RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARID4B (Homo sapiens)

Ensembl gene IDs: ENSG00000054267

Ensembl transcript IDs: ENST00000264183.9, ENST00000349213.7, ENST00000366603.6, ENST00000418304.1, ENST00000421364.5, ENST00000444620.2, ENST00000462969.1, ENST00000466653.1, ENST00000471257.5, ENST00000474401.1, ENST00000474953.5, ENST00000491632.5, ENST00000494543.1

Found 706 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACCGGTGCCACCTCTGGAATGGTGTTCGCCGCGAAATAAGCTACTaGCGACCTGTCCAAGCCTGTAGTCTTCCGGCGGACTCCCGCGAA +
Preference number: 1 (lower is better)
Translates to: DRCHLWNGVRREISY*RPVQACSLPADSRE
Trigger: TTCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCTTATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR CCA 90 bp AGAGAACTGAAGAGGGACGCCAGCCGACCGGTGCCACCTCTGGAATaGTGTTCGCCGCGAAATAAGCTACTGGCGACCTGTCCAAGCCTG +
Preference number: 1 (lower is better)
Translates to: RELKRDASRPVPPLE*CSPRNKLLATCPSL
Trigger: CAGGCTTGGACAGGTCGCCAGTAGCTTATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR TCA 90 bp CTCAGCAGAACCTCGGGGAGCTGGCCGAATAACCCTTTTCTGCACTaGAGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAG +
Preference number: 1 (lower is better)
Translates to: LSRTSGSWPNNPFLH*SAAKPAASKGQAVE
Trigger: CTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACTTCAGTGCAGAAAAGGGTTATTCGGCCAGCTCCCCGAGGTTCTGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR GCA 90 bp ATGGGCTCAGCAGAACCTCGGGGAGCTGGCCGAATAACCCTTTTCTaGACTGAAGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAG +
Preference number: 1 (lower is better)
Translates to: MGSAEPRGAGRITLF*TEVQPSRLLAKVRQ
Trigger: CTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACTTCAGTGCAGAAAAGGGTTATTCGGCCAGCTCCCCGAGGTTCTGCTGAGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR GCA 90 bp AGTGGCCCTCAACAGCCATTAAGTGCAAAGTGCTTTAGCAAGTCCTaGTGTCACCTGCACTCAACTGACATTCCATTTTGTGATGCGCTG +
Preference number: 1 (lower is better)
Translates to: SGPQQPLSAKCFSKS*CHLHSTDIPFCDAL
Trigger: CAGCGCATCACAAAATGGAATGTCAGTTGAGTGCAGGTGACAGCAGGACTTGCTAAAGCACTTTGCACTTAATGGCTGTTGAGGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR CCA 90 bp TTCCTTGAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTaGAGACTGCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCAT +
Preference number: 1 (lower is better)
Translates to: FLEIRILITILSTFS*RLRPCGRFGTMRLH
Trigger: ATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR TCA 90 bp GAAAACTCCATTTGTAAACTTTGGGTAATCGATTACTGGGTTCCTTaGGATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTGGAG +
Preference number: 1 (lower is better)
Translates to: ENSICKLWVIDYWVP*DQDPYHHSFHIFLE
Trigger: CTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAACCCAGTAATCGATTACCCAAAGTTTACAAATGGAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR CCA 90 bp AGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTaGAAACAATTATTGCTTGAGGAAAAGCAGTTCATTGTACTTTTT +
Preference number: 1 (lower is better)
Translates to: SGRPSSYQTHNSQTS*KQLLLEEKQFIVLF
Trigger: AAAAAGTACAATGAACTGCTTTTCCTCAAGCAATAATTGTTTCCAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR CCA 90 bp GCCTGGAAGTCATATGGGCTCAGCAGAACCTCGGGGAGCTGGCCGAATAACCCTGCAAAGGTCAGGCAGTaGAGGTGGCAGGAGTCTCCT +
Preference number: 2 (lower is better)
Translates to: AWKSYGLSRTSGSWPNNPAKVRQ*RWQESP
Trigger: AGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGC...AGGGTTATTCGGCCAGCTCCCCGAGGTTCTGCTGAGCCCATATGACTTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR TCA 90 bp ATTGCTGCCAACTTTTTGGATAGCGTTCCCTCTGCTGGAATCAGAGAACGAAATGGGGCTCCAGAGAACTaGAGAGGGACGCCAGCCGAC +
Preference number: 2 (lower is better)
Translates to: IAANFLDSVPSAGIRERNGAPEN*RGTPAD
Trigger: GTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCC...ATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR-3UTR TCA 90 bp CGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTGCGTGGCAGCAGGCACGTACACGGGTTaGATCTGGGGCTCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: RNPSAIWAPFLFNACVAAGTYTG*IWGSRE
Trigger: TTCTCTGGAGCCCCAGATTCAACCCGTGTACGTGCC...TGCTGCCACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR-3UTR CCA 90 bp GCAAGTCCTGCTGTCACCTGCACTCAACTGACATTCCATTTTGTGATGCGCTGGAGAACCTCGGGGAGCTaGCCGAATAACCCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: ASPAVTCTQLTFHFVMRWRTSGS*PNNPFL
Trigger: CAGAAAAGGGTTATTCGGCCAGCTCCCCGAGGTTCT...CCAGCGCATCACAAAATGGAATGTCAGTTGAGTGCAGGTGACAGCAGGACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATGTCTCTACAGGCAGTaGAAAGCCTCCATTTGCCAC +
Preference number: 2 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTCLYRQ*KASICH
Trigger: GTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACTCCATTTGCCACAGTaGAAGGCCTTCCAGTTACCA +
Preference number: 2 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTLHLPQ*KAFQLP
Trigger: TGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR CCA 90 bp GCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTGGAAACTGATTCGCCTGGAAGTCATATaGGCTCAGCAGAACCTCGGG +
Preference number: 2 (lower is better)
Translates to: ASLREIWYYETSFQWKLIRLEVI*AQQNLG
Trigger: CCCGAGGTTCTGCTGAGCCCATATGACTTCCAGGCG...AATCAGTTTCCACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACAATTTGAAGGGCCATaGAAAGCCACTGCAAGACCT +
Preference number: 2 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRQFEGP*KATARP
Trigger: AGGTCTTGCAGTGGCTTTTCATGGCCCTTCAAATTG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
3UTR-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAACTACTATTTGCGCCTaGAAGTCATATGGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTTTICA*KSYGLS
Trigger: GCTGAGCCCATATGACTTCCAGGCGCAAATAGTAGT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTCTCTACAGGCAGTaGAAAGCCTCCATTTGCCAC +
Preference number: 2 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSCLYRQ*KASICH
Trigger: GTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAATTTGAAGGGCCATaGAAAGCCACTGCAAGACCT +
Preference number: 2 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFQFEGP*KATARP
Trigger: AGGTCTTGCAGTGGCTTTTCATGGCCCTTCAAATTG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
3UTR-3UTR GCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGGAGACTGCGTCCTTaGGGGAGATTTGGTACTATG +
Preference number: 2 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSWRLRP*GRFGTM
Trigger: CATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCTCCATTTGCCACAGTaGAAGGCCTTCCAGTTACCA +
Preference number: 2 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSLHLPQ*KAFQLP
Trigger: TGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGCTGTTATGGAACTaGATGAAGGTGAAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFQLLWN*MKVKRR
Trigger: CCTCCTCTTCACCTTCATCCAGTTCCATAACAGCTG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCAATTTGAAGGGCCATaGAAAGCCACTGCAAGACCT +
Preference number: 2 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSQFEGP*KATARP
Trigger: AGGTCTTGCAGTGGCTTTTCATGGCCCTTCAAATTG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
3UTR-3UTR TCA 90 bp TACTTTCACCAGCTGAAAGTTCTTCACTATCACTACTATTTGCGCCTGGAAGTCAACCCTTTTCTGCACTaGAGTGCAGCCAAGCCGGCT +
Preference number: 2 (lower is better)
Translates to: YFHQLKVLHYHYYLRLEVNPFLH*SAAKPA
Trigger: AGCCGGCTTGGCTGCACTTCAGTGCAGAAAAGGGTT...GACTTCCAGGCGCAAATAGTAGTGATAGTGAAGAACTTTCAGCTGGTGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR GCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAAAAAGTGCACTTAAGTaGCAAGTCAGCTTGTCAAGA +
Preference number: 2 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTKSALK*QVSLSR
Trigger: TCTTGACAAGCTGACTTGGCACTTAAGTGCACTTTT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAAAAAGTGCACTTAAGTaGCAAGTCAGCTTGTCAAGA +
Preference number: 2 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRKSALK*QVSLSR
Trigger: TCTTGACAAGCTGACTTGGCACTTAAGTGCACTTTT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR GCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCACTATCACTACTATTTaGGCCTGGAAGTCATATGGG +
Preference number: 2 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFTITTI*AWKSYG
Trigger: CCCATATGACTTCCAGGCGCAAATAGTAGTGATAGT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR CAA 90 bp GATCCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTaGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTGGAAACTG +
Preference number: 2 (lower is better)
Translates to: DPYHHSFHIFLETAS*REIWYYETSFQWKL
Trigger: CAGTTTCCACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR GCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGAAAAGTGCACTTAAGTaGCAAGTCAGCTTGTCAAGA +
Preference number: 2 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLKSALK*QVSLSR
Trigger: TCTTGACAAGCTGACTTGGCACTTAAGTGCACTTTT...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR GCA 90 bp CAGCTGAAAGTTCTTCACTATCACTACTATTTGCGCCTGGAAGTCATATGGGCTCGAATAACCCTTTTCTaGACTGAAGTGCAGCCAAGC +
Preference number: 2 (lower is better)
Translates to: QLKVLHYHYYLRLEVIWARITLF*TEVQPS
Trigger: GCTTGGCTGCACTTCAGTGCAGAAAAGGGTTATTCG...AGCCCATATGACTTCCAGGCGCAAATAGTAGTGATAGTGAAGAACTTTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR CCA 90 bp GTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCGTGACCGGTGCCACCTCTaGAATGGTGTTCGCCGCGAA +
Preference number: 2 (lower is better)
Translates to: VLEVKLSPCLGLLTFFNRDRCHL*NGVRRE
Trigger: TTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTC...ACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR-3UTR GCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTAAAAGTGCACTTAAGTaGCAAGTCAGCTTGTCAAGA +
Preference number: 2 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSKSALK*QVSLSR
Trigger: TCTTGACAAGCTGACTTGGCACTTAAGTGCACTTTT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCAATTCCCAGACAAGTTaGAAACAATTATTGCTTGAG +
Preference number: 2 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFNSQTS*KQLLLE
Trigger: CTCAAGCAATAATTGTTTCCAACTTGTCTGGGAATT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR CCA 90 bp CTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTGCGTGAGTGGTCTTTCAATCTaGGATGTACTTTCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: LIRNPSAIWAPFLFNACVSGLSI*DVLSSS
Trigger: GGAGGAAGAAAGTACATCCCAGATTGAAAGACCACT...CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTAATTCCCAGACAAGTTaGAAACAATTATTGCTTGAG +
Preference number: 2 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSNSQTS*KQLLLE
Trigger: CTCAAGCAATAATTGTTTCCAACTTGTCTGGGAATT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR CCA 90 bp TTAAGGAGAACAGCTTTTTCTCCAATAAATAAGCTTTTAGGATGTCCTTCTGCACGCGAAATAAGCTACTaGCGACCTGTCCAAGCCTGT +
Preference number: 2 (lower is better)
Translates to: LRRTAFSPINKLLGCPSAREISY*RPVQAC
Trigger: ACAGGCTTGGACAGGTCGCCAGTAGCTTATTTCGCG...TGCAGAAGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGTTCTCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR-3UTR TCA 90 bp TGCGTTCGGCACTTGTCATATTTTCCAGGTCCGACATCTGAAAACTCCATTTGTACTGATTTGACTGGCTaGCTCTTAGTTATACTTTCA +
Preference number: 2 (lower is better)
Translates to: CVRHLSYFPGPTSENSICTDLTG*LLVILS
Trigger: TGAAAGTATAACTAAGAGTCAGCCAGTCAAATCAGT...ACAAATGGAGTTTTCAGATGTCGGACCTGGAAAATATGACAAGTGCCGAACGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR TCA 90 bp GCAGTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATTCTCTTGTCTCTAGATaGGGTCTCAGATGCGAGATC +
Preference number: 2 (lower is better)
Translates to: AVLEVKLSPCLGLLTFFNSLVSR*GLRCEI
Trigger: GATCTCGCATCTGAGACCTCATCTAGAGACAAGAGA...ATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR-3UTR GCA 90 bp TGCAGTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCTTTCTCTTCCGTTTaGTCATCCCTTCCAAGGCCA +
Preference number: 2 (lower is better)
Translates to: CSFGSKIKSLLRFTDILQSFSSV*SSLPRP
Trigger: TGGCCTTGGAAGGGATGAGCAAACGGAAGAGAAAGA...TTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR-3UTR GCA 90 bp TTGTCTCTAGATGAGGTCTCAGATGCGAGATCAACTCTAATACGAAATCCATCTTTTTTGGCAGGTTCTTaGGAAAGTGGTCTTTCAATC +
Preference number: 2 (lower is better)
Translates to: LSLDEVSDARSTLIRNPSFLAGS*ESGLSI
Trigger: GATTGAAAGACCACTTTCGCAAGAACCTGCCAAAAA...AGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR-3UTR CCA 90 bp CTGACATTCCATTTTGTGATGCGCTGGACATTGACGGTTCAGCTAAAGTTAACATTCTCCTCCGATCAATaGAAGCTACTTCAGATTTTA +
Preference number: 2 (lower is better)
Translates to: LTFHFVMRWTLTVQLKLTFSSDQ*KLLQIL
Trigger: TAAAATCTGAAGTAGCTTCCATTGATCGGAGGAGAA...TGTTAACTTTAGCTGAACCGTCAATGTCCAGCGCATCACAAAATGGAATGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR TCA 90 bp CGATTACTGGGTTCCTTGAGATCAGGATCCTTATCACCATTCTTTCCACATTTTTATACTTTCACCAGCTaGAAGTTCTTCACTATCACT +
Preference number: 2 (lower is better)
Translates to: RLLGSLRSGSLSPFFPHFYTFTS*KFFTIT
Trigger: AGTGATAGTGAAGAACTTTCAGCTGGTGAAAGTATA...AAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR TCA 90 bp ATCAACTCTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTTTCTTTCTTTGACTaGCAACTGTGTCTTCTGTGT +
Preference number: 2 (lower is better)
Translates to: INSNTKSICNLGPISFQCFSFFD*QLCLLC
Trigger: ACACAGAAGACACAGTTGTCAGTCAAAGAAAGAAAA...GCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR-3UTR GCA 90 bp GCAGTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATAATACGAAATCCATCTaGAATCTGGGCCCCATTTCT +
Preference number: 2 (lower is better)
Translates to: AVLEVKLSPCLGLLTFFNNTKSI*NLGPIS
Trigger: AGAAATGGGGCCCAGATTGCAGATGGATTTCGTATT...ATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR-3UTR CCA 90 bp TTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCGTGGAAATCCATCTGCAATCTaGGCCCCATTTCTTTTCAAT +
Preference number: 2 (lower is better)
Translates to: LEVKLSPCLGLLTFFNRGNPSAI*APFLFN
Trigger: ATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATT...TCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR TCA 72 bp GCACGTACACGGGTTGAATCTGGGGCTCCAGAGAACTaGAGAGGGACGCCAGCCGACCGGTGCCACCTCTGG +
Preference number: 3 (lower is better)
Translates to: ARTRVESGAPEN*RGTPADRCHLW
Trigger: CCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAGATTCAACCCGTGTACGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR CCA 72 bp GTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTaGAGGTGGCAGGAGTCTCCTGGAAGAGCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: VQPSRLLAKVRQ*RWQESPGRAAG
Trigger: TCCTGCTGCTCTTCCAGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR CCA 72 bp AAGAGGGACGCCAGCCGACCGGTGCCACCTCTGGAATaGTGTTCGCCGCGAAATAAGCTACTGGCGACCTGT +
Preference number: 3 (lower is better)
Translates to: KRDASRPVPPLE*CSPRNKLLATC
Trigger: ACAGGTCGCCAGTAGCTTATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR TCA 72 bp ACCTCGGGGAGCTGGCCGAATAACCCTTTTCTGCACTaGAGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAG +
Preference number: 3 (lower is better)
Translates to: TSGSWPNNPFLH*SAAKPAASKGQ
Trigger: CTGACCTTTGCTAGCAGCCGGCTTGGCTGCACTTCAGTGCAGAAAAGGGTTATTCGGCCAGCTCCCCGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR GCA 72 bp GCAGAACCTCGGGGAGCTGGCCGAATAACCCTTTTCTaGACTGAAGTGCAGCCAAGCCGGCTGCTAGCAAAG +
Preference number: 3 (lower is better)
Translates to: AEPRGAGRITLF*TEVQPSRLLAK
Trigger: CTTTGCTAGCAGCCGGCTTGGCTGCACTTCAGTGCAGAAAAGGGTTATTCGGCCAGCTCCCCGAGGTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR CCA 72 bp CACCTCTGGAATGGTGTTCGCCGCGAAATAAGCTACTaGCGACCTGTCCAAGCCTGTAGTCTTCCGGCGGAC +
Preference number: 3 (lower is better)
Translates to: HLWNGVRREISY*RPVQACSLPAD
Trigger: GTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCTTATTTCGCGGCGAACACCATTCCAGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAGTGAAAAGCCTCCATTaGCCACAGTGGAAGGCCTTC +
Preference number: 3 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRVKSLH*PQWKAF
Trigger: GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCAC...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTGTGAAAAGCCTCCATTaGCCACAGTGGAAGGCCTTC +
Preference number: 3 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSVKSLH*PQWKAF
Trigger: GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCAC...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR CAA 90 bp CTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTGCGTGAGGCACGTACACGGGTaGAATCTGGGGCTCCAGAGA +
Preference number: 3 (lower is better)
Translates to: LIRNPSAIWAPFLFNACVRHVHG*NLGLQR
Trigger: TCTCTGGAGCCCCAGATTCAACCCGTGTACGTGCCT...CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR CCA 72 bp TCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTaGAAGGCCTTCCAGTTACCAGACACACAATTCCCA +
Preference number: 3 (lower is better)
Translates to: SLQAVKSLHLPQ*KAFQLPDTQFP
Trigger: TGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCGATTACTGGGTTCCTaGAGATCAGGATCCTTATCA +
Preference number: 3 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFRLLGS*RSGSLS
Trigger: TGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAACTATGCTTACTGTATaGTCTCTACAGGCAGTGAAA +
Preference number: 3 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTTMLTV*SLQAVK
Trigger: TTTCACTGCCTGTAGAGACAATACAGTAAGCATAGT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAAGTTGGAAACAATTATaGCTTGAGGAAAAGCAGTTC +
Preference number: 3 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRSWKQL*LEEKQF
Trigger: GAACTGCTTTTCCTCAAGCAATAATTGTTTCCAACT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCACTATGCTTACTGTATaGTCTCTACAGGCAGTGAAA +
Preference number: 3 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFTMLTV*SLQAVK
Trigger: TTTCACTGCCTGTAGAGACAATACAGTAAGCATAGT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
3UTR GCA 72 bp ACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTTaGGGGAGATTTGGTACTATGAGACTTCATTCCAGT +
Preference number: 3 (lower is better)
Translates to: TILSTFSWRLRP*GRFGTMRLHSS
Trigger: ACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR CCA 72 bp ATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTaGAGACTGCGTCCTTGCGGGAGATTTGGTACTATG +
Preference number: 3 (lower is better)
Translates to: IRILITILSTFS*RLRPCGRFGTM
Trigger: CATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR GCA 72 bp CAACAGCCATTAAGTGCAAAGTGCTTTAGCAAGTCCTaGTGTCACCTGCACTCAACTGACATTCCATTTTGT +
Preference number: 3 (lower is better)
Translates to: QQPLSAKCFSKS*CHLHSTDIPFC
Trigger: ACAAAATGGAATGTCAGTTGAGTGCAGGTGACAGCAGGACTTGCTAAAGCACTTTGCACTTAATGGCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR GCA 72 bp CTCAGATGCGAGATCAACTCTAATACGAAATCCATCTaGAATCTGGGCCCCATTTCTTTTCAATGCTTGCGT +
Preference number: 3 (lower is better)
Translates to: LRCEINSNTKSI*NLGPISFQCLR
Trigger: ACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR-3UTR CAA 90 bp ATTGCTGCCAACTTTTTGGATAGCGTTCCCTCTGCTGGAATCAGAGAACGAAATTTCGCTTTCACTTTTTaGGCAGGTTCTTGCGAAAGT +
Preference number: 3 (lower is better)
Translates to: IAANFLDSVPSAGIRERNFAFTF*AGSCES
Trigger: ACTTTCGCAAGAACCTGCCAAAAAAGTGAAAGCGAA...ATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR CCA 72 bp TTTTTGGCAGGTTCTTGCGAAAGTGGTCTTTCAATCTaGGATGTACTTTCTTCCTCCTCATTCCGTTTCGTT +
Preference number: 3 (lower is better)
Translates to: FLAGSCESGLSI*DVLSSSSFRFV
Trigger: AACGAAACGGAATGAGGAGGAAGAAAGTACATCCCAGATTGAAAGACCACTTTCGCAAGAACCTGCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR TCA 72 bp TTTGACTGGCTGACTCTTAGTTATACTTTCACCAGCTaGAAGTTCTTCACTATCACTACTATTTGCGCCTGG +
Preference number: 3 (lower is better)
Translates to: FDWLTLSYTFTS*KFFTITTICAW
Trigger: CCAGGCGCAAATAGTAGTGATAGTGAAGAACTTTCAGCTGGTGAAAGTATAACTAAGAGTCAGCCAGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR TCA 72 bp AGATTTGGTACTATGAGACTTCATTCCAGTGGAAACTaGTTTGACTGGCTGACTCTTAGTTATACTTTCACC +
Preference number: 3 (lower is better)
Translates to: RFGTMRLHSSGN*FDWLTLSYTFT
Trigger: GGTGAAAGTATAACTAAGAGTCAGCCAGTCAAATCAGTTTCCACTGGAATGAAGTCTCATAGTACCAAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR TCA 72 bp ATTTGTAAACTTTGGGTAATCGATTACTGGGTTCCTTaGGATCAGGATCCTTATCACCATTCTTTCCACATT +
Preference number: 3 (lower is better)
Translates to: ICKLWVIDYWVP*DQDPYHHSFHI
Trigger: AATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAACCCAGTAATCGATTACCCAAAGTTTACAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
3UTR CCA 72 bp TCTCTTTCTTCTTTAAACGCTTTCTCCTCCGATCAATaGAAGCTACTTCAGATTTTAATGACAGATAATGTT +
Preference number: 3 (lower is better)
Translates to: SLSSLNAFSSDQ*KLLQILMTDNV
Trigger: AACATTATCTGTCATTAAAATCTGAAGTAGCTTCCATTGATCGGAGGAGAAAGCGTTTAAAGAAGAAAGAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp CTGAAGAGGGACGCCAGCCGACCGGTGCCACCTCTGGAATGGTGTTCGCCGCGAGGCGAAGGGAGGCGCTaGGTGAGGGAGCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LKRDASRPVPPLEWCSPRGEGRR*VREQVC
Trigger: ACAAACCTGCTCCCTCACCCAGCGCCTCCCTTCGCC...TCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAGGGTCCAGCGGCTGCTaGGGCAGAGGCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRGSSGC*GRGSGS
Trigger: GGAGCCGGAGCCTCTGCCTCAGCAGCCGCTGGACCC...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR GCA 90 bp CCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTCCTGGAAACACCAGGTTCAGCTaGACCTTCCTCGGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: PSRLLAKVRQWRWQESPGNTRFS*TFLGGE
Trigger: CTCGCCTCCGAGGAAGGTGCAGCTGAACCTGGTGTT...TCCAGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp CTGAAGAGGGACGCCAGCCGACCGGTGCCACCTCTGGAATGGTGTTCGCCGCGACGCGAAATAAGCTACTaGCGACCTGTCCAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LKRDASRPVPPLEWCSPRREISY*RPVQAC
Trigger: ACAGGCTTGGACAGGTCGCCAGTAGCTTATTTCGCG...TCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGGCCCCCAATCGCGCTaGCCTCCAGAGGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFGPQSR*PPEDGG
Trigger: GCCGCCGTCCTCTGGAGGGCAGCGCGATTGGGGGCC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR GCA 90 bp CCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTCCTGGATCTTCAGCCACAGTCTaGAGTGACTCCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: PSRLLAKVRQWRWQESPGSSATV*SDSSAT
Trigger: GGTGGCAGAGGAGTCACTGCAGACTGTGGCTGAAGA...TCCAGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAGGCCCGGGGGAGAGATaGGGAAGAAGGGCGGCGGGT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRGPGER*GRRAAG
Trigger: ACCCGCCGCCCTTCTTCCCCATCTCTCCCCCGGGCC...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR TCA 90 bp CGCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTCTCTTCCGTTTGCAGCCACAGTCTGCAGTaGCTCCTCTGCCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: RRRQDSLPPGHFSFSSVCSHSLQ*LLCHPL
Trigger: GAGGGGGTGGCAGAGGAGTCACTGCAGACTGTGGCT...GCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACTCGGGCTCCCTGGTTaGGGGGAGGGGGACGACGAA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTLGLPG*GEGDDE
Trigger: TTCGTCGTCCCCCTCCCCCCAACCAGGGAGCCCGAG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATGCCACCCCCTCCTCTaGGGCAGGATGCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTCHPLL*GRMRWG
Trigger: TCCCCACCGCATCCTGCCCCAGAGGAGGGGGTGGCA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GCCTGGAAGTCATATGGGCTCAGCAGAACCTCGGGGAGCTGGCCGAATAACCCTCGCCTGGAAGTCATATaGGCTCAGCAGAACCTCGGG +
Preference number: 4 (lower is better)
Translates to: AWKSYGLSRTSGSWPNNPRLEVI*AQQNLG
Trigger: CCCGAGGTTCTGCTGAGCCCATATGACTTCCAGGCG...AGGGTTATTCGGCCAGCTCCCCGAGGTTCTGCTGAGCCCATATGACTTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACGGCGATGGACCCTCTaGAGCTCCCTCCGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTRRWTL*SSLRAK
Trigger: CTTTGCCCGGAGGGAGCTGCAGAGGGTCCATCGCCG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR GCA 90 bp CTGAAGAGGGACGCCAGCCGACCGGTGCCACCTCTGGAATGGTGTTCGCCGCGACATAGCCAAACCCTTTaGCGATGCCTGTCATTTTGT +
Preference number: 4 (lower is better)
Translates to: LKRDASRPVPPLEWCSPRHSQTL*RCLSFC
Trigger: ACAAAATGACAGGCATCGGCAAAGGGTTTGGCTATG...TCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAAAGGTCCAGGCGGTaGCCGTGGCGGCGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTQRSRR*PWRRQD
Trigger: ATCTTGCCGCCGCCACGGCCACCGCCTGGACCTTTG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAAGAGGACGGCGGCGATaGACCCTCTGCAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTRGRRR*TLCSSL
Trigger: GAGGGAGCTGCAGAGGGTCCATCGCCGCCGTCCTCT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCTCGGGCTCCCTGGTTaGGGGGAGGGGGACGACGAA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFLGLPG*GEGDDE
Trigger: TTCGTCGTCCCCCTCCCCCCAACCAGGGAGCCCGAG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATCCCGCGGCGGCGACTaGTACCTTTGTTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRSRGGD*YLCLAA
Trigger: GGCCGCCAAACAAAGGTACCAGTCGCCGCCGCGGGA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATCCCGCGGCGGCGACTaGTACCTTTGTTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSRGGD*YLCLAA
Trigger: GGCCGCCAAACAAAGGTACCAGTCGCCGCCGCGGGA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTGGCCCGGGGGAGAGATaGGGAAGAAGGGCGGCGGGT +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSGPGER*GRRAAG
Trigger: ACCCGCCGCCCTTCTTCCCCATCTCTCCCCCGGGCC...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTGCCACCCCCTCCTCTaGGGCAGGATGCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLCHPLL*GRMRWG
Trigger: TCCCCACCGCATCCTGCCCCAGAGGAGGGGGTGGCA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATGGGTCCAGCGGCTGCTaGGGCAGAGGCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHGSSGC*GRGSGS
Trigger: GGAGCCGGAGCCTCTGCCTCAGCAGCCGCTGGACCC...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264183.9
ENST00000349213.7
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAAGCCACAGTCTGCAGTaGCTCCTCTGCCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSHSLQ*LLCHPL
Trigger: GAGGGGGTGGCAGAGGAGTCACTGCAGACTGTGGCT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATGGCCCCCAATCGCGCTaGCCTCCAGAGGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHGPQSR*PPEDGG
Trigger: GCCGCCGTCCTCTGGAGGGCAGCGCGATTGGGGGCC...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264183.9
ENST00000349213.7
CDS-3UTR GCA 90 bp CCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTCCTGGAGCACTTGGACTTTCATaGCTGGTGGATAGCACTCAA +
Preference number: 4 (lower is better)
Translates to: PSRLLAKVRQWRWQESPGALGLS*LVDSTQ
Trigger: TTGAGTGCTATCCACCAGGCATGAAAGTCCAAGTGC...TCCAGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp GACGCCAGCCGACCGGTGCCACCTCTGGAATGGTGTTCGCCGCGAAATAAGCTAACTGTTACAGAAGACTaGTGCCGGCTGCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: DASRPVPPLEWCSPRNKLTVTED*CRLPSV
Trigger: AACAGAAGGCAGCCGGCAGCAGTCTTCTGTAACAGT...TAGCTTATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp GACGCCAGCCGACCGGTGCCACCTCTGGAATGGTGTTCGCCGCGAAATAAGCTAACTGGCATCAAAACCTaGTGGCGAGCTATTCCCTTC +
Preference number: 4 (lower is better)
Translates to: DASRPVPPLEWCSPRNKLTGIKT*WRAIPF
Trigger: GAAGGGAATAGCTCGCCAGCAGGTTTTGATGCCAGT...TAGCTTATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCAAAGGTCCAGGCGGTaGCCGTGGCGGCGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLQRSRR*PWRRQD
Trigger: ATCTTGCCGCCGCCACGGCCACCGCCTGGACCTTTG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CCA 90 bp CCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTTGCGGGAGATTCTCGGGCTCCCTGGTTaGGGGGAGGGGGACGACGAA +
Preference number: 4 (lower is better)
Translates to: PYHHSFHIFLETASLREILGLPG*GEGDDE
Trigger: TTCGTCGTCCCCCTCCCCCCAACCAGGGAGCCCGAG...AATCTCCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTCCCGCGGCGGCGACTaGTACCTTTGTTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFSRGGD*YLCLAA
Trigger: GGCCGCCAAACAAAGGTACCAGTCGCCGCCGCGGGA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CCA 90 bp CCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTCCTGGATGGATTTGTCTGAAATaGTGGTTTGGACAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: PSRLLAKVRQWRWQESPGWICLK*WFGQAP
Trigger: CGGCGCTTGTCCAAACCACCATTTCAGACAAATCCA...TCCAGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCCACCCCCTCCTCTaGGGCAGGATGCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSCHPLL*GRMRWG
Trigger: TCCCCACCGCATCCTGCCCCAGAGGAGGGGGTGGCA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GACGCCAGCCGACCGGTGCCACCTCTGGAATGGTGTTCGCCGCGAAATAAGCTAGGCATCAAAACCTGCTaGCGAGCTATTCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: DASRPVPPLEWCSPRNKLGIKTC*RAIPFR
Trigger: TCTGAAGGGAATAGCTCGCCAGCAGGTTTTGATGCC...TAGCTTATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp CCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTCCTGGACAGCTGTTATGGAACTaGATGAAGGTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSRLLAKVRQWRWQESPGQLLWN*MKVKRR
Trigger: CCTCCTCTTCACCTTCATCCAGTTCCATAACAGCTG...TCCAGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp GTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTACTACTATTTGCGCCTaGAAGTCATATGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VQPSRLLAKVRQWRWQESTTICA*KSYGLS
Trigger: GCTGAGCCCATATGACTTCCAGGCGCAAATAGTAGT...AGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAGTGGCGGCGGCAAGATaGAGCTCAAGAGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTVAAAR*SSRVSL
Trigger: GAGGGAGACTCTTGAGCTTCATCTTGCCGCCGCCAC...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAGTGGCGGCGGCAAGATaGAGCTCAAGAGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRVAAAR*SSRVSL
Trigger: GAGGGAGACTCTTGAGCTTCATCTTGCCGCCGCCAC...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCTCGGAGGCGAGATCTaGCCCTGGCACGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLLGGEI*PWHVQS
Trigger: ACTCTGGACGTGCCAGGGTCAGATCTCGCCTCCGAG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR TCA 90 bp CCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTCCTGGACTGTCCCTGAATACTTaGCCAGACATCTTTTCGATC +
Preference number: 4 (lower is better)
Translates to: PSRLLAKVRQWRWQESPGLSLNT*PDIFSI
Trigger: GATCGAAAAGATGTCTGGTCAAGTATTCAGGGACAG...TCCAGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCAGCCACAGTCTGCAGTaGCTCCTCTGCCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFSHSLQ*LLCHPL
Trigger: GAGGGGGTGGCAGAGGAGTCACTGCAGACTGTGGCT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACACTCCGGACTCGACTaGCGGGCAAACATCGCTTCC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTHSGLD*RANIAS
Trigger: GGAAGCGATGTTTGCCCGTCAGTCGAGTCCGGAGTG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349213.7
CDS-3UTR GCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCGGCGATGGACCCTCTaGAGCTCCCTCCGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSRRWTL*SSLRAK
Trigger: CTTTGCCCGGAGGGAGCTGCAGAGGGTCCATCGCCG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR GCA 90 bp CCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTCCTGGAGCCTGTTCAAAGGCTTaGTTTAAAACAGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: PSRLLAKVRQWRWQESPGACSKA*FKTASG
Trigger: GCCTGATGCTGTTTTAAAGCAAGCCTTTGAACAGGC...TCCAGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCAAAGGTCCAGGCGGTaGCCGTGGCGGCGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSQRSRR*PWRRQD
Trigger: ATCTTGCCGCCGCCACGGCCACCGCCTGGACCTTTG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAACTGGTACCTTTGTTTaGCGGCCGCTCGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRTGTFV*RPLGLP
Trigger: AGGGAGCCCGAGCGGCCGCCAAACAAAGGTACCAGT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTGGGGCAGGATGCGGTaGGGAAGCTGCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFWGRMR*GSCSLS
Trigger: ACTGAGGCTGCAGCTTCCCCACCGCATCCTGCCCCA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp AGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTTATTATCCATGTCTTaGGCACCTCTCTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: SAAKPAASKGQAVEVAGVLLSMS*APLSSS
Trigger: GGAAGATGAGAGAGGTGCTCAAGACATGGATAATAA...GACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp GAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTCGGCGATGGACCCTCTaGAGCTCCCTCCGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: EIRILITILSTFSWRLRPRRWTL*SSLRAK
Trigger: CTTTGCCCGGAGGGAGCTGCAGAGGGTCCATCGCCG...AGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAAACACCAGGTTCAGCTaGACCTTCCTCGGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRNTRFS*TFLGGE
Trigger: CTCGCCTCCGAGGAAGGTGCAGCTGAACCTGGTGTT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR GCA 90 bp GTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTAGCATCAGGCTTTGGTaGAGTGTCACTAGTAATTTC +
Preference number: 4 (lower is better)
Translates to: VQPSRLLAKVRQWRWQESSIRLW*SVTSNF
Trigger: GAAATTACTAGTGACACTGCACCAAAGCCTGATGCT...AGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp GCCTGGAAGTCATATGGGCTCAGCAGAACCTCGGGGAGCTGGCCGAATAACCCTCTGGCTGATTACTACTaGTTGAGCTCACACTGGCAT +
Preference number: 4 (lower is better)
Translates to: AWKSYGLSRTSGSWPNNPLADYY*LSSHWH
Trigger: ATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAG...AGGGTTATTCGGCCAGCTCCCCGAGGTTCTGCTGAGCCCATATGACTTCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGACTGGTACCTTTGTTTaGCGGCCGCTCGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLTGTFV*RPLGLP
Trigger: AGGGAGCCCGAGCGGCCGCCAAACAAAGGTACCAGT...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CCA 90 bp AGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTTGGTGAGTGGGAGCTaGTCTAATGTTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: SAAKPAASKGQAVEVAGVLVSGS*SNVSLS
Trigger: TGAAAGTGAAACATTAGACCAGCTCCCACTCACCAA...GACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp AGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCCCTCATCTTCATCACTaGAGGATGATGAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: SAAKPAASKGQAVEVAGVPHLHH*RMMKTL
Trigger: AAGAGTCTTCATCATCCTCCAGTGATGAAGATGAGG...GACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAGTGGCAGGAGTCTCCTaGAAGAGCAGCAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTVAGVS*KSSRRS
Trigger: TGACCTCCTGCTGCTCTTCCAGGAGACTCCTGCCAC...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp AGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCGAACTTTCAGAAGCTTaGAGTCCATTAAGGATCGAA +
Preference number: 4 (lower is better)
Translates to: SAAKPAASKGQAVEVAGVELSEA*SPLRIE
Trigger: TTCGATCCTTAATGGACTTCAAGCTTCTGAAAGTTC...GACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAATGCGGTGGGGAAGCTaGAGCCTCAGTATCAGAGTC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTMRWGS*SLSIRV
Trigger: GACTCTGATACTGAGGCTGCAGCTTCCCCACCGCAT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATCTTCAGCCACAGTCTaGAGTGACTCCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSSATV*SDSSAT
Trigger: GGTGGCAGAGGAGTCACTGCAGACTGTGGCTGAAGA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATCTTCAGCCACAGTCTaGAGTGACTCCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRSSATV*SDSSAT
Trigger: GGTGGCAGAGGAGTCACTGCAGACTGTGGCTGAAGA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATAGAGGACGGCGGCGATaGACCCTCTGCAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHRGRRR*TLCSSL
Trigger: GAGGGAGCTGCAGAGGGTCCATCGCCGCCGTCCTCT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264183.9
ENST00000349213.7
CDS-3UTR CCA 90 bp GCCTGGAAGTCATATGGGCTCAGCAGAACCTCGGGGAGCTGGCCGAATAACCCTCATTTTGTGATGCGCTaGACATTGACGGTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: AWKSYGLSRTSGSWPNNPHFVMR*TLTVQL
Trigger: TAGCTGAACCGTCAATGTCCAGCGCATCACAAAATG...AGGGTTATTCGGCCAGCTCCCCGAGGTTCTGCTGAGCCCATATGACTTCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGTCTCTAGATGAGGTCTCAGATGCGAGATCAACTCTAATACGAAATCCATCTGGCACTTCCGCTCTCTaGCCACGCCCCCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSLDEVSDARSTLIRNPSGTSAL*PRPLPS
Trigger: GGAGGGGAGGGGGCGTGGCCAGAGAGCGGAAGTGCC...AGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR CAA 72 bp TTTGATGGTTTGTTTAGGCACAGGCACGTACACGGGTaGAATCTGGGGCTCCAGAGAACTGAAGAGGGACGC +
Preference number: 4 (lower is better)
Translates to: FDGLFRHRHVHG*NLGLQRTEEGR
Trigger: GCGTCCCTCTTCAGTTCTCTGGAGCCCCAGATTCAACCCGTGTACGTGCCTGTGCCTAAACAAACCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCTCGGAGGCGAGATCTaGCCCTGGCACGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLGGEI*PWHVQS
Trigger: ACTCTGGACGTGCCAGGGTCAGATCTCGCCTCCGAG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264183.9
ENST00000349213.7
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAAATGCTCAGGGTTGGTaGGTGGGAGCTGGTCTAATG +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRNAQGW*VGAGLM
Trigger: CATTAGACCAGCTCCCACTCACCAACCCTGAGCATT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp AGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTCTTCCTCTGGTATATaGTTAGATCTTCTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SAAKPAASKGQAVEVAGVSSSGI*LDLLPL
Trigger: TAGAGGAAGAAGATCTAATCATATACCAGAGGAAGA...GACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp CCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTCCTGGAAAATTCAATGTTGGCTaGTCTACAGTACTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: PSRLLAKVRQWRWQESPGKFNVG*STVLLK
Trigger: TTTGAGGAGTACTGTAGATCAGCCAACATTGAATTT...TCCAGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp GACGCCAGCCGACCGGTGCCACCTCTGGAATGGTGTTCGCCGCGAAATAAGCTAGAACTTTCAGAAGCTTaGAGTCCATTAAGGATCGAA +
Preference number: 4 (lower is better)
Translates to: DASRPVPPLEWCSPRNKLELSEA*SPLRIE
Trigger: TTCGATCCTTAATGGACTTCAAGCTTCTGAAAGTTC...TAGCTTATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp AGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCCTGTTGTTGGTCAAATaGTCAATCTTAGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: SAAKPAASKGQAVEVAGVLLLVK*SILDSS
Trigger: AGAGGAATCTAAGATTGATCATTTGACCAACAACAG...GACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATAGCCACAGTCTGCAGTaGCTCCTCTGCCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHSHSLQ*LLCHPL
Trigger: GAGGGGGTGGCAGAGGAGTCACTGCAGACTGTGGCT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp AGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCACTGATTTGACTGGCTaGCTCTTAGTTATACTTTCA +
Preference number: 4 (lower is better)
Translates to: SAAKPAASKGQAVEVAGVTDLTG*LLVILS
Trigger: TGAAAGTATAACTAAGAGTCAGCCAGTCAAATCAGT...GACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTAACACCAGGTTCAGCTaGACCTTCCTCGGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSNTRFS*TFLGGE
Trigger: CTCGCCTCCGAGGAAGGTGCAGCTGAACCTGGTGTT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR GCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGATGCGGTGGGGAAGCTaGAGCCTCAGTATCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLMRWGS*SLSIRV
Trigger: GACTCTGATACTGAGGCTGCAGCTTCCCCACCGCAT...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GCCTGGAAGTCATATGGGCTCAGCAGAACCTCGGGGAGCTGGCCGAATAACCCTACTATCACTACTATTTaGGCCTGGAAGTCATATGGG +
Preference number: 4 (lower is better)
Translates to: AWKSYGLSRTSGSWPNNPTITTI*AWKSYG
Trigger: CCCATATGACTTCCAGGCGCAAATAGTAGTGATAGT...AGGGTTATTCGGCCAGCTCCCCGAGGTTCTGCTGAGCCCATATGACTTCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACGTCCATACCGCACTTaGACTTTCATGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTRPYRT*TFMPGG
Trigger: TCCACCAGGCATGAAAGTCCAAGTGCGGTATGGACG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp TGCGTTCGGCACTTGTCATATTTTCCAGGTCCGACATCTGAAAACTCCATTTGTTGGGGCAGGATGCGGTaGGGAAGCTGCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: CVRHLSYFPGPTSENSICWGRMR*GSCSLS
Trigger: ACTGAGGCTGCAGCTTCCCCACCGCATCCTGCCCCA...ACAAATGGAGTTTTCAGATGTCGGACCTGGAAAATATGACAAGTGCCGAACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGTCTCTAGATGAGGTCTCAGATGCGAGATCAACTCTAATACGAAATCCATCTTGCCACCCCCTCCTCTaGGGCAGGATGCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LSLDEVSDARSTLIRNPSCHPLL*GRMRWG
Trigger: TCCCCACCGCATCCTGCCCCAGAGGAGGGGGTGGCA...AGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATGCTTGAGCTCACACTaGCATCAAAACCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRCLSSH*HQNLLA
Trigger: CGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATGCTTGAGCTCACACTaGCATCAAAACCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTCLSSH*HQNLLA
Trigger: CGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAAGTCCTGCTGTCACCTGCACTCAACTGACATTCCATTTTGTGATGCGCTGGTGCTTGAGCTCACACTaGCATCAAAACCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: ASPAVTCTQLTFHFVMRWCLSSH*HQNLLA
Trigger: CGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCA...CCAGCGCATCACAAAATGGAATGTCAGTTGAGTGCAGGTGACAGCAGGACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACTTTCCACATTTTCCTaGAGACTGCGTCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTLSTFS*RLRPCG
Trigger: CCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACTCAGACCCGACAAGTaGGAGCGAGATCAACATCTG +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRLRPDK*ERDQHL
Trigger: CAGATGTTGATCTCGCTCCCACTTGTCGGGTCTGAG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366603.6
CDS-3UTR TCA 90 bp CTGACATTCCATTTTGTGATGCGCTGGACATTGACGGTTCAGCTAAAGTTAACACTCGGAGGCGAGATCTaGCCCTGGCACGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: LTFHFVMRWTLTVQLKLTLGGEI*PWHVQS
Trigger: ACTCTGGACGTGCCAGGGTCAGATCTCGCCTCCGAG...TGTTAACTTTAGCTGAACCGTCAATGTCCAGCGCATCACAAAATGGAATGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATGTCTCTACAGGCAGTaGAAAGCCTCCATTTGCCAC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRCLYRQ*KASICH
Trigger: GTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAGTTACAGAAGACTGCTaGCGGCTGCCTTCTGTTACA +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRVTEDC*RLPSVT
Trigger: TGTAACAGAAGGCAGCCGGCAGCAGTCTTCTGTAAC...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAACTGTTACAGAAGACTaGTGCCGGCTGCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTTVTED*CRLPSV
Trigger: AACAGAAGGCAGCCGGCAGCAGTCTTCTGTAACAGT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GCAAGTCCTGCTGTCACCTGCACTCAACTGACATTCCATTTTGTGATGCGCTGGACTGTTACAGAAGACTaGTGCCGGCTGCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: ASPAVTCTQLTFHFVMRWTVTED*CRLPSV
Trigger: AACAGAAGGCAGCCGGCAGCAGTCTTCTGTAACAGT...CCAGCGCATCACAAAATGGAATGTCAGTTGAGTGCAGGTGACAGCAGGACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAACTGGCATCAAAACCTaGTGGCGAGCTATTCCCTTC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTTGIKT*WRAIPF
Trigger: GAAGGGAATAGCTCGCCAGCAGGTTTTGATGCCAGT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATGGAGACTGCGTCCTTaGGGGAGATTTGGTACTATG +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRWRLRP*GRFGTM
Trigger: CATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTCTCTTCCGTTTGCTTCTTTCTCTTCCGTTTaGTCATCCCTTCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: AVVRILSLLDTSLSLPFASFSSV*SSLPRP
Trigger: TGGCCTTGGAAGGGATGAGCAAACGGAAGAGAAAGA...AGCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATACTGGTACCTTTGTTTaGCGGCCGCTCGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHTGTFV*RPLGLP
Trigger: AGGGAGCCCGAGCGGCCGCCAAACAAAGGTACCAGT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264183.9
ENST00000349213.7
CDS-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCGTCCATACCGCACTTaGACTTTCATGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFRPYRT*TFMPGG
Trigger: TCCACCAGGCATGAAAGTCCAAGTGCGGTATGGACG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCTATTCCCTTCAGACTaGAGGTCTTGGAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLLFPSD*RSWSSP
Trigger: TGGGGAGCTCCAAGACCTCCAGTCTGAAGGGAATAG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAGGCATCAAAACCTGCTaGCGAGCTATTCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTGIKTC*RAIPFR
Trigger: TCTGAAGGGAATAGCTCGCCAGCAGGTTTTGATGCC...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTGCTTGAGCTCACACTaGCATCAAAACCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLCLSSH*HQNLLA
Trigger: CGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp CTGACATTCCATTTTGTGATGCGCTGGACATTGACGGTTCAGCTAAAGTTAACAGTGGCGGCGGCAAGATaGAGCTCAAGAGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LTFHFVMRWTLTVQLKLTVAAAR*SSRVSL
Trigger: GAGGGAGACTCTTGAGCTTCATCTTGCCGCCGCCAC...TGTTAACTTTAGCTGAACCGTCAATGTCCAGCGCATCACAAAATGGAATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTAATGCTCAGGGTTGGTaGGTGGGAGCTGGTCTAATG +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSNAQGW*VGAGLM
Trigger: CATTAGACCAGCTCCCACTCACCAACCCTGAGCATT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp CGATTACTGGGTTCCTTGAGATCAGGATCCTTATCACCATTCTTTCCACATTTTAGCCACAGTCTGCAGTaGCTCCTCTGCCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: RLLGSLRSGSLSPFFPHFSHSLQ*LLCHPL
Trigger: GAGGGGGTGGCAGAGGAGTCACTGCAGACTGTGGCT...AAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp GCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTCTCTTCCGTTTGCTGATTACTGGGTTCCTTaGGATCAGGATCCTTATCAC +
Preference number: 4 (lower is better)
Translates to: AVVRILSLLDTSLSLPFADYWVP*DQDPYH
Trigger: GTGATAAGGATCCTGATCTCAAGGAACCCAGTAATC...AGCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTGTCTCTACAGGCAGTaGAAAGCCTCCATTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLCLYRQ*KASICH
Trigger: GTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTCCCGTCTACGACAATaGCGCCATTTCTGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLSRLRQ*RHFCQR
Trigger: TCTCTGACAGAAATGGCGTCATTGTCGTAGACGGGA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366603.6
CDS-3UTR TCA 90 bp GAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTAACCCTTTTCTGCACTaGAGTGCAGCCAAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: EIRILITILSTFSWRLRPNPFLH*SAAKPA
Trigger: AGCCGGCTTGGCTGCACTTCAGTGCAGAAAAGGGTT...AGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTACTGGAGTGCCAAAATaGTCAGGGTTGGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSTGVPK*SGLVSG
Trigger: CCCACTCACCAACCCTGAGCATTTTGGCACTCCAGT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACTCCTCTTCTTCCTCTaGTTCACTGCTAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRLLFFL*FTARAI
Trigger: GATAGCTCTAGCAGTGAAGCAGAGGAAGAAGAGGAG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGTTACAGAAGACTGCTaGCGGCTGCCTTCTGTTACA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFVTEDC*RLPSVT
Trigger: TGTAACAGAAGGCAGCCGGCAGCAGTCTTCTGTAAC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCACTGTTACAGAAGACTaGTGCCGGCTGCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFTVTED*CRLPSV
Trigger: AACAGAAGGCAGCCGGCAGCAGTCTTCTGTAACAGT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCACTGGCATCAAAACCTaGTGGCGAGCTATTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFTGIKT*WRAIPF
Trigger: GAAGGGAATAGCTCGCCAGCAGGTTTTGATGCCAGT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGACTGGCATCAAAACCTaGTGGCGAGCTATTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLTGIKT*WRAIPF
Trigger: GAAGGGAATAGCTCGCCAGCAGGTTTTGATGCCAGT...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACTGGCTGATTACTACTaGTTGAGCTCACACTGGCAT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRLADYY*LSSHWH
Trigger: ATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCATTTTCCTGGAGACTaGGTCCTTGCGGGAGATTTG +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFHFPGD*VLAGDL
Trigger: CAAATCTCCCGCAAGGACGCAGTCTCCAGGAAAATG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCATTTTCCTGGAGACTaGGTCCTTGCGGGAGATTTG +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLHFPGD*VLAGDL
Trigger: CAAATCTCCCGCAAGGACGCAGTCTCCAGGAAAATG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp TCAACTCTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTCAAAGACTCCCAGACTaGAGCTGCGCGCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: STLIRNPSAIWAPFLFNAQRLPD*SCAPAR
Trigger: GCGAGCTGGCGCGCAGCTGCAGTCTGGGAGTCTTTG...AGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAGACTTTCATGCCTGGTaGATAGCACTCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRDFHAW*IALKLL
Trigger: GAGGAGTTTGAGTGCTATCCACCAGGCATGAAAGTC...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAAGTCCTGCTGTCACCTGCACTCAACTGACATTCCATTTTGTGATGCGCTGGGACTTTCATGCCTGGTaGATAGCACTCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: ASPAVTCTQLTFHFVMRWDFHAW*IALKLL
Trigger: GAGGAGTTTGAGTGCTATCCACCAGGCATGAAAGTC...CCAGCGCATCACAAAATGGAATGTCAGTTGAGTGCAGGTGACAGCAGGACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATGGATTTGTCTGAAATaGTGGTTTGGACAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTWICLK*WFGQAP
Trigger: CGGCGCTTGTCCAAACCACCATTTCAGACAAATCCA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACTTCGAACCTCTTCTTaGTTTGGAGCCAGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRLRTSS*FGASGS
Trigger: AGAACCACTGGCTCCAAACCAAGAAGAGGTTCGAAG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGGGCATCAAAACCTGCTaGCGAGCTATTCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLGIKTC*RAIPFR
Trigger: TCTGAAGGGAATAGCTCGCCAGCAGGTTTTGATGCC...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GGACTCCCGCGAACGCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTTTTTTCAGGATGTTCTaGTTCTGGCTGATTACTACT +
Preference number: 4 (lower is better)
Translates to: GLPRTPSSGFSPSWTLLFFFRMF*FWLITT
Trigger: AGTAGTAATCAGCCAGAACCAGAACATCCTGAAAAA...AAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCC
50% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCTTTCCACATTTTCCTaGAGACTGCGTCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSLSTFS*RLRPCG
Trigger: CCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAGCTGTTATGGAACTaGATGAAGGTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTQLLWN*MKVKRR
Trigger: CCTCCTCTTCACCTTCATCCAGTTCCATAACAGCTG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCTCCATTTGCCACAGTaGAAGGCCTTCCAGTTACCA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFLHLPQ*KAFQLP
Trigger: TGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCTCCATTTGCCACAGTaGAAGGCCTTCCAGTTACCA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLLHLPQ*KAFQLP
Trigger: TGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp TCCTGGAGACTGCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTCTCCATTTGCCACAGTaGAAGGCCTTCCAGTTACCA +
Preference number: 4 (lower is better)
Translates to: SWRLRPCGRFGTMRLHSSLHLPQ*KAFQLP
Trigger: TGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAG...ACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp TGCGTTCGGCACTTGTCATATTTTCCAGGTCCGACATCTGAAAACTCCATTTGTGCAAAGGTCAGGCAGTaGAGGTGGCAGGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CVRHLSYFPGPTSENSICAKVRQ*RWQESP
Trigger: AGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGC...ACAAATGGAGTTTTCAGATGTCGGACCTGGAAAATATGACAAGTGCCGAACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAGGAGATGGATTTGTCTaGAATGGTGGTTTGGACAAG +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRGDGFV*NGGLDK
Trigger: CTTGTCCAAACCACCATTTCAGACAAATCCATCTCC...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAGGAGATGGATTTGTCTaGAATGGTGGTTTGGACAAG +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTGDGFV*NGGLDK
Trigger: CTTGTCCAAACCACCATTTCAGACAAATCCATCTCC...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACTGTCCCTGAATACTTaGCCAGACATCTTTTCGATC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTLSLNT*PDIFSI
Trigger: GATCGAAAAGATGTCTGGTCAAGTATTCAGGGACAG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp CGCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTCTCTTCCGTTTGCGTTTACTATCGACATTaGCTGGAGGTGGTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: RRRQDSLPPGHFSFSSVCVYYRH*LEVVFL
Trigger: TAGAAAAACCACCTCCAGTCAATGTCGATAGTAAAC...GCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTGCCTTCTGTTACAGTaGCTGATGAAGGCGATTCAG +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFCLLLQ*LMKAIQ
Trigger: CTGAATCGCCTTCATCAGTCACTGTAACAGAAGGCA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTGCCTTCTGTTACAGTaGCTGATGAAGGCGATTCAG +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLCLLLQ*LMKAIQ
Trigger: CTGAATCGCCTTCATCAGTCACTGTAACAGAAGGCA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TCCTGGAGACTGCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTTGCCTTCTGTTACAGTaGCTGATGAAGGCGATTCAG +
Preference number: 4 (lower is better)
Translates to: SWRLRPCGRFGTMRLHSSCLLLQ*LMKAIQ
Trigger: CTGAATCGCCTTCATCAGTCACTGTAACAGAAGGCA...ACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp CGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTGCGTGGCAGCATGCCTTCTGTTACAGTaGCTGATGAAGGCGATTCAG +
Preference number: 4 (lower is better)
Translates to: RNPSAIWAPFLFNACVAACLLLQ*LMKAIQ
Trigger: CTGAATCGCCTTCATCAGTCACTGTAACAGAAGGCA...TGCTGCCACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACTGATTACTACTGCTTaGGCTCACACTGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRLITTA*AHTGIK
Trigger: TTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTGTTCTGGTTCTGGCTaGTTACTACTGCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFCSGSG*LLLLEL
Trigger: GAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTGTTCTGGTTCTGGCTaGTTACTACTGCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLCSGSG*LLLLEL
Trigger: GAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAGATTACTGGGTTCCTTaGGATCAGGATCCTTATCAC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRDYWVP*DQDPYH
Trigger: GTGATAAGGATCCTGATCTCAAGGAACCCAGTAATC...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCAATTTGAAGGGCCATaGAAAGCCACTGCAAGACCT +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLQFEGP*KATARP
Trigger: AGGTCTTGCAGTGGCTTTTCATGGCCCTTCAAATTG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp GCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTGGAAACTGATTACTGGAGTGCCAAAATaGTCAGGGTTGGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ASLREIWYYETSFQWKLITGVPK*SGLVSG
Trigger: CCCACTCACCAACCCTGAGCATTTTGGCACTCCAGT...AATCAGTTTCCACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAGCCTGTTCAAAGGCTTaGTTTAAAACAGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTACSKA*FKTASG
Trigger: GCCTGATGCTGTTTTAAAGCAAGCCTTTGAACAGGC...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCTCCTCTTCTTCCTCTaGTTCACTGCTAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLLLFFL*FTARAI
Trigger: GATAGCTCTAGCAGTGAAGCAGAGGAAGAAGAGGAG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCTCCTCTTCTTCCTCTaGTTCACTGCTAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFLLFFL*FTARAI
Trigger: GATAGCTCTAGCAGTGAAGCAGAGGAAGAAGAGGAG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp TCCTGGAGACTGCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTCTCCTCTTCTTCCTCTaGTTCACTGCTAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: SWRLRPCGRFGTMRLHSSLLFFL*FTARAI
Trigger: GATAGCTCTAGCAGTGAAGCAGAGGAAGAAGAGGAG...ACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGGCACTTGGACTTTCATaGCTGGTGGATAGCACTCAA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLALGLS*LVDSTQ
Trigger: TTGAGTGCTATCCACCAGGCATGAAAGTCCAAGTGC...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATATGCGGTGGGGAAGCTaGAGCCTCAGTATCAGAGTC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHMRWGS*SLSIRV
Trigger: GACTCTGATACTGAGGCTGCAGCTTCCCCACCGCAT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTCTTCAGCCACAGTCTaGAGTGACTCCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHSSATV*SDSSAT
Trigger: GGTGGCAGAGGAGTCACTGCAGACTGTGGCTGAAGA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCTGGCTGATTACTACTaGTTGAGCTCACACTGGCAT +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLLADYY*LSSHWH
Trigger: ATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCATTTTCCTGGAGACTaGGTCCTTGCGGGAGATTTG +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSHFPGD*VLAGDL
Trigger: CAAATCTCCCGCAAGGACGCAGTCTCCAGGAAAATG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp TCCTGGAGACTGCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTCGAATAACCCTTTTCTaGACTGAAGTGCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SWRLRPCGRFGTMRLHSSRITLF*TEVQPS
Trigger: GCTTGGCTGCACTTCAGTGCAGAAAAGGGTTATTCG...ACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGACTTTCATGCCTGGTaGATAGCACTCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFDFHAW*IALKLL
Trigger: GAGGAGTTTGAGTGCTATCCACCAGGCATGAAAGTC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAATTTGTCTGAAATGGTaGTTTGGACAAGCGCCGAAG +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRICLKW*FGQAPK
Trigger: CTTCGGCGCTTGTCCAAACCACCATTTCAGACAAAT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTGGCATCAAAACCTGCTaGCGAGCTATTCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSGIKTC*RAIPFR
Trigger: TCTGAAGGGAATAGCTCGCCAGCAGGTTTTGATGCC...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GGACTCCCGCGAACGCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTTCCATTTGTAAACTTTaGGTAATCGATTACTGGGTT +
Preference number: 4 (lower is better)
Translates to: GLPRTPSSGFSPSWTLLFSICKL*VIDYWV
Trigger: AACCCAGTAATCGATTACCCAAAGTTTACAAATGGA...AAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCAGCTGTTATGGAACTaGATGAAGGTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLQLLWN*MKVKRR
Trigger: CCTCCTCTTCACCTTCATCCAGTTCCATAACAGCTG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACATTTTGTGATGCGCTaGACATTGACGGTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRHFVMR*TLTVQL
Trigger: TAGCTGAACCGTCAATGTCCAGCGCATCACAAAATG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp CAGCTGAAAGTTCTTCACTATCACTACTATTTGCGCCTGGAAGTCATATGGGCTAGCAGGAGGTCAGTGTaGGGCACTGCCTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: QLKVLHYHYYLRLEVIWASRRSV*GTAFSL
Trigger: AAGGGAAAAGGCAGTGCCCCACACTGACCTCCTGCT...AGCCCATATGACTTCCAGGCGCAAATAGTAGTGATAGTGAAGAACTTTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAGTCTTTTTGCTGTCTTaGTCTTGGCTTCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRVFLLS*SWLHKR
Trigger: CCTTTTGTGAAGCCAAGATCAAGACAGCAAAAAGAC...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAGTCTTTTTGCTGTCTTaGTCTTGGCTTCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTVFLLS*SWLHKR
Trigger: CCTTTTGTGAAGCCAAGATCAAGACAGCAAAAAGAC...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATCTGGCAATGCCATCTaGAATTCAATGTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSGNAI*NSMLAD
Trigger: ATCAGCCAACATTGAATTTCAGATGGCATTGCCAGA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATCTGGCAATGCCATCTaGAATTCAATGTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRSGNAI*NSMLAD
Trigger: ATCAGCCAACATTGAATTTCAGATGGCATTGCCAGA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAAGTTTTTGGCATCAGTaGGATCCAGTTTGGATACCA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSFWHQ*DPVWIP
Trigger: TGGTATCCAAACTGGATCTCACTGATGCCAAAAACT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATTATTATCCATGTCTTaGGCACCTCTCTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTLLSMS*APLSSS
Trigger: GGAAGATGAGAGAGGTGCTCAAGACATGGATAATAA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp CGCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTCTCTTCCGTTTGCCTGTTGTTGGTCAAATaGTCAATCTTAGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: RRRQDSLPPGHFSFSSVCLLLVK*SILDSS
Trigger: AGAGGAATCTAAGATTGATCATTTGACCAACAACAG...GCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATTGGCCCTGCTGTTTTaGAGTCTTTCATCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTLALLF*SLSSEL
Trigger: TAACTCTGATGAAAGACTTCAAAACAGCAGGGCCAA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCTGTCCCTGAATACTTaGCCAGACATCTTTTCGATC +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFLSLNT*PDIFSI
Trigger: GATCGAAAAGATGTCTGGTCAAGTATTCAGGGACAG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCTGATTACTACTGCTTaGGCTCACACTGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLLITTA*AHTGIK
Trigger: TTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCTGATTACTACTGCTTaGGCTCACACTGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFLITTA*AHTGIK
Trigger: TTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTTCTGGTTCTGGCTaGTTACTACTGCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSCSGSG*LLLLEL
Trigger: GAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp CCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTTGCGGGAGATTTGTTCTGGTTCTGGCTaGTTACTACTGCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PYHHSFHIFLETASLREICSGSG*LLLLEL
Trigger: GAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACA...AATCTCCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCATTCCAGTGGAAACTaGTTTGACTGGCTGACTCTT +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLHSSGN*FDWLTL
Trigger: AAGAGTCAGCCAGTCAAATCAGTTTCCACTGGAATG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCATTCCAGTGGAAACTaGTTTGACTGGCTGACTCTT +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFHSSGN*FDWLTL
Trigger: AAGAGTCAGCCAGTCAAATCAGTTTCCACTGGAATG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGGATTACTGGGTTCCTTaGGATCAGGATCCTTATCAC +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLDYWVP*DQDPYH
Trigger: GTGATAAGGATCCTGATCTCAAGGAACCCAGTAATC...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATTTCTTGAAGAATTGTaGTGCGTTCGGCACTTGTCA +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRFLEEL*CVRHLS
Trigger: TGACAAGTGCCGAACGCATCACAATTCTTCAAGAAA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp AAAAACGACTTCAGCTTCTTCTTATTACATGTAACAGGCAAATTCCCAACAAACAAGGGAGGCGCTGGGTaGGGGAGCAGGTTTGTCGCC +
Preference number: 4 (lower is better)
Translates to: KNDFSFFLLHVTGKFPTNKGGAG*GSRFVA
Trigger: GGCGACAAACCTGCTCCCTCACCCAGCGCCTCCCTT...GTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAAGCATCAGGCTTTGGTaGAGTGTCACTAGTAATTTC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSIRLW*SVTSNF
Trigger: GAAATTACTAGTGACACTGCACCAAAGCCTGATGCT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGCCTGTTCAAAGGCTTaGTTTAAAACAGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFACSKA*FKTASG
Trigger: GCCTGATGCTGTTTTAAAGCAAGCCTTTGAACAGGC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTGGAAACTGATTGTTACAGAAGACTGCTaGCGGCTGCCTTCTGTTACA +
Preference number: 4 (lower is better)
Translates to: ASLREIWYYETSFQWKLIVTEDC*RLPSVT
Trigger: TGTAACAGAAGGCAGCCGGCAGCAGTCTTCTGTAAC...AATCAGTTTCCACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp GAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTCATTTTCCTGGAGACTaGGTCCTTGCGGGAGATTTG +
Preference number: 4 (lower is better)
Translates to: EIRILITILSTFSWRLRPHFPGD*VLAGDL
Trigger: CAAATCTCCCGCAAGGACGCAGTCTCCAGGAAAATG...AGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACCTCATCTTCATCACTaGAGGATGATGAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTPHLHH*RMMKTL
Trigger: AAGAGTCTTCATCATCCTCCAGTGATGAAGATGAGG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAAACAGCATCAGGCTTTaGTGCAGTGTCACTAGTAAT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRNSIRL*CSVTSN
Trigger: ATTACTAGTGACACTGCACCAAAGCCTGATGCTGTT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAAACAGCATCAGGCTTTaGTGCAGTGTCACTAGTAAT +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTNSIRL*CSVTSN
Trigger: ATTACTAGTGACACTGCACCAAAGCCTGATGCTGTT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTCTGAAATGGTGGTTTaGACAAGCGCCGAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLSEMVV*TSAEVY
Trigger: GTAAACTTCGGCGCTTGTCCAAACCACCATTTCAGA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGGATTTGTCTGAAATaGTGGTTTGGACAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSWICLK*WFGQAP
Trigger: CGGCGCTTGTCCAAACCACCATTTCAGACAAATCCA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCTATTCCCTTCAGACTaGAGGTCTTGGAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLFPSD*RSWSSP
Trigger: TGGGGAGCTCCAAGACCTCCAGTCTGAAGGGAATAG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp TGCGTTCGGCACTTGTCATATTTTCCAGGTCCGACATCTGAAAACTCCATTTGTCTATTCCCTTCAGACTaGAGGTCTTGGAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: CVRHLSYFPGPTSENSICLFPSD*RSWSSP
Trigger: TGGGGAGCTCCAAGACCTCCAGTCTGAAGGGAATAG...ACAAATGGAGTTTTCAGATGTCGGACCTGGAAAATATGACAAGTGCCGAACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp GAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTGGCATCAAAACCTGCTaGCGAGCTATTCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: EIRILITILSTFSWRLRPGIKTC*RAIPFR
Trigger: TCTGAAGGGAATAGCTCGCCAGCAGGTTTTGATGCC...AGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGCTGCCAACTTTTTGGATAGCGTTCCCTCTGCTGGAATCAGAGAACGAAATTGCTTGAGCTCACACTaGCATCAAAACCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: IAANFLDSVPSAGIRERNCLSSH*HQNLLA
Trigger: CGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCA...ATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCTTTCCACATTTTCCTaGAGACTGCGTCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLSTFS*RLRPCG
Trigger: CCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp CAGCTGAAAGTTCTTCACTATCACTACTATTTGCGCCTGGAAGTCATATGGGCTCTTTCCACATTTTCCTaGAGACTGCGTCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: QLKVLHYHYYLRLEVIWALSTFS*RLRPCG
Trigger: CCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAG...AGCCCATATGACTTCCAGGCGCAAATAGTAGTGATAGTGAAGAACTTTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCAGCTGTTATGGAACTaGATGAAGGTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSQLLWN*MKVKRR
Trigger: CCTCCTCTTCACCTTCATCCAGTTCCATAACAGCTG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGTCTTTTTGCTGTCTTaGTCTTGGCTTCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFVFLLS*SWLHKR
Trigger: CCTTTTGTGAAGCCAAGATCAAGACAGCAAAAAGAC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATTGATAACAGCTTCCTaGTATGCACCATCAAGATTC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRLITAS*YAPSRF
Trigger: GAATCTTGATGGTGCATATCAGGAAGCTGTTATCAA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATTGATAACAGCTTCCTaGTATGCACCATCAAGATTC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTLITAS*YAPSRF
Trigger: GAATCTTGATGGTGCATATCAGGAAGCTGTTATCAA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCAGTTTTTGGCATCAGTaGGATCCAGTTTGGATACCA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFSFWHQ*DPVWIP
Trigger: TGGTATCCAAACTGGATCTCACTGATGCCAAAAACT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTTATTATCCATGTCTTaGGCACCTCTCTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLLLSMS*APLSSS
Trigger: GGAAGATGAGAGAGGTGCTCAAGACATGGATAATAA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAGTTTTCCATGCAAAGTaGTTCTTTGTTCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTVFHAK*FFVLGL
Trigger: AAGGCCAAGAACAAAGAATCACTTTGCATGGAAAAC...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTTGGCCCTGCTGTTTTaGAGTCTTTCATCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFLALLF*SLSSEL
Trigger: TAACTCTGATGAAAGACTTCAAAACAGCAGGGCCAA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAGTTTACTATCGACATTaGCTGGAGGTGGTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTVYYRH*LEVVFL
Trigger: TAGAAAAACCACCTCCAGTCAATGTCGATAGTAAAC...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATCTTTCACTCTTTTCTaGCCTGTACAGGCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSFTLF*PVQAFS
Trigger: TGAAAAAGCCTGTACAGGTCAGAAAAGAGTGAAAGA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp CCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTTGCGGGAGATTCATTCCAGTGGAAACTaGTTTGACTGGCTGACTCTT +
Preference number: 4 (lower is better)
Translates to: PYHHSFHIFLETASLREIHSSGN*FDWLTL
Trigger: AAGAGTCAGCCAGTCAAATCAGTTTCCACTGGAATG...AATCTCCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTGATTACTGGGTTCCTTaGGATCAGGATCCTTATCAC +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSDYWVP*DQDPYH
Trigger: GTGATAAGGATCCTGATCTCAAGGAACCCAGTAATC...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTTTCTTGAAGAATTGTaGTGCGTTCGGCACTTGTCA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFFLEEL*CVRHLS
Trigger: TGACAAGTGCCGAACGCATCACAATTCTTCAAGAAA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTTTCTTGAAGAATTGTaGTGCGTTCGGCACTTGTCA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLFLEEL*CVRHLS
Trigger: TGACAAGTGCCGAACGCATCACAATTCTTCAAGAAA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATACAACAAAACGCATTaGAATTCCCACGTCGTATTG +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTYNKTH*NSHVVL
Trigger: CAATACGACGTGGGAATTTCAATGCGTTTTGTTGTA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAAACAGCTTCCTGATATaGACCATCAAGATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRNSFLI*TIKILH
Trigger: GTGAAGAATCTTGATGGTGCATATCAGGAAGCTGTT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GCAAGTCCTGCTGTCACCTGCACTCAACTGACATTCCATTTTGTGATGCGCTGGAACAGCTTCCTGATATaGACCATCAAGATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: ASPAVTCTQLTFHFVMRWNSFLI*TIKILH
Trigger: GTGAAGAATCTTGATGGTGCATATCAGGAAGCTGTT...CCAGCGCATCACAAAATGGAATGTCAGTTGAGTGCAGGTGACAGCAGGACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCAGCATCAGGCTTTGGTaGAGTGTCACTAGTAATTTC +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFSIRLW*SVTSNF
Trigger: GAAATTACTAGTGACACTGCACCAAAGCCTGATGCT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACCTTCTCTTCCTTTTTaGCAGGTGATCCAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRPSLPF*QVIQFL
Trigger: TAAAAACTGGATCACCTGGCAAAAAGGAAGAGAAGG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATTCGATCTTTGGCCCTaGTGTTTTGAAGTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRFDLWP*CFEVFH
Trigger: ATGAAAGACTTCAAAACAGCAGGGCCAAAGATCGAA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATTCGATCTTTGGCCCTaGTGTTTTGAAGTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTFDLWP*CFEVFH
Trigger: ATGAAAGACTTCAAAACAGCAGGGCCAAAGATCGAA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp TCAACTCTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTCTTCAGCCACAGTCTaGAGTGACTCCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: STLIRNPSAIWAPFLFNASSATV*SDSSAT
Trigger: GGTGGCAGAGGAGTCACTGCAGACTGTGGCTGAAGA...AGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATGTTACAGAAGACTGCTaGCGGCTGCCTTCTGTTACA +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHVTEDC*RLPSVT
Trigger: TGTAACAGAAGGCAGCCGGCAGCAGTCTTCTGTAAC...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATACTGTTACAGAAGACTaGTGCCGGCTGCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHTVTED*CRLPSV
Trigger: AACAGAAGGCAGCCGGCAGCAGTCTTCTGTAACAGT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp CAGCTGAAAGTTCTTCACTATCACTACTATTTGCGCCTGGAAGTCATATGGGCTACTGGCATCAAAACCTaGTGGCGAGCTATTCCCTTC +
Preference number: 4 (lower is better)
Translates to: QLKVLHYHYYLRLEVIWATGIKT*WRAIPF
Trigger: GAAGGGAATAGCTCGCCAGCAGGTTTTGATGCCAGT...AGCCCATATGACTTCCAGGCGCAAATAGTAGTGATAGTGAAGAACTTTCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTGGAGACTGCGTCCTTaGGGGAGATTTGGTACTATG +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHWRLRP*GRFGTM
Trigger: CATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCCATTAAGTGCAAAGTaGTTTAGCAAGTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFPLSAK*FSKSCC
Trigger: ACAGCAGGACTTGCTAAAGCACTTTGCACTTAATGG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCCATTAAGTGCAAAGTaGTTTAGCAAGTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLPLSAK*FSKSCC
Trigger: ACAGCAGGACTTGCTAAAGCACTTTGCACTTAATGG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAATTCCCACGTCGTATTaGCAGGAAACAAAGAAAACA +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRIPTSY*QETKKT
Trigger: TGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAAT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAATTCCCACGTCGTATTaGCAGGAAACAAAGAAAACA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTIPTSY*QETKKT
Trigger: TGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAAT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTTGGTGAGTGGGAGCTaGTCTAATGTTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLLVSGS*SNVSLS
Trigger: TGAAAGTGAAACATTAGACCAGCTCCCACTCACCAA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTTGGTGAGTGGGAGCTaGTCTAATGTTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFLVSGS*SNVSLS
Trigger: TGAAAGTGAAACATTAGACCAGCTCCCACTCACCAA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCCTCATCTTCATCACTaGAGGATGATGAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLPHLHH*RMMKTL
Trigger: AAGAGTCTTCATCATCCTCCAGTGATGAAGATGAGG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCCTCATCTTCATCACTaGAGGATGATGAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFPHLHH*RMMKTL
Trigger: AAGAGTCTTCATCATCCTCCAGTGATGAAGATGAGG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCAACAGCATCAGGCTTTaGTGCAGTGTCACTAGTAAT +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFNSIRL*CSVTSN
Trigger: ATTACTAGTGACACTGCACCAAAGCCTGATGCTGTT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTCTGAAATGGTGGTTTaGACAAGCGCCGAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSSEMVV*TSAEVY
Trigger: GTAAACTTCGGCGCTTGTCCAAACCACCATTTCAGA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCATCTTTTCGATCTTTaGCCCTGCTGTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLHLFDL*PCCFEV
Trigger: GACTTCAAAACAGCAGGGCCAAAGATCGAAAAGATG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCGTTGGGGCAGGATGCGGTaGGGAAGCTGCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: VLEVKLSPCLGLLTFFNRWGRMR*GSCSLS
Trigger: ACTGAGGCTGCAGCTTCCCCACCGCATCCTGCCCCA...ACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATTTCTAGTTCTACACTaGGTGAACAACTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTFLVLH*VNNSPL
Trigger: AAGAGGAGAGTTGTTCACCCAGTGTAGAACTAGAAA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTCCTTGCGGGAGATTTaGTACTATGAGACTTCATTC +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLSLREI*YYETSF
Trigger: GAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCTCCATTTGCCACAGTaGAAGGCCTTCCAGTTACCA +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLHLPQ*KAFQLP
Trigger: TGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp CTGACATTCCATTTTGTGATGCGCTGGACATTGACGGTTCAGCTAAAGTTAACAAGAACCTCGGGGAGCTaGCCGAATAACCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LTFHFVMRWTLTVQLKLTRTSGS*PNNPFL
Trigger: CAGAAAAGGGTTATTCGGCCAGCTCCCCGAGGTTCT...TGTTAACTTTAGCTGAACCGTCAATGTCCAGCGCATCACAAAATGGAATGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp ACAGTCCAGAAAGTGCTTCTCAATGGCAGATTCTTCAACTTTATAAGGGAGATTGTCGCCGTCGGTTGGTaGTCCTCGCCGTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: TVQKVLLNGRFFNFIREIVAVGW*SSPFQK
Trigger: TTTCTGAAACGGCGAGGACCACCAACCGACGGCGAC...AATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR CAA 72 bp CACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTaGCGGGAGATTTGGTACTATGAGACTTCATTCCAG +
Preference number: 4 (lower is better)
Translates to: HHSFHIFLETAS*REIWYYETSFQ
Trigger: CTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACTGAACTTCCACTGTTaGAGAATCATGTCTAAATGT +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTLNFHC*RIMSKC
Trigger: ACATTTAGACATGATTCTTCAACAGTGGAAGTTCAG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACTGAACTTCCACTGTTaGAGAATCATGTCTAAATGT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRLNFHC*RIMSKC
Trigger: ACATTTAGACATGATTCTTCAACAGTGGAAGTTCAG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTTTATGTGGTCATCCTaGACTTCCACTGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFFMWSS*TSTVEE
Trigger: TTCTTCAACAGTGGAAGTTCAGGATGACCACATAAA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTTTATGTGGTCATCCTaGACTTCCACTGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLFMWSS*TSTVEE
Trigger: TTCTTCAACAGTGGAAGTTCAGGATGACCACATAAA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp CGATTACTGGGTTCCTTGAGATCAGGATCCTTATCACCATTCTTTCCACATTTTAATGCTCAGGGTTGGTaGGTGGGAGCTGGTCTAATG +
Preference number: 4 (lower is better)
Translates to: RLLGSLRSGSLSPFFPHFNAQGW*VGAGLM
Trigger: CATTAGACCAGCTCCCACTCACCAACCCTGAGCATT...AAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATCTTCCTCTGGTATATaGTTAGATCTTCTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSSSGI*LDLLPL
Trigger: TAGAGGAAGAAGATCTAATCATATACCAGAGGAAGA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAAAATTCAATGTTGGCTaGTCTACAGTACTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTKFNVG*STVLLK
Trigger: TTTGAGGAGTACTGTAGATCAGCCAACATTGAATTT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTCTGGCAATGCCATCTaGAATTCAATGTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSSGNAI*NSMLAD
Trigger: ATCAGCCAACATTGAATTTCAGATGGCATTGCCAGA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGAACTTTCAGAAGCTTaGAGTCCATTAAGGATCGAA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFELSEA*SPLRIE
Trigger: TTCGATCCTTAATGGACTTCAAGCTTCTGAAAGTTC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACTGTTGTTGGTCAAATaGTCAATCTTAGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRLLLVK*SILDSS
Trigger: AGAGGAATCTAAGATTGATCATTTGACCAACAACAG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATCTTTCTGGAGATTTTaGCACTGGTTTGGATATTAC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRSFWRF*HWFGYY
Trigger: GTAATATCCAAACCAGTGTCAAAATCTCCAGAAAGA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGTTTTCCATGCAAAGTaGTTCTTTGTTCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFVFHAK*FFVLGL
Trigger: AAGGCCAAGAACAAAGAATCACTTTGCATGGAAAAC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGGTTTTCCATGCAAAGTaGTTCTTTGTTCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLVFHAK*FFVLGL
Trigger: AAGGCCAAGAACAAAGAATCACTTTGCATGGAAAAC...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGTTTACTATCGACATTaGCTGGAGGTGGTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFVYYRH*LEVVFL
Trigger: TAGAAAAACCACCTCCAGTCAATGTCGATAGTAAAC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TCCTGGAGACTGCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTGTTTACTATCGACATTaGCTGGAGGTGGTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SWRLRPCGRFGTMRLHSSVYYRH*LEVVFL
Trigger: TAGAAAAACCACCTCCAGTCAATGTCGATAGTAAAC...ACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAACTGATTTGACTGGCTaGCTCTTAGTTATACTTTCA +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRTDLTG*LLVILS
Trigger: TGAAAGTATAACTAAGAGTCAGCCAGTCAAATCAGT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTTTCTTGAAGAATTGTaGTGCGTTCGGCACTTGTCA +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSFLEEL*CVRHLS
Trigger: TGACAAGTGCCGAACGCATCACAATTCTTCAAGAAA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TACTTTCACCAGCTGAAAGTTCTTCACTATCACTACTATTTGCGCCTGGAAGTCTGTCTCTACAGGCAGTaGAAAGCCTCCATTTGCCAC +
Preference number: 4 (lower is better)
Translates to: YFHQLKVLHYHYYLRLEVCLYRQ*KASICH
Trigger: GTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACA...GACTTCCAGGCGCAAATAGTAGTGATAGTGAAGAACTTTCAGCTGGTGAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATACATTACTTGTTCCTaGAGTCCTTTTGTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTYITCS*SPFVVA
Trigger: AGCTACAACAAAAGGACTTCAGGAACAAGTAATGTA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGAATGTAAAGGATTCTaGCACGTTAGCATCTACAAC +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFECKGF*HVSIYN
Trigger: GTTGTAGATGCTAACGTGTCAGAATCCTTTACATTC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATTTGACAAGTCTTTTTaGTGTCTTGATCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTFDKSF*CLDLGF
Trigger: GAAGCCAAGATCAAGACAGCAAAAAGACTTGTCAAA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATTTGACAAGTCTTTTTaGTGTCTTGATCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRFDKSF*CLDLGF
Trigger: GAAGCCAAGATCAAGACAGCAAAAAGACTTGTCAAA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGAACAGCTTCCTGATATaGACCATCAAGATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLNSFLI*TIKILH
Trigger: GTGAAGAATCTTGATGGTGCATATCAGGAAGCTGTT...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCAACAGCTTCCTGATATaGACCATCAAGATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFNSFLI*TIKILH
Trigger: GTGAAGAATCTTGATGGTGCATATCAGGAAGCTGTT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACTACACATACAACTTTaGCTAGTAGCTCATCAATCT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRLHIQL*LVAHQS
Trigger: AGATTGATGAGCTACTAGGCAAAGTTGTATGTGTAG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTAGCATCAGGCTTTGGTaGAGTGTCACTAGTAATTTC +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSSIRLW*SVTSNF
Trigger: GAAATTACTAGTGACACTGCACCAAAGCCTGATGCT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATTTGTGAAATTCAAGTaGCTGTTCAAAGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRFVKFK*LFKGLL
Trigger: AAGCAAGCCTTTGAACAGGCACTTGAATTTCACAAA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATGCACTTGGACTTTCATaGCTGGTGGATAGCACTCAA +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHALGLS*LVDSTQ
Trigger: TTGAGTGCTATCCACCAGGCATGAAAGTCCAAGTGC...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264183.9
ENST00000366603.6
CDS-3UTR GCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCCTTCTCTTCCTTTTTaGCAGGTGATCCAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLPSLPF*QVIQFL
Trigger: TAAAAACTGGATCACCTGGCAAAAAGGAAGAGAAGG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCCTTCTCTTCCTTTTTaGCAGGTGATCCAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFPSLPF*QVIQFL
Trigger: TAAAAACTGGATCACCTGGCAAAAAGGAAGAGAAGG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ACAGTCCAGAAAGTGCTTCTCAATGGCAGATTCTTCAACTTTATAAGGGAGATTATGCGGTGGGGAAGCTaGAGCCTCAGTATCAGAGTC +
Preference number: 4 (lower is better)
Translates to: TVQKVLLNGRFFNFIREIMRWGS*SLSIRV
Trigger: GACTCTGATACTGAGGCTGCAGCTTCCCCACCGCAT...AATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAACTACTTGGAAATTCTaGTTTTCTGTCATTGACCTC +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTTTWKF*FSVIDL
Trigger: GAGGTCAATGACAGAAAAGCAGAATTTCCAAGTAGT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCTGGCTGATTACTACTaGTTGAGCTCACACTGGCAT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLADYY*LSSHWH
Trigger: ATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp TACTTTCACCAGCTGAAAGTTCTTCACTATCACTACTATTTGCGCCTGGAAGTCTGGAGACTGCGTCCTTaGGGGAGATTTGGTACTATG +
Preference number: 4 (lower is better)
Translates to: YFHQLKVLHYHYYLRLEVWRLRP*GRFGTM
Trigger: CATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCA...GACTTCCAGGCGCAAATAGTAGTGATAGTGAAGAACTTTCAGCTGGTGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCCATTAAGTGCAAAGTaGTTTAGCAAGTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSPLSAK*FSKSCC
Trigger: ACAGCAGGACTTGCTAAAGCACTTTGCACTTAATGG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp GTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCGTACGCCAGCCGACCGGTaGCACCTCTGGAATGGTGTT +
Preference number: 4 (lower is better)
Translates to: VLEVKLSPCLGLLTFFNRTPADR*HLWNGV
Trigger: AACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGT...ACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATCTGAAATTCAATGTTaGCTGATCTACAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSEIQC*LIYSTP
Trigger: AGGAGTACTGTAGATCAGCCAACATTGAATTTCAGA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAGTTAACAACTTTCTCTaGCAATGCCATCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRVNNFL*QCHLKF
Trigger: GAATTTCAGATGGCATTGCCAGAGAAAGTTGTTAAC...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCATCTTTTCGATCTTTaGCCCTGCTGTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSHLFDL*PCCFEV
Trigger: GACTTCAAAACAGCAGGGCCAAAGATCGAAAAGATG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCTTCGAACCTCTTCTTaGTTTGGAGCCAGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLRTSS*FGASGS
Trigger: AGAACCACTGGCTCCAAACCAAGAAGAGGTTCGAAG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATTTTTCAGGATGTTCTaGTTCTGGCTGATTACTACT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRFFRMF*FWLITT
Trigger: AGTAGTAATCAGCCAGAACCAGAACATCCTGAAAAA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTCCTTGCGGGAGATTTaGTACTATGAGACTTCATTC +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSSLREI*YYETSF
Trigger: GAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATTCTCCTCCGATCAATaGAAGCTACTTCAGATTTTA +
Preference number: 4 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTFSSDQ*KLLQIL
Trigger: TAAAATCTGAAGTAGCTTCCATTGATCGGAGGAGAA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATGACCGGTGCCACCTCTaGAATGGTGTTCGCCGCGAA +
Preference number: 4 (lower is better)
Translates to: AVLEVKLSPCLGLLTFFNDRCHL*NGVRRE
Trigger: TTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTC...ATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR CAA 72 bp CATGTTCTGACCCACCCCTTAACTATGCTTACTGTATaGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCA +
Preference number: 4 (lower is better)
Translates to: HVLTHPLTMLTV*SLQAVKSLHLP
Trigger: TGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATACAGTAAGCATAGTTAAGGGGTGGGTCAGAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCTGAACTTCCACTGTTaGAGAATCATGTCTAAATGT +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFLNFHC*RIMSKC
Trigger: ACATTTAGACATGATTCTTCAACAGTGGAAGTTCAG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTCTTCCTCTGGTATATaGTTAGATCTTCTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFSSSGI*LDLLPL
Trigger: TAGAGGAAGAAGATCTAATCATATACCAGAGGAAGA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCAAATTCAATGTTGGCTaGTCTACAGTACTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFKFNVG*STVLLK
Trigger: TTTGAGGAGTACTGTAGATCAGCCAACATTGAATTT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGAAATTCAATGTTGGCTaGTCTACAGTACTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLKFNVG*STVLLK
Trigger: TTTGAGGAGTACTGTAGATCAGCCAACATTGAATTT...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TGCGTTCGGCACTTGTCATATTTTCCAGGTCCGACATCTGAAAACTCCATTTGTGGAGATGGATTTGTCTaGAATGGTGGTTTGGACAAG +
Preference number: 4 (lower is better)
Translates to: CVRHLSYFPGPTSENSICGDGFV*NGGLDK
Trigger: CTTGTCCAAACCACCATTTCAGACAAATCCATCTCC...ACAAATGGAGTTTTCAGATGTCGGACCTGGAAAATATGACAAGTGCCGAACGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp GCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTGGAAACTGATTAGTTTTTGGCATCAGTaGGATCCAGTTTGGATACCA +
Preference number: 4 (lower is better)
Translates to: ASLREIWYYETSFQWKLISFWHQ*DPVWIP
Trigger: TGGTATCCAAACTGGATCTCACTGATGCCAAAAACT...AATCAGTTTCCACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTGAACTTTCAGAAGCTTaGAGTCCATTAAGGATCGAA +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSELSEA*SPLRIE
Trigger: TTCGATCCTTAATGGACTTCAAGCTTCTGAAAGTTC...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCTGTTGTTGGTCAAATaGTCAATCTTAGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFLLLVK*SILDSS
Trigger: AGAGGAATCTAAGATTGATCATTTGACCAACAACAG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp CGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTGCGTGGCAGCATCTTTCTGGAGATTTTaGCACTGGTTTGGATATTAC +
Preference number: 4 (lower is better)
Translates to: RNPSAIWAPFLFNACVAASFWRF*HWFGYY
Trigger: GTAATATCCAAACCAGTGTCAAAATCTCCAGAAAGA...TGCTGCCACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp GCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTGGAAACTGATTTTGGCCCTGCTGTTTTaGAGTCTTTCATCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: ASLREIWYYETSFQWKLILALLF*SLSSEL
Trigger: TAACTCTGATGAAAGACTTCAAAACAGCAGGGCCAA...AATCAGTTTCCACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTGCTGCCAACTTTTTGGATAGCGTTCCCTCTGCTGGAATCAGAGAACGAAATCTGTCCCTGAATACTTaGCCAGACATCTTTTCGATC +
Preference number: 4 (lower is better)
Translates to: IAANFLDSVPSAGIRERNLSLNT*PDIFSI
Trigger: GATCGAAAAGATGTCTGGTCAAGTATTCAGGGACAG...ATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTGTTTACTATCGACATTaGCTGGAGGTGGTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSVYYRH*LEVVFL
Trigger: TAGAAAAACCACCTCCAGTCAATGTCGATAGTAAAC...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCTGATTACTACTGCTTaGGCTCACACTGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLITTA*AHTGIK
Trigger: TTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTCTTTCACTCTTTTCTaGCCTGTACAGGCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSSFTLF*PVQAFS
Trigger: TGAAAAAGCCTGTACAGGTCAGAAAAGAGTGAAAGA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTATACTTTCACCAGCTaGAAGTTCTTCACTATCACT +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLYTFTS*KFFTIT
Trigger: AGTGATAGTGAAGAACTTTCAGCTGGTGAAAGTATA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCACTGATTTGACTGGCTaGCTCTTAGTTATACTTTCA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFTDLTG*LLVILS
Trigger: TGAAAGTATAACTAAGAGTCAGCCAGTCAAATCAGT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTACATTACTTGTTCCTaGAGTCCTTTTGTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFYITCS*SPFVVA
Trigger: AGCTACAACAAAAGGACTTCAGGAACAAGTAATGTA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTACAACAAAACGCATTaGAATTCCCACGTCGTATTG +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSYNKTH*NSHVVL
Trigger: CAATACGACGTGGGAATTTCAATGCGTTTTGTTGTA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTGAATGTAAAGGATTCTaGCACGTTAGCATCTACAAC +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSECKGF*HVSIYN
Trigger: GTTGTAGATGCTAACGTGTCAGAATCCTTTACATTC...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATCACACTCCTTACATTaGTTGTTAACAACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRSHSLH*LLTTFS
Trigger: AGAGAAAGTTGTTAACAAGCAATGTAAGGAGTGTGA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp TTGTCTCTAGATGAGGTCTCAGATGCGAGATCAACTCTAATACGAAATCCATCTTGGAGACTGCGTCCTTaGGGGAGATTTGGTACTATG +
Preference number: 4 (lower is better)
Translates to: LSLDEVSDARSTLIRNPSWRLRP*GRFGTM
Trigger: CATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCA...AGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp TTGTCTCTAGATGAGGTCTCAGATGCGAGATCAACTCTAATACGAAATCCATCTCATTTTCCTGGAGACTaGGTCCTTGCGGGAGATTTG +
Preference number: 4 (lower is better)
Translates to: LSLDEVSDARSTLIRNPSHFPGD*VLAGDL
Trigger: CAAATCTCCCGCAAGGACGCAGTCTCCAGGAAAATG...AGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTCTGAAATTCAATGTTaGCTGATCTACAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFSEIQC*LIYSTP
Trigger: AGGAGTACTGTAGATCAGCCAACATTGAATTTCAGA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGGTTAACAACTTTCTCTaGCAATGCCATCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLVNNFL*QCHLKF
Trigger: GAATTTCAGATGGCATTGCCAGAGAAAGTTGTTAAC...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTCTGAAATGGTGGTTTaGACAAGCGCCGAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHSEMVV*TSAEVY
Trigger: GTAAACTTCGGCGCTTGTCCAAACCACCATTTCAGA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp CAGCTGAAAGTTCTTCACTATCACTACTATTTGCGCCTGGAAGTCATATGGGCTTCTGAAATGGTGGTTTaGACAAGCGCCGAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: QLKVLHYHYYLRLEVIWASEMVV*TSAEVY
Trigger: GTAAACTTCGGCGCTTGTCCAAACCACCATTTCAGA...AGCCCATATGACTTCCAGGCGCAAATAGTAGTGATAGTGAAGAACTTTCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATATTTGTCTGAAATGGTaGTTTGGACAAGCGCCGAAG +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHICLKW*FGQAPK
Trigger: CTTCGGCGCTTGTCCAAACCACCATTTCAGACAAAT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTTTTTCAGGATGTTCTaGTTCTGGCTGATTACTACT +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLFFRMF*FWLITT
Trigger: AGTAGTAATCAGCCAGAACCAGAACATCCTGAAAAA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTTCTCCTCCGATCAATaGAAGCTACTTCAGATTTTA +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLFSSDQ*KLLQIL
Trigger: TAAAATCTGAAGTAGCTTCCATTGATCGGAGGAGAA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTTCTCCTCCGATCAATaGAAGCTACTTCAGATTTTA +
Preference number: 4 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFFSSDQ*KLLQIL
Trigger: TAAAATCTGAAGTAGCTTCCATTGATCGGAGGAGAA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCATTTTGTGATGCGCTaGACATTGACGGTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHHFVMR*TLTVQL
Trigger: TAGCTGAACCGTCAATGTCCAGCGCATCACAAAATG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAAATTCCCAGACAAGTTaGAAACAATTATTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRNSQTS*KQLLLE
Trigger: CTCAAGCAATAATTGTTTCCAACTTGTCTGGGAATT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp AAAAACGACTTCAGCTTCTTCTTATTACATGTAACAGGCAAATTCCCAACAAACTTTGTCGCCGTCGGTTaGTGGTCCTCGCCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: KNDFSFFLLHVTGKFPTNFVAVG*WSSPFQ
Trigger: CTGAAACGGCGAGGACCACCAACCGACGGCGACAAA...GTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCTGAACTTCCACTGTTaGAGAATCATGTCTAAATGT +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSLNFHC*RIMSKC
Trigger: ACATTTAGACATGATTCTTCAACAGTGGAAGTTCAG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp GAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTTTTATGTGGTCATCCTaGACTTCCACTGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: EIRILITILSTFSWRLRPFMWSS*TSTVEE
Trigger: TTCTTCAACAGTGGAAGTTCAGGATGACCACATAAA...AGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp GAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTTTGATAACAGCTTCCTaGTATGCACCATCAAGATTC +
Preference number: 4 (lower is better)
Translates to: EIRILITILSTFSWRLRPLITAS*YAPSRF
Trigger: GAATCTTGATGGTGCATATCAGGAAGCTGTTATCAA...AGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATAGTTTTTGGCATCAGTaGGATCCAGTTTGGATACCA +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHSFWHQ*DPVWIP
Trigger: TGGTATCCAAACTGGATCTCACTGATGCCAAAAACT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTTATTATCCATGTCTTaGGCACCTCTCTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLLSMS*APLSSS
Trigger: GGAAGATGAGAGAGGTGCTCAAGACATGGATAATAA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTCTTTCTGGAGATTTTaGCACTGGTTTGGATATTAC +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSSFWRF*HWFGYY
Trigger: GTAATATCCAAACCAGTGTCAAAATCTCCAGAAAGA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR TCA 90 bp CCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTTGCGGGAGATTTCTTTCTGGAGATTTTaGCACTGGTTTGGATATTAC +
Preference number: 4 (lower is better)
Translates to: PYHHSFHIFLETASLREISFWRF*HWFGYY
Trigger: GTAATATCCAAACCAGTGTCAAAATCTCCAGAAAGA...AATCTCCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTTGGCCCTGCTGTTTTaGAGTCTTTCATCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLALLF*SLSSEL
Trigger: TAACTCTGATGAAAGACTTCAAAACAGCAGGGCCAA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp CTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTGCGTGTTGGCCCTGCTGTTTTaGAGTCTTTCATCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: LIRNPSAIWAPFLFNACVLALLF*SLSSEL
Trigger: TAACTCTGATGAAAGACTTCAAAACAGCAGGGCCAA...CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp GAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTTCTTTCACTCTTTTCTaGCCTGTACAGGCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: EIRILITILSTFSWRLRPSFTLF*PVQAFS
Trigger: TGAAAAAGCCTGTACAGGTCAGAAAAGAGTGAAAGA...AGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTATACTTTCACCAGCTaGAAGTTCTTCACTATCACT +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSYTFTS*KFFTIT
Trigger: AGTGATAGTGAAGAACTTTCAGCTGGTGAAAGTATA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCTACACATACAACTTTaGCTAGTAGCTCATCAATCT +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSLHIQL*LVAHQS
Trigger: AGATTGATGAGCTACTAGGCAAAGTTGTATGTGTAG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTTTGTGAAATTCAAGTaGCTGTTCAAAGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSFVKFK*LFKGLL
Trigger: AAGCAAGCCTTTGAACAGGCACTTGAATTTCACAAA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTCACACTCCTTACATTaGTTGTTAACAACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLSHSLH*LLTTFS
Trigger: AGAGAAAGTTGTTAACAAGCAATGTAAGGAGTGTGA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTACTACTTGGAAATTCTaGTTTTCTGTCATTGACCTC +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSTTWKF*FSVIDL
Trigger: GAGGTCAATGACAGAAAAGCAGAATTTCCAAGTAGT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR GCA 90 bp ATCAACTCTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTTCTTTTCAATGCTTaGGTGGCAGCACTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: INSNTKSICNLGPISFQCFLFNA*VAALSS
Trigger: GGAGGAGAGTGCTGCCACGCAAGCATTGAAAAGAAA...GCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp ATTGCTGCCAACTTTTTGGATAGCGTTCCCTCTGCTGGAATCAGAGAACGAAATAATACGAAATCCATCTaGAATCTGGGCCCCATTTCT +
Preference number: 4 (lower is better)
Translates to: IAANFLDSVPSAGIRERNNTKSI*NLGPIS
Trigger: AGAAATGGGGCCCAGATTGCAGATGGATTTCGTATT...ATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTTGGTGAGTGGGAGCTaGTCTAATGTTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLVSGS*SNVSLS
Trigger: TGAAAGTGAAACATTAGACCAGCTCCCACTCACCAA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp CTGACATTCCATTTTGTGATGCGCTGGACATTGACGGTTCAGCTAAAGTTAACAATTTGTCTGAAATGGTaGTTTGGACAAGCGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LTFHFVMRWTLTVQLKLTICLKW*FGQAPK
Trigger: CTTCGGCGCTTGTCCAAACCACCATTTCAGACAAAT...TGTTAACTTTAGCTGAACCGTCAATGTCCAGCGCATCACAAAATGGAATGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCATCTTTTCGATCTTTaGCCCTGCTGTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHHLFDL*PCCFEV
Trigger: GACTTCAAAACAGCAGGGCCAAAGATCGAAAAGATG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp ATTGCTGCCAACTTTTTGGATAGCGTTCCCTCTGCTGGAATCAGAGAACGAAATCATCTTTTCGATCTTTaGCCCTGCTGTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: IAANFLDSVPSAGIRERNHLFDL*PCCFEV
Trigger: GACTTCAAAACAGCAGGGCCAAAGATCGAAAAGATG...ATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp CGATTACTGGGTTCCTTGAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCTTCGAACCTCTTCTTaGTTTGGAGCCAGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RLLGSLRSGSLSPFFPHFLRTSS*FGASGS
Trigger: AGAACCACTGGCTCCAAACCAAGAAGAGGTTCGAAG...AAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTCCTTGCGGGAGATTTaGTACTATGAGACTTCATTC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHSLREI*YYETSF
Trigger: GAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp TCTTTGACTGACAACTGTGTCTTCTGTGTCATCAAGTATTTTTCTATCTGCTACCTTTCCACATTTTCCTaGAGACTGCGTCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: SLTDNCVFCVIKYFSICYLSTFS*RLRPCG
Trigger: CCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAG...GTAGCAGATAGAAAAATACTTGATGACACAGAAGACACAGTTGTCAGTCAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp CCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTTGCGGGAGATTTTCTCCTCCGATCAATaGAAGCTACTTCAGATTTTA +
Preference number: 4 (lower is better)
Translates to: PYHHSFHIFLETASLREIFSSDQ*KLLQIL
Trigger: TAAAATCTGAAGTAGCTTCCATTGATCGGAGGAGAA...AATCTCCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGAATTCCCAGACAAGTTaGAAACAATTATTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLNSQTS*KQLLLE
Trigger: CTCAAGCAATAATTGTTTCCAACTTGTCTGGGAATT...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGCTGCCAACTTTTTGGATAGCGTTCCCTCTGCTGGAATCAGAGAACGAAATAGGTTCTTGCGAAAGTaGTCTTTCAATCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: IAANFLDSVPSAGIRERNRFLRK*SFNLGC
Trigger: ACATCCCAGATTGAAAGACCACTTTCGCAAGAACCT...ATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp TGCGTTCGGCACTTGTCATATTTTCCAGGTCCGACATCTGAAAACTCCATTTGTGTTTTCCATGCAAAGTaGTTCTTTGTTCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: CVRHLSYFPGPTSENSICVFHAK*FFVLGL
Trigger: AAGGCCAAGAACAAAGAATCACTTTGCATGGAAAAC...ACAAATGGAGTTTTCAGATGTCGGACCTGGAAAATATGACAAGTGCCGAACGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR TCA 90 bp ATCAACTCTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCCTGATTACTACTGCTTaGGCTCACACTGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: INSNTKSICNLGPISFQCLITTA*AHTGIK
Trigger: TTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAG...GCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTACAACAAAACGCATTaGAATTCCCACGTCGTATTG +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHYNKTH*NSHVVL
Trigger: CAATACGACGTGGGAATTTCAATGCGTTTTGTTGTA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATGAATGTAAAGGATTCTaGCACGTTAGCATCTACAAC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHECKGF*HVSIYN
Trigger: GTTGTAGATGCTAACGTGTCAGAATCCTTTACATTC...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp GCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTGGAAACTGATTTTTGACAAGTCTTTTTaGTGTCTTGATCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ASLREIWYYETSFQWKLIFDKSF*CLDLGF
Trigger: GAAGCCAAGATCAAGACAGCAAAAAGACTTGTCAAA...AATCAGTTTCCACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp CTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTGCGTGCCTTCTCTTCCTTTTTaGCAGGTGATCCAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: LIRNPSAIWAPFLFNACVPSLPF*QVIQFL
Trigger: TAAAAACTGGATCACCTGGCAAAAAGGAAGAGAAGG...CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTTCGATCTTTGGCCCTaGTGTTTTGAAGTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHFDLWP*CFEVFH
Trigger: ATGAAAGACTTCAAAACAGCAGGGCCAAAGATCGAA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp GAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTACTACTTGGAAATTCTaGTTTTCTGTCATTGACCTC +
Preference number: 4 (lower is better)
Translates to: EIRILITILSTFSWRLRPTTWKF*FSVIDL
Trigger: GAGGTCAATGACAGAAAAGCAGAATTTCCAAGTAGT...AGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp TCTTTGACTGACAACTGTGTCTTCTGTGTCATCAAGTATTTTTCTATCTGCTACGTTACAGAAGACTGCTaGCGGCTGCCTTCTGTTACA +
Preference number: 4 (lower is better)
Translates to: SLTDNCVFCVIKYFSICYVTEDC*RLPSVT
Trigger: TGTAACAGAAGGCAGCCGGCAGCAGTCTTCTGTAAC...GTAGCAGATAGAAAAATACTTGATGACACAGAAGACACAGTTGTCAGTCAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATAAAAGTGCACTTAAGTaGCAAGTCAGCTTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHKSALK*QVSLSR
Trigger: TCTTGACAAGCTGACTTGGCACTTAAGTGCACTTTT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp CTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTGCGTGTTTTTGGCAGGTTCTTaGGAAAGTGGTCTTTCAATC +
Preference number: 4 (lower is better)
Translates to: LIRNPSAIWAPFLFNACVFLAGS*ESGLSI
Trigger: GATTGAAAGACCACTTTCGCAAGAACCTGCCAAAAA...CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTTTCTAGTTCTACACTaGGTGAACAACTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHFLVLH*VNNSPL
Trigger: AAGAGGAGAGTTGTTCACCCAGTGTAGAACTAGAAA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp CAGCTGAAAGTTCTTCACTATCACTACTATTTGCGCCTGGAAGTCATATGGGCTTTTCTAGTTCTACACTaGGTGAACAACTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QLKVLHYHYYLRLEVIWAFLVLH*VNNSPL
Trigger: AAGAGGAGAGTTGTTCACCCAGTGTAGAACTAGAAA...AGCCCATATGACTTCCAGGCGCAAATAGTAGTGATAGTGAAGAACTTTCAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCTATTCCCTTCAGACTaGAGGTCTTGGAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AVLEVKLSPCLGLLTFFNLFPSD*RSWSSP
Trigger: TGGGGAGCTCCAAGACCTCCAGTCTGAAGGGAATAG...ATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTCCATTTGTAAACTTTaGGTAATCGATTACTGGGTT +
Preference number: 4 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSSICKL*VIDYWV
Trigger: AACCCAGTAATCGATTACCCAAAGTTTACAAATGGA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CCA 90 bp CCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTTGCGGGAGATTTCCATTTGTAAACTTTaGGTAATCGATTACTGGGTT +
Preference number: 4 (lower is better)
Translates to: PYHHSFHIFLETASLREISICKL*VIDYWV
Trigger: AACCCAGTAATCGATTACCCAAAGTTTACAAATGGA...AATCTCCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATGTGCCACCTCTGGAATaGTGTTCGCCGCGAAATAAG +
Preference number: 4 (lower is better)
Translates to: AVLEVKLSPCLGLLTFFNVPPLE*CSPRNK
Trigger: CTTATTTCGCGGCGAACACCATTCCAGAGGTGGCAC...ATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ATTGCTGCCAACTTTTTGGATAGCGTTCCCTCTGCTGGAATCAGAGAACGAAATAATCCATCTGCAATCTaGGCCCCATTTCTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: IAANFLDSVPSAGIRERNNPSAI*APFLFN
Trigger: ATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATT...ATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCTGTTGTTGGTCAAATaGTCAATCTTAGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLLLVK*SILDSS
Trigger: AGAGGAATCTAAGATTGATCATTTGACCAACAACAG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTATACTTTCACCAGCTaGAAGTTCTTCACTATCACT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHYTFTS*KFFTIT
Trigger: AGTGATAGTGAAGAACTTTCAGCTGGTGAAAGTATA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATACTGATTTGACTGGCTaGCTCTTAGTTATACTTTCA +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHTDLTG*LLVILS
Trigger: TGAAAGTATAACTAAGAGTCAGCCAGTCAAATCAGT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp ACAGTCCAGAAAGTGCTTCTCAATGGCAGATTCTTCAACTTTATAAGGGAGATTCATTCCAGTGGAAACTaGTTTGACTGGCTGACTCTT +
Preference number: 4 (lower is better)
Translates to: TVQKVLLNGRFFNFIREIHSSGN*FDWLTL
Trigger: AAGAGTCAGCCAGTCAAATCAGTTTCCACTGGAATG...AATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTACATTACTTGTTCCTaGAGTCCTTTTGTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHYITCS*SPFVVA
Trigger: AGCTACAACAAAAGGACTTCAGGAACAAGTAATGTA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp ATCAACTCTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTCTTCTGGGAGTGGTTaGAGCATTCCATTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: INSNTKSICNLGPISFQCSSGSG*SIPFCD
Trigger: ATCACAAAATGGAATGCTTCAACCACTCCCAGAAGA...GCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTTTGACAAGTCTTTTTaGTGTCTTGATCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHFDKSF*CLDLGF
Trigger: GAAGCCAAGATCAAGACAGCAAAAAGACTTGTCAAA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCTACACATACAACTTTaGCTAGTAGCTCATCAATCT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLHIQL*LVAHQS
Trigger: AGATTGATGAGCTACTAGGCAAAGTTGTATGTGTAG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTTTGTGAAATTCAAGTaGCTGTTCAAAGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHFVKFK*LFKGLL
Trigger: AAGCAAGCCTTTGAACAGGCACTTGAATTTCACAAA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp CTGACATTCCATTTTGTGATGCGCTGGACATTGACGGTTCAGCTAAAGTTAACATTCGATCTTTGGCCCTaGTGTTTTGAAGTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LTFHFVMRWTLTVQLKLTFDLWP*CFEVFH
Trigger: ATGAAAGACTTCAAAACAGCAGGGCCAAAGATCGAA...TGTTAACTTTAGCTGAACCGTCAATGTCCAGCGCATCACAAAATGGAATGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTCTGAAATTCAATGTTaGCTGATCTACAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHSEIQC*LIYSTP
Trigger: AGGAGTACTGTAGATCAGCCAACATTGAATTTCAGA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATGTTAACAACTTTCTCTaGCAATGCCATCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHVNNFL*QCHLKF
Trigger: GAATTTCAGATGGCATTGCCAGAGAAAGTTGTTAAC...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp CGATTACTGGGTTCCTTGAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCATCTTTTCGATCTTTaGCCCTGCTGTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: RLLGSLRSGSLSPFFPHFHLFDL*PCCFEV
Trigger: GACTTCAAAACAGCAGGGCCAAAGATCGAAAAGATG...AAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp ATTGCTGCCAACTTTTTGGATAGCGTTCCCTCTGCTGGAATCAGAGAACGAAATTTCTCCTCCGATCAATaGAAGCTACTTCAGATTTTA +
Preference number: 4 (lower is better)
Translates to: IAANFLDSVPSAGIRERNFSSDQ*KLLQIL
Trigger: TAAAATCTGAAGTAGCTTCCATTGATCGGAGGAGAA...ATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ACAGTCCAGAAAGTGCTTCTCAATGGCAGATTCTTCAACTTTATAAGGGAGATTCATTTTGTGATGCGCTaGACATTGACGGTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: TVQKVLLNGRFFNFIREIHFVMR*TLTVQL
Trigger: TAGCTGAACCGTCAATGTCCAGCGCATCACAAAATG...AATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ACAGTCCAGAAAGTGCTTCTCAATGGCAGATTCTTCAACTTTATAAGGGAGATTGACGTCTTCTGGGAGTaGTTGAAGCATTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: TVQKVLLNGRFFNFIREIDVFWE*LKHSIL
Trigger: CAAAATGGAATGCTTCAACCACTCCCAGAAGACGTC...AATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp GCAGTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATGTGAAGGACGTCTTCTaGGAGTGGTTGAAGCATTCC +
Preference number: 4 (lower is better)
Translates to: AVLEVKLSPCLGLLTFFNVKDVF*EWLKHS
Trigger: GGAATGCTTCAACCACTCCCAGAAGACGTCCTTCAC...ATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp ATCAACTCTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCGTTTTCCATGCAAAGTaGTTCTTTGTTCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: INSNTKSICNLGPISFQCVFHAK*FFVLGL
Trigger: AAGGCCAAGAACAAAGAATCACTTTGCATGGAAAAC...GCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp AAAAACGACTTCAGCTTCTTCTTATTACATGTAACAGGCAAATTCCCAACAAACTGTTCTGGTTCTGGCTaGTTACTACTGCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KNDFSFFLLHVTGKFPTNCSGSG*LLLLEL
Trigger: GAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACA...GTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp CTGACATTCCATTTTGTGATGCGCTGGACATTGACGGTTCAGCTAAAGTTAACATTTGTGAAATTCAAGTaGCTGTTCAAAGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LTFHFVMRWTLTVQLKLTFVKFK*LFKGLL
Trigger: AAGCAAGCCTTTGAACAGGCACTTGAATTTCACAAA...TGTTAACTTTAGCTGAACCGTCAATGTCCAGCGCATCACAAAATGGAATGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR GCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTCACACTCCTTACATTaGTTGTTAACAACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHSHSLH*LLTTFS
Trigger: AGAGAAAGTTGTTAACAAGCAATGTAAGGAGTGTGA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR GCA 90 bp TTAAGGAGAACAGCTTTTTCTCCAATAAATAAGCTTTTAGGATGTCCTTCTGCACTGGCTGATTACTACTaGTTGAGCTCACACTGGCAT +
Preference number: 4 (lower is better)
Translates to: LRRTAFSPINKLLGCPSALADYY*LSSHWH
Trigger: ATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAG...TGCAGAAGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGTTCTCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp AAAAACGACTTCAGCTTCTTCTTATTACATGTAACAGGCAAATTCCCAACAAACCCCATTTCTTTTCAATaGTTGCGTGGCAGCACTCTC +
Preference number: 4 (lower is better)
Translates to: KNDFSFFLLHVTGKFPTNPISFQ*LRGSTL
Trigger: GAGAGTGCTGCCACGCAAGCATTGAAAAGAAATGGG...GTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp TCTTTGACTGACAACTGTGTCTTCTGTGTCATCAAGTATTTTTCTATCTGCTACCCACAGTCCAGAAAGTaGTTCTCAATGGCAGATTCT +
Preference number: 4 (lower is better)
Translates to: SLTDNCVFCVIKYFSICYPQSRK*FSMADS
Trigger: AGAATCTGCCATTGAGAAGCACTTTCTGGACTGTGG...GTAGCAGATAGAAAAATACTTGATGACACAGAAGACACAGTTGTCAGTCAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ATCAACTCTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTTCTAGTTCTACACTaGGTGAACAACTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: INSNTKSICNLGPISFQCFLVLH*VNNSPL
Trigger: AAGAGGAGAGTTGTTCACCCAGTGTAGAACTAGAAA...GCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp GTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCGTCTTCGAACCTCTTCTTaGTTTGGAGCCAGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VLEVKLSPCLGLLTFFNRLRTSS*FGASGS
Trigger: AGAACCACTGGCTCCAAACCAAGAAGAGGTTCGAAG...ACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTCCATTTGTAAACTTTaGGTAATCGATTACTGGGTT +
Preference number: 4 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHSICKL*VIDYWV
Trigger: AACCCAGTAATCGATTACCCAAAGTTTACAAATGGA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CCA 90 bp AAAAACGACTTCAGCTTCTTCTTATTACATGTAACAGGCAAATTCCCAACAAACCAGCTGTTATGGAACTaGATGAAGGTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KNDFSFFLLHVTGKFPTNQLLWN*MKVKRR
Trigger: CCTCCTCTTCACCTTCATCCAGTTCCATAACAGCTG...GTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp GTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCGTTTGCTGCCAACTTTTTaGATAGCGTTCCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLEVKLSPCLGLLTFFNRLLPTF*IAFPLL
Trigger: CAGCAGAGGGAACGCTATCCAAAAAGTTGGCAGCAA...ACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp TTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCGTGGATTATTATCCATGTCTTaGGCACCTCTCTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: LEVKLSPCLGLLTFFNRGLLSMS*APLSSS
Trigger: GGAAGATGAGAGAGGTGCTCAAGACATGGATAATAA...TCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CCA 90 bp CGATTACTGGGTTCCTTGAGATCAGGATCCTTATCACCATTCTTTCCACATTTTTTTTTCAGGATGTTCTaGTTCTGGCTGATTACTACT +
Preference number: 4 (lower is better)
Translates to: RLLGSLRSGSLSPFFPHFFFRMF*FWLITT
Trigger: AGTAGTAATCAGCCAGAACCAGAACATCCTGAAAAA...AAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG
39% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp TTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCGTGGAAGTGGTCTTTCAATCTaGGATGTACTTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEVKLSPCLGLLTFFNRGSGLSI*DVLSSS
Trigger: GGAGGAAGAAAGTACATCCCAGATTGAAAGACCACT...TCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp TGCAGTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATTTCTTGAAGAATTGTaGTGCGTTCGGCACTTGTCA +
Preference number: 4 (lower is better)
Translates to: CSFGSKIKSLLRFTDILQFLEEL*CVRHLS
Trigger: TGACAAGTGCCGAACGCATCACAATTCTTCAAGAAA...TTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp CGATTACTGGGTTCCTTGAGATCAGGATCCTTATCACCATTCTTTCCACATTTTTCACACTCCTTACATTaGTTGTTAACAACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RLLGSLRSGSLSPFFPHFSHSLH*LLTTFS
Trigger: AGAGAAAGTTGTTAACAAGCAATGTAAGGAGTGTGA...AAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CCA 90 bp GCAGTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATTCCTTGCGGGAGATTTaGTACTATGAGACTTCATTC +
Preference number: 4 (lower is better)
Translates to: AVLEVKLSPCLGLLTFFNSLREI*YYETSF
Trigger: GAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGA...ATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
3UTR CAA 72 bp ACCACCATCCTTTTGAGACAGTTCCTATCAACAATCTaGAACCATACTAATACATTACTTGTTCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: TTILLRQFLSTI*NHTNTLLVPEV
Trigger: GACTTCAGGAACAAGTAATGTATTAGTATGGTTCAAGATTGTTGATAGGAACTGTCTCAAAAGGATGGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR TCA 90 bp GTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCGTTCTTTCACTCTTTTCTaGCCTGTACAGGCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: VLEVKLSPCLGLLTFFNRSFTLF*PVQAFS
Trigger: TGAAAAAGCCTGTACAGGTCAGAAAAGAGTGAAAGA...ACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp AAAAACGACTTCAGCTTCTTCTTATTACATGTAACAGGCAAATTCCCAACAAACTTCGATCTTTGGCCCTaGTGTTTTGAAGTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: KNDFSFFLLHVTGKFPTNFDLWP*CFEVFH
Trigger: ATGAAAGACTTCAAAACAGCAGGGCCAAAGATCGAA...GTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp AAAAACGACTTCAGCTTCTTCTTATTACATGTAACAGGCAAATTCCCAACAAACTATACTTTCACCAGCTaGAAGTTCTTCACTATCACT +
Preference number: 4 (lower is better)
Translates to: KNDFSFFLLHVTGKFPTNYTFTS*KFFTIT
Trigger: AGTGATAGTGAAGAACTTTCAGCTGGTGAAAGTATA...GTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR TCA 90 bp TTAAGGAGAACAGCTTTTTCTCCAATAAATAAGCTTTTAGGATGTCCTTCTGCAACTGATTTGACTGGCTaGCTCTTAGTTATACTTTCA +
Preference number: 4 (lower is better)
Translates to: LRRTAFSPINKLLGCPSATDLTG*LLVILS
Trigger: TGAAAGTATAACTAAGAGTCAGCCAGTCAAATCAGT...TGCAGAAGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGTTCTCCTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp TGCAGTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAAACTACTTGGAAATTCTaGTTTTCTGTCATTGACCTC +
Preference number: 4 (lower is better)
Translates to: CSFGSKIKSLLRFTDILQTTWKF*FSVIDL
Trigger: GAGGTCAATGACAGAAAAGCAGAATTTCCAAGTAGT...TTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR GCA 90 bp AAAAACGACTTCAGCTTCTTCTTATTACATGTAACAGGCAAATTCCCAACAAACGTAAAATTAAGTCCCTaGTTAGGTTTACTGACATTC +
Preference number: 4 (lower is better)
Translates to: KNDFSFFLLHVTGKFPTNVKLSP*LGLLTF
Trigger: GAATGTCAGTAAACCTAAGCAGGGACTTAATTTTAC...GTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS CCA 90 bp CTGCGCGCCAGCTCGCACTTCCGGGTTCCGGGCACTTCCGCTCTCTaGCCACGCCCCCTCCCCTCCGGCAGTCGGCCGCCGGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: LRASSHFRVPGTSAL*PRPLPSGSRPPGGG
Trigger: GCCGCCGCCCGGCGGCCGACTGCCGGAGGGGAGGGGGCGTGGCCAGAGAGCGGAAGTGCCCGGAACCCGGAAGTGCGAGCTGGCGCGCAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS GCA 90 bp GAGGGCCTGTGGGCCGCGGGCAGGACCGGCCCGCCACAGAGCCCCTaGCCACGTCCCGTTCCGGGCTCAGACCCGACAAGTGGGAGCGAG +
Preference number: 5 (lower is better)
Translates to: EGLWAAGRTGPPQSP*PRPVPGSDPTSGSE
Trigger: CTCGCTCCCACTTGTCGGGTCTGAGCCCGGAACGGGACGTGGGCAGGGGCTCTGTGGCGGGCCGGTCCTGCCCGCGGCCCACAGGCCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366603.6
CDS CCA 90 bp CTCCCCTCCGGCAGTCGGCCGCCGGGCGGCGGCGAAGGGAGGCGCTaGGTGAGGGAGCAGGTTTGTCGCCGTCGGTTGGTGGTCCTCGCC +
Preference number: 5 (lower is better)
Translates to: LPSGSRPPGGGEGRR*VREQVCRRRLVVLA
Trigger: GGCGAGGACCACCAACCGACGGCGACAAACCTGCTCCCTCACCCAGCGCCTCCCTTCGCCGCCGCCCGGCGGCCGACTGCCGGAGGGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS GCA 90 bp CCCCCAATCGCGCTGCCCTCCAGAGGACGGCGGCGATGGACCCTCTaGAGCTCCCTCCGGGCAAAGGTCCAGGCGGTGGCCGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: PPIALPSRGRRRWTL*SSLRAKVQAVAVAA
Trigger: CGCCGCCACGGCCACCGCCTGGACCTTTGCCCGGAGGGAGCTGCAGAGGGTCCATCGCCGCCGTCCTCTGGAGGGCAGCGCGATTGGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS CCA 90 bp GGACCCTCTGCAGCTCCCTCCGGGCAAAGGTCCAGGCGGTGGCCGTaGCGGCGGCAAGATGAAGCTCAAGAGTCTCCCTCCGCTTCGGCG +
Preference number: 5 (lower is better)
Translates to: GPSAAPSGQRSRRWP*RRQDEAQESPSASA
Trigger: CGCCGAAGCGGAGGGAGACTCTTGAGCTTCATCTTGCCGCCGCCACGGCCACCGCCTGGACCTTTGCCCGGAGGGAGCTGCAGAGGGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000418304.1
ENST00000466653.1
ENST00000491632.5
CDS TCA 90 bp TCCCTCCGGGCAAAGGTCCAGGCGGTGGCCGTGGCGGCGGCAAGATaGAGCTCAAGAGTCTCCCTCCGCTTCGGCGACCGAGCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: SLRAKVQAVAVAAAR*SSRVSLRFGDRAPH
Trigger: GTGAGGAGCTCGGTCGCCGAAGCGGAGGGAGACTCTTGAGCTTCATCTTGCCGCCGCCACGGCCACCGCCTGGACCTTTGCCCGGAGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000418304.1
ENST00000466653.1
ENST00000491632.5
CDS CCA 90 bp GGCGATGGACCCTCTGCAGCTCCCTCCGGGCAAAGGTCCAGGCGGTaGCCGTGGCGGCGGCAAGATGAAGCTCAAGAGTCTCCCTCCGCT +
Preference number: 5 (lower is better)
Translates to: GDGPSAAPSGQRSRR*PWRRQDEAQESPSA
Trigger: AGCGGAGGGAGACTCTTGAGCTTCATCTTGCCGCCGCCACGGCCACCGCCTGGACCTTTGCCCGGAGGGAGCTGCAGAGGGTCCATCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000418304.1
ENST00000466653.1
ENST00000491632.5
CDS GCA 90 bp TCCCTTCCAAGGCCATTCTTACTCCAAAGACTCCCAGACTGCAGCTaGGCGCCAGCTCGCACTTCCGGGTTCCGGGCACTTCCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SLPRPFLLQRLPDCS*APARTSGFRALPLS
Trigger: AGAGAGCGGAAGTGCCCGGAACCCGGAAGTGCGAGCTGGCGCGCAGCTGCAGTCTGGGAGTCTTTGGAGTAAGAATGGCCTTGGAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS CCA 90 bp CCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTCCTaGAAGAGCAGCAGGAGGTCAGTGTGGGGCACTGCCTTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: PAASKGQAVEVAGVS*KSSRRSVWGTAFSL
Trigger: AAGGGAAAAGGCAGTGCCCCACACTGACCTCCTGCTGCTCTTCCAGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp AGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCCCAAAATGCTCAGGGTaGGTGAGTGGGAGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SAAKPAASKGQAVEVAGVPKCSG*VSGSWS
Trigger: AGACCAGCTCCCACTCACCAACCCTGAGCATTTTGG...GACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACGGCGACTGGTACCTTaGTTTGGCGGCCGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTRRLVP*FGGRSG
Trigger: GCCCGAGCGGCCGCCAAACAAAGGTACCAGTCGCCG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCGGCGACTGGTACCTTaGTTTGGCGGCCGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLRRLVP*FGGRSG
Trigger: GCCCGAGCGGCCGCCAAACAAAGGTACCAGTCGCCG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGACTGGTACCTTTGTTaGGCGGCCGCTCGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFDWYLC*AAARAP
Trigger: GGGAGCCCGAGCGGCCGCCAAACAAAGGTACCAGTC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CAA 90 bp CTGAAGAGGGACGCCAGCCGACCGGTGCCACCTCTGGAATGGTGTTCGCCGCGAGGTTTACTATCGACATaGACTGGAGGTGGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: LKRDASRPVPPLEWCSPRGLLST*TGGGFS
Trigger: AGAAAAACCACCTCCAGTCAATGTCGATAGTAAACC...TCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp GCCTGGAAGTCATATGGGCTCAGCAGAACCTCGGGGAGCTGGCCGAATAACCCTCTGGAGACTGCGTCCTaGCGGGAGATTTGGTACTAT +
Preference number: 5 (lower is better)
Translates to: AWKSYGLSRTSGSWPNNPLETAS*REIWYY
Trigger: ATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAG...AGGGTTATTCGGCCAGCTCCCCGAGGTTCTGCTGAGCCCATATGACTTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS TCA 90 bp CCGTCCCCATTGTCGAGACCCGACGGAGTTTCCCGTCTACGACAATaGCGCCATTTCTGTCAGAGAAGAAACTCACAACAAGCCCGGCGT +
Preference number: 5 (lower is better)
Translates to: PSPLSRPDGVSRLRQ*RHFCQRRNSQQARR
Trigger: ACGCCGGGCTTGTTGTGAGTTTCTTCTCTGACAGAAATGGCGTCATTGTCGTAGACGGGAAACTCCGTCGGGTCTCGACAATGGGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366603.6
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTGACTGGTACCTTTGTTaGGCGGCCGCTCGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSDWYLC*AAARAP
Trigger: GGGAGCCCGAGCGGCCGCCAAACAAAGGTACCAGTC...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
CDS-3UTR CAA 90 bp GTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTTTTGCTGTCTTGATCTaGGCTTCACAAAAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: VQPSRLLAKVRQWRWQESFAVLI*ASQKAP
Trigger: AGGAGCCTTTTGTGAAGCCAAGATCAAGACAGCAAA...AGACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAAGCTTCCCGTCCCCATaGTCGAGACCCGACGGAGTT +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSFPSP*SRPDGV
Trigger: AACTCCGTCGGGTCTCGACAATGGGGACGGGAAGCT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366603.6
CDS-3UTR CAA 90 bp AGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCCACTATCACTACTATTaGCGCCTGGAAGTCATATGG +
Preference number: 5 (lower is better)
Translates to: SAAKPAASKGQAVEVAGVHYHYY*RLEVIW
Trigger: CCATATGACTTCCAGGCGCAAATAGTAGTGATAGTG...GACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp GCCTGGAAGTCATATGGGCTCAGCAGAACCTCGGGGAGCTGGCCGAATAACCCTGAACCTCTTCTTGGTTaGGAGCCAGTGGTTCTGATA +
Preference number: 5 (lower is better)
Translates to: AWKSYGLSRTSGSWPNNPEPLLG*EPVVLI
Trigger: TATCAGAACCACTGGCTCCAAACCAAGAAGAGGTTC...AGGGTTATTCGGCCAGCTCCCCGAGGTTCTGCTGAGCCCATATGACTTCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS CCA 90 bp CTCACACTGGCATCAAAACCTGCTGGCGAGCTATTCCCTTCAGACTaGAGGTCTTGGAGCTCCCCAGCAACACTATCCACCTCAATTGTG +
Preference number: 5 (lower is better)
Translates to: LTLASKPAGELFPSD*RSWSSPATLSTSIV
Trigger: CACAATTGAGGTGGATAGTGTTGCTGGGGAGCTCCAAGACCTCCAGTCTGAAGGGAATAGCTCGCCAGCAGGTTTTGATGCCAGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS-3UTR CAA 90 bp AGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCAGTCTTTTTGCTGTCTaGATCTTGGCTTCACAAAAG +
Preference number: 5 (lower is better)
Translates to: SAAKPAASKGQAVEVAGVSLFAV*ILASQK
Trigger: CTTTTGTGAAGCCAAGATCAAGACAGCAAAAAGACT...GACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACCAAAATGCTCAGGGTaGGTGAGTGGGAGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRPKCSG*VSGSWS
Trigger: AGACCAGCTCCCACTCACCAACCCTGAGCATTTTGG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATCGTCCATACCGCACTaGGACTTTCATGCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSSIPH*DFHAWW
Trigger: CCACCAGGCATGAAAGTCCAAGTGCGGTATGGACGA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp AGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCATTATTATCCATGTCTaGAGCACCTCTCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: SAAKPAASKGQAVEVAGVIIIHV*STSLIF
Trigger: GAAGATGAGAGAGGTGCTCAAGACATGGATAATAAT...GACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATTCAGACTGGAGGTCTaGGAGCTCCCCAGCAACACT +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTFRLEV*ELPSNT
Trigger: AGTGTTGCTGGGGAGCTCCAAGACCTCCAGTCTGAA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTCTCTTCCGTTTGCTCTGGAGACTGCGTCCTaGCGGGAGATTTGGTACTAT +
Preference number: 5 (lower is better)
Translates to: AVVRILSLLDTSLSLPFALETAS*REIWYY
Trigger: ATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAG...AGCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp GGACTCCCGCGAACGCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTCGATTACTGGGTTCCTaGAGATCAGGATCCTTATCA +
Preference number: 5 (lower is better)
Translates to: GLPRTPSSGFSPSWTLLFRLLGS*RSGSLS
Trigger: TGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG...AAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp CTGACATTCCATTTTGTGATGCGCTGGACATTGACGGTTCAGCTAAAGTTAACAGACTGGTACCTTTGTTaGGCGGCCGCTCGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LTFHFVMRWTLTVQLKLTDWYLC*AAARAP
Trigger: GGGAGCCCGAGCGGCCGCCAAACAAAGGTACCAGTC...TGTTAACTTTAGCTGAACCGTCAATGTCCAGCGCATCACAAAATGGAATGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCCAAAATGCTCAGGGTaGGTGAGTGGGAGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFPKCSG*VSGSWS
Trigger: AGACCAGCTCCCACTCACCAACCCTGAGCATTTTGG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp AGTGCAGCCAAGCCGGCTGCTAGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCGTTGTGTCATCATCTTaGTCATCCAGATTTTCATTG +
Preference number: 5 (lower is better)
Translates to: SAAKPAASKGQAVEVAGVVVSSS*SSRFSL
Trigger: CAATGAAAATCTGGATGACAAAGATGATGACACAAC...GACTCCTGCCACCTCCACTGCCTGACCTTTGCTAGCAGCCGGCTTGGCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTCGTCCATACCGCACTaGGACTTTCATGCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLSSIPH*DFHAWW
Trigger: CCACCAGGCATGAAAGTCCAAGTGCGGTATGGACGA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCCTGGAAGTCATATGGGCTCAGCAGAACCTCGGGGAGCTGGCCGAATAACCCTCACTATCCACCTCAATaGTGCTATCAGTTTCACTCT +
Preference number: 5 (lower is better)
Translates to: AWKSYGLSRTSGSWPNNPHYPPQ*CYQFHS
Trigger: AGAGTGAAACTGATAGCACAATTGAGGTGGATAGTG...AGGGTTATTCGGCCAGCTCCCCGAGGTTCTGCTGAGCCCATATGACTTCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAAGTCCTGCTGTCACCTGCACTCAACTGACATTCCATTTTGTGATGCGCTGGGTGAAAAGCCTCCATTaGCCACAGTGGAAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: ASPAVTCTQLTFHFVMRWVKSLH*PQWKAF
Trigger: GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCAC...CCAGCGCATCACAAAATGGAATGTCAGTTGAGTGCAGGTGACAGCAGGACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS CCA 90 bp GCATCAAAACCTGCTGGCGAGCTATTCCCTTCAGACTGGAGGTCTTaGAGCTCCCCAGCAACACTATCCACCTCAATTGTGCTATCAGTT +
Preference number: 5 (lower is better)
Translates to: ASKPAGELFPSDWRS*SSPATLSTSIVLSV
Trigger: AACTGATAGCACAATTGAGGTGGATAGTGTTGCTGGGGAGCTCCAAGACCTCCAGTCTGAAGGGAATAGCTCGCCAGCAGGTTTTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS CCA 90 bp CAGGATGTTCTGGTTCTGGCTGATTACTACTGCTTGAGCTCACACTaGCATCAAAACCTGCTGGCGAGCTATTCCCTTCAGACTGGAGGT +
Preference number: 5 (lower is better)
Translates to: QDVLVLADYYCLSSH*HQNLLASYSLQTGG
Trigger: ACCTCCAGTCTGAAGGGAATAGCTCGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCCAAAATGCTCAGGGTaGGTGAGTGGGAGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSPKCSG*VSGSWS
Trigger: AGACCAGCTCCCACTCACCAACCCTGAGCATTTTGG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GGACTCCCGCGAACGCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTATTATTATCCATGTCTaGAGCACCTCTCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: GLPRTPSSGFSPSWTLLFIIIHV*STSLIF
Trigger: GAAGATGAGAGAGGTGCTCAAGACATGGATAATAAT...AAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAACTTCGAACCTCTTCTaGGTTTGGAGCCAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTTSNLF*VWSQWF
Trigger: GAACCACTGGCTCCAAACCAAGAAGAGGTTCGAAGT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTTCAGACTGGAGGTCTaGGAGCTCCCCAGCAACACT +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSFRLEV*ELPSNT
Trigger: AGTGTTGCTGGGGAGCTCCAAGACCTCCAGTCTGAA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCTGGAGACTGCGTCCTaGCGGGAGATTTGGTACTAT +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFLETAS*REIWYY
Trigger: ATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS GCA 90 bp TCTTGGTTTGGAGCCAGTGGTTCTGATACTGTTACAGAAGACTGCTaGCGGCTGCCTTCTGTTACAGTGACTGATGAAGGCGATTCAGGT +
Preference number: 5 (lower is better)
Translates to: SWFGASGSDTVTEDC*RLPSVTVTDEGDSG
Trigger: ACCTGAATCGCCTTCATCAGTCACTGTAACAGAAGGCAGCCGGCAGCAGTCTTCTGTAACAGTATCAGAACCACTGGCTCCAAACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS-3UTR CAA 90 bp CGCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTCTCTTCCGTTTGCTCATCTGAAGAGCTGTaGCTACTGTTTTCCATGCAA +
Preference number: 5 (lower is better)
Translates to: RRRQDSLPPGHFSFSSVCSSEEL*LLFSMQ
Trigger: TTGCATGGAAAACAGTAGCAACAGCTCTTCAGATGA...GCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCACTTCGAACCTCTTCTaGGTTTGGAGCCAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFTSNLF*VWSQWF
Trigger: GAACCACTGGCTCCAAACCAAGAAGAGGTTCGAAGT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAGCTGATTACTACTGCTaGAGCTCACACTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRADYYC*SSHWHQ
Trigger: TTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGC...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAAGTCCTGCTGTCACCTGCACTCAACTGACATTCCATTTTGTGATGCGCTGGGCTGATTACTACTGCTaGAGCTCACACTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: ASPAVTCTQLTFHFVMRWADYYC*SSHWHQ
Trigger: TTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGC...CCAGCGCATCACAAAATGGAATGTCAGTTGAGTGCAGGTGACAGCAGGACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCTGGAGACTGCGTCCTaGCGGGAGATTTGGTACTAT +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSLETAS*REIWYY
Trigger: ATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAGTGATGCGCTGGACATaGACGGTTCAGCTAAAGTTA +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTVMRWT*TVQLKL
Trigger: TAACTTTAGCTGAACCGTCAATGTCCAGCGCATCAC...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS TCA 90 bp ACAGGCTTTTTCAGGATGTTCTGGTTCTGGCTGATTACTACTGCTTaGGCTCACACTGGCATCAAAACCTGCTGGCGAGCTATTCCCTTC +
Preference number: 5 (lower is better)
Translates to: TGFFRMFWFWLITTA*AHTGIKTCWRAIPF
Trigger: GAAGGGAATAGCTCGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACATCCTGAAAAAGCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000474953.5
ENST00000491632.5
CDS TCA 90 bp CTCACCTTTTTCAGGATGTTCTGGTTCTGGCTGATTACTACTGCTTaGGCTCACACTGGCATCAAAACCTGCTGGCGAGCTATTCCCTTC +
Preference number: 5 (lower is better)
Translates to: LTFFRMFWFWLITTA*AHTGIKTCWRAIPF
Trigger: GAAGGGAATAGCTCGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACATCCTGAAAAAGGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471257.5
CDS TCA 90 bp CAGGACAAGTTAGTCAGGCTTGAAAATCAGTTTGACACGGTTGTCTaGGGAAAGCAGTGCCTGGACAGTTGGTTGCTCCAAACCCCTACA +
Preference number: 5 (lower is better)
Translates to: QDKLVRLENQFDTVV*GKQCLDSWLLQTPT
Trigger: TGTAGGGGTTTGGAGCAACCAACTGTCCAGGCACTGCTTTCCTCAGACAACCGTGTCAAACTGATTTTCAAGCCTGACTAACTTGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494543.1
CDS GCA 90 bp TCTTCTTGGTTTGGAGCCAGTGGTTCTGATACTGTTACAGAAGACTaGTGCCGGCTGCCTTCTGTTACAGTGACTGATGAAGGCGATTCA +
Preference number: 5 (lower is better)
Translates to: SSWFGASGSDTVTED*CRLPSVTVTDEGDS
Trigger: TGAATCGCCTTCATCAGTCACTGTAACAGAAGGCAGCCGGCAGCAGTCTTCTGTAACAGTATCAGAACCACTGGCTCCAAACCAAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS GCA 90 bp CTGTACAGGCTTTTTCAGGATGTTCTGGTTCTGGCTGATTACTACTaGTTGAGCTCACACTGGCATCAAAACCTGCTGGCGAGCTATTCC +
Preference number: 5 (lower is better)
Translates to: LYRLFQDVLVLADYY*LSSHWHQNLLASYS
Trigger: GGAATAGCTCGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACATCCTGAAAAAGCCTGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000474953.5
ENST00000491632.5
CDS GCA 90 bp CCTTCTCACCTTTTTCAGGATGTTCTGGTTCTGGCTGATTACTACTaGTTGAGCTCACACTGGCATCAAAACCTGCTGGCGAGCTATTCC +
Preference number: 5 (lower is better)
Translates to: PSHLFQDVLVLADYY*LSSHWHQNLLASYS
Trigger: GGAATAGCTCGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACATCCTGAAAAAGGTGAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471257.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATTTGCTGTCTTGATCTaGGCTTCACAAAAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRFAVLI*ASQKAP
Trigger: AGGAGCCTTTTGTGAAGCCAAGATCAAGACAGCAAA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTCGTCCATACCGCACTaGGACTTTCATGCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHSSIPH*DFHAWW
Trigger: CCACCAGGCATGAAAGTCCAAGTGCGGTATGGACGA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264183.9
ENST00000366603.6
CDS-3UTR CAA 90 bp GCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTCTCTTCCGTTTGCTACTGTCCCTGAATACTaGACCAGACATCTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: AVVRILSLLDTSLSLPFATVPEY*TRHLFD
Trigger: ATCGAAAAGATGTCTGGTCAAGTATTCAGGGACAGT...AGCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGGAACCTCTTCTTGGTTaGGAGCCAGTGGTTCTGATA +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLEPLLG*EPVVLI
Trigger: TATCAGAACCACTGGCTCCAAACCAAGAAGAGGTTC...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGAACCTCTTCTTGGTTaGGAGCCAGTGGTTCTGATA +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFEPLLG*EPVVLI
Trigger: TATCAGAACCACTGGCTCCAAACCAAGAAGAGGTTC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTTCAGACTGGAGGTCTaGGAGCTCCCCAGCAACACT +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHFRLEV*ELPSNT
Trigger: AGTGTTGCTGGGGAGCTCCAAGACCTCCAGTCTGAA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp TGCGTTCGGCACTTGTCATATTTTCCAGGTCCGACATCTGAAAACTCCATTTGTTTCAGACTGGAGGTCTaGGAGCTCCCCAGCAACACT +
Preference number: 5 (lower is better)
Translates to: CVRHLSYFPGPTSENSICFRLEV*ELPSNT
Trigger: AGTGTTGCTGGGGAGCTCCAAGACCTCCAGTCTGAA...ACAAATGGAGTTTTCAGATGTCGGACCTGGAAAATATGACAAGTGCCGAACGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp CTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTGCGTGTTCAGACTGGAGGTCTaGGAGCTCCCCAGCAACACT +
Preference number: 5 (lower is better)
Translates to: LIRNPSAIWAPFLFNACVFRLEV*ELPSNT
Trigger: AGTGTTGCTGGGGAGCTCCAAGACCTCCAGTCTGAA...CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGCTGATTACTACTGCTaGAGCTCACACTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFADYYC*SSHWHQ
Trigger: TTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACGATTACTGGGTTCCTaGAGATCAGGATCCTTATCA +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTRLLGS*RSGSLS
Trigger: TGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS TCA 90 bp TCACACAAGTTAGTCAGGCTTGAAAATCAGTTTGACACGGTTGTCTaGGGAAAGCAGTGCCTGGACAGTTGGTTGCTCCAAACCCCTACA +
Preference number: 5 (lower is better)
Translates to: SHKLVRLENQFDTVV*GKQCLDSWLLQTPT
Trigger: TGTAGGGGTTTGGAGCAACCAACTGTCCAGGCACTGCTTTCCTCAGACAACCGTGTCAAACTGATTTTCAAGCCTGACTAACTTGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471257.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTTTGCTGTCTTGATCTaGGCTTCACAAAAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFFAVLI*ASQKAP
Trigger: AGGAGCCTTTTGTGAAGCCAAGATCAAGACAGCAAA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAAGTCCTGCTGTCACCTGCACTCAACTGACATTCCATTTTGTGATGCGCTGGAAGATCTTGGTAGACTaGTTTCCAAACAGCTCCACT +
Preference number: 5 (lower is better)
Translates to: ASPAVTCTQLTFHFVMRWKILVD*FPNSST
Trigger: AGTGGAGCTGTTTGGAAACAAGTCTACCAAGATCTT...CCAGCGCATCACAAAATGGAATGTCAGTTGAGTGCAGGTGACAGCAGGACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAAGGGATTCCAAGATCTaGGTAGACTTGTTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTRDSKI*VDLFPN
Trigger: GTTTGGAAACAAGTCTACCAAGATCTTGGAATCCCT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACTCCTTACATTGCTaGTTAACAACTTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRHSLHC*LTTFSG
Trigger: GCCAGAGAAAGTTGTTAACAAGCAATGTAAGGAGTG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATCAGTGAGATCCAGTTaGGATACCATTTCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSVRSS*DTISGD
Trigger: ATCTCCTGAAATGGTATCCAAACTGGATCTCACTGA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCCGTCGTCAGGATTCTCTCCCTCCTGGACACTTCTCTTTCTCTTCCGTTTGCTAGAACTTTCAGAAGCTaGAAGTCCATTAAGGATCGA +
Preference number: 5 (lower is better)
Translates to: AVVRILSLLDTSLSLPFARTFRS*KSIKDR
Trigger: TCGATCCTTAATGGACTTCAAGCTTCTGAAAGTTCT...AGCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGCCTTCTCTTCCTTTTaGCCAGGTGATCCAGTTTTT +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFAFSSF*PGDPVF
Trigger: AAAAACTGGATCACCTGGCAAAAAGGAAGAGAAGGC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATCATCTGAAGAGCTGTaGCTACTGTTTTCCATGCAA +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSSEEL*LLFSMQ
Trigger: TTGCATGGAAAACAGTAGCAACAGCTCTTCAGATGA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATTTGGCCCTGCTGTTTaGAAGTCTTTCATCAGAGTT +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRFGPAV*KSFIRV
Trigger: AACTCTGATGAAAGACTTCAAAACAGCAGGGCCAAA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATTTGGCCCTGCTGTTTaGAAGTCTTTCATCAGAGTT +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTFGPAV*KSFIRV
Trigger: AACTCTGATGAAAGACTTCAAAACAGCAGGGCCAAA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAACTGTCCCTGAATACTaGACCAGACATCTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRTVPEY*TRHLFD
Trigger: ATCGAAAAGATGTCTGGTCAAGTATTCAGGGACAGT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAGGTTTACTATCGACATaGACTGGAGGTGGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTGLLST*TGGGFS
Trigger: AGAAAAACCACCTCCAGTCAATGTCGATAGTAAACC...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACACTATCCACCTCAATaGTGCTATCAGTTTCACTCT +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTHYPPQ*CYQFHS
Trigger: AGAGTGAAACTGATAGCACAATTGAGGTGGATAGTG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCTGGAGACTGCGTCCTaGCGGGAGATTTGGTACTAT +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLETAS*REIWYY
Trigger: ATAGTACCAAATCTCCCGCAAGGACGCAGTCTCCAG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCGATTACTGGGTTCCTaGAGATCAGGATCCTTATCA +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLRLLGS*RSGSLS
Trigger: TGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAAGTCTTTTTGCTGTCTaGATCTTGGCTTCACAAAAG +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRSLFAV*ILASQK
Trigger: CTTTTGTGAAGCCAAGATCAAGACAGCAAAAAGACT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAAGTCTTTTTGCTGTCTaGATCTTGGCTTCACAAAAG +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSLFAV*ILASQK
Trigger: CTTTTGTGAAGCCAAGATCAAGACAGCAAAAAGACT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAAATGTCACCTTGACTTaGACAAGTCTTTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRNVTLT*TSLFAV
Trigger: GACAGCAAAAAGACTTGTCAAAGTCAAGGTGACATT...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATCTACACATACAACTTaGCCTAGTAGCTCATCAATC +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRSTHTT*PSSSSI
Trigger: GATTGATGAGCTACTAGGCAAAGTTGTATGTGTAGA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCCAAGTACAGGTCGTTaGTTAATAGGTGTACCTCTA +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLPSTGR*LIGVPL
Trigger: TAGAGGTACACCTATTAACAAACGACCTGTACTTGG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCAAGATCTTGGTAGACTaGTTTCCAAACAGCTCCACT +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFKILVD*FPNSST
Trigger: AGTGGAGCTGTTTGGAAACAAGTCTACCAAGATCTT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCAGGGATTCCAAGATCTaGGTAGACTTGTTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFRDSKI*VDLFPN
Trigger: GTTTGGAAACAAGTCTACCAAGATCTTGGAATCCCT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTCAGTGAGATCCAGTTaGGATACCATTTCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFSVRSS*DTISGD
Trigger: ATCTCCTGAAATGGTATCCAAACTGGATCTCACTGA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTCAGTGAGATCCAGTTaGGATACCATTTCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLSVRSS*DTISGD
Trigger: ATCTCCTGAAATGGTATCCAAACTGGATCTCACTGA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAATTATTATCCATGTCTaGAGCACCTCTCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTIIIHV*STSLIF
Trigger: GAAGATGAGAGAGGTGCTCAAGACATGGATAATAAT...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTGCCTTCTCTTCCTTTTaGCCAGGTGATCCAGTTTTT +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSAFSSF*PGDPVF
Trigger: AAAAACTGGATCACCTGGCAAAAAGGAAGAGAAGGC...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTCATCTGAAGAGCTGTaGCTACTGTTTTCCATGCAA +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFSSEEL*LLFSMQ
Trigger: TTGCATGGAAAACAGTAGCAACAGCTCTTCAGATGA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTCATCTGAAGAGCTGTaGCTACTGTTTTCCATGCAA +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLSSEEL*LLFSMQ
Trigger: TTGCATGGAAAACAGTAGCAACAGCTCTTCAGATGA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCACTGTCCCTGAATACTaGACCAGACATCTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFTVPEY*TRHLFD
Trigger: ATCGAAAAGATGTCTGGTCAAGTATTCAGGGACAGT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGGTTTACTATCGACATaGACTGGAGGTGGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFGLLST*TGGGFS
Trigger: AGAAAAACCACCTCCAGTCAATGTCGATAGTAAACC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACTATCAGTTTCACTCTaGATACTTCGAACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRLSVSL*ILRTSS
Trigger: AGAAGAGGTTCGAAGTATCAAGAGTGAAACTGATAG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCACTATCCACCTCAATaGTGCTATCAGTTTCACTCT +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFHYPPQ*CYQFHS
Trigger: AGAGTGAAACTGATAGCACAATTGAGGTGGATAGTG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACTACAACAAAACGCATaGAAATTCCCACGTCGTATT +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTLQQNA*KFPRRI
Trigger: AATACGACGTGGGAATTTCAATGCGTTTTGTTGTAG...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp GCAGTTTTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATGGTGAGGGAGCAGGTTaGTCGCCGTCGGTTGGTGGT +
Preference number: 5 (lower is better)
Translates to: AVLEVKLSPCLGLLTFFNGEGAG*SPSVGG
Trigger: ACCACCAACCGACGGCGACAAACCTGCTCCCTCACC...ATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS TCA 90 bp CCCCAGCAACACTATCCACCTCAATTGTGCTATCAGTTTCACTCTTaGTACTTCGAACCTCTTCTTGGTTTGGAGCCAGTGGTTCTGATA +
Preference number: 5 (lower is better)
Translates to: PQQHYPPQLCYQFHS*YFEPLLGLEPVVLI
Trigger: TATCAGAACCACTGGCTCCAAACCAAGAAGAGGTTCGAAGTATCAAGAGTGAAACTGATAGCACAATTGAGGTGGATAGTGTTGCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS CCA 90 bp TTGATTTTTCCCTCGTCCATACCGCACTTGGACTTTCATGCCTGGTaGATAGCACTCAAACTCCTCTTCCTCATTGTTGTCATCATCATC +
Preference number: 5 (lower is better)
Translates to: LIFPSSIPHLDFHAW*IALKLLFLIVVIII
Trigger: GATGATGATGACAACAATGAGGAAGAGGAGTTTGAGTGCTATCCACCAGGCATGAAAGTCCAAGTGCGGTATGGACGAGGGAAAAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000366603.6
ENST00000421364.5
ENST00000471257.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCAATGTCACCTTGACTTaGACAAGTCTTTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFNVTLT*TSLFAV
Trigger: GACAGCAAAAAGACTTGTCAAAGTCAAGGTGACATT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTCTACACATACAACTTaGCCTAGTAGCTCATCAATC +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFSTHTT*PSSSSI
Trigger: GATTGATGAGCTACTAGGCAAAGTTGTATGTGTAGA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCCAAGTACAGGTCGTTaGTTAATAGGTGTACCTCTA +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSPSTGR*LIGVPL
Trigger: TAGAGGTACACCTATTAACAAACGACCTGTACTTGG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATCAAATCCTCCAAGTTaGTGTACAAGTCTGAATAAC +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSNPPS*CTSLNN
Trigger: GTTATTCAGACTTGTACACAAACTTGGAGGATTTGA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGATCAAATCCTCCAAGTTaGTGTACAAGTCTGAATAAC +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRSNPPS*CTSLNN
Trigger: GTTATTCAGACTTGTACACAAACTTGGAGGATTTGA...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTAGGGATTCCAAGATCTaGGTAGACTTGTTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSRDSKI*VDLFPN
Trigger: GTTTGGAAACAAGTCTACCAAGATCTTGGAATCCCT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATTCACACTCCTTACATaGCTTGTTAACAACTTTCTC +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTFTLLT*LVNNFL
Trigger: GAGAAAGTTGTTAACAAGCAATGTAAGGAGTGTGAA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGAGTTGTGTCATCATCTTaGTCATCCAGATTTTCATTG +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRVVSSS*SSRFSL
Trigger: CAATGAAAATCTGGATGACAAAGATGATGACACAAC...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATCCGATGTTTTATCTTaGGCACATTTTTATCAGCAG +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTSDVLS*AHFYQQ
Trigger: CTGCTGATAAAAATGTGCCAAAGATAAAACATCGGA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGAGAACTTTCAGAAGCTaGAAGTCCATTAAGGATCGA +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLRTFRS*KSIKDR
Trigger: TCGATCCTTAATGGACTTCAAGCTTCTGAAAGTTCT...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCAGAACTTTCAGAAGCTaGAAGTCCATTAAGGATCGA +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFRTFRS*KSIKDR
Trigger: TCGATCCTTAATGGACTTCAAGCTTCTGAAAGTTCT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACAGATTTTGACACTGGTTaGGATATTACCAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTDFDTG*DITKSA
Trigger: TGCAGATTTGGTAATATCCAAACCAGTGTCAAAATC...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp CCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTTGCGGGAGATTGGTTTACTATCGACATaGACTGGAGGTGGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: PYHHSFHIFLETASLREIGLLST*TGGGFS
Trigger: AGAAAAACCACCTCCAGTCAATGTCGATAGTAAACC...AATCTCCCGCAAGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCTATCAGTTTCACTCTaGATACTTCGAACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFLSVSL*ILRTSS
Trigger: AGAAGAGGTTCGAAGTATCAAGAGTGAAACTGATAG...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCACTATCCACCTCAATaGTGCTATCAGTTTCACTCT +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSHYPPQ*CYQFHS
Trigger: AGAGTGAAACTGATAGCACAATTGAGGTGGATAGTG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATGCTGATTACTACTGCTaGAGCTCACACTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHADYYC*SSHWHQ
Trigger: TTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGC...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp GCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACATGTTGTTTACCACTGTaGCTTTATGGCTTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: AVKSLHLPQWKAFQLPDTCCLPL*LYGFFS
Trigger: AGAAAAGAAGCCATAAAGCAACAGTGGTAAACAACA...TGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACTATCACTACTATTaGTGCCTTTTCCCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: TGSEKPPFATVEGLPVTRHYHYY*CLFPSF
Trigger: AAAAGAAGGGAAAAGGCACAAATAGTAGTGATAGTG...TCTGGTAACTGGAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATGTGATGCGCTGGACATaGACGGTTCAGCTAAAGTTA +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHVMRWT*TVQLKL
Trigger: TAACTTTAGCTGAACCGTCAATGTCCAGCGCATCAC...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGACTATGCTTACTGTATaGTCTCTACAGGCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLTMLTV*SLQAVK
Trigger: TTTCACTGCCTGTAGAGACAATACAGTAAGCATAGT...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCATAACCACCATCCTTTaGAGACAGTTCCTATCAACA +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFITTIL*RQFLST
Trigger: TGTTGATAGGAACTGTCTCAAAAGGATGGTGGTTAT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTAATTCCCACGTCGTATaGCCAGGAAACAAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSNSHVV*PGNKEN
Trigger: GTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp TTAAGGAGAACAGCTTTTTCTCCAATAAATAAGCTTTTAGGATGTCCTTCTGCAGTTTGTCGCCGTCGGTaGGTGGTCCTCGCCGTTTCA +
Preference number: 5 (lower is better)
Translates to: LRRTAFSPINKLLGCPSAVCRRR*VVLAVS
Trigger: TGAAACGGCGAGGACCACCAACCGACGGCGACAAAC...TGCAGAAGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGTTCTCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS CCA 90 bp TTTTTGATTTTTCCCTCGTCCATACCGCACTTGGACTTTCATGCCTaGTGGATAGCACTCAAACTCCTCTTCCTCATTGTTGTCATCATC +
Preference number: 5 (lower is better)
Translates to: FLIFPSSIPHLDFHA*WIALKLLFLIVVII
Trigger: GATGATGACAACAATGAGGAAGAGGAGTTTGAGTGCTATCCACCAGGCATGAAAGTCCAAGTGCGGTATGGACGAGGGAAAAATCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000366603.6
ENST00000421364.5
ENST00000471257.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTAGTCTTTTTGCTGTCTaGATCTTGGCTTCACAAAAG +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSSLFAV*ILASQK
Trigger: CTTTTGTGAAGCCAAGATCAAGACAGCAAAAAGACT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTCAAATCCTCCAAGTTaGTGTACAAGTCTGAATAAC +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFSNPPS*CTSLNN
Trigger: GTTATTCAGACTTGTACACAAACTTGGAGGATTTGA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTTCACACTCCTTACATaGCTTGTTAACAACTTTCTC +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLFTLLT*LVNNFL
Trigger: GAGAAAGTTGTTAACAAGCAATGTAAGGAGTGTGAA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGGTTGTGTCATCATCTTaGTCATCCAGATTTTCATTG +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLVVSSS*SSRFSL
Trigger: CAATGAAAATCTGGATGACAAAGATGATGACACAAC...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCGTTGTGTCATCATCTTaGTCATCCAGATTTTCATTG +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFVVSSS*SSRFSL
Trigger: CAATGAAAATCTGGATGACAAAGATGATGACACAAC...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCTCCGATGTTTTATCTTaGGCACATTTTTATCAGCAG +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFSDVLS*AHFYQQ
Trigger: CTGCTGATAAAAATGTGCCAAAGATAAAACATCGGA...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTAGAACTTTCAGAAGCTaGAAGTCCATTAAGGATCGA +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSRTFRS*KSIKDR
Trigger: TCGATCCTTAATGGACTTCAAGCTTCTGAAAGTTCT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GTATTGTCTCTACAGGCAGTGAAAAGCCTCCATTTGCCACAGTGGAAGGCCTTCAGACACTCTTCTGTATaGCAATACCTTCTTTTACCA +
Preference number: 5 (lower is better)
Translates to: VLSLQAVKSLHLPQWKAFRHSSV*QYLLLP
Trigger: TGGTAAAAGAAGGTATTGCAATACAGAAGAGTGTCT...GAAGGCCTTCCACTGTGGCAAATGGAGGCTTTTCACTGCCTGTAGAGACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTACTGTCCCTGAATACTaGACCAGACATCTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: EIRILITILSTFSWRLRPTVPEY*TRHLFD
Trigger: ATCGAAAAGATGTCTGGTCAAGTATTCAGGGACAGT...AGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTGTTGTTTACCACTGTaGCTTTATGGCTTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLCCLPL*LYGFFS
Trigger: AGAAAAGAAGCCATAAAGCAACAGTGGTAAACAACA...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGCACTATCACTACTATTaGTGCCTTTTCCCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLHYHYY*CLFPSF
Trigger: AAAAGAAGGGAAAAGGCACAAATAGTAGTGATAGTG...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp TTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGAGTTGGAAACAATTATaGCTTGAGGAAAAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LPQWKAFQLPDTQFPDKLSWKQL*LEEKQF
Trigger: GAACTGCTTTTCCTCAAGCAATAATTGTTTCCAACT...CAACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTATAACCACCATCCTTTaGAGACAGTTCCTATCAACA +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSITTIL*RQFLST
Trigger: TGTTGATAGGAACTGTCTCAAAAGGATGGTGGTTAT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS TCA 90 bp TCCACAATAGCTCCTACCTTTAGTGGGCCCTTTATGTGGTCATCCTaGACTTCCACTGTTGAAGAATCATGTCTAAATGTCACCTTGACT +
Preference number: 5 (lower is better)
Translates to: STIAPTFSGPFMWSS*TSTVEESCLNVTLT
Trigger: AGTCAAGGTGACATTTAGACATGATTCTTCAACAGTGGAAGTTCAGGATGACCACATAAAGGGCCCACTAAAGGTAGGAGCTATTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS GCA 90 bp CTTCTTCCTCTATTTGTTTTCTTTCCTATGACTGGAGTGCCAAAATaGTCAGGGTTGGTGAGTGGGAGCTGGTCTAATGTTTCACTTTCA +
Preference number: 5 (lower is better)
Translates to: LLPLFVFFPMTGVPK*SGLVSGSWSNVSLS
Trigger: TGAAAGTGAAACATTAGACCAGCTCCCACTCACCAACCCTGAGCATTTTGGCACTCCAGTCATAGGAAAGAAAACAAATAGAGGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS CCA 90 bp GTTTTTGGCATCAGTGAGATCCAGTTTGGATACCATTTCAGGAGATaGATTTGTCTGAAATGGTGGTTTGGACAAGCGCCGAAGTTTACA +
Preference number: 5 (lower is better)
Translates to: VFGISEIQFGYHFRR*ICLKWWFGQAPKFT
Trigger: TGTAAACTTCGGCGCTTGTCCAAACCACCATTTCAGACAAATCCATCTCCTGAAATGGTATCCAAACTGGATCTCACTGATGCCAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000491632.5
CDS CCA 90 bp TCAATTGTGCTATCAGTTTCACTCTTGATACTTCGAACCTCTTCTTaGTTTGGAGCCAGTGGTTCTGATACTGTTACAGAAGACTGCTGC +
Preference number: 5 (lower is better)
Translates to: SIVLSVSLLILRTSS*FGASGSDTVTEDCC
Trigger: GCAGCAGTCTTCTGTAACAGTATCAGAACCACTGGCTCCAAACCAAGAAGAGGTTCGAAGTATCAAGAGTGAAACTGATAGCACAATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTCAAATCCTCCAAGTTaGTGTACAAGTCTGAATAAC +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSSNPPS*CTSLNN
Trigger: GTTATTCAGACTTGTACACAAACTTGGAGGATTTGA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATAAGATCTTGGTAGACTaGTTTCCAAACAGCTCCACT +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHKILVD*FPNSST
Trigger: AGTGGAGCTGTTTGGAAACAAGTCTACCAAGATCTT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATAGGGATTCCAAGATCTaGGTAGACTTGTTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHRDSKI*VDLFPN
Trigger: GTTTGGAAACAAGTCTACCAAGATCTTGGAATCCCT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCACTCCTTACATTGCTaGTTAACAACTTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHHSLHC*LTTFSG
Trigger: GCCAGAGAAAGTTGTTAACAAGCAATGTAAGGAGTG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTCCGATGTTTTATCTTaGGCACATTTTTATCAGCAG +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSSDVLS*AHFYQQ
Trigger: CTGCTGATAAAAATGTGCCAAAGATAAAACATCGGA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp CAGCTGAAAGTTCTTCACTATCACTACTATTTGCGCCTGGAAGTCATATGGGCTTCAGTGAGATCCAGTTaGGATACCATTTCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: QLKVLHYHYYLRLEVIWASVRSS*DTISGD
Trigger: ATCTCCTGAAATGGTATCCAAACTGGATCTCACTGA...AGCCCATATGACTTCCAGGCGCAAATAGTAGTGATAGTGAAGAACTTTCAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTGATTTTGACACTGGTTaGGATATTACCAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSDFDTG*DITKSA
Trigger: TGCAGATTTGGTAATATCCAAACCAGTGTCAAAATC...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTTTGGCCCTGCTGTTTaGAAGTCTTTCATCAGAGTT +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHFGPAV*KSFIRV
Trigger: AACTCTGATGAAAGACTTCAAAACAGCAGGGCCAAA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp TGCGTTCGGCACTTGTCATATTTTCCAGGTCCGACATCTGAAAACTCCATTTGTTTTGGCCCTGCTGTTTaGAAGTCTTTCATCAGAGTT +
Preference number: 5 (lower is better)
Translates to: CVRHLSYFPGPTSENSICFGPAV*KSFIRV
Trigger: AACTCTGATGAAAGACTTCAAAACAGCAGGGCCAAA...ACAAATGGAGTTTTCAGATGTCGGACCTGGAAAATATGACAAGTGCCGAACGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp CTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTGCGTGCACTATCCACCTCAATaGTGCTATCAGTTTCACTCT +
Preference number: 5 (lower is better)
Translates to: LIRNPSAIWAPFLFNACVHYPPQ*CYQFHS
Trigger: AGAGTGAAACTGATAGCACAATTGAGGTGGATAGTG...CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTTGTTGTTTACCACTGTaGCTTTATGGCTTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSCCLPL*LYGFFS
Trigger: AGAAAAGAAGCCATAAAGCAACAGTGGTAAACAACA...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTCACTATCACTACTATTaGTGCCTTTTCCCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSHYHYY*CLFPSF
Trigger: AAAAGAAGGGAAAAGGCACAAATAGTAGTGATAGTG...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp CTGACATTCCATTTTGTGATGCGCTGGACATTGACGGTTCAGCTAAAGTTAACACGATTACTGGGTTCCTaGAGATCAGGATCCTTATCA +
Preference number: 5 (lower is better)
Translates to: LTFHFVMRWTLTVQLKLTRLLGS*RSGSLS
Trigger: TGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG...TGTTAACTTTAGCTGAACCGTCAATGTCCAGCGCATCACAAAATGGAATGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp CGATTACTGGGTTCCTTGAGATCAGGATCCTTATCACCATTCTTTCCACATTTTGTGATGCGCTGGACATaGACGGTTCAGCTAAAGTTA +
Preference number: 5 (lower is better)
Translates to: RLLGSLRSGSLSPFFPHFVMRWT*TVQLKL
Trigger: TAACTTTAGCTGAACCGTCAATGTCCAGCGCATCAC...AAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp TCAACTCTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTGTGATGCGCTGGACATaGACGGTTCAGCTAAAGTTA +
Preference number: 5 (lower is better)
Translates to: STLIRNPSAIWAPFLFNAVMRWT*TVQLKL
Trigger: TAACTTTAGCTGAACCGTCAATGTCCAGCGCATCAC...AGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp ATTTGCCACAGTGGAAGGCCTTCCAGTTACCAGACACACAATTCCCAGACAAGTAGTTGGAAACAATTATaGCTTGAGGAAAAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: ICHSGRPSSYQTHNSQTSSWKQL*LEEKQF
Trigger: GAACTGCTTTTCCTCAAGCAATAATTGTTTCCAACT...ACTTGTCTGGGAATTGTGTGTCTGGTAACTGGAAGGCCTTCCACTGTGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
CDS-3UTR CAA 90 bp GAGATCAGGATCCTTATCACCATTCTTTCCACATTTTCCTGGAGACTGCGTCCTACTATGCTTACTGTATaGTCTCTACAGGCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: EIRILITILSTFSWRLRPTMLTV*SLQAVK
Trigger: TTTCACTGCCTGTAGAGACAATACAGTAAGCATAGT...AGGACGCAGTCTCCAGGAAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATAATTCCCACGTCGTATaGCCAGGAAACAAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHNSHVV*PGNKEN
Trigger: GTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp TTGTCTCTAGATGAGGTCTCAGATGCGAGATCAACTCTAATACGAAATCCATCTCAGAAAAGCCTCATTTaGGGAGTGAAGGACGTCTTC +
Preference number: 5 (lower is better)
Translates to: LSLDEVSDARSTLIRNPSQKSLI*GVKDVF
Trigger: GAAGACGTCCTTCACTCCCAAAATGAGGCTTTTCTG...AGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATAATGTCACCTTGACTTaGACAAGTCTTTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHNVTLT*TSLFAV
Trigger: GACAGCAAAAAGACTTGTCAAAGTCAAGGTGACATT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp TGCGTTCGGCACTTGTCATATTTTCCAGGTCCGACATCTGAAAACTCCATTTGTAATGTCACCTTGACTTaGACAAGTCTTTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: CVRHLSYFPGPTSENSICNVTLT*TSLFAV
Trigger: GACAGCAAAAAGACTTGTCAAAGTCAAGGTGACATT...ACAAATGGAGTTTTCAGATGTCGGACCTGGAAAATATGACAAGTGCCGAACGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTCTACACATACAACTTaGCCTAGTAGCTCATCAATC +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHSTHTT*PSSSSI
Trigger: GATTGATGAGCTACTAGGCAAAGTTGTATGTGTAGA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATATTATTATCCATGTCTaGAGCACCTCTCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHIIIHV*STSLIF
Trigger: GAAGATGAGAGAGGTGCTCAAGACATGGATAATAAT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp GCGTCCTTGCGGGAGATTTGGTACTATGAGACTTCATTCCAGTGGAAACTGATTGATTTTGACACTGGTTaGGATATTACCAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: ASLREIWYYETSFQWKLIDFDTG*DITKSA
Trigger: TGCAGATTTGGTAATATCCAAACCAGTGTCAAAATC...AATCAGTTTCCACTGGAATGAAGTCTCATAGTACCAAATCTCCCGCAAGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp CTGACATTCCATTTTGTGATGCGCTGGACATTGACGGTTCAGCTAAAGTTAACATCATCTGAAGAGCTGTaGCTACTGTTTTCCATGCAA +
Preference number: 5 (lower is better)
Translates to: LTFHFVMRWTLTVQLKLTSSEEL*LLFSMQ
Trigger: TTGCATGGAAAACAGTAGCAACAGCTCTTCAGATGA...TGTTAACTTTAGCTGAACCGTCAATGTCCAGCGCATCACAAAATGGAATGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp TTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCGTGGAACTTCGAACCTCTTCTaGGTTTGGAGCCAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LEVKLSPCLGLLTFFNRGTSNLF*VWSQWF
Trigger: GAACCACTGGCTCCAAACCAAGAAGAGGTTCGAAGT...TCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCTATCAGTTTCACTCTaGATACTTCGAACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLSVSL*ILRTSS
Trigger: AGAAGAGGTTCGAAGTATCAAGAGTGAAACTGATAG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp CAGCTGAAAGTTCTTCACTATCACTACTATTTGCGCCTGGAAGTCATATGGGCTCTATCAGTTTCACTCTaGATACTTCGAACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: QLKVLHYHYYLRLEVIWALSVSL*ILRTSS
Trigger: AGAAGAGGTTCGAAGTATCAAGAGTGAAACTGATAG...AGCCCATATGACTTCCAGGCGCAAATAGTAGTGATAGTGAAGAACTTTCAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp CTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTGCGTGCTATCAGTTTCACTCTaGATACTTCGAACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LIRNPSAIWAPFLFNACVLSVSL*ILRTSS
Trigger: AGAAGAGGTTCGAAGTATCAAGAGTGAAACTGATAG...CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATCTACAACAAAACGCATaGAAATTCCCACGTCGTATT +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHLQQNA*KFPRRI
Trigger: AATACGACGTGGGAATTTCAATGCGTTTTGTTGTAG...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTTCACACTCCTTACATaGCTTGTTAACAACTTTCTC +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHFTLLT*LVNNFL
Trigger: GAGAAAGTTGTTAACAAGCAATGTAAGGAGTGTGAA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATTCCGATGTTTTATCTTaGGCACATTTTTATCAGCAG +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHSDVLS*AHFYQQ
Trigger: CTGCTGATAAAAATGTGCCAAAGATAAAACATCGGA...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp CTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTTGCGTGGATTTTGACACTGGTTaGGATATTACCAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: LIRNPSAIWAPFLFNACVDFDTG*DITKSA
Trigger: TGCAGATTTGGTAATATCCAAACCAGTGTCAAAATC...CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp ATTGAAATTCCCACGTCGTATTGCCAGGAAACAAAGAAAACATGCCAGCCCCATAGACACTCTTCTGTATaGCAATACCTTCTTTTACCA +
Preference number: 5 (lower is better)
Translates to: IEIPTSYCQETKKTCQPHRHSSV*QYLLLP
Trigger: TGGTAAAAGAAGGTATTGCAATACAGAAGAGTGTCT...ATGGGGCTGGCATGTTTTCTTTGTTTCCTGGCAATACGACGTGGGAATTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
CDS-3UTR CAA 90 bp TCTTTGACTGACAACTGTGTCTTCTGTGTCATCAAGTATTTTTCTATCTGCTACGCTGATTACTACTGCTaGAGCTCACACTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: SLTDNCVFCVIKYFSICYADYYC*SSHWHQ
Trigger: TTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGC...GTAGCAGATAGAAAAATACTTGATGACACAGAAGACACAGTTGTCAGTCAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp CGATTACTGGGTTCCTTGAGATCAGGATCCTTATCACCATTCTTTCCACATTTTTCTACACATACAACTTaGCCTAGTAGCTCATCAATC +
Preference number: 5 (lower is better)
Translates to: RLLGSLRSGSLSPFFPHFSTHTT*PSSSSI
Trigger: GATTGATGAGCTACTAGGCAAAGTTGTATGTGTAGA...AAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp CGATTACTGGGTTCCTTGAGATCAGGATCCTTATCACCATTCTTTCCACATTTTAGAACTTTCAGAAGCTaGAAGTCCATTAAGGATCGA +
Preference number: 5 (lower is better)
Translates to: RLLGSLRSGSLSPFFPHFRTFRS*KSIKDR
Trigger: TCGATCCTTAATGGACTTCAAGCTTCTGAAAGTTCT...AAAATGTGGAAAGAATGGTGATAAGGATCCTGATCTCAAGGAACCCAGTAATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS-3UTR CAA 90 bp TTGGAAGTAAAATTAAGTCCCTGCTTAGGTTTACTGACATTCTTCAATCGTGGAGCCTTCTCTTCCTTTTaGCCAGGTGATCCAGTTTTT +
Preference number: 5 (lower is better)
Translates to: LEVKLSPCLGLLTFFNRGAFSSF*PGDPVF
Trigger: AAAAACTGGATCACCTGGCAAAAAGGAAGAGAAGGC...TCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp ACAGTCCAGAAAGTGCTTCTCAATGGCAGATTCTTCAACTTTATAAGGGAGATTTTTGGCCCTGCTGTTTaGAAGTCTTTCATCAGAGTT +
Preference number: 5 (lower is better)
Translates to: TVQKVLLNGRFFNFIREIFGPAV*KSFIRV
Trigger: AACTCTGATGAAAGACTTCAAAACAGCAGGGCCAAA...AATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp AAAAACGACTTCAGCTTCTTCTTATTACATGTAACAGGCAAATTCCCAACAAACGAACCTCTTCTTGGTTaGGAGCCAGTGGTTCTGATA +
Preference number: 5 (lower is better)
Translates to: KNDFSFFLLHVTGKFPTNEPLLG*EPVVLI
Trigger: TATCAGAACCACTGGCTCCAAACCAAGAAGAGGTTC...GTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp TCAACTCTAATACGAAATCCATCTGCAATCTGGGCCCCATTTCTTTTCAATGCTAGACACTCTTCTGTATaGCAATACCTTCTTTTACCA +
Preference number: 5 (lower is better)
Translates to: STLIRNPSAIWAPFLFNARHSSV*QYLLLP
Trigger: TGGTAAAAGAAGGTATTGCAATACAGAAGAGTGTCT...AGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS-3UTR CAA 90 bp TTGTCTCTAGATGAGGTCTCAGATGCGAGATCAACTCTAATACGAAATCCATCTTGTTGTTTACCACTGTaGCTTTATGGCTTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: LSLDEVSDARSTLIRNPSCCLPL*LYGFFS
Trigger: AGAAAAGAAGCCATAAAGCAACAGTGGTAAACAACA...AGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS TCA 90 bp CTTTCTGGAGATTTTGACACTGGTTTGGATATTACCAAATCTGCATaGACTTTGTTTTCTTCTAGCAAAGATGAACTGTTCTGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSGDFDTGLDITKSA*TLFSSSKDELFCSS
Trigger: GGAGGAACAGAACAGTTCATCTTTGCTAGAAGAAAACAAAGTTCATGCAGATTTGGTAATATCCAAACCAGTGTCAAAATCTCCAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
CDS TCA 90 bp TCTTTCAATTCAGTCTTCCAGTTAGCAGGAATAGTTCTACTTTTGTaGAATTCAAGTGCCTGTTCAAAGGCTTGCTTTAAAACAGCATCA +
Preference number: 5 (lower is better)
Translates to: SFNSVFQLAGIVLLL*NSSACSKACFKTAS
Trigger: TGATGCTGTTTTAAAGCAAGCCTTTGAACAGGCACTTGAATTTCACAAAAGTAGAACTATTCCTGCTAACTGGAAGACTGAATTGAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000471257.5
ENST00000491632.5
CDS-3UTR CAA 90 bp AAAAACGACTTCAGCTTCTTCTTATTACATGTAACAGGCAAATTCCCAACAAACCACTATCACTACTATTaGTGCCTTTTCCCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: KNDFSFFLLHVTGKFPTNHYHYY*CLFPSF
Trigger: AAAAGAAGGGAAAAGGCACAAATAGTAGTGATAGTG...GTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS CCA 72 bp GGCAGTCGGCCGCCGGGCGGCGGCGAAGGGAGGCGCTaGGTGAGGGAGCAGGTTTGTCGCCGTCGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: GSRPPGGGEGRR*VREQVCRRRLV
Trigger: CACCAACCGACGGCGACAAACCTGCTCCCTCACCCAGCGCCTCCCTTCGCCGCCGCCCGGCGGCCGACTGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS GCA 72 bp GCGCTGCCCTCCAGAGGACGGCGGCGATGGACCCTCTaGAGCTCCCTCCGGGCAAAGGTCCAGGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: ALPSRGRRRWTL*SSLRAKVQAVA
Trigger: GGCCACCGCCTGGACCTTTGCCCGGAGGGAGCTGCAGAGGGTCCATCGCCGCCGTCCTCTGGAGGGCAGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS CCA 72 bp CCCCCAATCGCGCTGCCCTCCAGAGGACGGCGGCGATaGACCCTCTGCAGCTCCCTCCGGGCAAAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: PPIALPSRGRRR*TLCSSLRAKVQ
Trigger: CTGGACCTTTGCCCGGAGGGAGCTGCAGAGGGTCCATCGCCGCCGTCCTCTGGAGGGCAGCGCGATTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS CAA 90 bp GCCGCCGGGCGGCGGCGAAGGGAGGCGCTGGGTGAGGGAGCAGGTTaGTCGCCGTCGGTTGGTGGTCCTCGCCGTTTCAGAAAAGCCTCA +
Preference number: 6 (lower is better)
Translates to: AAGRRRREALGEGAG*SPSVGGPRRFRKAS
Trigger: TGAGGCTTTTCTGAAACGGCGAGGACCACCAACCGACGGCGACAAACCTGCTCCCTCACCCAGCGCCTCCCTTCGCCGCCGCCCGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS CCA 72 bp GCAGCTCCCTCCGGGCAAAGGTCCAGGCGGTGGCCGTaGCGGCGGCAAGATGAAGCTCAAGAGTCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: AAPSGQRSRRWP*RRQDEAQESPS
Trigger: GGAGGGAGACTCTTGAGCTTCATCTTGCCGCCGCCACGGCCACCGCCTGGACCTTTGCCCGGAGGGAGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS CAA 72 bp CGGCGGCGAAGGGAGGCGCTGGGTGAGGGAGCAGGTTaGTCGCCGTCGGTTGGTGGTCCTCGCCGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: RRRREALGEGAG*SPSVGGPRRFR
Trigger: TCTGAAACGGCGAGGACCACCAACCGACGGCGACAAACCTGCTCCCTCACCCAGCGCCTCCCTTCGCCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS CCA 72 bp CCCTCTGCAGCTCCCTCCGGGCAAAGGTCCAGGCGGTaGCCGTGGCGGCGGCAAGATGAAGCTCAAGAGTCT +
Preference number: 6 (lower is better)
Translates to: PSAAPSGQRSRR*PWRRQDEAQES
Trigger: AGACTCTTGAGCTTCATCTTGCCGCCGCCACGGCCACCGCCTGGACCTTTGCCCGGAGGGAGCTGCAGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS CCA 72 bp AGCAAAGGTCAGGCAGTGGAGGTGGCAGGAGTCTCCTaGAAGAGCAGCAGGAGGTCAGTGTGGGGCACTGCC +
Preference number: 6 (lower is better)
Translates to: SKGQAVEVAGVS*KSSRRSVWGTA
Trigger: GGCAGTGCCCCACACTGACCTCCTGCTGCTCTTCCAGGAGACTCCTGCCACCTCCACTGCCTGACCTTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421364.5
CDS TCA 72 bp ACCAGGTTCAGCTGCACCTTCCTCGGAGGCGAGATCTaGCCCTGGCACGTCCAGAGTCCCCTCTCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: TRFSCTFLGGEI*PWHVQSPLSPS
Trigger: AGAAGGAGAGAGGGGACTCTGGACGTGCCAGGGTCAGATCTCGCCTCCGAGGAAGGTGCAGCTGAACCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000421364.5
ENST00000462969.1
ENST00000466653.1
ENST00000491632.5
CDS TCA 72 bp TCCTCCCAACACAGCCTCCTCAGTAGCTGGGGCTACTaGGTGCACTGGGGCTGGAGTGCACTGACATGCCCT +
Preference number: 6 (lower is better)
Translates to: SSQHSLLSSWGY*VHWGWSALTCP
Trigger: AGGGCATGTCAGTGCACTCCAGCCCCAGTGCACTCAGTAGCCCCAGCTACTGAGGAGGCTGTGTTGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466653.1
CDS CAA 90 bp GGCGAAGGGAGGCGCTGGGTGAGGGAGCAGGTTTGTCGCCGTCGGTaGGTGGTCCTCGCCGTTTCAGAAAAGCCTCATTTTGGGAGTGAA +
Preference number: 6 (lower is better)
Translates to: GEGRRWVREQVCRRR*VVLAVSEKPHFGSE
Trigger: TTCACTCCCAAAATGAGGCTTTTCTGAAACGGCGAGGACCACCAACCGACGGCGACAAACCTGCTCCCTCACCCAGCGCCTCCCTTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS CAA 72 bp TTCAGCTGCACACAGCTCGGCAGCTTCCCGTCCCCATaGTCGAGACCCGACGGAGTTTCCCGTCTACGACAA +
Preference number: 6 (lower is better)
Translates to: FSCTQLGSFPSP*SRPDGVSRLRQ
Trigger: TTGTCGTAGACGGGAAACTCCGTCGGGTCTCGACAATGGGGACGGGAAGCTGCCGAGCTGTGTGCAGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366603.6
CDS CAA 72 bp AGGCGCTGGGTGAGGGAGCAGGTTTGTCGCCGTCGGTaGGTGGTCCTCGCCGTTTCAGAAAAGCCTCATTTT +
Preference number: 6 (lower is better)
Translates to: RRWVREQVCRRR*VVLAVSEKPHF
Trigger: AAAATGAGGCTTTTCTGAAACGGCGAGGACCACCAACCGACGGCGACAAACCTGCTCCCTCACCCAGCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS TCA 72 bp GTGATCTTGGCTCACTGCAGCCTTTCCGGGATCAAGTaGTTCTCCCTCATCAGCCCCCAAGGTAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: VILAHCSLSGIK*FSLISPQGSWD
Trigger: GTCCCAGCTACCTTGGGGGCTGATGAGGGAGAATCACTTGATCCCGGAAAGGCTGCAGTGAGCCAAGATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471257.5
CDS GCA 72 bp ATCTTGGCTCACTGCAAGCTCCGTCTCTCGGTTTCATaGCATTCTCCTGCCTCAGCCTACCGAGTAGCTGGG +
Preference number: 6 (lower is better)
Translates to: ILAHCKLRLSVS*HSPASAYRVAG
Trigger: CCCAGCTACTCGGTAGGCTGAGGCAGGAGAATGGCATGAAACCGAGAGACGGAGCTTGCAGTGAGCCAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466653.1
CDS CCA 72 bp GCATCAAAACCTGCTGGCGAGCTATTCCCTTCAGACTaGAGGTCTTGGAGCTCCCCAGCAACACTATCCACC +
Preference number: 6 (lower is better)
Translates to: ASKPAGELFPSD*RSWSSPATLST
Trigger: GGTGGATAGTGTTGCTGGGGAGCTCCAAGACCTCCAGTCTGAAGGGAATAGCTCGCCAGCAGGTTTTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS CAA 90 bp GTCGCCGTCGGTTGGTGGTCCTCGCCGTTTCAGAAAAGCCTCATTTaGGGAGTGAAGGACGTCTTCTGGGAGTGGTTGAAGCATTCCATT +
Preference number: 6 (lower is better)
Translates to: VAVGWWSSPFQKSLI*GVKDVFWEWLKHSI
Trigger: AATGGAATGCTTCAACCACTCCCAGAAGACGTCCTTCACTCCCAAAATGAGGCTTTTCTGAAACGGCGAGGACCACCAACCGACGGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS CAA 72 bp GGTTGGTGGTCCTCGCCGTTTCAGAAAAGCCTCATTTaGGGAGTGAAGGACGTCTTCTGGGAGTGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: GWWSSPFQKSLI*GVKDVFWEWLK
Trigger: CTTCAACCACTCCCAGAAGACGTCCTTCACTCCCAAAATGAGGCTTTTCTGAAACGGCGAGGACCACCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474953.5
CDS CAA 90 bp GGCATCAAAACCTGCTGGCGAGCTATTCCCTTCAGACTGGAGGTCTaGGAGCTCCCCAGCAACACTATCCACCTCAATTGTGCTATCAGT +
Preference number: 6 (lower is better)
Translates to: GIKTCWRAIPFRLEV*ELPSNTIHLNCAIS
Trigger: ACTGATAGCACAATTGAGGTGGATAGTGTTGCTGGGGAGCTCCAAGACCTCCAGTCTGAAGGGAATAGCTCGCCAGCAGGTTTTGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS CCA 72 bp CCCTCGTCCATACCGCACTTGGACTTTCATGCCTGGTaGATAGCACTCAAACTCCTCTTCCTCATTGTTGTC +
Preference number: 6 (lower is better)
Translates to: PSSIPHLDFHAW*IALKLLFLIVV
Trigger: GACAACAATGAGGAAGAGGAGTTTGAGTGCTATCCACCAGGCATGAAAGTCCAAGTGCGGTATGGACGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000366603.6
ENST00000421364.5
ENST00000471257.5
CDS CCA 72 bp CTGGTTCTGGCTGATTACTACTGCTTGAGCTCACACTaGCATCAAAACCTGCTGGCGAGCTATTCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: LVLADYYCLSSH*HQNLLASYSLQ
Trigger: CTGAAGGGAATAGCTCGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAGAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS TCA 72 bp TTCAGGATGTTCTGGTTCTGGCTGATTACTACTGCTTaGGCTCACACTGGCATCAAAACCTGCTGGCGAGCT +
Preference number: 6 (lower is better)
Translates to: FRMFWFWLITTA*AHTGIKTCWRA
Trigger: AGCTCGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACATCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS CAA 72 bp TTTCAGGATGTTCTGGTTCTGGCTGATTACTACTGCTaGAGCTCACACTGGCATCAAAACCTGCTGGCGAGC +
Preference number: 6 (lower is better)
Translates to: FQDVLVLADYYC*SSHWHQNLLAS
Trigger: GCTCGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACATCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS TCA 72 bp TTGTCGAGACCCGACGGAGTTTCCCGTCTACGACAATaGCGCCATTTCTGTCAGAGAAGAAACTCACAACAA +
Preference number: 6 (lower is better)
Translates to: LSRPDGVSRLRQ*RHFCQRRNSQQ
Trigger: TTGTTGTGAGTTTCTTCTCTGACAGAAATGGCGTCATTGTCGTAGACGGGAAACTCCGTCGGGTCTCGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366603.6
CDS GCA 72 bp GATTTTTCCCTCGTCCATACCGCACTTGGACTTTCATaGCTGGTGGATAGCACTCAAACTCCTCTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: DFSLVHTALGLS*LVDSTQTPLPH
Trigger: ATGAGGAAGAGGAGTTTGAGTGCTATCCACCAGGCATGAAAGTCCAAGTGCGGTATGGACGAGGGAAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000366603.6
ENST00000421364.5
ENST00000471257.5
CDS GCA 72 bp CTTTTTCAGGATGTTCTGGTTCTGGCTGATTACTACTaGTTGAGCTCACACTGGCATCAAAACCTGCTGGCG +
Preference number: 6 (lower is better)
Translates to: LFQDVLVLADYY*LSSHWHQNLLA
Trigger: CGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACATCCTGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS CAA 90 bp TACAGGCTTTTTCAGGATGTTCTGGTTCTGGCTGATTACTACTGCTaGAGCTCACACTGGCATCAAAACCTGCTGGCGAGCTATTCCCTT +
Preference number: 6 (lower is better)
Translates to: YRLFQDVLVLADYYC*SSHWHQNLLASYSL
Trigger: AAGGGAATAGCTCGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACATCCTGAAAAAGCCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000474953.5
ENST00000491632.5
CDS CAA 90 bp TCTCACCTTTTTCAGGATGTTCTGGTTCTGGCTGATTACTACTGCTaGAGCTCACACTGGCATCAAAACCTGCTGGCGAGCTATTCCCTT +
Preference number: 6 (lower is better)
Translates to: SHLFQDVLVLADYYC*SSHWHQNLLASYSL
Trigger: AAGGGAATAGCTCGCCAGCAGGTTTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACATCCTGAAAAAGGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471257.5
CDS TCA 72 bp TTAGTCAGGCTTGAAAATCAGTTTGACACGGTTGTCTaGGGAAAGCAGTGCCTGGACAGTTGGTTGCTCCAA +
Preference number: 6 (lower is better)
Translates to: LVRLENQFDTVV*GKQCLDSWLLQ
Trigger: TTGGAGCAACCAACTGTCCAGGCACTGCTTTCCTCAGACAACCGTGTCAAACTGATTTTCAAGCCTGACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471257.5
ENST00000494543.1
CDS TCA 72 bp GTGGAGGGGTCTTTTTCAGGATGTTCTGGTTCTGGCTaGTTACTACTGCTTGAGCTCACACTGGCATCAAAA +
Preference number: 6 (lower is better)
Translates to: VEGSFSGCSGSG*LLLLELTLASK
Trigger: TTTTGATGCCAGTGTGAGCTCAAGCAGTAGTAATCAGCCAGAACCAGAACATCCTGAAAAAGACCCCTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494543.1
CDS CAA 90 bp TCCCCAGCAACACTATCCACCTCAATTGTGCTATCAGTTTCACTCTaGATACTTCGAACCTCTTCTTGGTTTGGAGCCAGTGGTTCTGAT +
Preference number: 6 (lower is better)
Translates to: SPATLSTSIVLSVSL*ILRTSSWFGASGSD
Trigger: ATCAGAACCACTGGCTCCAAACCAAGAAGAGGTTCGAAGTATCAAGAGTGAAACTGATAGCACAATTGAGGTGGATAGTGTTGCTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS TCA 72 bp GCTCCTACCTTTAGTGGGCCCTTTATGTGGTCATCCTaGACTTCCACTGTTGAAGAATCATGTCTAAATGTC +
Preference number: 6 (lower is better)
Translates to: APTFSGPFMWSS*TSTVEESCLNV
Trigger: GACATTTAGACATGATTCTTCAACAGTGGAAGTTCAGGATGACCACATAAAGGGCCCACTAAAGGTAGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS TCA 72 bp TCCAGTTTGGATACCATTTCAGGAGATGGATTTGTCTaGAATGGTGGTTTGGACAAGCGCCGAAGTTTACAG +
Preference number: 6 (lower is better)
Translates to: SSLDTISGDGFV*NGGLDKRRSLQ
Trigger: CTGTAAACTTCGGCGCTTGTCCAAACCACCATTTCAGACAAATCCATCTCCTGAAATGGTATCCAAACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000491632.5
CDS CCA 72 bp GACAGTTGGTTGCTCCAAACCCCTACATACAGTATTTaGTTAAGGGTGGAGGGGTCTGTCAATAAATCAAAA +
Preference number: 6 (lower is better)
Translates to: DSWLLQTPTYSI*LRVEGSVNKSK
Trigger: TTTTGATTTATTGACAGACCCCTCCACCCTTAACCAAATACTGTATGTAGGGGTTTGGAGCAACCAACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471257.5
CDS CAA 72 bp ACACTATCCACCTCAATTGTGCTATCAGTTTCACTCTaGATACTTCGAACCTCTTCTTGGTTTGGAGCCAGT +
Preference number: 6 (lower is better)
Translates to: TLSTSIVLSVSL*ILRTSSWFGAS
Trigger: ACTGGCTCCAAACCAAGAAGAGGTTCGAAGTATCAAGAGTGAAACTGATAGCACAATTGAGGTGGATAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
ENST00000494543.1
CDS CAA 90 bp ATGCCATATAGTCAACCACTGCATATAATGAATTCTCAAACAGGTTaGGATTTGGGCCTGGGTGCAATTTCTAGCATGTGTTCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: MPYSQPLHIMNSQTG*DLGLGAISSMCSGP
Trigger: TGGACCAGAACACATGCTAGAAATTGCACCCAGGCCCAAATCCAAACCTGTTTGAGAATTCATTATATGCAGTGGTTGACTATATGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471257.5
CDS CCA 72 bp GTCCCTGAATACTTGACCAGACATCTTTTCGATCTTTaGCCCTGCTGTTTTGAAGTCTTTCATCAGAGTTAT +
Preference number: 6 (lower is better)
Translates to: VPEYLTRHLFDL*PCCFEVFHQSY
Trigger: ATAACTCTGATGAAAGACTTCAAAACAGCAGGGCCAAAGATCGAAAAGATGTCTGGTCAAGTATTCAGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
CDS CAA 72 bp ACCTTGACTTTGACAAGTCTTTTTGCTGTCTTGATCTaGGCTTCACAAAAGGCTCCTCTGTATTTAGCACTC +
Preference number: 6 (lower is better)
Translates to: TLTLTSLFAVLI*ASQKAPLYLAL
Trigger: GAGTGCTAAATACAGAGGAGCCTTTTGTGAAGCCAAGATCAAGACAGCAAAAAGACTTGTCAAAGTCAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS CAA 72 bp AGTCAACCACTGCATATAATGAATTCTCAAACAGGTTaGGATTTGGGCCTGGGTGCAATTTCTAGCATGTGT +
Preference number: 6 (lower is better)
Translates to: SQPLHIMNSQTG*DLGLGAISSMC
Trigger: ACACATGCTAGAAATTGCACCCAGGCCCAAATCCAAACCTGTTTGAGAATTCATTATATGCAGTGGTTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471257.5
CDS CAA 90 bp CTAAATGTCACCTTGACTTTGACAAGTCTTTTTGCTGTCTTGATCTaGGCTTCACAAAAGGCTCCTCTGTATTTAGCACTCACATCAGTG +
Preference number: 6 (lower is better)
Translates to: LNVTLTLTSLFAVLI*ASQKAPLYLALTSV
Trigger: CACTGATGTGAGTGCTAAATACAGAGGAGCCTTTTGTGAAGCCAAGATCAAGACAGCAAAAAGACTTGTCAAAGTCAAGGTGACATTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS CAA 90 bp GATGACAGAAGTATGGCTATGGCACCATCGAAAGGCACTAATACTTaGGGAAGGTACCGATTTGAATTTCCACTTTTAACAATTTCACGG +
Preference number: 6 (lower is better)
Translates to: DDRSMAMAPSKGTNT*GRYRFEFPLLTISR
Trigger: CCGTGAAATTGTTAAAAGTGGAAATTCAAATCGGTACCTTCCCAAAGTATTAGTGCCTTTCGATGGTGCCATAGCCATACTTCTGTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471257.5
CDS CAA 90 bp TCATGTCTAAATGTCACCTTGACTTTGACAAGTCTTTTTGCTGTCTaGATCTTGGCTTCACAAAAGGCTCCTCTGTATTTAGCACTCACA +
Preference number: 6 (lower is better)
Translates to: SCLNVTLTLTSLFAV*ILASQKAPLYLALT
Trigger: TGTGAGTGCTAAATACAGAGGAGCCTTTTGTGAAGCCAAGATCAAGACAGCAAAAAGACTTGTCAAAGTCAAGGTGACATTTAGACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS TCA 72 bp CATTGCTTGTTAACAACTTTCTCTGGCAATGCCATCTaGAATTCAATGTTGGCTGATCTACAGTACTCCTCA +
Preference number: 6 (lower is better)
Translates to: HCLLTTFSGNAI*NSMLADLQYSS
Trigger: TGAGGAGTACTGTAGATCAGCCAACATTGAATTTCAGATGGCATTGCCAGAGAAAGTTGTTAACAAGCAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000418304.1
ENST00000421364.5
ENST00000471257.5
ENST00000491632.5
CDS GCA 72 bp ATGTCTAAATGTCACCTTGACTTTGACAAGTCTTTTTaGTGTCTTGATCTTGGCTTCACAAAAGGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: MSKCHLDFDKSF*CLDLGFTKGSS
Trigger: AGAGGAGCCTTTTGTGAAGCCAAGATCAAGACAGCAAAAAGACTTGTCAAAGTCAAGGTGACATTTAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS CCA 72 bp TGGTTTATAAGAAAAATGATGACAGAAGTATGGCTATaGCACCATCGAAAGGCACTAATACTTTGGGAAGGT +
Preference number: 6 (lower is better)
Translates to: WFIRKMMTEVWL*HHRKALILWEG
Trigger: ACCTTCCCAAAGTATTAGTGCCTTTCGATGGTGCCATAGCCATACTTCTGTCATCATTTTTCTTATAAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471257.5
CDS TCA 72 bp CAACTCGCATCTGTTAGTTTATTGATAACAGCTTCCTaGTATGCACCATCAAGATTCTTCACTTCCACAATA +
Preference number: 6 (lower is better)
Translates to: QLASVSLLITAS*YAPSRFFTSTI
Trigger: TATTGTGGAAGTGAAGAATCTTGATGGTGCATATCAGGAAGCTGTTATCAATAAACTAACAGATGCGAGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000418304.1
ENST00000421364.5
ENST00000466653.1
ENST00000491632.5
CDS TCA 72 bp CCATTAAGGATCGAAGTAATTTCTATGGACTTAATATaGGCAGTATCAGAGTTTTTGGCATCAGTGAGATCC +
Preference number: 6 (lower is better)
Translates to: PLRIEVISMDLI*AVSEFLASVRS
Trigger: GGATCTCACTGATGCCAAAAACTCTGATACTGCTCATATTAAGTCCATAGAAATTACTTCGATCCTTAATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000491632.5
CDS TCA 72 bp TTTGACTGGCTGACTCTTAGTTATACTTTCACCAGCTaGAAGTTCTTCACTATCACTACTATTTGTGCCTTT +
Preference number: 6 (lower is better)
Translates to: FDWLTLSYTFTS*KFFTITTICAF
Trigger: AAAGGCACAAATAGTAGTGATAGTGAAGAACTTTCAGCTGGTGAAAGTATAACTAAGAGTCAGCCAGTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000474953.5
CDS CCA 72 bp ATGAAGTGGTTTATAAGAAAAATGATGACAGAAGTATaGCTATGGCACCATCGAAAGGCACTAATACTTTGG +
Preference number: 6 (lower is better)
Translates to: MKWFIRKMMTEV*LWHHRKALILW
Trigger: CCAAAGTATTAGTGCCTTTCGATGGTGCCATAGCCATACTTCTGTCATCATTTTTCTTATAAACCACTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471257.5
CDS GCA 72 bp CTTTTGTTTCTTCTTCATCTTCATCTGAAGAGCTGTTaGTACTGTTTTCCATGCAAAGTGATTCTTTGTTCT +
Preference number: 6 (lower is better)
Translates to: LLFLLHLHLKSC*YCFPCKVILCS
Trigger: AGAACAAAGAATCACTTTGCATGGAAAACAGTAGCAACAGCTCTTCAGATGAAGATGAAGAAGAAACAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
CDS GCA 72 bp GAATACTTGACCAGACATCTTTTCGATCTTTGGCCCTaGTGTTTTGAAGTCTTTCATCAGAGTTATTTAAAA +
Preference number: 6 (lower is better)
Translates to: EYLTRHLFDLWP*CFEVFHQSYLK
Trigger: TTTTAAATAACTCTGATGAAAGACTTCAAAACAGCAGGGCCAAAGATCGAAAAGATGTCTGGTCAAGTATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264183.9
ENST00000349213.7
ENST00000366603.6
ENST00000421364.5
ENST00000444620.2
ENST00000471257.5
ENST00000474953.5
ENST00000491632.5
CDS GCA 72 bp ATTAGCCATTTGAATTTAGTCCTACAGAAAACAACCTaGCTAGAAACCTGGAAAATCATATACAAATGCAGC +
Preference number: 6 (lower is better)
Translates to: ISHLNLVLQKTT*LETWKIIYKCS
Trigger: GCTGCATTTGTATATGATTTTCCAGGTTTCTAGGCAGGTTGTTTTCTGTAGGACTAAATTCAAATGGCTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474401.1
CDS CCA 72 bp ATAAAGGATTCTTTCATTTTGAAGATTAGTCATGCCTaGATAGTTCAGTTGCATGAGATAGTATGGCACAGA +
Preference number: 6 (lower is better)
Translates to: IKDSFILKISHA*IVQLHEIVWHR
Trigger: TCTGTGCCATACTATCTCATGCAACTGAACTATCCAGGCATGACTAATCTTCAAAATGAAAGAATCCTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471257.5