAACTGCAAAAAATGGGAAGTAAG...AGGCAGACCCGGCATGTAGCCGCTGGCCATCTTGAATCCTAGGGCATGAAGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS GCA 90 bp | GCAAGCACACACAAATGCACAGATGGCTTCTGGAAGCATGATACTTaGCATTCCATTGCCTCATCAAGGCCGGTGCCTTTGGTTGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ASTHKCTDGFWKHDT*HSIASSRPVPLVAD Trigger: GTCAGCAACCAAAGGCACCGGCCTTGATGAGGCAATGGAATGGCAAGTATCATGCTTCCAGAAGCCATCTGTGCATTTGTGTGTGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551671.5 |
||
| CDS CCA 90 bp | TGCAGACATCCTCCAGAACTCACTTGTAATAAGGTCATGGCTGGGTaGTCAAAGGGCAGGTGTCCCATCCCTTTTCTCTGCCATCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRHPPELTCNKVMAG*SKGRCPIPFLCHPS Trigger: AGAAGGATGGCAGAGAAAAGGGATGGGACACCTGCCCTTTGACCACCCAGCCATGACCTTATTACAAGTGAGTTCTGGAGGATGTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549302.1 |
||
| CDS CCA 90 bp | TGGACGTGCATAGCTGCAAGCACACACAAATGCACAGATGGCTTCTaGAAGCATGATACTTGCCATTCCATTGCCTCATCAAGGCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WTCIAASTHKCTDGF*KHDTCHSIASSRPV Trigger: CACCGGCCTTGATGAGGCAATGGAATGGCAAGTATCATGCTTCCAGAAGCCATCTGTGCATTTGTGTGTGCTTGCAGCTATGCACGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551671.5 |
||
| CDS-3UTR CAA 90 bp | CAATGGCATTTAAGACGAAATAGTATGCTCTGCTCCCCCACACATGTGCAGGTGATCTTCAGTGATTCCTaGGCCTTCGGCTGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QWHLRRNSMLCSPTHVQVIFSDS*AFGCSS Trigger: GGAGCTGCAGCCGAAGGCCAAGGAATCACTGAAGAT...CACCTGCACATGTGTGGGGGAGCAGAGCATACTATTTCGTCTTAAATGCCATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS TCA 90 bp | CATAGCTGCAAGCACACACAAATGCACAGATGGCTTCTGGAAGCATaGTACTTGCCATTCCATTGCCTCATCAAGGCCGGTGCCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HSCKHTQMHRWLLEA*YLPFHCLIKAGAFG Trigger: ACCAAAGGCACCGGCCTTGATGAGGCAATGGAATGGCAAGTATCATGCTTCCAGAAGCCATCTGTGCATTTGTGTGTGCTTGCAGCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551671.5 |
||
| CDS-3UTR CAA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCATCTTCAGTGATTCCTaGGCCTTCGGCTGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQPIRTLGSRPYSEDIITIFSDS*AFGCSS Trigger: GGAGCTGCAGCCGAAGGCCAAGGAATCACTGAAGAT...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| CDS-3UTR CAA 90 bp | CAACTTCATGCCCTAGGATTCAAGATGGCCAGCGGCTACATGCCGGGTCTGCCTCCATGTCCTGTTTATTaGCAAACACCACTAAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: QLHALGFKMASGYMPGLPPCPVY*QTPLKW Trigger: CCATTTTAGTGGTGTTTGCAAATAAACAGGACATGG...AGGCAGACCCGGCATGTAGCCGCTGGCCATCTTGAATCCTAGGGCATGAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CAA 90 bp | GCCCTATTCCTACCTTACAAGCTAGCAGGTGACCTTGGGCAAGCCAACCTATTATCAAGGCCGGTGCCTTaGGTTGCTGACGTTTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ALFLPYKLAGDLGQANLLSRPVP*VADVLN Trigger: ATTCAAAACGTCAGCAACCAAAGGCACCGGCCTTGA...TAATAGGTTGGCTTGCCCAAGGTCACCTGCTAGCTTGTAAGGTAGGAATAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CAA 90 bp | CAATGGCATTTAAGACGAAATAGTATGCTCTGCTCCCCCACACATGTGCAGGTGTCAAGGCCGGTGCCTTaGGTTGCTGACGTTTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QWHLRRNSMLCSPTHVQVSRPVP*VADVLN Trigger: ATTCAAAACGTCAGCAACCAAAGGCACCGGCCTTGA...CACCTGCACATGTGTGGGGGAGCAGAGCATACTATTTCGTCTTAAATGCCATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS-3UTR CAA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCCAACTAACCATTCCATaGCCTCATCAAGGCCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQPIRTLGSRPYSEDIITQLTIP*PHQGRC Trigger: GCACCGGCCTTGATGAGGCAATGGAATGGTTAGTTG...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| CDS GCA 90 bp | AAGCTAAACTTCAGTTCTAAACTACAGCATGGACACAGCCATGGCTaGAGCTTTCAATCTCACAGCCCATCTGCAGACATCCTCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KLNFSSKLQHGHSHG*SFQSHSPSADILQN Trigger: GTTCTGGAGGATGTCTGCAGATGGGCTGTGAGATTGAAAGCTGCAGCCATGGCTGTGTCCATGCTGTAGTTTAGAACTGAAGTTTAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549302.1 |
||
| CDS-3UTR CAA 90 bp | TATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACATCTTCAGTGATTCCTaGGCCTTCGGCTGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YINIQTLVVYLCSCLLLDIFSDS*AFGCSS Trigger: GGAGCTGCAGCCGAAGGCCAAGGAATCACTGAAGAT...GTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CAA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCTCAAGGCCGGTGCCTTaGGTTGCTGACGTTTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SQPIRTLGSRPYSEDIITSRPVP*VADVLN Trigger: ATTCAAAACGTCAGCAACCAAAGGCACCGGCCTTGA...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| CDS GCA 90 bp | GAGAAAAATTACACGTGGACGTGCATAGCTGCAAGCACACACAAATaGACAGATGGCTTCTGGAAGCATGATACTTGCCATTCCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EKNYTWTCIAASTHK*TDGFWKHDTCHSIA Trigger: GGCAATGGAATGGCAAGTATCATGCTTCCAGAAGCCATCTGTGCATTTGTGTGTGCTTGCAGCTATGCACGTCCACGTGTAATTTTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551671.5 |
||
| CDS-3UTR CAA 90 bp | TATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACCAACTAACCATTCCATaGCCTCATCAAGGCCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YINIQTLVVYLCSCLLLDQLTIP*PHQGRC Trigger: GCACCGGCCTTGATGAGGCAATGGAATGGTTAGTTG...GTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS GCA 90 bp | ATCAAAGTTTCATCCTCAACACGGGAGAAAAATTACACGTGGACGTaGATAGCTGCAAGCACACACAAATGCACAGATGGCTTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IKVSSSTREKNYTWT*IAASTHKCTDGFWK Trigger: CTTCCAGAAGCCATCTGTGCATTTGTGTGTGCTTGCAGCTATGCACGTCCACGTGTAATTTTTCTCCCGTGTTGAGGATGAAACTTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551671.5 |
||
| CDS-3UTR CAA 90 bp | CAATGGCATTTAAGACGAAATAGTATGCTCTGCTCCCCCACACATGTGCAGGTGTTGGTTGCTGACGTTTaGAATATCTGCCATTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QWHLRRNSMLCSPTHVQVLVADV*NICHFR Trigger: CCGAAAATGGCAGATATTCAAAACGTCAGCAACCAA...CACCTGCACATGTGTGGGGGAGCAGAGCATACTATTTCGTCTTAAATGCCATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS-3UTR CAA 90 bp | AACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACAAGGACCATATAATAGTATACCTGTGCAGTaGTCTCCTGCTAGACAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NAGSIPVQLSPARQGPYNSIPVQ*SPARQG Trigger: TCCTTGTCTAGCAGGAGACAACTGCACAGGTATACT...ATTATATGGTCCTTGTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CAA 90 bp | GCCCTATTCCTACCTTACAAGCTAGCAGGTGACCTTGGGCAAGCCAACCTATTAGTTCTGATTTCAAGTTaGGTGTTTTACCCATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALFLPYKLAGDLGQANLLVLISS*VFYPLP Trigger: TGGCAATGGGTAAAACACCAAACTTGAAATCAGAAC...TAATAGGTTGGCTTGCCCAAGGTCACCTGCTAGCTTGTAAGGTAGGAATAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CAA 90 bp | CAATGGCATTTAAGACGAAATAGTATGCTCTGCTCCCCCACACATGTGCAGGTGCCATGTCCTGTTTATTaGCAAACACCACTAAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: QWHLRRNSMLCSPTHVQVPCPVY*QTPLKW Trigger: CCATTTTAGTGGTGTTTGCAAATAAACAGGACATGG...CACCTGCACATGTGTGGGGGAGCAGAGCATACTATTTCGTCTTAAATGCCATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS-3UTR CAA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCTTGGTTGCTGACGTTTaGAATATCTGCCATTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SQPIRTLGSRPYSEDIITLVADV*NICHFR Trigger: CCGAAAATGGCAGATATTCAAAACGTCAGCAACCAA...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| CDS-3UTR CAA 90 bp | AACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACAAGGACCATATAATTACAGGAGTGGCCATTaGCACCTATGTTCTGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: NAGSIPVQLSPARQGPYNYRSGH*HLCSDF Trigger: GAAATCAGAACATAGGTGCAAATGGCCACTCCTGTA...ATTATATGGTCCTTGTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CAA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCTGGAATTTAAGGTTTTaGTACGTCACCGTCTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: SQPIRTLGSRPYSEDIITWNLRF*YVTVST Trigger: TGTAGAGACGGTGACGTACAAAAACCTTAAATTCCA...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| CDS-3UTR CAA 90 bp | AGCCAACCTATTAGAACCCTGGGTTCACGTCCATACAGTGAAGACATCATAACCCCATGTCCTGTTTATTaGCAAACACCACTAAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SQPIRTLGSRPYSEDIITPCPVY*QTPLKW Trigger: CCATTTTAGTGGTGTTTGCAAATAAACAGGACATGG...GGTTATGATGTCTTCACTGTATGGACGTGAACCCAGGGTTCTAATAGGTTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000261636.13 ENST00000539055.5 |
||
| CDS-3UTR CAA 90 bp | TTGCAAAGGGCTACTTGTCAAGATGACAAATATCTATCCTACTGTTTCAACTATTCCAGCCATGTGCCATaGACCAGGAGTGAACTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQRATCQDDKYLSYCFNYSSHVP*TRSELK Trigger: CTTGAGTTCACTCCTGGTCAATGGCACATGGCTGGA...ATAGTTGAAACAGTAGGATAGATATTTGTCATCTTGACAAGTAGCCCTTTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CAA 90 bp | CCATGTATATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTTTGGTTGCTGACGTTTaGAATATCTGCCATTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PCIYQYPNAGSIPVQLSPLVADV*NICHFR Trigger: CCGAAAATGGCAGATATTCAAAACGTCAGCAACCAA...AGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATATACATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CAA 90 bp | TATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGCTAGACACCAAAAGTTTTACTTaGAGCCCTATTCCTACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: YINIQTLVVYLCSCLLLDTKSFT*SPIPTL Trigger: TAAGGTAGGAATAGGGCTCAAAGTAAAACTTTTGGT...GTCTAGCAGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS-3UTR CAA 90 bp | CCATGTATATATCAATATCCAAACGCTGGTAGTATACCTGTGCAGTTGTCTCCTGTTAGAAAGAAACGTTaGGTATCATTCGTCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: PCIYQYPNAGSIPVQLSPVRKKR*VSFVQI Trigger: GATCTGGACGAATGATACCAAACGTTTCTTTCTAAC...AGGAGACAACTGCACAGGTATACTACCAGCGTTTGGATATTGATATATACATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261636.13 |
||
| CDS CCA 90 bp | CCCACACATGTTAGAATCAATGCCTTAATGATTCACTGTTTCTGGTaGATATATGTACCATATCCCTCAGATGTGATGGAGTCAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PTHVRINALMIHCFW*IYVPYPSDVMESKE Trigger: TTCTTTTGACTCCATCACATCTGAGGGATATGGTACATATATCCACCAGAAACAGTGAATCATTAAGGCATTGATTCTAACATGTGTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550597.1 |
||
| CDS CCA 90 bp | TGTCCCACACATGTTAGAATCAATGCCTTAATGATTCACTGTTTCTaGTGGATATATGTACCATATCCCTCAGATGTGATGGAGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CPTHVRINALMIHCF*WIYVPYPSDVMESK Trigger: TTTTGACTCCATCACATCTGAGGGATATGGTACATATATCCACCAGAAACAGTGAATCATTAAGGCATTGATTCTAACATGTGTGGGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550597.1 |
||
| CDS-3UTR CAA 90 bp | TTAAGGTTTTTGTACGTCACCGTCTCTACATTAAATCCAATGGCATTTAAGACGTGGAATTTAAGGTTTTaGTACGTCACCGTCTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: LRFLYVTVSTLNPMAFKTWNLRF*YVTVST Trigger: TGTAGAGACGGTGACGTACAAAAACCTTAAATTCCA...CGTCTTAAATGCCATTGGATTTAATGTAGAGACGGTGACGTACAAAAACCTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551092.5 |
||
| CDS CCA 72 bp | CCCCCTGTCCTCCCTCGCCGATCTTCAGTGATTCCTTaGCCTTCGGCTGCAGCTCCGAGGCGGTTTCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PPVLPRRSSVIP*PSAAAPRRFPR Trigger: GCGAGGAAACCGCCTCGGAGCTGCAGCCGAAGGCCAAGGAATCACTGAAGATCGGCGAGGGAGGACAGGGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000261636.13 ENST00000539055.5 ENST00000549283.1 ENST00000549302.1 ENST00000551092.5 ENST00000551671.5 ENST00000551688.1 |
||
| CDS CAA 72 bp | ACCCCCTGTCCTCCCTCGCCGATCTTCAGTGATTCCTaGGCCTTCGGCTGCAGCTCCGAGGCGGTTTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: TPCPPSPIFSDS*AFGCSSEAVSS Trigger: CGAGGAAACCGCCTCGGAGCTGCAGCCGAAGGCCAAGGAATCACTGAAGATCGGCGAGGGAGGACAGGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000261636.13 ENST00000539055.5 ENST00000549283.1 ENST00000549302.1 ENST00000551092.5 ENST00000551671.5 ENST00000551688.1 |
||
| CDS GCA 72 bp | CTTCATGATAAGGGTAAAGAACTCGAACCCAGGCTCTaGGGACGTCCCCAAGCTGTCCGGGTCCCTGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: LHDKGKELEPRL*GRPQAVRVPGP Trigger: GGGTCCAGGGACCCGGACAGCTTGGGGACGTCCGCAGAGCCTGGGTTCGAGTTCTTTACCCTTATCATGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000548070.1 ENST00000551828.5 |
||
| CDS GCA 72 bp | CACCAAGAAACCTCGGCGAACCTGCGACTGACGCGTTaGCAGCCTCCGCAAGAACAACTCTGCCCAGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HQETSANLRLTR*QPPQEQLCPAS Trigger: ACTTGCTGGGCAGAGTTGTTCTTGCGGAGGCTGGCAACGCGTCAGTCGCAGGTTCGCCGAGGTTTCTTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548070.1 |
||
| CDS CAA 72 bp | TCACCAAGAAACCTCGGCGAACCTGCGACTGACGCGTaGCCAGCCTCCGCAAGAACAACTCTGCCCAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SPRNLGEPATDA*PASARTTLPSK Trigger: CTTGCTGGGCAGAGTTGTTCTTGCGGAGGCTGGCAACGCGTCAGTCGCAGGTTCGCCGAGGTTTCTTGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548070.1 |
||
| CDS CAA 90 bp | GCTCATCTTTCACCAAGAAACCTCGGCGAACCTGCGACTGACGCGTaGCCAGCCTCCGCAAGAACAACTCTGCCCAGCAAGTGGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AHLSPRNLGEPATDA*PASARTTLPSKWSW Trigger: CCAGCTCCACTTGCTGGGCAGAGTTGTTCTTGCGGAGGCTGGCAACGCGTCAGTCGCAGGTTCGCCGAGGTTTCTTGGTGAAAGATGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548070.1 |
||
| CDS GCA 72 bp | CGACTGACGCGTTGCCAGCCTCCGCAAGAACAACTCTaGCCAGCAAGTGGAGCTGGGGATGAGGGAAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: RLTRCQPPQEQL*PASGAGDEGKL Trigger: AAGTTTTCCCTCATCCCCAGCTCCACTTGCTGGGCAGAGTTGTTCTTGCGGAGGCTGGCAACGCGTCAGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548070.1 ENST00000551828.5 |
||
| CDS TCA 72 bp | TCATCTTTCACCAAGAAACCTCGGCGAACCTGCGACTaGCGCGTTGCCAGCCTCCGCAAGAACAACTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSFTKKPRRTCD*RVASLRKNNSA Trigger: GGCAGAGTTGTTCTTGCGGAGGCTGGCAACGCGTCAGTCGCAGGTTCGCCGAGGTTTCTTGGTGAAAGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548070.1 |
||
| CDS CCA 72 bp | GCGCCCCTGGTAAAGAGAATGATTAAGCTTCCACTCTaGGGCCGCAGCTCATCTTTCACCAAGAAACCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: APLVKRMIKLPL*GRSSSFTKKPR Trigger: CCGAGGTTTCTTGGTGAAAGATGAGCTGCGGCCCCAGAGTGGAAGCTTAATCATTCTCTTTACCAGGGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548070.1 |
||
| CDS GCA 72 bp | ATATACTTGAGAAAAAGCCACCTGCGACTGACGCGTTaGCAGCCTCCGCAAGAACAACTCTGCCCAGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: IYLRKSHLRLTR*QPPQEQLCPAS Trigger: ACTTGCTGGGCAGAGTTGTTCTTGCGGAGGCTGGCAACGCGTCAGTCGCAGGTGGCTTTTTCTCAAGTATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551828.5 |
||
| CDS CCA 72 bp | CCTCCAGAACTCACTTGTAATAAGGTCATGGCTGGGTaGTCAAAGGGCAGGTGTCCCATCCCTTTTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PPELTCNKVMAG*SKGRCPIPFLC Trigger: GCAGAGAAAAGGGATGGGACACCTGCCCTTTGACCACCCAGCCATGACCTTATTACAAGTGAGTTCTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549302.1 |
||
| CDS CCA 72 bp | GCAGACATCCTCCAGAACTCACTTGTAATAAGGTCATaGCTGGGTGGTCAAAGGGCAGGTGTCCCATCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ADILQNSLVIRS*LGGQRAGVPSL Trigger: AAGGGATGGGACACCTGCCCTTTGACCACCCAGCCATGACCTTATTACAAGTGAGTTCTGGAGGATGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549302.1 |
||
| CDS CAA 72 bp | AATATACTTGAGAAAAAGCCACCTGCGACTGACGCGTaGCCAGCCTCCGCAAGAACAACTCTGCCCAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: NILEKKPPATDA*PASARTTLPSK Trigger: CTTGCTGGGCAGAGTTGTTCTTGCGGAGGCTGGCAACGCGTCAGTCGCAGGTGGCTTTTTCTCAAGTATATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551828.5 |
||
| CDS CAA 72 bp | CAGATGGCTTCTGGAAGCATGATACTTGCCATTCCATaGCCTCATCAAGGCCGGTGCCTTTGGTTGCTGACG | + |
|
Preference number: 6 (lower is better) Translates to: QMASGSMILAIP*PHQGRCLWLLT Trigger: CGTCAGCAACCAAAGGCACCGGCCTTGATGAGGCAATGGAATGGCAAGTATCATGCTTCCAGAAGCCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551671.5 |
||
| CDS CAA 72 bp | GCCTCATCAAGGCCGGTGCCTTTGGTTGCTGACGTTTaGAATATCTGCCATTTTCGGTCCTTCAAGGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASSRPVPLVADV*NICHFRSFKAG Trigger: ACCTGCCTTGAAGGACCGAAAATGGCAGATATTCAAAACGTCAGCAACCAAAGGCACCGGCCTTGATGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000261636.13 ENST00000536227.5 ENST00000539055.5 ENST00000550597.1 ENST00000551671.5 ENST00000551688.1 ENST00000551828.5 |
||
| CDS TCA 72 bp | CAACATAAGCAACACCTGCTCTCAGGTTTTTCAAACTaGCGCCGTCCCAGCGCCCCTGGTAAAGAGAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: QHKQHLLSGFSN*RRPSAPGKEND Trigger: ATCATTCTCTTTACCAGGGGCGCTGGGACGGCGTCAGTTTGAAAAACCTGAGAGCAGGTGTTGCTTATGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548070.1 |
||
| CDS GCA 72 bp | CAGCCATGGCTGCAGCTTTCAATCTCACAGCCCATCTaGAGACATCCTCCAGAACTCACTTGTAATAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QPWLQLSISQPI*RHPPELTCNKV Trigger: GACCTTATTACAAGTGAGTTCTGGAGGATGTCTGCAGATGGGCTGTGAGATTGAAAGCTGCAGCCATGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549302.1 |
||
| CDS CAA 90 bp | CATTCCATTGCCTCATCAAGGCCGGTGCCTTTGGTTGCTGACGTTTaGAATATCTGCCATTTTCGGTCCTTCAAGGCAGGTAACCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HSIASSRPVPLVADV*NICHFRSFKAGNPS Trigger: ACTTGGGTTACCTGCCTTGAAGGACCGAAAATGGCAGATATTCAAAACGTCAGCAACCAAAGGCACCGGCCTTGATGAGGCAATGGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000261636.13 ENST00000536227.5 ENST00000539055.5 ENST00000550597.1 ENST00000551671.5 ENST00000551688.1 ENST00000551828.5 |
||
| CDS GCA 72 bp | TTCAGTTCTAAACTACAGCATGGACACAGCCATGGCTaGAGCTTTCAATCTCACAGCCCATCTGCAGACATC | + |
|
Preference number: 6 (lower is better) Translates to: FSSKLQHGHSHG*SFQSHSPSADI Trigger: GATGTCTGCAGATGGGCTGTGAGATTGAAAGCTGCAGCCATGGCTGTGTCCATGCTGTAGTTTAGAACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549302.1 |
||
| CDS GCA 72 bp | TCATCCTCAACACGGGAGAAAAATTACACGTGGACGTaGATAGCTGCAAGCACACACAAATGCACAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSTREKNYTWT*IAASTHKCTDG Trigger: GCCATCTGTGCATTTGTGTGTGCTTGCAGCTATGCACGTCCACGTGTAATTTTTCTCCCGTGTTGAGGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551671.5 |
||
| CDS CCA 72 bp | ATAGCTGCAAGCACACACAAATGCACAGATGGCTTCTaGAAGCATGATACTTGCCATTCCATTGCCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: IAASTHKCTDGF*KHDTCHSIASS Trigger: TGATGAGGCAATGGAATGGCAAGTATCATGCTTCCAGAAGCCATCTGTGCATTTGTGTGTGCTTGCAGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551671.5 |
||
| CDS TCA 72 bp | GTTTCTGGTGGATATATGTACCATATCCCTCAGATGTaGTGGAGTCAAAAGAATGTTGATAAACATTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSGGYMYHIPQM*WSQKNVDKHWL Trigger: CAGCCAATGTTTATCAACATTCTTTTGACTCCATCACATCTGAGGGATATGGTACATATATCCACCAGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550597.1 |
||
| CDS CCA 72 bp | GTTAGAATCAATGCCTTAATGATTCACTGTTTCTGGTaGATATATGTACCATATCCCTCAGATGTGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VRINALMIHCFW*IYVPYPSDVME Trigger: CTCCATCACATCTGAGGGATATGGTACATATATCCACCAGAAACAGTGAATCATTAAGGCATTGATTCTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550597.1 |
||
| CDS CCA 72 bp | CATGTTAGAATCAATGCCTTAATGATTCACTGTTTCTaGTGGATATATGTACCATATCCCTCAGATGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: HVRINALMIHCF*WIYVPYPSDVM Trigger: CATCACATCTGAGGGATATGGTACATATATCCACCAGAAACAGTGAATCATTAAGGCATTGATTCTAACATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550597.1 |
||