Pregenerated sensors for ARID3C (Homo sapiens)
Ensembl gene IDs: ENSG00000205143Ensembl transcript IDs: ENST00000378909.3
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCGGGACCCAAGGCTGGGTCCTGAGCGCCCCGAGGGGGCGGCCCTaGCAAGCCGAAGAGCGGAGTAGCGGTGTAAGCCTGGCGACGGCC | + |
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Preference number: 5 (lower is better) Translates to: AGTQGWVLSAPRGRP*QAEERSSGVSLATA Trigger: GGCCGTCGCCAGGCTTACACCGCTACTCCGCTCTTCGGCTTGGCAGGGCCGCCCCCTCGGGGCGCTCAGGACCCAGCCTTGGGTCCCGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS CCA 90 bp | CCCTGTGGAGGGTGGGGGTGCAGGGTTGGTTGGACCCTGGGAAGCTaGCACAGGCTGGCGGCGGGCAAAGAGGACACCAGTGTAGACCAC | + |
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Preference number: 5 (lower is better) Translates to: PCGGWGCRVGWTLGS*HRLAAGKEDTSVDH Trigger: GTGGTCTACACTGGTGTCCTCTTTGCCCGCCGCCAGCCTGTGCCAGCTTCCCAGGGTCCAACCAACCCTGCACCCCCACCCTCCACAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS GCA 90 bp | TCCACTCTCCTCTTTCTTAATAGGGCTTGGACTCAGCTGAGCGCATaGATGCGCTGGCAGGCCGGAGGTGGAACCCTGGGCTGGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: STLLFLNRAWTQLSA*MRWQAGGGTLGWAR Trigger: CCTGGCCCAGCCCAGGGTTCCACCTCCGGCCTGCCAGCGCATGCATGCGCTCAGCTGAGTCCAAGCCCTATTAAGAAAGAGGAGAGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS GCA 90 bp | CATAGGCCCCATCAGCACAGCTCTCTTCTCTGGGGGCTCCTCTGGTaGCAATTTCTCCCGTGTAGGTCCCAGTGCCAGGCCCACAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: HRPHQHSSLLWGLLW*QFLPCRSQCQAHRQ Trigger: CTGCCTGTGGGCCTGGCACTGGGACCTACACGGGAGAAATTGGCACCAGAGGAGCCCCCAGAGAAGAGAGCTGTGCTGATGGGGCCTATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS CCA 90 bp | GTCCATAGGCCCCATCAGCACAGCTCTCTTCTCTGGGGGCTCCTCTaGTGCCAATTTCTCCCGTGTAGGTCCCAGTGCCAGGCCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VHRPHQHSSLLWGLL*CQFLPCRSQCQAHR Trigger: CCTGTGGGCCTGGCACTGGGACCTACACGGGAGAAATTGGCACCAGAGGAGCCCCCAGAGAAGAGAGCTGTGCTGATGGGGCCTATGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS GCA 90 bp | CTCTGGGGGCTCCTCTGGTGCCAATTTCTCCCGTGTAGGTCCCAGTaGCAGGCCCACAGGCAGTGCCAGACAAGGGTTTGGAATTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LWGLLWCQFLPCRSQ*QAHRQCQTRVWNST Trigger: AGTGGAATTCCAAACCCTTGTCTGGCACTGCCTGTGGGCCTGGCACTGGGACCTACACGGGAGAAATTGGCACCAGAGGAGCCCCCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS TCA 90 bp | TTTGGAATTCCACTCTCCTCTTTCTTAATAGGGCTTGGACTCAGCTaGGCGCATGCATGCGCTGGCAGGCCGGAGGTGGAACCCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: FGIPLSSFLIGLGLS*AHACAGRPEVEPWA Trigger: AGCCCAGGGTTCCACCTCCGGCCTGCCAGCGCATGCATGCGCTCAGCTGAGTCCAAGCCCTATTAAGAAAGAGGAGAGTGGAATTCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS GCA 90 bp | TGCCAATTTCTCCCGTGTAGGTCCCAGTGCCAGGCCCACAGGCAGTaGCAGACAAGGGTTTGGAATTCCACTCTCCTCTTTCTTAATAGG | + |
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Preference number: 5 (lower is better) Translates to: CQFLPCRSQCQAHRQ*QTRVWNSTLLFLNR Trigger: CCTATTAAGAAAGAGGAGAGTGGAATTCCAAACCCTTGTCTGGCACTGCCTGTGGGCCTGGCACTGGGACCTACACGGGAGAAATTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS GCA 72 bp | CAAGGCTGGGTCCTGAGCGCCCCGAGGGGGCGGCCCTaGCAAGCCGAAGAGCGGAGTAGCGGTGTAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: QGWVLSAPRGRP*QAEERSSGVSL Trigger: CAGGCTTACACCGCTACTCCGCTCTTCGGCTTGGCAGGGCCGCCCCCTCGGGGCGCTCAGGACCCAGCCTTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS CCA 72 bp | GGGTGGGGGTGCAGGGTTGGTTGGACCCTGGGAAGCTaGCACAGGCTGGCGGCGGGCAAAGAGGACACCAGT | + |
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Preference number: 6 (lower is better) Translates to: GWGCRVGWTLGS*HRLAAGKEDTS Trigger: ACTGGTGTCCTCTTTGCCCGCCGCCAGCCTGTGCCAGCTTCCCAGGGTCCAACCAACCCTGCACCCCCACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS CCA 72 bp | AATAGGGCTTGGACTCAGCTGAGCGCATGCATGCGCTaGCAGGCCGGAGGTGGAACCCTGGGCTGGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: NRAWTQLSACMR*QAGGGTLGWAR Trigger: CCTGGCCCAGCCCAGGGTTCCACCTCCGGCCTGCCAGCGCATGCATGCGCTCAGCTGAGTCCAAGCCCTATT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS GCA 72 bp | CTCTTTCTTAATAGGGCTTGGACTCAGCTGAGCGCATaGATGCGCTGGCAGGCCGGAGGTGGAACCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LFLNRAWTQLSA*MRWQAGGGTLG Trigger: GCCCAGGGTTCCACCTCCGGCCTGCCAGCGCATGCATGCGCTCAGCTGAGTCCAAGCCCTATTAAGAAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS GCA 72 bp | CATCAGCACAGCTCTCTTCTCTGGGGGCTCCTCTGGTaGCAATTTCTCCCGTGTAGGTCCCAGTGCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: HQHSSLLWGLLW*QFLPCRSQCQA Trigger: GGCCTGGCACTGGGACCTACACGGGAGAAATTGGCACCAGAGGAGCCCCCAGAGAAGAGAGCTGTGCTGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS CCA 72 bp | CCCCATCAGCACAGCTCTCTTCTCTGGGGGCTCCTCTaGTGCCAATTTCTCCCGTGTAGGTCCCAGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PHQHSSLLWGLL*CQFLPCRSQCQ Trigger: CTGGCACTGGGACCTACACGGGAGAAATTGGCACCAGAGGAGCCCCCAGAGAAGAGAGCTGTGCTGATGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS TCA 72 bp | GAAACAGAGCGTACAGGTCGAGCACCTGCTTCGCCATaGTGGGCACGCGGTTCACTGGCGTCCCCCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: ETERTGRAPASP*WARGSLASPSF Trigger: AAAAGAGGGGGACGCCAGTGAACCGCGTGCCCATCATGGCGAAGCAGGTGCTCGACCTGTACGCTCTGTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS TCA 72 bp | CCACTCTCCTCTTTCTTAATAGGGCTTGGACTCAGCTaGGCGCATGCATGCGCTGGCAGGCCGGAGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: PLSSFLIGLGLS*AHACAGRPEVE Trigger: TTCCACCTCCGGCCTGCCAGCGCATGCATGCGCTCAGCTGAGTCCAAGCCCTATTAAGAAAGAGGAGAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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| CDS CCA 72 bp | GTTTGGAATTCCACTCTCCTCTTTCTTAATAGGGCTTaGACTCAGCTGAGCGCATGCATGCGCTGGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VWNSTLLFLNRA*TQLSACMRWQA Trigger: GGCCTGCCAGCGCATGCATGCGCTCAGCTGAGTCCAAGCCCTATTAAGAAAGAGGAGAGTGGAATTCCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378909.3 |
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