RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARID4A (Homo sapiens)

Ensembl gene IDs: ENSG00000032219

Ensembl transcript IDs: ENST00000348476.7, ENST00000355431.8, ENST00000395168.7, ENST00000417477.2, ENST00000424658.5, ENST00000431317.6, ENST00000431612.5, ENST00000445108.5, ENST00000553355.1

Found 457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCTGGTCTGGAGGGACCCTTTAGGAATCACTGCTCTAGTTCACTaGTTCATTCAACAAATTTTGAGGGTCCACTATGTATCAGGCACT +
Preference number: 1 (lower is better)
Translates to: LLVWRDPLGITALVH*FIQQILRVHYVSGT
Trigger: AGTGCCTGATACATAGTGGACCCTCAAAATTTGTTGAATGAATCAGTGAACTAGAGCAGTGATTCCTAAAGGGTCCCTCCAGACCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431612.5
3UTR GCA 90 bp AGTAAGGCTGATGCTGCTGGTCTGGAGGGACCCTTTAGGAATCACTaGTCTAGTTCACTGATTCATTCAACAAATTTTGAGGGTCCACTA +
Preference number: 1 (lower is better)
Translates to: SKADAAGLEGPFRNH*SSSLIHSTNFEGPL
Trigger: TAGTGGACCCTCAAAATTTGTTGAATGAATCAGTGAACTAGAGCAGTGATTCCTAAAGGGTCCCTCCAGACCAGCAGCATCAGCCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431612.5
3UTR CCA 90 bp CAACTCTTAAAGGACCCTTTACTTGGTCATCTTGTACCAATTGTGTaGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGATGAAG +
Preference number: 1 (lower is better)
Translates to: QLLKDPLLGHLVPIV*YYPVSGVPPEFLMK
Trigger: CTTCATCAGAAACTCTGGGGGTACTCCTGAAACAGGATAATACCACACAATTGGTACAAGATGACCAAGTAAAGGGTCCTTTAAGAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431612.5
3UTR TCA 90 bp CAATTTATTTTGTCCCATTTACACCTTCAATCCTGGGCACACTGCTaGACATATACTTTGGCAGTTCTAAATAGCAAGTGCTTCCACAAA +
Preference number: 1 (lower is better)
Translates to: QFILSHLHLQSWAHC*TYTLAVLNSKCFHK
Trigger: TTTGTGGAAGCACTTGCTATTTAGAACTGCCAAAGTATATGTTCAGCAGTGTGCCCAGGATTGAAGGTGTAAATGGGACAAAATAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR GCA 90 bp GAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTTaGATCTCAACTTTGGGAGATATAAATTCATTCGGCAGTATAGCA +
Preference number: 1 (lower is better)
Translates to: EQFTDKAYIVALLSC*ISTLGDINSFGSIA
Trigger: TGCTATACTGCCGAATGAATTTATATCTCCCAAAGTTGAGATGCAACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR-3UTR CCA 90 bp GTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGATGAAGTAGATCTGGGGCTGATGCTGCTGGTCTaGAGGGACCCTTTAGGAATC +
Preference number: 2 (lower is better)
Translates to: VLSCFRSTPRVSDEVDLGLMLLV*RDPLGI
Trigger: GATTCCTAAAGGGTCCCTCCAGACCAGCAGCATCAG...CCCCAGATCTACTTCATCAGAAACTCTGGGGGTACTCCTGAAACAGGATAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431612.5
3UTR-3UTR CCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTGGGGATTTATGTCCATaGCAGCAAACTGCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCGDLCP*QQTAGK
Trigger: CTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCC...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR-3UTR CCA 90 bp GTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGATGAAGTAGATCTGGGGGGGAAAATTTGCATTTaGAACAAGTTCCCAAGTAAG +
Preference number: 2 (lower is better)
Translates to: VLSCFRSTPRVSDEVDLGGKICI*NKFPSK
Trigger: CTTACTTGGGAACTTGTTCCAAATGCAAATTTTCCC...CCCCAGATCTACTTCATCAGAAACTCTGGGGGTACTCCTGAAACAGGATAATAC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000431612.5
3UTR-3UTR CCA 90 bp TCTTGTACCAATTGTGTGGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGAAGTAGATCTGGGGTaGGGAAAATTTGCATTTGGA +
Preference number: 2 (lower is better)
Translates to: SCTNCVVLSCFRSTPRVSEVDLG*GKFAFG
Trigger: TCCAAATGCAAATTTTCCCCACCCCAGATCTACTTC...AGAAACTCTGGGGGTACTCCTGAAACAGGATAATACCACACAATTGGTACAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431612.5
3UTR CAA 90 bp CAGCCTGGAAAAGTATACAGGATATACTTAGCAATGTCAAACCAGTaGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGT +
Preference number: 2 (lower is better)
Translates to: QPGKVYRIYLAMSNQ*SAFCGCNSGFGDLC
Trigger: ACATAAATCCCCAAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCTGTATACTTTTCCAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
3UTR-3UTR GCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTTCCATGGCAGCAAACTaGTGGGAAGGTAGAGAAAAT +
Preference number: 2 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCSMAAN*WEGREN
Trigger: ATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGA...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR-3UTR GCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTTTGATGTTTATCATGTaGACTTGCTTGTCTACGATT +
Preference number: 2 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSLMFIM*TCLSTI
Trigger: AATCGTAGACAAGCAAGTGCACATGATAAACATCAA...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR-3UTR CCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAATGGCAGCAAACTGCTaGGAAGGTAGAGAAAATGTT +
Preference number: 2 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSMAANC*EGRENV
Trigger: AACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCAT...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
3UTR-3UTR CCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTATGGCAGCAAACTGCTaGGAAGGTAGAGAAAATGTT +
Preference number: 2 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCMAANC*EGRENV
Trigger: AACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCAT...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR-3UTR CCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGATGGCAGCAAACTGCTaGGAAGGTAGAGAAAATGTT +
Preference number: 2 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLMAANC*EGRENV
Trigger: AACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCAT...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR CAA 90 bp CATCTTAGTGAAAGTGCAGCAGTAACTATTCAGCTGGGTAATATTTaGATGTTTATCATGTGCACTTGCTTGTCTACGATTTCTGTAACA +
Preference number: 2 (lower is better)
Translates to: HLSESAAVTIQLGNI*MFIMCTCLSTISVT
Trigger: TGTTACAGAAATCGTAGACAAGCAAGTGCACATGATAAACATCAAAATATTACCCAGCTGAATAGTTACTGCTGCACTTTCACTAAGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR-3UTR CCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCAGATACAATCCAGCCTaGAAAAGTATACAGGATATA +
Preference number: 2 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISRYNPA*KSIQDI
Trigger: TATATCCTGTATACTTTTCCAGGCTGGATTGTATCT...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
3UTR CCA 72 bp GGAACAAGTTCCCAAGTAAGGCTGATGCTGCTGGTCTaGAGGGACCCTTTAGGAATCACTGCTCTAGTTCAC +
Preference number: 3 (lower is better)
Translates to: GTSSQVRLMLLV*RDPLGITALVH
Trigger: GTGAACTAGAGCAGTGATTCCTAAAGGGTCCCTCCAGACCAGCAGCATCAGCCTTACTTGGGAACTTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431612.5
3UTR-3UTR CAA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTGCAATGTCAAACCAGTaGAGTGCTTTCTGTGGTTGT +
Preference number: 3 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSAMSNQ*SAFCGC
Trigger: ACAACCACAGAAAGCACTCAACTGGTTTGACATTGC...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR TCA 72 bp AGATGCCCATTTATAGTTCTATACTGTTTGATGGACTaGGACAGACTCCCTTTAACACAGGCAAGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: RCPFIVLYCLMD*DRLPLTQARLQ
Trigger: CTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR TCA 72 bp TTGTCCCATTTACACCTTCAATCCTGGGCACACTGCTaGACATATACTTTGGCAGTTCTAAATAGCAAGTGC +
Preference number: 3 (lower is better)
Translates to: LSHLHLQSWAHC*TYTLAVLNSKC
Trigger: GCACTTGCTATTTAGAACTGCCAAAGTATATGTTCAGCAGTGTGCCCAGGATTGAAGGTGTAAATGGGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR CCA 72 bp TGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATaGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTT +
Preference number: 3 (lower is better)
Translates to: CGCNSGFGDLCP*QQTAGKVEKMF
Trigger: AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
3UTR-3UTR CAA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTGTTTATCATGTGCACTaGCTTGTCTACGATTTCTGT +
Preference number: 3 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSVYHVH*LVYDFC
Trigger: ACAGAAATCGTAGACAAGCAAGTGCACATGATAAAC...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR-3UTR CAA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGGCAATGTCAAACCAGTaGAGTGCTTTCTGTGGTTGT +
Preference number: 3 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLAMSNQ*SAFCGC
Trigger: ACAACCACAGAAAGCACTCAACTGGTTTGACATTGC...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR-3UTR CAA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACGCAATGTCAAACCAGTaGAGTGCTTTCTGTGGTTGT +
Preference number: 3 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDAMSNQ*SAFCGC
Trigger: ACAACCACAGAAAGCACTCAACTGGTTTGACATTGC...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR-3UTR CAA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACGTTTATCATGTGCACTaGCTTGTCTACGATTTCTGT +
Preference number: 3 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNVYHVH*LVYDFC
Trigger: ACAGAAATCGTAGACAAGCAAGTGCACATGATAAAC...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
3UTR TCA 72 bp CAACTAGCATCTGTCAACTTGCTGATAATAGCTTCCTaGAAAGATCCATCAGATGTCCTTGTTTCAACAATA +
Preference number: 3 (lower is better)
Translates to: QLASVNLLIIAS*KDPSDVLVSTI
Trigger: TATTGTTGAAACAAGGACATCTGATGGATCTTTTCAGGAAGCTATTATCAGCAAGTTGACAGATGCTAGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR TCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAAGTCCTCCTCCCCTCTaGCCTCCGTGGGCCCCCGTC +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKSPPPL*PPWAPV
Trigger: GACGGGGGCCCACGGAGGTCAGAGGGGAGGAGGACT...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
CDS-3UTR GCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAACGCGGCTGCAGTTCCTaGGCCGGGTTCCCCACTCGC +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRERGCSS*AGFPTR
Trigger: GCGAGTGGGGAACCCGGCGCAGGAACTGCAGCCGCG...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
CDS-3UTR TCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTAGTCCTCCTCCCCTCTaGCCTCCGTGGGCCCCCGTC +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSSPPPL*PPWAPV
Trigger: GACGGGGGCCCACGGAGGTCAGAGGGGAGGAGGACT...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000348476.7
ENST00000355431.8
CDS-3UTR TCA 90 bp GTGGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGATGAAGTAGATCTGAGTCCTCCTCCCCTCTaGCCTCCGTGGGCCCCCGTC +
Preference number: 4 (lower is better)
Translates to: VVLSCFRSTPRVSDEVDLSPPPL*PPWAPV
Trigger: GACGGGGGCCCACGGAGGTCAGAGGGGAGGAGGACT...CAGATCTACTTCATCAGAAACTCTGGGGGTACTCCTGAAACAGGATAATACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR TCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGAGGTCGTCCCCGTTTTaGCTTCTGCCTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLRSSPF*LLPLLI
Trigger: GATGAGGAGAGGCAGAAGTCAAAACGGGGACGACCT...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTCGCGGCTGCAGTTCCTaGGCCGGGTTCCCCACTCGC +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSRGCSS*AGFPTR
Trigger: GCGAGTGGGGAACCCGGCGCAGGAACTGCAGCCGCG...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348476.7
ENST00000355431.8
CDS-3UTR GCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAACTCCCAGCCGCGGCTaGAGTTCCTGCGCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVTPSRG*SSCAGF
Trigger: GAACCCGGCGCAGGAACTGCAGCCGCGGCTGGGAGT...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
CDS-3UTR GCA 90 bp CATCTTGTACCAATTGTGTGGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCGCGGCTGCAGTTCCTaGGCCGGGTTCCCCACTCGC +
Preference number: 4 (lower is better)
Translates to: HLVPIVWYYPVSGVPPEFRGCSS*AGFPTR
Trigger: GCGAGTGGGGAACCCGGCGCAGGAACTGCAGCCGCG...AAACTCTGGGGGTACTCCTGAAACAGGATAATACCACACAATTGGTACAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR CCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGTTTGTTGGTGATCTGTaGGGTTCCAGCTCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLFVGDL*GSSSAS
Trigger: GCTCGCTGAGCTGGAACCCCACAGATCACCAACAAA...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGATGAAGCAGATGACATaGAGGCTCCCGCATGAGACA +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLMKQMT*RLPHET
Trigger: TGTCTCATGCGGGAGCCTCCATGTCATCTGCTTCAT...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGGGGGATTTATGTCCATaGCAGCAAACTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLGDLCP*QQTAGK
Trigger: CTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCC...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGTCCTGGGCACACTGCTaGACATATACTTTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLSWAHC*TYTLAV
Trigger: AACTGCCAAAGTATATGTTCAGCAGTGTGCCCAGGA...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGCAACTGCGGGTGAAGTaGGCGCTGTCAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLQLRVK*ALSAPE
Trigger: CTCTGGAGCTGACAGCGCGCACTTCACCCGCAGTTG...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
CDS-3UTR TCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAACTCGGTACTTGGCACTaGCATCGGTTCCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRELGTWH*HRFPLS
Trigger: TGACAGTGGGAACCGATGTCAGTGCCAAGTACCGAG...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAGGTCGTCCCCGTTTTaGCTTCTGCCTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRERSSPF*LLPLLI
Trigger: GATGAGGAGAGGCAGAAGTCAAAACGGGGACGACCT...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp GTACCAATTGTGTGGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGATGCAACTGCGGGTGAAGTaGGCGCTGTCAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VPIVWYYPVSGVPPEFLMQLRVK*ALSAPE
Trigger: CTCTGGAGCTGACAGCGCGCACTTCACCCGCAGTTG...CATCAGAAACTCTGGGGGTACTCCTGAAACAGGATAATACCACACAATTGGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR CCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAACAGTCGCTAGAACTATaGGGAGGGGGAAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKQSLEL*GGGKTG
Trigger: GCCTGTCTTTCCCCCTCCCCATAGTTCTAGCGACTG...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431317.6
CDS-3UTR GCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGCGCGGCTGCAGTTCCTaGGCCGGGTTCCCCACTCGC +
Preference number: 4 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLRGCSS*AGFPTR
Trigger: GCGAGTGGGGAACCCGGCGCAGGAACTGCAGCCGCG...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348476.7
ENST00000355431.8
CDS-3UTR GCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGCTTTTCATTTTTGGCTaGAGCACTTGTTCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLLFIFG*STCSLW
Trigger: CCAAAGCGAACAAGTGCTGCAGCCAAAAATGAAAAG...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAATTTGTTGGTGATCTGTaGGGTTCCAGCTCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKFVGDL*GSSSAS
Trigger: GCTCGCTGAGCTGGAACCCCACAGATCACCAACAAA...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGATGGCAGCAAACTGCTaGGAAGGTAGAGAAAATGTT +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLMAANC*EGRENV
Trigger: AACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCAT...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp GTGGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGATGAAGTAGATCTGCTCGGTACTTGGCACTaGCATCGGTTCCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: VVLSCFRSTPRVSDEVDLLGTWH*HRFPLS
Trigger: TGACAGTGGGAACCGATGTCAGTGCCAAGTACCGAG...CAGATCTACTTCATCAGAAACTCTGGGGGTACTCCTGAAACAGGATAATACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR TCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGGATCGAACTAAACACTaGTCCTTTTTCACTGTGATG +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLDRTKH*SFFTVM
Trigger: CATCACAGTGAAAAAGGATCAGTGTTTAGTTCGATC...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGATTGTAGGAAGCAGCTaGATTCAAAATAGGAATGCC +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLIVGSS*IQNRNA
Trigger: GGCATTCCTATTTTGAATTCAGCTGCTTCCTACAAT...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGCTTCAGAGTCACATTTaGTTTCAGTTTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLLQSHI*FQFLPS
Trigger: AGAGGGAAGAAACTGAAAGCAAATGTGACTCTGAAG...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGAAGCAGATGACATaGAGGCTCCCGCATGAGACA +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKMKQMT*RLPHET
Trigger: TGTCTCATGCGGGAGCCTCCATGTCATCTGCTTCAT...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAGGGGATTTATGTCCATaGCAGCAAACTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKGDLCP*QQTAGK
Trigger: CTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCC...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTCTCGGTACTTGGCACTaGCATCGGTTCCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFLGTWH*HRFPLS
Trigger: TGACAGTGGGAACCGATGTCAGTGCCAAGTACCGAG...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGTTCACTTTCACTGTTTaGATCGATATTTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLFTFTV*IDIFLR
Trigger: CCTGAGGAAAATATCGATTCAAACAGTGAAAGTGAA...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTATGGAGGCTCCCGCATaGGACACTTCCCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFMEAPA*DTSLSF
Trigger: GAAAGACAGGGAAGTGTCTCATGCGGGAGCCTCCAT...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGAAAGATCTTTTGTCTTaGTTCGTCTTCCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLKDLLS*FVFPFL
Trigger: AAGGAAAGGGAAGACGAAGCAAGACAAAAGATCTTT...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAGTGCGGGGATATTCTTaGAGGAGATCGTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGREVRGYS*RRSCKF
Trigger: AAACTTGCACGATCTCCTGCAAGAATATCCCCGCAC...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS-3UTR GCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGGCTTTACTTAGTTGTTaGATCTCAACTTTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLALLSC*ISTLGD
Trigger: ATCTCCCAAAGTTGAGATGCAACAACTAAGTAAAGC...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAATGCTTTCTGAAGCCCTaGTTTAGTGGAGAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRECFLKP*FSGELR
Trigger: TCTGAGCTCTCCACTAAACCAGGGCTTCAGAAAGCA...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAATGCTTTCTGAAGCCCTaGTTTAGTGGAGAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKCFLKP*FSGELR
Trigger: TCTGAGCTCTCCACTAAACCAGGGCTTCAGAAAGCA...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAATGAAGCAGATGACATaGAGGCTCCCGCATGAGACA +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVMKQMT*RLPHET
Trigger: TGTCTCATGCGGGAGCCTCCATGTCATCTGCTTCAT...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGGGATTTATGTCCATaGCAGCAAACTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLGDLCP*QQTAGK
Trigger: CTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCC...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp GTACCAATTGTGTGGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGATGCTGATGCTGCTGGTCTaGAGGGACCCTTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: VPIVWYYPVSGVPPEFLMLMLLV*RDPLGI
Trigger: GATTCCTAAAGGGTCCCTCCAGACCAGCAGCATCAG...CATCAGAAACTCTGGGGGTACTCCTGAAACAGGATAATACCACACAATTGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR TCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGAAGATGCTTGCTTTCTaGAGCCCTGGTTTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLKMLAF*SPGLVE
Trigger: CTCCACTAAACCAGGGCTTCAGAAAGCAAGCATCTT...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTCAACTGCGGGTGAAGTaGGCGCTGTCAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCQLRVK*ALSAPE
Trigger: CTCTGGAGCTGACAGCGCGCACTTCACCCGCAGTTG...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348476.7
ENST00000355431.8
CDS-3UTR GCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTTCAGTCCTCTCCGTTaGAGACACCACACTTACAAC +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLFSPLR*RHHTYN
Trigger: GTTGTAAGTGTGGTGTCTGCAACGGAGAGGACTGAA...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAACTCAGAGCTTTCAACTaGTACATCCTCAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKLRAFN*YILNAG
Trigger: ACCAGCATTGAGGATGTAGCAGTTGAAAGCTCTGAG...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAATCTCCATCTTTGATGTaGGGGGATATTCTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRESPSLM*GDILAG
Trigger: TCCTGCAAGAATATCCCCGCACATCAAAGATGGAGA...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS-3UTR GCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAATCCATGGCAGCAAACTaGTGGGAAGGTAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKSMAAN*WEGREN
Trigger: ATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGA...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTTTTGTTGGTGATCTGTaGGGTTCCAGCTCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFFVGDL*GSSSAS
Trigger: GCTCGCTGAGCTGGAACCCCACAGATCACCAACAAA...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCTTGTACCAATTGTGTGGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTTTTGTTGGTGATCTGTaGGGTTCCAGCTCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: SCTNCVVLSCFRSTPRVSFVGDL*GSSSAS
Trigger: GCTCGCTGAGCTGGAACCCCACAGATCACCAACAAA...AGAAACTCTGGGGGTACTCCTGAAACAGGATAATACCACACAATTGGTACAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR CCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTATGCTTTCTGAAGCCCTaGTTTAGTGGAGAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVCFLKP*FSGELR
Trigger: TCTGAGCTCTCCACTAAACCAGGGCTTCAGAAAGCA...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGAGATACAATCCAGCCTaGAAAAGTATACAGGATATA +
Preference number: 4 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLRYNPA*KSIQDI
Trigger: TATATCCTGTATACTTTTCCAGGCTGGATTGTATCT...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTCCTTTCAGACAAAGTaGGGTACGTCTCAATGTTCG +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLSFQTK*GTSQCS
Trigger: CGAACATTGAGACGTACCTCACTTTGTCTGAAAGGA...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAACTAGTAATTCATCATTaGGACGGCGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKLVIHH*DGACLH
Trigger: ATGAAGACAAGCGCCGTCTCAATGATGAATTACTAG...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGCTCTTCCTCTTCATCTaGGTCTTTGTCAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLLFLFI*VFVRIL
Trigger: GAGGATTCTGACAAAGACTCAGATGAAGAGGAAGAG...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAACCCACTCATCATACCTaGCATTCCATCCATAGTAAT +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKPTHHT*HSIHSN
Trigger: ATTACTATGGATGGAATGTCAGGTATGATGAGTGGG...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTAGGTCGTCCCCGTTTTaGCTTCTGCCTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFRSSPF*LLPLLI
Trigger: GATGAGGAGAGGCAGAAGTCAAAACGGGGACGACCT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAACTTCGAGACTCATCTTaGCTAAGAGTAAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKLRDSS*LRVSGE
Trigger: TTCACCACTTACTCTTAGTCAAGATGAGTCTCGAAG...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTATGGAGGCTCCCGCATaGGACACTTCCCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFMEAPA*DTSLSF
Trigger: GAAAGACAGGGAAGTGTCTCATGCGGGAGCCTCCAT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGCAACTGCGGGTGAAGTaGGCGCTGTCAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLQLRVK*ALSAPE
Trigger: CTCTGGAGCTGACAGCGCGCACTTCACCCGCAGTTG...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348476.7
ENST00000355431.8
CDS-3UTR GCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTCCCCGTTTTGACTTCTaGCTCTCCTCATCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSPRFDF*LSSSLF
Trigger: AAAGAGAGATGAGGAGAGGCAGAAGTCAAAACGGGG...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAAGTTTCAAATCCATTTaGCGATTCCCTCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKSFKSI*RFPLTE
Trigger: CTCTGTGAGAGGGAATCGGCAAATGGATTTGAAACT...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAACTTTTCATTTTTGGCTaGAGCACTTGTTCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRELFIFG*STCSLW
Trigger: CCAAAGCGAACAAGTGCTGCAGCCAAAAATGAAAAG...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTATCCATGGCAGCAAACTaGTGGGAAGGTAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVSMAAN*WEGREN
Trigger: ATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGA...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAAGGTGGTTTGTTGATTaGAGTACCTCTGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKRWFVD*STSVFH
Trigger: ATGGAAGACAGAGGTACTCCAATCAACAAACCACCT...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAATCCAAATCTACTTCATaGCAAACCAAGGTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKSKSTS*QTKVSG
Trigger: GCCTGAAACCTTGGTTTGCCATGAAGTAGATTTGGA...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAACTGAAAAGTTATGTTaGACTACAGGAGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKTEKLC*TTGGRA
Trigger: TGCCCTACCTCCTGTAGTCCAACATAACTTTTCAGT...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAAGCACTTGTTCGCTTTaGGGTACGCTTTTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKSTCSL*GTLLLF
Trigger: AAAAAGCAAAAGCGTACCCCAAAGCGAACAAGTGCT...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTCTTCATTTTTGTTGGTaGTCTGTGGGGTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFLHFCW*SVGFQL
Trigger: GAGCTGGAACCCCACAGATCACCAACAAAAATGAAG...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCACTCGGTACTTGGCACTaGCATCGGTTCCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSLGTWH*HRFPLS
Trigger: TGACAGTGGGAACCGATGTCAGTGCCAAGTACCGAG...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAACTGATAATAGCTTCCTaGAAAGATCCATCAGATGTC +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRELIIAS*KDPSDV
Trigger: GACATCTGATGGATCTTTTCAGGAAGCTATTATCAG...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGATCCTTTTTCACTGTaGTGTCATCATTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVDPFSL*CHHYSW
Trigger: CCAGCTGTAATGATGACATCACAGTGAAAAAGGATC...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAGATCGAACTAAACACTaGTCCTTTTTCACTGTGATG +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKDRTKH*SFFTVM
Trigger: CATCACAGTGAAAAAGGATCAGTGTTTAGTTCGATC...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAAAACAGGTGGTTTGTTaGTTGGAGTACCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVKQVVC*LEYLCL
Trigger: AAGACAGAGGTACTCCAATCAACAAACCACCTGTTT...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAATTGTAGGAAGCAGCTaGATTCAAAATAGGAATGCC +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGREIVGSS*IQNRNA
Trigger: GGCATTCCTATTTTGAATTCAGCTGCTTCCTACAAT...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGTGATGAACAGTTCTaGACTGAATATTTGCCGAAC +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLGDEQF*TEYLPN
Trigger: GTTCGGCAAATATTCAGTTCAGAACTGTTCATCACC...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTACCCACTCATCATACCTaGCATTCCATCCATAGTAAT +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVPTHHT*HSIHSN
Trigger: ATTACTATGGATGGAATGTCAGGTATGATGAGTGGG...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTAGGTCGTCCCCGTTTTaGCTTCTGCCTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCRSSPF*LLPLLI
Trigger: GATGAGGAGAGGCAGAAGTCAAAACGGGGACGACCT...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAATCACAGAGACCTTCTTaGGATTCTTCAGCAATACTA +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRESQRPS*DSSAIL
Trigger: TAGTATTGCTGAAGAATCTCAAGAAGGTCTCTGTGA...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAATGGAGGCTCCCGCATaGGACACTTCCCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSMEAPA*DTSLSF
Trigger: GAAAGACAGGGAAGTGTCTCATGCGGGAGCCTCCAT...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAATGTAAAAAGGACAGCTaGGAGCTATTGTCATCCAAA +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRECKKDS*ELLSSK
Trigger: TTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACA...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTACTGTTTGATGGACTaGGACAGACTCCCTTTAACA +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLYCLMD*DRLPLT
Trigger: TGTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTA...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTATACTGTTTGATGGACTaGGACAGACTCCCTTTAACA +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVYCLMD*DRLPLT
Trigger: TGTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTA...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTCAAATAACAAGCTGTTaGGCAGACTCGCTTCTACAC +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSQITSC*ADSLLH
Trigger: GTGTAGAAGCGAGTCTGCTCAACAGCTTGTTATTTG...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348476.7
CDS-3UTR GCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAACTTCAGAGTCACATTTaGTTTCAGTTTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRELQSHI*FQFLPS
Trigger: AGAGGGAAGAAACTGAAAGCAAATGTGACTCTGAAG...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTCTCAGAGCTTTCAACTaGTACATCCTCAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSLRAFN*YILNAG
Trigger: ACCAGCATTGAGGATGTAGCAGTTGAAAGCTCTGAG...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTTGCTTTCTGAAGCCCTaGTTTAGTGGAGAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFCFLKP*FSGELR
Trigger: TCTGAGCTCTCCACTAAACCAGGGCTTCAGAAAGCA...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAATAGCCCAAAACAGGTaGTTTGTTGATTGGAGTACC +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVIAQNR*FVDWST
Trigger: GGTACTCCAATCAACAAACCACCTGTTTTGGGCTAT...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAATCACTAGTCAGTTGTTaGATGCATTGGTTTGACTCT +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRESLVSC*MHWFDS
Trigger: AGAGTCAAACCAATGCATCCAACAACTGACTAGTGA...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTATCCAAATCTACTTCATaGCAAACCAAGGTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVSKSTS*QTKVSG
Trigger: GCCTGAAACCTTGGTTTGCCATGAAGTAGATTTGGA...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGAGCACTTGTTCGCTTTaGGGTACGCTTTTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLSTCSL*GTLLLF
Trigger: AAAAAGCAAAAGCGTACCCCAAAGCGAACAAGTGCT...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGCTGATAATAGCTTCCTaGAAAGATCCATCAGATGTC +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLLIIAS*KDPSDV
Trigger: GACATCTGATGGATCTTTTCAGGAAGCTATTATCAG...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTTCCTTTCAGACAAAGTaGGGTACGTCTCAATGTTCG +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFSFQTK*GTSQCS
Trigger: CGAACATTGAGACGTACCTCACTTTGTCTGAAAGGA...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGATCGAACTAAACACTaGTCCTTTTTCACTGTGATG +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVDRTKH*SFFTVM
Trigger: CATCACAGTGAAAAAGGATCAGTGTTTAGTTCGATC...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAGTTAAAGGCATTTCTTaGTCTAATTTGAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKVKGIS*SNLRAS
Trigger: AGAGGCTCTCAAATTAGATCAAGAAATGCCTTTAAC...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTCTCTTCCTCTTCATCTaGGTCTTTGTCAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFLFLFI*VFVRIL
Trigger: GAGGATTCTGACAAAGACTCAGATGAAGAGGAAGAG...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTCCCACTCATCATACCTaGCATTCCATCCATAGTAAT +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSPTHHT*HSIHSN
Trigger: ATTACTATGGATGGAATGTCAGGTATGATGAGTGGG...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAATCACTGGTCCTTTCTTaGGATACAGTATTTGTCATT +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKSLVLS*DTVFVI
Trigger: AATGACAAATACTGTATCTCAAGAAAGGACCAGTGA...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAACTGGAGTTCCAAAATaGTCTGGATTTGTTAATGGA +
Preference number: 4 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKTGVPK*SGFVNG
Trigger: TCCATTAACAAATCCAGAGCATTTTGGAACTCCAGT...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAACTGGAGTTCCAAAATaGTCTGGATTTGTTAATGGA +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRETGVPK*SGFVNG
Trigger: TCCATTAACAAATCCAGAGCATTTTGGAACTCCAGT...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGATCTTCACTATCACTaGTTTGTCCTGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVDLHYH*FVLFHS
Trigger: AGAATGGAACAGGACAAAGCAGTGATAGTGAAGATC...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355431.8
ENST00000395168.7
CDS-3UTR GCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTTCTTGCAGGAGATCGTaGAAGTTTCTGTGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFSCRRS*KFLWLR
Trigger: TCTAAGCCACAGAAACTTGCACGATCTCCTGCAAGA...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS-3UTR GCA 90 bp GTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGATGAAGTAGATCTGGGGCCCTTTAGGAATCACTaGTCTAGTTCACTGATTCAT +
Preference number: 4 (lower is better)
Translates to: VLSCFRSTPRVSDEVDLGPFRNH*SSSLIH
Trigger: ATGAATCAGTGAACTAGAGCAGTGATTCCTAAAGGG...CCCCAGATCTACTTCATCAGAAACTCTGGGGGTACTCCTGAAACAGGATAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR CCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTATTTGTTAATGGAAGCTaGTCAAGTGTCTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVFVNGS*SSVSLS
Trigger: AGAGAGTGAGACACTTGACCAGCTTCCATTAACAAA...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGCTTCATCATCACTACTaGATGACTCAAGGATTTCAC +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLLHHHY*MTQGFH
Trigger: GTGAAATCCTTGAGTCATCCAGTAGTGATGATGAAG...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGATCATTTTCTTCAGCTaGGCCATCTTCATCATCACT +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLIIFFS*AIFIIT
Trigger: AGTGATGATGAAGATGGCCCAGCTGAAGAAAATGAT...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTAGGTGGTTTGTTGATTaGAGTACCTCTGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSRWFVD*STSVFH
Trigger: ATGGAAGACAGAGGTACTCCAATCAACAAACCACCT...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTATAGCCCAAAACAGGTaGTTTGTTGATTGGAGTACC +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSIAQNR*FVDWST
Trigger: GGTACTCCAATCAACAAACCACCTGTTTTGGGCTAT...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTCACTAGTCAGTTGTTaGATGCATTGGTTTGACTCT +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLSLVSC*MHWFDS
Trigger: AGAGTCAAACCAATGCATCCAACAACTGACTAGTGA...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTACATTCTTTTCATTTTTaGCTGCAGCACTTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVHSFHF*LQHLFA
Trigger: AGCGAACAAGTGCTGCAGCCAAAAATGAAAAGAATG...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGCATTCTTTTCATTTTTaGCTGCAGCACTTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLHSFHF*LQHLFA
Trigger: AGCGAACAAGTGCTGCAGCCAAAAATGAAAAGAATG...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTATGAAGCAGATGACATaGAGGCTCCCGCATGAGACA +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFMKQMT*RLPHET
Trigger: TGTCTCATGCGGGAGCCTCCATGTCATCTGCTTCAT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp GTACCAATTGTGTGGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGATGGAAGTAGATCTGGGGTaGGGAAAATTTGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: VPIVWYYPVSGVPPEFLMEVDLG*GKFAFG
Trigger: TCCAAATGCAAATTTTCCCCACCCCAGATCTACTTC...CATCAGAAACTCTGGGGGTACTCCTGAAACAGGATAATACCACACAATTGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR TCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTCTTCATTTTTGTTGGTaGTCTGTGGGGTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFLHFCW*SVGFQL
Trigger: GAGCTGGAACCCCACAGATCACCAACAAAAATGAAG...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp GTACCAATTGTGTGGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGATGCTGATAATAGCTTCCTaGAAAGATCCATCAGATGTC +
Preference number: 4 (lower is better)
Translates to: VPIVWYYPVSGVPPEFLMLIIAS*KDPSDV
Trigger: GACATCTGATGGATCTTTTCAGGAAGCTATTATCAG...CATCAGAAACTCTGGGGGTACTCCTGAAACAGGATAATACCACACAATTGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR TCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTGATCCTTTTTCACTGTaGTGTCATCATTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFDPFSL*CHHYSW
Trigger: CCAGCTGTAATGATGACATCACAGTGAAAAAGGATC...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTAAGATGCTTGCTTTCTaGAGCCCTGGTTTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFKMLAF*SPGLVE
Trigger: CTCCACTAAACCAGGGCTTCAGAAAGCAAGCATCTT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGTTAAAGGCATTTCTTaGTCTAATTTGAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLVKGIS*SNLRAS
Trigger: AGAGGCTCTCAAATTAGATCAAGAAATGCCTTTAAC...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGTTAAAGGCATTTCTTaGTCTAATTTGAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVVKGIS*SNLRAS
Trigger: AGAGGCTCTCAAATTAGATCAAGAAATGCCTTTAAC...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTATTCACTTTCACTGTTTaGATCGATATTTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVFTFTV*IDIFLR
Trigger: CCTGAGGAAAATATCGATTCAAACAGTGAAAGTGAA...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTATCACTGGTCCTTTCTTaGGATACAGTATTTGTCATT +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVSLVLS*DTVFVI
Trigger: AATGACAAATACTGTATCTCAAGAAAGGACCAGTGA...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTTCACAGAGACCTTCTTaGGATTCTTCAGCAATACTA +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSSQRPS*DSSAIL
Trigger: TAGTATTGCTGAAGAATCTCAAGAAGGTCTCTGTGA...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACTCCTGGGCACACTGCTaGACATATACTTTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNSWAHC*TYTLAV
Trigger: AACTGCCAAAGTATATGTTCAGCAGTGTGCCCAGGA...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTTGTAAAAAGGACAGCTaGGAGCTATTGTCATCCAAA +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSCKKDS*ELLSSK
Trigger: TTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACA...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTCCCCGTTTTGACTTCTaGCTCTCCTCATCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFPRFDF*LSSSLF
Trigger: AAAGAGAGATGAGGAGAGGCAGAAGTCAAAACGGGG...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGAAAGATCTTTTGTCTTaGTTCGTCTTCCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLKDLLS*FVFPFL
Trigger: AAGGAAAGGGAAGACGAAGCAAGACAAAAGATCTTT...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGCTTTACTTAGTTGTTaGATCTCAACTTTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLALLSC*ISTLGD
Trigger: ATCTCCCAAAGTTGAGATGCAACAACTAAGTAAAGC...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAACATTGAGATACTTCTaGTTTGCAAAGAAAAGACAG +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGRETLRYF*FAKKRQ
Trigger: CTGTCTTTTCTTTGCAAAGCAGAAGTATCTCAATGT...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACCTCGCCCCGATTTACTaGCACAATCCACCAAATAAC +
Preference number: 4 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNLAPIY*HNPPNN
Trigger: GTTATTTGGTGGATTGTGGCAGTAAATCGGGGCGAG...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348476.7
CDS-3UTR CCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCTTTGTTGGTGATCTGTaGGGTTCCAGCTCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISFVGDL*GSSSAS
Trigger: GCTCGCTGAGCTGGAACCCCACAGATCACCAACAAA...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTTGTCATCATTACAGCTaGGAGATATTACCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSCHHYS*EILPKQ
Trigger: CTGCTTTGGTAATATCTCCCAGCTGTAATGATGACA...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAATTCCTCTTTTACTTTTaGTTCATGGTGATGAACAGT +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGREFLFYF*FMVMNS
Trigger: ACTGTTCATCACCATGAACCAAAAGTAAAAGAGGAA...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTCTTCCCTTTCCTTTTaGAGATTTTTCGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLSSLSF*RFFGFF
Trigger: AAAGAAGCCGAAAAATCTCCAAAAGGAAAGGGAAGA...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAATCCAATACAATCACTaGTCCTTTCTTGAGATACAG +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVIQYNH*SFLEIQ
Trigger: CTGTATCTCAAGAAAGGACCAGTGATTGTATTGGAT...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTTCACTAGTCAGTTGTTaGATGCATTGGTTTGACTCT +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSSLVSC*MHWFDS
Trigger: AGAGTCAAACCAATGCATCCAACAACTGACTAGTGA...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTCATTCTTTTCATTTTTaGCTGCAGCACTTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSHSFHF*LQHLFA
Trigger: AGCGAACAAGTGCTGCAGCCAAAAATGAAAAGAATG...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTTTCTCCTCCTGTCTATaGTTGCAACTTCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFFSSCL*LQLQTS
Trigger: TGAAGTCTGAAGTTGCAACCATAGACAGGAGGAGAA...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTATGGCAGCAAACTGCTaGGAAGGTAGAGAAAATGTT +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFMAANC*EGRENV
Trigger: AACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCAT...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAAATCTATCAGTCTGTaGAACAATTCACAGACAAAG +
Preference number: 4 (lower is better)
Translates to: FRVWGFMSMAANCWEGREKSISL*NNSQTK
Trigger: CTTTGTCTGTGAATTGTTCCACAGACTGATAGATTT...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTATTGTAGGAAGCAGCTaGATTCAAAATAGGAATGCC +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFIVGSS*IQNRNA
Trigger: GGCATTCCTATTTTGAATTCAGCTGCTTCCTACAAT...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTCTTTCTCTCCATCTTTaGTGTGCGGGGATATTCTTG +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFLSLHL*CAGIFL
Trigger: CAAGAATATCCCCGCACATCAAAGATGGAGAGAAAG...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS-3UTR GCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTTTCAGTCCTCTCCGTTaGAGACACCACACTTACAAC +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCFSPLR*RHHTYN
Trigger: GTTGTAAGTGTGGTGTCTGCAACGGAGAGGACTGAA...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCATTCAGTCCTCTCCGTTaGAGACACCACACTTACAAC +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSFSPLR*RHHTYN
Trigger: GTTGTAAGTGTGGTGTCTGCAACGGAGAGGACTGAA...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTTCTGAACTGAATATTTaGCGAACGGCAGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFSELNI*RTAVLL
Trigger: GAGGAGTACTGCCGTTCGGCAAATATTCAGTTCAGA...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACTCTGAACTGAATATTTaGCGAACGGCAGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNSELNI*RTAVLL
Trigger: GAGGAGTACTGCCGTTCGGCAAATATTCAGTTCAGA...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCACCCCGTTTTGACTTCTaGCTCTCCTCATCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSPRFDF*LSSSLF
Trigger: AAAGAGAGATGAGGAGAGGCAGAAGTCAAAACGGGG...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTCCCCGTTTTGACTTCTaGCTCTCCTCATCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCPRFDF*LSSSLF
Trigger: AAAGAGAGATGAGGAGAGGCAGAAGTCAAAACGGGG...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTCTCAGAGCTTTCAACTaGTACATCCTCAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFLRAFN*YILNAG
Trigger: ACCAGCATTGAGGATGTAGCAGTTGAAAGCTCTGAG...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTGATCTTCACTATCACTaGTTTGTCCTGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFDLHYH*FVLFHS
Trigger: AGAATGGAACAGGACAAAGCAGTGATAGTGAAGATC...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355431.8
ENST00000395168.7
CDS-3UTR GCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAACATTGAGATACTTCTaGTTTGCAAAGAAAAGACAG +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVTLRYF*FAKKRQ
Trigger: CTGTCTTTTCTTTGCAAAGCAGAAGTATCTCAATGT...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp GTACCAATTGTGTGGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGATGAAAGGACCCTTTACTTaGTCATCTTGTACCAATTGT +
Preference number: 4 (lower is better)
Translates to: VPIVWYYPVSGVPPEFLMKGPFT*SSCTNC
Trigger: ACAATTGGTACAAGATGACCAAGTAAAGGGTCCTTT...CATCAGAAACTCTGGGGGTACTCCTGAAACAGGATAATACCACACAATTGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR CCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTATCATTTTCTTCAGCTaGGCCATCTTCATCATCACT +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFIIFFS*AIFIIT
Trigger: AGTGATGATGAAGATGGCCCAGCTGAAGAAAATGAT...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTATTCCTCTTTTACTTTTaGTTCATGGTGATGAACAGT +
Preference number: 4 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVFLFYF*FMVMNS
Trigger: ACTGTTCATCACCATGAACCAAAAGTAAAAGAGGAA...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTTCTTCCCTTTCCTTTTaGAGATTTTTCGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSSSLSF*RFFGFF
Trigger: AAAGAAGCCGAAAAATCTCCAAAAGGAAAGGGAAGA...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCGGGGATTTATGTCCATaGCAGCAAACTGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISGDLCP*QQTAGK
Trigger: CTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCC...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGAGATACAATCCAGCCTaGAAAAGTATACAGGATATA +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLRYNPA*KSIQDI
Trigger: TATATCCTGTATACTTTTCCAGGCTGGATTGTATCT...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGCCTATGTTTAAAACATaGCCTTTATTAATACTGCCC +
Preference number: 4 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLPMFKT*PLLILP
Trigger: GGGCAGTATTAATAAAGGCCATGTTTTAAACATAGG...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp GTGGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTGATGAAGTAGATCTGGGGAAAATTTGCATTTaGAACAAGTTCCCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: VVLSCFRSTPRVSDEVDLGKICI*NKFPSK
Trigger: CTTACTTGGGAACTTGTTCCAAATGCAAATTTTCCC...CAGATCTACTTCATCAGAAACTCTGGGGGTACTCCTGAAACAGGATAATACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR TCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCATCCTTTCAGACAAAGTaGGGTACGTCTCAATGTTCG +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSSFQTK*GTSQCS
Trigger: CGAACATTGAGACGTACCTCACTTTGTCTGAAAGGA...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTTCCTTTCAGACAAAGTaGGGTACGTCTCAATGTTCG +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCSFQTK*GTSQCS
Trigger: CGAACATTGAGACGTACCTCACTTTGTCTGAAAGGA...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTCTAGTAATTCATCATTaGGACGGCGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFLVIHH*DGACLH
Trigger: ATGAAGACAAGCGCCGTCTCAATGATGAATTACTAG...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCAAGATGCTTGCTTTCTaGAGCCCTGGTTTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISKMLAF*SPGLVE
Trigger: CTCCACTAAACCAGGGCTTCAGAAAGCAAGCATCTT...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACAAGATGCTTGCTTTCTaGAGCCCTGGTTTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDKMLAF*SPGLVE
Trigger: CTCCACTAAACCAGGGCTTCAGAAAGCAAGCATCTT...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTAAACAGGTGGTTTGTTaGTTGGAGTACCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFKQVVC*LEYLCL
Trigger: AAGACAGAGGTACTCCAATCAACAAACCACCTGTTT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTGGTGATGAACAGTTCTaGACTGAATATTTGCCGAAC +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFGDEQF*TEYLPN
Trigger: GTTCGGCAAATATTCAGTTCAGAACTGTTCATCACC...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTCCTGGGCACACTGCTaGACATATACTTTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDSWAHC*TYTLAV
Trigger: AACTGCCAAAGTATATGTTCAGCAGTGTGCCCAGGA...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTTCTGAACTGAATATTTaGCGAACGGCAGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCSELNI*RTAVLL
Trigger: GAGGAGTACTGCCGTTCGGCAAATATTCAGTTCAGA...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACAGTTTCAAATCCATTTaGCGATTCCCTCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNSFKSI*RFPLTE
Trigger: CTCTGTGAGAGGGAATCGGCAAATGGATTTGAAACT...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTTTTATCATGTGCACTTaGTTGTCTACGATTTCTGTA +
Preference number: 4 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSFIMCT*LSTISV
Trigger: TACAGAAATCGTAGACAAGCAAGTGCACATGATAAA...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACAGGTGGTTTGTTGATTaGAGTACCTCTGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNRWFVD*STSVFH
Trigger: ATGGAAGACAGAGGTACTCCAATCAACAAACCACCT...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACATAGCCCAAAACAGGTaGTTTGTTGATTGGAGTACC +
Preference number: 4 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNIAQNR*FVDWST
Trigger: GGTACTCCAATCAACAAACCACCTGTTTTGGGCTAT...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTCTTCCTGCTTCATTCTaGCCAAATGATGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFLPASF*PNDEIF
Trigger: AAAGATTTCATCATTTGGCCAGAATGAAGCAGGAAG...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTATCCAATACAATCACTaGTCCTTTCTTGAGATACAG +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFIQYNH*SFLEIQ
Trigger: CTGTATCTCAAGAAAGGACCAGTGATTGTATTGGAT...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACACTGAAAAGTTATGTTaGACTACAGGAGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNTEKLC*TTGGRA
Trigger: TGCCCTACCTCCTGTAGTCCAACATAACTTTTCAGT...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTAGCACTTGTTCGCTTTaGGGTACGCTTTTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFSTCSL*GTLLLF
Trigger: AAAAAGCAAAAGCGTACCCCAAAGCGAACAAGTGCT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACTTCTCCTCCTGTCTATaGTTGCAACTTCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNFSSCL*LQLQTS
Trigger: TGAAGTCTGAAGTTGCAACCATAGACAGGAGGAGAA...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCACTAGTAATTCATCATTaGGACGGCGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSLVIHH*DGACLH
Trigger: ATGAAGACAAGCGCCGTCTCAATGATGAATTACTAG...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTGATCCTTTTTCACTGTaGTGTCATCATTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCDPFSL*CHHYSW
Trigger: CCAGCTGTAATGATGACATCACAGTGAAAAAGGATC...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTGATCGAACTAAACACTaGTCCTTTTTCACTGTGATG +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFDRTKH*SFFTVM
Trigger: CATCACAGTGAAAAAGGATCAGTGTTTAGTTCGATC...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTAAACAGGTGGTTTGTTaGTTGGAGTACCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCKQVVC*LEYLCL
Trigger: AAGACAGAGGTACTCCAATCAACAAACCACCTGTTT...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGTGATGAACAGTTCTaGACTGAATATTTGCCGAAC +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSGDEQF*TEYLPN
Trigger: GTTCGGCAAATATTCAGTTCAGAACTGTTCATCACC...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACCTCTTCCTCTTCATCTaGGTCTTTGTCAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDLFLFI*VFVRIL
Trigger: GAGGATTCTGACAAAGACTCAGATGAAGAGGAAGAG...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTTCACAGAGACCTTCTTaGGATTCTTCAGCAATACTA +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFSQRPS*DSSAIL
Trigger: TAGTATTGCTGAAGAATCTCAAGAAGGTCTCTGTGA...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACTGTAAAAAGGACAGCTaGGAGCTATTGTCATCCAAA +
Preference number: 4 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNCKKDS*ELLSSK
Trigger: TTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACA...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCTCTGAACTGAATATTTaGCGAACGGCAGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISSELNI*RTAVLL
Trigger: GAGGAGTACTGCCGTTCGGCAAATATTCAGTTCAGA...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACCTTCAGAGTCACATTTaGTTTCAGTTTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNLQSHI*FQFLPS
Trigger: AGAGGGAAGAAACTGAAAGCAAATGTGACTCTGAAG...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTCTGCTACATCCTCAATaGTGGTCTTATCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFLLHPQ*WSYPFH
Trigger: ATGAAAAGGATAAGACCAGCATTGAGGATGTAGCAG...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCCTCAGAGCTTTCAACTaGTACATCCTCAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISLRAFN*YILNAG
Trigger: ACCAGCATTGAGGATGTAGCAGTTGAAAGCTCTGAG...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCACTTTTCATTTTTGGCTaGAGCACTTGTTCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSLFIFG*STCSLW
Trigger: CCAAAGCGAACAAGTGCTGCAGCCAAAAATGAAAAG...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCTCCATGGCAGCAAACTaGTGGGAAGGTAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISSMAAN*WEGREN
Trigger: ATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGA...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTTTTATCATGTGCACTTaGTTGTCTACGATTTCTGTA +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFFIMCT*LSTISV
Trigger: TACAGAAATCGTAGACAAGCAAGTGCACATGATAAA...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTTTGATGTTTATCATGTaGACTTGCTTGTCTACGATT +
Preference number: 4 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFLMFIM*TCLSTI
Trigger: AATCGTAGACAAGCAAGTGCACATGATAAACATCAA...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTCTTCATCATCACTACTaGATGACTCAAGGATTTCAC +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFLHHHY*MTQGFH
Trigger: GTGAAATCCTTGAGTCATCCAGTAGTGATGATGAAG...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTTCCAAATCTACTTCATaGCAAACCAAGGTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCSKSTS*QTKVSG
Trigger: GCCTGAAACCTTGGTTTGCCATGAAGTAGATTTGGA...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAACTGAAAAGTTATGTTaGACTACAGGAGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSTEKLC*TTGGRA
Trigger: TGCCCTACCTCCTGTAGTCCAACATAACTTTTCAGT...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTCTGATAATAGCTTCCTaGAAAGATCCATCAGATGTC +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCLIIAS*KDPSDV
Trigger: GACATCTGATGGATCTTTTCAGGAAGCTATTATCAG...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGAAACAGGTGGTTTGTTaGTTGGAGTACCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLKQVVC*LEYLCL
Trigger: AAGACAGAGGTACTCCAATCAACAAACCACCTGTTT...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACGGTGATGAACAGTTCTaGACTGAATATTTGCCGAAC +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDGDEQF*TEYLPN
Trigger: GTTCGGCAAATATTCAGTTCAGAACTGTTCATCACC...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACCCCACTCATCATACCTaGCATTCCATCCATAGTAAT +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDPTHHT*HSIHSN
Trigger: ATTACTATGGATGGAATGTCAGGTATGATGAGTGGG...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTTCACTGGTCCTTTCTTaGGATACAGTATTTGTCATT +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFSLVLS*DTVFVI
Trigger: AATGACAAATACTGTATCTCAAGAAAGGACCAGTGA...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCCTTCGAGACTCATCTTaGCTAAGAGTAAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISLRDSS*LRVSGE
Trigger: TTCACCACTTACTCTTAGTCAAGATGAGTCTCGAAG...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAATATGTCCTAGGGGATaGATTCGGATGTTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSICPRG*IRMFFS
Trigger: AGAGAAAAACATCCGAATTCATCCCCTAGGACATAT...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS-3UTR TCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTACTGTTTGATGGACTaGGACAGACTCCCTTTAACA +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDYCLMD*DRLPLT
Trigger: TGTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTA...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACACTGGAGTTCCAAAATaGTCTGGATTTGTTAATGGA +
Preference number: 4 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNTGVPK*SGFVNG
Trigger: TCCATTAACAAATCCAGAGCATTTTGGAACTCCAGT...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCACTTCAGAGTCACATTTaGTTTCAGTTTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSLQSHI*FQFLPS
Trigger: AGAGGGAAGAAACTGAAAGCAAATGTGACTCTGAAG...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTAAAGATCTTTTGTCTTaGTTCGTCTTCCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFKDLLS*FVFPFL
Trigger: AAGGAAAGGGAAGACGAAGCAAGACAAAAGATCTTT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCACTGCTACATCCTCAATaGTGGTCTTATCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSLLHPQ*WSYPFH
Trigger: ATGAAAAGGATAAGACCAGCATTGAGGATGTAGCAG...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGAGTTTCAAATCCATTTaGCGATTCCCTCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLSFKSI*RFPLTE
Trigger: CTCTGTGAGAGGGAATCGGCAAATGGATTTGAAACT...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCAGTTTCAAATCCATTTaGCGATTCCCTCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISSFKSI*RFPLTE
Trigger: CTCTGTGAGAGGGAATCGGCAAATGGATTTGAAACT...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACCTTTTCATTTTTGGCTaGAGCACTTGTTCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDLFIFG*STCSLW
Trigger: CCAAAGCGAACAAGTGCTGCAGCCAAAAATGAAAAG...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTAAAGGACCCTTTACTTaGTCATCTTGTACCAATTGT +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFKGPFT*SSCTNC
Trigger: ACAATTGGTACAAGATGACCAAGTAAAGGGTCCTTT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACAAAGGACCCTTTACTTaGTCATCTTGTACCAATTGT +
Preference number: 4 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNKGPFT*SSCTNC
Trigger: ACAATTGGTACAAGATGACCAAGTAAAGGGTCCTTT...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCATTTGTTAATGGAAGCTaGTCAAGTGTCTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSFVNGS*SSVSLS
Trigger: AGAGAGTGAGACACTTGACCAGCTTCCATTAACAAA...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCATGTCATCATTACAGCTaGGAGATATTACCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSCHHYS*EILPKQ
Trigger: CTGCTTTGGTAATATCTCCCAGCTGTAATGATGACA...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTCTTCATCATCACTACTaGATGACTCAAGGATTTCAC +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCLHHHY*MTQGFH
Trigger: GTGAAATCCTTGAGTCATCCAGTAGTGATGATGAAG...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCATAGCCCAAAACAGGTaGTTTGTTGATTGGAGTACC +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISIAQNR*FVDWST
Trigger: GGTACTCCAATCAACAAACCACCTGTTTTGGGCTAT...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTCTTCCTGCTTCATTCTaGCCAAATGATGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFLPASF*PNDEIF
Trigger: AAAGATTTCATCATTTGGCCAGAATGAAGCAGGAAG...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTCCAAATCTACTTCATaGCAAACCAAGGTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDSKSTS*QTKVSG
Trigger: GCCTGAAACCTTGGTTTGCCATGAAGTAGATTTGGA...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACACTGAAAAGTTATGTTaGACTACAGGAGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDTEKLC*TTGGRA
Trigger: TGCCCTACCTCCTGTAGTCCAACATAACTTTTCAGT...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCACATTCTTTTCATTTTTaGCTGCAGCACTTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSHSFHF*LQHLFA
Trigger: AGCGAACAAGTGCTGCAGCCAAAAATGAAAAGAATG...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCTTCTCCTCCTGTCTATaGTTGCAACTTCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISFSSCL*LQLQTS
Trigger: TGAAGTCTGAAGTTGCAACCATAGACAGGAGGAGAA...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCATGGCAGCAAACTGCTaGGAAGGTAGAGAAAATGTT +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISMAANC*EGRENV
Trigger: AACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCAT...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCCTGATAATAGCTTCCTaGAAAGATCCATCAGATGTC +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISLIIAS*KDPSDV
Trigger: GACATCTGATGGATCTTTTCAGGAAGCTATTATCAG...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCTCACAGAGACCTTCTTaGGATTCTTCAGCAATACTA +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISSQRPS*DSSAIL
Trigger: TAGTATTGCTGAAGAATCTCAAGAAGGTCTCTGTGA...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACCTGCTACATCCTCAATaGTGGTCTTATCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDLLHPQ*WSYPFH
Trigger: ATGAAAAGGATAAGACCAGCATTGAGGATGTAGCAG...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCCTGCTACATCCTCAATaGTGGTCTTATCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISLLHPQ*WSYPFH
Trigger: ATGAAAAGGATAAGACCAGCATTGAGGATGTAGCAG...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTGCTTTACTTAGTTGTTaGATCTCAACTTTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCALLSC*ISTLGD
Trigger: ATCTCCCAAAGTTGAGATGCAACAACTAAGTAAAGC...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAAAAGGACCCTTTACTTaGTCATCTTGTACCAATTGT +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSKGPFT*SSCTNC
Trigger: ACAATTGGTACAAGATGACCAAGTAAAGGGTCCTTT...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTGTTAATGGAAGCTaGTCAAGTGTCTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDFVNGS*SSVSLS
Trigger: AGAGAGTGAGACACTTGACCAGCTTCCATTAACAAA...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGTTTGTTAATGGAAGCTaGTCAAGTGTCTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLFVNGS*SSVSLS
Trigger: AGAGAGTGAGACACTTGACCAGCTTCCATTAACAAA...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGTGTCATCATTACAGCTaGGAGATATTACCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLCHHYS*EILPKQ
Trigger: CTGCTTTGGTAATATCTCCCAGCTGTAATGATGACA...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACCTTCATCATCACTACTaGATGACTCAAGGATTTCAC +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDLHHHY*MTQGFH
Trigger: GTGAAATCCTTGAGTCATCCAGTAGTGATGATGAAG...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGATCATTTTCTTCAGCTaGGCCATCTTCATCATCACT +
Preference number: 4 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLIIFFS*AIFIIT
Trigger: AGTGATGATGAAGATGGCCCAGCTGAAGAAAATGAT...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCATCTTCCCTTTCCTTTTaGAGATTTTTCGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSSSLSF*RFFGFF
Trigger: AAAGAAGCCGAAAAATCTCCAAAAGGAAAGGGAAGA...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTCTTCCTGCTTCATTCTaGCCAAATGATGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCLPASF*PNDEIF
Trigger: AAAGATTTCATCATTTGGCCAGAATGAAGCAGGAAG...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTATCCAATACAATCACTaGTCCTTTCTTGAGATACAG +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCIQYNH*SFLEIQ
Trigger: CTGTATCTCAAGAAAGGACCAGTGATTGTATTGGAT...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTTACAGTTTCTTCAGCTaGACTATCAAATCTTTCACT +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFYSFFS*TIKSFT
Trigger: AGTGAAAGATTTGATAGTCCAGCTGAAGAAACTGTA...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTAGATACAATCCAGCCTaGAAAAGTATACAGGATATA +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFRYNPA*KSIQDI
Trigger: TATATCCTGTATACTTTTCCAGGCTGGATTGTATCT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTCCTATGTTTAAAACATaGCCTTTATTAATACTGCCC +
Preference number: 4 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFPMFKT*PLLILP
Trigger: GGGCAGTATTAATAAAGGCCATGTTTTAAACATAGG...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACGTTAAAGGCATTTCTTaGTCTAATTTGAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDVKGIS*SNLRAS
Trigger: AGAGGCTCTCAAATTAGATCAAGAAATGCCTTTAAC...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGTTCACTTTCACTGTTTaGATCGATATTTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLFTFTV*IDIFLR
Trigger: CCTGAGGAAAATATCGATTCAAACAGTGAAAGTGAA...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCTTCACTTTCACTGTTTaGATCGATATTTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISFTFTV*IDIFLR
Trigger: CCTGAGGAAAATATCGATTCAAACAGTGAAAGTGAA...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR TCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCTCACTGGTCCTTTCTTaGGATACAGTATTTGTCATT +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISSLVLS*DTVFVI
Trigger: AATGACAAATACTGTATCTCAAGAAAGGACCAGTGA...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCAAAGATCTTTTGTCTTaGTTCGTCTTCCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISKDLLS*FVFPFL
Trigger: AAGGAAAGGGAAGACGAAGCAAGACAAAAGATCTTT...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR GCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCATTTATCATGTGCACTTaGTTGTCTACGATTTCTGTA +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSFIMCT*LSTISV
Trigger: TACAGAAATCGTAGACAAGCAAGTGCACATGATAAA...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCAAAGGACCCTTTACTTaGTCATCTTGTACCAATTGT +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISKGPFT*SSCTNC
Trigger: ACAATTGGTACAAGATGACCAAGTAAAGGGTCCTTT...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACCTTCCTGCTTCATTCTaGCCAAATGATGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDLPASF*PNDEIF
Trigger: AAAGATTTCATCATTTGGCCAGAATGAAGCAGGAAG...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCATCCAATACAATCACTaGTCCTTTCTTGAGATACAG +
Preference number: 4 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISIQYNH*SFLEIQ
Trigger: CTGTATCTCAAGAAAGGACCAGTGATTGTATTGGAT...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CCA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTTACAGTTTCTTCAGCTaGACTATCAAATCTTTCACT +
Preference number: 4 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCYSFFS*TIKSFT
Trigger: AGTGAAAGATTTGATAGTCCAGCTGAAGAAACTGTA...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCATACAGTTTCTTCAGCTaGACTATCAAATCTTTCACT +
Preference number: 4 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSYSFFS*TIKSFT
Trigger: AGTGAAAGATTTGATAGTCCAGCTGAAGAAACTGTA...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
3UTR CAA 72 bp CTGGGTAATATTTTGATGTTTATCATGTGCACTTGCTaGTCTACGATTTCTGTAACACCTGAAAGCTTTATT +
Preference number: 4 (lower is better)
Translates to: LGNILMFIMCTC*STISVTPESFI
Trigger: AATAAAGCTTTCAGGTGTTACAGAAATCGTAGACAAGCAAGTGCACATGATAAACATCAAAATATTACCCAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGTTGATGTTTATCATGTaGACTTGCTTGTCTACGATT +
Preference number: 4 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLLMFIM*TCLSTI
Trigger: AATCGTAGACAAGCAAGTGCACATGATAAACATCAA...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR GCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGACATTGAGATACTTCTaGTTTGCAAAGAAAAGACAG +
Preference number: 4 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLTLRYF*FAKKRQ
Trigger: CTGTCTTTTCTTTGCAAAGCAGAAGTATCTCAATGT...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGTACAGTTTCTTCAGCTaGACTATCAAATCTTTCACT +
Preference number: 4 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLYSFFS*TIKSFT
Trigger: AGTGAAAGATTTGATAGTCCAGCTGAAGAAACTGTA...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGAAATCTATCAGTCTGTaGAACAATTCACAGACAAAG +
Preference number: 4 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLKSISL*NNSQTK
Trigger: CTTTGTCTGTGAATTGTTCCACAGACTGATAGATTT...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CCA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACAAATCTATCAGTCTGTaGAACAATTCACAGACAAAG +
Preference number: 4 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDKSISL*NNSQTK
Trigger: CTTTGTCTGTGAATTGTTCCACAGACTGATAGATTT...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS GCA 90 bp GCGGCTGCAGTTCCTGCGCCGGGTTCCCCACTCGCCCCGATTTACTaGCACAATCCACCAAATAACAAGCTGTTGAGCAGACTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: AAAVPAPGSPLAPIY*HNPPNNKLLSRLAS
Trigger: AGAAGCGAGTCTGCTCAACAGCTTGTTATTTGGTGGATTGTGGCAGTAAATCGGGGCGAGTGGGGAACCCGGCGCAGGAACTGCAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348476.7
CDS CCA 90 bp GTGGGGTTCCAGCTCAGCGAGCTATCTTCGCAGTCGCTAGAACTATaGGGAGGGGGAAAGACAGGCACAGACATAATCAGTCAACTGCGG +
Preference number: 5 (lower is better)
Translates to: VGFQLSELSSQSLEL*GGGKTGTDIISQLR
Trigger: CCGCAGTTGACTGATTATGTCTGTGCCTGTCTTTCCCCCTCCCCATAGTTCTAGCGACTGCGAAGATAGCTCGCTGAGCTGGAACCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431317.6
CDS CCA 90 bp TCCAGCTCCCTTCCCTGCTGTCAACTGCAGGACCTTTCTTTTGACTaGGTGGCGCAGCCTTCTTTGAGGCCACTGTTTAGGGCACAAGTG +
Preference number: 5 (lower is better)
Translates to: SSSLPCCQLQDLSFD*VAQPSLRPLFRAQV
Trigger: CACTTGTGCCCTAAACAGTGGCCTCAAAGAAGGCTGCGCCACCCAGTCAAAAGAAAGGTCCTGCAGTTGACAGCAGGGAAGGGAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553355.1
CDS-3UTR CAA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGTTTTGGCTGCAGCACTaGTTCGCTTTGGGGTACGCT +
Preference number: 5 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLFWLQH*FALGYA
Trigger: AGCGTACCCCAAAGCGAACAAGTGCTGCAGCCAAAA...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAAAGGCACCTCGGTACTaGGCACTGACATCGGTTCCC +
Preference number: 5 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKKAPRY*ALTSVP
Trigger: GGGAACCGATGTCAGTGCCAAGTACCGAGGTGCCTT...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAAAGGCACCTCGGTACTaGGCACTGACATCGGTTCCC +
Preference number: 5 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVKAPRY*ALTSVP
Trigger: GGGAACCGATGTCAGTGCCAAGTACCGAGGTGCCTT...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGTTCTTTGGTCCACCTTaGTCCAAAGGCCAGATTATC +
Preference number: 5 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLFFGPP*SKGQII
Trigger: GATAATCTGGCCTTTGGACAAAGGTGGACCAAAGAA...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGTGTTTGATGAGAGGGTaGATTTTAAAGGAGGTCGTC +
Preference number: 5 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLCLMRG*ILKEVV
Trigger: GACGACCTCCTTTAAAATCAACCCTCTCATCAAACA...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGGTTGGATGCATTGGTTaGACTCTGCTATCAATGATG +
Preference number: 5 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLVGCIG*TLLSMM
Trigger: CATCATTGATAGCAGAGTCAAACCAATGCATCCAAC...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS GCA 90 bp CAGGAGTACCTTAACTTTCACCAGCCTTTTCACAGTCTTAATCTTTaGCTCACAGAAGGCACCTCGGTACTTGGCACTGACATCGGTTCC +
Preference number: 5 (lower is better)
Translates to: QEYLNFHQPFHSLNL*LTEGTSVLGTDIGS
Trigger: GGAACCGATGTCAGTGCCAAGTACCGAGGTGCCTTCTGTGAGGCAAAGATTAAGACTGTGAAAAGGCTGGTGAAAGTTAAGGTACTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000424658.5
ENST00000431317.6
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAACCGCCTTCATTTTTGTaGGTGATCTGTGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGREPPSFL*VICGVP
Trigger: TGGAACCCCACAGATCACCAACAAAAATGAAGGCGG...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTAAGGCACCTCGGTACTaGGCACTGACATCGGTTCCC +
Preference number: 5 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFKAPRY*ALTSVP
Trigger: GGGAACCGATGTCAGTGCCAAGTACCGAGGTGCCTT...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TCTTGTACCAATTGTGTGGTATTATCCTGTTTCAGGAGTACCCCCAGAGTTTCTAAGGCACCTCGGTACTaGGCACTGACATCGGTTCCC +
Preference number: 5 (lower is better)
Translates to: SCTNCVVLSCFRSTPRVSKAPRY*ALTSVP
Trigger: GGGAACCGATGTCAGTGCCAAGTACCGAGGTGCCTT...AGAAACTCTGGGGGTACTCCTGAAACAGGATAATACCACACAATTGGTACAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR CAA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGTCAGATTCCGGTAGATaGAGAATGTCTACTTCCTTA +
Preference number: 5 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLSDSGR*RMSTSL
Trigger: TAAGGAAGTAGACATTCTCAATCTACCGGAATCTGA...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGAGCTGCTGGAGGAAGTaGTCCCTCTCTTCAGGATCA +
Preference number: 5 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLSCWRK*SLSSGS
Trigger: TGATCCTGAAGAGAGGGACAACTTCCTCCAGCAGCT...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAAGCTGCTGGAGGAAGTaGTCCCTCTCTTCAGGATCA +
Preference number: 5 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVSCWRK*SLSSGS
Trigger: TGATCCTGAAGAGAGGGACAACTTCCTCCAGCAGCT...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGTATTTTACTTTCACTTaGGTTCCTGTTAGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLYFTFT*VPVRQG
Trigger: ACCCTGCCTAACAGGAACCAAAGTGAAAGTAAAATA...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTACCGCCTTCATTTTTGTaGGTGATCTGTGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVPPSFL*VICGVP
Trigger: TGGAACCCCACAGATCACCAACAAAAATGAAGGCGG...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAATTCAGTCCTCTCCGTaGCAGACACCACACTTACAA +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGREIQSSP*QTPHLQ
Trigger: TTGTAAGTGTGGTGTCTGCAACGGAGAGGACTGAAT...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAACCCAAAACAGGTGGTTaGTTGATTGGAGTACCTCTG +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGREPKTGG*LIGVPL
Trigger: CAGAGGTACTCCAATCAACAAACCACCTGTTTTGGG...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGATCACTGGTCCTTTCTaGAGATACAGTATTTGTCAT +
Preference number: 5 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLITGPF*RYSICH
Trigger: ATGACAAATACTGTATCTCAAGAAAGGACCAGTGAT...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAACAGCACTTGTTCGCTTaGGGGTACGCTTTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGREQHLFA*GYAFAF
Trigger: AAAAGCAAAAGCGTACCCCAAAGCGAACAAGTGCTG...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp GGACTGAGACAGACTCCCTTTAACACAGGCAAGGCTGCAGGATGCAACCTCCTGTTTGCTAAGTGCCCTTaGTTCTATATCACAACAAAC +
Preference number: 5 (lower is better)
Translates to: GLRQTPFNTGKAAGCNLLFAKCP*FYITTN
Trigger: GTTTGTTGTGATATAGAACAAAGGGCACTTAGCAAA...CAGGAGGTTGCATCCTGCAGCCTTGCCTGTGTTAAAGGGAGTCTGTCTCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS TCA 90 bp GACAAGAGGAACGGAAGTCCCAATAAGAAAACATTCCCTCAAACCTaGATCTCTAAGCAGGAACAAAGCGCTGTTGTACCCCAGACAGGT +
Preference number: 5 (lower is better)
Translates to: DKRNGSPNKKTFPQT*ISKQEQSAVVPQTG
Trigger: ACCTGTCTGGGGTACAACAGCGCTTTGTTCCTGCTTAGAGATTCAGGTTTGAGGGAATGTTTTCTTATTGGGACTTCCGTTCCTCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553355.1
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAACCTAGTAATTCATCATaGAGACGGCGCTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGREPSNSS*RRRLSS
Trigger: TGAAGACAAGCGCCGTCTCAATGATGAATTACTAGG...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTAGCTGCTGGAGGAAGTaGTCCCTCTCTTCAGGATCA +
Preference number: 5 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFSCWRK*SLSSGS
Trigger: TGATCCTGAAGAGAGGGACAACTTCCTCCAGCAGCT...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTACCCAAAACAGGTGGTTaGTTGATTGGAGTACCTCTG +
Preference number: 5 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVPKTGG*LIGVPL
Trigger: CAGAGGTACTCCAATCAACAAACCACCTGTTTTGGG...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAACCTTCAGAGTCACATTaGCTTTCAGTTTCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGREPSESH*LSVSSL
Trigger: GAGGGAAGAAACTGAAAGCAAATGTGACTCTGAAGG...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGCCCGATCAGAGGCATaGCATCCTCATCTTCTTTTA +
Preference number: 5 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVARSEA*HPHLLL
Trigger: TAAAAGAAGATGAGGATGCAATGCCTCTGATCGGGC...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGCCCGATCAGAGGCATaGCATCCTCATCTTCTTTTA +
Preference number: 5 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLARSEA*HPHLLL
Trigger: TAAAAGAAGATGAGGATGCAATGCCTCTGATCGGGC...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGCAGCACTTGTTCGCTTaGGGGTACGCTTTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLQHLFA*GYAFAF
Trigger: AAAAGCAAAAGCGTACCCCAAAGCGAACAAGTGCTG...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAGCAATGTCAAACCAGTaGAGTGCTTTCTGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGREAMSNQ*SAFCGC
Trigger: ACAACCACAGAAAGCACTCAACTGGTTTGACATTGC...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS GCA 90 bp TGCTTAATTCTTAACTTTCACCAGCCTTTTCACAGTCTTAATCTTTaGCTCACAGAAGGCACCTCGGTACTTGGCACTGACATCGGTTCC +
Preference number: 5 (lower is better)
Translates to: CLILNFHQPFHSLNL*LTEGTSVLGTDIGS
Trigger: GGAACCGATGTCAGTGCCAAGTACCGAGGTGCCTTCTGTGAGGCAAAGATTAAGACTGTGAAAAGGCTGGTGAAAGTTAAGAATTAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR CAA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTCCGCCTTCATTTTTGTaGGTGATCTGTGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFPPSFL*VICGVP
Trigger: TGGAACCCCACAGATCACCAACAAAAATGAAGGCGG...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TATGTATCAGGCACTACTCTATGTGTTGGGCATAGAACAAGTCAGACGTTTCCTCCGCCTTCATTTTTGTaGGTGATCTGTGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: YVSGTTLCVGHRTSQTFPPPSFL*VICGVP
Trigger: TGGAACCCCACAGATCACCAACAAAAATGAAGGCGG...AGGAAACGTCTGACTTGTTCTATGCCCAACACATAGAGTAGTGCCTGATACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR CAA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTACCTAGTAATTCATCATaGAGACGGCGCTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVPSNSS*RRRLSS
Trigger: TGAAGACAAGCGCCGTCTCAATGATGAATTACTAGG...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAAAACAGGTGGTTTGTaGATTGGAGTACCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGREKTGGL*IGVPLS
Trigger: AGACAGAGGTACTCCAATCAACAAACCACCTGTTTT...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTATTCTTTGGTCCACCTTaGTCCAAAGGCCAGATTATC +
Preference number: 5 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVFFGPP*SKGQII
Trigger: GATAATCTGGCCTTTGGACAAAGGTGGACCAAAGAA...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAAGCCATACGGCATGTTaGATGAGAGGGTTGATTTTA +
Preference number: 5 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKSHTAC*MRGLIL
Trigger: TAAAATCAACCCTCTCATCAAACATGCCGTATGGCT...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAGAAAGATCTTTTGTCTaGCTTCGTCTTCCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGREERSFV*LRLPFP
Trigger: AGGAAAGGGAAGACGAAGCAAGACAAAAGATCTTTC...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAGTTGGATGCATTGGTTaGACTCTGCTATCAATGATG +
Preference number: 5 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKVGCIG*TLLSMM
Trigger: CATCATTGATAGCAGAGTCAAACCAATGCATCCAAC...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTCCTCCTGTCTATGGTaGCAACTTCAGACTTCAAAG +
Preference number: 5 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLSSCLW*QLQTSK
Trigger: CTTTGAAGTCTGAAGTTGCAACCATAGACAGGAGGA...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS CCA 90 bp ATGCTGGTCTTATCCTTTTCATCCAAATCATCCAAATCTACTTCATaGCAAACCAAGGTTTCAGGCCCGATCAGAGGCATTGCATCCTCA +
Preference number: 5 (lower is better)
Translates to: MLVLSFSSKSSKSTS*QTKVSGPIRGIASS
Trigger: TGAGGATGCAATGCCTCTGATCGGGCCTGAAACCTTGGTTTGCCATGAAGTAGATTTGGATGATTTGGATGAAAAGGATAAGACCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000417477.2
ENST00000431317.6
CDS CCA 90 bp AGTGCTTTCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATaGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTATCACCTGC +
Preference number: 5 (lower is better)
Translates to: SAFCGCNSGFGDLCP*QQTAGKVEKMFITC
Trigger: GCAGGTGATAAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGAAAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS CCA 90 bp CAGCCTTCTTTGAGGCCACTGTTTAGGGCACAAGTGCTATTAAAATaGTGCGACCAGTATATTCTCCAATTCCGAAAGGCAATACACATC +
Preference number: 5 (lower is better)
Translates to: QPSLRPLFRAQVLLK*CDQYILQFRKAIHI
Trigger: GATGTGTATTGCCTTTCGGAATTGGAGAATATACTGGTCGCACCATTTTAATAGCACTTGTGCCCTAAACAGTGGCCTCAAAGAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553355.1
CDS-3UTR CAA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACAAGGCACCTCGGTACTaGGCACTGACATCGGTTCCC +
Preference number: 5 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDKAPRY*ALTSVP
Trigger: GGGAACCGATGTCAGTGCCAAGTACCGAGGTGCCTT...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAATCAGATTCCGGTAGATaGAGAATGTCTACTTCCTTA +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGRESDSGR*RMSTSL
Trigger: TAAGGAAGTAGACATTCTCAATCTACCGGAATCTGA...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAATCAGATTCCGGTAGATaGAGAATGTCTACTTCCTTA +
Preference number: 5 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKSDSGR*RMSTSL
Trigger: TAAGGAAGTAGACATTCTCAATCTACCGGAATCTGA...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTAGCTGCTGGAGGAAGTaGTCCCTCTCTTCAGGATCA +
Preference number: 5 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFSCWRK*SLSSGS
Trigger: TGATCCTGAAGAGAGGGACAACTTCCTCCAGCAGCT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAATCTTCATCTGAGTCTTaGTCAGAATCCTCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGRESSSES*SESSCF
Trigger: AAAACAGGAGGATTCTGACAAAGACTCAGATGAAGA...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGTCTTCCCTTTCCTTTaGGAGATTTTTCGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVVFPFL*EIFRLL
Trigger: AAGAAGCCGAAAAATCTCCAAAAGGAAAGGGAAGAC...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAACTAAAGAAAGATCTTTaGTCTTGCTTCGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: SGFGDLCPWQQTAGKVEKLKKDL*SCFVFP
Trigger: AGGGAAGACGAAGCAAGACAAAAGATCTTTCTTTAG...TTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTGCCCGATCAGAGGCATaGCATCCTCATCTTCTTTTA +
Preference number: 5 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFARSEA*HPHLLL
Trigger: TAAAAGAAGATGAGGATGCAATGCCTCTGATCGGGC...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAATCTGCTCTCTCTCTCTaGTACAATTATACTACAGGT +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGRESALSL*YNYTTG
Trigger: ACCTGTAGTATAATTGTACAAGAGAGAGAGAGCAGA...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTCAGCACTTGTTCGCTTaGGGGTACGCTTTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFQHLFA*GYAFAF
Trigger: AAAAGCAAAAGCGTACCCCAAAGCGAACAAGTGCTG...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS GCA 90 bp CTCCTTCCTCTGTTCGTCTTCTTTGCAATTACTGGAGTTCCAAAATaGTCTGGATTTGTTAATGGAAGCTGGTCAAGTGTCTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: LLPLFVFFAITGVPK*SGFVNGSWSSVSLS
Trigger: AGAGAGTGAGACACTTGACCAGCTTCCATTAACAAATCCAGAGCATTTTGGAACTCCAGTAATTGCAAAGAAGACGAACAGAGGAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
ENST00000445108.5
CDS GCA 90 bp TTTCTCTCCATCTTTGATGTGCGGGGATATTCTTGCAGGAGATCGTaGAAGTTTCTGTGGCTTAGATACATTAAGATGCTTTACTGGGGT +
Preference number: 5 (lower is better)
Translates to: FLSIFDVRGYSCRRS*KFLWLRYIKMLYWG
Trigger: ACCCCAGTAAAGCATCTTAATGTATCTAAGCCACAGAAACTTGCACGATCTCCTGCAAGAATATCCCCGCACATCAAAGATGGAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS GCA 90 bp CCTTCTTTGAGGCCACTGTTTAGGGCACAAGTGCTATTAAAATGGTaGGACCAGTATATTCTCCAATTCCGAAAGGCAATACACATCATC +
Preference number: 5 (lower is better)
Translates to: PSLRPLFRAQVLLKW*DQYILQFRKAIHII
Trigger: GATGATGTGTATTGCCTTTCGGAATTGGAGAATATACTGGTCGCACCATTTTAATAGCACTTGTGCCCTAAACAGTGGCCTCAAAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553355.1
CDS-3UTR CAA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTCTCTGTTCGTCTTCTTaGCAATTACTGGAGTTCCAA +
Preference number: 5 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSLCSSS*QLLEFQ
Trigger: TTGGAACTCCAGTAATTGCAAAGAAGACGAACAGAG...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTATTTTTAAGAAGATGCTaGCTTTCTGAAGCCCTGGTT +
Preference number: 5 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVFLRRC*LSEALV
Trigger: AACCAGGGCTTCAGAAAGCAAGCATCTTCTTAAAAA...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTTTTTAAGAAGATGCTaGCTTTCTGAAGCCCTGGTT +
Preference number: 5 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLFLRRC*LSEALV
Trigger: AACCAGGGCTTCAGAAAGCAAGCATCTTCTTAAAAA...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGAAGGTCCATATAAATTaGCTTCCATACAGCACCACT +
Preference number: 5 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLKVHIN*LPYSTT
Trigger: AGTGGTGCTGTATGGAAGCAAATTTATATGGACCTT...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAATTTCCTCTTTTACTTTaGGTTCATGGTGATGAACAG +
Preference number: 5 (lower is better)
Translates to: FRVWGFMSMAANCWEGREFPLLL*VHGDEQ
Trigger: CTGTTCATCACCATGAACCAAAAGTAAAAGAGGAAA...TTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTATCTTCATCTGAGTCTTaGTCAGAATCCTCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVSSSES*SESSCF
Trigger: AAAACAGGAGGATTCTGACAAAGACTCAGATGAAGA...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTCTGCTCTCTCTCTCTaGTACAATTATACTACAGGT +
Preference number: 5 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLSALSL*YNYTTG
Trigger: ACCTGTAGTATAATTGTACAAGAGAGAGAGAGCAGA...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCATTTTGGCTGCAGCACTaGTTCGCTTTGGGGTACGCT +
Preference number: 5 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSFWLQH*FALGYA
Trigger: AGCGTACCCCAAAGCGAACAAGTGCTGCAGCCAAAA...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACTGTGCGGGGATATTCTaGCAGGAGATCGTGCAAGTT +
Preference number: 5 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNCAGIF*QEIVQV
Trigger: AACTTGCACGATCTCCTGCAAGAATATCCCCGCACA...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS-3UTR CAA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAATCATGTGCACTTGCTaGTCTACGATTTCTGTAACA +
Preference number: 5 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVIMCTC*STISVT
Trigger: TGTTACAGAAATCGTAGACAAGCAAGTGCACATGAT...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGATCATGTGCACTTGCTaGTCTACGATTTCTGTAACA +
Preference number: 5 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLIMCTC*STISVT
Trigger: TGTTACAGAAATCGTAGACAAGCAAGTGCACATGAT...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGTTTATCATGTGCACTaGCTTGTCTACGATTTCTGT +
Preference number: 5 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLVYHVH*LVYDFC
Trigger: ACAGAAATCGTAGACAAGCAAGTGCACATGATAAAC...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS GCA 90 bp GGCAGGTGGAATAGAAACAAGAGAGTTAGACTCAGAGCTTTCAACTaGTACATCCTCAATGCTGGTCTTATCCTTTTCATCCAAATCATC +
Preference number: 5 (lower is better)
Translates to: GRWNRNKRVRLRAFN*YILNAGLILFIQII
Trigger: GATGATTTGGATGAAAAGGATAAGACCAGCATTGAGGATGTAGCAGTTGAAAGCTCTGAGTCTAACTCTCTTGTTTCTATTCCACCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000417477.2
ENST00000431317.6
CDS-3UTR CAA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTCTGCCGCCTTCATTTTaGTTGGTGATCTGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCLPPSF*LVICGV
Trigger: AACCCCACAGATCACCAACAAAAATGAAGGCGGCAG...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGTCATCTTGTACCAATaGTGTGGTATTATCCTGTTT +
Preference number: 5 (lower is better)
Translates to: CNSGFGDLCPWQQTAGKVVILYQ*CGIILF
Trigger: AAACAGGATAATACCACACAATTGGTACAAGATGAC...TACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTATTCAGTCCTCTCCGTaGCAGACACCACACTTACAA +
Preference number: 5 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFIQSSP*QTPHLQ
Trigger: TTGTAAGTGTGGTGTCTGCAACGGAGAGGACTGAAT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTTTTTTAAGAAGATGCTaGCTTTCTGAAGCCCTGGTT +
Preference number: 5 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSFLRRC*LSEALV
Trigger: AACCAGGGCTTCAGAAAGCAAGCATCTTCTTAAAAA...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTAAAACAGGTGGTTTGTaGATTGGAGTACCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFKTGGL*IGVPLS
Trigger: AGACAGAGGTACTCCAATCAACAAACCACCTGTTTT...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TCTGTGGTTGTAATTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTTTCCTCTTTTACTTTaGGTTCATGGTGATGAACAG +
Preference number: 5 (lower is better)
Translates to: SVVVIQGLGIYVHGSKLLFPLLL*VHGDEQ
Trigger: CTGTTCATCACCATGAACCAAAAGTAAAAGAGGAAA...CAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAATTACAACCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTAGCCATACGGCATGTTaGATGAGAGGGTTGATTTTA +
Preference number: 5 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFSHTAC*MRGLIL
Trigger: TAAAATCAACCCTCTCATCAAACATGCCGTATGGCT...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGATGCAACCTCCTGTAAAAAGGACAGCTGAGAGCTATTGTCATCCAAAGAGTCTAAAGAAAGATCTTTaGTCTTGCTTCGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: RMQPPVKRTAESYCHPKSLKKDL*SCFVFP
Trigger: AGGGAAGACGAAGCAAGACAAAAGATCTTTCTTTAG...ACTCTTTGGATGACAATAGCTCTCAGCTGTCCTTTTTACAGGAGGTTGCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACGCCCGATCAGAGGCATaGCATCCTCATCTTCTTTTA +
Preference number: 5 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNARSEA*HPHLLL
Trigger: TAAAAGAAGATGAGGATGCAATGCCTCTGATCGGGC...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCTTTTGGCTGCAGCACTaGTTCGCTTTGGGGTACGCT +
Preference number: 5 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISFWLQH*FALGYA
Trigger: AGCGTACCCCAAAGCGAACAAGTGCTGCAGCCAAAA...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTGGCTGCAGCACTaGTTCGCTTTGGGGTACGCT +
Preference number: 5 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDFWLQH*FALGYA
Trigger: AGCGTACCCCAAAGCGAACAAGTGCTGCAGCCAAAA...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTTCTTTCTCTCCATCTTaGATGTGCGGGGATATTCTT +
Preference number: 5 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFSFSPS*MCGDIL
Trigger: AAGAATATCCCCGCACATCAAAGATGGAGAGAAAGA...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS GCA 90 bp TCTGTGTTTATCTTTCTCTCCATCTTTGATGTGCGGGGATATTCTTaGAGGAGATCGTGCAAGTTTCTGTGGCTTAGATACATTAAGATG +
Preference number: 5 (lower is better)
Translates to: SVFIFLSIFDVRGYS*RRSCKFLWLRYIKM
Trigger: CATCTTAATGTATCTAAGCCACAGAAACTTGCACGATCTCCTGCAAGAATATCCCCGCACATCAAAGATGGAGAGAAAGATAAACACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS-3UTR CAA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTAAGGTCCATATAAATTaGCTTCCATACAGCACCACT +
Preference number: 5 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFKVHIN*LPYSTT
Trigger: AGTGGTGCTGTATGGAAGCAAATTTATATGGACCTT...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTCCTTCAGAGTCACATTaGCTTTCAGTTTCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFPSESH*LSVSSL
Trigger: GAGGGAAGAAACTGAAAGCAAATGTGACTCTGAAGG...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTTATTTTACTTTCACTTaGGTTCCTGTTAGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFYFTFT*VPVRQG
Trigger: ACCCTGCCTAACAGGAACCAAAGTGAAAGTAAAATA...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACTTCTTTGGTCCACCTTaGTCCAAAGGCCAGATTATC +
Preference number: 5 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNFFGPP*SKGQII
Trigger: GATAATCTGGCCTTTGGACAAAGGTGGACCAAAGAA...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACGCAATGTCAAACCAGTaGAGTGCTTTCTGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNAMSNQ*SAFCGC
Trigger: ACAACCACAGAAAGCACTCAACTGGTTTGACATTGC...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTGCAATGTCAAACCAGTaGAGTGCTTTCTGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFAMSNQ*SAFCGC
Trigger: ACAACCACAGAAAGCACTCAACTGGTTTGACATTGC...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTGTTTATCATGTGCACTaGCTTGTCTACGATTTCTGT +
Preference number: 5 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFVYHVH*LVYDFC
Trigger: ACAGAAATCGTAGACAAGCAAGTGCACATGATAAAC...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS GCA 90 bp AATTATACTACAGGTACCAGAGGCAACATTAGTTTCAAATCCATTTaGCGATTCCCTCTCACAGAGACCTTCTTGAGATTCTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: NYTTGTRGNISFKSI*RFPLTETFLRFFSN
Trigger: ATTGCTGAAGAATCTCAAGAAGGTCTCTGTGAGAGGGAATCGGCAAATGGATTTGAAACTAATGTTGCCTCTGGTACCTGTAGTATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000417477.2
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCACCTAGTAATTCATCATaGAGACGGCGCTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSPSNSS*RRRLSS
Trigger: TGAAGACAAGCGCCGTCTCAATGATGAATTACTAGG...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGATTCAGTCCTCTCCGTaGCAGACACCACACTTACAA +
Preference number: 5 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLIQSSP*QTPHLQ
Trigger: TTGTAAGTGTGGTGTCTGCAACGGAGAGGACTGAAT...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCATTCAGTCCTCTCCGTaGCAGACACCACACTTACAA +
Preference number: 5 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISIQSSP*QTPHLQ
Trigger: TTGTAAGTGTGGTGTCTGCAACGGAGAGGACTGAAT...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGCCCAAAACAGGTGGTTaGTTGATTGGAGTACCTCTG +
Preference number: 5 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLPKTGG*LIGVPL
Trigger: CAGAGGTACTCCAATCAACAAACCACCTGTTTTGGG...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCACCTTCAGAGTCACATTaGCTTTCAGTTTCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSPSESH*LSVSSL
Trigger: GAGGGAAGAAACTGAAAGCAAATGTGACTCTGAAGG...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACTGTTTGATGAGAGGGTaGATTTTAAAGGAGGTCGTC +
Preference number: 5 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNCLMRG*ILKEVV
Trigger: GACGACCTCCTTTAAAATCAACCCTCTCATCAAACA...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTAGCCATACGGCATGTTaGATGAGAGGGTTGATTTTA +
Preference number: 5 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFSHTAC*MRGLIL
Trigger: TAAAATCAACCCTCTCATCAAACATGCCGTATGGCT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACGAAAGATCTTTTGTCTaGCTTCGTCTTCCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNERSFV*LRLPFP
Trigger: AGGAAAGGGAAGACGAAGCAAGACAAAAGATCTTTC...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TTTGGGGATTTATGTCCATGGCAGCAAACTGCTGGGAAGGTAGAGAAAATGTTTGTACATTTACTTGAATaGTCTAGGACAGGAAGATCT +
Preference number: 5 (lower is better)
Translates to: FGDLCPWQQTAGKVEKMFVHLLE*SRTGRS
Trigger: AGATCTTCCTGTCCTAGACAATTCAAGTAAATGTAC...AAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS-3UTR CAA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCATCCTCCTGTCTATGGTaGCAACTTCAGACTTCAAAG +
Preference number: 5 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSSSCLW*QLQTSK
Trigger: CTTTGAAGTCTGAAGTTGCAACCATAGACAGGAGGA...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTTCCTCCTGTCTATGGTaGCAACTTCAGACTTCAAAG +
Preference number: 5 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCSSCLW*QLQTSK
Trigger: CTTTGAAGTCTGAAGTTGCAACCATAGACAGGAGGA...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS CCA 90 bp TCAGCTGGACTATCAAATCTTTCACTAGTCAGTTGTTGGATGCATTaGTTTGACTCTGCTATCAATGATGGCATTCCTTCATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SAGLSNLSLVSCWMH*FDSAINDGIPSFSL
Trigger: AAGAGAAAATGAAGGAATGCCATCATTGATAGCAGAGTCAAACCAATGCATCCAACAACTGACTAGTGAAAGATTTGATAGTCCAGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000417477.2
ENST00000431317.6
CDS CCA 90 bp CAACTCTTAAAGGACCCTTTACTTGGTCATCTTGTACCAATTGTGTaGTATTATCCTGTTTCAGGAGTACCTTCATTTTTGTTGGTGATC +
Preference number: 5 (lower is better)
Translates to: QLLKDPLLGHLVPIV*YYPVSGVPSFLLVI
Trigger: GATCACCAACAAAAATGAAGGTACTCCTGAAACAGGATAATACCACACAATTGGTACAAGATGACCAAGTAAAGGGTCCTTTAAGAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445108.5
CDS-3UTR CAA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCACTCTGTTCGTCTTCTTaGCAATTACTGGAGTTCCAA +
Preference number: 5 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSLCSSS*QLLEFQ
Trigger: TTGGAACTCCAGTAATTGCAAAGAAGACGAACAGAG...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGCCTAGTAATTCATCATaGAGACGGCGCTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLPSNSS*RRRLSS
Trigger: TGAAGACAAGCGCCGTCTCAATGATGAATTACTAGG...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTAAAACAGGTGGTTTGTaGATTGGAGTACCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCKTGGL*IGVPLS
Trigger: AGACAGAGGTACTCCAATCAACAAACCACCTGTTTT...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAAAAACAGGTGGTTTGTaGATTGGAGTACCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSKTGGL*IGVPLS
Trigger: AGACAGAGGTACTCCAATCAACAAACCACCTGTTTT...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACAAGGTCCATATAAATTaGCTTCCATACAGCACCACT +
Preference number: 5 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNKVHIN*LPYSTT
Trigger: AGTGGTGCTGTATGGAAGCAAATTTATATGGACCTT...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCCCTTCAGAGTCACATTaGCTTTCAGTTTCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISPSESH*LSVSSL
Trigger: GAGGGAAGAAACTGAAAGCAAATGTGACTCTGAAGG...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTTGTTTGATGAGAGGGTaGATTTTAAAGGAGGTCGTC +
Preference number: 5 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCCLMRG*ILKEVV
Trigger: GACGACCTCCTTTAAAATCAACCCTCTCATCAAACA...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCATGTTTGATGAGAGGGTaGATTTTAAAGGAGGTCGTC +
Preference number: 5 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSCLMRG*ILKEVV
Trigger: GACGACCTCCTTTAAAATCAACCCTCTCATCAAACA...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTGTCTTCCCTTTCCTTTaGGAGATTTTTCGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCVFPFL*EIFRLL
Trigger: AAGAAGCCGAAAAATCTCCAAAAGGAAAGGGAAGAC...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGAAAGATCTTTTGTCTaGCTTCGTCTTCCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSERSFV*LRLPFP
Trigger: AGGAAAGGGAAGACGAAGCAAGACAAAAGATCTTTC...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGTTGGATGCATTGGTTaGACTCTGCTATCAATGATG +
Preference number: 5 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSVGCIG*TLLSMM
Trigger: CATCATTGATAGCAGAGTCAAACCAATGCATCCAAC...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTTTCACTATCACTGCTTaGTCCTGTTCCATTCTTTTC +
Preference number: 5 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFFTITA*SCSILF
Trigger: GAAAAGAATGGAACAGGACAAAGCAGTGATAGTGAA...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355431.8
ENST00000395168.7
CDS-3UTR CAA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCACTGGGGTACATTTACTaGAATTGTCTAGGACAGGAA +
Preference number: 5 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSLGYIY*NCLGQE
Trigger: TTCCTGTCCTAGACAATTCAAGTAAATGTACCCCAG...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS-3UTR CAA 90 bp ATGCCCATTTATAGTTCTATACTGTTTGATGGACTGAGACAGACTCCCTTTAACATCATGTGCACTTGCTaGTCTACGATTTCTGTAACA +
Preference number: 5 (lower is better)
Translates to: MPIYSSILFDGLRQTPFNIMCTC*STISVT
Trigger: TGTTACAGAAATCGTAGACAAGCAAGTGCACATGAT...GTTAAAGGGAGTCTGTCTCAGTCCATCAAACAGTATAGAACTATAAATGGGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGCCAAATAACAAGCTGTaGAGCAGACTCGCTTCTACA +
Preference number: 5 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLPNNKL*SRLAST
Trigger: TGTAGAAGCGAGTCTGCTCAACAGCTTGTTATTTGG...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348476.7
CDS TCA 90 bp TCAATCGTTATATCACTCTCACTTTTTACGCTTCGAGACTCATCTTaGCTAAGAGTAAGTGGTGAAGCTACTGAAAAGTTATGTTGGACT +
Preference number: 5 (lower is better)
Translates to: SIVISLSLFTLRDSS*LRVSGEATEKLCWT
Trigger: AGTCCAACATAACTTTTCAGTAGCTTCACCACTTACTCTTAGTCAAGATGAGTCTCGAAGCGTAAAAAGTGAGAGTGATATAACGATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000417477.2
ENST00000431317.6
CDS GCA 90 bp TATGTGTTGGGCATAGAACAAGTCAGACGTTTCCTCCTTTTATGGTaGTTAATTCTTAACTTTCACCAGCCTTTTCACAGTCTTAATCTT +
Preference number: 5 (lower is better)
Translates to: YVLGIEQVRRFLLLW*LILNFHQPFHSLNL
Trigger: AAGATTAAGACTGTGAAAAGGCTGGTGAAAGTTAAGAATTAAGCACCATAAAAGGAGGAAACGTCTGACTTGTTCTATGCCCAACACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR CAA 90 bp ACTAGCATCTGTCAACTTGCTGATAATAGCTTCCTGAAAAGATCCATCAGATGTGTCATCTTGTACCAATaGTGTGGTATTATCCTGTTT +
Preference number: 5 (lower is better)
Translates to: TSICQLADNSFLKRSIRCVILYQ*CGIILF
Trigger: AAACAGGATAATACCACACAATTGGTACAAGATGAC...ACATCTGATGGATCTTTTCAGGAAGCTATTATCAGCAAGTTGACAGATGCTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS-3UTR CAA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTTCAGATTCCGGTAGATaGAGAATGTCTACTTCCTTA +
Preference number: 5 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCSDSGR*RMSTSL
Trigger: TAAGGAAGTAGACATTCTCAATCTACCGGAATCTGA...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTTTTCCTCTTTTACTTTaGGTTCATGGTGATGAACAG +
Preference number: 5 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFFPLLL*VHGDEQ
Trigger: CTGTTCATCACCATGAACCAAAAGTAAAAGAGGAAA...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTTCTTCATCTGAGTCTTaGTCAGAATCCTCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCSSSES*SESSCF
Trigger: AAAACAGGAGGATTCTGACAAAGACTCAGATGAAGA...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCGTCTTCCCTTTCCTTTaGGAGATTTTTCGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISVFPFL*EIFRLL
Trigger: AAGAAGCCGAAAAATCTCCAAAAGGAAAGGGAAGAC...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCGAAAGATCTTTTGTCTaGCTTCGTCTTCCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISERSFV*LRLPFP
Trigger: AGGAAAGGGAAGACGAAGCAAGACAAAAGATCTTTC...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCACTAAAGAAAGATCTTTaGTCTTGCTTCGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSLKKDL*SCFVFP
Trigger: AGGGAAGACGAAGCAAGACAAAAGATCTTTCTTTAG...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCAGGGTTTATCACTGGTCCTTTCTaGAGATACAGTATTTGTCAT +
Preference number: 5 (lower is better)
Translates to: YLAMSNQLSAFCGCNSGFITGPF*RYSICH
Trigger: ATGACAAATACTGTATCTCAAGAAAGGACCAGTGAT...AAACCCTGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp TTAAGAAACAATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACGTTGGATGCATTGGTTaGACTCTGCTATCAATGATG +
Preference number: 5 (lower is better)
Translates to: LRNNDFSNAMPSLVFSSDVGCIG*TLLSMM
Trigger: CATCATTGATAGCAGAGTCAAACCAATGCATCCAAC...GTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATTGTTTCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTTCTGCTCTCTCTCTCTaGTACAATTATACTACAGGT +
Preference number: 5 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCSALSL*YNYTTG
Trigger: ACCTGTAGTATAATTGTACAAGAGAGAGAGAGCAGA...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGATATACTTAGCAATGTCAAACCAGTTGAGTGCTTTCTGTGGTTGTAATTCATTCACTATCACTGCTTaGTCCTGTTCCATTCTTTTC +
Preference number: 5 (lower is better)
Translates to: RIYLAMSNQLSAFCGCNSFTITA*SCSILF
Trigger: GAAAAGAATGGAACAGGACAAAGCAGTGATAGTGAA...TGAATTACAACCACAGAAAGCACTCAACTGGTTTGACATTGCTAAGTATATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355431.8
ENST00000395168.7
CDS-3UTR CAA 90 bp CAGTCTGTGGAACAATTCACAGACAAAGCATACATAGTTGCTTTACTTAGTTGTGTTTATCATGTGCACTaGCTTGTCTACGATTTCTGT +
Preference number: 5 (lower is better)
Translates to: QSVEQFTDKAYIVALLSCVYHVH*LVYDFC
Trigger: ACAGAAATCGTAGACAAGCAAGTGCACATGATAAAC...ACAACTAAGTAAAGCAACTATGTATGCTTTGTCTGTGAATTGTTCCACAGACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGTTTTTAAGAAGATGCTaGCTTTCTGAAGCCCTGGTT +
Preference number: 5 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLFLRRC*LSEALV
Trigger: AACCAGGGCTTCAGAAAGCAAGCATCTTCTTAAAAA...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGTCTTCATCTGAGTCTTaGTCAGAATCCTCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLSSSES*SESSCF
Trigger: AAAACAGGAGGATTCTGACAAAGACTCAGATGAAGA...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGTATTTTACTTTCACTTaGGTTCCTGTTAGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLYFTFT*VPVRQG
Trigger: ACCCTGCCTAACAGGAACCAAAGTGAAAGTAAAATA...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCTATTTTACTTTCACTTaGGTTCCTGTTAGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISYFTFT*VPVRQG
Trigger: ACCCTGCCTAACAGGAACCAAAGTGAAAGTAAAATA...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCCTAAAGAAAGATCTTTaGTCTTGCTTCGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISLKKDL*SCFVFP
Trigger: AGGGAAGACGAAGCAAGACAAAAGATCTTTCTTTAG...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGTCTGCTCTCTCTCTCTaGTACAATTATACTACAGGT +
Preference number: 5 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLSALSL*YNYTTG
Trigger: ACCTGTAGTATAATTGTACAAGAGAGAGAGAGCAGA...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGGTCATCTTGTACCAATaGTGTGGTATTATCCTGTTT +
Preference number: 5 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLVILYQ*CGIILF
Trigger: AAACAGGATAATACCACACAATTGGTACAAGATGAC...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCATCACTGGTCCTTTCTaGAGATACAGTATTTGTCAT +
Preference number: 5 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISITGPF*RYSICH
Trigger: ATGACAAATACTGTATCTCAAGAAAGGACCAGTGAT...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS-3UTR CAA 90 bp AATGATTTCAGTAATGCTATGCCATCACTAGTGTTTAGCTCTGACTTTTTCTTGATCACTGGTCCTTTCTaGAGATACAGTATTTGTCAT +
Preference number: 5 (lower is better)
Translates to: NDFSNAMPSLVFSSDFFLITGPF*RYSICH
Trigger: ATGACAAATACTGTATCTCAAGAAAGGACCAGTGAT...CAAGAAAAAGTCAGAGCTAAACACTAGTGATGGCATAGCATTACTGAAATCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS-3UTR CAA 90 bp AGGAAAAATTATGACAAATATGGCAGGCTGCTTAACCTTCACTTATTAATCAGCTTTGCTAAGTGCCCTTaGTTCTATATCACAACAAAC +
Preference number: 5 (lower is better)
Translates to: RKNYDKYGRLLNLHLLISFAKCP*FYITTN
Trigger: GTTTGTTGTGATATAGAACAAAGGGCACTTAGCAAA...GCTGATTAATAAGTGAAGGTTAAGCAGCCTGCCATATTTGTCATAATTTTTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000431317.6
CDS GCA 72 bp CCGCGCCCCCGCCTCGCTGGCCACTTTGACCCGGAATaGTCAACTCGGAGCTCCAGGACAGATAGCTCCGGA +
Preference number: 6 (lower is better)
Translates to: PRPRLAGHFDPE*STRSSRTDSSG
Trigger: TCCGGAGCTATCTGTCCTGGAGCTCCGAGTTGAGCATTCCGGGTCAAAGTGGCCAGCGAGGCGGGGGCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424658.5
CDS GCA 72 bp CTATCTTCGCAGTCGCTAGAACAACTGCGGGTGAAGTaGGCGCTGTCAGCTCCAGAGTCCTCCTCCCCTCTG +
Preference number: 6 (lower is better)
Translates to: LSSQSLEQLRVK*ALSAPESSSPL
Trigger: CAGAGGGGAGGAGGACTCTGGAGCTGACAGCGCGCACTTCACCCGCAGTTGTTCTAGCGACTGCGAAGATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431612.5
ENST00000445108.5
CDS TCA 72 bp TCTTTGCCTCACAGAAGGCACCTCGGTACTTGGCACTaGCATCGGTTCCCACTGTCAGGTAGGCAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: SLPHRRHLGTWH*HRFPLSGRQAH
Trigger: ATGAGCCTGCCTACCTGACAGTGGGAACCGATGTCAGTGCCAAGTACCGAGGTGCCTTCTGTGAGGCAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000424658.5
ENST00000431317.6
ENST00000431612.5
CDS GCA 72 bp GTTCCTGCGCCGGGTTCCCCACTCGCCCCGATTTACTaGCACAATCCACCAAATAACAAGCTGTTGAGCAGA +
Preference number: 6 (lower is better)
Translates to: VPAPGSPLAPIY*HNPPNNKLLSR
Trigger: TCTGCTCAACAGCTTGTTATTTGGTGGATTGTGGCAGTAAATCGGGGCGAGTGGGGAACCCGGCGCAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348476.7
CDS CCA 72 bp GGCTCATCTGCCGCCTTCATTTTTGTTGGTGATCTGTaGGGTTCCAGCTCAGCGAGCTATCTTCGCAGTCGC +
Preference number: 6 (lower is better)
Translates to: GSSAAFIFVGDL*GSSSASYLRSR
Trigger: GCGACTGCGAAGATAGCTCGCTGAGCTGGAACCCCACAGATCACCAACAAAAATGAAGGCGGCAGATGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000424658.5
ENST00000431317.6
ENST00000431612.5
CDS TCA 72 bp GTAGGCAGGCTCATCTGCCGCCTTCATTTTTGTTGGTaGTCTGTGGGGTTCCAGCTCAGCGAGCTATCTTCG +
Preference number: 6 (lower is better)
Translates to: VGRLICRLHFCW*SVGFQLSELSS
Trigger: CGAAGATAGCTCGCTGAGCTGGAACCCCACAGATCACCAACAAAAATGAAGGCGGCAGATGAGCCTGCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000424658.5
ENST00000431317.6
ENST00000431612.5
CDS CCA 72 bp CTTCCCTGCTGTCAACTGCAGGACCTTTCTTTTGACTaGGTGGCGCAGCCTTCTTTGAGGCCACTGTTTAGG +
Preference number: 6 (lower is better)
Translates to: LPCCQLQDLSFD*VAQPSLRPLFR
Trigger: CCTAAACAGTGGCCTCAAAGAAGGCTGCGCCACCCAGTCAAAAGAAAGGTCCTGCAGTTGACAGCAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553355.1
CDS CCA 72 bp CAGCTCAGCGAGCTATCTTCGCAGTCGCTAGAACTATaGGGAGGGGGAAAGACAGGCACAGACATAATCAGT +
Preference number: 6 (lower is better)
Translates to: QLSELSSQSLEL*GGGKTGTDIIS
Trigger: ACTGATTATGTCTGTGCCTGTCTTTCCCCCTCCCCATAGTTCTAGCGACTGCGAAGATAGCTCGCTGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431317.6
CDS CAA 90 bp TGTCAACTGCAGGACCTTTCTTTTGACTGGGTGGCGCAGCCTTCTTaGAGGCCACTGTTTAGGGCACAAGTGCTATTAAAATGGTGCGAC +
Preference number: 6 (lower is better)
Translates to: CQLQDLSFDWVAQPS*RPLFRAQVLLKWCD
Trigger: GTCGCACCATTTTAATAGCACTTGTGCCCTAAACAGTGGCCTCAAAGAAGGCTGCGCCACCCAGTCAAAAGAAAGGTCCTGCAGTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553355.1
CDS TCA 72 bp ATTATCCTGTTTCAGGAGTACCTTCATTTTTGTTGGTaGTCTGTGGGGTTCCAGCTCAGCGAGCTATCTTCG +
Preference number: 6 (lower is better)
Translates to: IILFQEYLHFCW*SVGFQLSELSS
Trigger: CGAAGATAGCTCGCTGAGCTGGAACCCCACAGATCACCAACAAAAATGAAGGTACTCCTGAAACAGGATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445108.5
CDS CAA 72 bp TGGCCTCTTCTGACCCTTCTCTCTGCTCTCTCTCTCTaGTACAATTATACTACAGGTACCAGAGGCAACATT +
Preference number: 6 (lower is better)
Translates to: WPLLTLLSALSL*YNYTTGTRGNI
Trigger: AATGTTGCCTCTGGTACCTGTAGTATAATTGTACAAGAGAGAGAGAGCAGAGAGAAGGGTCAGAAGAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS CAA 72 bp AGGGTCTGGACATTTTTCAGTCTGACTTGCAAATATTaGCTTTCCCTCTTAGGGCATAGCATCCGCAGGGTT +
Preference number: 6 (lower is better)
Translates to: RVWTFFSLTCKY*LSLLGHSIRRV
Trigger: AACCCTGCGGATGCTATGCCCTAAGAGGGAAAGCAAATATTTGCAAGTCAGACTGAAAAATGTCCAGACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417477.2
CDS CAA 90 bp AATCAGTACAGGGTCTGGACATTTTTCAGTCTGACTTGCAAATATTaGCTTTCCCTCTTAGGGCATAGCATCCGCAGGGTTATACAGCAC +
Preference number: 6 (lower is better)
Translates to: NQYRVWTFFSLTCKY*LSLLGHSIRRVIQH
Trigger: GTGCTGTATAACCCTGCGGATGCTATGCCCTAAGAGGGAAAGCAAATATTTGCAAGTCAGACTGAAAAATGTCCAGACCCTGTACTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417477.2
CDS GCA 72 bp TTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTaGTGGGAAGGTAGAGAAAATGTTTATCACCTGCAT +
Preference number: 6 (lower is better)
Translates to: FRVWGFMSMAAN*WEGRENVYHLH
Trigger: ATGCAGGTGATAAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS CCA 72 bp AGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTaGGAAGGTAGAGAAAATGTTTATCACCTGCATTCT +
Preference number: 6 (lower is better)
Translates to: RVWGFMSMAANC*EGRENVYHLHS
Trigger: AGAATGCAGGTGATAAACATTTTCTCTACCTTCCCAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS CAA 72 bp AGCCCTGGTTTAGTGGAGAGCTCAGATTCCGGTAGATaGAGAATGTCTACTTCCTTAATGTCCTTTCTTGCT +
Preference number: 6 (lower is better)
Translates to: SPGLVESSDSGR*RMSTSLMSFLA
Trigger: AGCAAGAAAGGACATTAAGGAAGTAGACATTCTCAATCTACCGGAATCTGAGCTCTCCACTAAACCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
ENST00000445108.5
CDS CAA 90 bp TCCATCACTTGGCCTCTTCTGACCCTTCTCTCTGCTCTCTCTCTCTaGTACAATTATACTACAGGTACCAGAGGCAACATTAGTTTCAAA +
Preference number: 6 (lower is better)
Translates to: SITWPLLTLLSALSL*YNYTTGTRGNISFK
Trigger: TTTGAAACTAATGTTGCCTCTGGTACCTGTAGTATAATTGTACAAGAGAGAGAGAGCAGAGAGAAGGGTCAGAAGAGGCCAAGTGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS CAA 90 bp AAACATTCCCTCAAACCTGAATCTCTAAGCAGGAACAAAGCGCTGTaGTACCCCAGACAGGTGCTTCTGGAGAACAAACATAAGATAATG +
Preference number: 6 (lower is better)
Translates to: KHSLKPESLSRNKAL*YPRQVLLENKHKIM
Trigger: CATTATCTTATGTTTGTTCTCCAGAAGCACCTGTCTGGGGTACAACAGCGCTTTGTTCCTGCTTAGAGATTCAGGTTTGAGGGAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553355.1
CDS TCA 72 bp ACACCACACTTACAACTTTTCCTAGTAATTCATCATTaGGACGGCGCTTGTCTTCATCTTCCTCTTCACTGC +
Preference number: 6 (lower is better)
Translates to: TPHLQLFLVIHH*DGACLHLPLHC
Trigger: GCAGTGAAGAGGAAGATGAAGACAAGCGCCGTCTCAATGATGAATTACTAGGAAAAGTTGTAAGTGTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
ENST00000445108.5
CDS GCA 72 bp TATTTCCATCACTTGGCCTCTTCTGACCCTTCTCTCTaGTCTCTCTCTCTTGTACAATTATACTACAGGTAC +
Preference number: 6 (lower is better)
Translates to: YFHHLASSDPSL*SLSLVQLYYRY
Trigger: GTACCTGTAGTATAATTGTACAAGAGAGAGAGAGCAGAGAGAAGGGTCAGAAGAGGCCAAGTGATGGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
CDS GCA 72 bp AGGCCACTGTTTAGGGCACAAGTGCTATTAAAATGGTaGGACCAGTATATTCTCCAATTCCGAAAGGCAATA +
Preference number: 6 (lower is better)
Translates to: RPLFRAQVLLKW*DQYILQFRKAI
Trigger: TATTGCCTTTCGGAATTGGAGAATATACTGGTCGCACCATTTTAATAGCACTTGTGCCCTAAACAGTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553355.1
CDS CCA 72 bp CTAAGAGTAAGTGGTGAAGCTACTGAAAAGTTATGTTaGACTACAGGAGGTAGGGCAGGTGGAATAGAAACA +
Preference number: 6 (lower is better)
Translates to: LRVSGEATEKLC*TTGGRAGGIET
Trigger: TGTTTCTATTCCACCTGCCCTACCTCCTGTAGTCCAACATAACTTTTCAGTAGCTTCACCACTTACTCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000417477.2
ENST00000431317.6
CDS CAA 72 bp GACACCACACTTACAACTTTTCCTAGTAATTCATCATaGAGACGGCGCTTGTCTTCATCTTCCTCTTCACTG +
Preference number: 6 (lower is better)
Translates to: DTTLTTFPSNSS*RRRLSSSSSSL
Trigger: CAGTGAAGAGGAAGATGAAGACAAGCGCCGTCTCAATGATGAATTACTAGGAAAAGTTGTAAGTGTGGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
ENST00000445108.5
CDS TCA 72 bp CCTCTTTTACTTTTGGTTCATGGTGATGAACAGTTCTaGACTGAATATTTGCCGAACGGCAGTACTCCTCAA +
Preference number: 6 (lower is better)
Translates to: PLLLLVHGDEQF*TEYLPNGSTPQ
Trigger: TTGAGGAGTACTGCCGTTCGGCAAATATTCAGTTCAGAACTGTTCATCACCATGAACCAAAAGTAAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000417477.2
ENST00000431317.6
CDS GCA 72 bp ATCTTTGATGTGCGGGGATATTCTTGCAGGAGATCGTaGAAGTTTCTGTGGCTTAGATACATTAAGATGCTT +
Preference number: 6 (lower is better)
Translates to: IFDVRGYSCRRS*KFLWLRYIKML
Trigger: AAGCATCTTAATGTATCTAAGCCACAGAAACTTGCACGATCTCCTGCAAGAATATCCCCGCACATCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS CCA 72 bp TTATCCTTTTCATCCAAATCATCCAAATCTACTTCATaGCAAACCAAGGTTTCAGGCCCGATCAGAGGCATT +
Preference number: 6 (lower is better)
Translates to: LSFSSKSSKSTS*QTKVSGPIRGI
Trigger: AATGCCTCTGATCGGGCCTGAAACCTTGGTTTGCCATGAAGTAGATTTGGATGATTTGGATGAAAAGGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000417477.2
ENST00000431317.6
CDS CCA 72 bp TTGGGCATAGAACAAGTCAGACGTTTCCTCCTTTTATaGTGCTTAATTCTTAACTTTCACCAGCCTTTTCAC +
Preference number: 6 (lower is better)
Translates to: LGIEQVRRFLLL*CLILNFHQPFH
Trigger: GTGAAAAGGCTGGTGAAAGTTAAGAATTAAGCACCATAAAAGGAGGAAACGTCTGACTTGTTCTATGCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431612.5
CDS CAA 72 bp ATATTACCAAAGCAGGATACCATTCAGTCCTCTCCGTaGCAGACACCACACTTACAACTTTTCCTAGTAATT +
Preference number: 6 (lower is better)
Translates to: ILPKQDTIQSSP*QTPHLQLFLVI
Trigger: AATTACTAGGAAAAGTTGTAAGTGTGGTGTCTGCAACGGAGAGGACTGAATGGTATCCTGCTTTGGTAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000431317.6
ENST00000445108.5
CDS CAA 72 bp AAATCCATTTGCCGATTCCCTCTCACAGAGACCTTCTaGAGATTCTTCAGCAATACTATCAACTTCAATCGT +
Preference number: 6 (lower is better)
Translates to: KSICRFPLTETF*RFFSNTINFNR
Trigger: ACGATTGAAGTTGATAGTATTGCTGAAGAATCTCAAGAAGGTCTCTGTGAGAGGGAATCGGCAAATGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000417477.2
ENST00000431317.6
CDS CAA 90 bp GGCTTAGATACATTAAGATGCTTTACTGGGGTACATTTACTTGAATaGTCTAGGACAGGAAGATCTTCACTATCACTGCTTTGTCCTGTT +
Preference number: 6 (lower is better)
Translates to: GLDTLRCFTGVHLLE*SRTGRSSLSLLCPV
Trigger: AACAGGACAAAGCAGTGATAGTGAAGATCTTCCTGTCCTAGACAATTCAAGTAAATGTACCCCAGTAAAGCATCTTAATGTATCTAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS GCA 72 bp AATAGAAACAAGAGAGTTAGACTCAGAGCTTTCAACTaGTACATCCTCAATGCTGGTCTTATCCTTTTCATC +
Preference number: 6 (lower is better)
Translates to: NRNKRVRLRAFN*YILNAGLILFI
Trigger: GATGAAAAGGATAAGACCAGCATTGAGGATGTAGCAGTTGAAAGCTCTGAGTCTAACTCTCTTGTTTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000417477.2
ENST00000431317.6
CDS TCA 72 bp ATATCACTCTCACTTTTTACGCTTCGAGACTCATCTTaGCTAAGAGTAAGTGGTGAAGCTACTGAAAAGTTA +
Preference number: 6 (lower is better)
Translates to: ISLSLFTLRDSS*LRVSGEATEKL
Trigger: TAACTTTTCAGTAGCTTCACCACTTACTCTTAGTCAAGATGAGTCTCGAAGCGTAAAAAGTGAGAGTGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000417477.2
ENST00000431317.6
CDS TCA 72 bp ATTGAGCTGAAAGCTCCATTTATATGTCCTAGGGGATaGATTCGGATGTTTTTCTCTGTGTTTATCTTTCTC +
Preference number: 6 (lower is better)
Translates to: IELKAPFICPRG*IRMFFSVFIFL
Trigger: GAGAAAGATAAACACAGAGAAAAACATCCGAATTCATCCCCTAGGACATATAAATGGAGCTTTCAGCTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355431.8
CDS CCA 72 bp TTTGAAGAGATTGAGATCTTTATAGCCCAAAACAGGTaGTTTGTTGATTGGAGTACCTCTGTCTTCCATAAA +
Preference number: 6 (lower is better)
Translates to: FEEIEIFIAQNR*FVDWSTSVFHK
Trigger: TTTATGGAAGACAGAGGTACTCCAATCAACAAACCACCTGTTTTGGGCTATAAAGATCTCAATCTCTTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348476.7
ENST00000355431.8
ENST00000395168.7
ENST00000417477.2
ENST00000431317.6