RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARID2 (Homo sapiens)

Ensembl gene IDs: ENSG00000189079

Ensembl transcript IDs: ENST00000334344.11, ENST00000422737.6, ENST00000426776.5, ENST00000427628.5, ENST00000444670.5, ENST00000457135.1, ENST00000477947.1, ENST00000479608.5, ENST00000480128.1

Found 1100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTGTAAGTTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATaGTTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGG +
Preference number: 1 (lower is better)
Translates to: LVSLRALKAILGIPT*FQRCLLGSASLGRW
Trigger: CCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAACTTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR TCA 90 bp GACTATAAAGTAATGAGACGAGTTCTCAGGTGTGGGTTGGATTACTaGGTCTCATTAATATATAGTCACAATCCTGACTTGAGCTTGGAA +
Preference number: 1 (lower is better)
Translates to: DYKVMRRVLRCGLDY*VSLIYSHNPDLSLE
Trigger: TTCCAAGCTCAAGTCAGGATTGTGACTATATATTAATGAGACTCAGTAATCCAACCCACACCTGAGAACTCGTCTCATTACTTTATAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR CCA 90 bp AACCTACCAATAATGCTTCTAGGACACCACAGAATGTATTTCCAGTaGCTGCAGTGGCATGAAAGGTATTCATTCTATTCACAAATATTT +
Preference number: 1 (lower is better)
Translates to: NLPIMLLGHHRMYFQ*LQWHERYSFYSQIF
Trigger: AAATATTTGTGAATAGAATGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAGAAGCATTATTGGTAGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR TCA 90 bp AAACTGAGGCTTTTTCACTCTAAGAATCTGCCTCCAAATTCAAGCTaGAGATTTGGATACACTGTGATTCTGAATAAACAGTCAAGAAAC +
Preference number: 1 (lower is better)
Translates to: KLRLFHSKNLPPNSS*RFGYTVILNKQSRN
Trigger: GTTTCTTGACTGTTTATTCAGAATCACAGTGTATCCAAATCTTCAGCTTGAATTTGGAGGCAGATTCTTAGAGTGAAAAAGCCTCAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR GCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTGTCTGTTGGGCAGTaGCAGTCTTGGAAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSVSVGQ*QSWKVG
Trigger: GCCCACCTTCCAAGACTGGCACTGCCCAACAGACAC...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGCATTCCTTTGAGACATaGCAGGACAGCGCCAGGGAT +
Preference number: 2 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQHSFET*QDSARD
Trigger: ATCCCTGGCGCTGTCCTGCCATGTCTCAAAGGAATG...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTCTCAAACATTCCTTTaGGACATGGCAGGACAGCGC +
Preference number: 2 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSSQTFL*DMAGQR
Trigger: GCGCTGTCCTGCCATGTCTCAAAGGAATGTTTGAGA...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTATAGCTAGATATTGGTaGCCCCCTCTGAGATCGGGG +
Preference number: 2 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSIARYW*PPLRSG
Trigger: CCCCGATCTCAGAGGGGGCCACCAATATCTAGCTAT...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGACACAGCAGAAATGGTaGTTGGGAGGCCTTCCACAT +
Preference number: 2 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQTQQKW*LGGLPH
Trigger: ATGTGGAAGGCCTCCCAACCACCATTTCTGCTGTGT...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGGTGGCTGCAGTGGCATaGAAGGTATTCATTCTATTC +
Preference number: 2 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGVAAVA*KVFILF
Trigger: GAATAGAATGAATACCTTTCATGCCACTGCAGCCAC...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGATCCTGCAGATAAGCTaGTTGACAATCCCACAGCAG +
Preference number: 2 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQILQIS*LTIPQQ
Trigger: CTGCTGTGGGATTGTCAACCAGCTTATCTGCAGGAT...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTTCCATAGCTAGATATTaGTGGCCCCCTCTGAGATCG +
Preference number: 2 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSSIARY*WPPLRS
Trigger: CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGA...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTAGCAGAAATGGTGGTTaGGAGGCCTTCCACATTTTT +
Preference number: 2 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSSRNGG*EAFHIF
Trigger: AAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCT...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGATTGGTGGCCCCCTCTaGGATCGGGGGTATAGGTGT +
Preference number: 2 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLIGGPL*DRGYRC
Trigger: ACACCTATACCCCCGATCTCAGAGGGGGCCACCAAT...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTGATGGTACTGAATTCTaGTCATACCAGTTTCCATCA +
Preference number: 2 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSDGTEF*SYQFPS
Trigger: TGATGGAAACTGGTATGATCAGAATTCAGTACCATC...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTAATCAAATAGGTAGGTaGCCGTTATACCTTGCCTTC +
Preference number: 2 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSNQIGR*PLYLAF
Trigger: GAAGGCAAGGTATAACGGTCACCTACCTATTTGATT...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATATAGCTAGATATTGGTaGCCCCCTCTGAGATCGGGG +
Preference number: 2 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNIARYW*PPLRSG
Trigger: CCCCGATCTCAGAGGGGGCCACCAATATCTAGCTAT...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGGGCATTTGGCAAGGGTaGAGGAAGCTTCCATGTTAC +
Preference number: 2 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSGIWQG*RKLPCY
Trigger: GTAACATGGAAGCTTCCTCCACCCTTGCCAAATGCC...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457135.1
3UTR-3UTR GCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTTCACTCTAAGAATCTaGCTCCAAATTCAAGCTGAA +
Preference number: 2 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQFTLRI*LQIQAE
Trigger: TTCAGCTTGAATTTGGAGGCAGATTCTTAGAGTGAA...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTTCCAGTGGCTGCAGTaGCATGAAAGGTATTCATTC +
Preference number: 2 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGFQWLQ*HERYSF
Trigger: GAATGAATACCTTTCATGCCACTGCAGCCACTGGAA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACTCTCAAACATTCCTTTaGGACATGGCAGGACAGCGC +
Preference number: 2 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNSQTFL*DMAGQR
Trigger: GCGCTGTCCTGCCATGTCTCAAAGGAATGTTTGAGA...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR GCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTGTATTTCCAGTGGCTaGAGTGGCATGAAAGGTATT +
Preference number: 2 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGCISSG*SGMKGI
Trigger: AATACCTTTCATGCCACTGCAGCCACTGGAAATACA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGTCCATAGCTAGATATTaGTGGCCCCCTCTGAGATCG +
Preference number: 2 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLSIARY*WPPLRS
Trigger: CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGA...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCATTCCAGTGGCTGCAGTaGCATGAAAGGTATTCATTC +
Preference number: 2 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSFQWLQ*HERYSF
Trigger: GAATGAATACCTTTCATGCCACTGCAGCCACTGGAA...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGGCCAGTCTTGGAAGGTaGGCCAAGCATAAATTCCAC +
Preference number: 2 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLASLGR*AKHKFH
Trigger: GTGGAATTTATGCTTGGCCCACCTTCCAAGACTGGC...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGCTAGGGATACCCACATaGTTTCAGCGGTGTCTGTTG +
Preference number: 2 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRLGIPT*FQRCLL
Trigger: CAACAGACACCGCTGAAATCATGTGGGTATCCCTAG...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGATAGCTAGATATTGGTaGCCCCCTCTGAGATCGGGG +
Preference number: 2 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKIARYW*PPLRSG
Trigger: CCCCGATCTCAGAGGGGGCCACCAATATCTAGCTAT...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGTCCATAGCTAGATATTaGTGGCCCCCTCTGAGATCG +
Preference number: 2 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRSIARY*WPPLRS
Trigger: CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGA...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGGCCTTCCACATTTTTaGATGCTAATAGAACAGGCA +
Preference number: 2 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQGLPHF*MLIEQA
Trigger: TGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCC...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCACCCCCACTGTGTAAGTaGAATTATTTTTCACTGCAG +
Preference number: 2 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSPPLCK*NYFSLQ
Trigger: CTGCAGTGAAAAATAATTCCACTTACACAGTGGGGG...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457135.1
3UTR-3UTR TCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCACAATGTGGATGGTACTaGATTCTGATCATACCAGTT +
Preference number: 2 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSQCGWY*ILIIPV
Trigger: AACTGGTATGATCAGAATTCAGTACCATCCACATTG...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATTCTGTCCAAGCTCTaGGCTTGTACACGACAAACG +
Preference number: 2 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYILSKL*ACTRQT
Trigger: CGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAAT...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTGCCAGTCTTGGAAGGTaGGCCAAGCATAAATTCCAC +
Preference number: 2 (lower is better)
Translates to: YSRKARTTACNSMRWKNGASLGR*AKHKFH
Trigger: GTGGAATTTATGCTTGGCCCACCTTCCAAGACTGGC...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACGTTCATAAAGGCATTTaGCAAGGGTGGAGGAAGCTT +
Preference number: 2 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNVHKGI*QGWRKL
Trigger: AAGCTTCCTCCACCCTTGCCAAATGCCTTTATGAAC...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457135.1
3UTR-3UTR TCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTATTCTGTCCAAGCTCTaGGCTTGTACACGACAAACG +
Preference number: 2 (lower is better)
Translates to: YSRKARTTACNSMRWKNGILSKL*ACTRQT
Trigger: CGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAAT...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACACAGTATGTGAAATGTaGCTGACTTTGAGTCCCCCA +
Preference number: 2 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYTVCEM*LTLSPP
Trigger: TGGGGGACTCAAAGTCAGCCACATTTCACATACTGT...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTATCCTGCAGATAAGCTaGTTGACAATCCCACAGCAG +
Preference number: 2 (lower is better)
Translates to: YSRKARTTACNSMRWKNGILQIS*LTIPQQ
Trigger: CTGCTGTGGGATTGTCAACCAGCTTATCTGCAGGAT...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGTTCCAGTGGCTGCAGTaGCATGAAAGGTATTCATTC +
Preference number: 2 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRFQWLQ*HERYSF
Trigger: GAATGAATACCTTTCATGCCACTGCAGCCACTGGAA...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAGATGGTACTGAATTCTaGTCATACCAGTTTCCATCA +
Preference number: 2 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLDGTEF*SYQFPS
Trigger: TGATGGAAACTGGTATGATCAGAATTCAGTACCATC...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTGTGGCTGCAGTGGCATaGAAGGTATTCATTCTATTC +
Preference number: 2 (lower is better)
Translates to: YSRKARTTACNSMRWKNGVAAVA*KVFILF
Trigger: GAATAGAATGAATACCTTTCATGCCACTGCAGCCAC...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGCACCTTTTCATGAATaGGAGGGTTTTGCAGAACTT +
Preference number: 2 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRAPFHE*EGFAEL
Trigger: AAGTTCTGCAAAACCCTCTCATTCATGAAAAGGTGC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR GCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACTGTATTTCCAGTGGCTaGAGTGGCATGAAAGGTATT +
Preference number: 2 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYCISSG*SGMKGI
Trigger: AATACCTTTCATGCCACTGCAGCCACTGGAAATACA...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTACAGTATGTGAAATGTaGCTGACTTTGAGTCCCCCA +
Preference number: 2 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSTVCEM*LTLSPP
Trigger: TGGGGGACTCAAAGTCAGCCACATTTCACATACTGT...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTCCTCCAAATTCAAGCTaGAGATTTGGATACACTGTG +
Preference number: 2 (lower is better)
Translates to: YSRKARTTACNSMRWKNGPPNSS*RFGYTV
Trigger: CACAGTGTATCCAAATCTTCAGCTTGAATTTGGAGG...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR GCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTGTATTTCCAGTGGCTaGAGTGGCATGAAAGGTATT +
Preference number: 2 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKCISSG*SGMKGI
Trigger: AATACCTTTCATGCCACTGCAGCCACTGGAAATACA...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR GCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATCAGCATCAGTACCTTTaGAGAAGTATTTACACAAAT +
Preference number: 2 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNQHQYL*RSIYTN
Trigger: ATTTGTGTAAATACTTCTGCAAAGGTACTGATGCTG...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR CAA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTaGCAGAACTTATTGTGCAAAAGCACTTTAATTCCATTACACAGC +
Preference number: 2 (lower is better)
Translates to: KFLSSKEHLFMNERV*QNLLCKSTLIPLHS
Trigger: GCTGTGTAATGGAATTAAAGTGCTTTTGCACAATAAGTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR TCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGCAATGTGGATGGTACTaGATTCTGATCATACCAGTT +
Preference number: 2 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKQCGWY*ILIIPV
Trigger: AACTGGTATGATCAGAATTCAGTACCATCCACATTG...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGACAGTATGTGAAATGTaGCTGACTTTGAGTCCCCCA +
Preference number: 2 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVTVCEM*LTLSPP
Trigger: TGGGGGACTCAAAGTCAGCCACATTTCACATACTGT...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGTTCAAGCTGAAGATTTaGATACACTGTGATTCTGAA +
Preference number: 2 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLFKLKI*IHCDSE
Trigger: TTCAGAATCACAGTGTATCCAAATCTTCAGCTTGAA...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGTGCAATTCAATGAGGTaGAAGAATGGTGAATATGAA +
Preference number: 2 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLCNSMR*KNGEYE
Trigger: TTCATATTCACCATTCTTCCACCTCATTGAATTGCA...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR GCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGCAGCATCAGTACCTTTaGAGAAGTATTTACACAAAT +
Preference number: 2 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKQHQYL*RSIYTN
Trigger: ATTTGTGTAAATACTTCTGCAAAGGTACTGATGCTG...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CCA 90 bp ACTTTGGCTACAGAAAACATATTACTCACCTGCGACCACATTCTGAATATTTACGATGTGTTTAGTTATTaGTCCCTCTTTTTCATCCTT +
Preference number: 2 (lower is better)
Translates to: TLATENILLTCDHILNIYDVFSY*SLFFIL
Trigger: AAGGATGAAAAAGAGGGACCAATAACTAAACACATC...GTAAATATTCAGAATGTGGTCGCAGGTGAGTAATATGTTTTCTGTAGCCAAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477947.1
3UTR TCA 72 bp TTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATaGTTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTT +
Preference number: 3 (lower is better)
Translates to: LRALKAILGIPT*FQRCLLGSASL
Trigger: AAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGGAAATGTGGCTGACTTaGAGTCCCCCACTGTGTAAG +
Preference number: 3 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGEMWLT*SPPLCK
Trigger: CTTACACAGTGGGGGACTCAAAGTCAGCCACATTTC...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTCAGGTGCTTGTAAGTTaGAGGGCTCTGAAGGCCATC +
Preference number: 3 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSQVLVS*RALKAI
Trigger: GATGGCCTTCAGAGCCCTCAAACTTACAAGCACCTG...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGGGTGACCGTTATACCTaGCCTTCAGCTGAATTTAGA +
Preference number: 3 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGGDRYT*PSAEFR
Trigger: TCTAAATTCAGCTGAAGGCAAGGTATAACGGTCACC...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGTGGGCAGTGCCAGTCTaGGAAGGTGGGCCAAGCATA +
Preference number: 3 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLWAVPV*EGGPSI
Trigger: TATGCTTGGCCCACCTTCCAAGACTGGCACTGCCCA...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCGTCCAAGCTCTGAGCTaGTACACGACAAACGTTTAC +
Preference number: 3 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGVQALS*YTTNVY
Trigger: GTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGAC...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGTTTCAGCGGTGTCTGTaGGGCAGTGCCAGTCTTGGA +
Preference number: 3 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLFQRCL*GSASLG
Trigger: TCCAAGACTGGCACTGCCCAACAGACACCGCTGAAA...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTTGGGCAGTGCCAGTCTaGGAAGGTGGGCCAAGCATA +
Preference number: 3 (lower is better)
Translates to: YSRKARTTACNSMRWKNGWAVPV*EGGPSI
Trigger: TATGCTTGGCCCACCTTCCAAGACTGGCACTGCCCA...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGGTGCTTGTAAGTTaGAGGGCTCTGAAGGCCATC +
Preference number: 3 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLQVLVS*RALKAI
Trigger: GATGGCCTTCAGAGCCCTCAAACTTACAAGCACCTG...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACGAAATGTGGCTGACTTaGAGTCCCCCACTGTGTAAG +
Preference number: 3 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNEMWLT*SPPLCK
Trigger: CTTACACAGTGGGGGACTCAAAGTCAGCCACATTTC...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR CCA 72 bp GACTTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTaGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAAT +
Preference number: 3 (lower is better)
Translates to: DLVLSSVTVCEM*LTLSPPLCKWN
Trigger: ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTGAAATGTGGCTGACTTaGAGTCCCCCACTGTGTAAG +
Preference number: 3 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSEMWLT*SPPLCK
Trigger: CTTACACAGTGGGGGACTCAAAGTCAGCCACATTTC...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTCTGCAGATAAGCTGGTaGACAATCCCACAGCAGTTC +
Preference number: 3 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSLQISW*TIPQQF
Trigger: GAACTGCTGTGGGATTGTCAACCAGCTTATCTGCAG...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTCTGCAGATAAGCTGGTaGACAATCCCACAGCAGTTC +
Preference number: 3 (lower is better)
Translates to: YSRKARTTACNSMRWKNGLQISW*TIPQQF
Trigger: GAACTGCTGTGGGATTGTCAACCAGCTTATCTGCAG...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTTCCACAAAACTGTTTaGACTTTACAGCATCAGTAC +
Preference number: 3 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGFHKTV*TLQHQY
Trigger: GTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGTCCAAGCTCTGAGCTaGTACACGACAAACGTTTAC +
Preference number: 3 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRVQALS*YTTNVY
Trigger: GTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGAC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGTTCCACAAAACTGTTTaGACTTTACAGCATCAGTAC +
Preference number: 3 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQFHKTV*TLQHQY
Trigger: GTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAA...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR TCA 72 bp TCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATaGATGAGAGGGTTTTGCAGAACTTATTGTGCAAAA +
Preference number: 3 (lower is better)
Translates to: SASFCLARSTFS*MRGFCRTYCAK
Trigger: TTTTGCACAATAAGTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR TCA 72 bp GTAATGAGACGAGTTCTCAGGTGTGGGTTGGATTACTaGGTCTCATTAATATATAGTCACAATCCTGACTTG +
Preference number: 3 (lower is better)
Translates to: VMRRVLRCGLDY*VSLIYSHNPDL
Trigger: CAAGTCAGGATTGTGACTATATATTAATGAGACTCAGTAATCCAACCCACACCTGAGAACTCGTCTCATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR CCA 72 bp ATAATGCTTCTAGGACACCACAGAATGTATTTCCAGTaGCTGCAGTGGCATGAAAGGTATTCATTCTATTCA +
Preference number: 3 (lower is better)
Translates to: IMLLGHHRMYFQ*LQWHERYSFYS
Trigger: TGAATAGAATGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAGAAGCATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR-3UTR CAA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTTTCCACAAAACTGTTTaGACTTTACAGCATCAGTAC +
Preference number: 3 (lower is better)
Translates to: YSRKARTTACNSMRWKNGFHKTV*TLQHQY
Trigger: GTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAA...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR TCA 72 bp TTCCATGTATATTCCAATGTGGATGGTACTGAATTCTaGTCATACCAGTTTCCATCAGGATTTATCAGATCT +
Preference number: 3 (lower is better)
Translates to: FHVYSNVDGTEF*SYQFPSGFIRS
Trigger: AGATCTGATAAATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATACATGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
3UTR TCA 72 bp CTTTTTCACTCTAAGAATCTGCCTCCAAATTCAAGCTaGAGATTTGGATACACTGTGATTCTGAATAAACAG +
Preference number: 3 (lower is better)
Translates to: LFHSKNLPPNSS*RFGYTVILNKQ
Trigger: CTGTTTATTCAGAATCACAGTGTATCCAAATCTTCAGCTTGAATTTGGAGGCAGATTCTTAGAGTGAAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGCTGAAACCCTACCCTTaGGGCTTGTGGACTTGGGAC +
Preference number: 4 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGLKPYP*GLWTWD
Trigger: GTCCCAAGTCCACAAGCCTCAAGGGTAGGGTTTCAG...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTTCACCAGAGGCAGGCTaGCCAACTCCTGCATTCGAC +
Preference number: 4 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSSPEAG*PTPAFD
Trigger: GTCGAATGCAGGAGTTGGTCAGCCTGCCTCTGGTGA...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTCTGCTGTGGTGGAACTaGCGCAGCTCGTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSLLWWN*RSSSRK
Trigger: TTTCCTGGACGAGCTGCGGCAGTTCCACCACAGCAG...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR TCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGTAACAGGAGTGCCTaGAGGGATCTGTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQCNRSA*RDLSWY
Trigger: GTACCAGGACAGATCCCTTCAGGCACTCCTGTTACA...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTTGTCCAGCAGGAGATaGTTGAGTGGCTGGAAGCGT +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQLSSRR*LSGWKR
Trigger: ACGCTTCCAGCCACTCAAGCATCTCCTGCTGGACAA...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGCCTTTGTATCCCCATTaGTGGTGTTTGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGPLYPH*WCLWLL
Trigger: GAGGAGCCACAAACACCAGCAATGGGGATACAAAGG...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGCAACCATTGTTGCGCTaGAGCCAGCATTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQQPLLR*SQHCWG
Trigger: ACCCCAACAATGCTGGCTGCAGCGCAACAATGGTTG...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGCCTCAGAGCCATAAGTaGAGCACTGGGATGATTCAC +
Preference number: 4 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGPQSHK*STGMIH
Trigger: GTGAATCATCCCAGTGCTGCACTTATGGCTCTGAGG...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGAGGAAGCTGTGGCTTTaGATTGCCTGGTGGTACCTC +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQRKLWL*IAWWYL
Trigger: GAGGTACCACCAGGCAATCCAAAGCCACAGCTTCCT...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR CCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTCACTATTCCTGGAGGTaGAGCAACATGCTGCGCTAC +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSHYSWR*SNMLRY
Trigger: GTAGCGCAGCATGTTGCTCCACCTCCAGGAATAGTG...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTTCAGCGGTGTCTGTTaGGCAGTGCCAGTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSFSGVC*AVPVLE
Trigger: TTCCAAGACTGGCACTGCCCAACAGACACCGCTGAA...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTCATCTCCCATTTCCGTaGGCATGTATAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSHLPFP*ACIAPR
Trigger: TCGAGGTGCTATACATGCTCACGGAAATGGGAGATG...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGGTTGGGGTGATGTGGTaGTTAACTGTTGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQVGVMW*LTVDPV
Trigger: CACAGGGTCAACAGTTAATCACCACATCACCCCAAC...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGGTTGCTGGGCTATTTaGGATCAGTGGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSGCWAI*DQWTWQ
Trigger: TTGCCAGGTCCACTGATCTCAAATAGCCCAGCAACC...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTTTGTGCTCTAGGAGTTaGGCTTGTGCCCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSLCSRS*ACAPYS
Trigger: ACTGTAGGGGGCACAAGCTCAACTCCTAGAGCACAA...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTCCTTTGTATCCCCATTaGTGGTGTTTGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSPLYPH*WCLWLL
Trigger: GAGGAGCCACAAACACCAGCAATGGGGATACAAAGG...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCGTGTCTGTTGGGCAGTaGCAGTCTTGGAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGVSVGQ*QSWKVG
Trigger: GCCCACCTTCCAAGACTGGCACTGCCCAACAGACAC...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTTTAGCTACAGTGCTTaGATCTGCTCCTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQFSYSA*ICSCWH
Trigger: GTGCCAGCAGGAGCAGATCCAAGCACTGTAGCTAAA...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTCCATAGCTAGATATTaGTGGCCCCCTCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSSIARY*WPPLRS
Trigger: CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGA...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTATGGTTTGTGATCCATaGGGGATTCCTGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSMVCDP*GIPAGE
Trigger: TTCACCTGCAGGAATCCCTCATGGATCACAAACCAT...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGGTGATGTGGTaGTTAACTGTTGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSVGVMW*LTVDPV
Trigger: CACAGGGTCAACAGTTAATCACCACATCACCCCAAC...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTTTGGTGCAATGTTCTaGAACCCTACCCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSFGAMF*NPTLEA
Trigger: AGCCTCAAGGGTAGGGTTTCAGAACATTGCACCAAA...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGAGGAGGTGGTCCCTGTaGTTGAGGGGTAGAGGACGA +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLRRWSL*LRGRGR
Trigger: TCGTCCTCTACCCCTCAATCACAGGGACCACCTCCT...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGCCAACCAATAGCTGCTaGGCTGGAGTTTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQPTNSC*AGVCPC
Trigger: GCAGGGGCAAACTCCAGCTCAGCAGCTATTGGTTGG...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGATTGGTGGCCCCCTCTaGGATCGGGGGTATAGGTGT +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSIGGPL*DRGYRC
Trigger: ACACCTATACCCCCGATCTCAGAGGGGGCCACCAAT...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAGCTGGAGTTTGCCCCTaGACTCCAAAACCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSAGVCP*TPKPAA
Trigger: AGCCGCAGGTTTTGGAGTGCAGGGGCAAACTCCAGC...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGAGCAATGAGCTGAGTTaGATTTCCCTGACTCACAGT +
Preference number: 4 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGSNELS*ISLTHS
Trigger: ACTGTGAGTCAGGGAAATGCAACTCAGCTCATTGCT...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGGCTCATGGTAATTCCTaGTGGAGCAATGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQAHGNS*WSNELS
Trigger: ACTCAGCTCATTGCTCCAGCAGGAATTACCATGAGC...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGAAGCCTCCTGTATACTaGTCACAGATGAACCACCCA +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQKPPVY*SQMNHP
Trigger: TGGGTGGTTCATCTGTGAGCAGTATACAGGAGGCTT...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGGTGTCTGTTGGGCAGTaGCAGTCTTGGAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLVSVGQ*QSWKVG
Trigger: GCCCACCTTCCAAGACTGGCACTGCCCAACAGACAC...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGGACCCTCTGCTGTGGTaGAACTGCCGCAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLDPLLW*NCRSSS
Trigger: GGACGAGCTGCGGCAGTTCCACCACAGCAGAGGGTC...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR CCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGCTTTGGATTGCCTaGTGGTACCTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSWLWIA*WYLIII
Trigger: GATGATGATGAGGTACCACCAGGCAATCCAAAGCCA...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR CCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTAACTGCTCTGGAAGCTaGGGCAGATGCTACATGAGT +
Preference number: 4 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSNCSGS*GRCYMS
Trigger: ACTCATGTAGCATCTGCCCCAGCTTCCAGAGCAGTT...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTAGGAATCTGTGGAGCTaGGAGAATAAGCTTACCACC +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSRNLWS*ENKLTT
Trigger: GGTGGTAAGCTTATTCTCCCAGCTCCACAGATTCCT...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCACATTGCTGGTGTTTGTaGCTCCTCGTCGGCAGGACG +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSHCWCL*LLVGRT
Trigger: CGTCCTGCCGACGAGGAGCCACAAACACCAGCAATG...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGGTTCATAAAGGCATTTaGCAAGGGTGGAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGVHKGI*QGWRKL
Trigger: AAGCTTCCTCCACCCTTGCCAAATGCCTTTATGAAC...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGCCAGTCTTGGAAGGTaGGCCAAGCATAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSASLGR*AKHKFH
Trigger: GTGGAATTTATGCTTGGCCCACCTTCCAAGACTGGC...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAGGGATTCCTGCAGGTaGAGGAGCAGGAGATACATC +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGRDSCR*RSRRYI
Trigger: GATGTATCTCCTGCTCCTTCACCTGCAGGAATCCCT...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGTTGCAGTCAGATTTaGAGATTGGTTGGCAACAGG +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQCCSQI*RLVGNR
Trigger: CCTGTTGCCAACCAATCTTCAAATCTGACTGCAACA...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGCTGAAACCCTACCCTTaGGGCTTGTGGACTTGGGAC +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLLKPYP*GLWTWD
Trigger: GTCCCAAGTCCACAAGCCTCAAGGGTAGGGTTTCAG...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACGGTGGTCCCTGTGATTaGGGGGTAGAGGACGACGAC +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNGGPCD*GVEDDD
Trigger: GTCGTCGTCCTCTACCCCTCAATCACAGGGACCACC...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGAGTTTGTACTCCCCCTaGGGGTGGCATTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQSLYSP*GWHCTW
Trigger: CCAAGTGCAATGCCACCCTCAGGGGGAGTACAAACT...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGCCAGCAGGAGATGCTTaGGTGGCTGGAAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQPAGDA*VAGSVC
Trigger: ACAAACGCTTCCAGCCACTCAAGCATCTCCTGCTGG...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGGGAACTGCTATGATTTaGTGTCCCTGTATAACAGAG +
Preference number: 4 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGGTAMI*CPCITE
Trigger: CTCTGTTATACAGGGACATCAAATCATAGCAGTTCC...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGCTGAATGGAGAAGGCTaGGAACTGTTAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLLNGEG*ELLGWP
Trigger: GGGCCAGCCTAACAGTTCTCAGCCTTCTCCATTCAG...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTTGTGCTCTAGGAGTTaGGCTTGTGCCCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGLCSRS*ACAPYS
Trigger: ACTGTAGGGGGCACAAGCTCAACTCCTAGAGCACAA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGGCACCTTTTCATGAATaGGAGGGTTTTGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGAPFHE*EGFAEL
Trigger: AAGTTCTGCAAAACCCTCTCATTCATGAAAAGGTGC...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTACAGGTACGATTAGCTaGCAAGAGCTTAACATTGCC +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSTGTIS*QELNIA
Trigger: GGCAATGTTAAGCTCTTGGCAGCTAATCGTACCTGT...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR GCA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGGAATGTTGCTGCTGTTaGTGCCTTTTCACAGATAAC +
Preference number: 4 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGECCCC*CLFTDN
Trigger: GTTATCTGTGAAAAGGCAGCAACAGCAGCAACATTC...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTCCTCCATGTTCAGTTaGTGCATGGTAGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSSSMFS*CMVENL
Trigger: CAGGTTTTCTACCATGCAGCAACTGAACATGGAGGA...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTGGCGACCCTCTGCTGTaGTGGAACTGCCGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGGDPLL*WNCRSS
Trigger: CGAGCTGCGGCAGTTCCACCACAGCAGAGGGTCGCC...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR CCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTACGCTTTGTTGGGTTaGCTGCTGTGGTTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSYALLG*LLWLLN
Trigger: ATTCAACAACCACAGCAGCCAACCCAACAAAGCGTA...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTTGGCACAACTGTTATaGTTACCTGGTTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQLAQLL*LPGCQK
Trigger: CTTCTGGCAACCAGGTAACCATAACAGTTGTGCCAA...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGGATAGGGCAGGAGAATaGGATACTTTTGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQDRAGE*DTFDPE
Trigger: CTCAGGATCAAAAGTATCCCATTCTCCTGCCCTATC...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTTCCAGTGGCTGCAGTaGCATGAAAGGTATTCATTC +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQFQWLQ*HERYSF
Trigger: GAATGAATACCTTTCATGCCACTGCAGCCACTGGAA...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTCCAAATCCATTCTCCTaGTGTACCTTCATGAGACTT +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSPNPFS*CTFMRL
Trigger: AAGTCTCATGAAGGTACATCAGGAGAATGGATTTGG...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR TCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATGGGGCAGATGCTACATaGGTCTGGGTTTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNGADAT*VWVWTC
Trigger: GCAAGTCCAAACCCAGACTCATGTAGCATCTGCCCC...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGTGTAACAGGAGTGCCTaGAGGGATCTGTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSCNRSA*RDLSWY
Trigger: GTACCAGGACAGATCCCTTCAGGCACTCCTGTTACA...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACAGGAGGTGGTCCCTGTaGTTGAGGGGTAGAGGACGA +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNRRWSL*LRGRGR
Trigger: TCGTCCTCTACCCCTCAATCACAGGGACCACCTCCT...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTTCACAGATAACATTTaGCTGACAGTAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSFTDNI*LTVGGG
Trigger: ACCACCTCCTACTGTCAGTCAAATGTTATCTGTGAA...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCACTTACCACCTGGTGTTaGAGGACCACGTTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSLTTWC*RTTFRK
Trigger: CTTCCGAAACGTGGTCCTTCAACACCAGGTGGTAAG...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACCCAACCAATAGCTGCTaGGCTGGAGTTTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNPTNSC*AGVCPC
Trigger: GCAGGGGCAAACTCCAGCTCAGCAGCTATTGGTTGG...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAGCACTTGGGACCAACTaGACATTTTGCTGCCCAACC +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSALGTN*TFCCPT
Trigger: GGTTGGGCAGCAAAATGTTCAGTTGGTCCCAAGTGC...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGTTGTGCTCTAGGAGTTaGGCTTGTGCCCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSLCSRS*ACAPYS
Trigger: ACTGTAGGGGGCACAAGCTCAACTCCTAGAGCACAA...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGGGAAGCTGGGGCAGATaGTACATGAGTCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLGSWGR*YMSLGL
Trigger: CAAACCCAGACTCATGTAGCATCTGCCCCAGCTTCC...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGGTATGTTCTGTACTCTaGCAAACATATGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGVCSVL*QTYDSV
Trigger: CACAGAGTCATATGTTTGGCAGAGTACAGAACATAC...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATCTGCACTCCAAAACCTaGGGCTTGGTTACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNLHSKT*GLVTGH
Trigger: GTGGCCAGTAACCAAGCCGCAGGTTTTGGAGTGCAG...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGTACAGTGCTTGGATCTaGTCCTGCTGGCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQYSAWI*SCWHSN
Trigger: GTTGCTGTGCCAGCAGGAGCAGATCCAAGCACTGTA...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGTACAGTGCTTGGATCTaGTCCTGCTGGCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSYSAWI*SCWHSN
Trigger: GTTGCTGTGCCAGCAGGAGCAGATCCAAGCACTGTA...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGCTGTTAGGCTGGCCCTaGACTTGTACAGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLLLGWP*TCTAGE
Trigger: TTCACCAGCTGTACAAGTGCAGGGCCAGCCTAACAG...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTACAGGAACTCCTGTCTaGGGTATGGAATTCTGGATA +
Preference number: 4 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSTGTPV*GMEFWI
Trigger: TATCCAGAATTCCATACCCCAGACAGGAGTTCCTGT...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTTGGGTTGGCTGCTGTaGTTGTTGAATAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGLGWLL*LLNRLL
Trigger: CAGCAGCCTATTCAACAACCACAGCAGCCAACCCAA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGGAACAATTTGGTGAATaGCTGGTGCATAAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGEQFGE*LVHKFD
Trigger: GTCAAACTTATGCACCAGCCATTCACCAAATTGTTC...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGAAGTCCCTTGGAAAATaGTTGCTGGGCTATTTGAGA +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQKSLGK*LLGYLR
Trigger: TCTCAAATAGCCCAGCAACCATTTTCCAAGGGACTT...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTACATTGCTGGTGTTTGTaGCTCCTCGTCGGCAGGACG +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLHCWCL*LLVGRT
Trigger: CGTCCTGCCGACGAGGAGCCACAAACACCAGCAATG...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGCCCCCACTGTGTAAGTaGAATTATTTTTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQPPLCK*NYFSLQ
Trigger: CTGCAGTGAAAAATAATTCCACTTACACAGTGGGGG...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGATAGCTAGATATTGGTaGCCCCCTCTGAGATCGGGG +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLIARYW*PPLRSG
Trigger: CCCCGATCTCAGAGGGGGCCACCAATATCTAGCTAT...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTCCATAGCTAGATATTaGTGGCCCCCTCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGSIARY*WPPLRS
Trigger: CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGCATTCCTTTGAGACATaGCAGGACAGCGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSHSFET*QDSARD
Trigger: ATCCCTGGCGCTGTCCTGCCATGTCTCAAAGGAATG...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAGGGGCAGATGCTACATaGGTCTGGGTTTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLGADAT*VWVWTC
Trigger: GCAAGTCCAAACCCAGACTCATGTAGCATCTGCCCC...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTGTTGCTGGTGGGTATaGGGTGAAGGATTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGCCWWV*GEGFCG
Trigger: TCCACAAAATCCTTCACCTCATACCCACCAGCAACA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATGGCTGCTGTGGTTGTTaGATAGGCTGCTGTACCACT +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNGCCGC*IGCCTT
Trigger: AGTGGTACAGCAGCCTATTCAACAACCACAGCAGCC...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTGGTGGTCCCTGTGATTaGGGGGTAGAGGACGACGAC +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSGGPCD*GVEDDD
Trigger: GTCGTCGTCCTCTACCCCTCAATCACAGGGACCACC...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGGTGGTCCCTGTGATTaGGGGGTAGAGGACGACGAC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNGGPCD*GVEDDD
Trigger: GTCGTCGTCCTCTACCCCTCAATCACAGGGACCACC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATCTTACCACCTGGTGTTaGAGGACCACGTTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNLTTWC*RTTFRK
Trigger: CTTCCGAAACGTGGTCCTTCAACACCAGGTGGTAAG...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGGGTTGTAGAATGTGGTaGGACAACTACACTTGGGCG +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLGCRMW*DNYTWA
Trigger: CGCCCAAGTGTAGTTGTCTCACCACATTCTACAACC...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACCTGAATGGAGAAGGCTaGGAACTGTTAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNLNGEG*ELLGWP
Trigger: GGGCCAGCCTAACAGTTCTCAGCCTTCTCCATTCAG...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGATTGGTGGCCCCCTCTaGGATCGGGGGTATAGGTGT +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRIGGPL*DRGYRC
Trigger: ACACCTATACCCCCGATCTCAGAGGGGGCCACCAAT...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTCTAAGTGGGAAGCCATaGTCAGTTTCATTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSLSGKP*SVSLGQ
Trigger: TTGACCTAATGAAACTGATCATGGCTTCCCACTTAG...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAGCTGTGGCTTTGGATTaGCTGGTGGTACCTCATCAT +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSAVALD*LVVPHH
Trigger: ATGATGAGGTACCACCAGGCAATCCAAAGCCACAGC...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR GCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGATGCTGCGCTACAACTaGTCTGGAAGCTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLMLRYN*SGSWGR
Trigger: TCTGCCCCAGCTTCCAGAGCAGTTGTAGCGCAGCAT...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGGGAGGTGGAGCAACATaGTGCGCTACAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLGGGAT*CATTAL
Trigger: CAGAGCAGTTGTAGCGCAGCATGTTGCTCCACCTCC...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAAGCCTCCTGTATACTaGTCACAGATGAACCACCCA +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGKPPVY*SQMNHP
Trigger: TGGGTGGTTCATCTGTGAGCAGTATACAGGAGGCTT...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGTTTATTTGGAATTCCTaGGACTGTTTCCCTATCAGT +
Preference number: 4 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGFIWNS*DCFPIS
Trigger: ACTGATAGGGAAACAGTCGCAGGAATTCCAAATAAA...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGCACAGCAACCATTGTTaGGCTGCAGCCAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSHSNHC*AAASIV
Trigger: AACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTG...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATGCTTGGATCTGCTCCTaGTGGCACAGCAACCATTGT +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNAWICS*WHSNHC
Trigger: ACAATGGTTGCTGTGCCAGCAGGAGCAGATCCAAGC...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCAGCTTGGATCTGCTCCTaGTGGCACAGCAACCATTGT +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPAWICS*WHSNHC
Trigger: ACAATGGTTGCTGTGCCAGCAGGAGCAGATCCAAGC...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGCACTTTTTACAAGACTaGCACAGACACATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQHFLQD*HRHMKF
Trigger: GAACTTCATGTGTCTGTGGCAGTCTTGTAAAAAGTG...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGAACTGCTCTGGAAGCTaGGGCAGATGCTACATGAGT +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQNCSGS*GRCYMS
Trigger: ACTCATGTAGCATCTGCCCCAGCTTCCAGAGCAGTT...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCACCTGCCCATTGCTACTaGAATCCTCCACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSPAHCY*NPPLSS
Trigger: TGAAGAGAGTGGAGGATTCCAGTAGCAATGGGCAGG...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCTGCGGCTTGGTTACTaGCCACCTGATAGACCACCT +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLLRLGY*PPDRPP
Trigger: AGGTGGTCTATCAGGTGGCCAGTAACCAAGCCGCAG...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTTTATCACCTTTGAATaGGGGAGTAGCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSFITFE*GSSSST
Trigger: TGTACTACTGCTACTCCCCCATTCAAAGGTGATAAA...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATTGGATCTGCTCCTGCTaGCACAGCAACCATTGTTGC +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNWICSC*HSNHCC
Trigger: GCAACAATGGTTGCTGTGCCAGCAGGAGCAGATCCA...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTTTAGCTACAGTGCTTaGATCTGCTCCTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLFSYSA*ICSCWH
Trigger: GTGCCAGCAGGAGCAGATCCAAGCACTGTAGCTAAA...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGGCATTTGGCAAGGGTaGAGGAAGCTTCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQGIWQG*RKLPCY
Trigger: GTAACATGGAAGCTTCCTCCACCCTTGCCAAATGCC...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCATCCTGCAGATAAGCTaGTTGACAATCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGILQIS*LTIPQQ
Trigger: CTGCTGTGGGATTGTCAACCAGCTTATCTGCAGGAT...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATCATTCCTTTGAGACATaGCAGGACAGCGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNHSFET*QDSARD
Trigger: ATCCCTGGCGCTGTCCTGCCATGTCTCAAAGGAATG...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAGCCAGTCTTGGAAGGTaGGCCAAGCATAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSASLGR*AKHKFH
Trigger: GTGGAATTTATGCTTGGCCCACCTTCCAAGACTGGC...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCCAGTCTTGGAAGGTaGGCCAAGCATAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQASLGR*AKHKFH
Trigger: GTGGAATTTATGCTTGGCCCACCTTCCAAGACTGGC...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAACTTGGGTGTTCAATaGGTTTTACCGCAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGNLGVQ*VLPQLV
Trigger: CACTAGCTGCGGTAAAACTCATTGAACACCCAAGTT...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACAGGGATTCCTGCAGGTaGAGGAGCAGGAGATACATC +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNRDSCR*RSRRYI
Trigger: GATGTATCTCCTGCTCCTTCACCTGCAGGAATCCCT...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGATTTTGTGGAATTCTTaGAACAGTTTGTGCCACAGT +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQILWNS*NSLCHS
Trigger: ACTGTGGCACAAACTGTTTCAAGAATTCCACAAAAT...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTGTGGGACAGCTTGTTaGATTACTGTAACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGCGTAC*ITVTGV
Trigger: CACTCCTGTTACAGTAATTCAACAAGCTGTCCCACA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGACTCTGCCAAACATATaGCTCTGTGGGACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLTLPNI*LCGTAC
Trigger: ACAAGCTGTCCCACAGAGTCATATGTTTGGCAGAGT...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGCCAGCTGATGTCTGTTaGGATGAAGTTTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQPADVC*DEVCTG
Trigger: ACCTGTGCAAACTTCATCTCAACAGACATCAGCTGG...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTTGTCCTGTAGCTACCTaGAAATTCTGTACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSCPVAT*KFCTEV
Trigger: AACTTCAGTACAGAATTTTCAGGTAGCTACAGGACA...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGCTGTACCACTGTAGATaGAACTTGCTGAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSLYHCR*NLLRRE
Trigger: CTCCCTTCTCAGCAAGTTTCATCTACAGTGGTACAG...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACGGCTGCTGTGGTTGTTaGATAGGCTGCTGTACCACT +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNGCCGC*IGCCTT
Trigger: AGTGGTACAGCAGCCTATTCAACAACCACAGCAGCC...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAGGAGGTGGTCCCTGTaGTTGAGGGGTAGAGGACGA +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNRRWSL*LRGRGR
Trigger: TCGTCCTCTACCCCTCAATCACAGGGACCACCTCCT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTCACCAGAGGCAGGCTaGCCAACTCCTGCATTCGAC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNSPEAG*PTPAFD
Trigger: GTCGAATGCAGGAGTTGGTCAGCCTGCCTCTGGTGA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTCACCAGAGGCAGGCTaGCCAACTCCTGCATTCGAC +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKSPEAG*PTPAFD
Trigger: GTCGAATGCAGGAGTTGGTCAGCCTGCCTCTGGTGA...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACCAACCAATAGCTGCTaGGCTGGAGTTTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQPTNSC*AGVCPC
Trigger: GCAGGGGCAAACTCCAGCTCAGCAGCTATTGGTTGG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGAGTTTGTACTCCCCCTaGGGGTGGCATTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRSLYSP*GWHCTW
Trigger: CCAAGTGCAATGCCACCCTCAGGGGGAGTACAAACT...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATGGTTGTAGAATGTGGTaGGACAACTACACTTGGGCG +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNGCRMW*DNYTWA
Trigger: CGCCCAAGTGTAGTTGTCTCACCACATTCTACAACC...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATCACTTGTACAGCTGGTaGAGGTGGCATAGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNHLYSW*RWHRSV
Trigger: AACACTCCTATGCCACCTTCACCAGCTGTACAAGTG...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTATTGGTGGCCCCCTCTaGGATCGGGGGTATAGGTGT +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGIGGPL*DRGYRC
Trigger: ACACCTATACCCCCGATCTCAGAGGGGGCCACCAAT...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCATCTCAAACATTCCTTTaGGACATGGCAGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPSQTFL*DMAGQR
Trigger: GCGCTGTCCTGCCATGTCTCAAAGGAATGTTTGAGA...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATTCTCAAACATTCCTTTaGGACATGGCAGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNSQTFL*DMAGQR
Trigger: GCGCTGTCCTGCCATGTCTCAAAGGAATGTTTGAGA...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGGGAAGCTGGGGCAGATaGTACATGAGTCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLGSWGR*YMSLGL
Trigger: CAAACCCAGACTCATGTAGCATCTGCCCCAGCTTCC...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGGGTGGAGCAACATGCTaGGCTACAACTGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLGGATC*ATTALE
Trigger: TTCCAGAGCAGTTGTAGCGCAGCATGTTGCTCCACC...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATAGGCTGACCAACTCCTaGATTCGACTGTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNRLTNS*IRLLRL
Trigger: CAACCTCAACAGTCGAATGCAGGAGTTGGTCAGCCT...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAAGGGCTAGGAGCTCTTaGATTATTAGGGGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSRARSS*IIRGRN
Trigger: ATTCCTCCCCCTAATAATGCAAGAGCTCCTAGCCCT...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACCTGCACTCCAAAACCTaGGGCTTGGTTACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYLHSKT*GLVTGH
Trigger: GTGGCCAGTAACCAAGCCGCAGGTTTTGGAGTGCAG...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGCTGGAGTTTGCCCCTaGACTCCAAAACCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQAGVCP*TPKPAA
Trigger: AGCCGCAGGTTTTGGAGTGCAGGGGCAAACTCCAGC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAAGTCCAACTCCTGTCTaGGTTCCGCTCATGGTAATT +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSSPTPV*VPLMVI
Trigger: AATTACCATGAGCGGAACGCAGACAGGAGTTGGACT...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTATTGTCCAGCAGGAGATaGTTGAGTGGCTGGAAGCGT +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLLSSRR*LSGWKR
Trigger: ACGCTTCCAGCCACTCAAGCATCTCCTGCTGGACAA...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACCAACCATTGTTGCGCTaGAGCCAGCATTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNQPLLR*SQHCWG
Trigger: ACCCCAACAATGCTGGCTGCAGCGCAACAATGGTTG...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATCACAGCAACCATTGTTaGGCTGCAGCCAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNHSNHC*AAASIV
Trigger: AACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTG...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACCTCAGAGCCATAAGTaGAGCACTGGGATGATTCAC +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPPQSHK*STGMIH
Trigger: GTGAATCATCCCAGTGCTGCACTTATGGCTCTGAGG...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGGTGTCTGTTGGGCAGTaGCAGTCTTGGAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKVSVGQ*QSWKVG
Trigger: GCCCACCTTCCAAGACTGGCACTGCCCAACAGACAC...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCACTATTCCTGGAGGTaGAGCAACATGCTGCGCTAC +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLHYSWR*SNMLRY
Trigger: GTAGCGCAGCATGTTGCTCCACCTCCAGGAATAGTG...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGCTTCACTGTATGATTTaGAAAGACCGTTCTAAGACA +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQLHCMI*KDRSKT
Trigger: TGTCTTAGAACGGTCTTTCCAAATCATACAGTGAAG...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCCATCTGAATGGGAAGTaGTATAGCCCTCCGTTTTAC +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGHLNGK*YSPPFY
Trigger: GTAAAACGGAGGGCTATACCACTTCCCATTCAGATG...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGGGGTGGCATTGCACTTaGGACCAACTGAACATTTTG +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSGWHCT*DQLNIL
Trigger: CAAAATGTTCAGTTGGTCCCAAGTGCAATGCCACCC...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCATTGCCAGAAGTCCCTTaGAAAATGGTTGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSLPEVP*KMVAGL
Trigger: TAGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAA...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTCCAGGTTTTCTCATTaGATCTCCAGGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLSRFSH*ISRLTG
Trigger: TCCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGA...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGATCCTGCAGATAAGCTaGTTGACAATCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLILQIS*LTIPQQ
Trigger: CTGCTGTGGGATTGTCAACCAGCTTATCTGCAGGAT...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAATAGCTAGATATTGGTaGCCCCCTCTGAGATCGGGG +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLIARYW*PPLRSG
Trigger: CCCCGATCTCAGAGGGGGCCACCAATATCTAGCTAT...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCCCTGATGTACCTTCATaGGACTTGTTTCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGPDVPS*DLFLSE
Trigger: TTCTGACAGAAACAAGTCTCATGAAGGTACATCAGG...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR TCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTTTACTCCTACCACATaGATATGTGCCTGCCCATTG +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLFTPTT*ICACPL
Trigger: CAATGGGCAGGCACATATTCATGTGGTAGGAGTAAA...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCAACTCTGCCAAACATATaGCTCTGTGGGACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPTLPNI*LCGTAC
Trigger: ACAAGCTGTCCCACAGAGTCATATGTTTGGCAGAGT...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCATTTGGTGCAATGTTCTaGAACCCTACCCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPFGAMF*NPTLEA
Trigger: AGCCTCAAGGGTAGGGTTTCAGAACATTGCACCAAA...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACGGTTGCTGGGCTATTTaGGATCAGTGGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYGCWAI*DQWTWQ
Trigger: TTGCCAGGTCCACTGATCTCAAATAGCCCAGCAACC...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATCCAGCAGGAGATGCTTaGGTGGCTGGAAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNPAGDA*VAGSVC
Trigger: ACAAACGCTTCCAGCCACTCAAGCATCTCCTGCTGG...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCACTTGTACAGCTGGTaGAGGTGGCATAGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLHLYSW*RWHRSV
Trigger: AACACTCCTATGCCACCTTCACCAGCTGTACAAGTG...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACTGAATGGAGAAGGCTaGGAACTGTTAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLNGEG*ELLGWP
Trigger: GGGCCAGCCTAACAGTTCTCAGCCTTCTCCATTCAG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTCTGAATGGAGAAGGCTaGGAACTGTTAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSLNGEG*ELLGWP
Trigger: GGGCCAGCCTAACAGTTCTCAGCCTTCTCCATTCAG...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCATTGGTAGAAGACTTCTaGCTTCCTGCTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPLVEDF*LPACPG
Trigger: ACCAGGACAAGCAGGAAGTCAGAAGTCTTCTACCAA...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGTGGCTGCAGTGGCATaGAAGGTATTCATTCTATTC +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQVAAVA*KVFILF
Trigger: GAATAGAATGAATACCTTTCATGCCACTGCAGCCAC...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCAATTCTGTCCAAGCTCTaGGCTTGTACACGACAAACG +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPILSKL*ACTRQT
Trigger: CGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAAT...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACCTAGGGATACCCACATaGTTTCAGCGGTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNLGIPT*FQRCLL
Trigger: CAACAGACACCGCTGAAATCATGTGGGTATCCCTAG...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATGTCTGGGTTTGGACTTaGTCTATAGCTTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNVWVWT*SIACGL
Trigger: TAGGCCACAAGCTATAGAGCAAGTCCAAACCCAGAC...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATATGCTGCGCTACAACTaGTCTGGAAGCTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNMLRYN*SGSWGR
Trigger: TCTGCCCCAGCTTCCAGAGCAGTTGTAGCGCAGCAT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTATGCTGCGCTACAACTaGTCTGGAAGCTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGMLRYN*SGSWGR
Trigger: TCTGCCCCAGCTTCCAGAGCAGTTGTAGCGCAGCAT...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGGTGGAGCAACATGCTaGGCTACAACTGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRGGATC*ATTALE
Trigger: TTCCAGAGCAGTTGTAGCGCAGCATGTTGCTCCACC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGGAGGTGGAGCAACATaGTGCGCTACAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNGGGAT*CATTAL
Trigger: CAGAGCAGTTGTAGCGCAGCATGTTGCTCCACCTCC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTATATGTGCCTGCCCATTaGTACTGGAATCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLYVPAH*YWNPPL
Trigger: GAGTGGAGGATTCCAGTAGCAATGGGCAGGCACATA...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGTATGTGCCTGCCCATTaGTACTGGAATCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLYVPAH*YWNPPL
Trigger: GAGTGGAGGATTCCAGTAGCAATGGGCAGGCACATA...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGTACCACATGAATATGTaGCTGCCCATTGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSYHMNM*LPIATG
Trigger: TCCAGTAGCAATGGGCAGGCACATATTCATGTGGTA...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATGCTGGTGAATGTTGCTaGTGTTGCTGCCTTTTCACA +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNAGECC*CCCLFT
Trigger: TGTGAAAAGGCAGCAACAGCAGCAACATTCACCAGC...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATAGGGCTAGGAGCTCTTaGATTATTAGGGGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNRARSS*IIRGRN
Trigger: ATTCCTCCCCCTAATAATGCAAGAGCTCCTAGCCCT...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACTGCACTCCAAAACCTaGGGCTTGGTTACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLHSKT*GLVTGH
Trigger: GTGGCCAGTAACCAAGCCGCAGGTTTTGGAGTGCAG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGTCCCTGACTCACAGTTaGAGGTGCAAAACTCGTATT +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQSLTHS*RCKTRI
Trigger: AATACGAGTTTTGCACCTGCAACTGTGAGTCAGGGA...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGGGCATAGGAGTGTTCTaGGGGACCACATTCTGTACA +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLGIGVF*GTTFCT
Trigger: TGTACAGAATGTGGTCCCGCAGAACACTCCTATGCC...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGTCCTCCATGTTCAGTTaGTGCATGGTAGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQSSMFS*CMVENL
Trigger: CAGGTTTTCTACCATGCAGCAACTGAACATGGAGGA...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGAGACTTCTGACTTCCTaGTTGTCCTGGTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLRLLTS*LSWFIL
Trigger: CAAGATGAACCAGGACAAGCAGGAAGTCAGAAGTCT...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCGCTAGAACTACAGCATaGAATTCAATGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGARTTA*NSMRWK
Trigger: CTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGC...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATCTTTGGATTGCCTGGTaGTACCTCATCATCATCCTC +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNLWIAW*YLIIIL
Trigger: GAGGATGATGATGAGGTACCACCAGGCAATCCAAAG...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR CCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGGTCAGATTTGAAGATTaGTTGGCAACAGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSVRFED*LATGVL
Trigger: GAGGACTCCTGTTGCCAACCAATCTTCAAATCTGAC...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTTGCTGAGACAATATTaGATGCAGAAGTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQLLRQY*MQKLLH
Trigger: ATGTAACAACTTCTGCATCCAATATTGTCTCAGCAA...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTATTGGGTTGGCTGCTGTaGTTGTTGAATAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLLGWLL*LLNRLL
Trigger: CAGCAGCCTATTCAACAACCACAGCAGCCAACCCAA...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCATACGCTTTGTTGGGTTaGCTGCTGTGGTTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSYALLG*LLWLLN
Trigger: ATTCAACAACCACAGCAGCCAACCCAACAAAGCGTA...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAATGGCAGTAGGGACTTaGTTATTAGTAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSMAVGT*LLVAGT
Trigger: TGTCCCAGCTACTAATAACCAAGTCCCTACTGCCAT...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTCTGCGGCTTGGTTACTaGCCACCTGATAGACCACCT +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSLRLGY*PPDRPP
Trigger: AGGTGGTCTATCAGGTGGCCAGTAACCAAGCCGCAG...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATTGGAAGCGTTTGTACTaGAAGTCCAACTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNWKRLY*KSNSCL
Trigger: CAGACAGGAGTTGGACTTCCAGTACAAACGCTTCCA...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATTCCAGGTTTTCTCATTaGATCTCCAGGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNSRFSH*ISRLTG
Trigger: TCCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGA...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCATCCAGGTTTTCTCATTaGATCTCCAGGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPSRFSH*ISRLTG
Trigger: TCCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGA...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTATGTGCCCCCTACAGTTaGCTGCTTGGTAGAAGACTT +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLCAPYS*LLGRRL
Trigger: AAGTCTTCTACCAAGCAGCCAACTGTAGGGGGCACA...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAGGCATTTGGCAAGGGTaGAGGAAGCTTCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLGIWQG*RKLPCY
Trigger: GTAACATGGAAGCTTCCTCCACCCTTGCCAAATGCC...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGACAGTATGTGAAATGTaGCTGACTTTGAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQTVCEM*LTLSPP
Trigger: TGGGGGACTCAAAGTCAGCCACATTTCACATACTGT...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTTCCAGTGGCTGCAGTaGCATGAAAGGTATTCATTC +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLFQWLQ*HERYSF
Trigger: GAATGAATACCTTTCATGCCACTGCAGCCACTGGAA...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCGGCCTTCCACATTTTTaGATGCTAATAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGGLPHF*MLIEQA
Trigger: TGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCC...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGAGCAGAAATGGTGGTTaGGAGGCCTTCCACATTTTT +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQSRNGG*EAFHIF
Trigger: AAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCT...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGAGCAGAAATGGTGGTTaGGAGGCCTTCCACATTTTT +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLSRNGG*EAFHIF
Trigger: AAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCT...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAAGCAGAAATGGTGGTTaGGAGGCCTTCCACATTTTT +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSSRNGG*EAFHIF
Trigger: AAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCT...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATACGAGTTCTCAGGTGTaGGTTGGATTACTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNTSSQV*VGLLSL
Trigger: GAGACTCAGTAATCCAACCCACACCTGAGAACTCGT...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGCATCTCCCATTTCCGTaGGCATGTATAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRHLPFP*ACIAPR
Trigger: TCGAGGTGCTATACATGCTCACGGAAATGGGAGATG...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAGGGATTCCTGCAGGTaGAGGAGCAGGAGATACATC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQRDSCR*RSRRYI
Trigger: GATGTATCTCCTGCTCCTTCACCTGCAGGAATCCCT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGATGGTTTGTGATCCATaGGGGATTCCTGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLMVCDP*GIPAGE
Trigger: TTCACCTGCAGGAATCCCTCATGGATCACAAACCAT...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGGTTTCCTATGGTTTGTaGTCCATGAGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLVSYGL*SMRDSC
Trigger: GCAGGAATCCCTCATGGATCACAAACCATAGGAAAC...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGGTGGTGATTAACTGTTaGCCCTGTGAAACTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLVVINC*PCETVE
Trigger: TTCTACAGTTTCACAGGGTCAACAGTTAATCACCAC...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAGTGGTGATTAACTGTTaGCCCTGTGAAACTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSVVINC*PCETVE
Trigger: TTCTACAGTTTCACAGGGTCAACAGTTAATCACCAC...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTGTCCTGTAGCTACCTaGAAATTCTGTACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGCPVAT*KFCTEV
Trigger: AACTTCAGTACAGAATTTTCAGGTAGCTACAGGACA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATGTAGATGAAACTTGCTaGGAAGGGAGAGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNVDETC*EGRGFG
Trigger: ACCAAAACCTCTCCCTTCTCAGCAAGTTTCATCTAC...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTTCACAGATAACATTTaGCTGACAGTAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLFTDNI*LTVGGG
Trigger: ACCACCTCCTACTGTCAGTCAAATGTTATCTGTGAA...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGGCACTTGGGACCAACTaGACATTTTGCTGCCCAACC +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKALGTN*TFCCPT
Trigger: GGTTGGGCAGCAAAATGTTCAGTTGGTCCCAAGTGC...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGGTTGCTGGGCTATTTaGGATCAGTGGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQGCWAI*DQWTWQ
Trigger: TTGCCAGGTCCACTGATCTCAAATAGCCCAGCAACC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGTTCCTGCTGGAGCAATaGGCTGAGTTGCATTTCCCT +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRFLLEQ*AELHFP
Trigger: AGGGAAATGCAACTCAGCTCATTGCTCCAGCAGGAA...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATCCAGCAGGAGATGCTTaGGTGGCTGGAAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDPAGDA*VAGSVC
Trigger: ACAAACGCTTCCAGCCACTCAAGCATCTCCTGCTGG...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGCAGTATCTTGCTGAGTaGTATCTAAAGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQQYLAE*YLKSLV
Trigger: CACAAGGGACTTTAGATATCACTCAGCAAGATACTG...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCACAGTATCTTGCTGAGTaGTATCTAAAGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSQYLAE*YLKSLV
Trigger: CACAAGGGACTTTAGATATCACTCAGCAAGATACTG...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCATTGGCAGTATCTTGCTaGGTGATATCTAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSLAVSC*VISKVP
Trigger: AGGGACTTTAGATATCACTCAGCAAGATACTGCCAA...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATACCTGTGAGGGTGTCTaGAACCACTTTTTACAAGAC +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNTCEGV*NHFLQD
Trigger: GTCTTGTAAAAAGTGGTTTCAGACACCCTCACAGGT...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCAACCTGTGAGGGTGTCTaGAACCACTTTTTACAAGAC +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPTCEGV*NHFLQD
Trigger: GTCTTGTAAAAAGTGGTTTCAGACACCCTCACAGGT...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTATTGGTAGAAGACTTCTaGCTTCCTGCTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLLVEDF*LPACPG
Trigger: ACCAGGACAAGCAGGAAGTCAGAAGTCTTCTACCAA...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GCAGCTGTTAGTCGGATGTGTTTAGTTATTGGTCCCTCTTTTTCATCCTTAAAATTGTGCTCTAGGAGTTaGGCTTGTGCCCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: AAVSRMCLVIGPSFSSLKLCSRS*ACAPYS
Trigger: ACTGTAGGGGGCACAAGCTCAACTCCTAGAGCACAA...TTTTAAGGATGAAAAAGAGGGACCAATAACTAAACACATCCGACTAACAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477947.1
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACATTCTGTCCAAGCTCTaGGCTTGTACACGACAAACG +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNILSKL*ACTRQT
Trigger: CGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAAT...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAATTCTGTCCAAGCTCTaGGCTTGTACACGACAAACG +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLILSKL*ACTRQT
Trigger: CGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAAT...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGGACAATTTAAGGAAGTaGGCAGTTTCTGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSDNLRK*AVSEQE
Trigger: TTCCTGCTCAGAAACTGCTCACTTCCTTAAATTGTC...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACTCTCAAACATTCCTTTaGGACATGGCAGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYSQTFL*DMAGQR
Trigger: GCGCTGTCCTGCCATGTCTCAAAGGAATGTTTGAGA...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGCAGCATGCAATTCAATaGGGTGGAAGAATGGTGAAT +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQQHAIQ*GGRMVN
Trigger: ATTCACCATTCTTCCACCTCATTGAATTGCATGCTG...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGCAGCATGCAATTCAATaGGGTGGAAGAATGGTGAAT +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLQHAIQ*GGRMVN
Trigger: ATTCACCATTCTTCCACCTCATTGAATTGCATGCTG...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCACTAAGTGGGAAGCCATaGTCAGTTTCATTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSLSGKP*SVSLGQ
Trigger: TTGACCTAATGAAACTGATCATGGCTTCCCACTTAG...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGGAAGCTGGGGCAGATaGTACATGAGTCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNGSWGR*YMSLGL
Trigger: CAAACCCAGACTCATGTAGCATCTGCCCCAGCTTCC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGGTGGAGCAACATGCTaGGCTACAACTGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNGGATC*ATTALE
Trigger: TTCCAGAGCAGTTGTAGCGCAGCATGTTGCTCCACC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGGTGTGTAATGGAGACTaGTGTGGAATTACAGATGGA +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLVCNGD*CGITDG
Trigger: TCCATCTGTAATTCCACAGCAGTCTCCATTACACAC...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATAGGGAGAGGTTTTGGTaGAATGTTCTGAAACCCTAC +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNRERFW*NVLKPY
Trigger: GTAGGGTTTCAGAACATTGCACCAAAACCTCTCCCT...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGGCTGGAGTTTGCCCCTaGACTCCAAAACCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWAGVCP*TPKPAA
Trigger: AGCCGCAGGTTTTGGAGTGCAGGGGCAAACTCCAGC...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATAGCAATGAGCTGAGTTaGATTTCCCTGACTCACAGT +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNSNELS*ISLTHS
Trigger: ACTGTGAGTCAGGGAAATGCAACTCAGCTCATTGCT...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACAGTCCAACTCCTGTCTaGGTTCCGCTCATGGTAATT +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNSPTPV*VPLMVI
Trigger: AATTACCATGAGCGGAACGCAGACAGGAGTTGGACT...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTGTCCAGCAGGAGATaGTTGAGTGGCTGGAAGCGT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLSSRR*LSGWKR
Trigger: ACGCTTCCAGCCACTCAAGCATCTCCTGCTGGACAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGAAGCCTCCTGTATACTaGTCACAGATGAACCACCCA +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLKPPVY*SQMNHP
Trigger: TGGGTGGTTCATCTGTGAGCAGTATACAGGAGGCTT...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATCAACCATTGTTGCGCTaGAGCCAGCATTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNQPLLR*SQHCWG
Trigger: ACCCCAACAATGCTGGCTGCAGCGCAACAATGGTTG...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTGCTTGGATCTGCTCCTaGTGGCACAGCAACCATTGT +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGAWICS*WHSNHC
Trigger: ACAATGGTTGCTGTGCCAGCAGGAGCAGATCCAAGC...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTTACAGTGCTTGGATCTaGTCCTGCTGGCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGYSAWI*SCWHSN
Trigger: GTTGCTGTGCCAGCAGGAGCAGATCCAAGCACTGTA...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATACAGTGCTTGGATCTaGTCCTGCTGGCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQYSAWI*SCWHSN
Trigger: GTTGCTGTGCCAGCAGGAGCAGATCCAAGCACTGTA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGGCATAGGAGTGTTCTaGGGGACCACATTCTGTACA +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRGIGVF*GTTFCT
Trigger: TGTACAGAATGTGGTCCCGCAGAACACTCCTATGCC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTCTGTTAGGCTGGCCCTaGACTTGTACAGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSLLGWP*TCTAGE
Trigger: TTCACCAGCTGTACAAGTGCAGGGCCAGCCTAACAG...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGCCTTCCCAAAGACACTaGCCTGGATATACATCTTTT +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQPSQRH*PGYTSF
Trigger: AAAAGATGTATATCCAGGGCAGTGTCTTTGGGAAGG...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCAGCATCCTTTGAACAGTaGTTATCCTGCAAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPASFEQ*LSCKWV
Trigger: TACCCACTTGCAGGATAAGCACTGTTCAAAGGATGC...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATGCATCCTTTGAACAGTaGTTATCCTGCAAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNASFEQ*LSCKWV
Trigger: TACCCACTTGCAGGATAAGCACTGTTCAAAGGATGC...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATGCATCCTTTGAACAGTaGTTATCCTGCAAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNASFEQ*LSCKWV
Trigger: TACCCACTTGCAGGATAAGCACTGTTCAAAGGATGC...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACCCTCAGAGCCATAAGTaGAGCACTGGGATGATTCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYPQSHK*STGMIH
Trigger: GTGAATCATCCCAGTGCTGCACTTATGGCTCTGAGG...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAGGAAGCTGTGGCTTTaGATTGCCTGGTGGTACCTC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNRKLWL*IAWWYL
Trigger: GAGGTACCACCAGGCAATCCAAAGCCACAGCTTCCT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATGCGCTACAACTGCTCTaGAAGCTGGGGCAGATGCTA +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDALQLL*KLGQML
Trigger: TAGCATCTGCCCCAGCTTCCAGAGCAGTTGTAGCGC...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCAACAGTATCTTGTGACTaGCTACCAGCTGATGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPTVSCD*LPADVC
Trigger: ACAGACATCAGCTGGTAGCCAGTCACAAGATACTGT...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCAAGAAGGGAGAGGTTTTaGTGCAATGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPRRERF*CNVLKP
Trigger: GGGTTTCAGAACATTGCACCAAAACCTCTCCCTTCT...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACATCACTACGCTTTGTTaGGTTGGCTGCTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNITTLC*VGCCGC
Trigger: ACAACCACAGCAGCCAACCCAACAAAGCGTAGTGAT...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATTTGACCTTGTTGAGCTaGCTGGCTTACAATCACTAC +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNLTLLS*LAYNHY
Trigger: GTAGTGATTGTAAGCCAGCCAGCTCAACAAGGTCAA...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCATTGACCTTGTTGAGCTaGCTGGCTTACAATCACTAC +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPLTLLS*LAYNHY
Trigger: GTAGTGATTGTAAGCCAGCCAGCTCAACAAGGTCAA...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGAACTGTCTGACCAGCTaGAAGAGCTGCTGGATTAGC +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRNCLTS*KSCWIS
Trigger: GCTAATCCAGCAGCTCTTCCAGCTGGTCAGACAGTT...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGTTTGTAAGTTCGAAATaGGCACAGTTTGTACTCCCC +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQFVSSK*AQFVLP
Trigger: GGGGAGTACAAACTGTGCCCATTTCGAACTTACAAA...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTACATGGTAATTCCTGCTaGAGCAATGAGCTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLHGNSC*SNELSC
Trigger: GCAACTCAGCTCATTGCTCCAGCAGGAATTACCATG...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAAGATGCTTGAGTGGCTaGAAGCGTTTGTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLRCLSG*KRLYWK
Trigger: CTTCCAGTACAAACGCTTCCAGCCACTCAAGCATCT...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCATTGCTGGTGTTTGTaGCTCCTCGTCGGCAGGACG +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINHCWCL*LLVGRT
Trigger: CGTCCTGCCGACGAGGAGCCACAAACACCAGCAATG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACTTGTATCCCCATTGCTaGTGTTTGTGGCTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYLYPHC*CLWLLV
Trigger: GACGAGGAGCCACAAACACCAGCAATGGGGATACAA...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATCCCTTGTGGTTCCATTaGAGATATCTCACCATTTCC +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNPLWFH*RYLTIS
Trigger: GGAAATGGTGAGATATCTCCAATGGAACCACAAGGG...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGATCAGTATCCTCTGCTaGCCTCTTTACAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQISILC*PLYSFA
Trigger: TGCAAAACTGTAAAGAGGCCAGCAGAGGATACTGAT...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTTCAGCGGTGTCTGTTaGGCAGTGCCAGTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKFSGVC*AVPVLE
Trigger: TTCCAAGACTGGCACTGCCCAACAGACACCGCTGAA...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACAAAATCACTGCAATCTaGAGTACCCGCTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNKITAI*STRCPS
Trigger: TGAAGGACAGCGGGTACTTCAGATTGCAGTGATTTT...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACGGGGCAGATGCTACATaGGTCTGGGTTTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINGADAT*VWVWTC
Trigger: GCAAGTCCAAACCCAGACTCATGTAGCATCTGCCCC...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGGCAACAGGAGTCCTCTaGAAATGGTTTCCTATGGTT +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLATGVL*KWFPMV
Trigger: AACCATAGGAAACCATTTTCAGAGGACTCCTGTTGC...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGTGTTGCTGGTGGGTATaGGGTGAAGGATTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRCCWWV*GEGFCG
Trigger: TCCACAAAATCCTTCACCTCATACCCACCAGCAACA...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGTTGGGGTGATGTGGTaGTTAACTGTTGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQVGVMW*LTVDPV
Trigger: CACAGGGTCAACAGTTAATCACCACATCACCCCAAC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCTGAAACCCTACCCTTaGGGCTTGTGGACTTGGGAC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINLKPYP*GLWTWD
Trigger: GTCCCAAGTCCACAAGCCTCAAGGGTAGGGTTTCAG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACAGTTTGTACTCCCCCTaGGGGTGGCATTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINSLYSP*GWHCTW
Trigger: CCAAGTGCAATGCCACCCTCAGGGGGAGTACAAACT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTCCTGCTGGAGCAATaGGCTGAGTTGCATTTCCCT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQFLLEQ*AELHFP
Trigger: AGGGAAATGCAACTCAGCTCATTGCTCCAGCAGGAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTTTCCTGCTGGAGCAATaGGCTGAGTTGCATTTCCCT +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSFLLEQ*AELHFP
Trigger: AGGGAAATGCAACTCAGCTCATTGCTCCAGCAGGAA...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATTTGGCAGTATCTTGCTaGGTGATATCTAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNLAVSC*VISKVP
Trigger: AGGGACTTTAGATATCACTCAGCAAGATACTGCCAA...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGGTTGTAGAATGTGGTaGGACAACTACACTTGGGCG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQGCRMW*DNYTWA
Trigger: CGCCCAAGTGTAGTTGTCTCACCACATTCTACAACC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATTGCTGTTGCTTTTGCTaGACAGCACTTTCTATTGCT +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNCCCFC*TALSIA
Trigger: AGCAATAGAAAGTGCTGTTCAGCAAAAGCAACAGCA...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATCACTTGTACAGCTGGTaGAGGTGGCATAGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNHLYSW*RWHRSV
Trigger: AACACTCCTATGCCACCTTCACCAGCTGTACAAGTG...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACAGTGCAGCACTGGGATaGTTCACAATGGCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYSAALG*FTMAFC
Trigger: ACAAAAGGCCATTGTGAATCATCCCAGTGCTGCACT...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGGATGGTACTGAATTCTaGTCATACCAGTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLDGTEF*SYQFPS
Trigger: TGATGGAAACTGGTATGATCAGAATTCAGTACCATC...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGCAATGTGGATGGTACTaGATTCTGATCATACCAGTT +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSQCGWY*ILIIPV
Trigger: AACTGGTATGATCAGAATTCAGTACCATCCACATTG...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAGTGGCTGCAGTGGCATaGAAGGTATTCATTCTATTC +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLVAAVA*KVFILF
Trigger: GAATAGAATGAATACCTTTCATGCCACTGCAGCCAC...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATAATCAAATAGGTAGGTaGCCGTTATACCTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNNQIGR*PLYLAF
Trigger: GAAGGCAAGGTATAACGGTCACCTACCTATTTGATT...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATCTAAGTGGGAAGCCATaGTCAGTTTCATTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNLSGKP*SVSLGQ
Trigger: TTGACCTAATGAAACTGATCATGGCTTCCCACTTAG...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGGGAGGTGGAGCAACATaGTGCGCTACAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWGGGAT*CATTAL
Trigger: CAGAGCAGTTGTAGCGCAGCATGTTGCTCCACCTCC...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATCACGAGCTAATTTACTaGAAGTCGAGAGGTATTCAG +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNHELIY*KSRGIQ
Trigger: CTGAATACCTCTCGACTTGCAGTAAATTAGCTCGTG...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTATGTGCCTGCCCATTaGTACTGGAATCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNYVPAH*YWNPPL
Trigger: GAGTGGAGGATTCCAGTAGCAATGGGCAGGCACATA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGACCAGCTGGAAGAGCTaGTGGATTAGCAAGAACAAT +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLTSWKS*WISKNN
Trigger: ATTGTTCTTGCTAATCCAGCAGCTCTTCCAGCTGGT...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACGCTGGTGAATGTTGCTaGTGTTGCTGCCTTTTCACA +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYAGECC*CCCLFT
Trigger: TGTGAAAAGGCAGCAACAGCAGCAACATTCACCAGC...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAGGCTGACCAACTCCTaGATTCGACTGTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQRLTNS*IRLLRL
Trigger: CAACCTCAACAGTCGAATGCAGGAGTTGGTCAGCCT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAACTCACAGTTGCAGGTaGAAAACTCGTATTTGGCAC +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLTHSCR*KTRIWH
Trigger: GTGCCAAATACGAGTTTTGCACCTGCAACTGTGAGT...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGTCAGTACCACTAAATTaGTGTGTTGCCGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSSVPLN*CVAAFE
Trigger: TTCAAATGCGGCAACACAGCAATTTAGTGGTACTGA...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTTTATTTGGAATTCCTaGGACTGTTTCCCTATCAGT +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGFIWNS*DCFPIS
Trigger: ACTGATAGGGAAACAGTCGCAGGAATTCCAAATAAA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATCAACCATTGTTGCGCTaGAGCCAGCATTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDQPLLR*SQHCWG
Trigger: ACCCCAACAATGCTGGCTGCAGCGCAACAATGGTTG...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTCACAGCAACCATTGTTaGGCTGCAGCCAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGHSNHC*AAASIV
Trigger: AACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTG...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACACAGCAACCATTGTTaGGCTGCAGCCAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQHSNHC*AAASIV
Trigger: AACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAACAGCACTTTCTATTaGTACTTTAGCTACAGTGCT +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGNSTFY*YFSYSA
Trigger: AGCACTGTAGCTAAAGTAGCAATAGAAAGTGCTGTT...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGGCATAGGAGTGTTCTaGGGGACCACATTCTGTACA +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNGIGVF*GTTFCT
Trigger: TGTACAGAATGTGGTCCCGCAGAACACTCCTATGCC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTGGCATAGGAGTGTTCTaGGGGACCACATTCTGTACA +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSGIGVF*GTTFCT
Trigger: TGTACAGAATGTGGTCCCGCAGAACACTCCTATGCC...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGCACTTTTTACAAGACTaGCACAGACACATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLHFLQD*HRHMKF
Trigger: GAACTTCATGTGTCTGTGGCAGTCTTGTAAAAAGTG...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGCACTTTTTACAAGACTaGCACAGACACATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSHFLQD*HRHMKF
Trigger: GAACTTCATGTGTCTGTGGCAGTCTTGTAAAAAGTG...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTATCCTCCATGTTCAGTTaGTGCATGGTAGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLSSMFS*CMVENL
Trigger: CAGGTTTTCTACCATGCAGCAACTGAACATGGAGGA...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGAGACTTCTGACTTCCTaGTTGTCCTGGTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLRLLTS*LSWFIL
Trigger: CAAGATGAACCAGGACAAGCAGGAAGTCAGAAGTCT...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACCTCAGAGCCATAAGTaGAGCACTGGGATGATTCAC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQPQSHK*STGMIH
Trigger: GTGAATCATCCCAGTGCTGCACTTATGGCTCTGAGG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422737.6
ENST00000477947.1
CDS-3UTR GCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATTGTATTTCCAGTGGCTaGAGTGGCATGAAAGGTATT +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNCISSG*SGMKGI
Trigger: AATACCTTTCATGCCACTGCAGCCACTGGAAATACA...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTACCAATAGGAAGCTGTaGCTTTGGATTGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGTNRKL*LWIAWW
Trigger: CCACCAGGCAATCCAAAGCCACAGCTTCCTATTGGT...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAACTGCTCTGGAAGCTaGGGCAGATGCTACATGAGT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNNCSGS*GRCYMS
Trigger: ACTCATGTAGCATCTGCCCCAGCTTCCAGAGCAGTT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGGCGCTACAACTGCTCTaGAAGCTGGGGCAGATGCTA +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVALQLL*KLGQML
Trigger: TAGCATCTGCCCCAGCTTCCAGAGCAGTTGTAGCGC...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACGCGCTACAACTGCTCTaGAAGCTGGGGCAGATGCTA +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINALQLL*KLGQML
Trigger: TAGCATCTGCCCCAGCTTCCAGAGCAGTTGTAGCGC...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACCTGCCCATTGCTACTaGAATCCTCCACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQPAHCY*NPPLSS
Trigger: TGAAGAGAGTGGAGGATTCCAGTAGCAATGGGCAGG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAACAGAAGTAGAAACTaGTTGCTGCTGATAGTACAT +
Preference number: 4 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGNRSRN*LLLIVH
Trigger: ATGTACTATCAGCAGCAACCAGTTTCTACTTCTGTT...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCATTGAATGACAGTCACTaGAGCATTTTGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPLNDSH*SILLLV
Trigger: CACCAGCAACAAAATGCTCCAGTGACTGTCATTCAA...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAACAGGAACTCCTGTCTaGGGTATGGAATTCTGGATA +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLTGTPV*GMEFWI
Trigger: TATCCAGAATTCCATACCCCAGACAGGAGTTCCTGT...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAAGTTGTTACATACTGTaGGGGTGCTATGATAACAGT +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSSCYIL*GCYDNS
Trigger: ACTGTTATCATAGCACCCCCACAGTATGTAACAACT...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTGGGTTGGCTGCTGTaGTTGTTGAATAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLGWLL*LLNRLL
Trigger: CAGCAGCCTATTCAACAACCACAGCAGCCAACCCAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAACTGTCTGACCAGCTaGAAGAGCTGCTGGATTAGC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQNCLTS*KSCWIS
Trigger: GCTAATCCAGCAGCTCTTCCAGCTGGTCAGACAGTT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCTGCGGCTTGGTTACTaGCCACCTGATAGACCACCT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINLRLGY*PPDRPP
Trigger: AGGTGGTCTATCAGGTGGCCAGTAACCAAGCCGCAG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTCAGGAGATGCTTGAGTaGCTGGAAGCGTTTGTACTG +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSQEMLE*LEAFVL
Trigger: CAGTACAAACGCTTCCAGCCACTCAAGCATCTCCTG...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACAGGAGATGCTTGAGTaGCTGGAAGCGTTTGTACTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQQEMLE*LEAFVL
Trigger: CAGTACAAACGCTTCCAGCCACTCAAGCATCTCCTG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTCAGGAGATGCTTGAGTaGCTGGAAGCGTTTGTACTG +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGQEMLE*LEAFVL
Trigger: CAGTACAAACGCTTCCAGCCACTCAAGCATCTCCTG...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTTGTATCCCCATTGCTaGTGTTTGTGGCTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKLYPHC*CLWLLV
Trigger: GACGAGGAGCCACAAACACCAGCAATGGGGATACAA...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATTGGATCTGCTCCTGCTaGCACAGCAACCATTGTTGC +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDWICSC*HSNHCC
Trigger: GCAACAATGGTTGCTGTGCCAGCAGGAGCAGATCCA...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTTTAGCTACAGTGCTTaGATCTGCTCCTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNFSYSA*ICSCWH
Trigger: GTGCCAGCAGGAGCAGATCCAAGCACTGTAGCTAAA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTTTAGCTACAGTGCTTaGATCTGCTCCTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKFSYSA*ICSCWH
Trigger: GTGCCAGCAGGAGCAGATCCAAGCACTGTAGCTAAA...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGTGCTTATCCTGCAAGTaGGTAATAAAAGAAAACCGC +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQCLSCK*VIKENR
Trigger: GCGGTTTTCTTTTATTACCCACTTGCAGGATAAGCA...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATGTGCCCCCTACAGTTaGCTGCTTGGTAGAAGACTT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQCAPYS*LLGRRL
Trigger: AAGTCTTCTACCAAGCAGCCAACTGTAGGGGGCACA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422737.6
ENST00000477947.1
CDS-3UTR CCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATCCCCCACTGTGTAAGTaGAATTATTTTTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNPPLCK*NYFSLQ
Trigger: CTGCAGTGAAAAATAATTCCACTTACACAGTGGGGG...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAACAGTATGTGAAATGTaGCTGACTTTGAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLTVCEM*LTLSPP
Trigger: TGGGGGACTCAAAGTCAGCCACATTTCACATACTGT...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATATAGCTAGATATTGGTaGCCCCCTCTGAGATCGGGG +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDIARYW*PPLRSG
Trigger: CCCCGATCTCAGAGGGGGCCACCAATATCTAGCTAT...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGACACAGCAGAAATGGTaGTTGGGAGGCCTTCCACAT +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKTQQKW*LGGLPH
Trigger: ATGTGGAAGGCCTCCCAACCACCATTTCTGCTGTGT...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACACGAGTTCTCAGGTGTaGGTTGGATTACTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYTSSQV*VGLLSL
Trigger: GAGACTCAGTAATCCAACCCACACCTGAGAACTCGT...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACTCAGGGCCAAACATCTaGATATCCATAGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNSGPNI*ISIETR
Trigger: TCTGGTTTCTATGGATATTCAGATGTTTGGCCCTGA...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR TCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATACTCTCTTCACTGTATaGTTTGGAAAGACCGTTCTA +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNTLFTV*FGKTVL
Trigger: TAGAACGGTCTTTCCAAATCATACAGTGAAGAGAGT...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAATGGTTTGTGATCCATaGGGGATTCCTGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQMVCDP*GIPAGE
Trigger: TTCACCTGCAGGAATCCCTCATGGATCACAAACCAT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGTTTCCTATGGTTTGTaGTCCATGAGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNVSYGL*SMRDSC
Trigger: GCAGGAATCCCTCATGGATCACAAACCATAGGAAAC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACTGTTGCAGTCAGATTTaGAGATTGGTTGGCAACAGG +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYCCSQI*RLVGNR
Trigger: CCTGTTGCCAACCAATCTTCAAATCTGACTGCAACA...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGGTTTGTGCCACAGTATaGACACCTTGTACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLVCATV*TPCTGK
Trigger: TTTTCCTGTACAAGGTGTTCATACTGTGGCACAAAC...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATGTTGCTGGTGGGTATaGGGTGAAGGATTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQCCWWV*GEGFCG
Trigger: TCCACAAAATCCTTCACCTCATACCCACCAGCAACA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACATTGGAGCTTTACTTTaGATGACAGTCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNIGALL*MTVTGA
Trigger: TGCTCCAGTGACTGTCATTCAAAGTAAAGCTCCAAT...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTGTAACAGGAGTGCCTaGAGGGATCTGTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINCNRSA*RDLSWY
Trigger: GTACCAGGACAGATCCCTTCAGGCACTCCTGTTACA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAACTCTGCCAAACATATaGCTCTGTGGGACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQTLPNI*LCGTAC
Trigger: ACAAGCTGTCCCACAGAGTCATATGTTTGGCAGAGT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACCAGCTGATGTCTGTTaGGATGAAGTTTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQPADVC*DEVCTG
Trigger: ACCTGTGCAAACTTCATCTCAACAGACATCAGCTGG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTTGGTGCAATGTTCTaGAACCCTACCCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQFGAMF*NPTLEA
Trigger: AGCCTCAAGGGTAGGGTTTCAGAACATTGCACCAAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACGTAGATGAAACTTGCTaGGAAGGGAGAGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYVDETC*EGRGFG
Trigger: ACCAAAACCTCTCCCTTCTCAGCAAGTTTCATCTAC...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACTGTACCACTGTAGATaGAACTTGCTGAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLYHCR*NLLRRE
Trigger: CTCCCTTCTCAGCAAGTTTCATCTACAGTGGTACAG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACGGCTGCTGTGGTTGTTaGATAGGCTGCTGTACCACT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINGCCGC*IGCCTT
Trigger: AGTGGTACAGCAGCCTATTCAACAACCACAGCAGCC...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCTTACCACCTGGTGTTaGAGGACCACGTTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINLTTWC*RTTFRK
Trigger: CTTCCGAAACGTGGTCCTTCAACACCAGGTGGTAAG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACGCACTTGGGACCAACTaGACATTTTGCTGCCCAACC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINALGTN*TFCCPT
Trigger: GGTTGGGCAGCAAAATGTTCAGTTGGTCCCAAGTGC...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACGGAACTGCTATGATTTaGTGTCCCTGTATAACAGAG +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNGTAMI*CPCITE
Trigger: CTCTGTTATACAGGGACATCAAATCATAGCAGTTCC...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGACCTGTGAGGGTGTCTaGAACCACTTTTTACAAGAC +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRTCEGV*NHFLQD
Trigger: GTCTTGTAAAAAGTGGTTTCAGACACCCTCACAGGT...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTGGTAGAAGACTTCTaGCTTCCTGCTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLVEDF*LPACPG
Trigger: ACCAGGACAAGCAGGAAGTCAGAAGTCTTCTACCAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422737.6
ENST00000477947.1
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTGTGCTCTAGGAGTTaGGCTTGTGCCCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINLCSRS*ACAPYS
Trigger: ACTGTAGGGGGCACAAGCTCAACTCCTAGAGCACAA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATGATGGTACTGAATTCTaGTCATACCAGTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNDGTEF*SYQFPS
Trigger: TGATGGAAACTGGTATGATCAGAATTCAGTACCATC...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATCAATGTGGATGGTACTaGATTCTGATCATACCAGTT +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNQCGWY*ILIIPV
Trigger: AACTGGTATGATCAGAATTCAGTACCATCCACATTG...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACAATGTGGATGGTACTaGATTCTGATCATACCAGTT +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPQCGWY*ILIIPV
Trigger: AACTGGTATGATCAGAATTCAGTACCATCCACATTG...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGAATCAAATAGGTAGGTaGCCGTTATACCTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLNQIGR*PLYLAF
Trigger: GAAGGCAAGGTATAACGGTCACCTACCTATTTGATT...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACAATCAAATAGGTAGGTaGCCGTTATACCTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNNQIGR*PLYLAF
Trigger: GAAGGCAAGGTATAACGGTCACCTACCTATTTGATT...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTACCTCCAAATTCAAGCTaGAGATTTGGATACACTGTG +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLPPNSS*RFGYTV
Trigger: CACAGTGTATCCAAATCTTCAGCTTGAATTTGGAGG...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGAGCTCATCATGGCCTaGCCTAGGCATAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQELIMA*PRHKLL
Trigger: CAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422737.6
ENST00000477947.1
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGTCTGGGTTTGGACTTaGTCTATAGCTTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQVWVWT*SIACGL
Trigger: TAGGCCACAAGCTATAGAGCAAGTCCAAACCCAGAC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTGTCTGGGTTTGGACTTaGTCTATAGCTTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGVWVWT*SIACGL
Trigger: TAGGCCACAAGCTATAGAGCAAGTCCAAACCCAGAC...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAGTGTGTAATGGAGACTaGTGTGGAATTACAGATGGA +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLVCNGD*CGITDG
Trigger: TCCATCTGTAATTCCACAGCAGTCTCCATTACACAC...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGAACTGTAGAAGTACATaGTGGTATGTTCTGTACTCT +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQNCRST*WYVLYS
Trigger: AGAGTACAGAACATACCAGCATGTACTTCTACAGTT...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATTACATACTGTGGGGGTaGTATGATAACAGTATCTTG +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNYILWG*YDNSIL
Trigger: CAAGATACTGTTATCATAGCACCCCCACAGTATGTA...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGAGGGAGAGGTTTTGGTaGAATGTTCTGAAACCCTAC +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRRERFW*NVLKPY
Trigger: GTAGGGTTTCAGAACATTGCACCAAAACCTCTCCCT...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACACCAGCTGGAAGAGCTaGTGGATTAGCAAGAACAAT +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYTSWKS*WISKNN
Trigger: ATTGTTCTTGCTAATCCAGCAGCTCTTCCAGCTGGT...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACGAATGTTGCTGCTGTTaGTGCCTTTTCACAGATAAC +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNECCCC*CLFTDN
Trigger: GTTATCTGTGAAAAGGCAGCAACAGCAGCAACATTC...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGCTGGTGAATGTTGCTaGTGTTGCTGCCTTTTCACA +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNAGECC*CCCLFT
Trigger: TGTGAAAAGGCAGCAACAGCAGCAACATTCACCAGC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAGGGCTAGGAGCTCTTaGATTATTAGGGGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNRARSS*IIRGRN
Trigger: ATTCCTCCCCCTAATAATGCAAGAGCTCCTAGCCCT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGGCTCATGGTAATTCCTaGTGGAGCAATGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKAHGNS*WSNELS
Trigger: ACTCAGCTCATTGCTCCAGCAGGAATTACCATGAGC...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAGTCCAACTCCTGTCTaGGTTCCGCTCATGGTAATT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNSPTPV*VPLMVI
Trigger: AATTACCATGAGCGGAACGCAGACAGGAGTTGGACT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTACCTATCAGTATCCTCTaGTGGCCTCTTTACAGTTTT +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLPISIL*WPLYSF
Trigger: AAAACTGTAAAGAGGCCAGCAGAGGATACTGATAGG...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACGCTTGGATCTGCTCCTaGTGGCACAGCAACCATTGT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINAWICS*WHSNHC
Trigger: ACAATGGTTGCTGTGCCAGCAGGAGCAGATCCAAGC...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGAACAGCACTTTCTATTaGTACTTTAGCTACAGTGCT +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLNSTFY*YFSYSA
Trigger: AGCACTGTAGCTAAAGTAGCAATAGAAAGTGCTGTT...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCTGTTAGGCTGGCCCTaGACTTGTACAGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINLLGWP*TCTAGE
Trigger: TTCACCAGCTGTACAAGTGCAGGGCCAGCCTAACAG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACCCTTCCCAAAGACACTaGCCTGGATATACATCTTTT +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNPSQRH*PGYTSF
Trigger: AAAAGATGTATATCCAGGGCAGTGTCTTTGGGAAGG...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGAGACTTCTGACTTCCTaGTTGTCCTGGTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRRLLTS*LSWFIL
Trigger: CAAGATGAACCAGGACAAGCAGGAAGTCAGAAGTCT...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTATGTATTTCCAGTGGCTaGAGTGGCATGAAAGGTATT +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLCISSG*SGMKGI
Trigger: AATACCTTTCATGCCACTGCAGCCACTGGAAATACA...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATCTTTGGATTGCCTGGTaGTACCTCATCATCATCCTC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNLWIAW*YLIIIL
Trigger: GAGGATGATGATGAGGTACCACCAGGCAATCCAAAG...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCACTATTCCTGGAGGTaGAGCAACATGCTGCGCTAC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINHYSWR*SNMLRY
Trigger: GTAGCGCAGCATGTTGCTCCACCTCCAGGAATAGTG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCACTTCACTGTATGATTTaGAAAGACCGTTCTAAGACA +
Preference number: 4 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSLHCMI*KDRSKT
Trigger: TGTCTTAGAACGGTCTTTCCAAATCATACAGTGAAG...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGAACAGAAGTAGAAACTaGTTGCTGCTGATAGTACAT +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQNRSRN*LLLIVH
Trigger: ATGTACTATCAGCAGCAACCAGTTTCTACTTCTGTT...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATTGGGGTATGGAATTCTaGATAACTGTAGCCTTAACA +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNWGMEF*ITVALT
Trigger: TGTTAAGGCTACAGTTATCCAGAATTCCATACCCCA...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGAAACATATGACTCTGTaGGACAGCTTGTTGAATTAC +
Preference number: 4 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSKHMTL*DSLLNY
Trigger: GTAATTCAACAAGCTGTCCCACAGAGTCATATGTTT...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATAGTTGTTACATACTGTaGGGGTGCTATGATAACAGT +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNSCYIL*GCYDNS
Trigger: ACTGTTATCATAGCACCCCCACAGTATGTAACAACT...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATATCACTACGCTTTGTTaGGTTGGCTGCTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNITTLC*VGCCGC
Trigger: ACAACCACAGCAGCCAACCCAACAAAGCGTAGTGAT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTAGGAATCTGTGGAGCTaGGAGAATAAGCTTACCACC +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGRNLWS*ENKLTT
Trigger: GGTGGTAAGCTTATTCTCCCAGCTCCACAGATTCCT...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAGGAATCTGTGGAGCTaGGAGAATAAGCTTACCACC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQRNLWS*ENKLTT
Trigger: GGTGGTAAGCTTATTCTCCCAGCTCCACAGATTCCT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGGGTGGCATTGCACTTaGGACCAACTGAACATTTTG +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNGWHCT*DQLNIL
Trigger: CAAAATGTTCAGTTGGTCCCAAGTGCAATGCCACCC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTTTGCCAGAAGTCCCTTaGAAAATGGTTGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGLPEVP*KMVAGL
Trigger: TAGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAA...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTTGCCAGAAGTCCCTTaGAAAATGGTTGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNLPEVP*KMVAGL
Trigger: TAGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTACTGTTATGGTTACCTaGTTGCCAGAAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGTVMVT*LPEVPW
Trigger: CCAAGGGACTTCTGGCAACCAGGTAACCATAACAGT...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATACTGTTATGGTTACCTaGTTGCCAGAAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNTVMVT*LPEVPW
Trigger: CCAAGGGACTTCTGGCAACCAGGTAACCATAACAGT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATCATGGTAATTCCTGCTaGAGCAATGAGCTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNHGNSC*SNELSC
Trigger: GCAACTCAGCTCATTGCTCCAGCAGGAATTACCATG...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATGGAAGCGTTTGTACTaGAAGTCCAACTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQWKRLY*KSNSCL
Trigger: CAGACAGGAGTTGGACTTCCAGTACAAACGCTTCCA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAGATGCTTGAGTGGCTaGAAGCGTTTGTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNRCLSG*KRLYWK
Trigger: CTTCCAGTACAAACGCTTCCAGCCACTCAAGCATCT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACCCCTTGTGGTTCCATTaGAGATATCTCACCATTTCC +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYPLWFH*RYLTIS
Trigger: GGAAATGGTGAGATATCTCCAATGGAACCACAAGGG...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAATCAGTATCCTCTGCTaGCCTCTTTACAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLISILC*PLYSFA
Trigger: TGCAAAACTGTAAAGAGGCCAGCAGAGGATACTGAT...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGAACTCCTACTTTATTTaGAATTCCTGCGACTGTTTC +
Preference number: 4 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQNSYFI*NSCDCF
Trigger: GAAACAGTCGCAGGAATTCCAAATAAAGTAGGAGTT...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTGGATCTGCTCCTGCTaGCACAGCAACCATTGTTGC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINWICSC*HSNHCC
Trigger: GCAACAATGGTTGCTGTGCCAGCAGGAGCAGATCCA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGATCTGCTCCTGCTaGCACAGCAACCATTGTTGC +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWWICSC*HSNHCC
Trigger: GCAACAATGGTTGCTGTGCCAGCAGGAGCAGATCCA...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATTGTGCCCCCTACAGTTaGCTGCTTGGTAGAAGACTT +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDCAPYS*LLGRRL
Trigger: AAGTCTTCTACCAAGCAGCCAACTGTAGGGGGCACA...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp ACTTTGGCTACAGAAAACATATTACTCACCTGCGACCACATTCTGAATATTTACTGTGCCCCCTACAGTTaGCTGCTTGGTAGAAGACTT +
Preference number: 4 (lower is better)
Translates to: TLATENILLTCDHILNIYCAPYS*LLGRRL
Trigger: AAGTCTTCTACCAAGCAGCCAACTGTAGGGGGCACA...GTAAATATTCAGAATGTGGTCGCAGGTGAGTAATATGTTTTCTGTAGCCAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477947.1
CDS-3UTR CCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATGGCATTTGGCAAGGGTaGAGGAAGCTTCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDGIWQG*RKLPCY
Trigger: GTAACATGGAAGCTTCCTCCACCCTTGCCAAATGCC...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACGTTCATAAAGGCATTTaGCAAGGGTGGAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYVHKGI*QGWRKL
Trigger: AAGCTTCCTCCACCCTTGCCAAATGCCTTTATGAAC...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGACAGTATGTGAAATGTaGCTGACTTTGAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRTVCEM*LTLSPP
Trigger: TGGGGGACTCAAAGTCAGCCACATTTCACATACTGT...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACTTCCAGTGGCTGCAGTaGCATGAAAGGTATTCATTC +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYFQWLQ*HERYSF
Trigger: GAATGAATACCTTTCATGCCACTGCAGCCACTGGAA...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGCATTCCTTTGAGACATaGCAGGACAGCGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWHSFET*QDSARD
Trigger: ATCCCTGGCGCTGTCCTGCCATGTCTCAAAGGAATG...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGTTCAGCGGTGTCTGTTaGGCAGTGCCAGTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWFSGVC*AVPVLE
Trigger: TTCCAAGACTGGCACTGCCCAACAGACACCGCTGAA...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACAGCTTTCGAGGTGGATaGAATAAAGACTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYSFRGG*NKDSQI
Trigger: GATTTGGGAGTCTTTATTTCATCCACCTCGAAAGCT...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAAAATCACTGCAATCTaGAGTACCCGCTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQKITAI*STRCPS
Trigger: TGAAGGACAGCGGGTACTTCAGATTGCAGTGATTTT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCATCTCCCATTTCCGTaGGCATGTATAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINHLPFP*ACIAPR
Trigger: TCGAGGTGCTATACATGCTCACGGAAATGGGAGATG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAACTTGGGTGTTCAATaGGTTTTACCGCAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQNLGVQ*VLPQLV
Trigger: CACTAGCTGCGGTAAAACTCATTGAACACCCAAGTT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTTACTCCTACCACATaGATATGTGCCTGCCCATTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQFTPTT*ICACPL
Trigger: CAATGGGCAGGCACATATTCATGTGGTAGGAGTAAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATGTTTCCTATGGTTTGTaGTCCATGAGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDVSYGL*SMRDSC
Trigger: GCAGGAATCCCTCATGGATCACAAACCATAGGAAAC...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGCAACAGGAGTCCTCTaGAAATGGTTTCCTATGGTT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNATGVL*KWFPMV
Trigger: AACCATAGGAAACCATTTTCAGAGGACTCCTGTTGC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTGTTGCAGTCAGATTTaGAGATTGGTTGGCAACAGG +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNCCSQI*RLVGNR
Trigger: CCTGTTGCCAACCAATCTTCAAATCTGACTGCAACA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTTGTGGGACAGCTTGTTaGATTACTGTAACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSCGTAC*ITVTGV
Trigger: CACTCCTGTTACAGTAATTCAACAAGCTGTCCCACA...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATGTGGGACAGCTTGTTaGATTACTGTAACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQCGTAC*ITVTGV
Trigger: CACTCCTGTTACAGTAATTCAACAAGCTGTCCCACA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGGGTTGTAGAATGTGGTaGGACAACTACACTTGGGCG +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVGCRMW*DNYTWA
Trigger: CGCCCAAGTGTAGTTGTCTCACCACATTCTACAACC...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp ACTTTGGCTACAGAAAACATATTACTCACCTGCGACCACATTCTGAATATTTACTTGGTAGAAGACTTCTaGCTTCCTGCTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: TLATENILLTCDHILNIYLVEDF*LPACPG
Trigger: ACCAGGACAAGCAGGAAGTCAGAAGTCTTCTACCAA...GTAAATATTCAGAATGTGGTCGCAGGTGAGTAATATGTTTTCTGTAGCCAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477947.1
CDS-3UTR TCA 90 bp AAACTAAATTCACTTTGGCTACAGAAAACATATTACTCACCTGCGACCACATTCAGTGCAGCACTGGGATaGTTCACAATGGCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: KLNSLWLQKTYYSPATTFSAALG*FTMAFC
Trigger: ACAAAAGGCCATTGTGAATCATCCCAGTGCTGCACT...GAATGTGGTCGCAGGTGAGTAATATGTTTTCTGTAGCCAAAGTGAATTTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477947.1
CDS-3UTR TCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGCTAGGGATACCCACATaGTTTCAGCGGTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWLGIPT*FQRCLL
Trigger: CAACAGACACCGCTGAAATCATGTGGGTATCCCTAG...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACAGAAAATTCCCCATATaGTGTCAACTACCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYRKFPI*CQLPGA
Trigger: AGCACCTGGTAGTTGACATCATATGGGGAATTTTCT...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGAGAAAATTCCCCATATaGTGTCAACTACCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRRKFPI*CQLPGA
Trigger: AGCACCTGGTAGTTGACATCATATGGGGAATTTTCT...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACGCTGTGGCTTTGGATTaGCTGGTGGTACCTCATCAT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINAVALD*LVVPHH
Trigger: ATGATGAGGTACCACCAGGCAATCCAAAGCCACAGC...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGGTAGGAAGATGGAATTaGACCAATAGGAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKVGRWN*TNRKLW
Trigger: CCACAGCTTCCTATTGGTGCAATTCCATCTTCCTAC...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR GCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTTACCACATGAATATGTaGCTGCCCATTGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGYHMNM*LPIATG
Trigger: TCCAGTAGCAATGGGCAGGCACATATTCATGTGGTA...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATACCACATGAATATGTaGCTGCCCATTGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQYHMNM*LPIATG
Trigger: TCCAGTAGCAATGGGCAGGCACATATTCATGTGGTA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATACCAGCTGGAAGAGCTaGTGGATTAGCAAGAACAAT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNTSWKS*WISKNN
Trigger: ATTGTTCTTGCTAATCCAGCAGCTCTTCCAGCTGGT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGAGGCTGACCAACTCCTaGATTCGACTGTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVRLTNS*IRLLRL
Trigger: CAACCTCAACAGTCGAATGCAGGAGTTGGTCAGCCT...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATACTCACAGTTGCAGGTaGAAAACTCGTATTTGGCAC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNTHSCR*KTRIWH
Trigger: GTGCCAAATACGAGTTTTGCACCTGCAACTGTGAGT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAGCAATGAGCTGAGTTaGATTTCCCTGACTCACAGT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNSNELS*ISLTHS
Trigger: ACTGTGAGTCAGGGAAATGCAACTCAGCTCATTGCT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCCTTTGTATCCCCATTaGTGGTGTTTGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINPLYPH*WCLWLL
Trigger: GAGGAGCCACAAACACCAGCAATGGGGATACAAAGG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACTCAGTACCACTAAATTaGTGTGTTGCCGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNSVPLN*CVAAFE
Trigger: TTCAAATGCGGCAACACAGCAATTTAGTGGTACTGA...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGCCTCTTTACAGTTTTaGATTCTGCTGTGCCATTTG +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRASLQF*ILLCHL
Trigger: CAAATGGCACAGCAGAATGCAAAACTGTAAAGAGGC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATCCTCCATGTTCAGTTaGTGCATGGTAGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQSSMFS*CMVENL
Trigger: CAGGTTTTCTACCATGCAGCAACTGAACATGGAGGA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGCATCCTTTGAACAGTaGTTATCCTGCAAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQASFEQ*LSCKWV
Trigger: TACCCACTTGCAGGATAAGCACTGTTCAAAGGATGC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAGACTTCTGACTTCCTaGTTGTCCTGGTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNRLLTS*LSWFIL
Trigger: CAAGATGAACCAGGACAAGCAGGAAGTCAGAAGTCT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422737.6
ENST00000477947.1
CDS-3UTR GCA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGCAGCATCAGTACCTTTaGAGAAGTATTTACACAAAT +
Preference number: 4 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLQHQYL*RSIYTN
Trigger: ATTTGTGTAAATACTTCTGCAAAGGTACTGATGCTG...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATTTCACTCTAAGAATCTaGCTCCAAATTCAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNFTLRI*LQIQAE
Trigger: TTCAGCTTGAATTTGGAGGCAGATTCTTAGAGTGAA...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATTTCACTCTAAGAATCTaGCTCCAAATTCAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNFTLRI*LQIQAE
Trigger: TTCAGCTTGAATTTGGAGGCAGATTCTTAGAGTGAA...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACACCAATAGGAAGCTGTaGCTTTGGATTGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINTNRKL*LWIAWW
Trigger: CCACCAGGCAATCCAAAGCCACAGCTTCCTATTGGT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCAGTAATTGTAGGAAGATaGAATTGCACCAATAGGAAG +
Preference number: 4 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPVIVGR*NCTNRK
Trigger: CTTCCTATTGGTGCAATTCCATCTTCCTACAATTAC...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR CCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGCCTGCCCATTGCTACTaGAATCCTCCACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVPAHCY*NPPLSS
Trigger: TGAAGAGAGTGGAGGATTCCAGTAGCAATGGGCAGG...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTCATCTGAATGGGAAGTaGTATAGCCCTCCGTTTTAC +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSHLNGK*YSPPFY
Trigger: GTAAAACGGAGGGCTATACCACTTCCCATTCAGATG...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGTCAGATTTGAAGATTaGTTGGCAACAGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNVRFED*LATGVL
Trigger: GAGGACTCCTGTTGCCAACCAATCTTCAAATCTGAC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTGTCAGATTTGAAGATTaGTTGGCAACAGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGVRFED*LATGVL
Trigger: GAGGACTCCTGTTGCCAACCAATCTTCAAATCTGAC...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAACAGGAACTCCTGTCTaGGGTATGGAATTCTGGATA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQTGTPV*GMEFWI
Trigger: TATCCAGAATTCCATACCCCAGACAGGAGTTCCTGT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTACAGTATCTTGTGACTaGCTACCAGCTGATGTCTGT +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSTVSCD*LPADVC
Trigger: ACAGACATCAGCTGGTAGCCAGTCACAAGATACTGT...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTAGAAGGGAGAGGTTTTaGTGCAATGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSRRERF*CNVLKP
Trigger: GGGTTTCAGAACATTGCACCAAAACCTCTCCCTTCT...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAGAAGGGAGAGGTTTTaGTGCAATGTTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNRRERF*CNVLKP
Trigger: GGGTTTCAGAACATTGCACCAAAACCTCTCCCTTCT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATATCACTACGCTTTGTTaGGTTGGCTGCTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDITTLC*VGCCGC
Trigger: ACAACCACAGCAGCCAACCCAACAAAGCGTAGTGAT...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTGACCTTGTTGAGCTaGCTGGCTTACAATCACTAC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLTLLS*LAYNHY
Trigger: GTAGTGATTGTAAGCCAGCCAGCTCAACAAGGTCAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGAACTGTCTGACCAGCTaGAAGAGCTGCTGGATTAGC +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVNCLTS*KSCWIS
Trigger: GCTAATCCAGCAGCTCTTCCAGCTGGTCAGACAGTT...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGAAGTCCCTTGGAAAATaGTTGCTGGGCTATTTGAGA +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRKSLGK*LLGYLR
Trigger: TCTCAAATAGCCCAGCAACCATTTTCCAAGGGACTT...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATACTGTTATGGTTACCTaGTTGCCAGAAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDTVMVT*LPEVPW
Trigger: CCAAGGGACTTCTGGCAACCAGGTAACCATAACAGT...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTTGGCACAACTGTTATaGTTACCTGGTTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNLAQLL*LPGCQK
Trigger: CTTCTGGCAACCAGGTAACCATAACAGTTGTGCCAA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATTGCAAAACTCGTATTTaGCACAACTGTTATGGTTAC +
Preference number: 4 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNCKTRI*HNCYGY
Trigger: GTAACCATAACAGTTGTGCCAAATACGAGTTTTGCA...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATAGATGCTTGAGTGGCTaGAAGCGTTTGTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDRCLSG*KRLYWK
Trigger: CTTCCAGTACAAACGCTTCCAGCCACTCAAGCATCT...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTGTATCCCCATTGCTaGTGTTTGTGGCTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINLYPHC*CLWLLV
Trigger: GACGAGGAGCCACAAACACCAGCAATGGGGATACAA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTGATAGGGCAGGAGAATaGGATACTTTTGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGDRAGE*DTFDPE
Trigger: CTCAGGATCAAAAGTATCCCATTCTCCTGCCCTATC...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATATTCTGTACATATGTTaGTGGATGCTGTTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNILYIC*WMLLLL
Trigger: CAAAAGCAACAGCATCCACCAACATATGTACAGAAT...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGTGTGCCCCCTACAGTTaGCTGCTTGGTAGAAGACTT +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVCAPYS*LLGRRL
Trigger: AAGTCTTCTACCAAGCAGCCAACTGTAGGGGGCACA...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGACACAGCAGAAATGGTaGTTGGGAGGCCTTCCACAT +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVTQQKW*LGGLPH
Trigger: ATGTGGAAGGCCTCCCAACCACCATTTCTGCTGTGT...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACGAAGAAAAACCTAAGTaGGAAGCCATGATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNEEKPK*EAMISF
Trigger: GAAACTGATCATGGCTTCCCACTTAGGTTTTTCTTC...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACCAAATCCATTCTCCTaGTGTACCTTCATGAGACTT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQPNPFS*CTFMRL
Trigger: AAGTCTCATGAAGGTACATCAGGAGAATGGATTTGG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAGCTTTCGAGGTGGATaGAATAAAGACTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNSFRGG*NKDSQI
Trigger: GATTTGGGAGTCTTTATTTCATCCACCTCGAAAGCT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGTTTGTGCCACAGTATaGACACCTTGTACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQVCATV*TPCTGK
Trigger: TTTTCCTGTACAAGGTGTTCATACTGTGGCACAAAC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTGTTTGTGCCACAGTATaGACACCTTGTACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSVCATV*TPCTGK
Trigger: TTTTCCTGTACAAGGTGTTCATACTGTGGCACAAAC...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGTGGTGATTAACTGTTaGCCCTGTGAAACTGTAGAA +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNVVINC*PCETVE
Trigger: TTCTACAGTTTCACAGGGTCAACAGTTAATCACCAC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGCCAGCTGATGTCTGTTaGGATGAAGTTTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWPADVC*DEVCTG
Trigger: ACCTGTGCAAACTTCATCTCAACAGACATCAGCTGG...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGCTGTACCACTGTAGATaGAACTTGCTGAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWLYHCR*NLLRRE
Trigger: CTCCCTTCTCAGCAAGTTTCATCTACAGTGGTACAG...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTCACAGATAACATTTaGCTGACAGTAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQFTDNI*LTVGGG
Trigger: ACCACCTCCTACTGTCAGTCAAATGTTATCTGTGAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTGGCAGTATCTTGCTaGGTGATATCTAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLAVSC*VISKVP
Trigger: AGGGACTTTAGATATCACTCAGCAAGATACTGCCAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGGAACTGCTATGATTTaGTGTCCCTGTATAACAGAG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQGTAMI*CPCITE
Trigger: CTCTGTTATACAGGGACATCAAATCATAGCAGTTCC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATGCTGTTGCTTTTGCTaGACAGCACTTTCTATTGCT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQCCCFC*TALSIA
Trigger: AGCAATAGAAAGTGCTGTTCAGCAAAAGCAACAGCA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTTGCTGTTGCTTTTGCTaGACAGCACTTTCTATTGCT +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSCCCFC*TALSIA
Trigger: AGCAATAGAAAGTGCTGTTCAGCAAAAGCAACAGCA...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGTTGGTAGAAGACTTCTaGCTTCCTGCTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWLVEDF*LPACPG
Trigger: ACCAGGACAAGCAGGAAGTCAGAAGTCTTCTACCAA...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGAGTGCAGCACTGGGATaGTTCACAATGGCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVSAALG*FTMAFC
Trigger: ACAAAAGGCCATTGTGAATCATCCCAGTGCTGCACT...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACAGTGCAGCACTGGGATaGTTCACAATGGCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINSAALG*FTMAFC
Trigger: ACAAAAGGCCATTGTGAATCATCCCAGTGCTGCACT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGATGGTACTGAATTCTaGTCATACCAGTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRDGTEF*SYQFPS
Trigger: TGATGGAAACTGGTATGATCAGAATTCAGTACCATC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTGACAATTTAAGGAAGTaGGCAGTTTCTGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGDNLRK*AVSEQE
Trigger: TTCCTGCTCAGAAACTGCTCACTTCCTTAAATTGTC...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTCCTCCAAATTCAAGCTaGAGATTTGGATACACTGTG +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSPPNSS*RFGYTV
Trigger: CACAGTGTATCCAAATCTTCAGCTTGAATTTGGAGG...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGAGAAAATTCCCCATATaGTGTCAACTACCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKRKFPI*CQLPGA
Trigger: AGCACCTGGTAGTTGACATCATATGGGGAATTTTCT...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTCACGAGCTAATTTACTaGAAGTCGAGAGGTATTCAG +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSHELIY*KSRGIQ
Trigger: CTGAATACCTCTCGACTTGCAGTAAATTAGCTCGTG...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGTGTGTAATGGAGACTaGTGTGGAATTACAGATGGA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQVCNGD*CGITDG
Trigger: TCCATCTGTAATTCCACAGCAGTCTCCATTACACAC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACTACATACTGTGGGGGTaGTATGATAACAGTATCTTG +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYYILWG*YDNSIL
Trigger: CAAGATACTGTTATCATAGCACCCCCACAGTATGTA...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGAATGTTGCTGCTGTTaGTGCCTTTTCACAGATAAC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQECCCC*CLFTDN
Trigger: GTTATCTGTGAAAAGGCAGCAACAGCAGCAACATTC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTATGGTTACCTGGTTaGCAGAAGTCCCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLWLPG*QKSLGK
Trigger: TTTTCCAAGGGACTTCTGGCAACCAGGTAACCATAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACGCTCATGGTAATTCCTaGTGGAGCAATGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINAHGNS*WSNELS
Trigger: ACTCAGCTCATTGCTCCAGCAGGAATTACCATGAGC...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACAAGCCTCCTGTATACTaGTCACAGATGAACCACCCA +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINKPPVY*SQMNHP
Trigger: TGGGTGGTTCATCTGTGAGCAGTATACAGGAGGCTT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTGCCTCTTTACAGTTTTaGATTCTGCTGTGCCATTTG +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSASLQF*ILLCHL
Trigger: CAAATGGCACAGCAGAATGCAAAACTGTAAAGAGGC...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGCCTCTTTACAGTTTTaGATTCTGCTGTGCCATTTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQASLQF*ILLCHL
Trigger: CAAATGGCACAGCAGAATGCAAAACTGTAAAGAGGC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACCTATCAGTATCCTCTaGTGGCCTCTTTACAGTTTT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQPISIL*WPLYSF
Trigger: AAAACTGTAAAGAGGCCAGCAGAGGATACTGATAGG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTCCTATCAGTATCCTCTaGTGGCCTCTTTACAGTTTT +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSPISIL*WPLYSF
Trigger: AAAACTGTAAAGAGGCCAGCAGAGGATACTGATAGG...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACAACAGCACTTTCTATTaGTACTTTAGCTACAGTGCT +
Preference number: 4 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNNSTFY*YFSYSA
Trigger: AGCACTGTAGCTAAAGTAGCAATAGAAAGTGCTGTT...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACCTTCCCAAAGACACTaGCCTGGATATACATCTTTT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQPSQRH*PGYTSF
Trigger: AAAAGATGTATATCCAGGGCAGTGTCTTTGGGAAGG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTGCTAGAACTACAGCATaGAATTCAATGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGARTTA*NSMRWK
Trigger: CTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGC...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGTTGATGACTGGAACTTaGGTGTTCAATGAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLLMTGT*VFNEFY
Trigger: GTAAAACTCATTGAACACCCAAGTTCCAGTCATCAA...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTTGAATGACAGTCACTaGAGCATTTTGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNLNDSH*SILLLV
Trigger: CACCAGCAACAAAATGCTCCAGTGACTGTCATTCAA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTAACTGTAACAGGTTGTaGCCCTGTACTATGATTCTG +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSNCNRL*PCTMIL
Trigger: CAGAATCATAGTACAGGGCCACAACCTGTTACAGTT...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAACTGTAACAGGTTGTaGCCCTGTACTATGATTCTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQNCNRL*PCTMIL
Trigger: CAGAATCATAGTACAGGGCCACAACCTGTTACAGTT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTGTAGAAGTACATGCTaGTATGTTCTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKCRSTC*YVLYSA
Trigger: GGCAGAGTACAGAACATACCAGCATGTACTTCTACA...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTTGTAGAAGTACATGCTaGTATGTTCTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSCRSTC*YVLYSA
Trigger: GGCAGAGTACAGAACATACCAGCATGTACTTCTACA...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATTTGCTGAGACAATATTaGATGCAGAAGTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNLLRQY*MQKLLH
Trigger: ATGTAACAACTTCTGCATCCAATATTGTCTCAGCAA...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACAATTTGGTGAATGGCTaGTGCATAAGTTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYNLVNG*CISLTL
Trigger: CAAGGTCAAACTTATGCACCAGCCATTCACCAAATT...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGAACAATTTGGTGAATaGCTGGTGCATAAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFREQFGE*LVHKFD
Trigger: GTCAAACTTATGCACCAGCCATTCACCAAATTGTTC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGGGGTGGCATTGCACTTaGGACCAACTGAACATTTTG +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWGWHCT*DQLNIL
Trigger: CAAAATGTTCAGTTGGTCCCAAGTGCAATGCCACCC...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAAGTCCCTTGGAAAATaGTTGCTGGGCTATTTGAGA +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNKSLGK*LLGYLR
Trigger: TCTCAAATAGCCCAGCAACCATTTTCCAAGGGACTT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGTGCAAAACTCGTATTTaGCACAACTGTTATGGTTAC +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLCKTRI*HNCYGY
Trigger: GTAACCATAACAGTTGTGCCAAATACGAGTTTTGCA...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGCATGGTAATTCCTGCTaGAGCAATGAGCTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWHGNSC*SNELSC
Trigger: GCAACTCAGCTCATTGCTCCAGCAGGAATTACCATG...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGTGGAAGCGTTTGTACTaGAAGTCCAACTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVWKRLY*KSNSCL
Trigger: CAGACAGGAGTTGGACTTCCAGTACAAACGCTTCCA...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAATCAGTATCCTCTGCTaGCCTCTTTACAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQISILC*PLYSFA
Trigger: TGCAAAACTGTAAAGAGGCCAGCAGAGGATACTGAT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGATTCTGTACATATGTTaGTGGATGCTGTTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLILYIC*WMLLLL
Trigger: CAAAAGCAACAGCATCCACCAACATATGTACAGAAT...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTCCAGGTTTTCTCATTaGATCTCCAGGCTGACTGGA +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINSRFSH*ISRLTG
Trigger: TCCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACTGCTTATCCTGCAAGTaGGTAATAAAAGAAAACCGC +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYCLSCK*VIKENR
Trigger: GCGGTTTTCTTTTATTACCCACTTGCAGGATAAGCA...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTCCCCCACTGTGTAAGTaGAATTATTTTTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGPPLCK*NYFSLQ
Trigger: CTGCAGTGAAAAATAATTCCACTTACACAGTGGGGG...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGATCCTGCAGATAAGCTaGTTGACAATCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWILQIS*LTIPQQ
Trigger: CTGCTGTGGGATTGTCAACCAGCTTATCTGCAGGAT...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGGGCCTTCCACATTTTTaGATGCTAATAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKGLPHF*MLIEQA
Trigger: TGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCC...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTGGCCTTCCACATTTTTaGATGCTAATAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSGLPHF*MLIEQA
Trigger: TGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCC...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATTGCAATTCAATGAGGTaGAAGAATGGTGAATATGAA +
Preference number: 4 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNCNSMR*KNGEYE
Trigger: TTCATATTCACCATTCTTCCACCTCATTGAATTGCA...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGAAGAAAAACCTAAGTaGGAAGCCATGATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFREEKPK*EAMISF
Trigger: GAAACTGATCATGGCTTCCCACTTAGGTTTTTCTTC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGACGAGTTCTCAGGTGTaGGTTGGATTACTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWTSSQV*VGLLSL
Trigger: GAGACTCAGTAATCCAACCCACACCTGAGAACTCGT...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTTTAAGAGCTCATCATaGCCTGACCTAGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNFKSSS*PDLGIN
Trigger: GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422737.6
ENST00000477947.1
CDS-3UTR TCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGTTTACTCCTACCACATaGATATGTGCCTGCCCATTG +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVFTPTT*ICACPL
Trigger: CAATGGGCAGGCACATATTCATGTGGTAGGAGTAAA...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGGCAACAGGAGTCCTCTaGAAATGGTTTCCTATGGTT +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWATGVL*KWFPMV
Trigger: AACCATAGGAAACCATTTTCAGAGGACTCCTGTTGC...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATGTCCTGTAGCTACCTaGAAATTCTGTACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQCPVAT*KFCTEV
Trigger: AACTTCAGTACAGAATTTTCAGGTAGCTACAGGACA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACGTAGATGAAACTTGCTaGGAAGGGAGAGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINVDETC*EGRGFG
Trigger: ACCAAAACCTCTCCCTTCTCAGCAAGTTTCATCTAC...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATCAGTATCTTGCTGAGTaGTATCTAAAGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDQYLAE*YLKSLV
Trigger: CACAAGGGACTTTAGATATCACTCAGCAAGATACTG...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATTGCTGTTGCTTTTGCTaGACAGCACTTTCTATTGCT +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDCCCFC*TALSIA
Trigger: AGCAATAGAAAGTGCTGTTCAGCAAAAGCAACAGCA...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACACCTGTGAGGGTGTCTaGAACCACTTTTTACAAGAC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINTCEGV*NHFLQD
Trigger: GTCTTGTAAAAAGTGGTTTCAGACACCCTCACAGGT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGAACTTGGGTGTTCAATaGGTTTTACCGCAGCTATGC +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVNLGVQ*VLPQLC
Trigger: GCATAGCTGCGGTAAAACTCATTGAACACCCAAGTT...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444670.5
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACGTAGGAAGATGGAATTaGACCAATAGGAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINVGRWN*TNRKLW
Trigger: CCACAGCTTCCTATTGGTGCAATTCCATCTTCCTAC...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACACAGGTACGATTAGCTaGCAAGAGCTTAACATTGCC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINTGTIS*QELNIA
Trigger: GGCAATGTTAAGCTCTTGGCAGCTAATCGTACCTGT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACAGGGAGAGGTTTTGGTaGAATGTTCTGAAACCCTAC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINRERFW*NVLKPY
Trigger: GTAGGGTTTCAGAACATTGCACCAAAACCTCTCCCT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGACTCACAGTTGCAGGTaGAAAACTCGTATTTGGCAC +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWTHSCR*KTRIWH
Trigger: GTGCCAAATACGAGTTTTGCACCTGCAACTGTGAGT...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTCCCTGACTCACAGTTaGAGGTGCAAAACTCGTATT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINSLTHS*RCKTRI
Trigger: AATACGAGTTTTGCACCTGCAACTGTGAGTCAGGGA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGTCCCTGACTCACAGTTaGAGGTGCAAAACTCGTATT +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWSLTHS*RCKTRI
Trigger: AATACGAGTTTTGCACCTGCAACTGTGAGTCAGGGA...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTTCAGTACCACTAAATTaGTGTGTTGCCGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGSVPLN*CVAAFE
Trigger: TTCAAATGCGGCAACACAGCAATTTAGTGGTACTGA...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACACTTTTTACAAGACTaGCACAGACACATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQHFLQD*HRHMKF
Trigger: GAACTTCATGTGTCTGTGGCAGTCTTGTAAAAAGTG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACAGACTTCTGACTTCCTaGTTGTCCTGGTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINRLLTS*LSWFIL
Trigger: CAAGATGAACCAGGACAAGCAGGAAGTCAGAAGTCT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTACAGCATCAGTACCTTTaGAGAAGTATTTACACAAAT +
Preference number: 4 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLQHQYL*RSIYTN
Trigger: ATTTGTGTAAATACTTCTGCAAAGGTACTGATGCTG...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGCTTCTCCAAATACAGTaGAAAAGGATCCTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRLLQIQ*KRILKC
Trigger: ACACTTTAGGATCCTTTTCCACTGTATTTGGAGAAG...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCATCTGAATGGGAAGTaGTATAGCCCTCCGTTTTAC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINHLNGK*YSPPFY
Trigger: GTAAAACGGAGGGCTATACCACTTCCCATTCAGATG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTTGGGGTATGGAATTCTaGATAACTGTAGCCTTAACA +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGWGMEF*ITVALT
Trigger: TGTTAAGGCTACAGTTATCCAGAATTCCATACCCCA...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATAACTGTAACAGGTTGTaGCCCTGTACTATGATTCTG +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDNCNRL*PCTMIL
Trigger: CAGAATCATAGTACAGGGCCACAACCTGTTACAGTT...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGAAACATATGACTCTGTaGGACAGCTTGTTGAATTAC +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRKHMTL*DSLLNY
Trigger: GTAATTCAACAAGCTGTCCCACAGAGTCATATGTTT...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACACAGTATCTTGTGACTaGCTACCAGCTGATGTCTGT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINTVSCD*LPADVC
Trigger: ACAGACATCAGCTGGTAGCCAGTCACAAGATACTGT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAGTTGTTACATACTGTaGGGGTGCTATGATAACAGT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQSCYIL*GCYDNS
Trigger: ACTGTTATCATAGCACCCCCACAGTATGTAACAACT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTACGCTTTGTTGGGTTaGCTGCTGTGGTTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINYALLG*LLWLLN
Trigger: ATTCAACAACCACAGCAGCCAACCCAACAAAGCGTA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTTGGTGAATGGCTaGTGCATAAGTTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQNLVNG*CISLTL
Trigger: CAAGGTCAAACTTATGCACCAGCCATTCACCAAATT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGAACAATTTGGTGAATaGCTGGTGCATAAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQEQFGE*LVHKFD
Trigger: GTCAAACTTATGCACCAGCCATTCACCAAATTGTTC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACATGGCAGTAGGGACTTaGTTATTAGTAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINMAVGT*LLVAGT
Trigger: TGTCCCAGCTACTAATAACCAAGTCCCTACTGCCAT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGATGGCAGTAGGGACTTaGTTATTAGTAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWMAVGT*LLVAGT
Trigger: TGTCCCAGCTACTAATAACCAAGTCCCTACTGCCAT...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTTTATCACCTTTGAATaGGGGAGTAGCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNFITFE*GSSSST
Trigger: TGTACTACTGCTACTCCCCCATTCAAAGGTGATAAA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCCCTTGTGGTTCCATTaGAGATATCTCACCATTTCC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINPLWFH*RYLTIS
Trigger: GGAAATGGTGAGATATCTCCAATGGAACCACAAGGG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGGATAGGGCAGGAGAATaGGATACTTTTGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWDRAGE*DTFDPE
Trigger: CTCAGGATCAAAAGTATCCCATTCTCCTGCCCTATC...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACGATAGGGCAGGAGAATaGGATACTTTTGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINDRAGE*DTFDPE
Trigger: CTCAGGATCAAAAGTATCCCATTCTCCTGCCCTATC...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATGCTTATCCTGCAAGTaGGTAATAAAAGAAAACCGC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQCLSCK*VIKENR
Trigger: GCGGTTTTCTTTTATTACCCACTTGCAGGATAAGCA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTGAAGAAAAACCTAAGTaGGAAGCCATGATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGEEKPK*EAMISF
Trigger: GAAACTGATCATGGCTTCCCACTTAGGTTTTTCTTC...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TTGGCTACAGAAAACATATTACTCACCTGCGACCACATTCTGAATATTTACCAATTTAAGAGCTCATCATaGCCTGACCTAGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: LATENILLTCDHILNIYQFKSSS*PDLGIN
Trigger: GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA...TTGGTAAATATTCAGAATGTGGTCGCAGGTGAGTAATATGTTTTCTGTAGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477947.1
3UTR CAA 72 bp CTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTaGAGTCCCCCACTGTGTAAGTGGAATTATTTTTCA +
Preference number: 4 (lower is better)
Translates to: LSSVTVCEMWLT*SPPLCKWNYFS
Trigger: TGAAAAATAATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457135.1
CDS-3UTR TCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTAACTTCTGGGAAAGTTaGACTCTTCAACAATTTCTC +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSNFWES*TLQQFL
Trigger: GAGAAATTGTTGAAGAGTTCAACTTTCCCAGAAGTT...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTCAGGGCCAAACATCTaGATATCCATAGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINSGPNI*ISIETR
Trigger: TCTGGTTTCTATGGATATTCAGATGTTTGGCCCTGA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAATTTTGTGGAATTCTTaGAACAGTTTGTGCCACAGT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQILWNS*NSLCHS
Trigger: ACTGTGGCACAAACTGTTTCAAGAATTCCACAAAAT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACATTGGAGCTTTACTTTaGATGACAGTCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINIGALL*MTVTGA
Trigger: TGCTCCAGTGACTGTCATTCAAAGTAAAGCTCCAAT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGATTGGAGCTTTACTTTaGATGACAGTCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVIGALL*MTVTGA
Trigger: TGCTCCAGTGACTGTCATTCAAAGTAAAGCTCCAAT...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCAGTATCTTGCTGAGTaGTATCTAAAGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINQYLAE*YLKSLV
Trigger: CACAAGGGACTTTAGATATCACTCAGCAAGATACTG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGTTGGCAGTATCTTGCTaGGTGATATCTAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWLAVSC*VISKVP
Trigger: AGGGACTTTAGATATCACTCAGCAAGATACTGCCAA...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGGACAATTTAAGGAAGTaGGCAGTTTCTGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVDNLRK*AVSEQE
Trigger: TTCCTGCTCAGAAACTGCTCACTTCCTTAAATTGTC...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGCAGCATGCAATTCAATaGGGTGGAAGAATGGTGAAT +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWQHAIQ*GGRMVN
Trigger: ATTCACCATTCTTCCACCTCATTGAATTGCATGCTG...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGGCACCTTTTCATGAATaGGAGGGTTTTGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVAPFHE*EGFAEL
Trigger: AAGTTCTGCAAAACCCTCTCATTCATGAAAAGGTGC...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATATTTCTCAAAATCACTaGAATCTGAAGTACCCGCTG +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDISQNH*NLKYPL
Trigger: CAGCGGGTACTTCAGATTGCAGTGATTTTGAGAAAT...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCACGAGCTAATTTACTaGAAGTCGAGAGGTATTCAG +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINHELIY*KSRGIQ
Trigger: CTGAATACCTCTCGACTTGCAGTAAATTAGCTCGTG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGTTATGGTTACCTGGTTaGCAGAAGTCCCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWLWLPG*QKSLGK
Trigger: TTTTCCAAGGGACTTCTGGCAACCAGGTAACCATAA...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTTTATTTGGAATTCCTaGGACTGTTTCCCTATCAGT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNFIWNS*DCFPIS
Trigger: ACTGATAGGGAAACAGTCGCAGGAATTCCAAATAAA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAACAGCACTTTCTATTaGTACTTTAGCTACAGTGCT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNNSTFY*YFSYSA
Trigger: AGCACTGTAGCTAAAGTAGCAATAGAAAGTGCTGTT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGCCTTCCCAAAGACACTaGCCTGGATATACATCTTTT +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWPSQRH*PGYTSF
Trigger: AAAAGATGTATATCCAGGGCAGTGTCTTTGGGAAGG...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACCAGCATCAGTACCTTTaGAGAAGTATTTACACAAAT +
Preference number: 4 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYQHQYL*RSIYTN
Trigger: ATTTGTGTAAATACTTCTGCAAAGGTACTGATGCTG...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTTTCACTCTAAGAATCTaGCTCCAAATTCAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSFTLRI*LQIQAE
Trigger: TTCAGCTTGAATTTGGAGGCAGATTCTTAGAGTGAA...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGGCTAGAACTACAGCATaGAATTCAATGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVARTTA*NSMRWK
Trigger: CTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGC...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGTAATTGTAGGAAGATaGAATTGCACCAATAGGAAG +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNVIVGR*NCTNRK
Trigger: CTTCCTATTGGTGCAATTCCATCTTCCTACAATTAC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACTTCTCCAAATACAGTaGAAAAGGATCCTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLLQIQ*KRILKC
Trigger: ACACTTTAGGATCCTTTTCCACTGTATTTGGAGAAG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATCTTCACTGTATGATTTaGAAAGACCGTTCTAAGACA +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNLHCMI*KDRSKT
Trigger: TGTCTTAGAACGGTCTTTCCAAATCATACAGTGAAG...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGTTGAATGACAGTCACTaGAGCATTTTGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVLNDSH*SILLLV
Trigger: CACCAGCAACAAAATGCTCCAGTGACTGTCATTCAA...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTGTAGAAGTACATGCTaGTATGTTCTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINCRSTC*YVLYSA
Trigger: GGCAGAGTACAGAACATACCAGCATGTACTTCTACA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATAATTTGGTGAATGGCTaGTGCATAAGTTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDNLVNG*CISLTL
Trigger: CAAGGTCAAACTTATGCACCAGCCATTCACCAAATT...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGTTTGTAAGTTCGAAATaGGCACAGTTTGTACTCCCC +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWFVSSK*AQFVLP
Trigger: GGGGAGTACAAACTGTGCCCATTTCGAACTTACAAA...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTGTAAGTTCGAAATaGGCACAGTTTGTACTCCCC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINFVSSK*AQFVLP
Trigger: GGGGAGTACAAACTGTGCCCATTTCGAACTTACAAA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATGCAAAACTCGTATTTaGCACAACTGTTATGGTTAC +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQCKTRI*HNCYGY
Trigger: GTAACCATAACAGTTGTGCCAAATACGAGTTTTGCA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGAACTCCTACTTTATTTaGAATTCCTGCGACTGTTTC +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKNSYFI*NSCDCF
Trigger: GAAACAGTCGCAGGAATTCCAAATAAAGTAGGAGTT...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAATTCTGTACATATGTTaGTGGATGCTGTTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQILYIC*WMLLLL
Trigger: CAAAAGCAACAGCATCCACCAACATATGTACAGAAT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTATTCTGTACATATGTTaGTGGATGCTGTTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGILYIC*WMLLLL
Trigger: CAAAAGCAACAGCATCCACCAACATATGTACAGAAT...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGTGCAATTCAATGAGGTaGAAGAATGGTGAATATGAA +
Preference number: 4 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRCNSMR*KNGEYE
Trigger: TTCATATTCACCATTCTTCCACCTCATTGAATTGCA...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACACTCTCTTCACTGTATaGTTTGGAAAGACCGTTCTA +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINTLFTV*FGKTVL
Trigger: TAGAACGGTCTTTCCAAATCATACAGTGAAGAGAGT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGACTCTCTTCACTGTATaGTTTGGAAAGACCGTTCTA +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVTLFTV*FGKTVL
Trigger: TAGAACGGTCTTTCCAAATCATACAGTGAAGAGAGT...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACATTTCTCAAAATCACTaGAATCTGAAGTACCCGCTG +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINISQNH*NLKYPL
Trigger: CAGCGGGTACTTCAGATTGCAGTGATTTTGAGAAAT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACGTATGTTCTGTACTCTaGCAAACATATGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINVCSVL*QTYDSV
Trigger: CACAGAGTCATATGTTTGGCAGAGTACAGAACATAC...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGGTATGTTCTGTACTCTaGCAAACATATGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVVCSVL*QTYDSV
Trigger: CACAGAGTCATATGTTTGGCAGAGTACAGAACATAC...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTACATACTGTGGGGGTaGTATGATAACAGTATCTTG +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINYILWG*YDNSIL
Trigger: CAAGATACTGTTATCATAGCACCCCCACAGTATGTA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTCAGTACCACTAAATTaGTGTGTTGCCGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINSVPLN*CVAAFE
Trigger: TTCAAATGCGGCAACACAGCAATTTAGTGGTACTGA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAACATATTACTCACCTaGGACCACATTCTGAATATT +
Preference number: 4 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQNILLT*DHILNI
Trigger: AATATTCAGAATGTGGTCGCAGGTGAGTAATATGTT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422737.6
ENST00000477947.1
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTGGGGTATGGAATTCTaGATAACTGTAGCCTTAACA +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINWGMEF*ITVALT
Trigger: TGTTAAGGCTACAGTTATCCAGAATTCCATACCCCA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTTGCTGAGACAATATTaGATGCAGAAGTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNLLRQY*MQKLLH
Trigger: ATGTAACAACTTCTGCATCCAATATTGTCTCAGCAA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGTGCTTATCCTGCAAGTaGGTAATAAAAGAAAACCGC +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWCLSCK*VIKENR
Trigger: GCGGTTTTCTTTTATTACCCACTTGCAGGATAAGCA...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTTCAAGCTGAAGATTTaGATACACTGTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKFKLKI*IHCDSE
Trigger: TTCAGAATCACAGTGTATCCAAATCTTCAGCTTGAA...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTTTCAAGCTGAAGATTTaGATACACTGTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSFKLKI*IHCDSE
Trigger: TTCAGAATCACAGTGTATCCAAATCTTCAGCTTGAA...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTTTCAAGCTGAAGATTTaGATACACTGTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: YSRKARTTACNSMRWKNGFKLKI*IHCDSE
Trigger: TTCAGAATCACAGTGTATCCAAATCTTCAGCTTGAA...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACAACTTCTGGGAAAGTTaGACTCTTCAACAATTTCTC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINNFWES*TLQQFL
Trigger: GAGAAATTGTTGAAGAGTTCAACTTTCCCAGAAGTT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGTGTTTCTGTCAGAAATaGGGTCACGAACTTCATTAT +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVCFCQK*GHELHY
Trigger: ATAATGAAGTTCGTGACCTCATTTCTGACAGAAACA...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR TCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTGTTTCTGTCAGAAATaGGGTCACGAACTTCATTAT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINCFCQK*GHELHY
Trigger: ATAATGAAGTTCGTGACCTCATTTCTGACAGAAACA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR TCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGATTTTGTGGAATTCTTaGAACAGTTTGTGCCACAGT +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVILWNS*NSLCHS
Trigger: ACTGTGGCACAAACTGTTTCAAGAATTCCACAAAAT...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGAACTGTAGAAGTACATaGTGGTATGTTCTGTACTCT +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWNCRST*WYVLYS
Trigger: AGAGTACAGAACATACCAGCATGTACTTCTACAGTT...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR GCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACAACTGTAGAAGTACATaGTGGTATGTTCTGTACTCT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINNCRST*WYVLYS
Trigger: AGAGTACAGAACATACCAGCATGTACTTCTACAGTT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR GCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGTTTATTTGGAATTCCTaGGACTGTTTCCCTATCAGT +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVFIWNS*DCFPIS
Trigger: ACTGATAGGGAAACAGTCGCAGGAATTCCAAATAAA...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR GCA 90 bp AAACTAAATTCACTTTGGCTACAGAAAACATATTACTCACCTGCGACCACATTCAACATATTACTCACCTaGGACCACATTCTGAATATT +
Preference number: 4 (lower is better)
Translates to: KLNSLWLQKTYYSPATTFNILLT*DHILNI
Trigger: AATATTCAGAATGTGGTCGCAGGTGAGTAATATGTT...GAATGTGGTCGCAGGTGAGTAATATGTTTTCTGTAGCCAAAGTGAATTTAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477947.1
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTGATGACTGGAACTTaGGTGTTCAATGAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINLMTGT*VFNEFY
Trigger: GTAAAACTCATTGAACACCCAAGTTCCAGTCATCAA...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGTTGATGACTGGAACTTaGGTGTTCAATGAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWLMTGT*VFNEFY
Trigger: GTAAAACTCATTGAACACCCAAGTTCCAGTCATCAA...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACAACAGAAGTAGAAACTaGTTGCTGCTGATAGTACAT +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINNRSRN*LLLIVH
Trigger: ATGTACTATCAGCAGCAACCAGTTTCTACTTCTGTT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACAAACATATGACTCTGTaGGACAGCTTGTTGAATTAC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINKHMTL*DSLLNY
Trigger: GTAATTCAACAAGCTGTCCCACAGAGTCATATGTTT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACAACTCCTACTTTATTTaGAATTCCTGCGACTGTTTC +
Preference number: 4 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINNSYFI*NSCDCF
Trigger: GAAACAGTCGCAGGAATTCCAAATAAAGTAGGAGTT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CCA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGAACTCCTACTTTATTTaGAATTCCTGCGACTGTTTC +
Preference number: 4 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVNSYFI*NSCDCF
Trigger: GAAACAGTCGCAGGAATTCCAAATAAAGTAGGAGTT...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CCA 90 bp AAACTAAATTCACTTTGGCTACAGAAAACATATTACTCACCTGCGACCACATTCGATGTGTTTAGTTATTaGTCCCTCTTTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: KLNSLWLQKTYYSPATTFDVFSY*SLFFIL
Trigger: AAGGATGAAAAAGAGGGACCAATAACTAAACACATC...GAATGTGGTCGCAGGTGAGTAATATGTTTTCTGTAGCCAAAGTGAATTTAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477947.1
CDS-3UTR GCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGCTTCATTCATGTTTCTaGGACCACATTCTGAATATT +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWLHSCF*DHILNI
Trigger: AATATTCAGAATGTGGTCGCAGAAACATGAATGAAG...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457135.1
CDS-3UTR CCA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGTGCAATTCAATGAGGTaGAAGAATGGTGAATATGAA +
Preference number: 4 (lower is better)
Translates to: KTKLLISKQNTRSIARYWCNSMR*KNGEYE
Trigger: TTCATATTCACCATTCTTCCACCTCATTGAATTGCA...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGCTGCTGAGCTGGAGTTaGCCCCTGCACTCCAAAACC +
Preference number: 5 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQLLSWS*PLHSKT
Trigger: GGTTTTGGAGTGCAGGGGCAAACTCCAGCTCAGCAG...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGGCGCTGCAGCCAGCATaGTTGGGGTCACTGATTGTA +
Preference number: 5 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGALQPA*LGSLIV
Trigger: TACAATCAGTGACCCCAACAATGCTGGCTGCAGCGC...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGGTGAGACAACTACACTaGGGCGTTGCTGAGGCACAT +
Preference number: 5 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGVRQLH*GVAEAH
Trigger: ATGTGCCTCAGCAACGCCCAAGTGTAGTTGTCTCAC...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTCTGGCACAGCAACCATaGTTGCGCTGCAGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSLAQQP*LRCSQH
Trigger: ATGCTGGCTGCAGCGCAACAATGGTTGCTGTGCCAG...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGGTCCAGGTTTTCTCATaGGATCTCCAGGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGVQVFS*DLQADW
Trigger: CCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGAC...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTGTTGCCAGAAGTCCCTaGGAAAATGGTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSVARSP*ENGCWA
Trigger: AGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAAC...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGCAGGTGCTTGTAAGTTaGAGGGCTCTGAAGGCCATC +
Preference number: 5 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQQVLVS*RALKAI
Trigger: GATGGCCTTCAGAGCCCTCAAACTTACAAGCACCTG...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS TCA 90 bp AGAAGGCTGAGAACTGTTAGGCTGGCCCTGCACTTGTACAGCTGGTaGAGGTGGCATAGGAGTGTTCTGCGGGACCACATTCTGTACATA +
Preference number: 5 (lower is better)
Translates to: RRLRTVRLALHLYSW*RWHRSVLRDHILYI
Trigger: TATGTACAGAATGTGGTCCCGCAGAACACTCCTATGCCACCTTCACCAGCTGTACAAGTGCAGGGCCAGCCTAACAGTTCTCAGCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS CCA 90 bp TGGAAGTCCAACTCCTGTCTGCGTTCCGCTCATGGTAATTCCTGCTaGAGCAATGAGCTGAGTTGCATTTCCCTGACTCACAGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: WKSNSCLRSAHGNSC*SNELSCISLTHSCR
Trigger: CCTGCAACTGTGAGTCAGGGAAATGCAACTCAGCTCATTGCTCCAGCAGGAATTACCATGAGCGGAACGCAGACAGGAGTTGGACTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS-3UTR CAA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATCCCCATTGCTGGTGTTaGTGGCTCCTCGTCGGCAGG +
Preference number: 5 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNPHCWC*WLLVGR
Trigger: CCTGCCGACGAGGAGCCACAAACACCAGCAATGGGG...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS TCA 90 bp TGCAGCACTGGGATGATTCACAATGGCCTTTTGTGCTCTAGGAGTTaGGCTTGTGCCCCCTACAGTTGGCTGCTTGGTAGAAGACTTCTG +
Preference number: 5 (lower is better)
Translates to: CSTGMIHNGLLCSRS*ACAPYSWLLGRRLL
Trigger: CAGAAGTCTTCTACCAAGCAGCCAACTGTAGGGGGCACAAGCTCAACTCCTAGAGCACAAAAGGCCATTGTGAATCATCCCAGTGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000477947.1
ENST00000479608.5
CDS GCA 90 bp TTGGTTACTGGCCACCTGATAGACCACCTGAGGGCTAGGAGCTCTTaGATTATTAGGGGGAGGAATCTGTGGAGCTGGGAGAATAAGCTT +
Preference number: 5 (lower is better)
Translates to: LVTGHLIDHLRARSS*IIRGRNLWSWENKL
Trigger: AAGCTTATTCTCCCAGCTCCACAGATTCCTCCCCCTAATAATGCAAGAGCTCCTAGCCCTCAGGTGGTCTATCAGGTGGCCAGTAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS GCA 90 bp TACTGGAAGTCCAACTCCTGTCTGCGTTCCGCTCATGGTAATTCCTaGTGGAGCAATGAGCTGAGTTGCATTTCCCTGACTCACAGTTGC +
Preference number: 5 (lower is better)
Translates to: YWKSNSCLRSAHGNS*WSNELSCISLTHSC
Trigger: GCAACTGTGAGTCAGGGAAATGCAACTCAGCTCATTGCTCCAGCAGGAATTACCATGAGCGGAACGCAGACAGGAGTTGGACTTCCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS GCA 90 bp AGCACTTTCTATTGCTACTTTAGCTACAGTGCTTGGATCTGCTCCTaGTGGCACAGCAACCATTGTTGCGCTGCAGCCAGCATTGTTGGG +
Preference number: 5 (lower is better)
Translates to: STFYCYFSYSAWICS*WHSNHCCAAASIVG
Trigger: CCCAACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTGCCAGCAGGAGCAGATCCAAGCACTGTAGCTAAAGTAGCAATAGAAAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS CCA 90 bp ACTTTCTATTGCTACTTTAGCTACAGTGCTTGGATCTGCTCCTGCTaGCACAGCAACCATTGTTGCGCTGCAGCCAGCATTGTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: TFYCYFSYSAWICSC*HSNHCCAAASIVGV
Trigger: GACCCCAACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTGCCAGCAGGAGCAGATCCAAGCACTGTAGCTAAAGTAGCAATAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS-3UTR CAA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTTGCATCTGTACTTGTaGGGGCTGCTGAACTTGTAC +
Preference number: 5 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSLHLYL*GLLNLY
Trigger: GTACAAGTTCAGCAGCCCCAACAAGTACAGATGCAA...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGCTGCTGAGCTGGAGTTaGCCCCTGCACTCCAAAACC +
Preference number: 5 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQLLSWS*PLHSKT
Trigger: GGTTTTGGAGTGCAGGGGCAAACTCCAGCTCAGCAG...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGCCCCTGAGGGTGGCATaGCACTTGGGACCAACTGAA +
Preference number: 5 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQPLRVA*HLGPTE
Trigger: TTCAGTTGGTCCCAAGTGCAATGCCACCCTCAGGGG...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACCCCCATTGCTGGTGTTaGTGGCTCCTCGTCGGCAGG +
Preference number: 5 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNPHCWC*WLLVGR
Trigger: CCTGCCGACGAGGAGCCACAAACACCAGCAATGGGG...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGTTGAAGGAGGTAGACTaGAGTCACTGTACTTTCTCC +
Preference number: 5 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGLKEVD*SHCTFS
Trigger: GGAGAAAGTACAGTGACTCAAGTCTACCTCCTTCAA...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGCTGGCACAGCAACCATaGTTGCGCTGCAGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLLAQQP*LRCSQH
Trigger: ATGCTGGCTGCAGCGCAACAATGGTTGCTGTGCCAG...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCATGGGCAGTGCCAGTCTaGGAAGGTGGGCCAAGCATA +
Preference number: 5 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSWAVPV*EGGPSI
Trigger: TATGCTTGGCCCACCTTCCAAGACTGGCACTGCCCA...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGTGGGCAGTGCCAGTCTaGGAAGGTGGGCCAAGCATA +
Preference number: 5 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSWAVPV*EGGPSI
Trigger: TATGCTTGGCCCACCTTCCAAGACTGGCACTGCCCA...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS TCA 90 bp GGGAGGAATCTGTGGAGCTGGGAGAATAAGCTTACCACCTGGTGTTaGAGGACCACGTTTCGGAAGCAGAAGCTGTTTAATCAGACTCGA +
Preference number: 5 (lower is better)
Translates to: GRNLWSWENKLTTWC*RTTFRKQKLFNQTR
Trigger: TCGAGTCTGATTAAACAGCTTCTGCTTCCGAAACGTGGTCCTTCAACACCAGGTGGTAAGCTTATTCTCCCAGCTCCACAGATTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS TCA 90 bp AGGTTTCTTGATCCTCTCCTCAGAGCCATAAGTGCAGCACTGGGATaGTTCACAATGGCCTTTTGTGCTCTAGGAGTTGAGCTTGTGCCC +
Preference number: 5 (lower is better)
Translates to: RFLDPLLRAISAALG*FTMAFCALGVELVP
Trigger: GGGCACAAGCTCAACTCCTAGAGCACAAAAGGCCATTGTGAATCATCCCAGTGCTGCACTTATGGCTCTGAGGAGAGGATCAAGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000477947.1
ENST00000479608.5
CDS GCA 90 bp CTGTTTAATCAGACTCGACTCACCAGAGGCAGGCTGACCAACTCCTaGATTCGACTGTTGAGGTTGAACTTGCATCTGTACTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LFNQTRLTRGRLTNS*IRLLRLNLHLYLLG
Trigger: CCCCAACAAGTACAGATGCAAGTTCAACCTCAACAGTCGAATGCAGGAGTTGGTCAGCCTGCCTCTGGTGAGTCGAGTCTGATTAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS GCA 90 bp CTGAACAGCACTTTCTATTGCTACTTTAGCTACAGTGCTTGGATCTaGTCCTGCTGGCACAGCAACCATTGTTGCGCTGCAGCCAGCATT +
Preference number: 5 (lower is better)
Translates to: LNSTFYCYFSYSAWI*SCWHSNHCCAAASI
Trigger: AATGCTGGCTGCAGCGCAACAATGGTTGCTGTGCCAGCAGGAGCAGATCCAAGCACTGTAGCTAAAGTAGCAATAGAAAGTGCTGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS-3UTR CAA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTATTGGATGCAGAAGTaGTTACATACTGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQYWMQK*LHTVGV
Trigger: CACCCCCACAGTATGTAACAACTTCTGCATCCAATA...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTCTGAAACCCTACCCTaGAGGCTTGTGGACTTGGGA +
Preference number: 5 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGSETLP*RLVDLG
Trigger: TCCCAAGTCCACAAGCCTCAAGGGTAGGGTTTCAGA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTGGCTGCTGTGGTTGTaGAATAGGCTGCTGTACCAC +
Preference number: 5 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGWLLWL*NRLLYH
Trigger: GTGGTACAGCAGCCTATTCAACAACCACAGCAGCCA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTTGCATAAGTTTGACCTaGTTGAGCTGGCTGGCTTAC +
Preference number: 5 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSCISLT*LSWLAY
Trigger: GTAAGCCAGCCAGCTCAACAAGGTCAAACTTATGCA...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTTTGCATCTGTACTTGTaGGGGCTGCTGAACTTGTAC +
Preference number: 5 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSLHLYL*GLLNLY
Trigger: GTACAAGTTCAGCAGCCCCAACAAGTACAGATGCAA...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTGAGGGCTCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTAGGGTGGCATTGCACTaGGGACCAACTGAACATTTT +
Preference number: 5 (lower is better)
Translates to: FEGSEGHPRDTHMISAVSRVALH*GPTEHF
Trigger: AAAATGTTCAGTTGGTCCCAAGTGCAATGCCACCCT...AGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGAGCCCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAGCGCTGCAGCCAGCATaGTTGGGGTCACTGATTGTA +
Preference number: 5 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSALQPA*LGSLIV
Trigger: TACAATCAGTGACCCCAACAATGCTGGCTGCAGCGC...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGGCGCTGCAGCCAGCATaGTTGGGGTCACTGATTGTA +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLALQPA*LGSLIV
Trigger: TACAATCAGTGACCCCAACAATGCTGGCTGCAGCGC...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTTCCTCCATGTTCAGTaGCTGCATGGTAGAAAACCT +
Preference number: 5 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSFLHVQ*LHGRKP
Trigger: AGGTTTTCTACCATGCAGCAACTGAACATGGAGGAA...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGGGTGACCGTTATACCTaGCCTTCAGCTGAATTTAGA +
Preference number: 5 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQGDRYT*PSAEFR
Trigger: TCTAAATTCAGCTGAAGGCAAGGTATAACGGTCACC...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGTTTCAGCGGTGTCTGTaGGGCAGTGCCAGTCTTGGA +
Preference number: 5 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSFQRCL*GSASLG
Trigger: TCCAAGACTGGCACTGCCCAACAGACACCGCTGAAA...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS TCA 90 bp CTGAGAAGGGAGAGGTTTTGGTGCAATGTTCTGAAACCCTACCCTTaGGGCTTGTGGACTTGGGACACCAGCAATAGTAACCATTTGTCC +
Preference number: 5 (lower is better)
Translates to: LRRERFWCNVLKPYP*GLWTWDTSNSNHLS
Trigger: GGACAAATGGTTACTATTGCTGGTGTCCCAAGTCCACAAGCCTCAAGGGTAGGGTTTCAGAACATTGCACCAAAACCTCTCCCTTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS GCA 90 bp GGGAAGTGGTATAGCCCTCCGTTTTACTCCTACCACATGAATATGTaGCTGCCCATTGCTACTGGAATCCTCCACTCTCTTCACTGTATG +
Preference number: 5 (lower is better)
Translates to: GKWYSPPFYSYHMNM*LPIATGILHSLHCM
Trigger: CATACAGTGAAGAGAGTGGAGGATTCCAGTAGCAATGGGCAGGCACATATTCATGTGGTAGGAGTAAAACGGAGGGCTATACCACTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp GGCTATTTGAGATCAGTGGACCTGGCAATATTTGTAAGTTCGAAATaGGCACAGTTTGTACTCCCCCTGAGGGTGGCATTGCACTTGGGA +
Preference number: 5 (lower is better)
Translates to: GYLRSVDLAIFVSSK*AQFVLPLRVALHLG
Trigger: TCCCAAGTGCAATGCCACCCTCAGGGGGAGTACAAACTGTGCCCATTTCGAACTTACAAATATTGCCAGGTCCACTGATCTCAAATAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp GACTCACAGTTGCAGGTGCAAAACTCGTATTTGGCACAACTGTTATaGTTACCTGGTTGCCAGAAGTCCCTTGGAAAATGGTTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: DSQLQVQNSYLAQLL*LPGCQKSLGKWLLG
Trigger: GCCCAGCAACCATTTTCCAAGGGACTTCTGGCAACCAGGTAACCATAACAGTTGTGCCAAATACGAGTTTTGCACCTGCAACTGTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp ACAAGACTGCCACAGACACATGAAGTTCTGTCCAGGTTTTCTCATTaGATCTCCAGGCTGACTGGATCCACTGAATGGAGAAGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: TRLPQTHEVLSRFSH*ISRLTGSTEWRRLR
Trigger: TCTCAGCCTTCTCCATTCAGTGGATCCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGACAGAACTTCATGTGTCTGTGGCAGTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS CCA 90 bp CCGCTGTCGCTGAAAAGGCTCACAACCTTCCCAAAGACACTGCCCTaGATATACATCTTTTCCTCCATGTTCAGTTGCTGCATGGTAGAA +
Preference number: 5 (lower is better)
Translates to: PLSLKRLTTFPKTLP*IYIFSSMFSCCMVE
Trigger: TTCTACCATGCAGCAACTGAACATGGAGGAAAAGATGTATATCCAGGGCAGTGTCTTTGGGAAGGTTGTGAGCCTTTTCAGCGACAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS-3UTR CAA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAGGTTGGCTGCTGTGGTaGTTGAATAGGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSGWLLW*LNRLLY
Trigger: GTACAGCAGCCTATTCAACAACCACAGCAGCCAACC...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGGCTTACCACCTGGTGTaGAAGGACCACGTTTCGGAA +
Preference number: 5 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSAYHLV*KDHVSE
Trigger: TTCCGAAACGTGGTCCTTCAACACCAGGTGGTAAGC...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTCCAAAACCTGCGGCTaGGTTACTGGCCACCTGATA +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLSKTCG*VTGHLI
Trigger: TATCAGGTGGCCAGTAACCAAGCCGCAGGTTTTGGA...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCCCCTGAGGGTGGCATaGCACTTGGGACCAACTGAA +
Preference number: 5 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLPLRVA*HLGPTE
Trigger: TTCAGTTGGTCCCAAGTGCAATGCCACCCTCAGGGG...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACCCCATTGCTGGTGTTaGTGGCTCCTCGTCGGCAGG +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQPHCWC*WLLVGR
Trigger: CCTGCCGACGAGGAGCCACAAACACCAGCAATGGGG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAGTGAGACAACTACACTaGGGCGTTGCTGAGGCACAT +
Preference number: 5 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSVRQLH*GVAEAH
Trigger: ATGTGCCTCAGCAACGCCCAAGTGTAGTTGTCTCAC...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGGGGAACTGCTATGATTaGATGTCCCTGTATAACAGA +
Preference number: 5 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQGNCYD*MSLYNR
Trigger: TCTGTTATACAGGGACATCAAATCATAGCAGTTCCC...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTGGGAACTGCTATGATTaGATGTCCCTGTATAACAGA +
Preference number: 5 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSGNCYD*MSLYNR
Trigger: TCTGTTATACAGGGACATCAAATCATAGCAGTTCCC...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACCTGGCACAGCAACCATaGTTGCGCTGCAGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNLAQQP*LRCSQH
Trigger: ATGCTGGCTGCAGCGCAACAATGGTTGCTGTGCCAG...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TCTGAAGGCCATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGGATGCTGTTGCTTTaGCTGAACAGCACTTTCTAT +
Preference number: 5 (lower is better)
Translates to: SEGHPRDTHMISAVSVGQWMLLL*LNSTFY
Trigger: ATAGAAAGTGCTGTTCAGCAAAAGCAACAGCATCCA...CTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATGGCCTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGCAGGTGCTTGTAAGTTaGAGGGCTCTGAAGGCCATC +
Preference number: 5 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSQVLVS*RALKAI
Trigger: GATGGCCTTCAGAGCCCTCAAACTTACAAGCACCTG...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS TCA 90 bp CATTGCTGGTGTTTGTGGCTCCTCGTCGGCAGGACGGGTTCTCCATaGCTTCAATTTTACGTTCATGAACATGTAAACCTGTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: HCWCLWLLVGRTGSP*LQFYVHEHVNLLLP
Trigger: AGGAAGCAACAGGTTTACATGTTCATGAACGTAAAATTGAAGTCATGGAGAACCCGTCCTGCCGACGAGGAGCCACAAACACCAGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS GCA 90 bp TGGAGCAATGAGCTGAGTTGCATTTCCCTGACTCACAGTTGCAGGTaGAAAACTCGTATTTGGCACAACTGTTATGGTTACCTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: WSNELSCISLTHSCR*KTRIWHNCYGYLVA
Trigger: GGCAACCAGGTAACCATAACAGTTGTGCCAAATACGAGTTTTGCACCTGCAACTGTGAGTCAGGGAAATGCAACTCAGCTCATTGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS GCA 90 bp TCCTGCTGGAGCAATGAGCTGAGTTGCATTTCCCTGACTCACAGTTaGAGGTGCAAAACTCGTATTTGGCACAACTGTTATGGTTACCTG +
Preference number: 5 (lower is better)
Translates to: SCWSNELSCISLTHS*RCKTRIWHNCYGYL
Trigger: CAGGTAACCATAACAGTTGTGCCAAATACGAGTTTTGCACCTGCAACTGTGAGTCAGGGAAATGCAACTCAGCTCATTGCTCCAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp ACGCAGATAATCCGACACACTGTGTTGCTGGTAATTGTAGGAAGATaGAATTGCACCAATAGGAAGCTGTGGCTTTGGATTGCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: TQIIRHTVLLVIVGR*NCTNRKLWLWIAWW
Trigger: CCACCAGGCAATCCAAAGCCACAGCTTCCTATTGGTGCAATTCCATCTTCCTACAATTACCAGCAACACAGTGTGTCGGATTATCTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000422737.6
CDS CCA 90 bp TTGAAGATTGGTTGGCAACAGGAGTCCTCTGAAAATGGTTTCCTATaGTTTGTGATCCATGAGGGATTCCTGCAGGTGAAGGAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LKIGWQQESSENGFL*FVIHEGFLQVKEQE
Trigger: CTCCTGCTCCTTCACCTGCAGGAATCCCTCATGGATCACAAACCATAGGAAACCATTTTCAGAGGACTCCTGTTGCCAACCAATCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp AACAGGTTGTGGCCCTGTACTATGATTCTGAACAACAGAACTCTGTaGAGGTCCTCCTCCAACAGCAATACTAACAGGAACTCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: NRLWPCTMILNNRTL*RSSSNSNTNRNSCL
Trigger: CAGACAGGAGTTCCTGTTAGTATTGCTGTTGGAGGAGGACCTCCACAGAGTTCTGTTGTTCAGAATCATAGTACAGGGCCACAACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp AACAATTTGGTGAATGGCTGGTGCATAAGTTTGACCTTGTTGAGCTaGCTGGCTTACAATCACTACGCTTTGTTGGGTTGGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: NNLVNGWCISLTLLS*LAYNHYALLGWLLW
Trigger: CCACAGCAGCCAACCCAACAAAGCGTAGTGATTGTAAGCCAGCCAGCTCAACAAGGTCAAACTTATGCACCAGCCATTCACCAAATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGATATGTGCCTGCCCATaGCTACTGGAATCCTCCACT +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLICACP*LLESST
Trigger: AGTGGAGGATTCCAGTAGCAATGGGCAGGCACATAT...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCGAGAAGGGAGAGGTTTaGGTGCAATGTTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGEKGEV*VQCSET
Trigger: GGTTTCAGAACATTGCACCAAAACCTCTCCCTTCTC...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCCTGTTGAGGTTGAACTaGCATCTGTACTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGLLRLN*HLYLLG
Trigger: CCCCAACAAGTACAGATGCAAGTTCAACCTCAACAG...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATGCTTACCACCTGGTGTaGAAGGACCACGTTTCGGAA +
Preference number: 5 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNAYHLV*KDHVSE
Trigger: TTCCGAAACGTGGTCCTTCAACACCAGGTGGTAAGC...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTGTGCAAAACTCGTATTaGGCACAACTGTTATGGTTA +
Preference number: 5 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSVQNSY*AQLLWL
Trigger: TAACCATAACAGTTGTGCCAAATACGAGTTTTGCAC...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGTCCTTTGTATCCCCATaGCTGGTGTTTGTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQSFVSP*LVFVAP
Trigger: AGGAGCCACAAACACCAGCAATGGGGATACAAAGGA...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATGTGAGACAACTACACTaGGGCGTTGCTGAGGCACAT +
Preference number: 5 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNVRQLH*GVAEAH
Trigger: ATGTGCCTCAGCAACGCCCAAGTGTAGTTGTCTCAC...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGCTGCAGCCAGCATTGTaGGGGTCACTGATTGTAACA +
Preference number: 5 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSLQPAL*GSLIVT
Trigger: TGTTACAATCAGTGACCCCAACAATGCTGGCTGCAG...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGGCACAGCAACCATTGTaGCGCTGCAGCCAGCATTGT +
Preference number: 5 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLAQQPL*RCSQHC
Trigger: ACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTGC...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGGAAATGTGGCTGACTTaGAGTCCCCCACTGTGTAAG +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLEMWLT*SPPLCK
Trigger: CTTACACAGTGGGGGACTCAAAGTCAGCCACATTTC...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTTGGAAGGTGGGAGTCACAATCCTGACTaGAGCTTGGAAGAAAAATAT +
Preference number: 5 (lower is better)
Translates to: YPHDFSGVCWAVPVLEGGSHNPD*SLEEKY
Trigger: ATATTTTTCTTCCAAGCTCAAGTCAGGATTGTGACT...CCCACCTTCCAAGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS TCA 90 bp GGTTGGCTGCTGTGGTTGTTGAATAGGCTGCTGTACCACTGTAGATaGAACTTGCTGAGAAGGGAGAGGTTTTGGTGCAATGTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: GWLLWLLNRLLYHCR*NLLRRERFWCNVLK
Trigger: TTTCAGAACATTGCACCAAAACCTCTCCCTTCTCAGCAAGTTTCATCTACAGTGGTACAGCAGCCTATTCAACAACCACAGCAGCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS GCA 90 bp ATAATCCGACACACTGTGTTGCTGGTAATTGTAGGAAGATGGAATTaGACCAATAGGAAGCTGTGGCTTTGGATTGCCTGGTGGTACCTC +
Preference number: 5 (lower is better)
Translates to: IIRHTVLLVIVGRWN*TNRKLWLWIAWWYL
Trigger: GAGGTACCACCAGGCAATCCAAAGCCACAGCTTCCTATTGGTGCAATTCCATCTTCCTACAATTACCAGCAACACAGTGTGTCGGATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000422737.6
CDS CCA 90 bp GGAAGATGGAATTGCACCAATAGGAAGCTGTGGCTTTGGATTGCCTaGTGGTACCTCATCATCATCCTCCCCAAAATGATGAACTTTCTC +
Preference number: 5 (lower is better)
Translates to: GRWNCTNRKLWLWIA*WYLIIILPKMMNFL
Trigger: GAGAAAGTTCATCATTTTGGGGAGGATGATGATGAGGTACCACCAGGCAATCCAAAGCCACAGCTTCCTATTGGTGCAATTCCATCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000422737.6
CDS CCA 90 bp AGCTGGAAGAGCTGCTGGATTAGCAAGAACAATTTGGTGAATGGCTaGTGCATAAGTTTGACCTTGTTGAGCTGGCTGGCTTACAATCAC +
Preference number: 5 (lower is better)
Translates to: SWKSCWISKNNLVNG*CISLTLLSWLAYNH
Trigger: GTGATTGTAAGCCAGCCAGCTCAACAAGGTCAAACTTATGCACCAGCCATTCACCAAATTGTTCTTGCTAATCCAGCAGCTCTTCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp GTATTTGGCACAACTGTTATGGTTACCTGGTTGCCAGAAGTCCCTTaGAAAATGGTTGCTGGGCTATTTGAGATCAGTGGACCTGGCAAT +
Preference number: 5 (lower is better)
Translates to: VFGTTVMVTWLPEVP*KMVAGLFEISGPGN
Trigger: ATTGCCAGGTCCACTGATCTCAAATAGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAACCAGGTAACCATAACAGTTGTGCCAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp GTTGCAGGTGCAAAACTCGTATTTGGCACAACTGTTATGGTTACCTaGTTGCCAGAAGTCCCTTGGAAAATGGTTGCTGGGCTATTTGAG +
Preference number: 5 (lower is better)
Translates to: VAGAKLVFGTTVMVT*LPEVPWKMVAGLFE
Trigger: CTCAAATAGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAACCAGGTAACCATAACAGTTGTGCCAAATACGAGTTTTGCACCTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp AGTTGCATTTCCCTGACTCACAGTTGCAGGTGCAAAACTCGTATTTaGCACAACTGTTATGGTTACCTGGTTGCCAGAAGTCCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: SCISLTHSCRCKTRI*HNCYGYLVARSPLE
Trigger: TTCCAAGGGACTTCTGGCAACCAGGTAACCATAACAGTTGTGCCAAATACGAGTTTTGCACCTGCAACTGTGAGTCAGGGAAATGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS-3UTR CAA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATAGTCACTGGAGCATTTaGTTGCTGGTGGGTATGAGG +
Preference number: 5 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNSHWSI*LLVGMR
Trigger: CCTCATACCCACCAGCAACAAAATGCTCCAGTGACT...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGTCTGAAACCCTACCCTaGAGGCTTGTGGACTTGGGA +
Preference number: 5 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLSETLP*RLVDLG
Trigger: TCCCAAGTCCACAAGCCTCAAGGGTAGGGTTTCAGA...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATCTACGCTTTGTTGGGTaGGCTGCTGTGGTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNLRFVG*AAVVVE
Trigger: TTCAACAACCACAGCAGCCAACCCAACAAAGCGTAG...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACATGGCAGTAGGGACTaGGTTATTAGTAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPHGSRD*VISSWD
Trigger: GTCCCAGCTACTAATAACCAAGTCCCTACTGCCATG...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGCTGTTGAGGTTGAACTaGCATCTGTACTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLLLRLN*HLYLLG
Trigger: CCCCAACAAGTACAGATGCAAGTTCAACCTCAACAG...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTCCTGCATTCGACTGTaGAGGTTGAACTTGCATCTG +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLSCIRL*RLNLHL
Trigger: CAGATGCAAGTTCAACCTCAACAGTCGAATGCAGGA...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATCTGCTGAGCTGGAGTTaGCCCCTGCACTCCAAAACC +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNLLSWS*PLHSKT
Trigger: GGTTTTGGAGTGCAGGGGCAAACTCCAGCTCAGCAG...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp GCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCTCCCTTGGAAAATGGTaGCTGGGCTATTTGAGATCA +
Preference number: 5 (lower is better)
Translates to: AEMVVGRPSTFLDANRTGSLGKW*LGYLRS
Trigger: TGATCTCAAATAGCCCAGCAACCATTTTCCAAGGGA...GCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAGTTATGGTTACCTGGTaGCCAGAAGTCCCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSVMVTW*PEVPWK
Trigger: TTTCCAAGGGACTTCTGGCAACCAGGTAACCATAAC...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGAGTGGCTGGAAGCGTTaGTACTGGAAGTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLSGWKR*YWKSNS
Trigger: GGAGTTGGACTTCCAGTACAAACGCTTCCAGCCACT...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp CATCCTAGGGATACCCACATGATTTCAGCGGTGTCTGTTGGGCAGTGCCAGTCTATTATTTTATCACCTTaGAATGGGGGAGTAGCAGTA +
Preference number: 5 (lower is better)
Translates to: HPRDTHMISAVSVGQCQSIILSP*NGGVAV
Trigger: TACTGCTACTCCCCCATTCAAAGGTGATAAAATAAT...AGACTGGCACTGCCCAACAGACACCGCTGAAATCATGTGGGTATCCCTAGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATTCCTTTGTATCCCCATaGCTGGTGTTTGTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNSFVSP*LVFVAP
Trigger: AGGAGCCACAAACACCAGCAATGGGGATACAAAGGA...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGGAGAATGGGATACTTTaGATCCTGAGTCGGGAACTG +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLENGIL*ILSREL
Trigger: CAGTTCCCGACTCAGGATCAAAAGTATCCCATTCTC...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGCAGCCAGCATTGTaGGGGTCACTGATTGTAACA +
Preference number: 5 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPLQPAL*GSLIVT
Trigger: TGTTACAATCAGTGACCCCAACAATGCTGGCTGCAG...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACGTCCAGGTTTTCTCATaGGATCTCCAGGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNVQVFS*DLQADW
Trigger: CCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGAC...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGCAAGTAGGGCATCCTTaGAACAGTGCTTATCCTGCA +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLQVGHP*NSAYPA
Trigger: TGCAGGATAAGCACTGTTCAAAGGATGCCCTACTTG...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGGAAAGACAAGGTTTCTaGATCCTCTCCTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSERQGF*ILSSEP
Trigger: TGGCTCTGAGGAGAGGATCAAGAAACCTTGTCTTTC...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATCTGCAGATAAGCTGGTaGACAATCCCACAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNLQISW*TIPQQF
Trigger: GAACTGCTGTGGGATTGTCAACCAGCTTATCTGCAG...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGTCCAAGCTCTGAGCTaGTACACGACAAACGTTTAC +
Preference number: 5 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQVQALS*YTTNVY
Trigger: GTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGAC...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGGTCCAAGCTCTGAGCTaGTACACGACAAACGTTTAC +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLVQALS*YTTNVY
Trigger: GTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGAC...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACCAGGTGCTTGTAAGTTaGAGGGCTCTGAAGGCCATC +
Preference number: 5 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNQVLVS*RALKAI
Trigger: GATGGCCTTCAGAGCCCTCAAACTTACAAGCACCTG...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS TCA 90 bp ACAGAGGTTGTAGAATGTGGTGAGACAACTACACTTGGGCGTTGCTaGGGCACATCTGAATTCAAACTTGAAGCTAGAGGTCCATTAAGC +
Preference number: 5 (lower is better)
Translates to: TEVVECGETTTLGRC*GTSEFKLEARGPLS
Trigger: GCTTAATGGACCTCTAGCTTCAAGTTTGAATTCAGATGTGCCTCAGCAACGCCCAAGTGTAGTTGTCTCACCACATTCTACAACCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS GCA 90 bp TGGAAGAGCTGCTGGATTAGCAAGAACAATTTGGTGAATGGCTGGTaGATAAGTTTGACCTTGTTGAGCTGGCTGGCTTACAATCACTAC +
Preference number: 5 (lower is better)
Translates to: WKSCWISKNNLVNGW*ISLTLLSWLAYNHY
Trigger: GTAGTGATTGTAAGCCAGCCAGCTCAACAAGGTCAAACTTATGCACCAGCCATTCACCAAATTGTTCTTGCTAATCCAGCAGCTCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS GCA 90 bp CAGGTGCAAAACTCGTATTTGGCACAACTGTTATGGTTACCTGGTTaGCAGAAGTCCCTTGGAAAATGGTTGCTGGGCTATTTGAGATCA +
Preference number: 5 (lower is better)
Translates to: QVQNSYLAQLLWLPG*QKSLGKWLLGYLRS
Trigger: TGATCTCAAATAGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAACCAGGTAACCATAACAGTTGTGCCAAATACGAGTTTTGCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp GTAATTGTAGGAAGATGGAATTGCACCAATAGGAAGCTGTGGCTTTaGATTGCCTGGTGGTACCTCATCATCATCCTCCCCAAAATGATG +
Preference number: 5 (lower is better)
Translates to: VIVGRWNCTNRKLWL*IAWWYLIIILPKMM
Trigger: CATCATTTTGGGGAGGATGATGATGAGGTACCACCAGGCAATCCAAAGCCACAGCTTCCTATTGGTGCAATTCCATCTTCCTACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000422737.6
CDS CCA 90 bp TCCGTTTTACTCCTACCACATGAATATGTGCCTGCCCATTGCTACTaGAATCCTCCACTCTCTTCACTGTATGATTTGGAAAGACCGTTC +
Preference number: 5 (lower is better)
Translates to: SVLLLPHEYVPAHCY*NPPLSSLYDLERPF
Trigger: GAACGGTCTTTCCAAATCATACAGTGAAGAGAGTGGAGGATTCCAGTAGCAATGGGCAGGCACATATTCATGTGGTAGGAGTAAAACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp TGTGGAGGTCCTCCTCCAACAGCAATACTAACAGGAACTCCTGTCTaGGGTATGGAATTCTGGATAACTGTAGCCTTAACAACTTCACAA +
Preference number: 5 (lower is better)
Translates to: CGGPPPTAILTGTPV*GMEFWITVALTTSQ
Trigger: TTGTGAAGTTGTTAAGGCTACAGTTATCCAGAATTCCATACCCCAGACAGGAGTTCCTGTTAGTATTGCTGTTGGAGGAGGACCTCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp TGGATGGTGAAGCAATGTCTGAGAATTCACAACTGTAACAGGTTGTaGCCCTGTACTATGATTCTGAACAACAGAACTCTGTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: WMVKQCLRIHNCNRL*PCTMILNNRTLWRS
Trigger: GGACCTCCACAGAGTTCTGTTGTTCAGAATCATAGTACAGGGCCACAACCTGTTACAGTTGTGAATTCTCAGACATTGCTTCACCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp GCACAACTGTTATGGTTACCTGGTTGCCAGAAGTCCCTTGGAAAATaGTTGCTGGGCTATTTGAGATCAGTGGACCTGGCAATATTTGTA +
Preference number: 5 (lower is better)
Translates to: AQLLWLPGCQKSLGK*LLGYLRSVDLAIFV
Trigger: TACAAATATTGCCAGGTCCACTGATCTCAAATAGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAACCAGGTAACCATAACAGTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS-3UTR CAA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGTACATGAGTCTGGGTTaGGACTTGCTCTATAGCTTG +
Preference number: 5 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQYMSLG*DLLYSL
Trigger: CAAGCTATAGAGCAAGTCCAAACCCAGACTCATGTA...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGTGTTGCAGTCAGATTaGAAGATTGGTTGGCAACAG +
Preference number: 5 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQVLQSD*KIGWQQ
Trigger: CTGTTGCCAACCAATCTTCAAATCTGACTGCAACAC...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAAGTCACTGGAGCATTTaGTTGCTGGTGGGTATGAGG +
Preference number: 5 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLSHWSI*LLVGMR
Trigger: CCTCATACCCACCAGCAACAAAATGCTCCAGTGACT...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCACTGTGGGACAGCTTGTaGAATTACTGTAACAGGAGT +
Preference number: 5 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSLWDSL*NYCNRS
Trigger: ACTCCTGTTACAGTAATTCAACAAGCTGTCCCACAG...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGACTCTGTGGGACAGCTaGTTGAATTACTGTAACAGG +
Preference number: 5 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSTLWDS*LNYCNR
Trigger: CCTGTTACAGTAATTCAACAAGCTGTCCCACAGAGT...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGGCTGGTGCATAAGTTaGACCTTGTTGAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRGWCIS*TLLSWL
Trigger: CAGCCAGCTCAACAAGGTCAAACTTATGCACCAGCC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCAAGGGTGGCATTGCACTaGGGACCAACTGAACATTTT +
Preference number: 5 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPRVALH*GPTEHF
Trigger: AAAATGTTCAGTTGGTCCCAAGTGCAATGCCACCCT...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATCCAGCAGGAGATGCTaGAGTGGCTGGAAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQSSRRC*SGWKRL
Trigger: CAAACGCTTCCAGCCACTCAAGCATCTCCTGCTGGA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAGGCCTCTTTACAGTTTaGCATTCTGCTGTGCCATTT +
Preference number: 5 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSGLFTV*HSAVPF
Trigger: AAATGGCACAGCAGAATGCAAAACTGTAAAGAGGCC...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTACTGCAGCCAGCATTGTaGGGGTCACTGATTGTAACA +
Preference number: 5 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLLQPAL*GSLIVT
Trigger: TGTTACAATCAGTGACCCCAACAATGCTGGCTGCAG...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGCGCTGCAGCCAGCATaGTTGGGGTCACTGATTGTA +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNALQPA*LGSLIV
Trigger: TACAATCAGTGACCCCAACAATGCTGGCTGCAGCGC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTGCACAGCAACCATTGTaGCGCTGCAGCCAGCATTGT +
Preference number: 5 (lower is better)
Translates to: YSRKARTTACNSMRWKNGAQQPL*RCSQHC
Trigger: ACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTGC...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGCACAGCAACCATTGTaGCGCTGCAGCCAGCATTGT +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNAQQPL*RCSQHC
Trigger: ACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTGC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp AAAAATTCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACGTCCAGGTTTTCTCATaGGATCTCCAGGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: KNSVQALSLYTTNVYSGYVQVFS*DLQADW
Trigger: CCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGAC...GTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCACTTCTGACTTCCTGCTaGTCCTGGTTCATCTTGTTT +
Preference number: 5 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSLLTSC*SWFILF
Trigger: AAACAAGATGAACCAGGACAAGCAGGAAGTCAGAAG...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS TCA 90 bp GCTATGATAACAGTATCTTGTGACTGGCTACCAGCTGATGTCTGTTaGGATGAAGTTTGCACAGGTTGGGGTGATGTGGTGATTAACTGT +
Preference number: 5 (lower is better)
Translates to: AMITVSCDWLPADVC*DEVCTGWGDVVINC
Trigger: ACAGTTAATCACCACATCACCCCAACCTGTGCAAACTTCATCTCAACAGACATCAGCTGGTAGCCAGTCACAAGATACTGTTATCATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS TCA 90 bp TGGTCCCTCTTTTTCATCTGTAAAATCTCGAAAGACAAGGTTTCTTaGTCCTCTCCTCAGAGCCATAAGTGCAGCACTGGGATGATTCAC +
Preference number: 5 (lower is better)
Translates to: WSLFFICKISKDKVS*SSPQSHKCSTGMIH
Trigger: GTGAATCATCCCAGTGCTGCACTTATGGCTCTGAGGAGAGGATCAAGAAACCTTGTCTTTCGAGATTTTACAGATGAAAAAGAGGGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS TCA 90 bp GTTTCAAGGCATGCTTACTGTAAAATCTCGAAAGACAAGGTTTCTTaGTCCTCTCCTCAGAGCCATAAGTGCAGCACTGGGATGATTCAC +
Preference number: 5 (lower is better)
Translates to: VSRHAYCKISKDKVS*SSPQSHKCSTGMIH
Trigger: GTGAATCATCCCAGTGCTGCACTTATGGCTCTGAGGAGAGGATCAAGAAACCTTGTCTTTCGAGATTTTACAGTAAGCATGCCTTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477947.1
CDS CCA 90 bp TTTATTTGGAATTCCTGCGACTGTTTCCCTATCAGTATCCTCTGCTaGCCTCTTTACAGTTTTGCATTCTGCTGTGCCATTTGTAGACCG +
Preference number: 5 (lower is better)
Translates to: FIWNSCDCFPISILC*PLYSFAFCCAICRP
Trigger: CGGTCTACAAATGGCACAGCAGAATGCAAAACTGTAAAGAGGCCAGCAGAGGATACTGATAGGGAAACAGTCGCAGGAATTCCAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS-3UTR CAA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGGACAGCCCATAACTTaGACGCAGATAATCCGACAC +
Preference number: 5 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRGQPIT*TQIIRH
Trigger: GTGTCGGATTATCTGCGTCAAAGTTATGGGCTGTCC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR CAA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCATACATGAGTCTGGGTTaGGACTTGCTCTATAGCTTG +
Preference number: 5 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPYMSLG*DLLYSL
Trigger: CAAGCTATAGAGCAAGTCCAAACCCAGACTCATGTA...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGATATGTGCCTGCCCATaGCTACTGGAATCCTCCACT +
Preference number: 5 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRICACP*LLESST
Trigger: AGTGGAGGATTCCAGTAGCAATGGGCAGGCACATAT...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGAATTGGAGCTTTACTTaGAATGACAGTCACTGGAGC +
Preference number: 5 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQNWSFT*NDSHWS
Trigger: GCTCCAGTGACTGTCATTCAAAGTAAAGCTCCAATT...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCATATTGGATGCAGAAGTaGTTACATACTGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPYWMQK*LHTVGV
Trigger: CACCCCCACAGTATGTAACAACTTCTGCATCCAATA...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATCTGAAACCCTACCCTaGAGGCTTGTGGACTTGGGA +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQSETLP*RLVDLG
Trigger: TCCCAAGTCCACAAGCCTCAAGGGTAGGGTTTCAGA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTGGCTGCTGTGGTTGTaGAATAGGCTGCTGTACCAC +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNWLLWL*NRLLYH
Trigger: GTGGTACAGCAGCCTATTCAACAACCACAGCAGCCA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGGTTGGCTGCTGTGGTaGTTGAATAGGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQGWLLW*LNRLLY
Trigger: GTACAGCAGCCTATTCAACAACCACAGCAGCCAACC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGGCTGGTGCATAAGTTaGACCTTGTTGAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNGWCIS*TLLSWL
Trigger: CAGCCAGCTCAACAAGGTCAAACTTATGCACCAGCC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGCTTACCACCTGGTGTaGAAGGACCACGTTTCGGAA +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNAYHLV*KDHVSE
Trigger: TTCCGAAACGTGGTCCTTCAACACCAGGTGGTAAGC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATCCAAAACCTGCGGCTaGGTTACTGGCCACCTGATA +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQSKTCG*VTGHLI
Trigger: TATCAGGTGGCCAGTAACCAAGCCGCAGGTTTTGGA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCCCCTGAGGGTGGCATaGCACTTGGGACCAACTGAA +
Preference number: 5 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINPLRVA*HLGPTE
Trigger: TTCAGTTGGTCCCAAGTGCAATGCCACCCTCAGGGG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGTTGCCAGAAGTCCCTaGGAAAATGGTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQVARSP*ENGCWA
Trigger: AGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAAC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGAGTGGCTGGAAGCGTTaGTACTGGAAGTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKSGWKR*YWKSNS
Trigger: GGAGTTGGACTTCCAGTACAAACGCTTCCAGCCACT...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATTCCAGCAGGAGATGCTaGAGTGGCTGGAAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDSSRRC*SGWKRL
Trigger: CAAACGCTTCCAGCCACTCAAGCATCTCCTGCTGGA...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATGAACATGTAAACCTGTaGCTTCCTTTGCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNEHVNL*LPLLPP
Trigger: AGGAGGAAGCAAAGGAAGCAACAGGTTTACATGTTC...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp CTAGGACACCACAGAATGTATTTCCAGTGGCTGCAGTGGCATGAAAGGTATTCAGCATTTCATTTTCCTTaGTATCCCCATTGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: LGHHRMYFQWLQWHERYSAFHFP*YPHCWC
Trigger: ACACCAGCAATGGGGATACAAAGGAAAATGAAATGC...TGAATACCTTTCATGCCACTGCAGCCACTGGAAATACATTCTGTGGTGTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATTCCCTTGTGGTTCCATaGGAGATATCTCACCATTTC +
Preference number: 5 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNSLVVP*EISHHF
Trigger: GAAATGGTGAGATATCTCCAATGGAACCACAAGGGA...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGTGAGACAACTACACTaGGGCGTTGCTGAGGCACAT +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQVRQLH*GVAEAH
Trigger: ATGTGCCTCAGCAACGCCCAAGTGTAGTTGTCTCAC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGGGGAACTGCTATGATTaGATGTCCCTGTATAACAGA +
Preference number: 5 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSGNCYD*MSLYNR
Trigger: TCTGTTATACAGGGACATCAAATCATAGCAGTTCCC...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATGGCCTCTTTACAGTTTaGCATTCTGCTGTGCCATTT +
Preference number: 5 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNGLFTV*HSAVPF
Trigger: AAATGGCACAGCAGAATGCAAAACTGTAAAGAGGCC...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACCTGGCACAGCAACCATaGTTGCGCTGCAGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINLAQQP*LRCSQH
Trigger: ATGCTGGCTGCAGCGCAACAATGGTTGCTGTGCCAG...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp CAGCAGAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGTGGATGCTGTTGCTTTaGCTGAACAGCACTTTCTAT +
Preference number: 5 (lower is better)
Translates to: QQKWWLGGLPHFWMLIEQWMLLL*LNSTFY
Trigger: ATAGAAAGTGCTGTTCAGCAAAAGCAACAGCATCCA...CTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGTCCAGGTTTTCTCATaGGATCTCCAGGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNVQVFS*DLQADW
Trigger: CCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGAC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTTCTGACTTCCTGCTaGTCCTGGTTCATCTTGTTT +
Preference number: 5 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPLLTSC*SWFILF
Trigger: AAACAAGATGAACCAGGACAAGCAGGAAGTCAGAAG...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGGCAGTGCCAGTCTaGGAAGGTGGGCCAAGCATA +
Preference number: 5 (lower is better)
Translates to: KTKLLISKQNTRSIARYWWAVPV*EGGPSI
Trigger: TATGCTTGGCCCACCTTCCAAGACTGGCACTGCCCA...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS TCA 90 bp GGAGAATGGGATACTTTTGATCCTGAGTCGGGAACTGCTATGATTTaGTGTCCCTGTATAACAGAGGTTGTAGAATGTGGTGAGACAACT +
Preference number: 5 (lower is better)
Translates to: GEWDTFDPESGTAMI*CPCITEVVECGETT
Trigger: AGTTGTCTCACCACATTCTACAACCTCTGTTATACAGGGACATCAAATCATAGCAGTTCCCGACTCAGGATCAAAAGTATCCCATTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS TCA 90 bp GGGACCACATTCTGTACATATGTTGGTGGATGCTGTTGCTTTTGCTaGACAGCACTTTCTATTGCTACTTTAGCTACAGTGCTTGGATCT +
Preference number: 5 (lower is better)
Translates to: GTTFCTYVGGCCCFC*TALSIATLATVLGS
Trigger: AGATCCAAGCACTGTAGCTAAAGTAGCAATAGAAAGTGCTGTTCAGCAAAAGCAACAGCATCCACCAACATATGTACAGAATGTGGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS CCA 90 bp TACACTCGTAACCACACTGAAAAAGAATATGTGAAAACACTAACCTaGGGCAGATGCTACATGAGTCTGGGTTTGGACTTGCTCTATAGC +
Preference number: 5 (lower is better)
Translates to: YTRNHTEKEYVKTLT*GRCYMSLGLDLLYS
Trigger: GCTATAGAGCAAGTCCAAACCCAGACTCATGTAGCATCTGCCCCAGGTTAGTGTTTTCACATATTCTTTTTCAGTGTGGTTACGAGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480128.1
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGGACAGCCCATAACTTaGACGCAGATAATCCGACAC +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNGQPIT*TQIIRH
Trigger: GTGTCGGATTATCTGCGTCAAAGTTATGGGCTGTCC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGCCAAGAGCTTAACATaGCCCTCCTCAAAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRAKSLT*PSSKER
Trigger: TCTTTCCTTTGAGGAGGGCAATGTTAAGCTCTTGGC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATATATGTGCCTGCCCATaGCTACTGGAATCCTCCACT +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNICACP*LLESST
Trigger: AGTGGAGGATTCCAGTAGCAATGGGCAGGCACATAT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGCACAGTATGAACACCTaGTACAGGAAAAGACATTTG +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLHSMNT*YRKRHL
Trigger: CAAATGTCTTTTCCTGTACAAGGTGTTCATACTGTG...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGGATTTTGTGGAATTCTaGAAACAGTTTGTGCCACAG +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLDFVEF*KQFVPQ
Trigger: CTGTGGCACAAACTGTTTCAAGAATTCCACAAAATC...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TCTAAACAAAACACACGATCCATAGCTAGATATTGGTGGCCCCCTCTGAGATCGGATTTTGTGGAATTCTaGAAACAGTTTGTGCCACAG +
Preference number: 5 (lower is better)
Translates to: SKQNTRSIARYWWPPLRSDFVEF*KQFVPQ
Trigger: CTGTGGCACAAACTGTTTCAAGAATTCCACAAAATC...CGATCTCAGAGGGGGCCACCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAGTCACTGGAGCATTTaGTTGCTGGTGGGTATGAGG +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQSHWSI*LLVGMR
Trigger: CCTCATACCCACCAGCAACAAAATGCTCCAGTGACT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTACACAACTGTAACAGGTaGTGGCCCTGTACTATGATT +
Preference number: 5 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLHNCNR*WPCTMI
Trigger: AATCATAGTACAGGGCCACAACCTGTTACAGTTGTG...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATTGGCTGCTGTGGTTGTaGAATAGGCTGCTGTACCAC +
Preference number: 5 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDWLLWL*NRLLYH
Trigger: GTGGTACAGCAGCCTATTCAACAACCACAGCAGCCA...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATGGTTGGCTGCTGTGGTaGTTGAATAGGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDGWLLW*LNRLLY
Trigger: GTACAGCAGCCTATTCAACAACCACAGCAGCCAACC...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACTACGCTTTGTTGGGTaGGCTGCTGTGGTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLRFVG*AAVVVE
Trigger: TTCAACAACCACAGCAGCCAACCCAACAAAGCGTAG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATAATCACTACGCTTTGTaGGGTTGGCTGCTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNNHYAL*GWLLWL
Trigger: CAACCACAGCAGCCAACCCAACAAAGCGTAGTGATT...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTAATCACTACGCTTTGTaGGGTTGGCTGCTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSNHYAL*GWLLWL
Trigger: CAACCACAGCAGCCAACCCAACAAAGCGTAGTGATT...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTACAATCACTACGCTTaGTTGGGTTGGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNYNHYA*LGWLLW
Trigger: CCACAGCAGCCAACCCAACAAAGCGTAGTGATTGTA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTTACAATCACTACGCTTaGTTGGGTTGGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSYNHYA*LGWLLW
Trigger: CCACAGCAGCCAACCCAACAAAGCGTAGTGATTGTA...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACATGGCAGTAGGGACTaGGTTATTAGTAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQHGSRD*VISSWD
Trigger: GTCCCAGCTACTAATAACCAAGTCCCTACTGCCATG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGTTCCCTGACTCACAGTaGCAGGTGCAAAACTCGTAT +
Preference number: 5 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRFPDSQ*QVQNSY
Trigger: ATACGAGTTTTGCACCTGCAACTGTGAGTCAGGGAA...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTCCTTTGTATCCCCATaGCTGGTGTTTGTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNSFVSP*LVFVAP
Trigger: AGGAGCCACAAACACCAGCAATGGGGATACAAAGGA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTATTGAAGGAGGTAGACTaGAGTCACTGTACTTTCTCC +
Preference number: 5 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLLKEVD*SHCTFS
Trigger: GGAGAAAGTACAGTGACTCAAGTCTACCTCCTTCAA...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGAGAATGGGATACTTTaGATCCTGAGTCGGGAACTG +
Preference number: 5 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRENGIL*ILSREL
Trigger: CAGTTCCCGACTCAGGATCAAAAGTATCCCATTCTC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATCTGCAGCCAGCATTGTaGGGGTCACTGATTGTAACA +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNLQPAL*GSLIVT
Trigger: TGTTACAATCAGTGACCCCAACAATGCTGGCTGCAG...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGGCACAGCAACCATTGTaGCGCTGCAGCCAGCATTGT +
Preference number: 5 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVAQQPL*RCSQHC
Trigger: ACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTGC...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACTTCCTCCATGTTCAGTaGCTGCATGGTAGAAAACCT +
Preference number: 5 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNFLHVQ*LHGRKP
Trigger: AGGTTTTCTACCATGCAGCAACTGAACATGGAGGAA...GTTCTGCAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTATTCCTCCATGTTCAGTaGCTGCATGGTAGAAAACCT +
Preference number: 5 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLFLHVQ*LHGRKP
Trigger: AGGTTTTCTACCATGCAGCAACTGAACATGGAGGAA...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGTTTCAGCGGTGTCTGTaGGGCAGTGCCAGTCTTGGA +
Preference number: 5 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVFQRCL*GSASLG
Trigger: TCCAAGACTGGCACTGCCCAACAGACACCGCTGAAA...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS TCA 90 bp GGACTTGGGACACCAGCAATAGTAACCATTTGTCCTGTAGCTACCTaGAAATTCTGTACTGAAGTTGCTGAGACAATATTGGATGCAGAA +
Preference number: 5 (lower is better)
Translates to: GLGTPAIVTICPVAT*KFCTEVAETILDAE
Trigger: TTCTGCATCCAATATTGTCTCAGCAACTTCAGTACAGAATTTTCAGGTAGCTACAGGACAAATGGTTACTATTGCTGGTGTCCCAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS GCA 90 bp TACTTTATTTGGAATTCCTGCGACTGTTTCCCTATCAGTATCCTCTaGTGGCCTCTTTACAGTTTTGCATTCTGCTGTGCCATTTGTAGA +
Preference number: 5 (lower is better)
Translates to: YFIWNSCDCFPISIL*WPLYSFAFCCAICR
Trigger: TCTACAAATGGCACAGCAGAATGCAAAACTGTAAAGAGGCCAGCAGAGGATACTGATAGGGAAACAGTCGCAGGAATTCCAAATAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS CCA 90 bp CCAACAGCAATACTAACAGGAACTCCTGTCTGGGGTATGGAATTCTaGATAACTGTAGCCTTAACAACTTCACAAGGAATTGGAGCTTTA +
Preference number: 5 (lower is better)
Translates to: PTAILTGTPVWGMEF*ITVALTTSQGIGAL
Trigger: TAAAGCTCCAATTCCTTGTGAAGTTGTTAAGGCTACAGTTATCCAGAATTCCATACCCCAGACAGGAGTTCCTGTTAGTATTGCTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS CCA 90 bp ATTGTTGGGGTCACTGATTGTAACAATTCTAACTCCTACTTTATTTaGAATTCCTGCGACTGTTTCCCTATCAGTATCCTCTGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: IVGVTDCNNSNSYFI*NSCDCFPISILCWP
Trigger: AGGCCAGCAGAGGATACTGATAGGGAAACAGTCGCAGGAATTCCAAATAAAGTAGGAGTTAGAATTGTTACAATCAGTGACCCCAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000457135.1
ENST00000479608.5
CDS-3UTR CAA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATCTACTTTTGCAATTTTaGTGCAAGCAACATCTCCCA +
Preference number: 5 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNLLLQF*CKQHLP
Trigger: TGGGAGATGTTGCTTGCACAAAAATTGCAAAAGTAG...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGAATTGGAGCTTTACTTaGAATGACAGTCACTGGAGC +
Preference number: 5 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLNWSFT*NDSHWS
Trigger: GCTCCAGTGACTGTCATTCAAAGTAAAGCTCCAATT...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCAGTTGCTGAGACAATATaGGATGCAGAAGTTGTTACA +
Preference number: 5 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPVAETI*DAEVVT
Trigger: TGTAACAACTTCTGCATCCAATATTGTCTCAGCAAC...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTGGTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCAAGCAATAGTAACCATTaGTCCTGTAGCTACCTGAAA +
Preference number: 5 (lower is better)
Translates to: LVLSSVTVCEMWLTLSPPSNSNH*SCSYLK
Trigger: TTTCAGGTAGCTACAGGACAAATGGTTACTATTGCT...TGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGGAGAAGGGAGAGGTTTaGGTGCAATGTTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKEKGEV*VQCSET
Trigger: GGTTTCAGAACATTGCACCAAAACCTCTCCCTTCTC...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATAATCACTACGCTTTGTaGGGTTGGCTGCTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDNHYAL*GWLLWL
Trigger: CAACCACAGCAGCCAACCCAACAAAGCGTAGTGATT...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATTACAATCACTACGCTTaGTTGGGTTGGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDYNHYA*LGWLLW
Trigger: CCACAGCAGCCAACCCAACAAAGCGTAGTGATTGTA...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTGCATAAGTTTGACCTaGTTGAGCTGGCTGGCTTAC +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNCISLT*LSWLAY
Trigger: GTAAGCCAGCCAGCTCAACAAGGTCAAACTTATGCA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTGCATAAGTTTGACCTaGTTGAGCTGGCTGGCTTAC +
Preference number: 5 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKCISLT*LSWLAY
Trigger: GTAAGCCAGCCAGCTCAACAAGGTCAAACTTATGCA...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGGGCTGGTGCATAAGTTaGACCTTGTTGAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: KTKLLISKQNTRSIARYWGWCIS*TLLSWL
Trigger: CAGCCAGCTCAACAAGGTCAAACTTATGCACCAGCC...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATCATGGCAGTAGGGACTaGGTTATTAGTAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDHGSRD*VISSWD
Trigger: GTCCCAGCTACTAATAACCAAGTCCCTACTGCCATG...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTGCATCTGTACTTGTaGGGGCTGCTGAACTTGTAC +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLHLYL*GLLNLY
Trigger: GTACAAGTTCAGCAGCCCCAACAAGTACAGATGCAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATCCTGCATTCGACTGTaGAGGTTGAACTTGCATCTG +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQSCIRL*RLNLHL
Trigger: CAGATGCAAGTTCAACCTCAACAGTCGAATGCAGGA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGTCCAAAACCTGCGGCTaGGTTACTGGCCACCTGATA +
Preference number: 5 (lower is better)
Translates to: KTKLLISKQNTRSIARYWSKTCG*VTGHLI
Trigger: TATCAGGTGGCCAGTAACCAAGCCGCAGGTTTTGGA...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAGGGTGGCATTGCACTaGGGACCAACTGAACATTTT +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQRVALH*GPTEHF
Trigger: AAAATGTTCAGTTGGTCCCAAGTGCAATGCCACCCT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGGTTGCCAGAAGTCCCTaGGAAAATGGTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVVARSP*ENGCWA
Trigger: AGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAAC...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGGTTATGGTTACCTGGTaGCCAGAAGTCCCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKVMVTW*PEVPWK
Trigger: TTTCCAAGGGACTTCTGGCAACCAGGTAACCATAAC...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAGTTATGGTTACCTGGTaGCCAGAAGTCCCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQVMVTW*PEVPWK
Trigger: TTTCCAAGGGACTTCTGGCAACCAGGTAACCATAAC...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTTCCCTGACTCACAGTaGCAGGTGCAAAACTCGTAT +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNFPDSQ*QVQNSY
Trigger: ATACGAGTTTTGCACCTGCAACTGTGAGTCAGGGAA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TTCTATTTATTTTTGACTTTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACAGTGGCTGGAAGCGTTaGTACTGGAAGTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: FYLFLTFKSSSWPDLGINSGWKR*YWKSNS
Trigger: GGAGTTGGACTTCCAGTACAAACGCTTCCAGCCACT...GTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAAAGTCAAAAATAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAGAATTTTCCCTGAGTTaGAAGGAGGTAGACTTGAGT +
Preference number: 5 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLEFSLS*KEVDLS
Trigger: ACTCAAGTCTACCTCCTTCAAACTCAGGGAAAATTC...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGAGAATGGGATACTTTaGATCCTGAGTCGGGAACTG +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNENGIL*ILSREL
Trigger: CAGTTCCCGACTCAGGATCAAAAGTATCCCATTCTC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTCAAGTAGGGCATCCTTaGAACAGTGCTTATCCTGCA +
Preference number: 5 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSQVGHP*NSAYPA
Trigger: TGCAGGATAAGCACTGTTCAAAGGATGCCCTACTTG...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TATAGCAGAAAAGCTAGAACTACAGCATGCAATTCAATGAGGTGGAAGAATGGTGAAAGACAAGGTTTCTaGATCCTCTCCTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: YSRKARTTACNSMRWKNGERQGF*ILSSEP
Trigger: TGGCTCTGAGGAGAGGATCAAGAAACCTTGTCTTTC...ACCATTCTTCCACCTCATTGAATTGCATGCTGTAGTTCTAGCTTTTCTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATGAAAGACAAGGTTTCTaGATCCTCTCCTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNERQGF*ILSSEP
Trigger: TGGCTCTGAGGAGAGGATCAAGAAACCTTGTCTTTC...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422737.6
ENST00000477947.1
CDS-3UTR CAA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATCTGCAGATAAGCTGGTaGACAATCCCACAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDLQISW*TIPQQF
Trigger: GAACTGCTGTGGGATTGTCAACCAGCTTATCTGCAG...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp TCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGTGTCCAAGCTCTGAGCTaGTACACGACAAACGTTTAC +
Preference number: 5 (lower is better)
Translates to: SQFHKTVLTLQHQYLCRSVQALS*YTTNVY
Trigger: GTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGAC...ACTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp GAAAAACCTAAGTGGGAAGCCATGATCAGTTTCATTAGGTCAAACGCATTTAGGGGTGACCGTTATACCTaGCCTTCAGCTGAATTTAGA +
Preference number: 5 (lower is better)
Translates to: EKPKWEAMISFIRSNAFRGDRYT*PSAEFR
Trigger: TCTAAATTCAGCTGAAGGCAAGGTATAACGGTCACC...CCTAAATGCGTTTGACCTAATGAAACTGATCATGGCTTCCCACTTAGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGATGAATGAGAGGGTTTaGCAGAACTTATTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLMNERV*QNLLCK
Trigger: TTTGCACAATAAGTTCTGCAAAACCCTCTCATTCAT...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp GTGCTTTCTTCAGTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGAGTCACAATCCTGACTaGAGCTTGGAAGAAAAATAT +
Preference number: 5 (lower is better)
Translates to: VLSSVTVCEMWLTLSPPLSHNPD*SLEEKY
Trigger: ATATTTTTCTTCCAAGCTCAAGTCAGGATTGTGACT...CAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTACTGAAGAAAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS TCA 90 bp TTTCTACTTTTGCAATTTTTGTGCAAGCAACATCTCCCATTTCCGTaGGCATGTATAGCACCTCGAGTGTTGAGATTACAAGCAGCACAT +
Preference number: 5 (lower is better)
Translates to: FLLLQFLCKQHLPFP*ACIAPRVLRLQAAH
Trigger: ATGTGCTGCTTGTAATCTCAACACTCGAGGTGCTATACATGCTCACGGAAATGGGAGATGTTGCTTGCACAAAAATTGCAAAAGTAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
ENST00000480128.1
CDS TCA 90 bp TGTTCAATGAGTTTTACCGCAGCTAGTGCATCAGGGCCAAACATCTaGATATCCATAGAAACCAGACACACTAACATGTCTATGCTCTTT +
Preference number: 5 (lower is better)
Translates to: CSMSFTAASASGPNI*ISIETRHTNMSMLF
Trigger: AAAGAGCATAGACATGTTAGTGTGTCTGGTTTCTATGGATATTCAGATGTTTGGCCCTGATGCACTAGCTGCGGTAAAACTCATTGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000479608.5
ENST00000480128.1
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTACATGAGTCTGGGTTaGGACTTGCTCTATAGCTTG +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNYMSLG*DLLYSL
Trigger: CAAGCTATAGAGCAAGTCCAAACCCAGACTCATGTA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTACACAGTATGAACACCTaGTACAGGAAAAGACATTTG +
Preference number: 5 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLHSMNT*YRKRHL
Trigger: CAAATGTCTTTTCCTGTACAAGGTGTTCATACTGTG...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAACTGTGGGACAGCTTGTaGAATTACTGTAACAGGAGT +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLWDSL*NYCNRS
Trigger: ACTCCTGTTACAGTAATTCAACAAGCTGTCCCACAG...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAACTCTGTGGGACAGCTaGTTGAATTACTGTAACAGG +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQTLWDS*LNYCNR
Trigger: CCTGTTACAGTAATTCAACAAGCTGTCCCACAGAGT...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTATTGGATGCAGAAGTaGTTACATACTGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNYWMQK*LHTVGV
Trigger: CACCCCCACAGTATGTAACAACTTCTGCATCCAATA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATAATTCTGTACTGAAGTaGCTGAGACAATATTGGATG +
Preference number: 5 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNNSVLK*LRQYWM
Trigger: CATCCAATATTGTCTCAGCAACTTCAGTACAGAATT...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGAGCAATAGTAACCATTaGTCCTGTAGCTACCTGAAA +
Preference number: 5 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLSNSNH*SCSYLK
Trigger: TTTCAGGTAGCTACAGGACAAATGGTTACTATTGCT...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp ATGAGATATATTATTCCATACTCTTTCAGCCAGCAAAATGAGTTCTACAAGGTGCTACGCTTTGTTGGGTaGGCTGCTGTGGTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: MRYIIPYSFSQQNEFYKVLRFVG*AAVVVE
Trigger: TTCAACAACCACAGCAGCCAACCCAACAAAGCGTAG...CACCTTGTAGAACTCATTTTGCTGGCTGAAAGAGTATGGAATAATATATCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TCTGTCCAAGCTCTGAGCTTGTACACGACAAACGTTTACAGTGGATACATGTTAATTAGCAAGAACAATTaGGTGAATGGCTGGTGCATA +
Preference number: 5 (lower is better)
Translates to: SVQALSLYTTNVYSGYMLISKNN*VNGWCI
Trigger: TATGCACCAGCCATTCACCAAATTGTTCTTGCTAAT...TAACATGTATCCACTGTAAACGTTTGTCGTGTACAAGCTCAGAGCTTGGACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATCCCTTGGAAAATGGTaGCTGGGCTATTTGAGATCA +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQSLGKW*LGYLRS
Trigger: TGATCTCAAATAGCCCAGCAACCATTTTCCAAGGGA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGGTGCAAAACTCGTATTaGGCACAACTGTTATGGTTA +
Preference number: 5 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLVQNSY*AQLLWL
Trigger: TAACCATAACAGTTGTGCCAAATACGAGTTTTGCAC...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp ATCACAGTTCCACAAAACTGTTTTGACTTTACAGCATCAGTACCTTTGCAGAAGGAACATGTAAACCTGTaGCTTCCTTTGCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: ITVPQNCFDFTASVPLQKEHVNL*LPLLPP
Trigger: AGGAGGAAGCAAAGGAAGCAACAGGTTTACATGTTC...CTTCTGCAAAGGTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAACTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTGAAGGAGGTAGACTaGAGTCACTGTACTTTCTCC +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQLKEVD*SHCTFS
Trigger: GGAGAAAGTACAGTGACTCAAGTCTACCTCCTTCAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATTCCCTTGTGGTTCCATaGGAGATATCTCACCATTTC +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNSLVVP*EISHHF
Trigger: GAAATGGTGAGATATCTCCAATGGAACCACAAGGGA...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp TTTAAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAATTCCTCCATGTTCAGTaGCTGCATGGTAGAAAACCT +
Preference number: 5 (lower is better)
Translates to: FKSSSWPDLGINFWMYLQFLHVQ*LHGRKP
Trigger: AGGTTTTCTACCATGCAGCAACTGAACATGGAGGAA...TTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422737.6
CDS-3UTR CAA 90 bp AAGAGCTCATCATGGCCTGACCTAGGCATAAACTTTTGGATGTATTTGCAAAATCTTCTGACTTCCTGCTaGTCCTGGTTCATCTTGTTT +
Preference number: 5 (lower is better)
Translates to: KSSSWPDLGINFWMYLQNLLTSC*SWFILF
Trigger: AAACAAGATGAACCAGGACAAGCAGGAAGTCAGAAG...ATTTTGCAAATACATCCAAAAGTTTATGCCTAGGTCAGGCCATGATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422737.6
ENST00000477947.1
CDS-3UTR CAA 90 bp TTGGCTACAGAAAACATATTACTCACCTGCGACCACATTCTGAATATTTACCAAGAAAGACAAGGTTTCTaGATCCTCTCCTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: LATENILLTCDHILNIYQERQGF*ILSSEP
Trigger: TGGCTCTGAGGAGAGGATCAAGAAACCTTGTCTTTC...TTGGTAAATATTCAGAATGTGGTCGCAGGTGAGTAATATGTTTTCTGTAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477947.1
CDS-3UTR CAA 90 bp AAAACCAAGCTACTGATTTCTAAACAAAACACACGATCCATAGCTAGATATTGGGAAATGTGGCTGACTTaGAGTCCCCCACTGTGTAAG +
Preference number: 5 (lower is better)
Translates to: KTKLLISKQNTRSIARYWEMWLT*SPPLCK
Trigger: CTTACACAGTGGGGGACTCAAAGTCAGCCACATTTC...CCAATATCTAGCTATGGATCGTGTGTTTTGTTTAGAAATCAGTAGCTTGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp GTAACAGTATGTGAAATGTGGCTGACTTTGAGTCCCCCACTGTGTAAGTGGAATTTCCACAAAACTGTTTaGACTTTACAGCATCAGTAC +
Preference number: 5 (lower is better)
Translates to: VTVCEMWLTLSPPLCKWNFHKTV*TLQHQY
Trigger: GTACTGATGCTGTAAAGTCAAAACAGTTTTGTGGAA...ATTCCACTTACACAGTGGGGGACTCAAAGTCAGCCACATTTCACATACTGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS-3UTR CAA 90 bp GAAATGGTGGTTGGGAGGCCTTCCACATTTTTGGATGCTAATAGAACAGGCAATATGAATGAGAGGGTTTaGCAGAACTTATTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: EMVVGRPSTFLDANRTGNMNERV*QNLLCK
Trigger: TTTGCACAATAAGTTCTGCAAAACCCTCTCATTCAT...ATTGCCTGTTCTATTAGCATCCAAAAATGTGGAAGGCCTCCCAACCACCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334344.11
ENST00000444670.5
ENST00000457135.1
CDS TCA 90 bp ATGAACACCTTGTACAGGAAAAGACATTTGTGTTGCAGTCAGATTTaGAGATTGGTTGGCAACAGGAGTCCTCTGAAAATGGTTTCCTAT +
Preference number: 5 (lower is better)
Translates to: MNTLYRKRHLCCSQI*RLVGNRSPLKMVSY
Trigger: ATAGGAAACCATTTTCAGAGGACTCCTGTTGCCAACCAATCTTCAAATCTGACTGCAACACAAATGTCTTTTCCTGTACAAGGTGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334344.11
ENST00000422737.6
ENST00000444670.5
ENST00000479608.5
CDS-3UTR CAA 90 bp ATCAGCAAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAACTTCTGGGAAAGTaGAACTCTTCAACAATTTCT +
Preference number: 5 (lower is better)
Translates to: ISKFLSSKEHLFMNERVLQLLGK*NSSTIS
Trigger: AGAAATTGTTGAAGAGTTCAACTTTCCCAGAAGTTG...CAAAACCCTCTCATTCATGAAAAGGTGCTCCTTGCTAGACAGAAACTTGCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334344.11
CDS-3UTR CAA 90 bp TATATTCCAATGTGGATGGTACTGAATTCTGATCATACCAGTTTCCATCAGGATGTGTTGCAGTCAGATTaGAAGATTGGTTGGCAACAG +
Preference number: 5 (lower is better)
Translates to: YIPMWMVLNSDHTSFHQDVLQSD*KIGWQQ
Trigger: CTGTTGCCAACCAATCTTCAAATCTGACTGCAACAC...ATCCTGATGGAAACTGGTATGATCAGAATTCAGTACCATCCACATTGGAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334344.11
ENST00000444670.5
CDS-3UTR CAA 90 bp AAGTTTCTGTCTAGCAAGGAGCACCTTTTCATGAATGAGAGGGTTTTGCAGAACAATTCTGTACTGAAGTaGCTGAGACAATATTGGATG +
Preference number: 5 (lower is better)
Translates to: KFLSSKEHLFMNERVLQNNSVLK*LRQYWM
Trigger: CATCCAATATTGTCTCAGCAACTTCAGTACAGAATT...GTTCTGCAAAACCCTCTCATTC