RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARID5A (Homo sapiens)

Ensembl gene IDs: ENSG00000196843

Ensembl transcript IDs: ENST00000357485.8, ENST00000412735.5, ENST00000454558.2, ENST00000467498.5, ENST00000470579.5, ENST00000497920.1, ENST00000673792.1

Found 453 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGGGGCGCTGCATAGGTTGTGACTGGTGGTGCGTGCCAGGCAGATaGGGCCGGGCAAAGTCTGTGGCGGAGGGCACTGTCGAAGGACGT +
Preference number: 1 (lower is better)
Translates to: VGRCIGCDWWCVPGR*GRAKSVAEGTVEGR
Trigger: ACGTCCTTCGACAGTGCCCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACCAGTCACAACCTATGCAGCGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CCA 90 bp CGGCTGGGACCTTGGCCATGGGGGACACCCAGCAGGCTTTGGGCTTaGGGTAGAGGATGCCCTTTCTGGAGCCACCTTTATGGAACGCAG +
Preference number: 1 (lower is better)
Translates to: RLGPWPWGTPSRLWA*GRGCPFWSHLYGTQ
Trigger: CTGCGTTCCATAAAGGTGGCTCCAGAAAGGGCATCCTCTACCCCAAGCCCAAAGCCTGCTGGGTGTCCCCCATGGCCAAGGTCCCAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CCA 90 bp GGCTCTCGGCTGGGACCTTGGCCATGGGGGACACCCAGCAGGCTTTaGGCTTGGGGTAGAGGATGCCCTTTCTGGAGCCACCTTTATGGA +
Preference number: 1 (lower is better)
Translates to: GSRLGPWPWGTPSRL*AWGRGCPFWSHLYG
Trigger: TCCATAAAGGTGGCTCCAGAAAGGGCATCCTCTACCCCAAGCCCAAAGCCTGCTGGGTGTCCCCCATGGCCAAGGTCCCAGCCGAGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CCA 90 bp AGTAGAAGCTGGATAGGAGCCGCTTGTAGGCCTCAGGACAGCCGCTaGCACCCACAAAGGACACAGAAGACCCAGAGGCCAGGCCCTGCT +
Preference number: 1 (lower is better)
Translates to: SRSWIGAACRPQDSR*HPQRTQKTQRPGPA
Trigger: AGCAGGGCCTGGCCTCTGGGTCTTCTGTGTCCTTTGTGGGTGCCAGCGGCTGTCCTGAGGCCTACAAGCGGCTCCTATCCAGCTTCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR TCA 90 bp CTTATAACAACTGGGTCCTCTGCTCCTGGGCTCAGGCTGCTGCCTTaGGATAAACCCAGTTTTCCCACTGCCTTCTTCTTCACTTGTGCC +
Preference number: 1 (lower is better)
Translates to: LITTGSSAPGLRLLP*DKPSFPTAFFFTCA
Trigger: GGCACAAGTGAAGAAGAAGGCAGTGGGAAAACTGGGTTTATCTCAAGGCAGCAGCCTGAGCCCAGGAGCAGAGGACCCAGTTGTTATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR-3UTR GCA 90 bp AGCCGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGCGTAGTGGCGGCGCGTaGACGTGGCCGCGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: SRCLEFSVSPLGLWGLSGRSGGA*TWPRWC
Trigger: GCACCAGCGCGGCCACGTGCACGCGCCGCCACTACG...CCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp GTGACTGGTGGTGCGTGCCAGGCAGATGAGGCCGGGCAAAGTCTGTGGCGGAGGTGCCGGGCAGGGGCCTaGCTGCGCCTCCTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: VTGGACQADEAGQSLWRRCRAGA*LRLLSE
Trigger: CTCAGAGAGGAGGCGCAGGCAGGCCCCTGCCCGGCA...CCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACCAGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR CCA 90 bp GTGACTGGTGGTGCGTGCCAGGCAGATGAGGCCGGGCAAAGTCTGTGGCGGAGGTGCGCCGCTCCTCCTTaGCCTTCTTCGGCCTCTCGG +
Preference number: 2 (lower is better)
Translates to: VTGGACQADEAGQSLWRRCAAPP*PSSASR
Trigger: CCGAGAGGCCGAAGAAGGCCAAGGAGGAGCGGCGCA...CCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACCAGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR TCA 90 bp GGTGGTGCGTGCCAGGCAGATGAGGCCGGGCAAAGTCTGTGGCGGAGGGCACTGCTGGGGCTCTTTCACTaGCAGCCCCTCTTTGCCAGG +
Preference number: 2 (lower is better)
Translates to: GGACQADEAGQSLWRRALLGLFH*QPLFAR
Trigger: CCTGGCAAAGAGGGGCTGTCAGTGAAAGAGCCCCAG...CAGTGCCCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp GTGACTGGTGGTGCGTGCCAGGCAGATGAGGCCGGGCAAAGTCTGTGGCGGAGGCCCTCCTCCTGGCACTaGAAGGCCTCCACCTTGCTC +
Preference number: 2 (lower is better)
Translates to: VTGGACQADEAGQSLWRRPSSWH*KASTLL
Trigger: GAGCAAGGTGGAGGCCTTGCAGTGCCAGGAGGAGGG...CCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACCAGTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR CCA 90 bp GGTGGTGCGTGCCAGGCAGATGAGGCCGGGCAAAGTCTGTGGCGGAGGGCACTGTCCTGGGCTTGGAGGTaGGCAGCGGCTTGTCATCCT +
Preference number: 2 (lower is better)
Translates to: GGACQADEAGQSLWRRALSWAWR*AAACHP
Trigger: AGGATGACAAGCCGCTGCCCACCTCCAAGCCCAGGA...CAGTGCCCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGGTGCTGCCTGGGCTaGCCCCCAGCTCGTCGTACA +
Preference number: 2 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLWCCLG*PPARRT
Trigger: TGTACGACGAGCTGGGGGGCAGCCCAGGCAGCACCA...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CAA 90 bp AGGGCTGGGCCCAGAAGGCAGGAGACCAGGCCGGACCCTGCAGGTTaGGCCCCACACTTCTTGGCATCCGCCTCCTTAAGAAAGGGAGAC +
Preference number: 2 (lower is better)
Translates to: RAGPRRQETRPDPAG*APHFLASASLRKGD
Trigger: GTCTCCCTTTCTTAAGGAGGCGGATGCCAAGAAGTGTGGGGCCAAACCTGCAGGGTCCGGCCTGGTCTCCTGCCTTCTGGGCCCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR TCA 90 bp AGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGCCTACAGCTTGGCCTGCAATCCCTCCTaGGGGGTCAGCCGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: RPLSTPQCTQHHGLAYSLACNPS*GVSRCL
Trigger: CAGGCACCGGCTGACCCCTCAGGAGGGATTGCAGGC...CAAGCTGTAGGCCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp GGTGGTGCGTGCCAGGCAGATGAGGCCGGGCAAAGTCTGTGGCGGAGGGCACTGCTCCTGGGCTCAGGCTaGTGCCTTGAGATAAACCCA +
Preference number: 2 (lower is better)
Translates to: GGACQADEAGQSLWRRALLLGSG*CLEINP
Trigger: TGGGTTTATCTCAAGGCAGCAGCCTGAGCCCAGGAG...CAGTGCCCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCTCCTGGGCTCAGGCTaGTGCCTTGAGATAAACCCA +
Preference number: 2 (lower is better)
Translates to: FRGQPGCFELRSGAVGAALLGSG*CLEINP
Trigger: TGGGTTTATCTCAAGGCAGCAGCCTGAGCCCAGGAG...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR-3UTR CCA 90 bp AGCCGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGCAGGTGCCGCACGTATaGCAGGACCAGCCTCTCGTA +
Preference number: 2 (lower is better)
Translates to: SRCLEFSVSPLGLWGLSGQVPHV*QDQPLV
Trigger: TACGAGAGGCTGGTCCTGCCATACGTGCGGCACCTG...CCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR TCA 90 bp GGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCATCCTCTCAGGCTGCTGCCTTaGGATAAACCCAGTTTTCCC +
Preference number: 2 (lower is better)
Translates to: GQPGCFELRSGAVGAAHPLRLLP*DKPSFP
Trigger: GGGAAAACTGGGTTTATCTCAAGGCAGCAGCCTGAG...AGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR-3UTR CCA 90 bp CGTGTGTCCCCTTGCAGTAGAAGCTGGATAGGAGCCGCTTGTAGGCCTCAGGACCTTCGAGCTCCGCTCTaGGGCAGTGGGAGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: RVSPCSRSWIGAACRPQDLRAPL*GSGSCP
Trigger: TGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAG...GTCCTGAGGCCTACAAGCGGCTCCTATCCAGCTTCTACTGCAAGGGGACACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR CCA 90 bp GGTGGTGCGTGCCAGGCAGATGAGGCCGGGCAAAGTCTGTGGCGGAGGGCACTGCTGGAGCCACCTTTATaGAACGCAGAAGGGCGGTTA +
Preference number: 2 (lower is better)
Translates to: GGACQADEAGQSLWRRALLEPPL*NAEGRL
Trigger: TAACCGCCCTTCTGCGTTCCATAAAGGTGGCTCCAG...CAGTGCCCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp GTCGACTCCACAGTGTACACAACACCATGGGCTGGCCTACAGCTTGGTGTTGAGTGGGGCAGTGGGAGCTaGCCATCCTCTCCCAGCGCC +
Preference number: 2 (lower is better)
Translates to: VDSTVYTTPWAGLQLGVEWGSGS*PSSPSA
Trigger: GGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCCA...CTCAACACCAAGCTGTAGGCCAGCCCATGGTGTTGTGTACACTGTGGAGTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CAA 90 bp TTAGCCATCTTGTACTGTTTCCTGGGCTTGGAGGTGGGCAGCGGCTaGTCATCCTCCCCCTTCAGGTGCCGCACGTATGGCAGGACCAGC +
Preference number: 2 (lower is better)
Translates to: LAILYCFLGLEVGSG*SSSPFRCRTYGRTS
Trigger: GCTGGTCCTGCCATACGTGCGGCACCTGAAGGGGGAGGATGACAAGCCGCTGCCCACCTCCAAGCCCAGGAAACAGTACAAGATGGCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp GAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTTCTTCTTCACTTGTaGCAGGCTGCCCAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: ELPILSQRLITTGSSAPGLLLHL*QAAQPG
Trigger: CCCTGGCTGGGCAGCCTGGCACAAGTGAAGAAGAAG...CCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR-3UTR GCA 90 bp GGTGGTGCGTGCCAGGCAGATGAGGCCGGGCAAAGTCTGTGGCGGAGGGCACTGACCCAGTTTTCCCACTaGCTTCTTCTTCACTTGTGC +
Preference number: 2 (lower is better)
Translates to: GGACQADEAGQSLWRRALTQFSH*LLLHLC
Trigger: GCACAAGTGAAGAAGAAGGCAGTGGGAAAACTGGGT...CAGTGCCCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp GTCGACTCCACAGTGTACACAACACCATGGGCTGGCCTACAGCTTGGTGTTGAGCGTGGGCAACCTGGGTaGTTCGAGCTCCGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: VDSTVYTTPWAGLQLGVERGQPG*FELRSG
Trigger: CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACG...CTCAACACCAAGCTGTAGGCCAGCCCATGGTGTTGTGTACACTGTGGAGTCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCCCAGGCTGCGCTTGCTaGCCAGGCCTGGGCTACTGG +
Preference number: 2 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLPGCAC*PGLGYW
Trigger: CCAGTAGCCCAGGCCTGGGCAGCAAGCGCAGCCTGG...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR CCA 90 bp GAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGATGGCCCGGGTGTCCTaGGTAGCAGGCACTAGTTCA +
Preference number: 2 (lower is better)
Translates to: ELPILSQRLITTGSSAPGMARVS*VAGTSS
Trigger: TGAACTAGTGCCTGCTACCCAGGACACCCGGGCCAT...CCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR-3UTR TCA 90 bp TTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGCTCAGGCTGCTGCCTTaGGATAAACCCAGTTTTCCC +
Preference number: 2 (lower is better)
Translates to: LDFPWATWVLRAPLWGSGLRLLP*DKPSFP
Trigger: GGGAAAACTGGGTTTATCTCAAGGCAGCAGCCTGAG...CCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR-3UTR GCA 90 bp CGTGTGTCCCCTTGCAGTAGAAGCTGGATAGGAGCCGCTTGTAGGCCTCAGGACCTTCTTCTTCACTTGTaGCAGGCTGCCCAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: RVSPCSRSWIGAACRPQDLLLHL*QAAQPG
Trigger: CCCTGGCTGGGCAGCCTGGCACAAGTGAAGAAGAAG...GTCCTGAGGCCTACAAGCGGCTCCTATCCAGCTTCTACTGCAAGGGGACACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp TTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGCTGGGCTCAGGCTGCTaGCTTGAGATAAACCCAGTT +
Preference number: 2 (lower is better)
Translates to: LDFPWATWVLRAPLWGSGLGSGC*LEINPV
Trigger: AACTGGGTTTATCTCAAGGCAGCAGCCTGAGCCCAG...CCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR-3UTR GCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCCGTGGGCAACCTGGGTaGTTCGAGCTCCGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLRGQPG*FELRSG
Trigger: CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACG...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR-3UTR CCA 90 bp CGTGTGTCCCCTTGCAGTAGAAGCTGGATAGGAGCCGCTTGTAGGCCTCAGGACATGGCCCGGGTGTCCTaGGTAGCAGGCACTAGTTCA +
Preference number: 2 (lower is better)
Translates to: RVSPCSRSWIGAACRPQDMARVS*VAGTSS
Trigger: TGAACTAGTGCCTGCTACCCAGGACACCCGGGCCAT...GTCCTGAGGCCTACAAGCGGCTCCTATCCAGCTTCTACTGCAAGGGGACACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR CCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCGCGGGCAGTGCAGCATaGTGCCCCTGTAGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLAGSAA*CPCRPL
Trigger: CAGAGGCCTACAGGGGCACCATGCTGCACTGCCCGC...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp TTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGACCCAGTTTTCCCACTaGCTTCTTCTTCACTTGTGC +
Preference number: 2 (lower is better)
Translates to: LDFPWATWVLRAPLWGSGTQFSH*LLLHLC
Trigger: GCACAAGTGAAGAAGAAGGCAGTGGGAAAACTGGGT...CCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR-3UTR GCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCGCATCATCTGGTCCATaGGCCGCTCCTCCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLASSGP*AAPPWP
Trigger: AGGCCAAGGAGGAGCGGCGCATGGACCAGATGATGC...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCCTGGCTGGGAAGTGGTaGTGGGTCAGCAGCATCTGC +
Preference number: 2 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLLAGKW*WVSSIC
Trigger: GCAGATGCTGCTGACCCAGCACCACTTCCCAGCCAG...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp GTCGACTCCACAGTGTACACAACACCATGGGCTGGCCTACAGCTTGGTGTTGAGAAGAAGTCCCTGGGGTaGTGGCTGACAGGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: VDSTVYTTPWAGLQLGVEKKSLG*WLTGFS
Trigger: GCTGAAGCCTGTCAGCCAGCACCCCAGGGACTTCTT...CTCAACACCAAGCTGTAGGCCAGCCCATGGTGTTGTGTACACTGTGGAGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR TCA 90 bp GTCGACTCCACAGTGTACACAACACCATGGGCTGGCCTACAGCTTGGTGTTGAGCTTTTTGGCCAGTGGTaGCATGATGCCGTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: VDSTVYTTPWAGLQLGVELFGQW*HDAVCP
Trigger: GGGACACACGGCATCATGTCACCACTGGCCAAAAAG...CTCAACACCAAGCTGTAGGCCAGCCCATGGTGTTGTGTACACTGTGGAGTCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp ATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGATGGGGCAGTGGGAGCTaGCCATCCTCTCCCAGCGCC +
Preference number: 2 (lower is better)
Translates to: IHTGVFLLDFPWATWVLRWGSGS*PSSPSA
Trigger: GGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCCA...TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
3UTR-3UTR CCA 90 bp GCCGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGACTGGTGTCTTTTTATTaGATTTTCCGTGGGCAACCT +
Preference number: 2 (lower is better)
Translates to: AGAWSSQSALWGSGDSLGLVSFY*IFRGQP
Trigger: AGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG...TCCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR GCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGCTCCTGGGCTCAGGCTaGTGCCTTGAGATAAACCCA +
Preference number: 2 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWLLGSG*CLEINP
Trigger: TGGGTTTATCTCAAGGCAGCAGCCTGAGCCCAGGAG...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR-3UTR CCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCGCTGGGAAGTGGTGCTaGGTCAGCAGCATCTGCTTT +
Preference number: 2 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLAGKWC*VSSICF
Trigger: AAAGCAGATGCTGCTGACCCAGCACCACTTCCCAGC...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR CCA 90 bp AGGATGCCCTTTCTGGAGCCACCTTTATGGAACGCAGAAGGGCGGTTAGCGTCTCCTTGCAGTAGAAGCTaGATAGGAGCCGCTTGTAGG +
Preference number: 2 (lower is better)
Translates to: RMPFLEPPLWNAEGRLASPCSRS*IGAACR
Trigger: CCTACAAGCGGCTCCTATCCAGCTTCTACTGCAAGG...AGACGCTAACCGCCCTTCTGCGTTCCATAAAGGTGGCTCCAGAAAGGGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR CCA 90 bp GTAGAGGATGCCCTTTCTGGAGCCACCTTTATGGAACGCAGAAGGGCGGTTAGCTTATTGGATTTTCCGTaGGCAACCTGGGTGCTTCGA +
Preference number: 2 (lower is better)
Translates to: VEDALSGATFMERRRAVSLLDFP*ATWVLR
Trigger: TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAA...GCTAACCGCCCTTCTGCGTTCCATAAAGGTGGCTCCAGAAAGGGCATCCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR GCA 72 bp GGCGCGTGCACGTGGCCGCGCTGGTGCTGCCTGGGCTaGCCCCCAGCTCGTCGTACACGTTCTTCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: GACTWPRWCCLG*PPARRTRSSRG
Trigger: GCCTCTGGAAGAACGTGTACGACGAGCTGGGGGGCAGCCCAGGCAGCACCAGCGCGGCCACGTGCACGCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CCA 72 bp CCAGGCTGCCCAGCCAGGGGCATGGCCCGGGTGTCCTaGGTAGCAGGCACTAGTTCAGAGCCCCCTGGCAGC +
Preference number: 3 (lower is better)
Translates to: PGCPARGMARVS*VAGTSSEPPGS
Trigger: GCTGCCAGGGGGCTCTGAACTAGTGCCTGCTACCCAGGACACCCGGGCCATGCCCCTGGCTGGGCAGCCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR GCA 72 bp CTCTGGGAGGTGAACAGCTGGGGACGCCTGGGGCTCTaGCCCATGGCGGCAGCCCTCCTCCTGGCACTGCAA +
Preference number: 3 (lower is better)
Translates to: LWEVNSWGRLGL*PMAAALLLALQ
Trigger: TTGCAGTGCCAGGAGGAGGGCTGCCGCCATGGGGCAGAGCCCCAGGCGTCCCCAGCTGTTCACCTCCCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR GCA 72 bp GGCTGGGCCCAGAAGGCAGGAGACCAGGCCGGACCCTaGAGGTTTGGCCCCACACTTCTTGGCATCCGCCTC +
Preference number: 3 (lower is better)
Translates to: GWAQKAGDQAGP*RFGPTLLGIRL
Trigger: GAGGCGGATGCCAAGAAGTGTGGGGCCAAACCTGCAGGGTCCGGCCTGGTCTCCTGCCTTCTGGGCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CCA 72 bp TTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTaGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCC +
Preference number: 3 (lower is better)
Translates to: FPWATWVLRAPL*GSGSCPSSPSA
Trigger: GGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR CCA 72 bp CGGCTTGTCATCCTCCCCCTTCAGGTGCCGCACGTATaGCAGGACCAGCCTCTCGTAGTGGCGGCGCGTGCA +
Preference number: 3 (lower is better)
Translates to: RLVILPLQVPHV*QDQPLVVAARA
Trigger: TGCACGCGCCGCCACTACGAGAGGCTGGTCCTGCCATACGTGCGGCACCTGAAGGGGGAGGATGACAAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR CAA 90 bp GGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCATCCTTACTGTTTCCTGGGCTaGGAGGTGGGCAGCGGCTTG +
Preference number: 3 (lower is better)
Translates to: GQPGCFELRSGAVGAAHPYCFLG*EVGSGL
Trigger: CAAGCCGCTGCCCACCTCCAAGCCCAGGAAACAGTA...AGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CCA 72 bp GCAAAGTCTGTGGCGGAGGGCACTGTCGAAGGACGTTaGGGGGAAGTGCATCAGGCCAGCGGCCATGGGCGA +
Preference number: 3 (lower is better)
Translates to: AKSVAEGTVEGR*GEVHQASGHGR
Trigger: TCGCCCATGGCCGCTGGCCTGATGCACTTCCCCCCAACGTCCTTCGACAGTGCCCTCCGCCACAGACTTTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CCA 72 bp TTCCTGGCATCATCTGGTCCATGCGCCGCTCCTCCTTaGCCTTCTTCGGCCTCTCGGTGGCCCCATCATCCC +
Preference number: 3 (lower is better)
Translates to: FLASSGPCAAPP*PSSASRWPHHP
Trigger: GGGATGATGGGGCCACCGAGAGGCCGAAGAAGGCCAAGGAGGAGCGGCGCATGGACCAGATGATGCCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CCA 72 bp GGGTCAGCCGGTGCCTGGAGTTCTCAGTCAGCCCTTTaGGGCTCTGGGGACTCTCTGGGAGGTGAACAGCTG +
Preference number: 3 (lower is better)
Translates to: GSAGAWSSQSAL*GSGDSLGGEQL
Trigger: CAGCTGTTCACCTCCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCGGCTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CCA 72 bp CTGGGACCTTGGCCATGGGGGACACCCAGCAGGCTTTaGGCTTGGGGTAGAGGATGCCCTTTCTGGAGCCAC +
Preference number: 3 (lower is better)
Translates to: LGPWPWGTPSRL*AWGRGCPFWSH
Trigger: GTGGCTCCAGAAAGGGCATCCTCTACCCCAAGCCCAAAGCCTGCTGGGTGTCCCCCATGGCCAAGGTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR CAA 90 bp GAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGGAGGTGGGCAGCGGCTaGTCATCCTCCCCCTTCAGG +
Preference number: 3 (lower is better)
Translates to: ELPILSQRLITTGSSAPGEVGSG*SSSPFR
Trigger: CCTGAAGGGGGAGGATGACAAGCCGCTGCCCACCTC...CCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR TCA 72 bp TGCATAGGTTGTGACTGGTGGTGCGTGCCAGGCAGATaGGGCCGGGCAAAGTCTGTGGCGGAGGGCACTGTC +
Preference number: 3 (lower is better)
Translates to: CIGCDWWCVPGR*GRAKSVAEGTV
Trigger: GACAGTGCCCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACCAGTCACAACCTATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CCA 72 bp GGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTaGGTCCTCTGCTCCTGGGCTCAGGCTGCTGCCTTG +
Preference number: 3 (lower is better)
Translates to: GAAHPLPAPYNN*VLCSWAQAAAL
Trigger: CAAGGCAGCAGCCTGAGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR CCA 72 bp CCTTGGCCATGGGGGACACCCAGCAGGCTTTGGGCTTaGGGTAGAGGATGCCCTTTCTGGAGCCACCTTTAT +
Preference number: 3 (lower is better)
Translates to: PWPWGTPSRLWA*GRGCPFWSHLY
Trigger: ATAAAGGTGGCTCCAGAAAGGGCATCCTCTACCCCAAGCCCAAAGCCTGCTGGGTGTCCCCCATGGCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR CAA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGATGCGCCGCTCCTCCTaGGCCTTCTTCGGCCTCTCG +
Preference number: 3 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGMRRSS*AFFGLS
Trigger: CGAGAGGCCGAAGAAGGCCAAGGAGGAGCGGCGCAT...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR GCA 72 bp CTCCTGGCTGGGAAGTGGTGCTGGGTCAGCAGCATCTaGTTTGGTCTTTCCTGGCATCATCTGGTCCATGCG +
Preference number: 3 (lower is better)
Translates to: LLAGKWCWVSSI*FGLSWHHLVHA
Trigger: CGCATGGACCAGATGATGCCAGGAAAGACCAAAGCAGATGCTGCTGACCCAGCACCACTTCCCAGCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR GCA 72 bp GGGACACCCAGCAGGCTTTGGGCTTGGGGTAGAGGATaGCCTTTCTGGAGCCACCTTTATGGAACGCAGAAG +
Preference number: 3 (lower is better)
Translates to: GTPSRLWAWGRG*PFWSHLYGTQK
Trigger: CTTCTGCGTTCCATAAAGGTGGCTCCAGAAAGGGCATCCTCTACCCCAAGCCCAAAGCCTGCTGGGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR GCA 72 bp CTACAGCTTGGTGTTGAGGTGGAAGAAGTGGGGCGCTaGATAGGTTGTGACTGGTGGTGCGTGCCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: LQLGVEVEEVGR*IGCDWWCVPGR
Trigger: TCTGCCTGGCACGCACCACCAGTCACAACCTATGCAGCGCCCCACTTCTTCCACCTCAACACCAAGCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR CAA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGCCTTCTTCTTCACTaGTGCCAGGCTGCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLCLLLH*CQAAQP
Trigger: TGGCTGGGCAGCCTGGCACAAGTGAAGAAGAAGGCA...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
3UTR-3UTR CAA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTCAGCAGCATCTGCTTaGGTCTTTCCTGGCATCATC +
Preference number: 3 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLSAASA*VFPGII
Trigger: GATGATGCCAGGAAAGACCAAAGCAGATGCTGCTGA...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR-3UTR CAA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGTTCTCCTTAGCCATCTaGTACTGTTTCCTGGGCTTG +
Preference number: 3 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFEFSLAI*YCFLGL
Trigger: CAAGCCCAGGAAACAGTACAAGATGGCTAAGGAGAA...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR GCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCTGCCGGGCAGGGGCCTaGCTGCGCCTCCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPCRAGA*LRLLSE
Trigger: CTCAGAGAGGAGGCGCAGGCAGGCCCCTGCCCGGCA...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCATCCTCCTGCGCCTCCTCTCTaGGGCTGCCACCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GQPGCFELRSGAVGAAHPPAPPL*GCHLGP
Trigger: AGGCCCCAGGTGGCAGCCTCAGAGAGGAGGCGCAGG...AGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCCCCTGGGGTGCTGGCTaGCAGGCTTCAGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPPWGAG*QASAPR
Trigger: CCGAGGTGCTGAAGCCTGTCAGCCAGCACCCCAGGG...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCGGGCAGGGGCCTGCCTaGGCCTCCTCTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FRGQPGCFELRSGAVGAAGQGPA*ASSLRL
Trigger: CAGCCTCAGAGAGGAGGCGCAGGCAGGCCCCTGCCC...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCATCCTGGCCCGGGGTGCCAGTaGAGTTCAGCGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GQPGCFELRSGAVGAAHPGPGCQ*SSAGSA
Trigger: TGCACTGCCCGCTGAACTTCACTGGCACCCCGGGCC...AGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGAGGCGTAGTGGCGGCGCGTaGACGTGGCCGCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RCLEFSVSPLGLWGLSGRRSGGA*TWPRWC
Trigger: GCACCAGCGCGGCCACGTGCACGCGCCGCCACTACG...CCTCCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR GCA 90 bp GGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCATCCTCCAGGCTGCGCTTGCTaGCCAGGCCTGGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: GQPGCFELRSGAVGAAHPPGCAC*PGLGYW
Trigger: CCAGTAGCCCAGGCCTGGGCAGCAAGCGCAGCCTGG...AGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp AGCGGCTTGTCATCCTCCCCCTTCAGGTGCCGCACGTATGGCAGGACCAGCCTCTGCACGTGGCCGCGCTaGTGCTGCCTGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SGLSSSPFRCRTYGRTSLCTWPR*CCLGCP
Trigger: GGGGCAGCCCAGGCAGCACCAGCGCGGCCACGTGCA...GAGGCTGGTCCTGCCATACGTGCGGCACCTGAAGGGGGAGGATGACAAGCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCTGGGAGGTGAACAGCTaGGGACGCCTGGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPWEVNS*GRLGLC
Trigger: GCAGAGCCCCAGGCGTCCCCAGCTGTTCACCTCCCA...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGGAAGTGCATCAGGCCAGCGGCCATGGGCGAGGGGCCTGCGGTGGCCAGGAAGCTGGGACCTTGGCCATaGGGGACACCCAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GKCIRPAAMGEGPAVARKLGPWP*GTPSRL
Trigger: AAGCCTGCTGGGTGTCCCCCATGGCCAAGGTCCCAG...CTTCCTGGCCACCGCAGGCCCCTCGCCCATGGCCGCTGGCCTGATGCACTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp GGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCATCCTCGTGGGGCTCTCGGCTaGGACCTTGGCCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: GQPGCFELRSGAVGAAHPRGALG*DLGHGG
Trigger: TCCCCCATGGCCAAGGTCCCAGCCGAGAGCCCCACG...AGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCGCGGGCAGTGCAGCATaGTGCCCCTGTAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPAGSAA*CPCRPL
Trigger: CAGAGGCCTACAGGGGCACCATGCTGCACTGCCCGC...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCACGCCACCGTGCGTGTaGGCTCCCACCAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FRGQPGCFELRSGAVGAATPPCV*APTRGA
Trigger: GGCTCCTCTGGTGGGAGCCCACACGCACGGTGGCGT...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR TCA 90 bp GGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCCTGCGCCTCCTCTCTaGGGCTGCCACCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GFSVGNLGASSSALGQWEPAPPL*GCHLGP
Trigger: AGGCCCCAGGTGGCAGCCTCAGAGAGGAGGCGCAGG...CTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp AGCGGCTTGTCATCCTCCCCCTTCAGGTGCCGCACGTATGGCAGGACCAGCCTCTGCCGGGCAGGGGCCTaGCTGCGCCTCCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SGLSSSPFRCRTYGRTSLCRAGA*LRLLSE
Trigger: CTCAGAGAGGAGGCGCAGGCAGGCCCCTGCCCGGCA...GAGGCTGGTCCTGCCATACGTGCGGCACCTGAAGGGGGAGGATGACAAGCCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR GCA 90 bp GGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCATCCTCGTGGGCAACCTGGGTaGTTCGAGCTCCGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GQPGCFELRSGAVGAAHPRGQPG*FELRSG
Trigger: CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACG...AGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTTGCACGTGGCCGCGCTaGTGCTGCCTGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCCTWPR*CCLGCP
Trigger: GGGGCAGCCCAGGCAGCACCAGCGCGGCCACGTGCA...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GTGACTGGTGGTGCGTGCCAGGCAGATGAGGCCGGGCAAAGTCTGTGGCGGAGGCGTGGGGCTCTCGGCTaGGACCTTGGCCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: VTGGACQADEAGQSLWRRRGALG*DLGHGG
Trigger: TCCCCCATGGCCAAGGTCCCAGCCGAGAGCCCCACG...CCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACCAGTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR TCA 90 bp GGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCATCCTGCGCTGCATAGGTTGTaGCTGGTGGTGCGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GQPGCFELRSGAVGAAHPALHRL*LVVRAR
Trigger: CCTGGCACGCACCACCAGTCACAACCTATGCAGCGC...AGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGAGCTCTGCTGCGGGGTaGAGCCCTCGAGCCCCGACC +
Preference number: 4 (lower is better)
Translates to: ALVQSPLAAVPACCRPLSSSAAG*SPRAPT
Trigger: GGTCGGGGCTCGAGGGCTTCACCCCGCAGCAGAGCT...CGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR GCA 90 bp GGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCATCCTCCCTCCTCCTGGCACTaGAAGGCCTCCACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GQPGCFELRSGAVGAAHPPSSWH*KASTLL
Trigger: GAGCAAGGTGGAGGCCTTGCAGTGCCAGGAGGAGGG...AGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGTGGGGCAGTGGGAGCTaGCCATCCTCTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GFSVGNLGASSSALGQWEWGSGS*PSSPSA
Trigger: GGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCCA...CTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCGGGGCACCCTCTCGATaGGCGTGTGTCGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FRGQPGCFELRSGAVGAAGAPSR*ACVAPS
Trigger: TGAAGGAGCGACACACGCCCATCGAGAGGGTGCCCC...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CCA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCACAGCTGGGGACGCCTaGGGCTCTGCCCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLTAGDA*GSAPWR
Trigger: CCGCCATGGGGCAGAGCCCCAGGCGTCCCCAGCTGT...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGGAAGTGCATCAGGCCAGCGGCCATGGGCGAGGGGCCTGCGGTGGCCAGGAAGTCTCAGTCAGCCCTTTaGGGCTCTGGGGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: GKCIRPAAMGEGPAVARKSQSAL*GSGDSL
Trigger: CAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGA...CTTCCTGGCCACCGCAGGCCCCTCGCCCATGGCCGCTGGCCTGATGCACTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCGGGTCAGCCGGTGCCTaGAGTTCTCAGTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPGSAGA*SSQSAL
Trigger: AAGGGCTGACTGAGAACTCCAGGCACCGGCTGACCC...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCGCTTCAGCACCTCGGTaGGGTGGGTGTAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPASAPR*GGCRSS
Trigger: GCTGCTTCTACACCCACCCCACCGAGGTGCTGAAGC...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TGCCACCTGGGGCCTGCAATCCCTCCTGAGGGGTCAGCCGGTGCCTGGAGTTCTTCTCGGCTGGGACCTTaGCCATGGGGGACACCCAGC +
Preference number: 4 (lower is better)
Translates to: CHLGPAIPPEGSAGAWSSSRLGP*PWGTPS
Trigger: GCTGGGTGTCCCCCATGGCCAAGGTCCCAGCCGAGA...AGAACTCCAGGCACCGGCTGACCCCTCAGGAGGGATTGCAGGCCCCAGGTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR TCA 90 bp GGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGGGACTCTCTGGGAGGTaGACAGCTGGGGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: GFSVGNLGASSSALGQWEGLSGR*TAGDAW
Trigger: CCAGGCGTCCCCAGCTGTTCACCTCCCAGAGAGTCC...CTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp TTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGGCCTGCAATCCCTCCTaGGGGGTCAGCCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LDFPWATWVLRAPLWGSGACNPS*GVSRCL
Trigger: CAGGCACCGGCTGACCCCTCAGGAGGGATTGCAGGC...CCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGCCCTGGGGTGCTGGCTaGCAGGCTTCAGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: ALVQSPLAAVPACCRPLSPWGAG*QASAPR
Trigger: CCGAGGTGCTGAAGCCTGTCAGCCAGCACCCCAGGG...CGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp TTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGGGCCCGGGGTGCCAGTaGAGTTCAGCGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LDFPWATWVLRAPLWGSGGPGCQ*SSAGSA
Trigger: TGCACTGCCCGCTGAACTTCACTGGCACCCCGGGCC...CCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGTGGTGCTGCCTGGGCTaGCCCCCAGCTCGTCGTACA +
Preference number: 4 (lower is better)
Translates to: GFSVGNLGASSSALGQWEWCCLG*PPARRT
Trigger: TGTACGACGAGCTGGGGGGCAGCCCAGGCAGCACCA...CTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCTGGCTGGGAAGTGGTaGTGGGTCAGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: FRGQPGCFELRSGAVGAALAGKW*WVSSIC
Trigger: GCAGATGCTGCTGACCCAGCACCACTTCCCAGCCAG...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGGGACGCCTGGGGCTCTaGCCCATGGCGGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPVVGPCRLHSVHNTMGWGRLGL*PMAAAL
Trigger: GAGGGCTGCCGCCATGGGGCAGAGCCCCAGGCGTCC...CCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGGGGCAGGGGCCTGCCTaGGCCTCCTCTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ELPILSQRLITTGSSAPGGQGPA*ASSLRL
Trigger: CAGCCTCAGAGAGGAGGCGCAGGCAGGCCCCTGCCC...CCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTTGGGGCAGTGGGAGCTaGCCATCCTCTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCWGSGS*PSSPSA
Trigger: GGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCCA...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCATCCTCCCTTTGACAGGGGCTaGGGGCTCTGGGATGTCCTA +
Preference number: 4 (lower is better)
Translates to: GQPGCFELRSGAVGAAHPPFDRG*GLWDVL
Trigger: TAGGACATCCCAGAGCCCGCAGCCCCTGTCAAAGGG...AGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCGGGCGTCACCCTCCGTaGACTGCTTCCTGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: FRGQPGCFELRSGAVGAAGRHPP*TASCSL
Trigger: AAGGGAACAGGAAGCAGTCCACGGAGGGTGACGCCC...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCAGGTGCCGCACGTATaGCAGGACCAGCCTCTCGTA +
Preference number: 4 (lower is better)
Translates to: FRGQPGCFELRSGAVGAAQVPHV*QDQPLV
Trigger: TACGAGAGGCTGGTCCTGCCATACGTGCGGCACCTG...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCATCCTTCCTGGGCTTGGAGGTaGGCAGCGGCTTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: GQPGCFELRSGAVGAAHPSWAWR*AAACHP
Trigger: AGGATGACAAGCCGCTGCCCACCTCCAAGCCCAGGA...AGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAAGGGGAGTGCAGCCTaGCCCTTCAAGGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LDFPWATWVLRAPLWGSGKGSAA*PFKGPG
Trigger: CCCGGGCCCCTTGAAGGGCCAGGCTGCACTCCCCTT...CCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTTCGAGCTCCGCTCTaGGGCAGTGGGAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GFSVGNLGASSSALGQWELRAPL*GSGSCP
Trigger: TGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAG...CTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GTGTCCTGGGTAGCAGGCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGGGACTCTCTGGGAGGTaGACAGCTGGGGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: VSWVAGTSSEPPGSSTCLGLSGR*TAGDAW
Trigger: CCAGGCGTCCCCAGCTGTTCACCTCCCAGAGAGTCC...CAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGCCTGCTACCCAGGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTGCCTGCAATCCCTCCTaGGGGGTCAGCCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: AAHPLPAPYNNWVLCSWAACNPS*GVSRCL
Trigger: CAGGCACCGGCTGACCCCTCAGGAGGGATTGCAGGC...AGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp AGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGCCTACAGCTTGCCTGCGCCTCCTCTCTaGGGCTGCCACCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RPLSTPQCTQHHGLAYSLPAPPL*GCHLGP
Trigger: AGGCCCCAGGTGGCAGCCTCAGAGAGGAGGCGCAGG...CAAGCTGTAGGCCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR TCA 90 bp CGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGAGGTGTAGAAGCAGCCCTTaGAGATGGGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RCLEFSVSPLGLWGLSGRCRSSP*RWGLPG
Trigger: GCCCGGCAGCCCCCATCTTCAAGGGCTGCTTCTACA...CCTCCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR TCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCGGTGGTGACGGACAGTaGGAGCTCCTCAGATGGTTT +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPGGDGQ*ELLRWF
Trigger: AAACCATCTGAGGAGCTCTCACTGTCCGTCACCACC...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR GCA 90 bp GCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGCTGACCAGGAAGGCCTaGTCCTCCTCCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ALVQSPLAAVPACCRPLSLTRKA*SSSRSC
Trigger: GCAGGAGCGGGAGGAGGAGCAGGCCTTCCTGGTCAG...CGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR GCA 90 bp TGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACCGTAGTGGCGGCGCGTaGACGTGGCCGCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: WQQYLPVVGPCRLHSVHNRSGGA*TWPRWC
Trigger: GCACCAGCGCGGCCACGTGCACGCGCCGCCACTACG...GTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CGTGTGTCCCCTTGCAGTAGAAGCTGGATAGGAGCCGCTTGTAGGCCTCAGGACGGGCAGGGGCCTGCCTaGGCCTCCTCTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RVSPCSRSWIGAACRPQDGQGPA*ASSLRL
Trigger: CAGCCTCAGAGAGGAGGCGCAGGCAGGCCCCTGCCC...GTCCTGAGGCCTACAAGCGGCTCCTATCCAGCTTCTACTGCAAGGGGACACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR GCA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCAAGAAGTCCCTGGGGTaGTGGCTGACAGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: FRGQPGCFELRSGAVGAAKKSLG*WLTGFS
Trigger: GCTGAAGCCTGTCAGCCAGCACCCCAGGGACTTCTT...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCCAGGCTGCGCTTGCTaGCCAGGCCTGGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: ELPILSQRLITTGSSAPGPGCAC*PGLGYW
Trigger: CCAGTAGCCCAGGCCTGGGCAGCAAGCGCAGCCTGG...CCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGAGGGACCAGGCCGGACCCTaGAGGTTTGGCCCCACACTT +
Preference number: 4 (lower is better)
Translates to: RCLEFSVSPLGLWGLSGRDQAGP*RFGPTL
Trigger: AAGTGTGGGGCCAAACCTGCAGGGTCCGGCCTGGTC...CCTCCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR GCA 90 bp GTGTCCTGGGTAGCAGGCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGGGCAGTGCAGCATGGTaGCCCTGTAGGCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VSWVAGTSSEPPGSSTCLGSAAW*PCRPLG
Trigger: CCCCAGAGGCCTACAGGGGCACCATGCTGCACTGCC...CAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGCCTGCTACCCAGGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCCTCCTGGGCTCAGGCTaGTGCCTTGAGATAAACCCA +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPLLGSG*CLEINP
Trigger: TGGGTTTATCTCAAGGCAGCAGCCTGAGCCCAGGAG...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCTCTTGTACTGTTTCCTaGGCTTGGAGGTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPSCTVS*AWRWAA
Trigger: CGCTGCCCACCTCCAAGCCCAGGAAACAGTACAAGA...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GTGTCCTGGGTAGCAGGCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGTGCGCCGCTCCTCCTTaGCCTTCTTCGGCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: VSWVAGTSSEPPGSSTCLCAAPP*PSSASR
Trigger: CCGAGAGGCCGAAGAAGGCCAAGGAGGAGCGGCGCA...CAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGCCTGCTACCCAGGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTTGGGAGGTGAACAGCTaGGGACGCCTGGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCWEVNS*GRLGLC
Trigger: GCAGAGCCCCAGGCGTCCCCAGCTGTTCACCTCCCA...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGAAGGGGAGTGCAGCCTaGCCCTTCAAGGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GAAHPLPAPYNNWVLCSWKGSAA*PFKGPG
Trigger: CCCGGGCCCCTTGAAGGGCCAGGCTGCACTCCCCTT...CCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGAGGGCCGGGCAAAGTCTGTaGCGGAGGGCACTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: RCLEFSVSPLGLWGLSGRAGQSL*RRALSK
Trigger: CTTCGACAGTGCCCTCCGCCACAGACTTTGCCCGGC...CCTCCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCTGCATAGGTTGTGACTaGTGGTGCGTGCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPCIGCD*WCVPGR
Trigger: TCTGCCTGGCACGCACCACCAGTCACAACCTATGCA...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCAGCTTGGTGTTGAGGTaGAAGAAGTGGGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPSLVLR*KKWGAA
Trigger: TGCAGCGCCCCACTTCTTCCACCTCAACACCAAGCT...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACCGCCTTGGGACCCCCTaGGCCCTCGGGGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WQQYLPVVGPCRLHSVHNRLGTP*ALGGPA
Trigger: TGCAGGACCCCCGAGGGCCCAGGGGGTCCCAAGGCG...GTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTCCAGAGGAGCCCGGGTaGGGCAAGAGGCACCTGTTG +
Preference number: 4 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCPEEPG*GKRHLL
Trigger: CAACAGGTGCCTCTTGCCCCACCCGGGCTCCTCTGG...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR TCA 90 bp CTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTCGGACTCTCTGGGAGGTaGACAGCTGGGGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPILSQRLITTGSSAPGLGLSGR*TAGDAW
Trigger: CCAGGCGTCCCCAGCTGTTCACCTCCCAGAGAGTCC...GAGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCGTGCCAGGCAGATaGGGCCGGGCAAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLCVPGR*GRAKSV
Trigger: CACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCA...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCGCGCTGCATAGGTTGTaGCTGGTGGTGCGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLALHRL*LVVRAR
Trigger: CCTGGCACGCACCACCAGTCACAACCTATGCAGCGC...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCGCCTGGATTGGGCTCTaGGCTCTGCTGCGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLAWIGL*ALLRGE
Trigger: TTCACCCCGCAGCAGAGCTCAGAGCCCAATCCAGGC...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR GCA 90 bp TTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGGCAAGGCCTCCACCTTaGTCACCTGGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LDFPWATWVLRAPLWGSGARPPP*SPGPGA
Trigger: AGCTCCTGGCCCAGGTGAGCAAGGTGGAGGCCTTGC...CCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTGGCAGTGCAGCATGGTaGCCCTGTAGGCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AAHPLPAPYNNWVLCSWAGSAAW*PCRPLG
Trigger: CCCCAGAGGCCTACAGGGGCACCATGCTGCACTGCC...AGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGTGACTGGTGGTGCGTaGCAGGCAGATGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GAAHPLPAPYNNWVLCSWVTGGA*QADEAG
Trigger: CCCGGCCTCATCTGCCTGGCACGCACCACCAGTCAC...CCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCCTGGGCTCAGGCTGCTaGCTTGAGATAAACCCAGTT +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPLGSGC*LEINPV
Trigger: AACTGGGTTTATCTCAAGGCAGCAGCCTGAGCCCAG...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTAAGCCGGGCATCGCCTaGAAGCTCGTAGCCCACGCT +
Preference number: 4 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCKPGIA*KLVAHA
Trigger: AGCGTGGGCTACGAGCTTGCAGGCGATGCCCGGCTT...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp GTGTCCTGGGTAGCAGGCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGGGGGCACCCTCTCGATaGGCGTGTGTCGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VSWVAGTSSEPPGSSTCLGAPSR*ACVAPS
Trigger: TGAAGGAGCGACACACGCCCATCGAGAGGGTGCCCC...CAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGCCTGCTACCCAGGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CCA 90 bp GGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGGGGTCAGCCGGTGCCTaGAGTTCTCAGTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GFSVGNLGASSSALGQWEGSAGA*SSQSAL
Trigger: AAGGGCTGACTGAGAACTCCAGGCACCGGCTGACCC...CTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGAGGGCTTCAGCACCTCGGTaGGGTGGGTGTAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RCLEFSVSPLGLWGLSGRASAPR*GGCRSS
Trigger: GCTGCTTCTACACCCACCCCACCGAGGTGCTGAAGC...CCTCCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp CGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGAGGAAGTCCCTGGGGTGCTaGCTGACAGGCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: RCLEFSVSPLGLWGLSGRKSLGC*LTGFST
Trigger: GGTGCTGAAGCCTGTCAGCCAGCACCCCAGGGACTT...CCTCCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCGCCGGGCAAAGTCTGTaGCGGAGGGCACTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLAGQSL*RRALSK
Trigger: CTTCGACAGTGCCCTCCGCCACAGACTTTGCCCGGC...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCGCGCCTTATAACAACTaGGTCCTCTGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FRGQPGCFELRSGAVGAAAPYNN*VLCSWA
Trigger: AGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGC...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp CTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAAGCCTGCAATCCCTCCTaGGGGGTCAGCCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LAAVPACCRPLSTPQCTQACNPS*GVSRCL
Trigger: CAGGCACCGGCTGACCCCTCAGGAGGGATTGCAGGC...TTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGGCGCTGCATAGGTTGTaGCTGGTGGTGCGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ELPILSQRLITTGSSAPGALHRL*LVVRAR
Trigger: CCTGGCACGCACCACCAGTCACAACCTATGCAGCGC...CCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp AGCCGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGCCTACAGCTTGGTGTTaGGGTGGAAGAAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: SRCLEFSVSPLGLWGLSGPTAWC*GGRSGA
Trigger: CGCCCCACTTCTTCCACCTCAACACCAAGCTGTAGG...CCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR GCA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCGCATCATCTGGTCCATaGGCCGCTCCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLASSGP*AAPPWP
Trigger: AGGCCAAGGAGGAGCGGCGCATGGACCAGATGATGC...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GCTTGTCATCCTCCCCCTTCAGGTGCCGCACGTATGGCAGGACCAGCCTCTCGTCTGGCTGGGAAGTGGTaGTGGGTCAGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: ACHPPPSGAARMAGPASRLAGKW*WVSSIC
Trigger: GCAGATGCTGCTGACCCAGCACCACTTCCCAGCCAG...ACGAGAGGCTGGTCCTGCCATACGTGCGGCACCTGAAGGGGGAGGATGACAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR GCA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTCCAGAGGCCAGGCCCTaGTGTTCTGTGCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCPEARP*CSVLFL
Trigger: CAGGAACAGCACAGAACAGCAGGGCCTGGCCTCTGG...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCCCAGAGGCCAGGCCCTaGTGTTCTGTGCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLPEARP*CSVLFL
Trigger: CAGGAACAGCACAGAACAGCAGGGCCTGGCCTCTGG...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCAAGGCCTCCACCTTaGTCACCTGGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GAAHPLPAPYNNWVLCSWARPPP*SPGPGA
Trigger: AGCTCCTGGCCCAGGTGAGCAAGGTGGAGGCCTTGC...CCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGACGCCTGGGGCTCTaGCCCATGGCGGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWGRLGL*PMAAAL
Trigger: GAGGGCTGCCGCCATGGGGCAGAGCCCCAGGCGTCC...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GCCGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGAAAGAAGTCCCTGGGGTaGTGGCTGACAGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: AGAWSSQSALWGSGDSLGKKSLG*WLTGFS
Trigger: GCTGAAGCCTGTCAGCCAGCACCCCAGGGACTTCTT...TCCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR GCA 90 bp GGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGACCAGGCCGGACCCTaGAGGTTTGGCCCCACACTT +
Preference number: 4 (lower is better)
Translates to: GAAHPLPAPYNNWVLCSWDQAGP*RFGPTL
Trigger: AAGTGTGGGGCCAAACCTGCAGGGTCCGGCCTGGTC...CCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGCGTGGGCAACCTGGGTaGTTCGAGCTCCGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPVVGPCRLHSVHNTMGWRGQPG*FELRSG
Trigger: CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACG...CCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATCCTCTCCTGTGGGGCTaGGGCGGGTGGGCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHPLLWG*GGWAER
Trigger: TCTCTCCGCCCACCCGCCGCAGCCCCACAGGAGAGG...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR GCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCGGCCCTCGGGGGTCCTaGACCGCGCAAGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLGPRGS*TAQAPP
Trigger: TGGTGGGGCTTGCGCGGTGCAGGACCCCCGAGGGCC...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp GTGTCCTGGGTAGCAGGCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGGGGCGTCACCCTCCGTaGACTGCTTCCTGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VSWVAGTSSEPPGSSTCLGRHPP*TASCSL
Trigger: AAGGGAACAGGAAGCAGTCCACGGAGGGTGACGCCC...CAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGCCTGCTACCCAGGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGGCTTGCCAGCAGGTTTaGGGGATGCAGGTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: GFSVGNLGASSSALGQWEACQQV*GMQVGL
Trigger: TAGACCCACCTGCATCCCCCAAACCTGCTGGCAAGC...CTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTGCACGTGGCCGCGCTaGTGCTGCCTGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LVSFYWIFRGQPGCFELRCTWPR*CCLGCP
Trigger: GGGGCAGCCCAGGCAGCACCAGCGCGGCCACGTGCA...GCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGTCCTGGGCTTGGAGGTaGGCAGCGGCTTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: ALVQSPLAAVPACCRPLSSWAWR*AAACHP
Trigger: AGGATGACAAGCCGCTGCCCACCTCCAAGCCCAGGA...CGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGTGCGCCGCTCCTCCTTaGCCTTCTTCGGCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LPVVGPCRLHSVHNTMGWCAAPP*PSSASR
Trigger: CCGAGAGGCCGAAGAAGGCCAAGGAGGAGCGGCGCA...CCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCCGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGATTTCCTGGCATCATCTaGTCCATGCGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGAWSSQSALWGSGDSLGFPGII*SMRRSS
Trigger: GGAGGAGCGGCGCATGGACCAGATGATGCCAGGAAA...TCCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTCCTCAGGACAGCCGCTaGCACCCACAAAGGACACAG +
Preference number: 4 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCPQDSR*HPQRTQ
Trigger: CTGTGTCCTTTGTGGGTGCCAGCGGCTGTCCTGAGG...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCTCCACCTTGCTCACCTaGGCCAGGAGCTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: FRGQPGCFELRSGAVGAASTLLT*ARSFFL
Trigger: CAAAAAGAAGCTCCTGGCCCAGGTGAGCAAGGTGGA...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATACAGCTGGGGACGCCTaGGGCTCTGCCCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHTAGDA*GSAPWR
Trigger: CCGCCATGGGGCAGAGCCCCAGGCGTCCCCAGCTGT...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTCTGGGACCTTGGCCATaGGGGACACCCAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: AAHPLPAPYNNWVLCSWALGPWP*GTPSRL
Trigger: AAGCCTGCTGGGTGTCCCCCATGGCCAAGGTCCCAG...AGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGGCGGGCAGTGCAGCATaGTGCCCCTGTAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LPVVGPCRLHSVHNTMGWAGSAA*CPCRPL
Trigger: CAGAGGCCTACAGGGGCACCATGCTGCACTGCCCGC...CCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTTTTCCGTGGGCAACCTaGGTGCTTCGAGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCFPWAT*VLRAPL
Trigger: GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAA...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCTTGTCATCCTCCCCCTTCAGGTGCCGCACGTATGGCAGGACCAGCCTCTCGTTTTCCGTGGGCAACCTaGGTGCTTCGAGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: ACHPPPSGAARMAGPASRFPWAT*VLRAPL
Trigger: GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAA...ACGAGAGGCTGGTCCTGCCATACGTGCGGCACCTGAAGGGGGAGGATGACAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp GGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCAAACAAAGGGACACTaGACCCGCAGCGCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GFSVGNLGASSSALGQWEQTKGH*TRSALG
Trigger: TCCCAAGGCGCTGCGGGTCCAGTGTCCCTTTGTTTG...CTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTCCTCCCCACGGAGTCTaGGCCACATTTGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCPPHGV*ATFGGD
Trigger: GTCACCACCAAATGTGGCCCAGACTCCGTGGGGAGG...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454558.2
3UTR CAA 72 bp TTTCCTGGCATCATCTGGTCCATGCGCCGCTCCTCCTaGGCCTTCTTCGGCCTCTCGGTGGCCCCATCATCC +
Preference number: 4 (lower is better)
Translates to: FPGIIWSMRRSS*AFFGLSVAPSS
Trigger: GGATGATGGGGCCACCGAGAGGCCGAAGAAGGCCAAGGAGGAGCGGCGCATGGACCAGATGATGCCAGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
3UTR CAA 72 bp ACCAGGCCGGACCCTGCAGGTTTGGCCCCACACTTCTaGGCATCCGCCTCCTTAAGAAAGGGAGACACGGCC +
Preference number: 4 (lower is better)
Translates to: TRPDPAGLAPHF*ASASLRKGDTA
Trigger: GGCCGTGTCTCCCTTTCTTAAGGAGGCGGATGCCAAGAAGTGTGGGGCCAAACCTGCAGGGTCCGGCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR TCA 90 bp CTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTCTGGCCAGTGGTGACATaGTGCCGTGTGTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LPILSQRLITTGSSAPGLWPVVT*CRVSPC
Trigger: GCAAGGGGACACACGGCATCATGTCACCACTGGCCA...GAGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATCCCTGGGGTGCTGGCTaGCAGGCTTCAGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHPWGAG*QASAPR
Trigger: CCGAGGTGCTGAAGCCTGTCAGCCAGCACCCCAGGG...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp AGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGCCTACAGCTTGTGCGTGCCAGGCAGATaGGGCCGGGCAAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RPLSTPQCTQHHGLAYSLCVPGR*GRAKSV
Trigger: CACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCA...CAAGCTGTAGGCCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR TCA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCTCAGAGGTGCCAGTTaGCGTCTCTCAACTGTAGAA +
Preference number: 4 (lower is better)
Translates to: FRGQPGCFELRSGAVGAALRGAS*RLSTVE
Trigger: TTCTACAGTTGAGAGACGTCAACTGGCACCTCTGAG...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR GCA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCTGGGTCAGCAGCATCTaGTTTGGTCTTTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FRGQPGCFELRSGAVGAAWVSSI*FGLSWH
Trigger: ATGCCAGGAAAGACCAAAGCAGATGCTGCTGACCCA...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTGCCGGGCAGGGGCCTaGCTGCGCCTCCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LVSFYWIFRGQPGCFELRCRAGA*LRLLSE
Trigger: CTCAGAGAGGAGGCGCAGGCAGGCCCCTGCCCGGCA...GCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp AGCCGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGGCTTGGGGTAGAGGATaGCCTTTCTGGAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: SRCLEFSVSPLGLWGLSGAWGRG*PFWSHL
Trigger: AAGGTGGCTCCAGAAAGGGCATCCTCTACCCCAAGC...CCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR GCA 90 bp TGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACCCTCTTCCTCCAGGCTaGGCTTGCTGCCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: WQQYLPVVGPCRLHSVHNPLPPG*ACCPGL
Trigger: CAGGCCTGGGCAGCAAGCGCAGCCTGGAGGAAGAGG...GTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGAGGGAAGAAGTGGGGCGCTaGATAGGTTGTGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: RCLEFSVSPLGLWGLSGREEVGR*IGCDWW
Trigger: CCACCAGTCACAACCTATGCAGCGCCCCACTTCTTC...CCTCCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR GCA 90 bp CTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAAGGCTCTGAGCTCTGCTaGGGGGTGAAGCCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: LAAVPACCRPLSTPQCTQGSELC*GVKPSS
Trigger: GCTCGAGGGCTTCACCCCGCAGCAGAGCTCAGAGCC...TTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp GTGACTGGTGGTGCGTGCCAGGCAGATGAGGCCGGGCAAAGTCTGTGGCGGAGGAGCGAGATGGGGTTCTaGATTCCGTTCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: VTGGACQADEAGQSLWRRSEMGF*IPFCLP
Trigger: TGGCAAGCAGAACGGAATCCAGAACCCCATCTCGCT...CCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACCAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp CTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTCTGCTTGAAGCCGAGATaGGGCACCCTCTCGATGGGC +
Preference number: 4 (lower is better)
Translates to: LPILSQRLITTGSSAPGLCLKPR*GTLSMG
Trigger: GCCCATCGAGAGGGTGCCCCATCTCGGCTTCAAGCA...GAGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CCA 90 bp GAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCAGGTGCCGCACGTATaGCAGGACCAGCCTCTCGTA +
Preference number: 4 (lower is better)
Translates to: ELPILSQRLITTGSSAPGQVPHV*QDQPLV
Trigger: TACGAGAGGCTGGTCCTGCCATACGTGCGGCACCTG...CCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGTCTTGTACTGTTTCCTaGGCTTGGAGGTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GFSVGNLGASSSALGQWESCTVS*AWRWAA
Trigger: CGCTGCCCACCTCCAAGCCCAGGAAACAGTACAAGA...CTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTTTTCCTGGCATCATCTaGTCCATGCGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCFPGII*SMRRSS
Trigger: GGAGGAGCGGCGCATGGACCAGATGATGCCAGGAAA...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGGGTCAGCCGGTGCCTaGAGTTCTCAGTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GAAHPLPAPYNNWVLCSWGSAGA*SSQSAL
Trigger: AAGGGCTGACTGAGAACTCCAGGCACCGGCTGACCC...CCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTTCAGCACCTCGGTaGGGTGGGTGTAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GAAHPLPAPYNNWVLCSWASAPR*GGCRSS
Trigger: GCTGCTTCTACACCCACCCCACCGAGGTGCTGAAGC...CCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GTGACTGGTGGTGCGTGCCAGGCAGATGAGGCCGGGCAAAGTCTGTGGCGGAGGCTGGAGCCACCTTTATaGAACGCAGAAGGGCGGTTA +
Preference number: 4 (lower is better)
Translates to: VTGGACQADEAGQSLWRRLEPPL*NAEGRL
Trigger: TAACCGCCCTTCTGCGTTCCATAAAGGTGGCTCCAG...CCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACCAGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp GCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACACCCAGCAGGCTTTaGGCTTGGGGTAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: ALVQSPLAAVPACCRPLSTPSRL*AWGRGC
Trigger: GCATCCTCTACCCCAAGCCCAAAGCCTGCTGGGTGT...CGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATCGTGGGGCTCTCGGCTaGGACCTTGGCCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHRGALG*DLGHGG
Trigger: TCCCCCATGGCCAAGGTCCCAGCCGAGAGCCCCACG...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACGCGGGCAGTGCAGCATaGTGCCCCTGTAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: WQQYLPVVGPCRLHSVHNAGSAA*CPCRPL
Trigger: CAGAGGCCTACAGGGGCACCATGCTGCACTGCCCGC...GTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCTTATTGGATTTTCCGTaGGCAACCTGGGTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SVGNLGASSSALGQWELPLLDFP*ATWVLR
Trigger: TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAA...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGTGGGGCTGCGGCGGGTaGGCGGAGAGACAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGWGCGG*AERQER
Trigger: CCTCTCCTGTCTCTCCGCCCACCCGCCGCAGCCCCA...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATCCTGTTGTCCTCCCCTaGGGCCCGCGGAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHPVVLP*GPRSTP
Trigger: AGGAGTGCTCCGCGGGCCCCAGGGGAGGACAACAGG...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
3UTR CAA 72 bp TTGTACTGTTTCCTGGGCTTGGAGGTGGGCAGCGGCTaGTCATCCTCCCCCTTCAGGTGCCGCACGTATGGC +
Preference number: 4 (lower is better)
Translates to: LYCFLGLEVGSG*SSSPFRCRTYG
Trigger: GCCATACGTGCGGCACCTGAAGGGGGAGGATGACAAGCCGCTGCCCACCTCCAAGCCCAGGAAACAGTACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR TCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGGCCCGGGGTGCCAGTaGAGTTCAGCGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGGPGCQ*SSAGSA
Trigger: TGCACTGCCCGCTGAACTTCACTGGCACCCCGGGCC...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATTGGTGCTGCCTGGGCTaGCCCCCAGCTCGTCGTACA +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHWCCLG*PPARRT
Trigger: TGTACGACGAGCTGGGGGGCAGCCCAGGCAGCACCA...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp ACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGTAGTGGCGGCGCGTaGACGTGGCCGCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TLVSFYWIFRGQPGCFELRSGGA*TWPRWC
Trigger: GCACCAGCGCGGCCACGTGCACGCGCCGCCACTACG...GAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACCCTCCTCCTGGCACTaGAAGGCCTCCACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LAAVPACCRPLSTPQCTQPSSWH*KASTLL
Trigger: GAGCAAGGTGGAGGCCTTGCAGTGCCAGGAGGAGGG...TTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGCAGTGCAGCATGGTaGCCCTGTAGGCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHGSAAW*PCRPLG
Trigger: CCCCAGAGGCCTACAGGGGCACCATGCTGCACTGCC...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCCTCCTGGGCTCAGGCTaGTGCCTTGAGATAAACCCA +
Preference number: 4 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLLLGSG*CLEINP
Trigger: TGGGTTTATCTCAAGGCAGCAGCCTGAGCCCAGGAG...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTGGGGCAGTGGGAGCTaGCCATCCTCTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LVSFYWIFRGQPGCFELRWGSGS*PSSPSA
Trigger: GGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCCA...GCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACTTGGGCTCTGAGCTCTaGTGCGGGGTGAAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: WQQYLPVVGPCRLHSVHNLGSEL*CGVKPS
Trigger: CGAGGGCTTCACCCCGCAGCAGAGCTCAGAGCCCAA...GTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp GGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGACTGTTTCCTGGGCTTaGAGGTGGGCAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GAAHPLPAPYNNWVLCSWTVSWA*RWAAAC
Trigger: ACAAGCCGCTGCCCACCTCCAAGCCCAGGAAACAGT...CCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GTGTCCTGGGTAGCAGGCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGGCTGGGAAGTGGTGCTaGGTCAGCAGCATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VSWVAGTSSEPPGSSTCLAGKWC*VSSICF
Trigger: AAAGCAGATGCTGCTGACCCAGCACCACTTCCCAGC...CAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGCCTGCTACCCAGGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCCTTGCAGTAGAAGCTaGATAGGAGCCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: GFSVGNLGASSSALGQWEPCSRS*IGAACR
Trigger: CCTACAAGCGGCTCCTATCCAGCTTCTACTGCAAGG...CTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCACAGCTGGGGACGCCTaGGGCTCTGCCCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: HWCLFIGFSVGNLGASSSTAGDA*GSAPWR
Trigger: CCGCCATGGGGCAGAGCCCCAGGCGTCCCCAGCTGT...GGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTTCTCAGTCAGCCCTTTaGGGCTCTGGGGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: AAHPLPAPYNNWVLCSWASQSAL*GSGDSL
Trigger: CAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGA...AGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCAGGCTTTGGGCTTaGGGTAGAGGATGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LDFPWATWVLRAPLWGSGSRLWA*GRGCPF
Trigger: GAAAGGGCATCCTCTACCCCAAGCCCAAAGCCTGCT...CCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTCGGACCCTGCAGGTTTaGCCCCACACTTCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: AAHPLPAPYNNWVLCSWARTLQV*PHTSWH
Trigger: ATGCCAAGAAGTGTGGGGCCAAACCTGCAGGGTCCG...AGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCAAGGGGAGTGCAGCCTaGCCCTTCAAGGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLKGSAA*PFKGPG
Trigger: CCCGGGCCCCTTGAAGGGCCAGGCTGCACTCCCCTT...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTTGCATAGGTTGTGACTaGTGGTGCGTGCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCCIGCD*WCVPGR
Trigger: TCTGCCTGGCACGCACCACCAGTCACAACCTATGCA...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTTGGTGTTGAGGTaGAAGAAGTGGGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LDFPWATWVLRAPLWGSGSLVLR*KKWGAA
Trigger: TGCAGCGCCCCACTTCTTCCACCTCAACACCAAGCT...CCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATCTTCGAGCTCCGCTCTaGGGCAGTGGGAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHLRAPL*GSGSCP
Trigger: TGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAG...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp CTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACTGGGGCTCTTTCACTaGCAGCCCCTCTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LAAVPACCRPLSTPQCTQLGLFH*QPLFAR
Trigger: CCTGGCAAAGAGGGGCTGTCAGTGAAAGAGCCCCAG...TTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCCTCAGGCTGCTGCCTTaGGATAAACCCAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLLRLLP*DKPSFP
Trigger: GGGAAAACTGGGTTTATCTCAAGGCAGCAGCCTGAG...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTTCACCCTCCGTGGACTaGTTCCTGTTCCCTTTGACA +
Preference number: 4 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCSPSVD*FLFPLT
Trigger: TGTCAAAGGGAACAGGAAGCAGTCCACGGAGGGTGA...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGCTGACCAGGAAGGCCTaGTCCTCCTCCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWLTRKA*SSSRSC
Trigger: GCAGGAGCGGGAGGAGGAGCAGGCCTTCCTGGTCAG...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR GCA 90 bp CTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACCAGAGGCCAGGCCCTaGTGTTCTGTGCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LAAVPACCRPLSTPQCTQPEARP*CSVLFL
Trigger: CAGGAACAGCACAGAACAGCAGGGCCTGGCCTCTGG...TTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GTAGAGGATGCCCTTTCTGGAGCCACCTTTATGGAACGCAGAAGGGCGGTTAGCCCCTCCTCCTGGCACTaGAAGGCCTCCACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VEDALSGATFMERRRAVSPSSWH*KASTLL
Trigger: GAGCAAGGTGGAGGCCTTGCAGTGCCAGGAGGAGGG...GCTAACCGCCCTTCTGCGTTCCATAAAGGTGGCTCCAGAAAGGGCATCCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR GCA 90 bp GCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTGCTTGGGGTAGAGGATaGCCTTTCTGGAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: AAHPLPAPYNNWVLCSWAAWGRG*PFWSHL
Trigger: AAGGTGGCTCCAGAAAGGGCATCCTCTACCCCAAGC...AGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCCTCTTCCTCCAGGCTaGGCTTGCTGCCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGPLPPG*ACCPGL
Trigger: CAGGCCTGGGCAGCAAGCGCAGCCTGGAGGAAGAGG...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGGGCTGAAGGGGAGTaGAGCCTGGCCCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWGAEGE*SLALQG
Trigger: CCCTTGAAGGGCCAGGCTGCACTCCCCTTCAGCCCC...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGTGACTGGTGGTGCGTaGCAGGCAGATGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWVTGGA*QADEAG
Trigger: CCCGGCCTCATCTGCCTGGCACGCACCACCAGTCAC...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCGTGGGCAACCTGGGTaGTTCGAGCTCCGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGRGQPG*FELRSG
Trigger: CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACG...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCAGTGACGCCACCGTaGGTGTGGGCTCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWAVTPP*VWAPTR
Trigger: TCTGGTGGGAGCCCACACGCACGGTGGCGTCACTGC...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCAGCGAGATGGGGTTCTaGATTCCGTTCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLSEMGF*IPFCLP
Trigger: TGGCAAGCAGAACGGAATCCAGAACCCCATCTCGCT...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGAGCGAGATGGGGTTCTaGATTCCGTTCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ALVQSPLAAVPACCRPLSSEMGF*IPFCLP
Trigger: TGGCAAGCAGAACGGAATCCAGAACCCCATCTCGCT...CGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAAAAGTCCCTGGGGTGCTaGCTGACAGGCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: LAAVPACCRPLSTPQCTQKSLGC*LTGFST
Trigger: GGTGCTGAAGCCTGTCAGCCAGCACCCCAGGGACTT...TTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCCTGGAGCCACCTTTATaGAACGCAGAAGGGCGGTTA +
Preference number: 4 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLLEPPL*NAEGRL
Trigger: TAACCGCCCTTCTGCGTTCCATAAAGGTGGCTCCAG...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGTCTCGGCTGGGACCTTaGCCATGGGGGACACCCAGC +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWSRLGP*PWGTPS
Trigger: GCTGGGTGTCCCCCATGGCCAAGGTCCCAGCCGAGA...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGACTGTCGAAGGACGTTaGGGGGAAGTGCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: LPVVGPCRLHSVHNTMGWTVEGR*GEVHQA
Trigger: GGCCTGATGCACTTCCCCCCAACGTCCTTCGACAGT...CCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTCAGCTTGGTGTTGAGGTaGAAGAAGTGGGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LPILSQRLITTGSSAPGLSLVLR*KKWGAA
Trigger: TGCAGCGCCCCACTTCTTCCACCTCAACACCAAGCT...GAGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp AGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGCCTACAGCTTGATGGCCCGGGTGTCCTaGGTAGCAGGCACTAGTTCA +
Preference number: 4 (lower is better)
Translates to: RPLSTPQCTQHHGLAYSLMARVS*VAGTSS
Trigger: TGAACTAGTGCCTGCTACCCAGGACACCCGGGCCAT...CAAGCTGTAGGCCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR TCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATTGGCCAGTGGTGACATaGTGCCGTGTGTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHWPVVT*CRVSPC
Trigger: GCAAGGGGACACACGGCATCATGTCACCACTGGCCA...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGTGTAGAAGCAGCCCTTaGAGATGGGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWCRSSP*RWGLPG
Trigger: GCCCGGCAGCCCCCATCTTCAAGGGCTGCTTCTACA...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGTGCGTGCCAGGCAGATaGGGCCGGGCAAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGCVPGR*GRAKSV
Trigger: CACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCA...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GTGTCCTGGGTAGCAGGCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGTCCTACAAAGCGCATTaGGCAAGTTCTTCACACCCG +
Preference number: 4 (lower is better)
Translates to: VSWVAGTSSEPPGSSTCLSYKAH*ASSSHP
Trigger: CGGGTGTGAAGAACTTGCTCAATGCGCTTTGTAGGA...CAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGCCTGCTACCCAGGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR GCA 90 bp GGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGTTCTGGATTCCGTTCTaGTTGCCAGCAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GAAHPLPAPYNNWVLCSWFWIPF*LPAGLG
Trigger: CCCCAAACCTGCTGGCAAGCAGAACGGAATCCAGAA...CCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATGCATCATCTGGTCCATaGGCCGCTCCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHASSGP*AAPPWP
Trigger: AGGCCAAGGAGGAGCGGCGCATGGACCAGATGATGC...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGTGCCGTGTGTCCCCTTaGAGTAGAAGCTGGATAGGA +
Preference number: 4 (lower is better)
Translates to: ELPILSQRLITTGSSAPGCRVSP*SRSWIG
Trigger: TCCTATCCAGCTTCTACTGCAAGGGGACACACGGCA...CCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCAAGGCCTCCACCTTaGTCACCTGGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWARPPP*SPGPGA
Trigger: AGCTCCTGGCCCAGGTGAGCAAGGTGGAGGCCTTGC...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TGGATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTGGACGCCTGGGGCTCTaGCCCATGGCGGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: WIHTGVFLLDFPWATWVLGRLGL*PMAAAL
Trigger: GAGGGCTGCCGCCATGGGGCAGAGCCCCAGGCGTCC...AAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR GCA 90 bp CACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCCCTCTTCCTCCAGGCTaGGCTTGCTGCCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: HWCLFIGFSVGNLGASSSPLPPG*ACCPGL
Trigger: CAGGCCTGGGCAGCAAGCGCAGCCTGGAGGAAGAGG...GGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCGACCAGGCCGGACCCTaGAGGTTTGGCCCCACACTT +
Preference number: 4 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLDQAGP*RFGPTL
Trigger: AAGTGTGGGGCCAAACCTGCAGGGTCCGGCCTGGTC...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGGGGCTGAAGGGGAGTaGAGCCTGGCCCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: HWCLFIGFSVGNLGASSSGAEGE*SLALQG
Trigger: CCCTTGAAGGGCCAGGCTGCACTCCCCTTCAGCCCC...GGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp AGCGGCTTGTCATCCTCCCCCTTCAGGTGCCGCACGTATGGCAGGACCAGCCTCACCCAGTTTTCCCACTaGCTTCTTCTTCACTTGTGC +
Preference number: 4 (lower is better)
Translates to: SGLSSSPFRCRTYGRTSLTQFSH*LLLHLC
Trigger: GCACAAGTGAAGAAGAAGGCAGTGGGAAAACTGGGT...GAGGCTGGTCCTGCCATACGTGCGGCACCTGAAGGGGGAGGATGACAAGCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp TGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACGCTTGCCAGCAGGTTTaGGGGATGCAGGTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: WQQYLPVVGPCRLHSVHNACQQV*GMQVGL
Trigger: TAGACCCACCTGCATCCCCCAAACCTGCTGGCAAGC...GTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGAGTCCTCCAGCGAGATaGGGTTCTGGATTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: ELPILSQRLITTGSSAPGSPPAR*GSGFRS
Trigger: AGAACGGAATCCAGAACCCCATCTCGCTGGAGGACT...CCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAAACTGTTTCCTGGGCTTaGAGGTGGGCAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LAAVPACCRPLSTPQCTQTVSWA*RWAAAC
Trigger: ACAAGCCGCTGCCCACCTCCAAGCCCAGGAAACAGT...TTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGAGCAGGCTTTGGGCTTaGGGTAGAGGATGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LPVVGPCRLHSVHNTMGWSRLWA*GRGCPF
Trigger: GAAAGGGCATCCTCTACCCCAAGCCCAAAGCCTGCT...CCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGCTGGGACCTTGGCCATaGGGGACACCCAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWLGPWP*GTPSRL
Trigger: AAGCCTGCTGGGTGTCCCCCATGGCCAAGGTCCCAG...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCCGGGCAAAGTCTGTaGCGGAGGGCACTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWAGQSL*RRALSK
Trigger: CTTCGACAGTGCCCTCCGCCACAGACTTTGCCCGGC...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp AGCCGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGTTATTGGATTTTCCGTaGGCAACCTGGGTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SRCLEFSVSPLGLWGLSGLLDFP*ATWVLR
Trigger: TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAA...CCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR TCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGTGGCCAGTGGTGACATaGTGCCGTGTGTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGWPVVT*CRVSPC
Trigger: GCAAGGGGACACACGGCATCATGTCACCACTGGCCA...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp CACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCTGTAGAAGCAGCCCTTaGAGATGGGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: HWCLFIGFSVGNLGASSSCRSSP*RWGLPG
Trigger: GCCCGGCAGCCCCCATCTTCAAGGGCTGCTTCTACA...GGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCTGGGGCTCTTTCACTaGCAGCCCCTCTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGLGLFH*QPLFAR
Trigger: CCTGGCAAAGAGGGGCTGTCAGTGAAAGAGCCCCAG...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATCCTACAGCTTGGTGTTaGGGTGGAAGAAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHPTAWC*GGRSGA
Trigger: CGCCCCACTTCTTCCACCTCAACACCAAGCTGTAGG...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGTGGGTCAGCAGCATCTaGTTTGGTCTTTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: ELPILSQRLITTGSSAPGWVSSI*FGLSWH
Trigger: ATGCCAGGAAAGACCAAAGCAGATGCTGCTGACCCA...CCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCTGGCTGGGAAGTGGTaGTGGGTCAGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGLAGKW*WVSSIC
Trigger: GCAGATGCTGCTGACCCAGCACCACTTCCCAGCCAG...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCCAGGCTGCGCTTGCTaGCCAGGCCTGGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFEPGCAC*PGLGYW
Trigger: CCAGTAGCCCAGGCCTGGGCAGCAAGCGCAGCCTGG...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAAGCAGAGGCTCAGAGGTaGCAGTTGACGTCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: LAAVPACCRPLSTPQCTQAEAQR*QLTSLN
Trigger: GTTGAGAGACGTCAACTGGCACCTCTGAGCCTCTGC...TTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGGCGTCACCCTCCGTaGACTGCTTCCTGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWGRHPP*TASCSL
Trigger: AAGGGAACAGGAAGCAGTCCACGGAGGGTGACGCCC...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGTGCTTGAAGCCGAGATaGGGCACCCTCTCGATGGGC +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGCLKPR*GTLSMG
Trigger: GCCCATCGAGAGGGTGCCCCATCTCGGCTTCAAGCA...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCCTCCTGGCTGGGAAGTaGTGCTGGGTCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLLLAGK*CWVSSI
Trigger: GATGCTGCTGACCCAGCACCACTTCCCAGCCAGGAG...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCTCCTGGCTGGGAAGTaGTGCTGGGTCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGLLAGK*CWVSSI
Trigger: GATGCTGCTGACCCAGCACCACTTCCCAGCCAGGAG...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGCTCCTGGCTGGGAAGTaGTGCTGGGTCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWLLAGK*CWVSSI
Trigger: GATGCTGCTGACCCAGCACCACTTCCCAGCCAGGAG...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCCTCAGGACAGCCGCTaGCACCCACAAAGGACACAG +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGPQDSR*HPQRTQ
Trigger: CTGTGTCCTTTGTGGGTGCCAGCGGCTGTCCTGAGG...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp AGGATGCCCTTTCTGGAGCCACCTTTATGGAACGCAGAAGGGCGGTTAGCGTCTACACCCAGCAGGCTTTaGGCTTGGGGTAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: RMPFLEPPLWNAEGRLASTPSRL*AWGRGC
Trigger: GCATCCTCTACCCCAAGCCCAAAGCCTGCTGGGTGT...AGACGCTAACCGCCCTTCTGCGTTCCATAAAGGTGGCTCCAGAAAGGGCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp ACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCTCTCGGCTGGGACCTTaGCCATGGGGGACACCCAGC +
Preference number: 4 (lower is better)
Translates to: TLVSFYWIFRGQPGCFELSRLGP*PWGTPS
Trigger: GCTGGGTGTCCCCCATGGCCAAGGTCCCAGCCGAGA...GAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATCGGACCCTGCAGGTTTaGCCCCACACTTCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHRTLQV*PHTSWH
Trigger: ATGCCAAGAAGTGTGGGGCCAAACCTGCAGGGTCCG...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAAGCGCCTTATAACAACTaGGTCCTCTGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LAAVPACCRPLSTPQCTQAPYNN*VLCSWA
Trigger: AGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGC...TTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TGCCACCTGGGGCCTGCAATCCCTCCTGAGGGGTCAGCCGGTGCCTGGAGTTCTCTGGTGTCTTTTTATTaGATTTTCCGTGGGCAACCT +
Preference number: 4 (lower is better)
Translates to: CHLGPAIPPEGSAGAWSSLVSFY*IFRGQP
Trigger: AGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG...AGAACTCCAGGCACCGGCTGACCCCTCAGGAGGGATTGCAGGCCCCAGGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR TCA 90 bp AGGATGCCCTTTCTGGAGCCACCTTTATGGAACGCAGAAGGGCGGTTAGCGTCTCTTTTTGGCCAGTGGTaGCATGATGCCGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: RMPFLEPPLWNAEGRLASLFGQW*HDAVCP
Trigger: GGGACACACGGCATCATGTCACCACTGGCCAAAAAG...AGACGCTAACCGCCCTTCTGCGTTCCATAAAGGTGGCTCCAGAAAGGGCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR TCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGGCCACATTTGGTGGTaGCGGACAGTGAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGGHIWW*RTVRAP
Trigger: AGGAGCTCTCACTGTCCGTCACCACCAAATGTGGCC...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR GCA 90 bp TGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACTCACCCTCCGTGGACTaGTTCCTGTTCCCTTTGACA +
Preference number: 4 (lower is better)
Translates to: WQQYLPVVGPCRLHSVHNSPSVD*FLFPLT
Trigger: TGTCAAAGGGAACAGGAAGCAGTCCACGGAGGGTGA...GTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAATGCCGTGTGTCCCCTTaGAGTAGAAGCTGGATAGGA +
Preference number: 4 (lower is better)
Translates to: LAAVPACCRPLSTPQCTQCRVSP*SRSWIG
Trigger: TCCTATCCAGCTTCTACTGCAAGGGGACACACGGCA...TTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGGGGGCTGAAGGGGAGTaGAGCCTGGCCCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFEGAEGE*SLALQG
Trigger: CCCTTGAAGGGCCAGGCTGCACTCCCCTTCAGCCCC...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCCTCCCACCCCTCCTGTaGTCTAGCGTTGCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: HWCLFIGFSVGNLGASSSLPPLL*SSVACR
Trigger: CCTACAGGCAACGCTAGAGCACAGGAGGGGTGGGAG...GGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTTTCCTGGCATCATCTaGTCCATGCGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVSFYWIFRGQPGCFELRFPGII*SMRRSS
Trigger: GGAGGAGCGGCGCATGGACCAGATGATGCCAGGAAA...GCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACTCCACCTTGCTCACCTaGGCCAGGAGCTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: WQQYLPVVGPCRLHSVHNSTLLT*ARSFFL
Trigger: CAAAAAGAAGCTCCTGGCCCAGGTGAGCAAGGTGGA...GTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGTGGGAGGTGAACAGCTaGGGACGCCTGGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFEWEVNS*GRLGLC
Trigger: GCAGAGCCCCAGGCGTCCCCAGCTGTTCACCTCCCA...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGACACCCAGCAGGCTTTaGGCTTGGGGTAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGTPSRL*AWGRGC
Trigger: GCATCCTCTACCCCAAGCCCAAAGCCTGCTGGGTGT...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCGGACCCTGCAGGTTTaGCCCCACACTTCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGRTLQV*PHTSWH
Trigger: ATGCCAAGAAGTGTGGGGCCAAACCTGCAGGGTCCG...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCACTGTCGAAGGACGTTaGGGGGAAGTGCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: LVSFYWIFRGQPGCFELRTVEGR*GEVHQA
Trigger: GGCCTGATGCACTTCCCCCCAACGTCCTTCGACAGT...GCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GTCGACTCCACAGTGTACACAACACCATGGGCTGGCCTACAGCTTGGTGTTGAGTGCATAGGTTGTGACTaGTGGTGCGTGCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VDSTVYTTPWAGLQLGVECIGCD*WCVPGR
Trigger: TCTGCCTGGCACGCACCACCAGTCACAACCTATGCA...CTCAACACCAAGCTGTAGGCCAGCCCATGGTGTTGTGTACACTGTGGAGTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTTCGAGCTCCGCTCTaGGGCAGTGGGAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFELRAPL*GSGSCP
Trigger: TGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAG...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCTTTCCGTGGGCAACCTaGGTGCTTCGAGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: HWCLFIGFSVGNLGASSSFPWAT*VLRAPL
Trigger: GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAA...GGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGTTAACTCCAGCGAGATaGGGTTCTGGATTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: GAAHPLPAPYNNWVLCSWLTPAR*GSGFRS
Trigger: AGAACGGAATCCAGAACCCCATCTCGCTGGAGTTAA...CCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR TCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATCTCAGGCTGCTGCCTTaGGATAAACCCAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHLRLLP*DKPSFP
Trigger: GGGAAAACTGGGTTTATCTCAAGGCAGCAGCCTGAG...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GTAGAGGATGCCCTTTCTGGAGCCACCTTTATGGAACGCAGAAGGGCGGTTAGCTTCTGGATTCCGTTCTaGTTGCCAGCAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VEDALSGATFMERRRAVSFWIPF*LPAGLG
Trigger: CCCCAAACCTGCTGGCAAGCAGAACGGAATCCAGAA...GCTAACCGCCCTTCTGCGTTCCATAAAGGTGGCTCCAGAAAGGGCATCCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR GCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCGCTTGGGGTAGAGGATaGCCTTTCTGGAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLAWGRG*PFWSHL
Trigger: AAGGTGGCTCCAGAAAGGGCATCCTCTACCCCAAGC...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TGGATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTGTGACTGGTGGTGCGTaGCAGGCAGATGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: WIHTGVFLLDFPWATWVLVTGGA*QADEAG
Trigger: CCCGGCCTCATCTGCCTGGCACGCACCACCAGTCAC...AAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR GCA 90 bp CTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCGAAGAAGTGGGGCGCTaGATAGGTTGTGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVSFYWIFRGQPGCFELREEVGR*IGCDWW
Trigger: CCACCAGTCACAACCTATGCAGCGCCCCACTTCTTC...GCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCGAAGAAGTGGGGCGCTaGATAGGTTGTGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLEEVGR*IGCDWW
Trigger: CCACCAGTCACAACCTATGCAGCGCCCCACTTCTTC...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGTCTTGTACTGTTTCCTaGGCTTGGAGGTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGSCTVS*AWRWAA
Trigger: CGCTGCCCACCTCCAAGCCCAGGAAACAGTACAAGA...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp ATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGATGCGCCGCTCCTCCTTaGCCTTCTTCGGCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: IHTGVFLLDFPWATWVLRCAAPP*PSSASR
Trigger: CCGAGAGGCCGAAGAAGGCCAAGGAGGAGCGGCGCA...TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATCCTTGCAGTAGAAGCTaGATAGGAGCCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHPCSRS*IGAACR
Trigger: CCTACAAGCGGCTCCTATCCAGCTTCTACTGCAAGG...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATCTGGAGCCACCTTTATaGAACGCAGAAGGGCGGTTA +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHLEPPL*NAEGRL
Trigger: TAACCGCCCTTCTGCGTTCCATAAAGGTGGCTCCAG...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCATGGCCCGGGTGTCCTaGGTAGCAGGCACTAGTTCA +
Preference number: 4 (lower is better)
Translates to: HWCLFIGFSVGNLGASSSMARVS*VAGTSS
Trigger: TGAACTAGTGCCTGCTACCCAGGACACCCGGGCCAT...GGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGCTGGTGTCTTTTTATTaGATTTTCCGTGGGCAACCT +
Preference number: 4 (lower is better)
Translates to: ALVQSPLAAVPACCRPLSLVSFY*IFRGQP
Trigger: AGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG...CGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTGGGGCTCTTTCACTaGCAGCCCCTCTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFELGLFH*QPLFAR
Trigger: CCTGGCAAAGAGGGGCTGTCAGTGAAAGAGCCCCAG...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCTCAGGCTGCTGCCTTaGGATAAACCCAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGLRLLP*DKPSFP
Trigger: GGGAAAACTGGGTTTATCTCAAGGCAGCAGCCTGAG...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATCCCCAGCTTCTCCACTaGTTTGTAGATCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHPQLLH*FVDLPQ
Trigger: CTGTGGAAGATCTACAAAGCAGTGGAGAAGCTGGGG...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGGCATCATCTGGTCCATaGGCCGCTCCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFEASSGP*AAPPWP
Trigger: AGGCCAAGGAGGAGCGGCGCATGGACCAGATGATGC...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGTGCCGTGTGTCCCCTTaGAGTAGAAGCTGGATAGGA +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGCRVSP*SRSWIG
Trigger: TCCTATCCAGCTTCTACTGCAAGGGGACACACGGCA...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp ACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCAAGAAGTCCCTGGGGTaGTGGCTGACAGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: TLVSFYWIFRGQPGCFELKKSLG*WLTGFS
Trigger: GCTGAAGCCTGTCAGCCAGCACCCCAGGGACTTCTT...GAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp ACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCTTCTTCTTCACTTGTaGCAGGCTGCCCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TLVSFYWIFRGQPGCFELLLLHL*QAAQPG
Trigger: CCCTGGCTGGGCAGCCTGGCACAAGTGAAGAAGAAG...GAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCCACCCCGTCCCTTCTaGAGACCGAGGGAAGACAAG +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFEPPRPF*RPREDK
Trigger: CTTGTCTTCCCTCGGTCTGCAGAAGGGACGGGGTGG...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR GCA 90 bp TGGATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGTAGCCCACGCTCTTaGCCTCTTCCCCTGACGCTC +
Preference number: 4 (lower is better)
Translates to: WIHTGVFLLDFPWATWVLRSPRS*PLPLTL
Trigger: GAGCGTCAGGGGAAGAGGGCAAGAGCGTGGGCTACG...AAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCAGTCCTCCAGCGAGATaGGGTTCTGGATTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: LVSFYWIFRGQPGCFELRSPPAR*GSGFRS
Trigger: AGAACGGAATCCAGAACCCCATCTCGCTGGAGGACT...GCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCAGGTGCCGCACGTATaGCAGGACCAGCCTCTCGTA +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFEQVPHV*QDQPLV
Trigger: TACGAGAGGCTGGTCCTGCCATACGTGCGGCACCTG...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGTCCACCTTGCTCACCTaGGCCAGGAGCTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: VFLLDFPWATWVLRAPLWSTLLT*ARSFFL
Trigger: CAAAAAGAAGCTCCTGGCCCAGGTGAGCAAGGTGGA...CCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGAAGTCCCTGGGGTGCTaGCTGACAGGCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFEKSLGC*LTGFST
Trigger: GGTGCTGAAGCCTGTCAGCCAGCACCCCAGGGACTT...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCCGGAGCACTCCTTACTaGCCCAAGACTCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLRSTPY*PKTLQT
Trigger: TGTTTGCAGAGTCTTGGGCCAGTAAGGAGTGCTCCG...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR TCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCCTACAGCTTGGTGTTaGGGTGGAAGAAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFEPTAWC*GGRSGA
Trigger: CGCCCCACTTCTTCCACCTCAACACCAAGCTGTAGG...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGTCAGCAGCATCTaGTTTGGTCTTTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GVFLLDFPWATWVLRAPLWVSSI*FGLSWH
Trigger: ATGCCAGGAAAGACCAAAGCAGATGCTGCTGACCCA...GAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATACCCAGTTTTCCCACTaGCTTCTTCTTCACTTGTGC +
Preference number: 4 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHTQFSH*LLLHLC
Trigger: GCACAAGTGAAGAAGAAGGCAGTGGGAAAACTGGGT...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp CACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCCTGGGCTCAGGCTGCTaGCTTGAGATAAACCCAGTT +
Preference number: 4 (lower is better)
Translates to: HWCLFIGFSVGNLGASSSLGSGC*LEINPV
Trigger: AACTGGGTTTATCTCAAGGCAGCAGCCTGAGCCCAG...GGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp ACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCGCTGGGAAGTGGTGCTaGGTCAGCAGCATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TLVSFYWIFRGQPGCFELAGKWC*VSSICF
Trigger: AAAGCAGATGCTGCTGACCCAGCACCACTTCCCAGC...GAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGTCTCAGTCAGCCCTTTaGGGCTCTGGGGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFESQSAL*GSGDSL
Trigger: CAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGA...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp CTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGCTGGTGTCTTTTTATTaGATTTTCCGTGGGCAACCT +
Preference number: 4 (lower is better)
Translates to: LPVVGPCRLHSVHNTMGWLVSFY*IFRGQP
Trigger: AGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG...CCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR TCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTTTTTGGCCAGTGGTaGCATGATGCCGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFELFGQW*HDAVCP
Trigger: GGGACACACGGCATCATGTCACCACTGGCCAAAAAG...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp ACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCTTCTGGATTCCGTTCTaGTTGCCAGCAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: TLVSFYWIFRGQPGCFELFWIPF*LPAGLG
Trigger: CCCCAAACCTGCTGGCAAGCAGAACGGAATCCAGAA...GAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp ATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAACTGTTTCCTGGGCTTaGAGGTGGGCAGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: IHTGVFLLDFPWATWVLRTVSWA*RWAAAC
Trigger: ACAAGCCGCTGCCCACCTCCAAGCCCAGGAAACAGT...TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CCA 90 bp TGGATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTACTGTCGAAGGACGTTaGGGGGAAGTGCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: WIHTGVFLLDFPWATWVLTVEGR*GEVHQA
Trigger: GGCCTGATGCACTTCCCCCCAACGTCCTTCGACAGT...AAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CCA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGGCGCCTTATAACAACTaGGTCCTCTGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFEAPYNN*VLCSWA
Trigger: AGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGC...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CCA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCCGAAAGAGGAACAGTaGATCCTACAAAGCGCATTG +
Preference number: 4 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGPKEEQ*ILQSAL
Trigger: CAATGCGCTTTGTAGGATCCACTGTTCCTCTTTCGG...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CCA 90 bp TGGATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTGCTGGGAAGTGGTGCTaGGTCAGCAGCATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: WIHTGVFLLDFPWATWVLAGKWC*VSSICF
Trigger: AAAGCAGATGCTGCTGACCCAGCACCACTTCCCAGC...AAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR GCA 90 bp TGGATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCTGGGCTCAGGCTGCTaGCTTGAGATAAACCCAGTT +
Preference number: 4 (lower is better)
Translates to: WIHTGVFLLDFPWATWVLLGSGC*LEINPV
Trigger: AACTGGGTTTATCTCAAGGCAGCAGCCTGAGCCCAG...AAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CCA 90 bp TGGATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCCTTGCAGTAGAAGCTaGATAGGAGCCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: WIHTGVFLLDFPWATWVLPCSRS*IGAACR
Trigger: CCTACAAGCGGCTCCTATCCAGCTTCTACTGCAAGG...AAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CCA 90 bp ACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCTTATTGGATTTTCCGTaGGCAACCTGGGTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: TLVSFYWIFRGQPGCFELLLDFP*ATWVLR
Trigger: TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAA...GAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR GCA 90 bp ATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGACCCCAGCTTCTCCACTaGTTTGTAGATCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: IHTGVFLLDFPWATWVLRPQLLH*FVDLPQ
Trigger: CTGTGGAAGATCTACAAAGCAGTGGAGAAGCTGGGG...TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR GCA 90 bp TGGATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTACTGGCCCAAGACTCTaGAAACAAAGGGACACTGGA +
Preference number: 4 (lower is better)
Translates to: WIHTGVFLLDFPWATWVLTGPRL*KQRDTG
Trigger: TCCAGTGTCCCTTTGTTTGCAGAGTCTTGGGCCAGT...AAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CCA 90 bp GGGCGACCCCTAGACACCGCGGAGGGACGGAGCGCGGGCCCGGGTTaGCCCGCAGCTCCCGCCGAGCGCGAAGCCGGGCATCGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: GRPLDTAEGRSAGPG*PAAPAEREAGHRLQ
Trigger: TTGCAGGCGATGCCCGGCTTCGCGCTCGGCGGGAGCTGCGGGCCAACCCGGGCCCGCGCTCCGTCCCTCCGCGGTGTCTAGGGGTCGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS GCA 90 bp CGGGGTCCTTGCAGCTCCGGCCGCCCTCGCAGGGACTCGAAGGACTaGAGTTTGGCAGCTGCTCTGCGGCTCCAGCAGCGGCCAGCCGAT +
Preference number: 5 (lower is better)
Translates to: RGPCSSGRPRRDSKD*SLAAALRLQQRPAD
Trigger: ATCGGCTGGCCGCTGCTGGAGCCGCAGAGCAGCTGCCAAACTGCAGTCCTTCGAGTCCCTGCGAGGGCGGCCGGAGCTGCAAGGACCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS GCA 90 bp CCCTCCTGTGCTCTAGCGTTGCCTGTAGGCGCAGTGACGCCACCGTaGGTGTGGGCTCCCACCAGAGGAGCCCGGGTGGGGCAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: PSCALALPVGAVTPP*VWAPTRGARVGQEA
Trigger: TGCCTCTTGCCCCACCCGGGCTCCTCTGGTGGGAGCCCACACGCACGGTGGCGTCACTGCGCCTACAGGCAACGCTAGAGCACAGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS GCA 90 bp CTCCGGCCGCCCTCGCAGGGACTCGAAGGACTGCAGTTTGGCAGCTaGTCTGCGGCTCCAGCAGCGGCCAGCCGATTCTCTCTCCTAGGG +
Preference number: 5 (lower is better)
Translates to: LRPPSQGLEGLQFGS*SAAPAAASRFSLLG
Trigger: CCCTAGGAGAGAGAATCGGCTGGCCGCTGCTGGAGCCGCAGAGCAGCTGCCAAACTGCAGTCCTTCGAGTCCCTGCGAGGGCGGCCGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS-3UTR CAA 90 bp GGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGTGGACCCGCAGCGCCTaGGGACCCCCTGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GAAHPLPAPYNNWVLCSWWTRSA*GPPGPS
Trigger: CGAGGGCCCAGGGGGTCCCAAGGCGCTGCGGGTCCA...CCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS TCA 90 bp GTGGGGCGCTGCATAGGTTGTGACTGGTGGTGCGTGCCAGGCAGATaGGGCCGGGCAAAGTCTGTGGCGGAGGGCACTGGGCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: VGRCIGCDWWCVPGR*GRAKSVAEGTGPGA
Trigger: AGCTCCTGGCCCAGTGCCCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACCAGTCACAACCTATGCAGCGCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673792.1
CDS GCA 90 bp GCCGCCCTCGCAGGGACTCGAAGGACTGCAGTTTGGCAGCTGCTCTaGGGCTCCAGCAGCGGCCAGCCGATTCTCTCTCCTAGGGCCATG +
Preference number: 5 (lower is better)
Translates to: AALAGTRRTAVWQLL*GSSSGQPILSPRAM
Trigger: CATGGCCCTAGGAGAGAGAATCGGCTGGCCGCTGCTGGAGCCGCAGAGCAGCTGCCAAACTGCAGTCCTTCGAGTCCCTGCGAGGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS CCA 90 bp CGGAGCACTCCTTACTGGCCCAAGACTCTGCAAACAAAGGGACACTaGACCCGCAGCGCCTTGGGACCCCCTGGGCCCTCGGGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: RSTPYWPKTLQTKGH*TRSALGPPGPSGVL
Trigger: CAGGACCCCCGAGGGCCCAGGGGGTCCCAAGGCGCTGCGGGTCCAGTGTCCCTTTGTTTGCAGAGTCTTGGGCCAGTAAGGAGTGCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CCA 90 bp TGTGCTCTAGCGTTGCCTGTAGGCGCAGTGACGCCACCGTGCGTGTaGGCTCCCACCAGAGGAGCCCGGGTGGGGCAAGAGGCACCTGTT +
Preference number: 5 (lower is better)
Translates to: CALALPVGAVTPPCV*APTRGARVGQEAPV
Trigger: AACAGGTGCCTCTTGCCCCACCCGGGCTCCTCTGGTGGGAGCCCACACGCACGGTGGCGTCACTGCGCCTACAGGCAACGCTAGAGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CCA 90 bp CTTGCAGCTCCGGCCGCCCTCGCAGGGACTCGAAGGACTGCAGTTTaGCAGCTGCTCTGCGGCTCCAGCAGCGGCCAGCCGATTCTCTCT +
Preference number: 5 (lower is better)
Translates to: LAAPAALAGTRRTAV*QLLCGSSSGQPILS
Trigger: AGAGAGAATCGGCTGGCCGCTGCTGGAGCCGCAGAGCAGCTGCCAAACTGCAGTCCTTCGAGTCCCTGCGAGGGCGGCCGGAGCTGCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS-3UTR CAA 90 bp TGCCACCTGGGGCCTGCAATCCCTCCTGAGGGGTCAGCCGGTGCCTGGAGTTCTGAGGTGGGCAGCGGCTaGTCATCCTCCCCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: CHLGPAIPPEGSAGAWSSEVGSG*SSSPFR
Trigger: CCTGAAGGGGGAGGATGACAAGCCGCTGCCCACCTC...AGAACTCCAGGCACCGGCTGACCCCTCAGGAGGGATTGCAGGCCCCAGGTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CAA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCTACTGTTTCCTGGGCTaGGAGGTGGGCAGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: SVGNLGASSSALGQWELPYCFLG*EVGSGL
Trigger: CAAGCCGCTGCCCACCTCCAAGCCCAGGAAACAGTA...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS CCA 90 bp GAGGCACCTGTTGTCCTCCCCTGGGGCCCGCGGAGCACTCCTTACTaGCCCAAGACTCTGCAAACAAAGGGACACTGGACCCGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: EAPVVLPWGPRSTPY*PKTLQTKGHWTRSA
Trigger: GGCGCTGCGGGTCCAGTGTCCCTTTGTTTGCAGAGTCTTGGGCCAGTAAGGAGTGCTCCGCGGGCCCCAGGGGAGGACAACAGGTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CCA 90 bp ACCAGAGGAGCCCGGGTGGGGCAAGAGGCACCTGTTGTCCTCCCCTaGGGCCCGCGGAGCACTCCTTACTGGCCCAAGACTCTGCAAACA +
Preference number: 5 (lower is better)
Translates to: TRGARVGQEAPVVLP*GPRSTPYWPKTLQT
Trigger: TGTTTGCAGAGTCTTGGGCCAGTAAGGAGTGCTCCGCGGGCCCCAGGGGAGGACAACAGGTGCCTCTTGCCCCACCCGGGCTCCTCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CAA 90 bp GGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCATCCTTGCTTCCTGTTCCCTTaGACAGGGGCTGCCATGGCC +
Preference number: 5 (lower is better)
Translates to: GQPGCFELRSGAVGAAHPCFLFP*TGAAMA
Trigger: GGCCATGGCAGCCCCTGTCAAAGGGAACAGGAAGCA...AGGATGGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000412735.5
CDS-3UTR CAA 90 bp GCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTGGCAAGAGGCACCTGTaGTCCTCCCCTGGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: AAHPLPAPYNNWVLCSWAGKRHL*SSPGAR
Trigger: GCGGGCCCCAGGGGAGGACAACAGGTGCCTCTTGCC...AGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CCA 90 bp TCTGCGGCTCCAGCAGCGGCCAGCCGATTCTCTCTCCTAGGGCCATaGACTGCTGGCCCAAGCAGTTTTCCCAACACGGGGCGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: SAAPAAASRFSLLGP*TAGPSSFPNTGRAE
Trigger: TTCTGCCCGCCCCGTGTTGGGAAAACTGCTTGGGCCAGCAGTCCATGGCCCTAGGAGAGAGAATCGGCTGGCCGCTGCTGGAGCCGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS-3UTR CAA 90 bp GCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGATGCGCCGCTCCTCCTaGGCCTTCTTCGGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: ALVQSPLAAVPACCRPLSMRRSS*AFFGLS
Trigger: CGAGAGGCCGAAGAAGGCCAAGGAGGAGCGGCGCAT...CGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS GCA 90 bp GGCTCCAGCAGCGGCCAGCCGATTCTCTCTCCTAGGGCCATGGACTaGTGGCCCAAGCAGTTTTCCCAACACGGGGCGGGCAGAACAGAT +
Preference number: 5 (lower is better)
Translates to: GSSSGQPILSPRAMD*WPKQFSQHGAGRTD
Trigger: ATCTGTTCTGCCCGCCCCGTGTTGGGAAAACTGCTTGGGCCAGCAGTCCATGGCCCTAGGAGAGAGAATCGGCTGGCCGCTGCTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS CCA 90 bp GGCTCCCCGGACCATCGGCGCAGCCCGCGGCCGAAAGAGGAACAGTaGATCCTACAAAGCGCATTGAGCAAGTTCTTCACACCCGCGCAG +
Preference number: 5 (lower is better)
Translates to: GSPDHRRSPRPKEEQ*ILQSALSKFFTPAQ
Trigger: CTGCGCGGGTGTGAAGAACTTGCTCAATGCGCTTTGTAGGATCCACTGTTCCTCTTTCGGCCGCGGGCTGCGCCGATGGTCCGGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CCA 90 bp TCCAGCAGCGGCCAGCCGATTCTCTCTCCTAGGGCCATGGACTGCTaGCCCAAGCAGTTTTCCCAACACGGGGCGGGCAGAACAGATGGG +
Preference number: 5 (lower is better)
Translates to: SSSGQPILSPRAMDC*PKQFSQHGAGRTDG
Trigger: CCCATCTGTTCTGCCCGCCCCGTGTTGGGAAAACTGCTTGGGCCAGCAGTCCATGGCCCTAGGAGAGAGAATCGGCTGGCCGCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS-3UTR CAA 90 bp GCCGGTGCCTGGAGTTCTCAGTCAGCCCTTTGGGGCTCTGGGGACTCTCTGGGATGCTTCCTGTTCCCTTaGACAGGGGCTGCCATGGCC +
Preference number: 5 (lower is better)
Translates to: AGAWSSQSALWGSGDSLGCFLFP*TGAAMA
Trigger: GGCCATGGCAGCCCCTGTCAAAGGGAACAGGAAGCA...TCCCAGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAACTCCAGGCACCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CAA 90 bp CTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTCATGCGCCGCTCCTCCTaGGCCTTCTTCGGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: LPILSQRLITTGSSAPGLMRRSS*AFFGLS
Trigger: CGAGAGGCCGAAGAAGGCCAAGGAGGAGCGGCGCAT...GAGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp TGCCACCTGGGGCCTGCAATCCCTCCTGAGGGGTCAGCCGGTGCCTGGAGTTCTGGGCTGGCCTACAGCTaGGTGTTGAGGTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: CHLGPAIPPEGSAGAWSSGLAYS*VLRWKK
Trigger: CTTCTTCCACCTCAACACCAAGCTGTAGGCCAGCCC...AGAACTCCAGGCACCGGCTGACCCCTCAGGAGGGATTGCAGGCCCCAGGTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CAA 90 bp TCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCCGCTCAGAGGTGCCAGTaGACGTCTCTCAACTGTAGA +
Preference number: 5 (lower is better)
Translates to: SVGNLGASSSALGQWELPAQRCQ*TSLNCR
Trigger: TCTACAGTTGAGAGACGTCAACTGGCACCTCTGAGC...GGGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CCA 90 bp CCAGCGAGATGGGGTTCTGGATTCCGTTCTGCTTGCCAGCAGGTTTaGGGGATGCAGGTGGGTCTAGGGCGTCACCCTCCGTGGACTGCT +
Preference number: 5 (lower is better)
Translates to: PARWGSGFRSACQQV*GMQVGLGRHPPWTA
Trigger: AGCAGTCCACGGAGGGTGACGCCCTAGACCCACCTGCATCCCCCAAACCTGCTGGCAAGCAGAACGGAATCCAGAACCCCATCTCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
ENST00000673792.1
CDS-3UTR CAA 90 bp CTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGGAGGTGGGCAGCGGCTaGTCATCCTCCCCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LPVVGPCRLHSVHNTMGWEVGSG*SSSPFR
Trigger: CCTGAAGGGGGAGGATGACAAGCCGCTGCCCACCTC...CCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp CTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTCTGCTTGCCAGCAGGTTaGGGGGATGCAGGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: LPILSQRLITTGSSAPGLCLPAG*GDAGGS
Trigger: AGACCCACCTGCATCCCCCAAACCTGCTGGCAAGCA...GAGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp GGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGTACTGTTTCCTGGGCTaGGAGGTGGGCAGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: GAAHPLPAPYNNWVLCSWYCFLG*EVGSGL
Trigger: CAAGCCGCTGCCCACCTCCAAGCCCAGGAAACAGTA...CCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp TGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACATGCGCCGCTCCTCCTaGGCCTTCTTCGGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: WQQYLPVVGPCRLHSVHNMRRSS*AFFGLS
Trigger: CGAGAGGCCGAAGAAGGCCAAGGAGGAGCGGCGCAT...GTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp TTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGTTCTCAGTCAGCCCTTaGGGGCTCTGGGGACTCTCT +
Preference number: 5 (lower is better)
Translates to: LDFPWATWVLRAPLWGSGFSVSP*GLWGLS
Trigger: AGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAA...CCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp GTCGACTCCACAGTGTACACAACACCATGGGCTGGCCTACAGCTTGGTGTTGAGCTCTCGGCTGGGACCTaGGCCATGGGGGACACCCAG +
Preference number: 5 (lower is better)
Translates to: VDSTVYTTPWAGLQLGVELSAGT*AMGDTQ
Trigger: CTGGGTGTCCCCCATGGCCAAGGTCCCAGCCGAGAG...CTCAACACCAAGCTGTAGGCCAGCCCATGGTGTTGTGTACACTGTGGAGTCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CAA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTGGGCTGGCCTACAGCTaGGTGTTGAGGTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCGLAYS*VLRWKK
Trigger: CTTCTTCCACCTCAACACCAAGCTGTAGGCCAGCCC...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS GCA 90 bp GAGGCGGCGCCCGGTCACCAGCTCATAGGCCCCCAGCTTCTCCACTaGTTTGTAGATCTTCCACAGGTTAACTCCAGCGAGATGGGGTTC +
Preference number: 5 (lower is better)
Translates to: EAAPGHQLIGPQLLH*FVDLPQVNSSEMGF
Trigger: GAACCCCATCTCGCTGGAGTTAACCTGTGGAAGATCTACAAAGCAGTGGAGAAGCTGGGGGCCTATGAGCTGGTGACCGGGCGCCGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS CCA 90 bp ACAGCGCTGCAGGCTCACCCCAGGGATATGCAGTTTGGCAAGGACTaGGAGGTGCCTTCCTTACCAGCTCATAGGCCCCCAGCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: TALQAHPRDMQFGKD*EVPSLPAHRPPASP
Trigger: TGGAGAAGCTGGGGGCCTATGAGCTGGTAAGGAAGGCACCTCCCAGTCCTTGCCAAACTGCATATCCCTGGGGTGAGCCTGCAGCGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS-3UTR CAA 90 bp TTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGTGGATTCCGTTCTGCTaGCCAGCAGGTTTGGGGGAT +
Preference number: 5 (lower is better)
Translates to: LDFPWATWVLRAPLWGSGWIPFC*PAGLGD
Trigger: ATCCCCCAAACCTGCTGGCAAGCAGAACGGAATCCA...CCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp AGCCCCCTGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTCACAGGTTAATCTGCTaGAAGCCGAGATGGGGCACC +
Preference number: 5 (lower is better)
Translates to: SPLAAVPACCRPLSTPQCHRLIC*KPRWGT
Trigger: GGTGCCCCATCTCGGCTTCAAGCAGATTAACCTGTG...ACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CAA 90 bp AGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGCCTACAGCTTGTACTGTTTCCTGGGCTaGGAGGTGGGCAGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: RPLSTPQCTQHHGLAYSLYCFLG*EVGSGL
Trigger: CAAGCCGCTGCCCACCTCCAAGCCCAGGAAACAGTA...CAAGCTGTAGGCCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CAA 90 bp TTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGCTGCCTTCTCCTTAGCCATCTaGTACTGTTTCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: FRGQPGCFELRSGAVGAAFSLAI*YCFLGL
Trigger: CAAGCCCAGGAAACAGTACAAGATGGCTAAGGAGAA...GGCAGCTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp GCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTTTCTCAGTCAGCCCTTaGGGGCTCTGGGGACTCTCT +
Preference number: 5 (lower is better)
Translates to: AAHPLPAPYNNWVLCSWAFSVSP*GLWGLS
Trigger: AGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAA...AGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp GTGTCCTGGGTAGCAGGCACTAGTTCAGAGCCCCCTGGCAGCAGTACCTGCCTGTTGGCCCCACACTTCTaGGCATCCGCCTCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: VSWVAGTSSEPPGSSTCLLAPHF*ASASLR
Trigger: TCTTAAGGAGGCGGATGCCAAGAAGTGTGGGGCCAA...CAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAGTGCCTGCTACCCAGGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp GCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCTGCTCCTGGGCTTGCCTTCTTCTTCACTaGTGCCAGGCTGCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: AAHPLPAPYNNWVLCSWACLLLH*CQAAQP
Trigger: TGGCTGGGCAGCCTGGCACAAGTGAAGAAGAAGGCA...AGCCCAGGAGCAGAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS TCA 90 bp GTCCCTCCCCACGGAGTCTGGGCCACATTTGGTGGTGACGGACAGTaGGAGCTCCTCAGATGGTTTCGTGTGTTCCCATTTCACCTACGG +
Preference number: 5 (lower is better)
Translates to: VPPHGVWATFGGDGQ*ELLRWFRVFPFHLR
Trigger: CCGTAGGTGAAATGGGAACACACGAAACCATCTGAGGAGCTCTCACTGTCCGTCACCACCAAATGTGGCCCAGACTCCGTGGGGAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS GCA 90 bp GAGGCGGCGCCCGGTCACCAGCTCATAGGCCCCCAGCTTCTCCACTaGTTTGTAGATCTTCCACAGGTTAATCTGCTTGAAGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: EAAPGHQLIGPQLLH*FVDLPQVNLLEAEM
Trigger: CATCTCGGCTTCAAGCAGATTAACCTGTGGAAGATCTACAAAGCAGTGGAGAAGCTGGGGGCCTATGAGCTGGTGACCGGGCGCCGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000454558.2
ENST00000673792.1
CDS GCA 90 bp TGCAGGCTCACCCCAGGGATATGCAGTTTGGCAAGGACTGGGAGGTaGCTTCCTTACCAGCTCATAGGCCCCCAGCTTCTCCACTGCTTT +
Preference number: 5 (lower is better)
Translates to: CRLTPGICSLARTGR*LPYQLIGPQLLHCF
Trigger: AAAGCAGTGGAGAAGCTGGGGGCCTATGAGCTGGTAAGGAAGGCACCTCCCAGTCCTTGCCAAACTGCATATCCCTGGGGTGAGCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS-3UTR CAA 90 bp GGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGGCAGTGGGAGTTCTCCTTAGCCATCTaGTACTGTTTCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GFSVGNLGASSSALGQWEFSLAI*YCFLGL
Trigger: CAAGCCCAGGAAACAGTACAAGATGGCTAAGGAGAA...CTCCCACTGCCCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGCCGGACCCTGCAGGTTaGGCCCCACACTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGPDPAG*APHFLA
Trigger: TGCCAAGAAGTGTGGGGCCAAACCTGCAGGGTCCGG...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp CTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCCCGGACCCTGCAGGTTaGGCCCCACACTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LVSFYWIFRGQPGCFELRPDPAG*APHFLA
Trigger: TGCCAAGAAGTGTGGGGCCAAACCTGCAGGGTCCGG...GCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp CTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTGCTTGCCAGCAGGTTaGGGGGATGCAGGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: LVSFYWIFRGQPGCFELRCLPAG*GDAGGS
Trigger: AGACCCACCTGCATCCCCCAAACCTGCTGGCAAGCA...GCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCTCGGCTGGGACCTaGGCCATGGGGGACACCCAG +
Preference number: 5 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFELSAGT*AMGDTQ
Trigger: CTGGGTGTCCCCCATGGCCAAGGTCCCAGCCGAGAG...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp CACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCCCGGACCCTGCAGGTTaGGCCCCACACTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: HWCLFIGFSVGNLGASSSPDPAG*APHFLA
Trigger: TGCCAAGAAGTGTGGGGCCAAACCTGCAGGGTCCGG...GGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATGGGCTGGCCTACAGCTaGGTGTTGAGGTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHGLAYS*VLRWKK
Trigger: CTTCTTCCACCTCAACACCAAGCTGTAGGCCAGCCC...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp GCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACCATTGCCTTCTTCTTCACTaGTGCCAGGCTGCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: AVPACCRPLSTPQCTQHHCLLLH*CQAAQP
Trigger: TGGCTGGGCAGCCTGGCACAAGTGAAGAAGAAGGCA...ATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS GCA 90 bp GGGAGGTGCCTTCCTTACCAGCTCATAGGCCCCCAGCTTCTCCACTaGTTTGTAGATCTTCCACAGGTTAACTCCAGCGAGATGGGGTTC +
Preference number: 5 (lower is better)
Translates to: GRCLPYQLIGPQLLH*FVDLPQVNSSEMGF
Trigger: GAACCCCATCTCGCTGGAGTTAACCTGTGGAAGATCTACAAAGCAGTGGAGAAGCTGGGGGCCTATGAGCTGGTAAGGAAGGCACCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467498.5
ENST00000497920.1
CDS-3UTR CAA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGGAGGTGGGCAGCGGCTaGTCATCCTCCCCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFEEVGSG*SSSPFR
Trigger: CCTGAAGGGGGAGGATGACAAGCCGCTGCCCACCTC...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp CGTGTGTCCCCTTGCAGTAGAAGCTGGATAGGAGCCGCTTGTAGGCCTCAGGACTCAGCAGCATCTGCTTaGGTCTTTCCTGGCATCATC +
Preference number: 5 (lower is better)
Translates to: RVSPCSRSWIGAACRPQDSAASA*VFPGII
Trigger: GATGATGCCAGGAAAGACCAAAGCAGATGCTGCTGA...GTCCTGAGGCCTACAAGCGGCTCCTATCCAGCTTCTACTGCAAGGGGACACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412735.5
CDS-3UTR CAA 90 bp TGGATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCTCTCGGCTGGGACCTaGGCCATGGGGGACACCCAG +
Preference number: 5 (lower is better)
Translates to: WIHTGVFLLDFPWATWVLLSAGT*AMGDTQ
Trigger: CTGGGTGTCCCCCATGGCCAAGGTCCCAGCCGAGAG...AAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CAA 90 bp GGGGCAGTGGGAGCTGCCCATCCTCTCCCAGCGCCTTATAACAACTGGGTCCTCACTGGTGTCTTTTTATaGGATTTTCCGTGGGCAACC +
Preference number: 5 (lower is better)
Translates to: GAVGAAHPLPAPYNNWVLTGVFL*DFPWAT
Trigger: GGTTGCCCACGGAAAATCCAATAAAAAGACACCAGT...GAGGACCCAGTTGTTATAAGGCGCTGGGAGAGGATGGGCAGCTCCCACTGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS GCA 90 bp GGTTTCGTGTGTTCCCATTTCACCTACGGGGCAGAGGCTCAGAGGTaGCAGTTGACGTCTCTCAACTGTAGAAGCAGATTATCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GFVCSHFTYGAEAQR*QLTSLNCRSRLSEA
Trigger: GGCCTCCGATAATCTGCTTCTACAGTTGAGAGACGTCAACTGGCACCTCTGAGCCTCTGCCCCGTAGGTGAAATGGGAACACACGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CAA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGTGGATTCCGTTCTGCTaGCCAGCAGGTTTGGGGGAT +
Preference number: 5 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGWIPFC*PAGLGD
Trigger: ATCCCCCAAACCTGCTGGCAAGCAGAACGGAATCCA...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp TGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACTCAGCAGCATCTGCTTaGGTCTTTCCTGGCATCATC +
Preference number: 5 (lower is better)
Translates to: WQQYLPVVGPCRLHSVHNSAASA*VFPGII
Trigger: GATGATGCCAGGAAAGACCAAAGCAGATGCTGCTGA...GTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp CACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCTTCTCAGTCAGCCCTTaGGGGCTCTGGGGACTCTCT +
Preference number: 5 (lower is better)
Translates to: HWCLFIGFSVGNLGASSSFSVSP*GLWGLS
Trigger: AGAGAGTCCCCAGAGCCCCAAAGGGCTGACTGAGAA...GGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS GCA 90 bp GGGAGGTGCCTTCCTTACCAGCTCATAGGCCCCCAGCTTCTCCACTaGTTTGTAGATCTTCCACAGGTTAATCTGCTTGAAGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: GRCLPYQLIGPQLLH*FVDLPQVNLLEAEM
Trigger: CATCTCGGCTTCAAGCAGATTAACCTGTGGAAGATCTACAAAGCAGTGGAGAAGCTGGGGGCCTATGAGCTGGTAAGGAAGGCACCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470579.5
CDS-3UTR CAA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGTGCTTGCCAGCAGGTTaGGGGGATGCAGGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFECLPAG*GDAGGS
Trigger: AGACCCACCTGCATCCCCCAAACCTGCTGGCAAGCA...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp ACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCTTGGCCCCACACTTCTaGGCATCCGCCTCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: TLVSFYWIFRGQPGCFELLAPHF*ASASLR
Trigger: TCTTAAGGAGGCGGATGCCAAGAAGTGTGGGGCCAA...GAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp TGGCAGCAGTACCTGCCTGTTGTAGGCCCCTGTCGACTCCACAGTGTACACAACACTGGTGTCTTTTTATaGGATTTTCCGTGGGCAACC +
Preference number: 5 (lower is better)
Translates to: WQQYLPVVGPCRLHSVHNTGVFL*DFPWAT
Trigger: GGTTGCCCACGGAAAATCCAATAAAAAGACACCAGT...GTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp ATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGATCCTGTGCTCTAGCGTaGCCTGTAGGCGCAGTGACG +
Preference number: 5 (lower is better)
Translates to: IHTGVFLLDFPWATWVLRSCALA*PVGAVT
Trigger: CGTCACTGCGCCTACAGGCAACGCTAGAGCACAGGA...TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CAA 90 bp TGGATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTTCCCTAAGGCCTGGATaGGGCTCTGAGCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WIHTGVFLLDFPWATWVLSLRPG*GSELCC
Trigger: GCAGCAGAGCTCAGAGCCCAATCCAGGCCTTAGGGA...AAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CAA 90 bp TTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGGAGTCTGGGCCACATTaGGTGGTGACGGACAGTGAG +
Preference number: 5 (lower is better)
Translates to: FTLVSFYWIFRGQPGCFEESGPH*VVTDSE
Trigger: CTCACTGTCCGTCACCACCAAATGTGGCCCAGACTC...CTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CAA 90 bp ATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGATGCTTCCTGTTCCCTTaGACAGGGGCTGCGGGCTCT +
Preference number: 5 (lower is better)
Translates to: IHTGVFLLDFPWATWVLRCFLFP*TGAAGS
Trigger: AGAGCCCGCAGCCCCTGTCAAAGGGAACAGGAAGCA...TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS-3UTR CAA 90 bp TCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCGCTCTGGGTTCTCCTTAGCCATCTaGTACTGTTTCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SFYWIFRGQPGCFELRSGFSLAI*YCFLGL
Trigger: CAAGCCCAGGAAACAGTACAAGATGGCTAAGGAGAA...CCCAGAGCGGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp ATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGATGCCTTCTTCTTCACTaGTGCCAGGCTGCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: IHTGVFLLDFPWATWVLRCLLLH*CQAAQP
Trigger: TGGCTGGGCAGCCTGGCACAAGTGAAGAAGAAGGCA...TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CAA 90 bp ATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGATGGATTCCGTTCTGCTaGCCAGCAGGTTTGGGGGAT +
Preference number: 5 (lower is better)
Translates to: IHTGVFLLDFPWATWVLRWIPFC*PAGLGD
Trigger: ATCCCCCAAACCTGCTGGCAAGCAGAACGGAATCCA...TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CAA 90 bp ATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGACACAGGTTAATCTGCTaGAAGCCGAGATGGGGCACC +
Preference number: 5 (lower is better)
Translates to: IHTGVFLLDFPWATWVLRHRLIC*KPRWGT
Trigger: GGTGCCCCATCTCGGCTTCAAGCAGATTAACCTGTG...TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357485.8
ENST00000454558.2
CDS-3UTR CAA 90 bp CACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAGCTCCACTGGTGTCTTTTTATaGGATTTTCCGTGGGCAACC +
Preference number: 5 (lower is better)
Translates to: HWCLFIGFSVGNLGASSSTGVFL*DFPWAT
Trigger: GGTTGCCCACGGAAAATCCAATAAAAAGACACCAGT...GGAGCTCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000454558.2
CDS-3UTR CAA 90 bp ATTCACACTGGTGTCTTTTTATTGGATTTTCCGTGGGCAACCTGGGTGCTTCGAATCCTACAAAGCGCATaGAGCAAGTTCTTCACACCC +
Preference number: 5 (lower is better)
Translates to: IHTGVFLLDFPWATWVLRILQSA*SKFFTP
Trigger: GGGTGTGAAGAACTTGCTCAATGCGCTTTGTAGGAT...TCGAAGCACCCAGGTTGCCCACGGAAAATCCAATAAAAAGACACCAGTGTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CAA 90 bp CGGGCGACCCCTAGACACCGCGGAGGGACGGAGCGCGGGCCCGGGTaGGCCCGCAGCTCCCGCCGAGCGCGAAGCCGGGCATCGCCTGCA +
Preference number: 6 (lower is better)
Translates to: RATPRHRGGTERGPG*ARSSRRARSRASPA
Trigger: TGCAGGCGATGCCCGGCTTCGCGCTCGGCGGGAGCTGCGGGCCAACCCGGGCCCGCGCTCCGTCCCTCCGCGGTGTCTAGGGGTCGCCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS GCA 72 bp GCCGGGCATCGCCTGCAAGCTCGTAGCCCACGCTCTTaGCCTCTTCCCCTGACGCTCCCCAGCCGCCACCCC +
Preference number: 6 (lower is better)
Translates to: AGHRLQARSPRS*PLPLTLPSRHP
Trigger: GGGGTGGCGGCTGGGGAGCGTCAGGGGAAGAGGGCAAGAGCGTGGGCTACGAGCTTGCAGGCGATGCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS GCA 72 bp GCTCTAGCGTTGCCTGTAGGCGCAGTGACGCCACCGTaGGTGTGGGCTCCCACCAGAGGAGCCCGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: ALALPVGAVTPP*VWAPTRGARVG
Trigger: CCCCACCCGGGCTCCTCTGGTGGGAGCCCACACGCACGGTGGCGTCACTGCGCCTACAGGCAACGCTAGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CCA 72 bp GCGTTGCCTGTAGGCGCAGTGACGCCACCGTGCGTGTaGGCTCCCACCAGAGGAGCCCGGGTGGGGCAAGAG +
Preference number: 6 (lower is better)
Translates to: ALPVGAVTPPCV*APTRGARVGQE
Trigger: CTCTTGCCCCACCCGGGCTCCTCTGGTGGGAGCCCACACGCACGGTGGCGTCACTGCGCCTACAGGCAACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CAA 72 bp TCCGGCCGCCCTCGCAGGGACTCGAAGGACTGCAGTTaGGCAGCTGCTCTGCGGCTCCAGCAGCGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: SGRPRRDSKDCS*AAALRLQQRPA
Trigger: GGCTGGCCGCTGCTGGAGCCGCAGAGCAGCTGCCAAACTGCAGTCCTTCGAGTCCCTGCGAGGGCGGCCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS CAA 90 bp TGGCCCAAGACTCTGCAAACAAAGGGACACTGGACCCGCAGCGCCTaGGGACCCCCTGGGCCCTCGGGGGTCCTGCACCGCGCAAGCCCC +
Preference number: 6 (lower is better)
Translates to: WPKTLQTKGHWTRSA*GPPGPSGVLHRASP
Trigger: GGGGCTTGCGCGGTGCAGGACCCCCGAGGGCCCAGGGGGTCCCAAGGCGCTGCGGGTCCAGTGTCCCTTTGTTTGCAGAGTCTTGGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS GCA 72 bp GGGTCCCTAAGGCCTGGATTGGGCTCTGAGCTCTGCTaGGGGGTGAAGCCCTCGAGCCCCGACCTCCCACCC +
Preference number: 6 (lower is better)
Translates to: GSLRPGLGSELC*GVKPSSPDLPP
Trigger: GGGTGGGAGGTCGGGGCTCGAGGGCTTCACCCCGCAGCAGAGCTCAGAGCCCAATCCAGGCCTTAGGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS GCA 72 bp GGCGGGTCCCTAAGGCCTGGATTGGGCTCTGAGCTCTaGTGCGGGGTGAAGCCCTCGAGCCCCGACCTCCCA +
Preference number: 6 (lower is better)
Translates to: GGSLRPGLGSEL*CGVKPSSPDLP
Trigger: TGGGAGGTCGGGGCTCGAGGGCTTCACCCCGCAGCAGAGCTCAGAGCCCAATCCAGGCCTTAGGGACCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS GCA 72 bp TGCAGCTCCGGCCGCCCTCGCAGGGACTCGAAGGACTaGAGTTTGGCAGCTGCTCTGCGGCTCCAGCAGCGG +
Preference number: 6 (lower is better)
Translates to: CSSGRPRRDSKD*SLAAALRLQQR
Trigger: CCGCTGCTGGAGCCGCAGAGCAGCTGCCAAACTGCAGTCCTTCGAGTCCCTGCGAGGGCGGCCGGAGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS CCA 72 bp GCCCGGGTGGGGCAAGAGGCACCTGTTGTCCTCCCCTaGGGCCCGCGGAGCACTCCTTACTGGCCCAAGACT +
Preference number: 6 (lower is better)
Translates to: ARVGQEAPVVLP*GPRSTPYWPKT
Trigger: AGTCTTGGGCCAGTAAGGAGTGCTCCGCGGGCCCCAGGGGAGGACAACAGGTGCCTCTTGCCCCACCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CAA 72 bp CGAGCCCCGACCTCCCACCCCTCCTGTGCTCTAGCGTaGCCTGTAGGCGCAGTGACGCCACCGTGCGTGTGG +
Preference number: 6 (lower is better)
Translates to: RAPTSHPSCALA*PVGAVTPPCVW
Trigger: CCACACGCACGGTGGCGTCACTGCGCCTACAGGCAACGCTAGAGCACAGGAGGGGTGGGAGGTCGGGGCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CAA 90 bp CCTTGCAGCTCCGGCCGCCCTCGCAGGGACTCGAAGGACTGCAGTTaGGCAGCTGCTCTGCGGCTCCAGCAGCGGCCAGCCGATTCTCTC +
Preference number: 6 (lower is better)
Translates to: PCSSGRPRRDSKDCS*AAALRLQQRPADSL
Trigger: GAGAGAATCGGCTGGCCGCTGCTGGAGCCGCAGAGCAGCTGCCAAACTGCAGTCCTTCGAGTCCCTGCGAGGGCGGCCGGAGCTGCAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS GCA 72 bp GTGAAGCCCTCGAGCCCCGACCTCCCACCCCTCCTGTaGTCTAGCGTTGCCTGTAGGCGCAGTGACGCCACC +
Preference number: 6 (lower is better)
Translates to: VKPSSPDLPPLL*SSVACRRSDAT
Trigger: GGTGGCGTCACTGCGCCTACAGGCAACGCTAGAGCACAGGAGGGGTGGGAGGTCGGGGCTCGAGGGCTTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CAA 72 bp AGGGCGTCACCCTCCGTGGACTGCTTCCTGTTCCCTTaGACAGGGGCTGCCATGGCCCGGAGAGGTCCCGCG +
Preference number: 6 (lower is better)
Translates to: RASPSVDCFLFP*TGAAMARRGPA
Trigger: CGCGGGACCTCTCCGGGCCATGGCAGCCCCTGTCAAAGGGAACAGGAAGCAGTCCACGGAGGGTGACGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000467498.5
ENST00000470579.5
ENST00000673792.1
CDS GCA 72 bp GGGGCCCGCGGAGCACTCCTTACTGGCCCAAGACTCTaGAAACAAAGGGACACTGGACCCGCAGCGCCTTGG +
Preference number: 6 (lower is better)
Translates to: GARGALLTGPRL*KQRDTGPAAPW
Trigger: CCAAGGCGCTGCGGGTCCAGTGTCCCTTTGTTTGCAGAGTCTTGGGCCAGTAAGGAGTGCTCCGCGGGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS GCA 72 bp CCCTCGCAGGGACTCGAAGGACTGCAGTTTGGCAGCTaGTCTGCGGCTCCAGCAGCGGCCAGCCGATTCTCT +
Preference number: 6 (lower is better)
Translates to: PSQGLEGLQFGS*SAAPAAASRFS
Trigger: AGAGAATCGGCTGGCCGCTGCTGGAGCCGCAGAGCAGCTGCCAAACTGCAGTCCTTCGAGTCCCTGCGAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS CCA 72 bp CCTTACTGGCCCAAGACTCTGCAAACAAAGGGACACTaGACCCGCAGCGCCTTGGGACCCCCTGGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: PYWPKTLQTKGH*TRSALGPPGPS
Trigger: CGAGGGCCCAGGGGGTCCCAAGGCGCTGCGGGTCCAGTGTCCCTTTGTTTGCAGAGTCTTGGGCCAGTAAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS TCA 72 bp TGCATAGGTTGTGACTGGTGGTGCGTGCCAGGCAGATaGGGCCGGGCAAAGTCTGTGGCGGAGGGCACTGGG +
Preference number: 6 (lower is better)
Translates to: CIGCDWWCVPGR*GRAKSVAEGTG
Trigger: CCCAGTGCCCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACCAGTCACAACCTATGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673792.1
CDS GCA 72 bp GATGCAGGTGGGTCTAGGGCGTCACCCTCCGTGGACTaGTTCCTGTTCCCTTTGACAGGGGCTGCCATGGCC +
Preference number: 6 (lower is better)
Translates to: DAGGSRASPSVD*FLFPLTGAAMA
Trigger: GGCCATGGCAGCCCCTGTCAAAGGGAACAGGAAGCAGTCCACGGAGGGTGACGCCCTAGACCCACCTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357485.8
ENST00000412735.5
ENST00000467498.5
ENST00000470579.5
ENST00000673792.1
CDS GCA 72 bp GATGCAGGTGGGTCTAGGGCGTCACCCTCCGTGGACTaGTTCCTGTTCCCTTTGACAGGGGCTGCGGGCTCT +
Preference number: 6 (lower is better)
Translates to: DAGGSRASPSVD*FLFPLTGAAGS
Trigger: AGAGCCCGCAGCCCCTGTCAAAGGGAACAGGAAGCAGTCCACGGAGGGTGACGCCCTAGACCCACCTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CCA 72 bp GGCCAGCCGATTCTCTCTCCTAGGGCCATGGACTGCTaGCCCAAGCAGTTTTCCCAACACGGGGCGGGCAGA +
Preference number: 6 (lower is better)
Translates to: GQPILSPRAMDC*PKQFSQHGAGR
Trigger: TCTGCCCGCCCCGTGTTGGGAAAACTGCTTGGGCCAGCAGTCCATGGCCCTAGGAGAGAGAATCGGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS CCA 72 bp CCAGCAGCGGCCAGCCGATTCTCTCTCCTAGGGCCATaGACTGCTGGCCCAAGCAGTTTTCCCAACACGGGG +
Preference number: 6 (lower is better)
Translates to: PAAASRFSLLGP*TAGPSSFPNTG
Trigger: CCCCGTGTTGGGAAAACTGCTTGGGCCAGCAGTCCATGGCCCTAGGAGAGAGAATCGGCTGGCCGCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS TCA 72 bp GGGCGTCACCCTCCGTGGACTGCTTCCTGTTCCCTTTaGCAGGGGCTGCGGGCTCTGGGATGTCCTAAAAGC +
Preference number: 6 (lower is better)
Translates to: GRHPPWTASCSL*QGLRALGCPKS
Trigger: GCTTTTAGGACATCCCAGAGCCCGCAGCCCCTGTCAAAGGGAACAGGAAGCAGTCCACGGAGGGTGACGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS GCA 72 bp GATGCAGGTGGGTCTAGGGCGTCACCCTCCGTGGACTaGTTCCTGTTCCCTTTGACAGGGGCTGCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: DAGGSRASPSVD*FLFPLTGAAAR
Trigger: CCTTGCAGCAGCCCCTGTCAAAGGGAACAGGAAGCAGTCCACGGAGGGTGACGCCCTAGACCCACCTGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497920.1
CDS TCA 72 bp TCCCAACACGGGGCGGGCAGAACAGATGGGGAAGGCTaGAAAGCTGCTTTGAGCAGCAGAGTACCAGCGGGG +
Preference number: 6 (lower is better)
Translates to: SQHGAGRTDGEG*KAALSSRVPAG
Trigger: CCCCGCTGGTACTCTGCTGCTCAAAGCAGCTTTTCAGCCTTCCCCATCTGTTCTGCCCGCCCCGTGTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS GCA 72 bp CCTGGCTCTTCCTCTGTCCAGAGGCAAGGACAGCGCTaGAGGCTCACCCCAGGGATATGCAGTTTGGCAAGG +
Preference number: 6 (lower is better)
Translates to: PGSSSVQRQGQR*RLTPGICSLAR
Trigger: CCTTGCCAAACTGCATATCCCTGGGGTGAGCCTGCAGCGCTGTCCTTGCCTCTGGACAGAGGAAGAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS CAA 72 bp GGACAGCGCTGCAGGCTCACCCCAGGGATATGCAGTTaGGCAAGGACTGGGAGGTGCCTTCCTTACCAGCTC +
Preference number: 6 (lower is better)
Translates to: GQRCRLTPGICS*ARTGRCLPYQL
Trigger: GAGCTGGTAAGGAAGGCACCTCCCAGTCCTTGCCAAACTGCATATCCCTGGGGTGAGCCTGCAGCGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS CCA 72 bp CAGGCTCACCCCAGGGATATGCAGTTTGGCAAGGACTaGGAGGTGCCTTCCTTACCAGCTCATAGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: QAHPRDMQFGKD*EVPSLPAHRPP
Trigger: TGGGGGCCTATGAGCTGGTAAGGAAGGCACCTCCCAGTCCTTGCCAAACTGCATATCCCTGGGGTGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS CCA 72 bp GACAGCGCTGCAGGCTCACCCCAGGGATATGCAGTTTaGCAAGGACTGGGAGGTGCCTTCCTTACCAGCTCA +
Preference number: 6 (lower is better)
Translates to: DSAAGSPQGYAV*QGLGGAFLTSS
Trigger: TGAGCTGGTAAGGAAGGCACCTCCCAGTCCTTGCCAAACTGCATATCCCTGGGGTGAGCCTGCAGCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467498.5
ENST00000470579.5
ENST00000497920.1
CDS CAA 72 bp ATGGGACTGTCCCTCCCCACGGAGTCTGGGCCACATTaGGTGGTGACGGACAGTGAGAGCTCCTCAGATGGT +
Preference number: 6 (lower is better)
Translates to: MGLSLPTESGPH*VVTDSESSSDG
Trigger: ACCATCTGAGGAGCTCTCACTGTCCGTCACCACCAAATGTGGCCCAGACTCCGTGGGGAGGGACAGTCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS TCA 72 bp TGTCCCTCCCCACGGAGTCTGGGCCACATTTGGTGGTaGCGGACAGTGAGAGCTCCTCAGATGGTTTCGTGT +
Preference number: 6 (lower is better)
Translates to: CPSPRSLGHIWW*RTVRAPQMVSC
Trigger: ACACGAAACCATCTGAGGAGCTCTCACTGTCCGTCACCACCAAATGTGGCCCAGACTCCGTGGGGAGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CCA 72 bp GACCATCGGCGCAGCCCGCGGCCGAAAGAGGAACAGTaGATCCTACAAAGCGCATTGAGCAAGTTCTTCACA +
Preference number: 6 (lower is better)
Translates to: DHRRSPRPKEEQ*ILQSALSKFFT
Trigger: TGTGAAGAACTTGCTCAATGCGCTTTGTAGGATCCACTGTTCCTCTTTCGGCCGCGGGCTGCGCCGATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS TCA 72 bp GGCCGAAAGAGGAACAGTGGATCCTACAAAGCGCATTaGGCAAGTTCTTCACACCCGCGCAGCCCCTTTCAG +
Preference number: 6 (lower is better)
Translates to: GRKRNSGSYKAH*ASSSHPRSPFQ
Trigger: CTGAAAGGGGCTGCGCGGGTGTGAAGAACTTGCTCAATGCGCTTTGTAGGATCCACTGTTCCTCTTTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CAA 72 bp CGGCCGAAAGAGGAACAGTGGATCCTACAAAGCGCATaGAGCAAGTTCTTCACACCCGCGCAGCCCCTTTCA +
Preference number: 6 (lower is better)
Translates to: RPKEEQWILQSA*SKFFTPAQPLS
Trigger: TGAAAGGGGCTGCGCGGGTGTGAAGAACTTGCTCAATGCGCTTTGTAGGATCCACTGTTCCTCTTTCGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS CAA 90 bp GTGTGTTCCCATTTCACCTACGGGGCAGAGGCTCAGAGGTGCCAGTaGACGTCTCTCAACTGTAGAAGCAGATTATCGGAGGCCCTTTCT +
Preference number: 6 (lower is better)
Translates to: VCSHFTYGAEAQRCQ*TSLNCRSRLSEALS
Trigger: AGAAAGGGCCTCCGATAATCTGCTTCTACAGTTGAGAGACGTCAACTGGCACCTCTGAGCCTCTGCCCCGTAGGTGAAATGGGAACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2
CDS GCA 72 bp TGTTCCCATTTCACCTACGGGGCAGAGGCTCAGAGGTaGCAGTTGACGTCTCTCAACTGTAGAAGCAGATTA +
Preference number: 6 (lower is better)
Translates to: CSHFTYGAEAQR*QLTSLNCRSRL
Trigger: TAATCTGCTTCTACAGTTGAGAGACGTCAACTGGCACCTCTGAGCCTCTGCCCCGTAGGTGAAATGGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454558.2