RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARID3A (Homo sapiens)

Ensembl gene IDs: ENSG00000116017

Ensembl transcript IDs: ENST00000263620.8, ENST00000457152.3, ENST00000585733.2, ENST00000585895.1, ENST00000587532.5, ENST00000590749.2, ENST00000592216.2

Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCGCGGCTCTAGCCCCAGGGATCCGATGTGCTGGGCTCACAGCTaGCCAACGCACCCCCAGAAATGGACAAAGGGACCCAAATTGGTC +
Preference number: 1 (lower is better)
Translates to: LRGSSPRDPMCWAHS*PTHPQKWTKGPKLV
Trigger: GACCAATTTGGGTCCCTTTGTCCATTTCTGGGGGTGCGTTGGGCAGCTGTGAGCCCAGCACATCGGATCCCTGGGGCTAGAGCCGCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR GCA 90 bp ACACACAGTGCAGGGATGTATGAGGTAAACAGGATCGGCCCACACTaGTGTGGGGCCAAACCAGACACCAGAGCCTTCGGTCCATCAGGG +
Preference number: 1 (lower is better)
Translates to: THSAGMYEVNRIGPH*CGAKPDTRAFGPSG
Trigger: CCCTGATGGACCGAAGGCTCTGGTGTCTGGTTTGGCCCCACAGCAGTGTGGGCCGATCCTGTTTACCTCATACATCCCTGCACTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR TCA 90 bp TGGGGCCAAACCAGACACCAGAGCCTTCGGTCCATCAGGGCTGCCTaGACGCCCTGGGAAACGTCTGCCTCTTTCTGTTTTTCTGATGGA +
Preference number: 1 (lower is better)
Translates to: WGQTRHQSLRSIRAA*TPWETSASFCFSDG
Trigger: TCCATCAGAAAAACAGAAAGAGGCAGACGTTTCCCAGGGCGTTCAGGCAGCCCTGATGGACCGAAGGCTCTGGTGTCTGGTTTGGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATTGCTGGGCTCACAGCTaGCCAACGCACCCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNCWAHS*PTHPQK
Trigger: TTTCTGGGGGTGCGTTGGGCAGCTGTGAGCCCAGCA...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTCCATCAGGGCTGCCTaGACGCCCTGGGAAACGTCT +
Preference number: 2 (lower is better)
Translates to: ILVQGFHWTREAGSGECVSIRAA*TPWETS
Trigger: AGACGTTTCCCAGGGCGTTCAGGCAGCCCTGATGGA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTCGGTCCATCAGGGCTaGCTGAACGCCCTGGGAAAC +
Preference number: 2 (lower is better)
Translates to: ILVQGFHWTREAGSGECVSVHQG*LNALGN
Trigger: GTTTCCCAGGGCGTTCAGGCAGCCCTGATGGACCGA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGAGGATCGGCCCACACTaGTGTGGGGCCAAACCAGAC +
Preference number: 2 (lower is better)
Translates to: ILVQGFHWTREAGSGECVRIGPH*CGAKPD
Trigger: GTCTGGTTTGGCCCCACAGCAGTGTGGGCCGATCCT...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR-3UTR GCA 90 bp ACGAGGCCGCCCTTCTCCGTCACCAGCACGTACAGCATGAACAGGTCAAGGACCGCTCACTGCAACCTCTaGCTCCTGGATTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: TRPPFSVTSTYSMNRSRTAHCNL*LLDSSN
Trigger: ATTGCTTGAATCCAGGAGGCAGAGGTTGCAGTGAGC...GGTCCTTGACCTGTTCATGCTGTACGTGCTGGTGACGGAGAAGGGCGGCCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457152.3
3UTR-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTATCTTCCGCCATCCTaGCCCCTGTGTGGCCCACCT +
Preference number: 2 (lower is better)
Translates to: ILVQGFHWTREAGSGECVYLPPS*PLCGPP
Trigger: AGGTGGGCCACACAGGGGCCAGGATGGCGGAAGATA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR-3UTR CCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGTTCAGGGGTTTCACTaGACACGAGAAGCTGGGAGT +
Preference number: 2 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNVQGFH*TREAGS
Trigger: ACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAAC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR-3UTR GCA 90 bp ACGAGGCCGCCCTTCTCCGTCACCAGCACGTACAGCATGAACAGGTCAAGGACCTTCACAGGTGTCCCATaGCTGCTTTTTGTTTGTTTG +
Preference number: 2 (lower is better)
Translates to: TRPPFSVTSTYSMNRSRTFTGVP*LLFVCL
Trigger: CAAACAAACAAAAAGCAGGCATGGGACACCTGTGAA...GGTCCTTGACCTGTTCATGCTGTACGTGCTGGTGACGGAGAAGGGCGGCCTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457152.3
3UTR-3UTR CCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTAGGGATCCGATGTGCTaGGCTCACAGCTGCCCAACG +
Preference number: 2 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTRDPMC*AHSCPT
Trigger: CGTTGGGCAGCTGTGAGCCCAGCACATCGGATCCCT...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR-3UTR TCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTCAGTGCAGGGATGTATaGGGTAAACAGGATCGGCCC +
Preference number: 2 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTQCRDV*GKQDRP
Trigger: GGGCCGATCCTGTTTACCTCATACATCCCTGCACTG...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTTTTGGCGTCAGCTGTaGCTCCTTTCTGGATATCTT +
Preference number: 2 (lower is better)
Translates to: ILVQGFHWTREAGSGECVFWRQL*LLSGYL
Trigger: AAGATATCCAGAAAGGAGCCACAGCTGACGCCAAAA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR-3UTR TCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATCTCTTTCTGTTTTTCTaGTGGATTTCTTTGCTGTTC +
Preference number: 2 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNLFLFF*WISLLF
Trigger: GAACAGCAAAGAAATCCATCAGAAAAACAGAAAGAG...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTTCTGATGGATTTCTTTaGTGTTCTCACAATTCATCT +
Preference number: 2 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTSDGFL*CSHNSS
Trigger: AGATGAATTGTGAGAACAGCAAAGAAATCCATCAGA...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR TCA 72 bp GCATGCACCCTCTGCCCCAGCCCGGCCCATAGCACCTaGGTTCATTGGCTCCGCGGCTCTAGCCCCAGGGAT +
Preference number: 3 (lower is better)
Translates to: ACTLCPSPAHST*VHWLRGSSPRD
Trigger: ATCCCTGGGGCTAGAGCCGCGGAGCCAATGAACTCAGGTGCTATGGGCCGGGCTGGGGCAGAGGGTGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR CCA 72 bp TGGCTCCGCGGCTCTAGCCCCAGGGATCCGATGTGCTaGGCTCACAGCTGCCCAACGCACCCCCAGAAATGG +
Preference number: 3 (lower is better)
Translates to: WLRGSSPRDPMC*AHSCPTHPQKW
Trigger: CCATTTCTGGGGGTGCGTTGGGCAGCTGTGAGCCCAGCACATCGGATCCCTGGGGCTAGAGCCGCGGAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR GCA 72 bp TCTAGCCCCAGGGATCCGATGTGCTGGGCTCACAGCTaGCCAACGCACCCCCAGAAATGGACAAAGGGACCC +
Preference number: 3 (lower is better)
Translates to: SSPRDPMCWAHS*PTHPQKWTKGP
Trigger: GGGTCCCTTTGTCCATTTCTGGGGGTGCGTTGGGCAGCTGTGAGCCCAGCACATCGGATCCCTGGGGCTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR GCA 72 bp CCAAACCAGACACCAGAGCCTTCGGTCCATCAGGGCTaGCTGAACGCCCTGGGAAACGTCTGCCTCTTTCTG +
Preference number: 3 (lower is better)
Translates to: PNQTPEPSVHQG*LNALGNVCLFL
Trigger: CAGAAAGAGGCAGACGTTTCCCAGGGCGTTCAGGCAGCCCTGATGGACCGAAGGCTCTGGTGTCTGGTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR GCA 72 bp GCAGGGATGTATGAGGTAAACAGGATCGGCCCACACTaGTGTGGGGCCAAACCAGACACCAGAGCCTTCGGT +
Preference number: 3 (lower is better)
Translates to: AGMYEVNRIGPH*CGAKPDTRAFG
Trigger: ACCGAAGGCTCTGGTGTCTGGTTTGGCCCCACAGCAGTGTGGGCCGATCCTGTTTACCTCATACATCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR TCA 72 bp ACCAGACACCAGAGCCTTCGGTCCATCAGGGCTGCCTaGACGCCCTGGGAAACGTCTGCCTCTTTCTGTTTT +
Preference number: 3 (lower is better)
Translates to: TRHQSLRSIRAA*TPWETSASFCF
Trigger: AAAACAGAAAGAGGCAGACGTTTCCCAGGGCGTTCAGGCAGCCCTGATGGACCGAAGGCTCTGGTGTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR-3UTR CAA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATAAAAATTCAGTGATCTaGGTTCAGGGGTTTCACTGG +
Preference number: 3 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNKNSVI*VQGFHW
Trigger: CCAGTGAAACCCCTGAACCAAGATCACTGAATTTTT...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263620.8
3UTR CCA 72 bp AACAAAAATTCAGTGATCTTGGTTCAGGGGTTTCACTaGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: NKNSVILVQGFH*TREAGSGECVV
Trigger: CACCACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGATCACTGAATTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp ACGAGGCCGCCCTTCTCCGTCACCAGCACGTACAGCATGAACAGGTCAAGGACCTCAGGCGGCTGCAGCTaGGGGGCTACGTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TRPPFSVTSTYSMNRSRTSGGCS*GATWAA
Trigger: GGCCGCCCACGTAGCCCCGCAGCTGCAGCCGCCTGA...GGTCCTTGACCTGTTCATGCTGTACGTGCTGGTGACGGAGAAGGGCGGCCTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457152.3
CDS-3UTR CCA 90 bp ACGAGGCCGCCCTTCTCCGTCACCAGCACGTACAGCATGAACAGGTCAAGGACCTCGCCGCGGAAGGCCTaGGGTGGCTGGGCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: TRPPFSVTSTYSMNRSRTSPRKA*GGWAFR
Trigger: CCGAAAGGCCCAGCCACCCCAGGCCTTCCGCGGCGA...GGTCCTTGACCTGTTCATGCTGTACGTGCTGGTGACGGAGAAGGGCGGCCTCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457152.3
CDS-3UTR CCA 90 bp ACGAGGCCGCCCTTCTCCGTCACCAGCACGTACAGCATGAACAGGTCAAGGACCGCGGAAGGCCTGGGGTaGCTGGGCCTTTCGGGGGAA +
Preference number: 4 (lower is better)
Translates to: TRPPFSVTSTYSMNRSRTAEGLG*LGLSGE
Trigger: TTCCCCCGAAAGGCCCAGCCACCCCAGGCCTTCCGC...GGTCCTTGACCTGTTCATGCTGTACGTGCTGGTGACGGAGAAGGGCGGCCTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457152.3
CDS-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTCTGCCTCGCCCGGGTaGGCCCGGTGTCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVSASPG*ARCPLP
Trigger: CGGGAGGGGACACCGGGCTCACCCGGGCGAGGCAGA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCCTTCTCCGTCACCAGCACGTACAGCATGAACAGGTCAAGGACCTGTTTGGCCCCGTGGTCAGGCGGCTaGAGCTGCGGGGCTACGTGG +
Preference number: 4 (lower is better)
Translates to: PFSVTSTYSMNRSRTCLAPWSGG*SCGATW
Trigger: CCACGTAGCCCCGCAGCTGCAGCCGCCTGACCACGG...GGCCAAACAGGTCCTTGACCTGTTCATGCTGTACGTGCTGGTGACGGAGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457152.3
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATTGGCGCGCCCGCTGCTaGCGCTGCAACAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNWRARC*RCNSVS
Trigger: GGAGACGCTGTTGCAGCGGCAGCAGCGGGCGCGCCA...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATTCCCAGGCCCGCAGCTaGAGCCCGCATGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNSQARS*SPHGCQ
Trigger: CTGGCAGCCATGCGGGCTGCAGCTGCGGGCCTGGGA...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTCAGGCGGCTGCAGCTaGGGGGCTACGTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVSGGCS*GATWAA
Trigger: GGCCGCCCACGTAGCCCCGCAGCTGCAGCCGCCTGA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATCCGTGGTCAGGCGGCTaGAGCTGCGGGGCTACGTGG +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNPWSGG*SCGATW
Trigger: CCACGTAGCCCCGCAGCTGCAGCCGCCTGACCACGG...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCCCAGCCCTCGACCCTaGACGGCCCCTCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVPSPRP*TAPPQA
Trigger: AGCCTGGGGAGGGGCCGTGCAGGGTCGAGGGCTGGG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGAGCCACCAAAGCTCTaGCGCCGGCCCTCCCGTCGG +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNEPPKL*RRPSRR
Trigger: CCGACGGGAGGGCCGGCGCCAGAGCTTTGGTGGCTC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGCCAGTGCGGCCATCTaGGCCCGCTGCATCCGGGCA +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVASAAI*ARCIRA
Trigger: TGCCCGGATGCAGCGGGCTCAGATGGCCGCACTGGC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTCCTGGCGCGCCCGCTaGTGCCGCTGCAACAGCGTC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVSWRAR*CRCNSV
Trigger: GACGCTGTTGCAGCGGCAGCAGCGGGCGCGCCAGGA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATCCGCATGGCTGCCAGTaGGGCCATCTGAGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNPHGCQ*GHLSPL
Trigger: CAGCGGGCTCAGATGGCCGCACTGGCAGCCATGCGG...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCTCCTGGCCCTTCTCTaGCTCGCCCGGGTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVLLALL*LARVSP
Trigger: CGGGCTCACCCGGGCGAGGCAGAGAAGGGCCAGGAG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATCGGCCTGTAGTTTCATaGCCCTGCGGCCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNRPVVS*PCGPGH
Trigger: GTGGCCCGGGCCGCAGGGCCATGAAACTACAGGCCG...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTCGCCGCGGAAGGCCTaGGGTGGCTGGGCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVSPRKA*GGWAFR
Trigger: CCGAAAGGCCCAGCCACCCCAGGCCTTCCGCGGCGA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGCTGCCACCACAGGGTaGCCCGCCAGGGACACAGGC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVAATTG*PARDTG
Trigger: GCCTGTGTCCCTGGCGGGCCACCCTGTGGTGGCAGC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCCGCCGGGCTCAAGCTaGAGGCTGATGGGGCATGCC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVPPGSS*RLMGHA
Trigger: GGCATGCCCCATCAGCCTTCAGCTTGAGCCCGGCGG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATCCGGCCCATAGCACCTaGGTTCATTGGCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNPAHST*VHWLRG
Trigger: GCCGCGGAGCCAATGAACTCAGGTGCTATGGGCCGG...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATTGCAGCCCGCATGGCTaGCAGTGCGGCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNCSPHG*QCGHLS
Trigger: GCTCAGATGGCCGCACTGGCAGCCATGCGGGCTGCA...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGGAACAGTGCCGTGGTaGCCAAGCTGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNGTVPW*PSWQGL
Trigger: CAGGCCCTGCCAGCTTGGGCACCACGGCACTGTTCC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTGGGTGAGGAGAGCATaGCGTGTGCCCCGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVWVRRA*RVPRLA
Trigger: CGCCAGGCGGGGCACACGGCATGCTCTCCTCACCCA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATTGGAGCTGCCATTGGTaGTTGCGGCCAGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNWSCHW*LRPGPG
Trigger: CCCTGGGCCTGGCCGCAAGCACCAATGGCAGCTCCA...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATTGGGCGGCTGCTGCTTaGACAGCTGCTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNWAAAA*TAAAWA
Trigger: AGCCCAGGCAGCAGCTGTGCAAGCAGCAGCCGCCCA...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATCTGTGCGGCCACAGCTaGTTGGGCGGCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNLCGHS*LGGCCL
Trigger: CAAGCAGCAGCCGCCCAAGCAGCTGTGGCCGCACAG...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATCTGTTCCAGGGCAGCTaGCTGTGCGGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNLFQGS*LCGHSC
Trigger: GCAGCTGTGGCCGCACAGGCAGCTGCCCTGGAACAG...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATCAGCTGCAGCCCGCATaGCTGCCAGTGCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNQLQPA*LPVRPS
Trigger: AGATGGCCGCACTGGCAGCCATGCGGGCTGCAGCTG...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGGGGGAACAGTGCCGTaGTGCCCAAGCTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVGGTVP*CPSWQG
Trigger: GCCCTGCCAGCTTGGGCACCACGGCACTGTTCCCCC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGAGCAGAGGTTGGCGTaGGGGCCGGCGGCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVEQRLA*GPAAEQ
Trigger: TTGCTCAGCCGCCGGCCCCCACGCCAACCTCTGCTC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGCGACTTCCTTCTCCTaGGCCGGGACCCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVATSFS*AGTQPR
Trigger: GCGAGGCTGGGTCCCGGCCCAGGAGAAGGAAGTCGC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGGCGGCCAGGGACTGTaGTGGGGATGGCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVGGQGL*WGWLSP
Trigger: AGGACTCAGCCATCCCCATCACAGTCCCTGGCCGCC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGTGGGGGCCGGCGGCTaGGCAAACAGAACTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVVGAGG*ANRTPV
Trigger: CACAGGAGTTCTGTTTGCTCAGCCGCCGGCCCCCAC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGAGCCCCCGTTGGCCTTaGCTGTGGGGCACCCACTCA +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVSPRWP*LWGTHS
Trigger: TGAGTGGGTGCCCCACAGTCAAGGCCAACGGGGGCT...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGCTGCCATTGGTGCTTaGGGCCAGGCCCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVAAIGA*GQAQGG
Trigger: TCCTCCCTGGGCCTGGCCGCAAGCACCAATGGCAGC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGCCTCTTCCTCACGCTaGGCTCCAGGGGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVASSSR*APGDRG
Trigger: GCCTCTGTCCCCTGGAGCCCAGCGTGAGGAAGAGGC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGCCGTGTGCCCCGCCTaGCGAGTAGGCAAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVAVCPA*RVGKEG
Trigger: TCCCTCTTTGCCTACTCGCCAGGCGGGGCACACGGC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGCAGCTGGGCCGCCATaGCCAGGAAGTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNAAGPP*PGSSAG
Trigger: TCCAGCAGAACTTCCTGGCCATGGCGGCCCAGCTGC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATTCCATCAGGGCTGCCTaGACGCCCTGGGAAACGTCT +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNSIRAA*TPWETS
Trigger: AGACGTTTCCCAGGGCGTTCAGGCAGCCCTGATGGA...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTGCTGCTTGCACAGCTaGTGCCTGGGCTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVCCLHS*CLGCHH
Trigger: GTGGTGGCAGCCCAGGCAGCAGCTGTGCAAGCAGCA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTGCATCAGCCGTTGCTaGTCATCGGCCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVCISRC*SSATRA
Trigger: GGCCCTGGTGGCCGATGAGCAGCAACGGCTGATGCA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATCGTTGCATCAGCCGTTaGTGCTCATCGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNRCISR*CSSATR
Trigger: CCTGGTGGCCGATGAGCAGCAACGGCTGATGCAACG...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCCCAGGGATCCGATGTaGTGGGCTCACAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVPRDPM*WAHSCP
Trigger: TGGGCAGCTGTGAGCCCAGCACATCGGATCCCTGGG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCCAGGGGACAGAGGCTaGCATCCGGCTCATTCACGC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVPGDRG*HPAHSR
Trigger: GCGTGAATGAGCCGGATGCCAGCCTCTGTCCCCTGG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATAAAGTGCTCCTCTCCTaGCCCTTCTCTGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNKVLLS*PFSASP
Trigger: GGGCGAGGCAGAGAAGGGCCAGGAGAGGAGCACTTT...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGAAGGCCTGGGGTGGCTaGGCCTTTCGGGGGAACAGT +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVKAWGG*AFRGNS
Trigger: ACTGTTCCCCCGAAAGGCCCAGCCACCCCAGGCCTT...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGATGCTCATGGGCAGCTaGGCCGCCATGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVMLMGS*AAMARK
Trigger: CTTCCTGGCCATGGCGGCCCAGCTGCCCATGAGCAT...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCGCCGCCTCCTTTGTTaGGAGCAGAGGTTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVRRLLC*EQRLAW
Trigger: CCACGCCAACCTCTGCTCCCAACAAAGGAGGCGGCG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGAGGGTGGGTGGCGGGTaGGGAGTGATGCGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVRVGGG*GVMRLR
Trigger: CCTTAACCGCATCACTCCCCACCCGCCACCCACCCT...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATTATCTTCCGCCATCCTaGCCCCTGTGTGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNYLPPS*PLCGPP
Trigger: AGGTGGGCCACACAGGGGCCAGGATGGCGGAAGATA...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGCTCATTGGGGTTACTaGGGCCCCGCTTCTCACACT +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNAHWGY*GPASHT
Trigger: AGTGTGAGAAGCGGGGCCTCAGTAACCCCAATGAGC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGTGTGTCCACGGCCCTaGGATCCGAGAAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVVCPRP*DPRRKW
Trigger: CCACTTCCTTCTCGGATCTCAGGGCCGTGGACACAC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATTGTTGCTGCCGTTGGTaGCCGTCAGGTTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNCCCRW*PSGSQQ
Trigger: CTGCTGTGAACCTGACGGGCACCAACGGCAGCAACA...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGGCCAGCATGGCCACTaGCTTCAGCGACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNGQHGH*LQRLPS
Trigger: AGAAGGAAGTCGCTGAAGGCAGTGGCCATGCTGGCC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATTTCACAGCAGAGTCCTaGCGGCTTTCGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNFTAES*RLSEAW
Trigger: CCAAGCCTCCGAAAGCCGCCAGGACTCTGCTGTGAA...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGTTGGGAGCAGAGGTTaGCGTGGGGGCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTVGSRG*RGGRRL
Trigger: CAGCCGCCGGCCCCCACGCCAACCTCTGCTCCCAAC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGAGGGATCCGATGTGCTaGGCTCACAGCTGCCCAACG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVRDPMC*AHSCPT
Trigger: CGTTGGGCAGCTGTGAGCCCAGCACATCGGATCCCT...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATTTTCCACGGCCAGCATaGCCACTGCCTTCAGCGACT +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNFPRPA*PLPSAT
Trigger: AGTCGCTGAAGGCAGTGGCCATGCTGGCCGTGGAAA...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGCTCAAGCTGAAGGCTaGTGGGGCATGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVAQAEG*WGMPLP
Trigger: AGGAAGAGGCATGCCCCATCAGCCTTCAGCTTGAGC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCGGAGGCTTGGCTGTTaGTCCGAATGCTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVRRLGC*SECSWA
Trigger: TGCCCATGAGCATTCGGATCAACAGCCAAGCCTCCG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGGTTCCCACGCCGTCTaGCAAACTCCAGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNGSHAV*QTPEKL
Trigger: CAGTTTCTCTGGAGTTTGTCAGACGGCGTGGGAACC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGGAGAGCATGCCGTGTaGCCCGCCTGGCGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTGEHAV*PAWRVG
Trigger: GCCTACTCGCCAGGCGGGGCACACGGCATGCTCTCC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTCAGGGCAGCTGCCTGTaGGGCCACAGCTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTQGSCL*GHSCLG
Trigger: GCCCAAGCAGCTGTGGCCGCACAGGCAGCTGCCCTG...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCTGGGAGGTGCAGGTTaGAGTGAGCCAAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVLGGAG*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAACCTGCACCTCCCAG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGCGGAAGGCCTGGGGTaGCTGGGCCTTTCGGGGGAA +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTAEGLG*LGLSGE
Trigger: TTCCCCCGAAAGGCCCAGCCACCCCAGGCCTTCCGC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATCGGCTTTCGGAGGCTTaGCTGTTGATCCGAATGCTC +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNRLSEA*LLIRML
Trigger: GAGCATTCGGATCAACAGCCAAGCCTCCGAAAGCCG...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTGCTGTTGCTGCCGTTaGTGCCCGTCAGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVCCCCR*CPSGSQ
Trigger: CTGTGAACCTGACGGGCACCAACGGCAGCAACAGCA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTCAGCCTGGCCGCCGCTaGTTCCGGTGTTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTQPGRR*FRCFLP
Trigger: GGGGAGGAAACACCGGAACCAGCGGCGGCCAGGCTG...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGATTAACTGGGCGTGGTaGCGGGCGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVINWAW*RAPVIP
Trigger: TGGGATTACAGGCGCCCGCCACCACGCCCAGTTAAT...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp CCCTTCTCCGTCACCAGCACGTACAGCATGAACAGGTCAAGGACCTGTTTGGCCGCCTGCCACCACGCCTaGTCAATTTTTGTACTCGCT +
Preference number: 4 (lower is better)
Translates to: PFSVTSTYSMNRSRTCLAACHHA*SIFVLA
Trigger: AGCGAGTACAAAAATTGACCAGGCGTGGTGGCAGGC...GGCCAAACAGGTCCTTGACCTGTTCATGCTGTACGTGCTGGTGACGGAGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457152.3
CDS-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCAGTGCAGGGATGTATaGGGTAAACAGGATCGGCCC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVQCRDV*GKQDRP
Trigger: GGGCCGATCCTGTTTACCTCATACATCCCTGCACTG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATAGTTCGAGATCAGCCTaGCCAACATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNSSRSA*PTWQNP
Trigger: GGGGTTTTGCCATGTTGGTCAGGCTGATCTCGAACT...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGTAGTTTCATGGCCCTaGGGCCCGGGCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTVVSWP*GPGHHH
Trigger: GTGGTGGTGGCCCGGGCCGCAGGGCCATGAAACTAC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGTTGCTGTCTATGGCTaGCTGGAGCTCATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNVAVYG*LELIGV
Trigger: AACCCCAATGAGCTCCAGGCAGCCATAGACAGCAAC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGAAGTTCTGCTGGAGTaGACGTTGCATCAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNEVLLE*TLHQPL
Trigger: CAACGGCTGATGCAACGTGCACTCCAGCAGAACTTC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATATGGCCAGGAAGTTCTaGTGGAGTGCACGTTGCATC +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNMARKF*WSARCI
Trigger: GATGCAACGTGCACTCCAGCAGAACTTCCTGGCCAT...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGCGGCCACAGCTGCTTaGGCGGCTGCTGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTAATAA*AAAACT
Trigger: TGTGCAAGCAGCAGCCGCCCAAGCAGCTGTGGCCGC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGAGAATCGCTTGCACCTaGGAGGTGCAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVRIACT*EVQVAV
Trigger: CACTGCAACCTGCACCTCCCAGGTGCAAGCGATTCT...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTCTTTCGGGGGAACAGTaGCGTGGTGCCCAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTLSGEQ*RGAQAG
Trigger: GCCAGCTTGGGCACCACGGCACTGTTCCCCCGAAAG...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGGTGTCCCTCGCTTCTaGATGAAGCTGAACAAGTCA +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNGVPRF*MKLNKS
Trigger: TGACTTGTTCAGCTTCATGCAGAAGCGAGGGACACC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGGCCCTCCCGTCGGTTaGTGTCTATGGCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTGPPVG*CLWLPG
Trigger: TCCAGGCAGCCATAGACAGCAACCGACGGGAGGGCC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTTGCTTGGGCGGCTGCTaGTTGCACAGCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTCLGGC*LHSCCL
Trigger: CAGGCAGCAGCTGTGCAAGCAGCAGCCGCCCAAGCA...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTAGCTGCTTGGGCGGCTaGTGCTTGCACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTSCLGG*CLHSCC
Trigger: GCAGCAGCTGTGCAAGCAGCAGCCGCCCAAGCAGCT...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCTGTCTATGGCTGCCTaGAGCTCATTGGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVLSMAA*SSLGLL
Trigger: CAGTAACCCCAATGAGCTCCAGGCAGCCATAGACAG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATAATACAAAAATTAACTaGGCGTGGTGGCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNNTKIN*AWWRAP
Trigger: AGGCGCCCGCCACCACGCCCAGTTAATTTTTGTATT...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTGTGATGGGGATGGCTaGGTCCTCCTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVCDGDG*VLLFLD
Trigger: ATCAAGAAAGAGGAGGACTCAGCCATCCCCATCACA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATAGGCAACGAGTTATTTaGGGTAGATGTGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNRQRVI*GRCGGC
Trigger: ACACCCTCCACATCTACCTCAAATAACTCGTTGCCT...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGGCGGGCAGATCACCTaGGGTCAGGAGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTGGQIT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAGGTGATCTGCCCGCC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTCCCCACGGTCCCAAGTaGACTAGAACCCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTPHGPK*TRTHPG
Trigger: CCCTGGATGGGTTCTAGTTCACTTGGGACCGTGGGG...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTAAGGCTGATGGGGCATaGCTCTTCCTCACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTKADGA*LFLTLG
Trigger: GCCCAGCGTGAGGAAGAGGCATGCCCCATCAGCCTT...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTCTTCTCCGGAGGCTCTaGAGACTCCAGCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTLLRRL*RLQLLP
Trigger: CGGGAGAAGCTGGAGTCTGCAGAGCCTCCGGAGAAG...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGAGGTACTTCATGTATTaGGTCCGCAGGGTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVRYFMY*VRRVKA
Trigger: AGCCTTCACCCTGCGGACCCAATACATGAAGTACCT...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGGCAGGAGAATCGCTTaGACCTGGGAGGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTGRRIA*TWEVQV
Trigger: AACCTGCACCTCCCAGGTGCAAGCGATTCTCCTGCC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCCTTCTCCGTCACCAGCACGTACAGCATGAACAGGTCAAGGACCTGTTTGGCCTTCACAGGTGTCCCATaGCTGCTTTTTGTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: PFSVTSTYSMNRSRTCLAFTGVP*LLFVCL
Trigger: CAAACAAACAAAAAGCAGGCATGGGACACCTGTGAA...GGCCAAACAGGTCCTTGACCTGTTCATGCTGTACGTGCTGGTGACGGAGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457152.3
CDS-3UTR CCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTCCTCCTCCTCCCATTTaGGCTTCATGTCCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTPPPPI*ASCPRR
Trigger: CCGACGAGGACATGAAGCCCAAATGGGAGGAGGAGG...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTAGGTGCAGGTTGCAGTaGGCCAAGATCGCACCATTG +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTRCRLQ*AKIAPL
Trigger: CAATGGTGCGATCTTGGCTCACTGCAACCTGCACCT...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGCTCATTCACGCATTTaGAGAAACCGAGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTAHSRI*RNRAAS
Trigger: GCTGGCGGCTCGGTTTCTGCAAATGCGTGAATGAGC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTTGCTGGAGTGCACGTTaGATCAGCCGTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTCWSAR*ISRCCS
Trigger: TGAGCAGCAACGGCTGATGCAACGTGCACTCCAGCA...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp CCCTTCTCCGTCACCAGCACGTACAGCATGAACAGGTCAAGGACCTGTTTGGCCTTTTGTACTCGCTTCTaGATGAAGCTGAACAAGTCA +
Preference number: 4 (lower is better)
Translates to: PFSVTSTYSMNRSRTCLAFCTRF*MKLNKS
Trigger: TGACTTGTTCAGCTTCATGCAGAAGCGAGTACAAAA...GGCCAAACAGGTCCTTGACCTGTTCATGCTGTACGTGCTGGTGACGGAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457152.3
CDS-3UTR CCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGCCAGGAAGTTCTGCTaGAGTGCACGTTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTARKFC*SARCIS
Trigger: GCTGATGCAACGTGCACTCCAGCAGAACTTCCTGGC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTCCAGCACGTACAGCATaGACAGGTCAAGGACCTGTT +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTPARTA*TGQGPV
Trigger: AACAGGTCCTTGACCTGTTCATGCTGTACGTGCTGG...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGTTCAGGGGTTTCACTaGACACGAGAAGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTVQGFH*TREAGS
Trigger: ACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAAC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTAAAATTAACTGGGCGTaGTGGCGGGCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTKINWA*WRAPVI
Trigger: GATTACAGGCGCCCGCCACCACGCCCAGTTAATTTT...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCAAGCAAAAGCATCGTaGAATATCACAGTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVQAKAS*NITVSN
Trigger: ATTGCTGACTGTGATATTCCACGATGCTTTTGCTTG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR TCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCTCTTTCTGTTTTTCTaGTGGATTTCTTTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVLFLFF*WISLLF
Trigger: GAACAGCAAAGAAATCCATCAGAAAAACAGAAAGAG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR GCA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGTCTGATGGATTTCTTTaGTGTTCTCACAATTCATCT +
Preference number: 4 (lower is better)
Translates to: ILVQGFHWTREAGSGECVSDGFL*CSHNSS
Trigger: AGATGAATTGTGAGAACAGCAAAGAAATCCATCAGA...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 90 bp GGCCGCCGCTGGTTCCGGTGTTTCCTCCCCGGCCGCCTGCGTTGCTaGTGCTGCCGCCGCCGCCGCCGCCTCCTTTGTTGGGAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GRRWFRCFLPGRLRC*CCRRRRRLLCWEQR
Trigger: CCTCTGCTCCCAACAAAGGAGGCGGCGGCGGCGGCGGCAGCAGCAGCAACGCAGGCGGCCGGGGAGGAAACACCGGAACCAGCGGCGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263620.8
ENST00000587532.5
CDS GCA 90 bp CCTGGCCGCCGCTGGTTCCGGTGTTTCCTCCCCGGCCGCCTGCGTTaGTGCTGCTGCCGCCGCCGCCGCCGCCTCCTTTGTTGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: PGRRWFRCFLPGRLR*CCCRRRRRLLCWEQ
Trigger: CTGCTCCCAACAAAGGAGGCGGCGGCGGCGGCGGCAGCAGCAGCAACGCAGGCGGCCGGGGAGGAAACACCGGAACCAGCGGCGGCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263620.8
ENST00000587532.5
CDS CCA 90 bp GCGGCCACAGCTGCTTGGGCGGCTGCTGCTTGCACAGCTGCTGCCTaGGCTGCCACCACAGGGTGGCCCGCCAGGGACACAGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: AATAAWAAAACTAAA*AATTGWPARDTGRR
Trigger: CCGCCTGCCTGTGTCCCTGGCGGGCCACCCTGTGGTGGCAGCCCAGGCAGCAGCTGTGCAAGCAGCAGCCGCCCAAGCAGCTGTGGCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS TCA 90 bp CCCAGGCCCGCAGCTGCAGCCCGCATGGCTGCCAGTGCGGCCATCTaGGCCCGCTGCATCCGGGCACTCTCGGGCTCTCTGTCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: PRPAAAARMAASAAI*ARCIRALSGSLSSS
Trigger: CGACGAGGACAGAGAGCCCGAGAGTGCCCGGATGCAGCGGGCTCAGATGGCCGCACTGGCAGCCATGCGGGCTGCAGCTGCGGGCCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 90 bp AGGGCAGCTGCCTGTGCGGCCACAGCTGCTTGGGCGGCTGCTGCTTaGACAGCTGCTGCCTGGGCTGCCACCACAGGGTGGCCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: RAAACAATAAWAAAA*TAAAWAATTGWPAR
Trigger: CCTGGCGGGCCACCCTGTGGTGGCAGCCCAGGCAGCAGCTGTGCAAGCAGCAGCCGCCCAAGCAGCTGTGGCCGCACAGGCAGCTGCCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 90 bp CCCAGCACCCTGGGAACGCCATCGCCGCGGAAGGCCTGGGGTGGCTaGGCCTTTCGGGGGAACAGTGCCGTGGTGCCCAAGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PSTLGTPSPRKAWGG*AFRGNSAVVPKLAG
Trigger: CCCTGCCAGCTTGGGCACCACGGCACTGTTCCCCCGAAAGGCCCAGCCACCCCAGGCCTTCCGCGGCGATGGCGTTCCCAGGGTGCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263620.8
ENST00000587532.5
CDS CCA 90 bp GCGGCTGCTGCTTGCACAGCTGCTGCCTGGGCTGCCACCACAGGGTaGCCCGCCAGGGACACAGGCAGGCGGCCAGGGACTGTGATGGGG +
Preference number: 5 (lower is better)
Translates to: AAAACTAAAWAATTG*PARDTGRRPGTVMG
Trigger: CCCCATCACAGTCCCTGGCCGCCTGCCTGTGTCCCTGGCGGGCCACCCTGTGGTGGCAGCCCAGGCAGCAGCTGTGCAAGCAGCAGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 90 bp TGCCTGTGCGGCCACAGCTGCTTGGGCGGCTGCTGCTTGCACAGCTaGTGCCTGGGCTGCCACCACAGGGTGGCCCGCCAGGGACACAGG +
Preference number: 5 (lower is better)
Translates to: CLCGHSCLGGCCLHS*CLGCHHRVARQGHR
Trigger: CCTGTGTCCCTGGCGGGCCACCCTGTGGTGGCAGCCCAGGCAGCAGCTGTGCAAGCAGCAGCCGCCCAAGCAGCTGTGGCCGCACAGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 90 bp TTCCAGGGCAGCTGCCTGTGCGGCCACAGCTGCTTGGGCGGCTGCTaGTTGCACAGCTGCTGCCTGGGCTGCCACCACAGGGTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: FQGSCLCGHSCLGGC*LHSCCLGCHHRVAR
Trigger: GCGGGCCACCCTGTGGTGGCAGCCCAGGCAGCAGCTGTGCAAGCAGCAGCCGCCCAAGCAGCTGTGGCCGCACAGGCAGCTGCCCTGGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 90 bp CTGTTCCAGGGCAGCTGCCTGTGCGGCCACAGCTGCTTGGGCGGCTaGTGCTTGCACAGCTGCTGCCTGGGCTGCCACCACAGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LFQGSCLCGHSCLGG*CLHSCCLGCHHRVA
Trigger: GGCCACCCTGTGGTGGCAGCCCAGGCAGCAGCTGTGCAAGCAGCAGCCGCCCAAGCAGCTGTGGCCGCACAGGCAGCTGCCCTGGAACAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 90 bp CCCCTGGCCGTGCCCTGCTCGCCCGCACACCTAGGTTCAAGCAGGTaGGACCAGGCGCAACTCAGGGTCCTGAGTTCACGGCGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: PLAVPCSPAHLGSSR*DQAQLRVLSSRRRE
Trigger: CTCCCGCCGCCGTGAACTCAGGACCCTGAGTTGCGCCTGGTCCCACCTGCTTGAACCTAGGTGTGCGGGCGAGCAGGGCACGGCCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590749.2
CDS GCA 90 bp GCCGCTGCAACAGCGTCTCCATCACGGCCTGTAGTTTCATGGCCCTaGGGCCCGGGCCACCACCACCACCACCACCACCACCACCACGGG +
Preference number: 5 (lower is better)
Translates to: AAATASPSRPVVSWP*GPGHHHHHHHHHHG
Trigger: CCCGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCCCGGGCCGCAGGGCCATGAAACTACAGGCCGTGATGGAGACGCTGTTGCAGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 90 bp TCCCGCAGCTGTTCCAGGGCAGCTGCCTGTGCGGCCACAGCTGCTTaGGCGGCTGCTGCTTGCACAGCTGCTGCCTGGGCTGCCACCACA +
Preference number: 5 (lower is better)
Translates to: SRSCSRAAACAATAA*AAAACTAAAWAATT
Trigger: TGTGGTGGCAGCCCAGGCAGCAGCTGTGCAAGCAGCAGCCGCCCAAGCAGCTGTGGCCGCACAGGCAGCTGCCCTGGAACAGCTGCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 90 bp CGGCCAGGCCCAGGGAGGACACGGGTAGCTTGGGTGAGGAGAGCATaGCGTGTGCCCCGCCTGGCGAGTAGGCAAAGAGGGAGCCACCAA +
Preference number: 5 (lower is better)
Translates to: RPGPGRTRVAWVRRA*RVPRLASRQRGSHQ
Trigger: TTGGTGGCTCCCTCTTTGCCTACTCGCCAGGCGGGGCACACGGCATGCTCTCCTCACCCAAGCTACCCGTGTCCTCCCTGGGCCTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263620.8
ENST00000585733.2
ENST00000587532.5
CDS CCA 90 bp GCTGCTGCCGCTGCAACAGCGTCTCCATCACGGCCTGTAGTTTCATaGCCCTGCGGCCCGGGCCACCACCACCACCACCACCACCACCAC +
Preference number: 5 (lower is better)
Translates to: AAAAATASPSRPVVS*PCGPGHHHHHHHHH
Trigger: GTGGTGGTGGTGGTGGTGGTGGTGGTGGCCCGGGCCGCAGGGCCATGAAACTACAGGCCGTGATGGAGACGCTGTTGCAGCGGCAGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 90 bp GCTGCTGCCGCCGCCGCCGCCGCCTCCTTTGTTGGGAGCAGAGGTTaGCGTGGGGGCCGGCGGCTGAGCAAACAGAACTCCTGTGTACAT +
Preference number: 5 (lower is better)
Translates to: AAAAAAAASFVGSRG*RGGRRLSKQNSCVH
Trigger: ATGTACACAGGAGTTCTGTTTGCTCAGCCGCCGGCCCCCACGCCAACCTCTGCTCCCAACAAAGGAGGCGGCGGCGGCGGCGGCAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263620.8
ENST00000587532.5
CDS CCA 90 bp TGCCATTGGTGCTTGCGGCCAGGCCCAGGGAGGACACGGGTAGCTTaGGTGAGGAGAGCATGCCGTGTGCCCCGCCTGGCGAGTAGGCAA +
Preference number: 5 (lower is better)
Translates to: CHWCLRPGPGRTRVA*VRRACRVPRLASRQ
Trigger: TTGCCTACTCGCCAGGCGGGGCACACGGCATGCTCTCCTCACCCAAGCTACCCGTGTCCTCCCTGGGCCTGGCCGCAAGCACCAATGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263620.8
ENST00000585733.2
ENST00000587532.5
CDS CCA 90 bp TGGAGGCAGAGGCGCAGGCTCTTCGCATACAGCCTACTGTGGGCCTaGGTAGCAAGGTCGCCCCGCACGGGGCCACAGAGAAACACGCTG +
Preference number: 5 (lower is better)
Translates to: WRQRRRLFAYSLLWA*VARSPRTGPQRNTL
Trigger: CAGCGTGTTTCTCTGTGGCCCCGTGCGGGGCGACCTTGCTACCCAGGCCCACAGTAGGCTGTATGCGAAGAGCCTGCGCCTCTGCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS GCA 90 bp GCTCATGGGCAGCTGGGCCGCCATGGCCAGGAAGTTCTGCTGGAGTaGACGTTGCATCAGCCGTTGCTGCTCATCGGCCACCAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: AHGQLGRHGQEVLLE*TLHQPLLLIGHQGH
Trigger: ATGGCCCTGGTGGCCGATGAGCAGCAACGGCTGATGCAACGTGCACTCCAGCAGAACTTCCTGGCCATGGCGGCCCAGCTGCCCATGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 90 bp CCTTCTTGGAGGCAGAGGCGCAGGCTCTTCGCATACAGCCTACTGTaGGCCTGGGTAGCAAGGTCGCCCCGCACGGGGCCACAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: PSWRQRRRLFAYSLL*AWVARSPRTGPQRN
Trigger: GTTTCTCTGTGGCCCCGTGCGGGGCGACCTTGCTACCCAGGCCCACAGTAGGCTGTATGCGAAGAGCCTGCGCCTCTGCCTCCAAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS GCA 90 bp TCCCATTTGGGCTTCATGTCCTCGTCGGAGGCCATGTCCTCAAAGTaGTCCTCTCCTGGCCCTTCTCTGCCTCGCCCGGGTGAGCCCGGT +
Preference number: 5 (lower is better)
Translates to: SHLGFMSSSEAMSSK*SSPGPSLPRPGEPG
Trigger: ACCGGGCTCACCCGGGCGAGGCAGAGAAGGGCCAGGAGAGGAGCACTTTGAGGACATGGCCTCCGACGAGGACATGAAGCCCAAATGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 90 bp GGCAGCTGGGCCGCCATGGCCAGGAAGTTCTGCTGGAGTGCACGTTaGATCAGCCGTTGCTGCTCATCGGCCACCAGGGCCATCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GSWAAMARKFCWSAR*ISRCCSSATRAIFF
Trigger: GAAGAAGATGGCCCTGGTGGCCGATGAGCAGCAACGGCTGATGCAACGTGCACTCCAGCAGAACTTCCTGGCCATGGCGGCCCAGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 90 bp ATGGGGCATGCCTCTTCCTCACGCTGGGCTCCAGGGGACAGAGGCTaGCATCCGGCTCATTCACGCATTTGCAGAAACCGAGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: MGHASSSRWAPGDRG*HPAHSRICRNRAAS
Trigger: GCTGGCGGCTCGGTTTCTGCAAATGCGTGAATGAGCCGGATGCCAGCCTCTGTCCCCTGGAGCCCAGCGTGAGGAAGAGGCATGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 90 bp CGAATGCTCATGGGCAGCTGGGCCGCCATGGCCAGGAAGTTCTGCTaGAGTGCACGTTGCATCAGCCGTTGCTGCTCATCGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: RMLMGSWAAMARKFC*SARCISRCCSSATR
Trigger: CCTGGTGGCCGATGAGCAGCAACGGCTGATGCAACGTGCACTCCAGCAGAACTTCCTGGCCATGGCGGCCCAGCTGCCCATGAGCATTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 90 bp ATCCGAATGCTCATGGGCAGCTGGGCCGCCATGGCCAGGAAGTTCTaGTGGAGTGCACGTTGCATCAGCCGTTGCTGCTCATCGGCCACC +
Preference number: 5 (lower is better)
Translates to: IRMLMGSWAAMARKF*WSARCISRCCSSAT
Trigger: GGTGGCCGATGAGCAGCAACGGCTGATGCAACGTGCACTCCAGCAGAACTTCCTGGCCATGGCGGCCCAGCTGCCCATGAGCATTCGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 90 bp CGCCCCGCACGGGGCCACAGAGAAACACGCTGTGGCCAGACTGTCTaGCCCAGGAGATCTTGGATTATTGCTTCACAAGCAGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: RPARGHRETRCGQTV*PRRSWIIASQAGWG
Trigger: CCCCCACCCTGCTTGTGAAGCAATAATCCAAGATCTCCTGGGGCAGACAGTCTGGCCACAGCGTGTTTCTCTGTGGCCCCGTGCGGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS CCA 90 bp TCTTGGATTATTGCTTCACAAGCAGGGTGGGGGAATGGGCGTTCCTaGCCTGTGATTGGCCAGCGGGCTCCGGGCCCCAGTCAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: SWIIASQAGWGNGRS*PVIGQRAPGPSQVG
Trigger: ACCCACCTGACTGGGGCCCGGAGCCCGCTGGCCAATCACAGGCCAGGAACGCCCATTCCCCCACCCTGCTTGTGAAGCAATAATCCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS TCA 90 bp TTATTGCTTCACAAGCAGGGTGGGGGAATGGGCGTTCCTGGCCTGTaGTTGGCCAGCGGGCTCCGGGCCCCAGTCAGGTGGGTTCTAAGT +
Preference number: 5 (lower is better)
Translates to: LLLHKQGGGMGVPGL*LASGLRAPVRWVLS
Trigger: ACTTAGAACCCACCTGACTGGGGCCCGGAGCCCGCTGGCCAATCACAGGCCAGGAACGCCCATTCCCCCACCCTGCTTGTGAAGCAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS TCA 90 bp CTGAGCGTGGTACCGGGTGAACGATGGTATCCTCTCCATCAGTCTTaGCTGTTTGTCCTGCAAAGCCCCTGGCCGTGCCCTGCTCGCCCG +
Preference number: 5 (lower is better)
Translates to: LSVVPGERWYPLHQS*LFVLQSPWPCPARP
Trigger: CGGGCGAGCAGGGCACGGCCAGGGGCTTTGCAGGACAAACAGTCAAGACTGATGGAGAGGATACCATCGTTCACCCGGTACCACGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590749.2
CDS GCA 90 bp GCCATGGCCAGGAAGTTCTGCTGGAGTGCACGTTGCATCAGCCGTTaGTGCTCATCGGCCACCAGGGCCATCTTCTTCTCCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: AMARKFCWSARCISR*CSSATRAIFFSGGS
Trigger: AGAGCCTCCGGAGAAGAAGATGGCCCTGGTGGCCGATGAGCAGCAACGGCTGATGCAACGTGCACTCCAGCAGAACTTCCTGGCCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 90 bp CGGCTTTCGGAGGCTTGGCTGTTGATCCGAATGCTCATGGGCAGCTaGGCCGCCATGGCCAGGAAGTTCTGCTGGAGTGCACGTTGCATC +
Preference number: 5 (lower is better)
Translates to: RLSEAWLLIRMLMGS*AAMARKFCWSARCI
Trigger: GATGCAACGTGCACTCCAGCAGAACTTCCTGGCCATGGCGGCCCAGCTGCCCATGAGCATTCGGATCAACAGCCAAGCCTCCGAAAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263620.8
ENST00000590749.2
CDS CCA 90 bp ATGGGGCATGCCTCTTCCTCACGCTGGGCTCCAGGGGACAGAGGCTaGCATCCGGCTCATTCACGCATTTGCAGAAACCTGGAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: MGHASSSRWAPGDRG*HPAHSRICRNLEAF
Trigger: GAAGGCCTCCAGGTTTCTGCAAATGCGTGAATGAGCCGGATGCCAGCCTCTGTCCCCTGGAGCCCAGCGTGAGGAAGAGGCATGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS CCA 90 bp ATGGGGCATGCCTCTTCCTCACGCTGGGCTCCAGGGGACAGAGGCTaGCATCCGGCTCATTCACGCATTTGCAGAAACCTGGCCGGTGAT +
Preference number: 5 (lower is better)
Translates to: MGHASSSRWAPGDRG*HPAHSRICRNLAGD
Trigger: ATCACCGGCCAGGTTTCTGCAAATGCGTGAATGAGCCGGATGCCAGCCTCTGTCCCCTGGAGCCCAGCGTGAGGAAGAGGCATGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585895.1
CDS-3UTR CAA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATAGCTGCCATTGGTGCTaGCGGCCAGGCCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNSCHWC*RPGPGR
Trigger: CCTCCCTGGGCCTGGCCGCAAGCACCAATGGCAGCT...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATTGCGGCCACAGCTGCTaGGGCGGCTGCTGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNCGHSC*GGCCLH
Trigger: GTGCAAGCAGCAGCCGCCCAAGCAGCTGTGGCCGCA...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGAGCCCCCGTTGGCCTaGACTGTGGGGCACCCACTC +
Preference number: 5 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNEPPLA*TVGHPL
Trigger: GAGTGGGTGCCCCACAGTCAAGGCCAACGGGGGCTC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 90 bp ATGGCCAGGAAGTTCTGCTGGAGTGCACGTTGCATCAGCCGTTGCTaGTCATCGGCCACCAGGGCCATCTTCTTCTCCGGAGGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: MARKFCWSARCISRC*SSATRAIFFSGGSA
Trigger: TGCAGAGCCTCCGGAGAAGAAGATGGCCCTGGTGGCCGATGAGCAGCAACGGCTGATGCAACGTGCACTCCAGCAGAACTTCCTGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 90 bp ACTGTCTGCCCCAGGAGATCTTGGATTATTGCTTCACAAGCAGGGTaGGGGAATGGGCGTTCCTGGCCTGTGATTGGCCAGCGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: TVCPRRSWIIASQAG*GNGRSWPVIGQRAP
Trigger: CGGAGCCCGCTGGCCAATCACAGGCCAGGAACGCCCATTCCCCCACCCTGCTTGTGAAGCAATAATCCAAGATCTCCTGGGGCAGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS-3UTR CAA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGTGATGGAGCTGCCATaGGTGCTTGCGGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNVMELP*VLAARP
Trigger: GGGCCTGGCCGCAAGCACCAATGGCAGCTCCATCAC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATCCGCCGCCTCCTTTGTaGGGAGCAGAGGTTGGCGTG +
Preference number: 5 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNPPPPL*GAEVGV
Trigger: CACGCCAACCTCTGCTCCCAACAAAGGAGGCGGCGG...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGCTGCCTGGAGCTCATaGGGGTTACTGAGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: ILVQGFHWTREAGSGECVAAWSS*GLLRPR
Trigger: GCGGGGCCTCAGTAACCCCAATGAGCTCCAGGCAGC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGACATGCTGATGCTGTaGCTGCCGTTGGTGCCCGTC +
Preference number: 5 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNDMLML*LPLVPV
Trigger: GACGGGCACCAACGGCAGCAACAGCATCAGCATGTC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGCTGCTGGAGTGCACGTaGCATCAGCCGTTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: ILVQGFHWTREAGSGECVLLECT*HQPLLL
Trigger: GAGCAGCAACGGCTGATGCAACGTGCACTCCAGCAG...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATATGCTGTTGCTGCCGTaGGTGCCCGTCAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNMLLLP*VPVRFT
Trigger: TGTGAACCTGACGGGCACCAACGGCAGCAACAGCAT...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGAGGCAGGAGAATCGCTaGCACCTGGGAGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: ILVQGFHWTREAGSGECVRQENR*HLGGAG
Trigger: ACCTGCACCTCCCAGGTGCAAGCGATTCTCCTGCCT...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATCAGGTACTTCATGTATaGGGTCCGCAGGGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNQVLHV*GPQGEG
Trigger: GCCTTCACCCTGCGGACCCAATACATGAAGTACCTG...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGAGTCCTCCTCTTTCTaGATCTTAGGGGCGGGGGTG +
Preference number: 5 (lower is better)
Translates to: ILVQGFHWTREAGSGECVESSSF*ILGAGV
Trigger: CACCCCCGCCCCTAAGATCAAGAAAGAGGAGGACTC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp ATCTTGGTTCAGGGGTTTCACTGGACACGAGAAGCTGGGAGTGGTGAGTGTGTGGCGGCTTTCGGAGGCTaGGCTGTTGATCCGAATGCT +
Preference number: 5 (lower is better)
Translates to: ILVQGFHWTREAGSGECVAAFGG*AVDPNA
Trigger: AGCATTCGGATCAACAGCCAAGCCTCCGAAAGCCGC...CACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTCCGCCGCCGCCTCCTTaGTTGGGAGCAGAGGTTGGC +
Preference number: 5 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTPPPPP*LGAEVG
Trigger: GCCAACCTCTGCTCCCAACAAAGGAGGCGGCGGCGG...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS TCA 90 bp TATGTATCTGTGGACGACCCCCTCTGGGCTGAGCGTGGTACCGGGTaGACGATGGTATCCTCTCCATCAGTCTTGACTGTTTGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: YVSVDDPLWAERGTG*TMVSSPSVLTVCPA
Trigger: TGCAGGACAAACAGTCAAGACTGATGGAGAGGATACCATCGTTCACCCGGTACCACGCTCAGCCCAGAGGGGGTCGTCCACAGATACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590749.2
CDS-3UTR CAA 90 bp CCTGACTCGAGAGCCCAGCAGACAAGCACGGCACAAGCAAAAGCATCGTGGAATGTGTACATGATGCCGTaGATCTCCACCGACATGCTG +
Preference number: 5 (lower is better)
Translates to: PDSRAQQTSTAQAKASWNVYMMP*ISTDML
Trigger: CAGCATGTCGGTGGAGATCAACGGCATCATGTACAC...ATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTCTGCTGGGCTCTCGAGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGGCAGGTTGAGGCCCTaGGTGATCTCACGCCACAGC +
Preference number: 5 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTGRLRP*VISRHS
Trigger: GCTGTGGCGTGAGATCACCAAGGGCCTCAACCTGCC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTACGTTGCATCAGCCGTaGCTGCTCATCGGCCACCAG +
Preference number: 5 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTTLHQP*LLIGHQ
Trigger: CTGGTGGCCGATGAGCAGCAACGGCTGATGCAACGT...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTGGCTCATTCACGCATTaGCAGAAACCGAGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTGSFTH*QKPSRQ
Trigger: CTGGCGGCTCGGTTTCTGCAAATGCGTGAATGAGCC...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTTCGGAGGCTTGGCTGTaGATCCGAATGCTCATGGGC +
Preference number: 5 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTSEAWL*IRMLMG
Trigger: GCCCATGAGCATTCGGATCAACAGCCAAGCCTCCGA...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTTCACGCCACAGCTTCTaGTTGATGACCTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTSRHSF*LMTSTR
Trigger: CCTCGTGGAGGTCATCAACAAGAAGCTGTGGCGTGA...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTAAAAATTCAGTGATCTaGGTTCAGGGGTTTCACTGG +
Preference number: 5 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTKNSVI*VQGFHW
Trigger: CCAGTGAAACCCCTGAACCAAGATCACTGAATTTTT...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS-3UTR CAA 90 bp GACAAGCACGGCACAAGCAAAAGCATCGTGGAATATCACAGTCAGCAATTCACTACAAAGGGACCCAAATaGGTCATGGGAAAAATAAAA +
Preference number: 5 (lower is better)
Translates to: DKHGTSKSIVEYHSQQFTTKGPK*VMGKIK
Trigger: TTTTATTTTTCCCATGACCAATTTGGGTCCCTTTGT...AGTGAATTGCTGACTGTGATATTCCACGATGCTTTTGCTTGTGCCGTGCTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 72 bp GCCTGGGGGCCCATCCTCAGAGCCGCCGGGGCTGGCTaGGTGTCCCAGGCCCGCAGCTGCAGCCCGCATGGC +
Preference number: 6 (lower is better)
Translates to: AWGPILRAAGAG*VSQARSCSPHG
Trigger: GCCATGCGGGCTGCAGCTGCGGGCCTGGGACACCCAGCCAGCCCCGGCGGCTCTGAGGATGGGCCCCCAGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 72 bp TGCTGCTGCTGCCGCCGCCGCCGCCGCCTCCTTTGTTaGGAGCAGAGGTTGGCGTGGGGGCCGGCGGCTGAG +
Preference number: 6 (lower is better)
Translates to: CCCCRRRRRLLC*EQRLAWGPAAE
Trigger: CTCAGCCGCCGGCCCCCACGCCAACCTCTGCTCCCAACAAAGGAGGCGGCGGCGGCGGCGGCAGCAGCAGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263620.8
ENST00000587532.5
CDS CAA 90 bp CAGGGCAGCTGCCTGTGCGGCCACAGCTGCTTGGGCGGCTGCTGCTaGCACAGCTGCTGCCTGGGCTGCCACCACAGGGTGGCCCGCCAG +
Preference number: 6 (lower is better)
Translates to: QGSCLCGHSCLGGCC*HSCCLGCHHRVARQ
Trigger: CTGGCGGGCCACCCTGTGGTGGCAGCCCAGGCAGCAGCTGTGCAAGCAGCAGCCGCCCAAGCAGCTGTGGCCGCACAGGCAGCTGCCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 72 bp TCCCAGGCCCGCAGCTGCAGCCCGCATGGCTGCCAGTaGGGCCATCTGAGCCCGCTGCATCCGGGCACTCTC +
Preference number: 6 (lower is better)
Translates to: SQARSCSPHGCQ*GHLSPLHPGTL
Trigger: GAGAGTGCCCGGATGCAGCGGGCTCAGATGGCCGCACTGGCAGCCATGCGGGCTGCAGCTGCGGGCCTGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 72 bp CACCCTGGGAACGCCATCGCCGCGGAAGGCCTGGGGTaGCTGGGCCTTTCGGGGGAACAGTGCCGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: HPGNAIAAEGLG*LGLSGEQCRGA
Trigger: GGCACCACGGCACTGTTCCCCCGAAAGGCCCAGCCACCCCAGGCCTTCCGCGGCGATGGCGTTCCCAGGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263620.8
ENST00000587532.5
CDS CCA 72 bp GCTTGCACAGCTGCTGCCTGGGCTGCCACCACAGGGTaGCCCGCCAGGGACACAGGCAGGCGGCCAGGGACT +
Preference number: 6 (lower is better)
Translates to: ACTAAAWAATTG*PARDTGRRPGT
Trigger: AGTCCCTGGCCGCCTGCCTGTGTCCCTGGCGGGCCACCCTGTGGTGGCAGCCCAGGCAGCAGCTGTGCAAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 72 bp CTGGGAACGCCATCGCCGCGGAAGGCCTGGGGTGGCTaGGCCTTTCGGGGGAACAGTGCCGTGGTGCCCAAG +
Preference number: 6 (lower is better)
Translates to: LGTPSPRKAWGG*AFRGNSAVVPK
Trigger: CTTGGGCACCACGGCACTGTTCCCCCGAAAGGCCCAGCCACCCCAGGCCTTCCGCGGCGATGGCGTTCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263620.8
ENST00000587532.5
CDS CCA 72 bp GCCGCCGCCGCCGCCTCCTTTGTTGGGAGCAGAGGTTaGCGTGGGGGCCGGCGGCTGAGCAAACAGAACTCC +
Preference number: 6 (lower is better)
Translates to: AAAAASFVGSRG*RGGRRLSKQNS
Trigger: GGAGTTCTGTTTGCTCAGCCGCCGGCCCCCACGCCAACCTCTGCTCCCAACAAAGGAGGCGGCGGCGGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263620.8
ENST00000587532.5
CDS CAA 90 bp CTCCCGCAGCTGTTCCAGGGCAGCTGCCTGTGCGGCCACAGCTGCTaGGGCGGCTGCTGCTTGCACAGCTGCTGCCTGGGCTGCCACCAC +
Preference number: 6 (lower is better)
Translates to: LPQLFQGSCLCGHSC*GGCCLHSCCLGCHH
Trigger: GTGGTGGCAGCCCAGGCAGCAGCTGTGCAAGCAGCAGCCGCCCAAGCAGCTGTGGCCGCACAGGCAGCTGCCCTGGAACAGCTGCGGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS TCA 72 bp CACAAGCAGGGTGGGGGAATGGGCGTTCCTGGCCTGTaGTTGGCCAGCGGGCTCCGGGCCCCAGTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: HKQGGGMGVPGL*LASGLRAPVRW
Trigger: CCACCTGACTGGGGCCCGGAGCCCGCTGGCCAATCACAGGCCAGGAACGCCCATTCCCCCACCCTGCTTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS CCA 72 bp AGCAGGGTGGGGGAATGGGCGTTCCTGGCCTGTGATTaGCCAGCGGGCTCCGGGCCCCAGTCAGGTGGGTTC +
Preference number: 6 (lower is better)
Translates to: SRVGEWAFLACD*PAGSGPQSGGF
Trigger: GAACCCACCTGACTGGGGCCCGGAGCCCGCTGGCCAATCACAGGCCAGGAACGCCCATTCCCCCACCCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS CAA 72 bp CTGTTCCAGGGCAGCTGCCTGTGCGGCCACAGCTGCTaGGGCGGCTGCTGCTTGCACAGCTGCTGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: LFQGSCLCGHSC*GGCCLHSCCLG
Trigger: GCCCAGGCAGCAGCTGTGCAAGCAGCAGCCGCCCAAGCAGCTGTGGCCGCACAGGCAGCTGCCCTGGAACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 72 bp AGGCAGAGGCGCAGGCTCTTCGCATACAGCCTACTGTaGGCCTGGGTAGCAAGGTCGCCCCGCACGGGGCCA +
Preference number: 6 (lower is better)
Translates to: RQRRRLFAYSLL*AWVARSPRTGP
Trigger: TGGCCCCGTGCGGGGCGACCTTGCTACCCAGGCCCACAGTAGGCTGTATGCGAAGAGCCTGCGCCTCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS GCA 72 bp ACAGCGTCTCCATCACGGCCTGTAGTTTCATGGCCCTaGGGCCCGGGCCACCACCACCACCACCACCACCAC +
Preference number: 6 (lower is better)
Translates to: TASPSRPVVSWP*GPGHHHHHHHH
Trigger: GTGGTGGTGGTGGTGGTGGTGGTGGCCCGGGCCGCAGGGCCATGAAACTACAGGCCGTGATGGAGACGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 72 bp CCAGGGAGGACACGGGTAGCTTGGGTGAGGAGAGCATaGCGTGTGCCCCGCCTGGCGAGTAGGCAAAGAGGG +
Preference number: 6 (lower is better)
Translates to: PGRTRVAWVRRA*RVPRLASRQRG
Trigger: CCCTCTTTGCCTACTCGCCAGGCGGGGCACACGGCATGCTCTCCTCACCCAAGCTACCCGTGTCCTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263620.8
ENST00000585733.2
ENST00000587532.5
CDS CCA 72 bp GCTGCAACAGCGTCTCCATCACGGCCTGTAGTTTCATaGCCCTGCGGCCCGGGCCACCACCACCACCACCAC +
Preference number: 6 (lower is better)
Translates to: AATASPSRPVVS*PCGPGHHHHHH
Trigger: GTGGTGGTGGTGGTGGTGGCCCGGGCCGCAGGGCCATGAAACTACAGGCCGTGATGGAGACGCTGTTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 72 bp AGGCGCAGGCTCTTCGCATACAGCCTACTGTGGGCCTaGGTAGCAAGGTCGCCCCGCACGGGGCCACAGAGA +
Preference number: 6 (lower is better)
Translates to: RRRLFAYSLLWA*VARSPRTGPQR
Trigger: TCTCTGTGGCCCCGTGCGGGGCGACCTTGCTACCCAGGCCCACAGTAGGCTGTATGCGAAGAGCCTGCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS CCA 72 bp ATTGCTTCACAAGCAGGGTGGGGGAATGGGCGTTCCTaGCCTGTGATTGGCCAGCGGGCTCCGGGCCCCAGT +
Preference number: 6 (lower is better)
Translates to: IASQAGWGNGRS*PVIGQRAPGPS
Trigger: ACTGGGGCCCGGAGCCCGCTGGCCAATCACAGGCCAGGAACGCCCATTCCCCCACCCTGCTTGTGAAGCAAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS CCA 72 bp GTGCCCTGCTCGCCCGCACACCTAGGTTCAAGCAGGTaGGACCAGGCGCAACTCAGGGTCCTGAGTTCACGG +
Preference number: 6 (lower is better)
Translates to: VPCSPAHLGSSR*DQAQLRVLSSR
Trigger: CCGTGAACTCAGGACCCTGAGTTGCGCCTGGTCCCACCTGCTTGAACCTAGGTGTGCGGGCGAGCAGGGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590749.2
CDS CAA 72 bp GGCCGCCATGGCCAGGAAGTTCTGCTGGAGTGCACGTaGCATCAGCCGTTGCTGCTCATCGGCCACCAGGGC +
Preference number: 6 (lower is better)
Translates to: GRHGQEVLLECT*HQPLLLIGHQG
Trigger: GCCCTGGTGGCCGATGAGCAGCAACGGCTGATGCAACGTGCACTCCAGCAGAACTTCCTGGCCATGGCGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 72 bp CAGCTGGGCCGCCATGGCCAGGAAGTTCTGCTGGAGTaGACGTTGCATCAGCCGTTGCTGCTCATCGGCCAC +
Preference number: 6 (lower is better)
Translates to: QLGRHGQEVLLE*TLHQPLLLIGH
Trigger: GTGGCCGATGAGCAGCAACGGCTGATGCAACGTGCACTCCAGCAGAACTTCCTGGCCATGGCGGCCCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CAA 90 bp GGGCAGCTGGGCCGCCATGGCCAGGAAGTTCTGCTGGAGTGCACGTaGCATCAGCCGTTGCTGCTCATCGGCCACCAGGGCCATCTTCTT +
Preference number: 6 (lower is better)
Translates to: GQLGRHGQEVLLECT*HQPLLLIGHQGHLL
Trigger: AAGAAGATGGCCCTGGTGGCCGATGAGCAGCAACGGCTGATGCAACGTGCACTCCAGCAGAACTTCCTGGCCATGGCGGCCCAGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CAA 90 bp TCGGAGGCTTTCTTGATCTTAGGGGCGGGGGTGATGGAGCTGCCATaGGTGCTTGCGGCCAGGCCCAGGGAGGACACGGGTAGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: SEAFLILGAGVMELP*VLAARPREDTGSLG
Trigger: ACCCAAGCTACCCGTGTCCTCCCTGGGCCTGGCCGCAAGCACCAATGGCAGCTCCATCACCCCCGCCCCTAAGATCAAGAAAGCCTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587532.5
CDS CAA 90 bp TCCTCCTCTTTCTTGATCTTAGGGGCGGGGGTGATGGAGCTGCCATaGGTGCTTGCGGCCAGGCCCAGGGAGGACACGGGTAGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: SSSFLILGAGVMELP*VLAARPREDTGSLG
Trigger: ACCCAAGCTACCCGTGTCCTCCCTGGGCCTGGCCGCAAGCACCAATGGCAGCTCCATCACCCCCGCCCCTAAGATCAAGAAAGAGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CAA 90 bp CCCTTACCTTTCTTGATCTTAGGGGCGGGGGTGATGGAGCTGCCATaGGTGCTTGCGGCCAGGCCCAGGGAGGACACGGGTAGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: PLPFLILGAGVMELP*VLAARPREDTGSLG
Trigger: ACCCAAGCTACCCGTGTCCTCCCTGGGCCTGGCCGCAAGCACCAATGGCAGCTCCATCACCCCCGCCCCTAAGATCAAGAAAGGTAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585733.2
CDS GCA 72 bp TTGACTGTTTGTCCTGCAAAGCCCCTGGCCGTGCCCTaGTCGCCCGCACACCTAGGTTCAAGCAGGTGGGAC +
Preference number: 6 (lower is better)
Translates to: LTVCPAKPLAVP*SPAHLGSSRWD
Trigger: GTCCCACCTGCTTGAACCTAGGTGTGCGGGCGAGCAGGGCACGGCCAGGGGCTTTGCAGGACAAACAGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590749.2
CDS CAA 90 bp AGGCAGGGCGTGGCCTCAGGGGTCCTACCTGTGTACATGATGCCGTaGATCTCCACCGACATGCTGATGCTGTTGCTGCCGTTGGTGCCC +
Preference number: 6 (lower is better)
Translates to: RQGVASGVLPVYMMP*ISTDMLMLLLPLVP
Trigger: GGGCACCAACGGCAGCAACAGCATCAGCATGTCGGTGGAGATCAACGGCATCATGTACACAGGTAGGACCCCTGAGGCCACGCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590749.2
CDS CCA 72 bp GCCTCTTCCTCACGCTGGGCTCCAGGGGACAGAGGCTaGCATCCGGCTCATTCACGCATTTGCAGAAACCGA +
Preference number: 6 (lower is better)
Translates to: ASSSRWAPGDRG*HPAHSRICRNR
Trigger: TCGGTTTCTGCAAATGCGTGAATGAGCCGGATGCCAGCCTCTGTCCCCTGGAGCCCAGCGTGAGGAAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 72 bp GAGGCTTGGCTGTTGATCCGAATGCTCATGGGCAGCTaGGCCGCCATGGCCAGGAAGTTCTGCTGGAGTGCA +
Preference number: 6 (lower is better)
Translates to: EAWLLIRMLMGS*AAMARKFCWSA
Trigger: TGCACTCCAGCAGAACTTCCTGGCCATGGCGGCCCAGCTGCCCATGAGCATTCGGATCAACAGCCAAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263620.8
ENST00000590749.2
CDS CCA 72 bp CTGCCGTTGGTGCCCGTCAGGTTCACAGCAGAGTCCTaGCGGCTTTCGGAGGCTTGGCTGTTGATCCGAATG +
Preference number: 6 (lower is better)
Translates to: LPLVPVRFTAES*RLSEAWLLIRM
Trigger: CATTCGGATCAACAGCCAAGCCTCCGAAAGCCGCCAGGACTCTGCTGTGAACCTGACGGGCACCAACGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263620.8
ENST00000590749.2
CDS CCA 72 bp GCCTCTTCCTCACGCTGGGCTCCAGGGGACAGAGGCTaGCATCCGGCTCATTCACGCATTTGCAGAAACCTG +
Preference number: 6 (lower is better)
Translates to: ASSSRWAPGDRG*HPAHSRICRNL
Trigger: CAGGTTTCTGCAAATGCGTGAATGAGCCGGATGCCAGCCTCTGTCCCCTGGAGCCCAGCGTGAGGAAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585895.1
ENST00000592216.2
CDS CCA 72 bp CTGCCGTTGGTGCCCGTCAGGTTCACAGCAGAGTCCTaGCGGCTTTCGGAGGCTTTCTTGATCTTAGGGGCG +
Preference number: 6 (lower is better)
Translates to: LPLVPVRFTAES*RLSEAFLILGA
Trigger: CGCCCCTAAGATCAAGAAAGCCTCCGAAAGCCGCCAGGACTCTGCTGTGAACCTGACGGGCACCAACGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587532.5
CDS CAA 72 bp TTGATCTCCACCGACATGCTGATGCTGTTGCTGCCGTaGGTGCCCGTCAGGTTCACAGCAGAGTCCTGGCGG +
Preference number: 6 (lower is better)
Translates to: LISTDMLMLLLP*VPVRFTAESWR
Trigger: CCGCCAGGACTCTGCTGTGAACCTGACGGGCACCAACGGCAGCAACAGCATCAGCATGTCGGTGGAGATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263620.8
ENST00000587532.5
ENST00000590749.2
CDS CAA 90 bp ATGATGCCGTTGATCTCCACCGACATGCTGATGCTGTTGCTGCCGTaGGTGCCCGTCAGGTTCACAGCAGAGTCCTGGCGGCTTTCGGAG +
Preference number: 6 (lower is better)
Translates to: MMPLISTDMLMLLLP*VPVRFTAESWRLSE
Trigger: CTCCGAAAGCCGCCAGGACTCTGCTGTGAACCTGACGGGCACCAACGGCAGCAACAGCATCAGCATGTCGGTGGAGATCAACGGCATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263620.8
ENST00000587532.5
ENST00000590749.2
CDS CAA 90 bp CCTGTGTACATGATGCCGTTGATCTCCACCGACATGCTGATGCTGTaGCTGCCGTTGGTGCCCGTCAGGTTCACAGCAGAGTCCTGGCGG +
Preference number: 6 (lower is better)
Translates to: PVYMMPLISTDMLML*LPLVPVRFTAESWR
Trigger: CCGCCAGGACTCTGCTGTGAACCTGACGGGCACCAACGGCAGCAACAGCATCAGCATGTCGGTGGAGATCAACGGCATCATGTACACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263620.8
ENST00000587532.5
ENST00000590749.2
CDS TCA 72 bp GGGTGGGGAGTGATGCGGTTAAGGCAACGAGTTATTTaGGGTAGATGTGGAGGGTGTGGACAGCCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: GWGVMRLRQRVI*GRCGGCGQPRW
Trigger: CCAGCGGGGCTGTCCACACCCTCCACATCTACCTCAAATAACTCGTTGCCTTAACCGCATCACTCCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS TCA 72 bp GTGGACGACCCCCTCTGGGCTGAGCGTGGTACCGGGTaGACGATGGTATCCTCTCCATCAGTCTTGACTGTT +
Preference number: 6 (lower is better)
Translates to: VDDPLWAERGTG*TMVSSPSVLTV
Trigger: AACAGTCAAGACTGATGGAGAGGATACCATCGTTCACCCGGTACCACGCTCAGCCCAGAGGGGGTCGTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590749.2
CDS GCA 72 bp AAGTTCTGCTGGAGTGCACGTTGCATCAGCCGTTGCTaGTCATCGGCCACCAGGGCCATCTTCTTCTCCGGA +
Preference number: 6 (lower is better)
Translates to: KFCWSARCISRC*SSATRAIFFSG
Trigger: TCCGGAGAAGAAGATGGCCCTGGTGGCCGATGAGCAGCAACGGCTGATGCAACGTGCACTCCAGCAGAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS GCA 72 bp AGGAAGTTCTGCTGGAGTGCACGTTGCATCAGCCGTTaGTGCTCATCGGCCACCAGGGCCATCTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: RKFCWSARCISR*CSSATRAIFFS
Trigger: GGAGAAGAAGATGGCCCTGGTGGCCGATGAGCAGCAACGGCTGATGCAACGTGCACTCCAGCAGAACTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263620.8
CDS CCA 72 bp ATCTTGGATTATTGCTTCACAAGCAGGGTGGGGGAATaGGCGTTCCTGGCCTGTGATTGGCCAGCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: ILDYCFTSRVGE*AFLACDWPAGS
Trigger: GGAGCCCGCTGGCCAATCACAGGCCAGGAACGCCCATTCCCCCACCCTGCTTGTGAAGCAATAATCCAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS CAA 72 bp GTGGCCTCAGGGGTCCTACCTGTGTACATGATGCCGTaGATCTCCACCGACATGCTGATGCTGTTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: VASGVLPVYMMP*ISTDMLMLLLP
Trigger: CGGCAGCAACAGCATCAGCATGTCGGTGGAGATCAACGGCATCATGTACACAGGTAGGACCCCTGAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590749.2
CDS TCA 72 bp TCTAGGTATCCTCCCATCTCAGGCCAGACTGGAGATTaGGCGCCTGTTGTATACGGGCCCTGGGCTAACCCT +
Preference number: 6 (lower is better)
Translates to: SRYPPISGQTGD*APVVYGPWANP
Trigger: AGGGTTAGCCCAGGGCCCGTATACAACAGGCGCTCAATCTCCAGTCTGGCCTGAGATGGGAGGATACCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS TCA 72 bp GTACCGGGTGAACGATGGTATCCTCTCCATCAGTCTTaGCTGTTTGTCCTGCAAAGCCCCTGGCCGTGCCCT +
Preference number: 6 (lower is better)
Translates to: VPGERWYPLHQS*LFVLQSPWPCP
Trigger: AGGGCACGGCCAGGGGCTTTGCAGGACAAACAGTCAAGACTGATGGAGAGGATACCATCGTTCACCCGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590749.2
CDS CCA 72 bp CCCAGGAGATCTTGGATTATTGCTTCACAAGCAGGGTaGGGGAATGGGCGTTCCTGGCCTGTGATTGGCCAG +
Preference number: 6 (lower is better)
Translates to: PRRSWIIASQAG*GNGRSWPVIGQ
Trigger: CTGGCCAATCACAGGCCAGGAACGCCCATTCCCCCACCCTGCTTGTGAAGCAATAATCCAAGATCTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS CAA 72 bp ATGATGCCGTTGATCTCCACCGACATGCTGATGCTGTaGCTGCCGTTGGTGCCCGTCAGGTTCACAGCAGAG +
Preference number: 6 (lower is better)
Translates to: MMPLISTDMLML*LPLVPVRFTAE
Trigger: CTCTGCTGTGAACCTGACGGGCACCAACGGCAGCAACAGCATCAGCATGTCGGTGGAGATCAACGGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263620.8
ENST00000587532.5
ENST00000590749.2
CDS GCA 72 bp CGGGGCCACAGAGAAACACGCTGTGGCCAGACTGTCTaGCCCAGGAGATCTTGGATTATTGCTTCACAAGCA +
Preference number: 6 (lower is better)
Translates to: RGHRETRCGQTV*PRRSWIIASQA
Trigger: TGCTTGTGAAGCAATAATCCAAGATCTCCTGGGGCAGACAGTCTGGCCACAGCGTGTTTCTCTGTGGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592216.2
CDS CCA 72 bp TGTGAACCATCCAACGTCACACTGAATATGTATCTGTaGACGACCCCCTCTGGGCTGAGCGTGGTACCGGGT +
Preference number: 6 (lower is better)
Translates to: CEPSNVTLNMYL*TTPSGLSVVPG
Trigger: ACCCGGTACCACGCTCAGCCCAGAGGGGGTCGTCCACAGATACATATTCAGTGTGACGTTGGATGGTTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590749.2