RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARID1A (Homo sapiens)

Ensembl gene IDs: ENSG00000117713

Ensembl transcript IDs: ENST00000324856.13, ENST00000374152.7, ENST00000430291.2, ENST00000430799.7, ENST00000457599.6, ENST00000466382.2, ENST00000524572.1, ENST00000532781.1, ENST00000615191.4, ENST00000636072.1, ENST00000636110.1, ENST00000636219.1, ENST00000636422.1, ENST00000636794.1, ENST00000636958.1, ENST00000637465.1, ENST00000637788.1

Found 1859 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTaGGCCAGGTTGGCCAGCAGTACCACAGCCATCTCCCGGCACACC +
Preference number: 1 (lower is better)
Translates to: LPFCTAMARAARLSP*ARLASSTTAISRHT
Trigger: GGTGTGCCGGGAGATGGCTGTGGTACTGCTGGCCAACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CCA 90 bp GGCAAGCAGCGCGCGGGCAGCCCGCCGCATCATGTCCACACTAGTTaGCTCAAAGGGTGGGTTCTGCATGTGGAGGAGGCTGGCCTGGCT +
Preference number: 1 (lower is better)
Translates to: GKQRAGSPPHHVHTS*LKGWVLHVEEAGLA
Trigger: AGCCAGGCCAGCCTCCTCCACATGCAGAACCCACCCTTTGAGCCAACTAGTGTGGACATGATGCGGCGGGCTGCCCGCGCGCTGCTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CCA 90 bp CCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGGGGCTGGTaGGCAGGGTGCGTGAGGCCGGGAAGGCAGCAGCTCTGTCTTGCT +
Preference number: 1 (lower is better)
Translates to: PWCTLCCCHMLPRGW*AGCVRPGRQQLCLA
Trigger: AGCAAGACAGAGCTGCTGCCTTCCCGGCCTCACGCACCCTGCCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CCA 90 bp TGTCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGGGGCTaGTGGGCAGGGTGCGTGAGGCCGGGAAGGCAGCAGCTCTGTCTT +
Preference number: 1 (lower is better)
Translates to: CPWCTLCCCHMLPRG*WAGCVRPGRQQLCL
Trigger: AAGACAGAGCTGCTGCCTTCCCGGCCTCACGCACCCTGCCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CCA 90 bp CTAGGAAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATaGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGGTTGGCCAGCA +
Preference number: 1 (lower is better)
Translates to: LGSPGGCRYCPSALQ*HELPGCPPEPGWPA
Trigger: TGCTGGCCAACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CCA 90 bp CTAGTTGGCTCAAAGGGTGGGTTCTGCATGTGGAGGAGGCTGGCCTaGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAG +
Preference number: 1 (lower is better)
Translates to: LVGSKGGFCMWRRLA*LCWNCVAARLSSRK
Trigger: CTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAGCCTCCTCCACATGCAGAACCCACCCTTTGAGCCAACTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR GCA 90 bp GGCAAACTGCCCAGTGTAGGAGTCCGTCCAGGACAGGCAGGCAAATaGTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGG +
Preference number: 1 (lower is better)
Translates to: GKLPSVGVRPGQAGK*SRGMEIGPTAPRCW
Trigger: CCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCCTGTCCTGGACGGACTCCTACACTGGGCAGTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CCA 90 bp ACCGAGATGTCCAACAGCCGTGATTCGTACAGAGTAAACTCTGAGTaGTTCTCGTCCACCTTGGCCAAGGCAAGCAGCGCGCGGGCAGCC +
Preference number: 1 (lower is better)
Translates to: TEMSNSRDSYRVNSE*FSSTLAKASSARAA
Trigger: GGCTGCCCGCGCGCTGCTTGCCTTGGCCAAGGTGGACGAGAACCACTCAGAGTTTACTCTGTACGAATCACGGCTGTTGGACATCTCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR GCA 90 bp AGGACAGGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTaGCCCGAGATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGC +
Preference number: 1 (lower is better)
Translates to: RTGRQMLSGYGDRSN*PEMLASVTKVFSRS
Trigger: GCTCCGGGAAAACACCTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR GCA 90 bp AGTATCAGGTGTACAGTACAGTACATGAAAGGGTCTACACTCTACTaGACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAAC +
Preference number: 1 (lower is better)
Translates to: SIRCTVQYMKGSTLY*TGLSSEQGLFTTAN
Trigger: GTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGAGTGTAGACCCTTTCATGTACTGTACTGTACACCTGATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR CCA 90 bp CCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTaGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCC +
Preference number: 1 (lower is better)
Translates to: PKGEAGQHRVNWILR*FCINKGQQSVSKFS
Trigger: GGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
3UTR CCA 90 bp GAGAGACTTTTTCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTaGATTCTGAGGTGGTTTTGCATAAATAAAGGGCAACAGTCAGTT +
Preference number: 1 (lower is better)
Translates to: ERLFPKGEAGQHRVN*ILRWFCINKGQQSV
Trigger: AACTGACTGTTGCCCTTTATTTATGCAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGAAAAAGTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
3UTR TCA 90 bp CAGGGTCTGTTCACAACTGCGAACTTCTTGGCTCCTGCAAGATTGTaGATGTACAACAATAAACCACACACAGTTCAGCAGTCACCTTTT +
Preference number: 1 (lower is better)
Translates to: QGLFTTANFLAPARL*MYNNKPHTVQQSPF
Trigger: AAAAGGTGACTGCTGAACTGTGTGTGGTTTATTGTTGTACATTCACAATCTTGCAGGAGCCAAGAAGTTCGCAGTTGTGAACAGACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR CCA 90 bp AACTCGTCATACTATAAAGGGGTAGCTGGGAGGAGGACCAAACTGTaGGGATCCAAGGGTATGTGCAATGTACAACGTCATATATATACA +
Preference number: 1 (lower is better)
Translates to: NSSYYKGVAGRRTKL*GSKGMCNVQRHIYT
Trigger: TGTATATATATGACGTTGTACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCCTTTATAGTATGACGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR CCA 90 bp TGTCCCCCTGAGCCAGGTTGGCCAGCAGTACCACAGCCATCTCCCGGCACACCGATGCTTCCGAGGGGCTaGTGGGCAGGGTGCGTGAGG +
Preference number: 2 (lower is better)
Translates to: CPPEPGWPAVPQPSPGTPMLPRG*WAGCVR
Trigger: CCTCACGCACCCTGCCCACCAGCCCCTCGGAAGCAT...CGGTGTGCCGGGAGATGGCTGTGGTACTGCTGGCCAACCTGGCTCAGGGGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp AAGGGCAAACTGCCCAGTGTAGGAGTCCGTCCAGGACAGGCAGGCAAATGCTCTGGTGGGCAGGGTGCGTaGGGCCGGGAAGGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: KGKLPSVGVRPGQAGKCSGGQGA*GREGSS
Trigger: GCTGCTGCCTTCCCGGCCTCACGCACCCTGCCCACC...AGAGCATTTGCCTGCCTGTCCTGGACGGACTCCTACACTGGGCAGTTTGCCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp CTGGCCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCGGTGGGGGCCCCTCCTaGTCTGTTGTCCCTGGTGTA +
Preference number: 2 (lower is better)
Translates to: LAWLCWNCVAARLSSRKPGGGPS*SVVPGV
Trigger: TACACCAGGGACAACAGACCAGGAGGGGCCCCCACC...GGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp TGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGGTCCACCAATCCGCCAGTaGAGCAGGCCACTGTCAAAC +
Preference number: 2 (lower is better)
Translates to: CPSALQWHELPGCPPEPGPPIRQ*SRPLSN
Trigger: GTTTGACAGTGGCCTGCTGCACTGGCGGATTGGTGG...ACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CAA 90 bp AGCCGTGATTCGTACAGAGTAAACTCTGAGTGGTTCTCGTCCACCTaGGCCAAGGCAAGCAGCGCGCGGGCAGCCCGCCGCATCATGTCC +
Preference number: 2 (lower is better)
Translates to: SRDSYRVNSEWFSST*AKASSARAARRIMS
Trigger: GGACATGATGCGGCGGGCTGCCCGCGCGCTGCTTGCCTTGGCCAAGGTGGACGAGAACCACTCAGAGTTTACTCTGTACGAATCACGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp CTGGCCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCCCGATACTGCCCTTCTaGACTGCAATGGCACGAGCT +
Preference number: 2 (lower is better)
Translates to: LAWLCWNCVAARLSSRKPPILPF*TAMARA
Trigger: AGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGG...GGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp TCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGGGGCTGGTGGGCAGGAGCAACCCTGGGAGCTaGCTGAGGTTGAAGGTCATG +
Preference number: 2 (lower is better)
Translates to: SLVYPLLLSHASEGLVGRSNPGS*LRLKVM
Trigger: CATGACCTTCAACCTCAGTCAGCTCCCAGGGTTGCT...CCTGCCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466382.2
3UTR-3UTR TCA 90 bp TGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGGTACGCCCAAGCTTATCTaGGCAGTCCACCACAAATGG +
Preference number: 2 (lower is better)
Translates to: CPSALQWHELPGCPPEPGTPKLI*AVHHKW
Trigger: CCATTTGTGGTGGACTGCTCAGATAAGCTTGGGCGT...ACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp CTGAGGGTTTCCAAGACCAGTCTCTGCGGGGAAAGGACGGCATTGGGGCCCAGGGCAGCAGCTCTGTCTTaGTCTCGAAGTGGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: LRVSKTSLCGERTALGPRAAALS*SRSGSG
Trigger: TCCAGACCCACTTCGAGAGCAAGACAGAGCTGCTGC...CCTGGGCCCCAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGAAACCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp TTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCGTTCCGGTGGCTCTGTaGTGGGCTAATGCCAAATGG +
Preference number: 2 (lower is better)
Translates to: LPILPFCTAMARAARLSPVPVAL*WANAKW
Trigger: CCATTTGGCATTAGCCCAGCACAGAGCCACCGGAAC...GGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp AAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCTCTGGGTGCTTGTGGTaGAGCAGGATCAGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: KPRRLPILPFCTAMARAASGCLW*SRISLP
Trigger: GGGCAAGCTGATCCTGCTGCACCACAAGCACCCAGA...GGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp AAGGGCAAACTGCCCAGTGTAGGAGTCCGTCCAGGACAGGCAGGCAAATGCTCTTGGAGGTCCATCAGGTaGGGGCCCCTCCTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: KGKLPSVGVRPGQAGKCSWRSIR*GPLLVC
Trigger: ACAGACCAGGAGGGGCCCCCACCTGATGGACCTCCA...AGAGCATTTGCCTGCCTGTCCTGGACGGACTCCTACACTGGGCAGTTTGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp AGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGTGGAGGTCCATCAGGTaGGGGCCCCTCCTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: RQMLSGYGDRSNCPEMLAWRSIR*GPLLVC
Trigger: ACAGACCAGGAGGGGCCCCCACCTGATGGACCTCCA...CGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp CGGGCAGCCCGCCGCATCATGTCCACACTAGTTGGCTCAAAGGGTGGGTTCTGCCACAGACGCAGCGCTTaGCAAGAGAATCCTGCCAGT +
Preference number: 2 (lower is better)
Translates to: RAARRIMSTLVGSKGGFCHRRSA*QENPAS
Trigger: ACTGGCAGGATTCTCTTGCCAAGCGCTGCGTCTGTG...GCAGAACCCACCCTTTGAGCCAACTAGTGTGGACATGATGCGGCGGGCTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp TCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGAGTGTAACCAAGCAGAAAGGCGTGAGGTaGTGGAGGGAGGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: SGYGDRSNCPEMLASVTKQKGVR*WREGRW
Trigger: CCACCTCCCCTCCCTCCATCACCTCACGCCTTTCTG...CTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp AGGGTTTCCAAGACCAGTCTCTGCGGGGAAAGGACGGCATTGGGGCCCAGGGTGACGCCCAAGCTTATCTaGGCAGTCCACCACAAATGG +
Preference number: 2 (lower is better)
Translates to: RVSKTSLCGERTALGPRVTPKLI*AVHHKW
Trigger: CCATTTGTGGTGGACTGCTCAGATAAGCTTGGGCGT...CACCCTGGGCCCCAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGAAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp CTGAGGGTTTCCAAGACCAGTCTCTGCGGGGAAAGGACGGCATTGGGGCCCAGGGGACAGGCAGGCAAATaGTCTCGGGGTATGGAGATA +
Preference number: 2 (lower is better)
Translates to: LRVSKTSLCGERTALGPRGQAGK*SRGMEI
Trigger: TATCTCCATACCCCGAGAGCATTTGCCTGCCTGTCC...CCTGGGCCCCAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGAAACCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp AGGGTTTCCAAGACCAGTCTCTGCGGGGAAAGGACGGCATTGGGGCCCAGGGTGTGTGATCCGTTTTTCTaGAGGTCCATCAGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: RVSKTSLCGERTALGPRVCDPFF*RSIRWG
Trigger: CCCCCACCTGATGGACCTCCAGAAAAACGGATCACA...CACCCTGGGCCCCAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGAAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp TGGAGGAGGCTGGCCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTGTCTCATCCTTACTGTaGGGTTCGTCCTCTAGGATC +
Preference number: 2 (lower is better)
Translates to: WRRLAWLCWNCVAARLSSVSSLL*GSSSRI
Trigger: GATCCTAGAGGACGAACCCCACAGTAAGGATGAGAC...AGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAGCCTCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp AAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCCTCCTCACTATTCTCTaGAGCTGGCTTGTCCTTGCC +
Preference number: 2 (lower is better)
Translates to: KPRRLPILPFCTAMARAALLTIL*SWLVLA
Trigger: GGCAAGGACAAGCCAGCTTCAGAGAATAGTGAGGAG...GGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp CGGCACACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACGTCCTGGGCTTCAGCTaGAGGGCAAACTGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: RHTGFFRSLRKRTIVLYNVLGFS*RANCPV
Trigger: CACTGGGCAGTTTGCCCTTCAGCTGAAGCCCAGGAC...GTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGTGTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp CCTCCTGGTCTGTTGTCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGCCACCAATCCGCCAGTaGAGCAGGCCACTGTCAAAC +
Preference number: 2 (lower is better)
Translates to: PPGLLSLVYPLLLSHASEPPIRQ*SRPLSN
Trigger: GTTTGACAGTGGCCTGCTGCACTGGCGGATTGGTGG...CTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp GGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTGGACAGGCAGGCAAATaGTCTCGGGGTATGGAGATA +
Preference number: 2 (lower is better)
Translates to: GGCRYCPSALQWHELPGCGQAGK*SRGMEI
Trigger: TATCTCCATACCCCGAGAGCATTTGCCTGCCTGTCC...ACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp TGGAGGAGGCTGGCCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTCAGCACAGGGTAAACTaGATTCTGAGGTGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: WRRLAWLCWNCVAARLSSQHRVN*ILRWFC
Trigger: GCAAAACCACCTCAGAATCCAGTTTACCCTGTGCTG...AGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAGCCTCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp ACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACTTCTCCATGCTTCCGAGGGGCTaGTGGGCAGGGTGCGTGAGG +
Preference number: 2 (lower is better)
Translates to: TGFFRSLRKRTIVLYNFSMLPRG*WAGCVR
Trigger: CCTCACGCACCCTGCCCACCAGCCCCTCGGAAGCAT...GGAGAAGTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp CGGCACACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACGGGAAAGGACGGCATTaGGGCCCAGGGTGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: RHTGFFRSLRKRTIVLYNGKGRH*GPGWKR
Trigger: CCTTTTCCACCCTGGGCCCCAATGCCGTCCTTTCCC...GTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGTGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp ACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACTTCTCCCAGAAAGGCGTGAGGTaGTGGAGGGAGGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: TGFFRSLRKRTIVLYNFSQKGVR*WREGRW
Trigger: CCACCTCCCCTCCCTCCATCACCTCACGCCTTTCTG...GGAGAAGTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp CGAGATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCTCAGCTTGCCCAGGATaGGCAGCAGCCCTGGGTGTT +
Preference number: 2 (lower is better)
Translates to: RDVGECNQGVFPEHLQAVSACPG*AAALGV
Trigger: AACACCCAGGGCTGCTGCTCATCCTGGGCAAGCTGA...GACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp AAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCCCACTGTCAAACTCCTaGACACGCCCAAGCTTATCT +
Preference number: 2 (lower is better)
Translates to: KPRRLPILPFCTAMARAAPLSNS*TRPSLS
Trigger: AGATAAGCTTGGGCGTGTGCAGGAGTTTGACAGTGG...GGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp AAGGGCAAACTGCCCAGTGTAGGAGTCCGTCCAGGACAGGCAGGCAAATGCTCTGCAGCAGCTCTGTCTTaGTCTCGAAGTGGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: KGKLPSVGVRPGQAGKCSAAALS*SRSGSG
Trigger: TCCAGACCCACTTCGAGAGCAAGACAGAGCTGCTGC...AGAGCATTTGCCTGCCTGTCCTGGACGGACTCCTACACTGGGCAGTTTGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp TTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTCCACATTGTTGTCCTaGATGCTGAGTTTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: LPILPFCTAMARAARLSPSTLLS*MLSLLR
Trigger: CCTCAGCAAACTCAGCATCCAGGACAACAATGTGGA...GGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CAA 90 bp TCTTCTTCTTCTTCCCCACCCTCCATGGGAGCTGGACTAGACACCTaGCTGAACCTCCCAGGATCCAGTAGCGTTCTCTGTCCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: SSSSSPPSMGAGLDT*LNLPGSSSVLCPGS
Trigger: TGACCCAGGACAGAGAACGCTACTGGATCCTGGGAGGTTCAGCAAGGTGTCTAGTCCAGCTCCCATGGAGGGTGGGGAAGAAGAAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTACACAGGCCTCTCCAGTaGACAGGGTCTGTTCACAAC +
Preference number: 2 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVHRPLQ*TGSVHN
Trigger: GTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTG...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR TCA 90 bp TCTAGGAAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGACTCCTCACTATTCTCTaGAGCTGGCTTGTCCTTGCC +
Preference number: 2 (lower is better)
Translates to: SRKPRRLPILPFCTAMARLLTIL*SWLVLA
Trigger: GGCAAGGACAAGCCAGCTTCAGAGAATAGTGAGGAG...TCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp CCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCAGGAATTGCCTGGCACAAATaGCAGGCTTCGAATGGTATT +
Preference number: 2 (lower is better)
Translates to: PGSAGTVWRQGCPLGSPGIAWHK*QASNGI
Trigger: AATACCATTCGAAGCCTGTCATTTGTGCCAGGCAAT...TCCTGGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp CGAGATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCTCTGCTGTTGTCACATaGTTCCGAGGGGCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: RDVGECNQGVFPEHLQAVSAVVT*FRGAGG
Trigger: CCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGA...GACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp AGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGCCGGTGGCTCTGTGCTaGGCTAATGCCAAATGGAAA +
Preference number: 2 (lower is better)
Translates to: RQMLSGYGDRSNCPEMLAPVALC*ANAKWK
Trigger: TTTCCATTTGGCATTAGCCCAGCACAGAGCCACCGG...CGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp CGGCACACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACAATGTGGCATCCCGTTaGTGCAAGGACTGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: RHTGFFRSLRKRTIVLYNNVASR*CKDWES
Trigger: GCTTTCCCAGTCCTTGCATCAACGGGATGCCACATT...GTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGTGTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466382.2
3UTR-3UTR GCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTAGGGTCTACACTCTACTaGACAGGCCTCTCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVGSTLY*TGLSSE
Trigger: TTCACTGGAGAGGCCTGTGCAGTAGAGTGTAGACCC...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR CCA 90 bp TCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGAGTGTAACCAAGCTCTCGAAGTGGGTCTaGATATGCTCAGTGGTGTCC +
Preference number: 2 (lower is better)
Translates to: SGYGDRSNCPEMLASVTKLSKWV*ICSVVS
Trigger: GGACACCACTGAGCATATCCAGACCCACTTCGAGAG...CTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp ACAGGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGATCTTGATGTTCCGGTaGCTCTGTGCTGGGCTAATG +
Preference number: 2 (lower is better)
Translates to: TGRQMLSGYGDRSNCPEMILMFR*LCAGLM
Trigger: CATTAGCCCAGCACAGAGCCACCGGAACATCAAGAT...CATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp AATGAGTTCATCAACGGTGATACCGAGATGTCCAACAGCCGTGATTCGTACAGAAGGCTGGCCTGGCTCTaGTGGAACTGTGTGGCGGCA +
Preference number: 2 (lower is better)
Translates to: NEFINGDTEMSNSRDSYRRLAWL*WNCVAA
Trigger: TGCCGCCACACAGTTCCAGCAGAGCCAGGCCAGCCT...TCTGTACGAATCACGGCTGTTGGACATCTCGGTATCACCGTTGATGAACTCATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp GATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCATCTTTTCAAAGAGGGTaGGGTAGGGTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: DVGECNQGVFPEHLQAVPSFQRG*GRVLRG
Trigger: TCCCCTCAGGACCCTACCCCACCCTCTTTGAAAAGA...TGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466382.2
3UTR-3UTR CCA 90 bp GGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTAACAGTTATGAAATGTaGCATCCCGTTGATGCAAGG +
Preference number: 2 (lower is better)
Translates to: GGCRYCPSALQWHELPGCNSYEM*HPVDAR
Trigger: CCTTGCATCAACGGGATGCCACATTTCATAACTGTT...ACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466382.2
3UTR-3UTR CCA 90 bp ATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCACACCCTCCATGGGAGCTaGACTAGACACCTTGCTGAA +
Preference number: 2 (lower is better)
Translates to: MLASVTKVFSRSISKQSHTLHGS*TRHLAE
Trigger: TTCAGCAAGGTGTCTAGTCCAGCTCCCATGGAGGGT...GTGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp TCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGAGTGTAACCAAGGTCTCATCCTTACTGTaGGGTTCGTCCTCTAGGATC +
Preference number: 2 (lower is better)
Translates to: SGYGDRSNCPEMLASVTKVSSLL*GSSSRI
Trigger: GATCCTAGAGGACGAACCCCACAGTAAGGATGAGAC...CTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp CGGCACACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACGCAGCCCTGGGTGTTTaGACATCTCAAAGTCATTGC +
Preference number: 2 (lower is better)
Translates to: RHTGFFRSLRKRTIVLYNAALGV*TSQSHC
Trigger: GCAATGACTTTGAGATGTCCAAACACCCAGGGCTGC...GTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGTGTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CAA 90 bp TGGCTCTGTGCTGGGCTAATGCCAAATGGAAACTTGCTGCTCTCCTaGATGGCCTCTGAACTCTTAGCTCCATCCTCGGTCAAGGTGCTA +
Preference number: 2 (lower is better)
Translates to: WLCAGLMPNGNLLLS*MASELLAPSSVKVL
Trigger: TAGCACCTTGACCGAGGATGGAGCTAAGAGTTCAGAGGCCATCAAGGAGAGCAGCAAGTTTCCATTTGGCATTAGCCCAGCACAGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTAATGTGGCATCCCGTTaGTGCAAGGACTGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: STAQASPVNRVCSQLRTSNVASR*CKDWES
Trigger: GCTTTCCCAGTCCTTGCATCAACGGGATGCCACATT...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR CCA 90 bp ACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACTTCTCCGGCTTCGAATGGTATTaGACACACAGACGCAGCGCT +
Preference number: 2 (lower is better)
Translates to: TGFFRSLRKRTIVLYNFSGFEWY*THRRSA
Trigger: AGCGCTGCGTCTGTGTGTCCAATACCATTCGAAGCC...GGAGAAGTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCAGAAAGGCGTGAGGTaGTGGAGGGAGGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKQKGVR*WREGRW
Trigger: CCACCTCCCCTCCCTCCATCACCTCACGCCTTTCTG...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
3UTR-3UTR TCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTACAGAAAGGCGTGAGGTaGTGGAGGGAGGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLQKGVR*WREGRW
Trigger: CCACCTCCCCTCCCTCCATCACCTCACGCCTTTCTG...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
3UTR-3UTR GCA 90 bp CCGGTGGCTCTGTGCTGGGCTAATGCCAAATGGAAACTTGCTGCTCTCCTTGATAAGCTGGCTTGTCCTTaGCTGAAAAGGCTATCTCCT +
Preference number: 2 (lower is better)
Translates to: PVALCWANAKWKLAALLDKLACP*LKRLSP
Trigger: AGGAGATAGCCTTTTCAGGCAAGGACAAGCCAGCTT...ATCAAGGAGAGCAGCAAGTTTCCATTTGGCATTAGCCCAGCACAGAGCCACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp CGAGATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCAAGCTGGCTTGTCCTTaGCTGAAAAGGCTATCTCCT +
Preference number: 2 (lower is better)
Translates to: RDVGECNQGVFPEHLQAVKLACP*LKRLSP
Trigger: AGGAGATAGCCTTTTCAGGCAAGGACAAGCCAGCTT...GACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCTCCCAAGGGAGAAGCTaGACAGCACAGGGTAAACTG +
Preference number: 2 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDISQGRS*TAQGKL
Trigger: CAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR CCA 90 bp GTCAAGGTGCTAGACCGAGTAGACAACATGTCATCCATAGTGGCTGTGATCCGTACCCTCCATGGGAGCTaGACTAGACACCTTGCTGAA +
Preference number: 2 (lower is better)
Translates to: VKVLDRVDNMSSIVAVIRTLHGS*TRHLAE
Trigger: TTCAGCAAGGTGTCTAGTCCAGCTCCCATGGAGGGT...ACGGATCACAGCCACTATGGATGACATGTTGTCTACTCGGTCTAGCACCTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp GGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCTGTACGATCTTTACTaGAAGCTTGTCAAACTTACT +
Preference number: 2 (lower is better)
Translates to: GGCRYCPSALQWHELPGCLYDLY*KLVKLT
Trigger: AGTAAGTTTGACAAGCTTCCAGTAAAGATCGTACAG...ACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp ACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACTTCTCCATCTTGATGTTCCGGTaGCTCTGTGCTGGGCTAATG +
Preference number: 2 (lower is better)
Translates to: TGFFRSLRKRTIVLYNFSILMFR*LCAGLM
Trigger: CATTAGCCCAGCACAGAGCCACCGGAACATCAAGAT...GGAGAAGTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCGTTCTGGGTGCTTGTaGTGCAGCAGGATCAGCTTG +
Preference number: 2 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGRSGCL*CSRISL
Trigger: CAAGCTGATCCTGCTGCACCACAAGCACCCAGAACG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTCTGCTGGAACTGTGTaGCGGCAAGGCTGTCCTCTA +
Preference number: 2 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGSAGTV*RQGCPL
Trigger: TAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCTGAGGGGAGTAAGGTaGGGACAAGGAACAGAAAGG +
Preference number: 2 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGLRGVR*GQGTER
Trigger: CCTTTCTGTTCCTTGTCCTCACCTTACTCCCCTCAG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
3UTR-3UTR TCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTAATGTGGCATCCCGTTaGTGCAAGGACTGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGNVASR*CKDWES
Trigger: GCTTTCCCAGTCCTTGCATCAACGGGATGCCACATT...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR GCA 90 bp GTCAAGGTGCTAGACCGAGTAGACAACATGTCATCCATAGTGGCTGTGATCCGTCCACTGTCAAACTCCTaGACACGCCCAAGCTTATCT +
Preference number: 2 (lower is better)
Translates to: VKVLDRVDNMSSIVAVIRPLSNS*TRPSLS
Trigger: AGATAAGCTTGGGCGTGTGCAGGAGTTTGACAGTGG...ACGGATCACAGCCACTATGGATGACATGTTGTCTACTCGGTCTAGCACCTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp GATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCAACATCTCAAAGTCATTaGCTGGCACAAATGACAGGC +
Preference number: 2 (lower is better)
Translates to: DVGECNQGVFPEHLQAVPTSQSH*LAQMTG
Trigger: GCCTGTCATTTGTGCCAGGCAATGACTTTGAGATGT...TGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp CGAGATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCACATCTCAAAGTCATTaGCTGGCACAAATGACAGGC +
Preference number: 2 (lower is better)
Translates to: RDVGECNQGVFPEHLQAVTSQSH*LAQMTG
Trigger: GCCTGTCATTTGTGCCAGGCAATGACTTTGAGATGT...GACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTCACAGGCCTCTCCAGTaGACAGGGTCTGTTCACAAC +
Preference number: 2 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCHRPLQ*TGSVHN
Trigger: GTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTG...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR TCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTACTACAGCTTGCTGCTaGCCCAGCGTTTTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGTTACC*PSVFCF
Trigger: GAAACAGAAAACGCTGGGTCAGCAGCAAGCTGTAGT...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR GCA 90 bp CAAATGACTTGTGAAACCAATGAGTTCATCAACGGTGATACCGAGATGTCCAACTCTGCTGTTGTCACATaGTTCCGAGGGGCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: QMTCETNEFINGDTEMSNSAVVT*FRGAGG
Trigger: CCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGA...GTTGGACATCTCGGTATCACCGTTGATGAACTCATTGGTTTCACAAGTCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp CAAATGACTTGTGAAACCAATGAGTTCATCAACGGTGATACCGAGATGTCCAACACTGCCCTTCTGCACTaGAATGGCACGAGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: QMTCETNEFINGDTEMSNTALLH*NGTSCQ
Trigger: CTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT...GTTGGACATCTCGGTATCACCGTTGATGAACTCATTGGTTTCACAAGTCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp GATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCAGCAGTCCACCACAAATaGATCATTCTTCTGTACGAT +
Preference number: 2 (lower is better)
Translates to: DVGECNQGVFPEHLQAVPAVHHK*IILLYD
Trigger: ATCGTACAGAAGAATGATCCATTTGTGGTGGACTGC...TGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp AATGAGTTCATCAACGGTGATACCGAGATGTCCAACAGCCGTGATTCGTACAGATGTGATCCGTTTTTCTaGAGGTCCATCAGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: NEFINGDTEMSNSRDSYRCDPFF*RSIRWG
Trigger: CCCCCACCTGATGGACCTCCAGAAAAACGGATCACA...TCTGTACGAATCACGGCTGTTGGACATCTCGGTATCACCGTTGATGAACTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCAGCACAGGGTAAACTaGATTCTGAGGTGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGQHRVN*ILRWFC
Trigger: GCAAAACCACCTCAGAATCCAGTTTACCCTGTGCTG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
3UTR-3UTR CCA 90 bp AATGAGTTCATCAACGGTGATACCGAGATGTCCAACAGCCGTGATTCGTACAGACATGTCCACACTAGTTaGCTCAAAGGGTGGGTTCTG +
Preference number: 2 (lower is better)
Translates to: NEFINGDTEMSNSRDSYRHVHTS*LKGWVL
Trigger: CAGAACCCACCCTTTGAGCCAACTAGTGTGGACATG...TCTGTACGAATCACGGCTGTTGGACATCTCGGTATCACCGTTGATGAACTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp CGAGATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCATACTCCTTTAAAATaGCAAAGATCTCAATCAGGC +
Preference number: 2 (lower is better)
Translates to: RDVGECNQGVFPEHLQAVHTPLK*QRSQSG
Trigger: GCCTGATTGAGATCTTTGGCATTTTAAAGGAGTATG...GACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp AATGAGTTCATCAACGGTGATACCGAGATGTCCAACAGCCGTGATTCGTACAGACAGCACAGGGTAAACTaGATTCTGAGGTGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: NEFINGDTEMSNSRDSYRQHRVN*ILRWFC
Trigger: GCAAAACCACCTCAGAATCCAGTTTACCCTGTGCTG...TCTGTACGAATCACGGCTGTTGGACATCTCGGTATCACCGTTGATGAACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATCCCAAGGGAGAAGCTaGACAGCACAGGGTAAACTG +
Preference number: 2 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLSQGRS*TAQGKL
Trigger: CAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
3UTR-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGTCTTTTCAAAGAGGGTaGGGTAGGGTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKSFQRG*GRVLRG
Trigger: TCCCCTCAGGACCCTACCCCACCCTCTTTGAAAAGA...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
3UTR-3UTR CCA 90 bp CAAATGACTTGTGAAACCAATGAGTTCATCAACGGTGATACCGAGATGTCCAACGGCTTCGAATGGTATTaGACACACAGACGCAGCGCT +
Preference number: 2 (lower is better)
Translates to: QMTCETNEFINGDTEMSNGFEWY*THRRSA
Trigger: AGCGCTGCGTCTGTGTGTCCAATACCATTCGAAGCC...GTTGGACATCTCGGTATCACCGTTGATGAACTCATTGGTTTCACAAGTCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CCA 90 bp CAAATGACTTGTGAAACCAATGAGTTCATCAACGGTGATACCGAGATGTCCAACTTGCAGCTCACCCCTTaGTCCTGTTCCTCCTCCTTT +
Preference number: 2 (lower is better)
Translates to: QMTCETNEFINGDTEMSNLQLTP*SCSSSF
Trigger: AAAGGAGGAGGAACAGGACCAAGGGGTGAGCTGCAA...GTTGGACATCTCGGTATCACCGTTGATGAACTCATTGGTTTCACAAGTCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGCTCCTGCAAGATTGTaGATGTACAACAATAAACCA +
Preference number: 2 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIAPARL*MYNNKP
Trigger: TGGTTTATTGTTGTACATTCACAATCTTGCAGGAGC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR CCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTCAACTGCGAACTTCTTaGCTCCTGCAAGATTGTGAA +
Preference number: 2 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCQLRTS*LLQDCE
Trigger: TTCACAATCTTGCAGGAGCCAAGAAGTTCGCAGTTG...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR CAA 90 bp TTACTGATCAGCTTCTCCTCACTATTCTCTGAAGCTGGCTTGTCCTaGCCTGAAAAGGCTATCTCCTCATCATTTTCAACTACTTCCTCT +
Preference number: 2 (lower is better)
Translates to: LLISFSSLFSEAGLS*PEKAISSSFSTTSS
Trigger: AGAGGAAGTAGTTGAAAATGATGAGGAGATAGCCTTTTCAGGCAAGGACAAGCCAGCTTCAGAGAATAGTGAGGAGAAGCTGATCAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CAA 90 bp TCAAACTTACTGATCAGCTTCTCCTCACTATTCTCTGAAGCTGGCTaGTCCTTGCCTGAAAAGGCTATCTCCTCATCATTTTCAACTACT +
Preference number: 2 (lower is better)
Translates to: SNLLISFSSLFSEAG*SLPEKAISSSFSTT
Trigger: AGTAGTTGAAAATGATGAGGAGATAGCCTTTTCAGGCAAGGACAAGCCAGCTTCAGAGAATAGTGAGGAGAAGCTGATCAGTAAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp TTATCTGAGCAGTCCACCACAAATGGATCATTCTTCTGTACGATCTTTACTGGACATACAGCAGGATGTTaGTGGTATCTAATGCCCATG +
Preference number: 2 (lower is better)
Translates to: LSEQSTTNGSFFCTIFTGHTAGC*WYLMPM
Trigger: CATGGGCATTAGATACCATCAACATCCTGCTGTATG...TCCAGTAAAGATCGTACAGAAGAATGATCCATTTGTGGTGGACTGCTCAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466382.2
3UTR-3UTR GCA 90 bp TACTCCTTTAAAATGCCAAAGATCTCAATCAGGCATCGTCGGAAATATTCTACATATCTAATGCCCATGTaGTCTCTGCCAGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: YSFKMPKISIRHRRKYSTYLMPM*SLPGDQ
Trigger: CTGGTCTCCTGGCAGAGAGCACATGGGCATTAGATA...TGTAGAATATTTCCGACGATGCCTGATTGAGATCTTTGGCATTTTAAAGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466382.2
3UTR CAA 90 bp TCCACCACAAATGGATCATTCTTCTGTACGATCTTTACTGGAAGCTaGTCAAACTTACTGATCAGCTTCTCCTCACTATTCTCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: STTNGSFFCTIFTGS*SNLLISFSSLFSEA
Trigger: AGCTTCAGAGAATAGTGAGGAGAAGCTGATCAGTAAGTTTGACAAGCTTCCAGTAAAGATCGTACAGAAGAATGATCCATTTGTGGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR TCA 90 bp TTATCTGAGCAGTCCACCACAAATGGATCATTCTTCTGTACGATCTTTACTGGAGCTTGTCAAACTTACTaGTCAGCTTCTCCTCACTAT +
Preference number: 2 (lower is better)
Translates to: LSEQSTTNGSFFCTIFTGACQTY*SASPHY
Trigger: ATAGTGAGGAGAAGCTGATCAGTAAGTTTGACAAGC...TCCAGTAAAGATCGTACAGAAGAATGATCCATTTGTGGTGGACTGCTCAGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR GCA 90 bp ATTACAGTATGTTTACAGTATCAGGTGTACAGTACAGTACATGAAAGGGTCTACGAACTTCTTGGCTCCTaGAAGATTGTGAATGTACAA +
Preference number: 2 (lower is better)
Translates to: ITVCLQYQVYSTVHERVYELLGS*KIVNVQ
Trigger: TTGTACATTCACAATCTTGCAGGAGCCAAGAAGTTC...GTAGACCCTTTCATGTACTGTACTGTACACCTGATACTGTAAACATACTGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR GCA 90 bp AATGGATCATTCTTCTGTACGATCTTTACTGGAAGCTTGTCAAACTTACTGATCCATACTCCTTTAAAATaGCAAAGATCTCAATCAGGC +
Preference number: 2 (lower is better)
Translates to: NGSFFCTIFTGSLSNLLIHTPLK*QRSQSG
Trigger: GCCTGATTGAGATCTTTGGCATTTTAAAGGAGTATG...GATCAGTAAGTTTGACAAGCTTCCAGTAAAGATCGTACAGAAGAATGATCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CCA 72 bp TGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGGTTaGCCAGCAGTACCACAGCCATCTCCCGGCACACCG +
Preference number: 3 (lower is better)
Translates to: WHELPGCPPEPG*PAVPQPSPGTP
Trigger: CGGTGTGCCGGGAGATGGCTGTGGTACTGCTGGCCAACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CCA 72 bp TGTACCCTCTGCTGTTGTCACATGCTTCCGAGGGGCTaGTGGGCAGGGTGCGTGAGGCCGGGAAGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: CTLCCCHMLPRG*WAGCVRPGRQQ
Trigger: CTGCTGCCTTCCCGGCCTCACGCACCCTGCCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGAGGGTACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR GCA 72 bp GAAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTaGAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: EAQEVADTALLH*NGTSCQAVPLS
Trigger: GCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CCA 72 bp CCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATaGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGGT +
Preference number: 3 (lower is better)
Translates to: PGGCRYCPSALQ*HELPGCPPEPG
Trigger: ACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CCA 72 bp CGCGCGGGCAGCCCGCCGCATCATGTCCACACTAGTTaGCTCAAAGGGTGGGTTCTGCATGTGGAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: RAGSPPHHVHTS*LKGWVLHVEEA
Trigger: AGCCTCCTCCACATGCAGAACCCACCCTTTGAGCCAACTAGTGTGGACATGATGCGGCGGGCTGCCCGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp TTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCGCCCCTCCTGGTCTGTaGTCCCTGGTGTACCCTCTG +
Preference number: 3 (lower is better)
Translates to: LPILPFCTAMARAARLSPAPPGL*SLVYPL
Trigger: CAGAGGGTACACCAGGGACAACAGACCAGGAGGGGC...GGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp TGGAGGAGGCTGGCCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTTGCAGCAGGATCAGCTaGCCCAGGATGAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: WRRLAWLCWNCVAARLSSCSRIS*PRMSSS
Trigger: GCTGCTGCTCATCCTGGGCAAGCTGATCCTGCTGCA...AGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAGCCTCCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp TGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGGTTTCCGTTCTGGGTGCTaGTGGTGCAGCAGGATCAGC +
Preference number: 3 (lower is better)
Translates to: CPSALQWHELPGCPPEPGFRSGC*WCSRIS
Trigger: GCTGATCCTGCTGCACCACAAGCACCCAGAACGGAA...ACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR GCA 72 bp TCTAGGAAGCCCAGGAGGTTGCCGATACTGCCCTTCTaGACTGCAATGGCACGAGCTGCCAGGCTGTCCCCC +
Preference number: 3 (lower is better)
Translates to: SRKPRRLPILPF*TAMARAARLSP
Trigger: GGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCCTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp CTGGCCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCAGGCTTCGAATGGTATaGGACACACAGACGCAGCGC +
Preference number: 3 (lower is better)
Translates to: LAWLCWNCVAARLSSRKPRLRMV*DTQTQR
Trigger: GCGCTGCGTCTGTGTGTCCAATACCATTCGAAGCCT...GGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp TGGAGGAGGCTGGCCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTTCCTGGATGCTGAGTTaGCTGAGGGTTTCCAAGACC +
Preference number: 3 (lower is better)
Translates to: WRRLAWLCWNCVAARLSSSWMLS*LRVSKT
Trigger: GGTCTTGGAAACCCTCAGCAAACTCAGCATCCAGGA...AGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAGCCTCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR GCA 72 bp GTTAGTGGTGCCTGCTTCCGTTCTGGGTGCTTGTGGTaGAGCAGGATCAGCTTGCCCAGGATGAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: VSGACFRSGCLW*SRISLPRMSSS
Trigger: GCTGCTGCTCATCCTGGGCAAGCTGATCCTGCTGCACCACAAGCACCCAGAACGGAAGCAGGCACCACTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp TCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGGGGCTGGTGGGCAGGGAAGCTGGCTTGTCCTaGCCTGAAAAGGCTATCTCC +
Preference number: 3 (lower is better)
Translates to: SLVYPLLLSHASEGLVGREAGLS*PEKAIS
Trigger: GGAGATAGCCTTTTCAGGCAAGGACAAGCCAGCTTC...CCTGCCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp TGTCCCCCTGAGCCAGGTTGGCCAGCAGTACCACAGCCATCTCCCGGCACACCGGACATCTCAAAGTCATaGCCTGGCACAAATGACAGG +
Preference number: 3 (lower is better)
Translates to: CPPEPGWPAVPQPSPGTPDISKS*PGTNDR
Trigger: CCTGTCATTTGTGCCAGGCAATGACTTTGAGATGTC...CGGTGTGCCGGGAGATGGCTGTGGTACTGCTGGCCAACCTGGCTCAGGGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp CGGCACACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACGGCAGCAGCTCTGTCTaGCTCTCGAAGTGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: RHTGFFRSLRKRTIVLYNGSSSV*LSKWVW
Trigger: CCAGACCCACTTCGAGAGCAAGACAGAGCTGCTGCC...GTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGTGTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR GCA 72 bp CCAATCCGCCAGTGCAGCAGGCCACTGTCAAACTCCTaGACACGCCCAAGCTTATCTGAGCAGTCCACCACA +
Preference number: 3 (lower is better)
Translates to: PIRQCSRPLSNS*TRPSLSEQSTT
Trigger: TGTGGTGGACTGCTCAGATAAGCTTGGGCGTGTGCAGGAGTTTGACAGTGGCCTGCTGCACTGGCGGATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR GCA 72 bp ATGCTGAGTTTGCTGAGGGTTTCCAAGACCAGTCTCTaGGGGGAAAGGACGGCATTGGGGCCCAGGGTGGAA +
Preference number: 3 (lower is better)
Translates to: MLSLLRVSKTSL*GERTALGPRVE
Trigger: TTCCACCCTGGGCCCCAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGAAACCCTCAGCAAACTCAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CCA 72 bp GGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTaGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTC +
Preference number: 3 (lower is better)
Translates to: GVCHGKATSLRG*PSDLCAAFHLF
Trigger: GAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
3UTR-3UTR CAA 90 bp CTGGCCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCTATGTAGGCAGAGCTTaGTCTTTTCAAAGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: LAWLCWNCVAARLSSRKPYVGRA*SFQRGW
Trigger: CCACCCTCTTTGAAAAGACAAAGCTCTGCCTACATA...GGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466382.2
3UTR-3UTR CAA 90 bp GGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTTTCTCTGAAGCTGGCTaGTCCTTGCCTGAAAAGGCT +
Preference number: 3 (lower is better)
Translates to: GGCRYCPSALQWHELPGCFSEAG*SLPEKA
Trigger: AGCCTTTTCAGGCAAGGACAAGCCAGCTTCAGAGAA...ACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp AAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCTTCTCTGAAGCTGGCTaGTCCTTGCCTGAAAAGGCT +
Preference number: 3 (lower is better)
Translates to: KPRRLPILPFCTAMARAAFSEAG*SLPEKA
Trigger: AGCCTTTTCAGGCAAGGACAAGCCAGCTTCAGAGAA...GGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR TCA 72 bp CAAAGAGGGTGGGGTAGGGTCCTGAGGGGAGTAAGGTaGGGACAAGGAACAGAAAGGCGTGAGGTGATGGAG +
Preference number: 3 (lower is better)
Translates to: QRGWGRVLRGVR*GQGTERREVME
Trigger: CTCCATCACCTCACGCCTTTCTGTTCCTTGTCCTCACCTTACTCCCCTCAGGACCCTACCCCACCCTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
3UTR-3UTR CAA 90 bp GGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGAAGCTGGCTTGTCCTaGCCTGAAAAGGCTATCTCC +
Preference number: 3 (lower is better)
Translates to: GRQMLSGYGDRSNCPEMLEAGLS*PEKAIS
Trigger: GGAGATAGCCTTTTCAGGCAAGGACAAGCCAGCTTC...CAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp GATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCAGTGTACCCTCTGCTGTaGTCACATGCTTCCGAGGGG +
Preference number: 3 (lower is better)
Translates to: DVGECNQGVFPEHLQAVPVYPLL*SHASEG
Trigger: CCCCTCGGAAGCATGTGACAACAGCAGAGGGTACAC...TGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp ATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCACGTGTACCCTCTGCTGTaGTCACATGCTTCCGAGGGG +
Preference number: 3 (lower is better)
Translates to: MLASVTKVFSRSISKQSHVYPLL*SHASEG
Trigger: CCCCTCGGAAGCATGTGACAACAGCAGAGGGTACAC...GTGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp GGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTAACTTGCTGCTCTCCTaGATGGCCTCTGAACTCTTA +
Preference number: 3 (lower is better)
Translates to: GGCRYCPSALQWHELPGCNLLLS*MASELL
Trigger: TAAGAGTTCAGAGGCCATCAAGGAGAGCAGCAAGTT...ACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CCA 72 bp TCCAACAGCCGTGATTCGTACAGAGTAAACTCTGAGTaGTTCTCGTCCACCTTGGCCAAGGCAAGCAGCGCG +
Preference number: 3 (lower is better)
Translates to: SNSRDSYRVNSE*FSSTLAKASSA
Trigger: CGCGCTGCTTGCCTTGGCCAAGGTGGACGAGAACCACTCAGAGTTTACTCTGTACGAATCACGGCTGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGAGGAAGCCCAGGAGGTaGCCGATACTGCCCTTCTGC +
Preference number: 3 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGRKPRR*PILPFC
Trigger: GCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCCT...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR GCA 72 bp AGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTaGCCCGAGATGTTGGCGAGTGTAACCAAGGTGTTT +
Preference number: 3 (lower is better)
Translates to: RQMLSGYGDRSN*PEMLASVTKVF
Trigger: AAACACCTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp AATGAGTTCATCAACGGTGATACCGAGATGTCCAACAGCCGTGATTCGTACAGAGCTGGACTAGACACCTaGCTGAACCTCCCAGGATCC +
Preference number: 3 (lower is better)
Translates to: NEFINGDTEMSNSRDSYRAGLDT*LNLPGS
Trigger: GGATCCTGGGAGGTTCAGCAAGGTGTCTAGTCCAGC...TCTGTACGAATCACGGCTGTTGGACATCTCGGTATCACCGTTGATGAACTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTTATGTAGGCAGAGCTTaGTCTTTTCAAAGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: STAQASPVNRVCSQLRTSYVGRA*SFQRGW
Trigger: CCACCCTCTTTGAAAAGACAAAGCTCTGCCTACATA...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR CAA 90 bp TCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGAGTGTAACCAAGATCTTTACTGGAAGCTaGTCAAACTTACTGATCAGC +
Preference number: 3 (lower is better)
Translates to: SGYGDRSNCPEMLASVTKIFTGS*SNLLIS
Trigger: GCTGATCAGTAAGTTTGACAAGCTTCCAGTAAAGAT...CTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR GCA 72 bp TGTACAGTACAGTACATGAAAGGGTCTACACTCTACTaGACAGGCCTCTCCAGTGAACAGGGTCTGTTCACA +
Preference number: 3 (lower is better)
Translates to: CTVQYMKGSTLY*TGLSSEQGLFT
Trigger: TGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGAGTGTAGACCCTTTCATGTACTGTACTGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR CCA 72 bp TACTATAAAGGGGTAGCTGGGAGGAGGACCAAACTGTaGGGATCCAAGGGTATGTGCAATGTACAACGTCAT +
Preference number: 3 (lower is better)
Translates to: YYKGVAGRRTKL*GSKGMCNVQRH
Trigger: ATGACGTTGTACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCCTTTATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR CAA 90 bp AATGAGTTCATCAACGGTGATACCGAGATGTCCAACAGCCGTGATTCGTACAGAGACATCTCAAAGTCATaGCCTGGCACAAATGACAGG +
Preference number: 3 (lower is better)
Translates to: NEFINGDTEMSNSRDSYRDISKS*PGTNDR
Trigger: CCTGTCATTTGTGCCAGGCAATGACTTTGAGATGTC...TCTGTACGAATCACGGCTGTTGGACATCTCGGTATCACCGTTGATGAACTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR-3UTR CAA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAATATGTAGGCAGAGCTTaGTCTTTTCAAAGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: RRERGQGVVGSHMILWGKYVGRA*SFQRGW
Trigger: CCACCCTCTTTGAAAAGACAAAGCTCTGCCTACATA...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR CAA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAATTTAAAAACTACAGCTaGCTGCTGACCCAGCGTTTT +
Preference number: 3 (lower is better)
Translates to: RRERGQGVVGSHMILWGKFKNYS*LLTQRF
Trigger: AAAACGCTGGGTCAGCAGCAAGCTGTAGTTTTTAAA...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR TCA 72 bp CCGCTGCAGCTAAAGGTTAAAACCAGTTCTAAGAGGTaGTCTCAGGGTTATTCATACAATCAAGGAGGAGAG +
Preference number: 3 (lower is better)
Translates to: PLQLKVKTSSKR*SQGYSYNQGGE
Trigger: CTCTCCTCCTTGATTGTATGAATAACCCTGAGATCACCTCTTAGAACTGGTTTTAACCTTTAGCTGCAGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR TCA 72 bp TTCACAACTGCGAACTTCTTGGCTCCTGCAAGATTGTaGATGTACAACAATAAACCACACACAGTTCAGCAG +
Preference number: 3 (lower is better)
Translates to: FTTANFLAPARL*MYNNKPHTVQQ
Trigger: CTGCTGAACTGTGTGTGGTTTATTGTTGTACATTCACAATCTTGCAGGAGCCAAGAAGTTCGCAGTTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
3UTR-3UTR CAA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATCATACAGCAGGATGTaGATGGTATCTAATGCCCAT +
Preference number: 3 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPSYSRM*MVSNAH
Trigger: ATGGGCATTAGATACCATCAACATCCTGCTGTATGA...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466382.2
3UTR CCA 72 bp CACCACAAATGGATCATTCTTCTGTACGATCTTTACTaGAAGCTTGTCAAACTTACTGATCAGCTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: HHKWIILLYDLY*KLVKLTDQLLL
Trigger: GAGGAGAAGCTGATCAGTAAGTTTGACAAGCTTCCAGTAAAGATCGTACAGAAGAATGATCCATTTGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp CATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCCCGCCCATGGCACTCTaGGCCCGGCCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: HMGAGVCHGKATSLRGWPPPMAL*ARPCMV
Trigger: GACCATGCAGGGCCGGGCGCAGAGTGCCATGGGCGG...GGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGCGCCCGGCCCTGCATaGTCATCGGGTACCGCTGCG +
Preference number: 4 (lower is better)
Translates to: MGAGVCHGKATSLRGWPSAPGPA*SSGTAA
Trigger: CGCAGCGGTACCCGATGACCATGCAGGGCCGGGCGC...AGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTCTGGCAGGCTGGGGCTaGGCTGGGGGCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GTIWGLACAMGRPRAFVVLAGWG*AGGNCC
Trigger: GCAGCAGTTGCCCCCAGCCCAGCCCCAGCCTGCCAG...AACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AGAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGCTCTGCGCCCGGCCCTaGATGGTCATCGGGTACCGC +
Preference number: 4 (lower is better)
Translates to: RGTIWGLACAMGRPRAFVLCARP*MVIGYR
Trigger: GCGGTACCCGATGACCATGCAGGGCCGGGCGCAGAG...CACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp ATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTGGGAAGGGCCTCGGATaGCAGGCAGGTGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: IWGLACAMGRPRAFVVGPGKGLG*QAGEGR
Trigger: CCTCCCCTCACCTGCCTGGCATCCGAGGCCCTTCCC...AGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCAAGGCTGAGCCGGGCTaGGGGGAACTGTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLACAMGRPRAFVVGPLIKAEPG*GELYWG
Trigger: GCCCCAGTACAGTTCCCCCCAGCCCGGCTCAGCCTT...GATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AGAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGAGGCTGGGGCTGGGCTaGGGGCAACTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RGTIWGLACAMGRPRAFVRLGLG*GQLLLL
Trigger: CAGCAGCAGCAGTTGCCCCCAGCCCAGCCCCAGCCT...CACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCCAGCTTGTTGCTGGCTaGCAGGCTGGGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HMGAGVCHGKATSLRGWPQLVAG*QAGAGL
Trigger: CAGCCCAGCCCCAGCCTGCCAGCCAGCAACAAGCTG...GGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp CCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCTGGCTCTGGGGGTGCTaGTGTGTCGTCGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: PYGGWRVPWEGHEPSWLAWLWGC*CVVDCW
Trigger: CCAGCAGTCGACGACACAGCAGCACCCCCAGAGCCA...GGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp TATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCGAGGTGGCATCTGGTTaGCTGGCACTGCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: YGGWRVPWEGHEPSWLALEVASG*LALQQA
Trigger: CGCCTGCTGCAGTGCCAGGCAACCAGATGCCACCTC...GAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGGCTGTGGGGCCCCAGTaGTCATGTTTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: EGPYGGWRVPWEGHEPSWAVGPQ*SCFPQA
Trigger: GGCCTGAGGGAAACATGAGCACTGGGGCCCCACAGC...CCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCGGTCTGGGACCCGTATaGCTGCCCTGGGTACCCATG +
Preference number: 4 (lower is better)
Translates to: HMGAGVCHGKATSLRGWPGLGPV*LPWVPM
Trigger: CATGGGTACCCAGGGCAGCCATACGGGTCCCAGACC...GGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp TATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCGGCCGAGGTGGCATCTaGTTGCCTGGCACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: YGGWRVPWEGHEPSWLALGRGGI*LPGTAA
Trigger: TGCTGCAGTGCCAGGCAACCAGATGCCACCTCGGCC...GAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGATGCTTCCGAGGGGCTaGTGGGCAGGGTGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: TALLHCNGTSCQAVPLSQMLPRG*WAGCVR
Trigger: CCTCACGCACCCTGCCCACCAGCCCCTCGGAAGCAT...CTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCCCGGTTCATGCCCCCTaGTGGGGACACATCCCTGAC +
Preference number: 4 (lower is better)
Translates to: YGGWRVPWEGHEPSWLALPVHAP*WGHIPD
Trigger: GTCAGGGATGTGTCCCCACCAGGGGGCATGAACCGG...GAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp ATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTTCCTTGCTGCGGTCCTaGCGGAGGTCCCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: IWGLACAMGRPRAFVVGPSLLRS*RRSLLL
Trigger: CAGCAACAGGGACCTCCGTCAGGACCGCAGCAAGGA...AGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp AGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTGGTCCTGAGCGAGACTaGGCAACACTGGCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RDHMGAGVCHGKATSLRGGPERD*ATLAGE
Trigger: CTCTCCCGCCAGTGTTGCTCAGTCTCGCTCAGGACC...ACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp GACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCATGGAACTGCTGGTTaGCTGGGGAGTCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: DHMGAGVCHGKATSLRGWHGTAG*LGSLGP
Trigger: GGGCCCCAGACTCCCCAGTCAACCAGCAGTTCCATG...CCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp TCTAGGAAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGGTGGGCAGGGTGCGTaGGGCCGGGAAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRKPRRLPILPFCTAMARGGQGA*GREGSS
Trigger: GCTGCTGCCTTCCCGGCCTCACGCACCCTGCCCACC...TCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCCTAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp GACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGGTCATCGGGTACCGCTaGGGGGTCTGGGACCCGTAT +
Preference number: 4 (lower is better)
Translates to: DHMGAGVCHGKATSLRGWVIGYR*GVWDPY
Trigger: ATACGGGTCCCAGACCCCGCAGCGGTACCCGATGAC...CCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp ATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTTGCTGTGTCGTCGACTaGTGGGAGGGGTATGGAGCC +
Preference number: 4 (lower is better)
Translates to: MGAGVCHGKATSLRGWPSCCVVD*WEGYGA
Trigger: GGCTCCATACCCCTCCCAGCAGTCGACGACACAGCA...AGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp CCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCGGAGTCTGGGGCCCCTaGATAGATCCTGATCCCGCA +
Preference number: 4 (lower is better)
Translates to: PYGGWRVPWEGHEPSWLAGVWGP*IDPDPA
Trigger: TGCGGGATCAGGATCTATGCAGGGGCCCCAGACTCC...GGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp TGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCAGGCTGGGCAGCTTGTTaGTGGCTGGCAGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CHGKATSLRGWPSDLCAAGWAAC*WLAGWG
Trigger: GCCCCAGCCTGCCAGCCAGCAACAAGCTGCCCAGCC...TGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGTTCTGGGGGCCGCCTaGTGGTCGGCGCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VCHGKATSLRGWPSDLCAVLGAA*WSALSS
Trigger: GCTACTGAGCGCCGACCAGCAGGCGGCCCCCAGAAC...TGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp TGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGGTTGCAATGGCACGAGCTaGCAGGCTGTCCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: CPSALQWHELPGCPPEPGCNGTS*QAVPLS
Trigger: GCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCA...ACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp ACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGTGCAATGGCACGAGCTaGCAGGCTGTCCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TALLHCNGTSCQAVPLSQCNGTS*QAVPLS
Trigger: GCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCA...CTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp ACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGAGGCTGGCCTGGCTCTaGTGGAACTGTGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: TALLHCNGTSCQAVPLSQRLAWL*WNCVAA
Trigger: TGCCGCCACACAGTTCCAGCAGAGCCAGGCCAGCCT...CTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp ACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCTGTGTCGTCGACTGCTaGGAGGGGTATGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: TIWGLACAMGRPRAFVVGCVVDC*EGYGAG
Trigger: CCCGGCTCCATACCCCTCCCAGCAGTCGACGACACA...GCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGTGTCCGACTGGCCACTaGGTGGCCGAGGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: GPYGGWRVPWEGHEPSWLCPTGH*VAEVAS
Trigger: AGATGCCACCTCGGCCACCCAGTGGCCAGTCGGACA...CAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCGACCTCCGGCACCCATaGGGTTTATGCCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLACAMGRPRAFVVGPLIDLRHP*GLCLQP
Trigger: TGGCTGGAGGCATAAACCCCATGGGTGCCGGAGGTC...GATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGTGGGCAGCTTGTTGCTaGCTGGCAGGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ACAMGRPRAFVVGPLICVWAACC*LAGWGW
Trigger: CCAGCCCCAGCCTGCCAGCCAGCAACAAGCTGCCCA...CACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AGAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGGACCATATGGGGGCTaGCGTGTGCCATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RGTIWGLACAMGRPRAFVGPYGG*RVPWEG
Trigger: GCCTTCCCATGGCACACGCCAGCCCCCATATGGTCC...CACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615191.4
3UTR CAA 72 bp TCGTACAGAGTAAACTCTGAGTGGTTCTCGTCCACCTaGGCCAAGGCAAGCAGCGCGCGGGCAGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SYRVNSEWFSST*AKASSARAARR
Trigger: GCGGCGGGCTGCCCGCGCGCTGCTTGCCTTGGCCAAGGTGGACGAGAACCACTCAGAGTTTACTCTGTACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp TGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCAGGAGTCTGGCCCTGTTaGCCATACCCGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: CHGKATSLRGWPSDLCAAGVWPC*PYPLGP
Trigger: AGGCCCCAGCGGGTATGGTCAACAGGGCCAGACTCC...TGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp GGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTTACGAAGGTTGGGCATaGGGGGTCTGGGACGGTGGT +
Preference number: 4 (lower is better)
Translates to: GTIWGLACAMGRPRAFVVYEGWA*GVWDGG
Trigger: ACCACCGTCCCAGACCCCTCATGCCCAACCTTCGTA...AACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp ATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTTGTCCTCCGGAAGGCTaGCGCGGAGATAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: IWGLACAMGRPRAFVVGPCPPEG*RGDKAE
Trigger: CTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACA...AGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp CCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCGAATATGGGGGTCCCTaGGGGTTGATCATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PYGGWRVPWEGHEPSWLAEYGGP*GLIMPA
Trigger: GGCTGGCATGATCAACCCTCAGGGACCCCCATATTC...GGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp GCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGGTTGGGGCCCTGCCCTaGGGACATGAAGGGATCACT +
Preference number: 4 (lower is better)
Translates to: AGVCHGKATSLRGWPSDLVGALP*GHEGIT
Trigger: AGTGATCCCTTCATGTCCTCAGGGCAGGGCCCCAAC...CAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp ACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGGTCCTGGGCTTCAGCTaGAGGGCAAACTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: TALLHCNGTSCQAVPLSQVLGFS*RANCPV
Trigger: CACTGGGCAGTTTGCCCTTCAGCTGAAGCCCAGGAC...CTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp TGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGGTGTCCTGGGCTTCAGCTaGAGGGCAAACTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CPSALQWHELPGCPPEPGVLGFS*RANCPV
Trigger: CACTGGGCAGTTTGCCCTTCAGCTGAAGCCCAGGAC...ACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp GGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTTACCCATGTCCTTGCTaGGGTCCTGACGGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GTIWGLACAMGRPRAFVVYPCPC*GPDGGP
Trigger: GGGACCTCCGTCAGGACCGCAGCAAGGACATGGGTA...AACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGGGGTACCCATGTCCTTaGTGCGGTCCTGACGGAGGT +
Preference number: 4 (lower is better)
Translates to: DHMGAGVCHGKATSLRGWGYPCP*CGPDGG
Trigger: ACCTCCGTCAGGACCGCAGCAAGGACATGGGTACCC...CCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGGACCCGTATGGCTaGCCTGGGTACCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: RDHMGAGVCHGKATSLRGWDPYG*PGYPCP
Trigger: AGGACATGGGTACCCAGGGCAGCCATACGGGTCCCA...ACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp TGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGGGCTGGCTCTGGGGGTaGTGCTGTGTCGTCGACTGC +
Preference number: 4 (lower is better)
Translates to: CAMGRPRAFVVGPLICVQGWLWG*CCVVDC
Trigger: GCAGTCGACGACACAGCAGCACCCCCAGAGCCAGCC...CTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGGAGAGCGTCGAGGGTaGTGGCTGCTGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GVCHGKATSLRGWPSDLCGERRG*WLLRLL
Trigger: CAGCAACCTCAGCAGCCAGCACCCTCGACGCTCTCC...ACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp CATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCCCTGGAGGGAGTGTaGCATAAGGTGGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: HMGAGVCHGKATSLRGWPSLEGV*HKVGCQ
Trigger: CTGGCATCCCACCTTATGGCACACTCCCTCCAGGGA...GGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp CTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTATTGGTGCCAGGGGGTaGAGAGACACGGTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LACAMGRPRAFVVGPLICIGARG*RDTVSA
Trigger: GGCCGAGACCGTGTCTCTGCACCCCCTGGCACCAAT...ACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCCCGTATGGCTGCCCTaGGTACCCATGTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: IWGLACAMGRPRAFVVGPPVWLP*VPMSLL
Trigger: CAGCAAGGACATGGGTACCCAGGGCAGCCATACGGG...AGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTTGGCATCTGGTTGCCTaGCACTGCAGCAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: GTIWGLACAMGRPRAFVVWHLVA*HCSRRE
Trigger: CTCTCGCCTGCTGCAGTGCCAGGCAACCAGATGCCA...AACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCCAGCCATGCCTGCACTaGGGTAGTTGGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: HMGAGVCHGKATSLRGWPQPCLH*GSWHWA
Trigger: TGCCCAATGCCAACTACCCCAGTGCAGGCATGGCTG...GGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp TGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGCCCCTTGATTCATATTaGGGTAGCCTGGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: WGLACAMGRPRAFVVGPLPLDSY*GSLAAC
Trigger: ACAGGCCGCCAGGCTACCCCAATATGAATCAAGGGG...CAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTGCAGGAGAGGGAGGCTaGATCTTGGGCTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: RDHMGAGVCHGKATSLRGAGEGG*ILGWDF
Trigger: GAAGTCCCAGCCCAAGATCCAGCCTCCCTCTCCTGC...ACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCCTGGGGGCCGCCTGCTaGTCGGCGCTCAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: MGRPRAFVVGPLICVQHFLGAAC*SALSSS
Trigger: GCTGCTACTGAGCGCCGACCAGCAGGCGGCCCCCAG...GAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGAATGGAAATTGGTTCTaGGGGCCGCCTGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: EGPYGGWRVPWEGHEPSWNGNWF*GPPAGR
Trigger: CCGACCAGCAGGCGGCCCCCAGAACCAATTTCCATT...CCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp TGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGACGAGCCTTCGTGGTTaGCCCTCTGATCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: WGLACAMGRPRAFVVGPLTSLRG*PSDLCA
Trigger: TGCACACAGATCAGAGGGCCAACCACGAAGGCTCGT...CAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATGGCTGGCGTGTGCCATaGGAAGGCCACGAGCCTTCG +
Preference number: 4 (lower is better)
Translates to: AMGRPRAFVVGPLICVQHGWRVP*EGHEPS
Trigger: CGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCC...ATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CGGGCAGCCCGCCGCATCATGTCCACACTAGTTGGCTCAAAGGGTGGGTTCTGCTATCCCGCCGAATCATaGGGGGCTGCACAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RAARRIMSTLVGSKGGFCYPAES*GAAQGQ
Trigger: CTGCCCCTGTGCAGCCCCCCATGATTCGGCGGGATA...GCAGAACCCACCCTTTGAGCCAACTAGTGTGGACATGATGCGGCGGGCTGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR CCA 90 bp TGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGGTGCATGTGGAGGAGGCTaGCCTGGCTCTGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: CPSALQWHELPGCPPEPGACGGG*PGSAGT
Trigger: AGTTCCAGCAGAGCCAGGCCAGCCTCCTCCACATGC...ACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp GGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGTCCCGCCATATGGCTaGGGTCTCATCTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: GPYGGWRVPWEGHEPSWLVPPYG*GLILPI
Trigger: GATGGGCAAGATGAGACCTCAGCCATATGGCGGGAC...CAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp GGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGTGGGAGTATGGAGGCTaGGAGGACTGGAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: GPYGGWRVPWEGHEPSWLWEYGG*EDWSCG
Trigger: ACCACAGCTCCAGTCCTCTCAGCCTCCATACTCCCA...CAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp GGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTCATGGAAGGATGCATaGTGCTGTCCGACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLACAMGRPRAFVVGPLISWKDA*CCPTGH
Trigger: GTGGCCAGTCGGACAGCATCATGCATCCTTCCATGA...GATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp TGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCTGAGCAACCTCAGCTaGTGCCTGTATGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: CAMGRPRAFVVGPLICVQLSNLS*CLYGAA
Trigger: GGCGGCCCCATACAGGCATCAGCTGAGGTTGCTCAG...CTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp GGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCAGAAAGGCGTGAGGTaGTGGAGGGAGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGCRYCPSALQWHELPGCQKGVR*WREGRW
Trigger: CCACCTCCCCTCCCTCCATCACCTCACGCCTTTCTG...ACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp TGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCTGGTTGCCTGGCACTaGAGCAGGCGAGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: CAMGRPRAFVVGPLICVQLVAWH*SRREWS
Trigger: GGACCACTCTCGCCTGCTGCAGTGCCAGGCAACCAG...CTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCTGCCCCTGCCCAGTaGTGTATGGCACGCTGTACA +
Preference number: 4 (lower is better)
Translates to: GVCHGKATSLRGWPSDLCAAPAQ*CMARCT
Trigger: TGTACAGCGTGCCATACAGCACTGGGCAGGGGCAGC...ACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTGTGGTGGCATGTTTTaGTGGGCATTGGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EGPYGGWRVPWEGHEPSWCGGMF*WALVPG
Trigger: CCCTGGCACCAATGCCCAGCAAAACATGCCACCACA...CCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp ACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGTCTGCTGTTGTCACATaGTTCCGAGGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TALLHCNGTSCQAVPLSQSAVVT*FRGAGG
Trigger: CCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGA...CTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp TGTCCCCCTGAGCCAGGTTGGCCAGCAGTACCACAGCCATCTCCCGGCACACCGGGAGGTTGCCGATACTaGCCTTCTGCACTGCAATGG +
Preference number: 4 (lower is better)
Translates to: CPPEPGWPAVPQPSPGTPGGCRY*PSALQW
Trigger: CCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCC...CGGTGTGCCGGGAGATGGCTGTGGTACTGCTGGCCAACCTGGCTCAGGGGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCACGGGGACTGCTGATGTaGAGGCTGGGATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CHGKATSLRGWPSDLCAARGLLM*RLGWLL
Trigger: CAGCAGCCATCCCAGCCTCCACATCAGCAGTCCCCG...TGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATGAGCGTCGAGGGTGCTaGCTGCTGAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AMGRPRAFVVGPLICVQHERRGC*LLRLLL
Trigger: CAGCAGCAACCTCAGCAGCCAGCACCCTCGACGCTC...ATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp TGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCAGGATACGCAGCCTGCTaGGAGAGCGTCGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: CHGKATSLRGWPSDLCAAGYAAC*ESVEGA
Trigger: AGCACCCTCGACGCTCTCCCAGCAGGCTGCGTATCC...TGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AGAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGCTTGCCCTCCCTTACTaGAGGTCATTGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGTIWGLACAMGRPRAFVLALPY*RSLRGL
Trigger: CAGCCCCCTCAATGACCTCCAGTAAGGGAGGGCAAG...CACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCACGACTGGCCACTGGGTaGCCGAGGTGGCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: VCHGKATSLRGWPSDLCARLATG*PRWHLV
Trigger: AACCAGATGCCACCTCGGCCACCCAGTGGCCAGTCG...TGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCGTGACTCATCCTCCCTaGAGGGAGTGTGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: HMGAGVCHGKATSLRGWPVTHPP*RECAIR
Trigger: CCTTATGGCACACTCCCTCCAGGGAGGATGAGTCAC...GGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATGAACTGCTGGTTGACTaGGGAGTCTGGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: AMGRPRAFVVGPLICVQHELLVD*GVWGPC
Trigger: GCAGGGGCCCCAGACTCCCCAGTCAACCAGCAGTTC...ATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGGCTCATGCCTGGCAATaGGGGGATCTGACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: DHMGAGVCHGKATSLRGWAHAWQ*GDLTVW
Trigger: CCACACAGTCAGATCCCCCCATTGCCAGGCATGAGC...CCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCGAAGGGATCACTCCCTaGAGCTTTCCTCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: HMGAGVCHGKATSLRGWPEGITP*SFPHAA
Trigger: GGCAGCATGAGGAAAGCTCCAGGGAGTGATCCCTTC...GGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCGGGATAGTGCTGTCGTaGTCCCATCGCCACATTTCC +
Preference number: 4 (lower is better)
Translates to: HMGAGVCHGKATSLRGWPGIVLS*SHRHIS
Trigger: GGAAATGTGGCGATGGGACCACGACAGCACTATCCC...GGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTACATTGTAGTCTGCTaGCTGGGGAAGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GLACAMGRPRAFVVGPLIYIVVC*LGKGLP
Trigger: TGGCAGCCCCTTCCCCAGCCAGCAGACTACAATGTA...GATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCTGGAGGTCCATCAGGTaGGGGCCCCTCCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: KPRRLPILPFCTAMARAAWRSIR*GPLLVC
Trigger: ACAGACCAGGAGGGGCCCCCACCTGATGGACCTCCA...GGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp GGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGTTCATGCCCCCTGGTaGGGACACATCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: GVCHGKATSLRGWPSDLCVHAPW*GHIPDP
Trigger: TGGGTCAGGGATGTGTCCCCACCAGGGGGCATGAAC...ACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp ATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTCAAGCTGGAGGGTCTTaGCTGAAGGCTCAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: MGAGVCHGKATSLRGWPSQAGGS*LKAQVH
Trigger: ATGAACCTGAGCCTTCAGTCAAGACCCTCCAGCTTG...AGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp AGAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGCTGCTGGAAATCCCTaGTGTGCTCACTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: RGTIWGLACAMGRPRAFVAAGNP*CAHSRT
Trigger: AGTCCTGGAGTGAGCACATCAGGGATTTCCAGCAGC...CACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTGACGGAGGTCCCTGTTaGTGCGAGTATGGGTTAGTC +
Preference number: 4 (lower is better)
Translates to: RDHMGAGVCHGKATSLRGDGGPC*CEYGLV
Trigger: GACTAACCCATACTCGCAGCAACAGGGACCTCCGTC...ACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AGAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGCTGGTAGGAGCCCATaGCTGTGTGTATCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RGTIWGLACAMGRPRAFVAGRSP*LCVSVL
Trigger: GAGGACAGATACACACAGGCATGGGCTCCTACCAGC...CACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp TGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGGAGTTGGCAGCAACATaGATGGCGACAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: WGLACAMGRPRAFVVGPLELAAT*MATAVS
Trigger: AGAAACTGCTGTCGCCATGCATGTTGCTGCCAACTC...CAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCGGATCCCAACTGAATTaGTCCTGCTCATGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GLACAMGRPRAFVVGPLIGSQLN*SCSCLA
Trigger: TGCCAGGCATGAGCAGGAGCAATTCAGTTGGGATCC...GATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTCAGGAGGGCCATATGTaGCATCCATTGGCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: GTIWGLACAMGRPRAFVVQEGHM*HPLAAC
Trigger: ACAAGCGGCCAATGGATGGCACATATGGCCCTCCTG...AACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTAGGCTGGGCAGCTTGTTaGTGGCTGGCAGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVGWAAC*WLAGWG
Trigger: GCCCCAGCCTGCCAGCCAGCAACAAGCTGCCCAGCC...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp CTGGCCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCCCCTGGTGTACCCTCTaGTGTTGTCACATGCTTCCG +
Preference number: 4 (lower is better)
Translates to: LAWLCWNCVAARLSSRKPPWCTL*CCHMLP
Trigger: CGGAAGCATGTGACAACAGCAGAGGGTACACCAGGG...GGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp TGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGGTTGCTTCCGTTCTGGGTaGTTGTGGTGCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: CPSALQWHELPGCPPEPGCFRSG*LWCSRI
Trigger: GATCCTGCTGCACCACAAGCACCCAGAACGGAAGCA...ACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp TGTCCCCCTGAGCCAGGTTGGCCAGCAGTACCACAGCCATCTCCCGGCACACCGGGACAGGCAGGCAAATaGTCTCGGGGTATGGAGATA +
Preference number: 4 (lower is better)
Translates to: CPPEPGWPAVPQPSPGTPGQAGK*SRGMEI
Trigger: TATCTCCATACCCCGAGAGCATTTGCCTGCCTGTCC...CGGTGTGCCGGGAGATGGCTGTGGTACTGCTGGCCAACCTGGCTCAGGGGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp TTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCCATCATTACCCGCCATaGCTCCGGGGTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPILPFCTAMARAARLSPHHYPP*LRGSCC
Trigger: ACAGCAGGAACCCCGGAGGCATGGCGGGTAATGATG...GGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466382.2
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTCCGCTCCCCAGGGCCTaGCCCCGCTGTGACTCTCCG +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSPLPRA*PRCDSP
Trigger: CGGAGAGTCACAGCGGGGCCAGGCCCTGGGGAGCGG...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp CATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTTACCGCTGCGGGGTCTaGGACCCGTATGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: HGKATSLRGWPSDLCAAFYRCGV*DPYGCP
Trigger: AGGGCAGCCATACGGGTCCCAGACCCCGCAGCGGTA...AAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCAAGAGAGGCCGCCCATaGCACTCTGCGCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ATSLRGWPSDLCAAFHLFKRGRP*HSAPGP
Trigger: AGGGCCGGGCGCAGAGTGCCATGGGCGGCCTCTCTT...GAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp TATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCGTTGACCATACCCGCTaGGGCCTTGTTGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: YGGWRVPWEGHEPSWLALVDHTR*GLVVHK
Trigger: CTTATGGACAACAAGGCCCCAGCGGGTATGGTCAAC...GAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGAGAGGACTGGAGCTGTaGTGGTTGAGACTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPYGGWRVPWEGHEPSWLRGLEL*WLRLWL
Trigger: CAGCCACAGTCTCAACCACCACAGCTCCAGTCCTCT...CAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCGCTCTCCTTGGCTGCTaGAAATCCCTGATGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GLACAMGRPRAFVVGPLIALLGC*KSLMCS
Trigger: TGAGCACATCAGGGATTTCCAGCAGCCAAGGAGAGC...GATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCGACCATAGCTCCCCATaGAGTTCTGCTGGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: TIWGLACAMGRPRAFVVGDHSSP*SSAGRS
Trigger: GCTCCTACCAGCAGAACTCCATGGGGAGCTATGGTC...GCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGCCATGGTTCCACCCATaGAATATGGGGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GPYGGWRVPWEGHEPSWLPWFHP*NMGVPE
Trigger: CTCAGGGACCCCCATATTCCATGGGTGGAACCATGG...CAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCTCCCTGCAGAATTGTTaGCCATGGTTCCACCCATGG +
Preference number: 4 (lower is better)
Translates to: PYGGWRVPWEGHEPSWLASLQNC*PWFHPW
Trigger: CCATGGGTGGAACCATGGCCAACAATTCTGCAGGGA...GGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGCATGAGATTCGGCTGTaGGGCCCCAGTGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: TALLHCNGTSCQAVPLSQHEIRL*GPSAHV
Trigger: AACATGAGCACTGGGGCCCCACAGCCGAATCTCATG...CTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466382.2
CDS-3UTR CCA 90 bp GCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGCATGAGATTCGGCTGTaGGGCCCCAGTGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: AGVCHGKATSLRGWPSDLHEIRL*GPSAHV
Trigger: AACATGAGCACTGGGGCCCCACAGCCGAATCTCATG...CAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGTACATTGTAGTCTGCTaGCTGGGGAAGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TALLHCNGTSCQAVPLSQYIVVC*LGKGLP
Trigger: TGGCAGCCCCTTCCCCAGCCAGCAGACTACAATGTA...CTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466382.2
CDS-3UTR CCA 90 bp TCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGGGGCTGGTGGGCAGGGGGCTGGTAGTTAGATaGAGGGGGCCTTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: SLVYPLLLSHASEGLVGRGLVVR*RGPCHG
Trigger: CCCATGACAAGGCCCCCTCCATCTAACTACCAGCCC...CCTGCCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR CCA 90 bp AGGGTTTCCAAGACCAGTCTCTGCGGGGAAAGGACGGCATTGGGGCCCAGGGTGCCTTCTGCACTGCAATaGCACGAGCTGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RVSKTSLCGERTALGPRVPSALQ*HELPGC
Trigger: ACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGG...CACCCTGGGCCCCAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGAAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CAA 72 bp CTGGAGGTCCATCAGGTGGGGGCCCCTCCTGGTCTGTaGTCCCTGGTGTACCCTCTGCTGTTGTCACATGCT +
Preference number: 4 (lower is better)
Translates to: LEVHQVGAPPGL*SLVYPLLLSHA
Trigger: AGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGAGGGGCCCCCACCTGATGGACCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCCAAGGCGGCCGCGGCTaGGTGAGGAGGCGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCQGGRG*VRRRPH
Trigger: GTGGGGGCGCCTCCTCACTCAGCCGCGGCCGCCTTG...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR TCA 90 bp ACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGGTGGAGCCGGGGACTGCTaGTGTGGAGGCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: TSLRGWPSDLCAAFHLFGGAGDC*CGGWDG
Trigger: GCCATCCCAGCCTCCACATCAGCAGTCCCCGGCTCC...ACCGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp GGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCGACCCAAATGAATCTTaGGATAGCTCCTGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: GLACAMGRPRAFVVGPLIDPNES*DSSCGG
Trigger: TCCACCGCAGGAGCTATCTCAAGATTCATTTGGGTC...GATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp ATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTCTGGAGGGTCTTGACTaGAGGCTCAGGTTCATATCT +
Preference number: 4 (lower is better)
Translates to: MGAGVCHGKATSLRGWPSLEGLD*RLRFIS
Trigger: AGATATGAACCTGAGCCTTCAGTCAAGACCCTCCAG...AGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp GGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTTGGCCTTCTCCTCAGTaGAGGCCAGATAACGGTCCA +
Preference number: 4 (lower is better)
Translates to: GVCHGKATSLRGWPSDLCWPSPQ*RPDNGP
Trigger: TGGACCGTTATCTGGCCTTCACTGAGGAGAAGGCCA...ACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp TGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCACACATGGTGCCTTGCTaGGCAACCTCAGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: CHGKATSLRGWPSDLCAAHMVPC*ATSADA
Trigger: GGCATCAGCTGAGGTTGCTCAGCAAGGCACCATGTG...TGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp AAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCCCAGGAGACCAGACTTaGGGGACATCATTACCCGCC +
Preference number: 4 (lower is better)
Translates to: KPRRLPILPFCTAMARAAPGDQT*GTSLPA
Trigger: GGCGGGTAATGATGTCCCTCAAGTCTGGTCTCCTGG...GGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp TGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCAGCCTCCAGCCATGCCTaGACTGGGGTAGTTGGCATT +
Preference number: 4 (lower is better)
Translates to: CHGKATSLRGWPSDLCAAASSHA*TGVVGI
Trigger: AATGCCAACTACCCCAGTGCAGGCATGGCTGGAGGC...TGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATCACCCATGGGGTTTATaGCTCCAGCCATGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: AMGRPRAFVVGPLICVQHHPWGL*LQPCLH
Trigger: GTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG...ATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp ACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCATCTCTGGGCTGGCTaGCATCCCTGCAGAATTGTT +
Preference number: 4 (lower is better)
Translates to: TIWGLACAMGRPRAFVVGHLWAG*HPCRIV
Trigger: AACAATTCTGCAGGGATGGCAGCCAGCCCAGAGATG...GCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCCCGCCGTTGGGGCCCTaGCCTGAGGACATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ATSLRGWPSDLCAAFHLFPPLGP*PEDMKG
Trigger: TCCCTTCATGTCCTCAGGGCAGGGCCCCAACGGCGG...GAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTATGGGGGCTGGCGTGTaGCATGGGAAGGCCACGAGC +
Preference number: 4 (lower is better)
Translates to: RPRAFVVGPLICVQHFICMGAGV*HGKATS
Trigger: GCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCAT...ACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp CCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCAGGACATCATTACCCGCCATaGCTCCGGGGTTCCAATGTC +
Preference number: 4 (lower is better)
Translates to: PGSAGTVWRQGCPLGSPGHHYPP*LRGSNV
Trigger: GACATTGGAACCCCGGAGGCATGGCGGGTAATGATG...TCCTGGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR GCA 90 bp TGTCCCCCTGAGCCAGGTTGGCCAGCAGTACCACAGCCATCTCCCGGCACACCGCCACTGTCAAACTCCTaGACACGCCCAAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: CPPEPGWPAVPQPSPGTPPLSNS*TRPSLS
Trigger: AGATAAGCTTGGGCGTGTGCAGGAGTTTGACAGTGG...CGGTGTGCCGGGAGATGGCTGTGGTACTGCTGGCCAACCTGGCTCAGGGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp CCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCAGGAGCAGCAGCTCTGTCTTaGTCTCGAAGTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PGSAGTVWRQGCPLGSPGAAALS*SRSGSG
Trigger: TCCAGACCCACTTCGAGAGCAAGACAGAGCTGCTGC...TCCTGGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp CGGGCAGCCCGCCGCATCATGTCCACACTAGTTGGCTCAAAGGGTGGGTTCTGCGCAGCAGCTCTGTCTTaGTCTCGAAGTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RAARRIMSTLVGSKGGFCAAALS*SRSGSG
Trigger: TCCAGACCCACTTCGAGAGCAAGACAGAGCTGCTGC...GCAGAACCCACCCTTTGAGCCAACTAGTGTGGACATGATGCGGCGGGCTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp CTGAGGGTTTCCAAGACCAGTCTCTGCGGGGAAAGGACGGCATTGGGGCCCAGGCCCTGGTGTACCCTCTaGTGTTGTCACATGCTTCCG +
Preference number: 4 (lower is better)
Translates to: LRVSKTSLCGERTALGPRPWCTL*CCHMLP
Trigger: CGGAAGCATGTGACAACAGCAGAGGGTACACCAGGG...CCTGGGCCCCAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGAAACCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp CCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCAGGACCGATACTGCCCTTCTaGACTGCAATGGCACGAGCT +
Preference number: 4 (lower is better)
Translates to: PGSAGTVWRQGCPLGSPGPILPF*TAMARA
Trigger: AGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGG...TCCTGGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp AGAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGCTGTTGCTGCGAGTATaGGTTAGTCCCGCCATATGG +
Preference number: 4 (lower is better)
Translates to: RGTIWGLACAMGRPRAFVLLLRV*VSPAIW
Trigger: CCATATGGCGGGACTAACCCATACTCGCAGCAACAG...CACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTGCGCCCGGCCCTGCATaGTCATCGGGTACCGCTGCG +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSAPGPA*SSGTAA
Trigger: CGCAGCGGTACCCGATGACCATGCAGGGCCGGGCGC...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp ATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTTGGTGGTTGAGACTGTaGCTGCTGCTGATACGAAGG +
Preference number: 4 (lower is better)
Translates to: IWGLACAMGRPRAFVVGPWWLRL*LLLIRR
Trigger: CCTTCGTATCAGCAGCAGCCACAGTCTCAACCACCA...AGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp TGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGTTACTCTGCTCTCCTTaGCTGCTGGAAATCCCTGAT +
Preference number: 4 (lower is better)
Translates to: WGLACAMGRPRAFVVGPLLLCSP*LLEIPD
Trigger: ATCAGGGATTTCCAGCAGCCAAGGAGAGCAGAGTAA...CAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGTATAGTTTGGCTGCCTaGGGTAGCCACCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: ACAMGRPRAFVVGPLICVYSLAA*GSHLVG
Trigger: GCCCACAAGGTGGCTACCCCAGGCAGCCAAACTATA...CACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGAGTGTGCCATAAGGTaGGATGCCAGGCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: LACAMGRPRAFVVGPLICECAIR*DARLSM
Trigger: CATGGACAGCCTGGCATCCCACCTTATGGCACACTC...ACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AGAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGTGGCAGCAACATGCATaGCGACAGCAGTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RGTIWGLACAMGRPRAFVWQQHA*RQQFLG
Trigger: CCCAAGAAACTGCTGTCGCCATGCATGTTGCTGCCA...CACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGGGCTGGATCTTGGGCTaGGACTTCTTGGAATCAGCA +
Preference number: 4 (lower is better)
Translates to: AGVCHGKATSLRGWPSDLGWILG*DFLESA
Trigger: TGCTGATTCCAAGAAGTCCCAGCCCAAGATCCAGCC...CAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CGGGCAGCCCGCCGCATCATGTCCACACTAGTTGGCTCAAAGGGTGGGTTCTGCGAAGGGATCACTCCCTaGAGCTTTCCTCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: RAARRIMSTLVGSKGGFCEGITP*SFPHAA
Trigger: GGCAGCATGAGGAAAGCTCCAGGGAGTGATCCCTTC...GCAGAACCCACCCTTTGAGCCAACTAGTGTGGACATGATGCGGCGGGCTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466382.2
CDS-3UTR CCA 90 bp CGGGCAGCCCGCCGCATCATGTCCACACTAGTTGGCTCAAAGGGTGGGTTCTGCGGGATAGTGCTGTCGTaGTCCCATCGCCACATTTCC +
Preference number: 4 (lower is better)
Translates to: RAARRIMSTLVGSKGGFCGIVLS*SHRHIS
Trigger: GGAAATGTGGCGATGGGACCACGACAGCACTATCCC...GCAGAACCCACCCTTTGAGCCAACTAGTGTGGACATGATGCGGCGGGCTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466382.2
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTCTGGCAGGCTGGGGCTaGGCTGGGGGCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSLAGWG*AGGNCC
Trigger: GCAGCAGTTGCCCCCAGCCCAGCCCCAGCCTGCCAG...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGGTACCCTCCATGGGAGCTaGACTAGACACCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: CPSALQWHELPGCPPEPGTLHGS*TRHLAE
Trigger: TTCAGCAAGGTGTCTAGTCCAGCTCCCATGGAGGGT...ACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp ACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGCCGGTGGCTCTGTGCTaGGCTAATGCCAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: TALLHCNGTSCQAVPLSQPVALC*ANAKWK
Trigger: TTTCCATTTGGCATTAGCCCAGCACAGAGCCACCGG...CTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TGTCCCCCTGAGCCAGGTTGGCCAGCAGTACCACAGCCATCTCCCGGCACACCGCATGTCCACACTAGTTaGCTCAAAGGGTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: CPPEPGWPAVPQPSPGTPHVHTS*LKGWVL
Trigger: CAGAACCCACCCTTTGAGCCAACTAGTGTGGACATG...CGGTGTGCCGGGAGATGGCTGTGGTACTGCTGGCCAACCTGGCTCAGGGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp ACAGGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGGGTTCTCGTCCACCTTaGCCAAGGCAAGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: TGRQMLSGYGDRSNCPEMGSRPP*PRQAAR
Trigger: GCGCGCTGCTTGCCTTGGCCAAGGTGGACGAGAACC...CATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TGGAGGAGGCTGGCCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTTCCCAAGGGAGAAGCTaGACAGCACAGGGTAAACTG +
Preference number: 4 (lower is better)
Translates to: WRRLAWLCWNCVAARLSSSQGRS*TAQGKL
Trigger: CAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA...AGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAGCCTCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
3UTR CAA 72 bp TTCCGTTCTGGGTGCTTGTGGTGCAGCAGGATCAGCTaGCCCAGGATGAGCAGCAGCCCTGGGTGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: FRSGCLWCSRIS*PRMSSSPGCLD
Trigger: GTCCAAACACCCAGGGCTGCTGCTCATCCTGGGCAAGCTGATCCTGCTGCACCACAAGCACCCAGAACGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGGAGCCGGGGACTGCTaGTGTGGAGGCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLGAGDC*CGGWDG
Trigger: GCCATCCCAGCCTCCACATCAGCAGTCCCCGGCTCC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp ACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCGGAGAGAAAGGAGACTaGGCTGGATTACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TIWGLACAMGRPRAFVVGGEKGD*AGLLCS
Trigger: AGAGCAGAGTAATCCAGCTCAGTCTCCTTTCTCTCC...GCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp GCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGGCTGTCCATGCATTTaGCCTCCGGCACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: ATSLRGWPSDLCAAFHLFGCPCI*PPAPMG
Trigger: CCCCATGGGTGCCGGAGGTCAAATGCATGGACAGCC...GAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp CCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGTTGCCCATGGAGGCGTaGCTCATCCTCCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PRAFVVGPLICVQHFICSLPMEA*LILPGG
Trigger: CCCTCCAGGGAGGATGAGTCACGCCTCCATGGGCAA...CGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp AGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTTGATGTGCCCACATTaGGGTTGGTTGCAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: RDHMGAGVCHGKATSLRGLMCPH*GWLQVP
Trigger: GGGAACTTGCAACCAACCTCAATGTGGGCACATCAA...ACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp CCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGCCCCTGCATAGATCCTaGTCCCGCAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PRAFVVGPLICVQHFICSPLHRS*SRRRGR
Trigger: CCTCCCTCTCCTGCGGGATCAGGATCTATGCAGGGG...CGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp AAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGCTGGGTTGGAAGGCATaGGATTCGGCTGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KATSLRGWPSDLCAAFHLLGWKA*DSAVGP
Trigger: GGGCCCCACAGCCGAATCTCATGCCTTCCAACCCAG...CAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp CGGGCAGCCCGCCGCATCATGTCCACACTAGTTGGCTCAAAGGGTGGGTTCTGCCTCCTCACTATTCTCTaGAGCTGGCTTGTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: RAARRIMSTLVGSKGGFCLLTIL*SWLVLA
Trigger: GGCAAGGACAAGCCAGCTTCAGAGAATAGTGAGGAG...GCAGAACCCACCCTTTGAGCCAACTAGTGTGGACATGATGCGGCGGGCTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp CTGAGGGTTTCCAAGACCAGTCTCTGCGGGGAAAGGACGGCATTGGGGCCCAGGACGCCCAAGCTTATCTaGGCAGTCCACCACAAATGG +
Preference number: 4 (lower is better)
Translates to: LRVSKTSLCGERTALGPRTPKLI*AVHHKW
Trigger: CCATTTGTGGTGGACTGCTCAGATAAGCTTGGGCGT...CCTGGGCCCCAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGAAACCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp GGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGTCAGCTTGCCCAGGATaGGCAGCAGCCCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: GRQMLSGYGDRSNCPEMLSACPG*AAALGV
Trigger: AACACCCAGGGCTGCTGCTCATCCTGGGCAAGCTGA...CAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp TGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCAATCCCTGACCCAACCTaGGGTGGCATTGGCCATGTT +
Preference number: 4 (lower is better)
Translates to: CHGKATSLRGWPSDLCAAIPDPT*GGIGHV
Trigger: AACATGGCCAATGCCACCTCAGGTTGGGTCAGGGAT...TGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCCGCCGGAGCCCGGAGTaGCACCTCTCGGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIRRSPE*HLSGSS
Trigger: TGAGCTCCCCGAGAGGTGGCACTCCGGGCTCCGGCG...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR GCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTATGGCTCTGGGGGTGCTaGTGTGTCGTCGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVWLWGC*CVVDCW
Trigger: CCAGCAGTCGACGACACAGCAGCACCCCCAGAGCCA...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp GAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGAGGTTCATATCTTCTTaGCCTCCCTTACTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: EGPYGGWRVPWEGHEPSWRFISS*PPLLEV
Trigger: GACCTCCAGTAAGGGAGGGCAAGAAGATATGAACCT...CCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp ATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTTGGAAATCCCTGATGTaGTCACTCCAGGACTCAGAG +
Preference number: 4 (lower is better)
Translates to: IWGLACAMGRPRAFVVGPWKSLM*SLQDSE
Trigger: CTCTGAGTCCTGGAGTGAGCACATCAGGGATTTCCA...AGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCATTATGCCTCCAGCCATaGCTGCACTGGGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: VCHGKATSLRGWPSDLCALCLQP*LHWGSW
Trigger: CCAACTACCCCAGTGCAGGCATGGCTGGAGGCATAA...TGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp ATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCGGCCATAAGGCCGGTTaGCCATGGAGGCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: MGRPRAFVVGPLICVQHFGHKAG*PWRRDS
Trigger: TGAGTCACGCCTCCATGGGCAACCGGCCTTATGGCC...GAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp CTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTCTTCTGCCATGGAACTaGTGGTTGACTGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LACAMGRPRAFVVGPLICLLPWN*WLTGES
Trigger: AGACTCCCCAGTCAACCAGCAGTTCCATGGCAGAAG...ACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp CTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTTTGGCTCATAGGACATaGGCCCCATCATGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LACAMGRPRAFVVGPLICLAHRT*APSCQR
Trigger: CCTCTGACATGATGGGGCGCATGTCCTATGAGCCAA...ACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTAGCTGTGGGGCCCCAGTaGTCATGTTTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVAVGPQ*SCFPQA
Trigger: GGCCTGAGGGAAACATGAGCACTGGGGCCCCACAGC...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTGGCTGGGCAGCTTGTTaGTGGCTGGCAGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSGWAAC*WLAGWG
Trigger: GCCCCAGCCTGCCAGCCAGCAACAAGCTGCCCAGCC...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCGCCCCTGCCACATGGTaGCTTGCTGAGCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: MGRPRAFVVGPLICVQHFAPATW*LAEQPQ
Trigger: CTGAGGTTGCTCAGCAAGGCACCATGTGGCAGGGGC...GAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTACTCATGGGCGCGTGGTaGCTCCTTTGTTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVLMGAW*LLCWAP
Trigger: AGGGGCCCAACAAAGGAGCCACCACGCGCCCATGAG...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp CCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGACTGGGTGGCCGAGGTaGCATCTGGTTGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PRAFVVGPLICVQHFICSTGWPR*HLVAWH
Trigger: GTGCCAGGCAACCAGATGCCACCTCGGCCACCCAGT...CGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTCTGCACTGGGGTAGTTaGCATTGGGCAAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: GTIWGLACAMGRPRAFVVLHWGS*HWARHY
Trigger: ATAATGCCTTGCCCAATGCCAACTACCCCAGTGCAG...AACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCAAGGCCGGTTGCCCATaGAGGCGTGACTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: GRPRAFVVGPLICVQHFIKAGCP*RRDSSS
Trigger: GGAGGATGAGTCACGCCTCCATGGGCAACCGGCCTT...GATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCCTGGCGGCCTGTTTTaGATAGAGTTGGCAGCAACA +
Preference number: 4 (lower is better)
Translates to: ACAMGRPRAFVVGPLICVPGGLF*IELAAT
Trigger: TGTTGCTGCCAACTCTATCCAAAACAGGCCGCCAGG...CACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCATATTGGGGTAGCCTaGCGGCCTGTTTTGGATAGA +
Preference number: 4 (lower is better)
Translates to: IWGLACAMGRPRAFVVGPHIGVA*RPVLDR
Trigger: TCTATCCAAAACAGGCCGCCAGGCTACCCCAATATG...AGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACTTCTCCGGTGCGGTTCTCCATTaGCCGGGGCAGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TGFFRSLRKRTIVLYNFSGAVLH*PGQGSR
Trigger: CCTGCTCCCCTGCCCCGGCCAATGGAGAACCGCACC...GGAGAAGTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR CCA 90 bp CCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCAGGAACCCTCCATGGGAGCTaGACTAGACACCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PGSAGTVWRQGCPLGSPGTLHGS*TRHLAE
Trigger: TTCAGCAAGGTGTCTAGTCCAGCTCCCATGGAGGGT...TCCTGGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp CGGCACACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACGGTGGGGGCCCCTCCTaGTCTGTTGTCCCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: RHTGFFRSLRKRTIVLYNGGGPS*SVVPGV
Trigger: TACACCAGGGACAACAGACCAGGAGGGGCCCCCACC...GTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGTGTGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGTGATCCGTTTTTCTaGAGGTCCATCAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPILPFCTAMARAARLSPCDPFF*RSIRWG
Trigger: CCCCCACCTGATGGACCTCCAGAAAAACGGATCACA...GGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp GGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTTCTGCTGGAACTGTGTaGCGGCAAGGCTGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: GGCRYCPSALQWHELPGCSAGTV*RQGCPL
Trigger: TAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGA...ACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGAGTGTAACCAAGGGTTCTCGTCCACCTTaGCCAAGGCAAGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: SGYGDRSNCPEMLASVTKGSRPP*PRQAAR
Trigger: GCGCGCTGCTTGCCTTGGCCAAGGTGGACGAGAACC...CTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCCGACCTGCGCGGCCATaGTCCCCGCTGTCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCRPARP*SPLSRP
Trigger: CGGACGAGACAGCGGGGATCATGGCCGCGCAGGTCG...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGGAGTCTGGCCCTGTTaGCCATACCCGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLGVWPC*PYPLGP
Trigger: AGGCCCCAGCGGGTATGGTCAACAGGGCCAGACTCC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp GAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGATCTTGGGCAATGCTTaGTTGGTTCATGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: EGPYGGWRVPWEGHEPSWILGNA*LVHGRM
Trigger: CATCCTTCCATGAACCAATCAAGCATTGCCCAAGAT...CCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp TCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGAGTGTAACCAAGGTTGGGGCCCTGCCCTaGGGACATGAAGGGATCACT +
Preference number: 4 (lower is better)
Translates to: SGYGDRSNCPEMLASVTKVGALP*GHEGIT
Trigger: AGTGATCCCTTCATGTCCTCAGGGCAGGGCCCCAAC...CTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466382.2
CDS-3UTR TCA 90 bp TGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGTCGTGGTTGGCCCTCTaGTCTGTGTGCAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: CAMGRPRAFVVGPLICVQSWLAL*SVCSIS
Trigger: TGAAATGCTGCACACAGATCAGAGGGCCAACCACGA...CTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp TTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCCAATGTCTTTCATTGTaGGCCGCCTCCTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LPILPFCTAMARAARLSPQCLSL*AASSAS
Trigger: TGAAGCAGAGGAGGCGGCTCACAATGAAAGACATTG...GGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR TCA 90 bp GGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGCCAGGAGACCAGACTTaGGGGACATCATTACCCGCC +
Preference number: 4 (lower is better)
Translates to: GRQMLSGYGDRSNCPEMLPGDQT*GTSLPA
Trigger: GGCGGGTAATGATGTCCCTCAAGTCTGGTCTCCTGG...CAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp GACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGAGCATTTCATTAACCTaGGCTTTGATGGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: DHMGAGVCHGKATSLRGWSISLT*ALMASG
Trigger: GCCAGAGGCCATCAAAGCTCAGGTTAATGAAATGCT...CCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTTTCCTGCCCGGCGGCTaGCTTCATTTCCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSFLPGG*LHFPAL
Trigger: GAGCGCGGGGAAATGAAGGCAGCCGCCGGGCAGGAA...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR GCA 90 bp GGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATGGAGGTCCCTGTTGCTaGGAGTATGGGTTAGTCCCG +
Preference number: 4 (lower is better)
Translates to: GKATSLRGWPSDLCAAFHGGPCC*EYGLVP
Trigger: CGGGACTAACCCATACTCGCAGCAACAGGGACCTCC...ATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTATACCCATGTCCTTGCTaGGGTCCTGACGGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVYPCPC*GPDGGP
Trigger: GGGACCTCCGTCAGGACCGCAGCAAGGACATGGGTA...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTAGGGTACCCATGTCCTTaGTGCGGTCCTGACGGAGGT +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVGYPCP*CGPDGG
Trigger: ACCTCCGTCAGGACCGCAGCAAGGACATGGGTACCC...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCCGCCCATGGCACTCTaGGCCCGGCCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGPPMAL*ARPCMV
Trigger: GACCATGCAGGGCCGGGCGCAGAGTGCCATGGGCGG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTATGCTGTGTCGTCGACTaGTGGGAGGGGTATGGAGCC +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVCCVVD*WEGYGA
Trigger: GGCTCCATACCCCTCCCAGCAGTCGACGACACAGCA...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp TGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGTCTGCTCTCCTTGGCTaGTGGAAATCCCTGATGTGC +
Preference number: 4 (lower is better)
Translates to: CAMGRPRAFVVGPLICVQSALLG*WKSLMC
Trigger: GCACATCAGGGATTTCCAGCAGCCAAGGAGAGCAGA...CTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGGAGCTTTCCTCATaGTGCCATAAGGATCCTTAT +
Preference number: 4 (lower is better)
Translates to: GAGVCHGKATSLRGWPSDLELSS*CHKDPY
Trigger: ATAAGGATCCTTATGGCAGCATGAGGAAAGCTCCAG...ATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTACATCTCCCCTTCGTaGCGCTTGGCAGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RPRAFVVGPLICVQHFICYISPS*RLAGGP
Trigger: TGGCCCTCCTGCCAAGCGGCACGAAGGGGAGATGTA...ACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGTACTGGGGGACCTaGCTTCTGCATTTTCATCCC +
Preference number: 4 (lower is better)
Translates to: KPRRLPILPFCTAMARAARYWGT*LLHFHP
Trigger: GGGATGAAAATGCAGAAGGCAGGTCCCCCAGTACCT...GGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR GCA 90 bp CCTCCTGGTCTGTTGTCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGGTGAGCCGCCTCCTCTaGTTCAACACAGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PPGLLSLVYPLLLSHASEVSRLL*FNTGCV
Trigger: CACACAGCCTGTGTTGAAGCAGAGGAGGCGGCTCAC...CTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR GCA 90 bp TCCTGGTCTGTTGTCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGGGCCACCAATCCGCCAGTaGAGCAGGCCACTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: SWSVVPGVPSAVVTCFRGPPIRQ*SRPLSN
Trigger: GTTTGACAGTGGCCTGCTGCACTGGCGGATTGGTGG...CCCTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp TCTAGGAAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGATCTGGGTGCTTGTGGTaGAGCAGGATCAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SRKPRRLPILPFCTAMARSGCLW*SRISLP
Trigger: GGGCAAGCTGATCCTGCTGCACCACAAGCACCCAGA...TCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp GGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGTCAAAGGGTGGGTTCTaGATGTGGAGGAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GRQMLSGYGDRSNCPEMLSKGGF*MWRRLA
Trigger: GGCCAGCCTCCTCCACATGCAGAACCCACCCTTTGA...CAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGTACCGCTGCGGGGTCTaGGACCCGTATGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLYRCGV*DPYGCP
Trigger: AGGGCAGCCATACGGGTCCCAGACCCCGCAGCGGTA...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCGAAAGGAGACTGAGCTaGATTACTCTGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TIWGLACAMGRPRAFVVGERRLS*ITLLSL
Trigger: CAAGGAGAGCAGAGTAATCCAGCTCAGTCTCCTTTC...GCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGGAGACTGAGCAACACTaGCGGGAGAGCCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: PRAFVVGPLICVQHFICSETEQH*RESQQG
Trigger: CCCCTGTTGGCTCTCCCGCCAGTGTTGCTCAGTCTC...CGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGATGATGCTGTCCGACTaGCCACTGGGTGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: KATSLRGWPSDLCAAFHLMMLSD*PLGGRG
Trigger: ACCTCGGCCACCCAGTGGCCAGTCGGACAGCATCAT...CAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCGTTGACTGGGGAGTCTaGGGCCCCTGCATAGATCCT +
Preference number: 4 (lower is better)
Translates to: GRPRAFVVGPLICVQHFIVDWGV*GPCIDP
Trigger: AGGATCTATGCAGGGGCCCCAGACTCCCCAGTCAAC...GATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCTGATACCCAGGGTTTaGAGTCATGGAATTCCGCTT +
Preference number: 4 (lower is better)
Translates to: TIWGLACAMGRPRAFVVGLIPRV*SHGIPL
Trigger: AAGCGGAATTCCATGACTCCAAACCCTGGGTATCAG...GCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCATATGTGCCATCCATTaGCCGCTTGTAATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PYGGWRVPWEGHEPSWLAICAIH*PLVILL
Trigger: CAGCAGAATTACAAGCGGCCAATGGATGGCACATAT...GGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCCTGCCCAGTGCTGTATaGCACGCTGTACATCTCCCC +
Preference number: 4 (lower is better)
Translates to: MGRPRAFVVGPLICVQHFLPSAV*HAVHLP
Trigger: GGGGAGATGTACAGCGTGCCATACAGCACTGGGCAG...GAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCAGGCTGGGGCTGGGCTaGGGGCAACTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIRLGLG*GQLLLL
Trigger: CAGCAGCAGCAGTTGCCCCCAGCCCAGCCCCAGCCT...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTCAGCTTGTTGCTGGCTaGCAGGCTGGGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSQLVAG*QAGAGL
Trigger: CAGCCCAGCCCCAGCCTGCCAGCCAGCAACAAGCTG...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp GACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGGCCCATCATTTGTGGTaGCATGTTTTGCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: DHMGAGVCHGKATSLRGWAHHLW*HVLLGI
Trigger: AATGCCCAGCAAAACATGCCACCACAAATGATGGGC...CCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCAGGAGGTTGCCGATACTGCCTCTCGAAGTGGGTCTaGATATGCTCAGTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: TVWRQGCPLGSPGGCRYCLSKWV*ICSVVS
Trigger: GGACACCACTGAGCATATCCAGACCCACTTCGAGAG...GCAGTATCGGCAACCTCCTGGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTATGCTTCCGAGGGGCTaGTGGGCAGGGTGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSMLPRG*WAGCVR
Trigger: CCTCACGCACCCTGCCCACCAGCCCCTCGGAAGCAT...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp CCGGTGGCTCTGTGCTGGGCTAATGCCAAATGGAAACTTGCTGCTCTCCTTGATGGTGGGGGCCCCTCCTaGTCTGTTGTCCCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: PVALCWANAKWKLAALLDGGGPS*SVVPGV
Trigger: TACACCAGGGACAACAGACCAGGAGGGGCCCCCACC...ATCAAGGAGAGCAGCAAGTTTCCATTTGGCATTAGCCCAGCACAGAGCCACCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TCCTGGTCTGTTGTCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGGGCCTTCTGCACTGCAATaGCACGAGCTGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SWSVVPGVPSAVVTCFRGPSALQ*HELPGC
Trigger: ACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGG...CCCTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGAGTGTAACCAAGTGGAGGAGGCTGGCCTaGCTCTGCTGGAACTGTGTG +
Preference number: 4 (lower is better)
Translates to: SGYGDRSNCPEMLASVTKWRRLA*LCWNCV
Trigger: CACACAGTTCCAGCAGAGCCAGGCCAGCCTCCTCCA...CTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCAGAGTAAACTCTGAGTaGTTCTCGTCCACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LPILPFCTAMARAARLSPRVNSE*FSSTLA
Trigger: GGCCAAGGTGGACGAGAACCACTCAGAGTTTACTCT...GGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGAGCTGGGCACGTGGCTaGCCCGAGCAGCGAGACCCC +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGSWARG*PEQRDP
Trigger: GGGGTCTCGCTGCTCGGGCCAGCCACGTGCCCAGCT...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430799.7
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGAGGAGCTGGGCACGTaGCTGGCCCGAGCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGEELGT*LARAAR
Trigger: TCTCGCTGCTCGGGCCAGCCACGTGCCCAGCTCCTC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430799.7
CDS-3UTR TCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTAGTCCCGCCATATGGCTaGGGTCTCATCTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVVPPYG*GLILPI
Trigger: GATGGGCAAGATGAGACCTCAGCCATATGGCGGGAC...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGTCCTTGCTGCGGTCCTaGCGGAGGTCCCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLSLLRS*RRSLLL
Trigger: CAGCAACAGGGACCTCCGTCAGGACCGCAGCAAGGA...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGGTCCTGAGCGAGACTaGGCAACACTGGCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLGPERD*ATLAGE
Trigger: CTCTCCCGCCAGTGTTGCTCAGTCTCGCTCAGGACC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTAAGGCGAGAGTGGTCCTaGGCGAGACTGAGCAACACT +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVRREWS*ARLSNT
Trigger: AGTGTTGCTCAGTCTCGCTCAGGACCACTCTCGCCT...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp ATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCGGGGTCCCTGAGGGTTaGTCATGCCAGCCATACTAT +
Preference number: 4 (lower is better)
Translates to: MGRPRAFVVGPLICVQHFGVPEG*SCQPYY
Trigger: ATAGTATGGCTGGCATGATCAACCCTCAGGGACCCC...GAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp ATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCGCTGGCAGCACTGCTTaGTGTGCCCACATTGAGGTT +
Preference number: 4 (lower is better)
Translates to: MGRPRAFVVGPLICVQHFAGSTA*CAHIEV
Trigger: AACCTCAATGTGGGCACATCAAGCAGTGCTGCCAGC...GAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp ACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACTTCTCCCTGGGTTGGAAGGCATaGGATTCGGCTGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TGFFRSLRKRTIVLYNFSLGWKA*DSAVGP
Trigger: GGGCCCCACAGCCGAATCTCATGCCTTCCAACCCAG...GGAGAAGTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466382.2
CDS-3UTR TCA 90 bp ACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCTGAGCCAGCATACAGCAGGATGTTaGTGGTATCTAATGCCCATG +
Preference number: 4 (lower is better)
Translates to: TALLHCNGTSCQAVPLSQHTAGC*WYLMPM
Trigger: CATGGGCATTAGATACCATCAACATCCTGCTGTATG...CTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp CTGGCCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCATTGCCTGGCACAAATaGCAGGCTTCGAATGGTATT +
Preference number: 4 (lower is better)
Translates to: LAWLCWNCVAARLSSRKPIAWHK*QASNGI
Trigger: AATACCATTCGAAGCCTGTCATTTGTGCCAGGCAAT...GGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTGCGGGGCTCCGCTGCTaGGCTGCGCTCGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTAGLRC*AALAPL
Trigger: GAGAGGAGCGAGCGCAGCGCAGCAGCGGAGCCCCGC...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR GCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTGCCTCCTCCCGCTGCTaGTGCTCGGCTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSASSRC*CSAFFS
Trigger: GCTGAAGAAAGCCGAGCAGCAGCAGCGGGAGGAGGC...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGGCTGGCTCTGGGGGTaGTGCTGTGTCGTCGACTGC +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGGWLWG*CCVVDC
Trigger: GCAGTCGACGACACAGCAGCACCCCCAGAGCCAGCC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCGGGAAGGGCCTCGGATaGCAGGCAGGTGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCGKGLG*QAGEGR
Trigger: CCTCCCCTCACCTGCCTGGCATCCGAGGCCCTTCCC...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp TGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATGCCATAAGGTGGGATaGCAGGCTGTCCATGCATTT +
Preference number: 4 (lower is better)
Translates to: CHGKATSLRGWPSDLCAACHKVG*QAVHAF
Trigger: AAATGCATGGACAGCCTGGCATCCCACCTTATGGCA...TGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTATCCCTGGAGGGAGTGTaGCATAAGGTGGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVSLEGV*HKVGCQ
Trigger: CTGGCATCCCACCTTATGGCACACTCCCTCCAGGGA...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCTTGGGTGTCCCATCTaGCTTGTTGTTCATTTTGGT +
Preference number: 4 (lower is better)
Translates to: TIWGLACAMGRPRAFVVGLGCPI*LVVHFG
Trigger: ACCAAAATGAACAACAAGGCAGATGGGACACCCAAG...GCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTCTCCCCGTTCAATCTTaGATTCAAAGGCATAGAGAC +
Preference number: 4 (lower is better)
Translates to: RDHMGAGVCHGKATSLRGLPVQS*IQRHRD
Trigger: GTCTCTATGCCTTTGAATGCAAGATTGAACGGGGAG...ACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCCGCCGTTGGGGCCCTaGCCTGAGGACATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGPPLGP*PEDMKG
Trigger: TCCCTTCATGTCCTCAGGGCAGGGCCCCAACGGCGG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGCTGTGGGGCCCCAGTaGTCATGTTTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLAVGPQ*SCFPQA
Trigger: GGCCTGAGGGAAACATGAGCACTGGGGCCCCACAGC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTGCTGTGGGGCCCCAGTaGTCATGTTTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSAVGPQ*SCFPQA
Trigger: GGCCTGAGGGAAACATGAGCACTGGGGCCCCACAGC...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTGGCTGCCAGAAGGGGTaGCTTGGGTGGAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: RPRAFVVGPLICVQHFICGCQKG*LGWRTD
Trigger: ATCAGTTCTCCACCCAAGGCACCCCTTCTGGCAGCC...ACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGATGGGGGCTGGCGTGTaGCATGGGAAGGCCACGAGC +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGMGAGV*HGKATS
Trigger: GCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCAT...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGGGGCAGGTGCTATGTaGGAGGCAGGTACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLGAGAM*EAGTGG
Trigger: TCCCCCAGTACCTGCCTCGCACATAGCACCTGCCCC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp TTTCATAAGTTAGTGGTGCCTGCTTCCGTTCTGGGTGCTTGTGGTGCAGCAGGAGGGGCAGGTGCTATGTaGGAGGCAGGTACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FHKLVVPASVLGACGAAGGAGAM*EAGTGG
Trigger: TCCCCCAGTACCTGCCTCGCACATAGCACCTGCCCC...TCCTGCTGCACCACAAGCACCCAGAACGGAAGCAGGCACCACTAACTTATGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR GCA 90 bp CTGAACCTCCCAGGATCCAGTAGCGTTCTCTGTCCTGGGTCACCCACCTCATACGTTCCGGTGGCTCTGTaGTGGGCTAATGCCAAATGG +
Preference number: 4 (lower is better)
Translates to: LNLPGSSSVLCPGSPTSYVPVAL*WANAKW
Trigger: CCATTTGGCATTAGCCCAGCACAGAGCCACCGGAAC...GTATGAGGTGGGTGACCCAGGACAGAGAACGCTACTGGATCCTGGGAGGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp GGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGTGCTTCCGTTCTGGGTaGTTGTGGTGCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: GRQMLSGYGDRSNCPEMLCFRSG*LWCSRI
Trigger: GATCCTGCTGCACCACAAGCACCCAGAACGGAAGCA...CAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp ACAGGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTCCAAGACCAGTCTCTaGGGGGAAAGGACGGCATTG +
Preference number: 4 (lower is better)
Translates to: TGRQMLSGYGDRSNCPEMSKTSL*GERTAL
Trigger: CAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGA...CATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp CTGAACCTCCCAGGATCCAGTAGCGTTCTCTGTCCTGGGTCACCCACCTCATACGGAGGTTGCCGATACTaGCCTTCTGCACTGCAATGG +
Preference number: 4 (lower is better)
Translates to: LNLPGSSSVLCPGSPTSYGGCRY*PSALQW
Trigger: CCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCC...GTATGAGGTGGGTGACCCAGGACAGAGAACGCTACTGGATCCTGGGAGGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGGGCTCATGGGCGCGTaGTGGCTCCTTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIGLMGA*WLLCWA
Trigger: GGCCCAACAAAGGAGCCACCACGCGCCCATGAGCCC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTATCTGATCCATTGGACTaGATGGCTGAGGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVSDPLD*MAEGSG
Trigger: CCCGGACCCCTCAGCCATCCAGTCCAATGGATCAGA...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTACCGCTGCGGGGTCTaGGACCCGTATGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGYRCGV*DPYGCP
Trigger: AGGGCAGCCATACGGGTCCCAGACCCCGCAGCGGTA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTAAGAGAGGCCGCCCATaGCACTCTGCGCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGKRGRP*HSAPGP
Trigger: AGGGCCGGGCGCAGAGTGCCATGGGCGGCCTCTCTT...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGAAGAGAGGCCGCCCATaGCACTCTGCGCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGKRGRP*HSAPGP
Trigger: AGGGCCGGGCGCAGAGTGCCATGGGCGGCCTCTCTT...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGAGCGTCGAGGGTGCTaGCTGCTGAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLERRGC*LLRLLL
Trigger: CAGCAGCAACCTCAGCAGCCAGCACCCTCGACGCTC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCTGGGCAATGCTTGATTaGTTCATGGAAGGATGCATG +
Preference number: 4 (lower is better)
Translates to: TIWGLACAMGRPRAFVVGWAMLD*FMEGCM
Trigger: CATGCATCCTTCCATGAACCAATCAAGCATTGCCCA...GCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGTGGGGTAGTTGGCATTaGGCAAGGCATTATAGTTTG +
Preference number: 4 (lower is better)
Translates to: GPYGGWRVPWEGHEPSWLWGSWH*ARHYSL
Trigger: CAAACTATAATGCCTTGCCCAATGCCAACTACCCCA...CAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCAGAATTGTTGGCCATaGTTCCACCCATGGAATATG +
Preference number: 4 (lower is better)
Translates to: DHMGAGVCHGKATSLRGWQNCWP*FHPWNM
Trigger: CATATTCCATGGGTGGAACCATGGCCAACAATTCTG...CCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTGGGCTGGGACTTCTTaGAATCAGCAGCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: AMGRPRAFVVGPLICVQHWAGTS*NQQLQR
Trigger: TCTTTGCAGCTGCTGATTCCAAGAAGTCCCAGCCCA...ATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGATGGAATTCCGCTTCTaGAATGTGGAGTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: GPYGGWRVPWEGHEPSWLMEFRF*NVESLP
Trigger: TGGAAGTGACTCCACATTCCAGAAGCGGAATTCCAT...CAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTACTGCCCAGTGCTGTATaGCACGCTGTACATCTCCCC +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVLPSAV*HAVHLP
Trigger: GGGGAGATGTACAGCGTGCCATACAGCACTGGGCAG...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGAGGCTGGGGCTGGGCTaGGGGCAACTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGRLGLG*GQLLLL
Trigger: CAGCAGCAGCAGTTGCCCCCAGCCCAGCCCCAGCCT...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp GTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCACGGTCTCGGCCAAACTaGAATGGAAATTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VCHGKATSLRGWPSDLCARSRPN*NGNWFW
Trigger: CCAGAACCAATTTCCATTCCAGTTTGGCCGAGACCG...TGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTTGTTTTGCTGGGCATTaGTGCCAGGGGGTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HGKATSLRGWPSDLCAAFCFAGH*CQGVQR
Trigger: TCTCTGCACCCCCTGGCACCAATGCCCAGCAAAACA...AAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGGGTGGCATGTTTTGCTaGGCATTGGTGCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PRAFVVGPLICVQHFICSGGMFC*ALVPGG
Trigger: ACCCCCTGGCACCAATGCCCAGCAAAACATGCCACC...CGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCCAGCTGATGCCTGTATaGGGCCGCCCATCATTTGTG +
Preference number: 4 (lower is better)
Translates to: GRPRAFVVGPLICVQHFIQLMPV*GRPSFV
Trigger: CACAAATGATGGGCGGCCCCATACAGGCATCAGCTG...GATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCGTGATTCTGCATGCTTaGTGGGGGCTGGTAGTTAGA +
Preference number: 4 (lower is better)
Translates to: KPRRLPILPFCTAMARAAVILHA*WGLVVR
Trigger: TCTAACTACCAGCCCCCACCAAGCATGCAGAATCAC...GGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR CCA 90 bp CTGAACCTCCCAGGATCCAGTAGCGTTCTCTGTCCTGGGTCACCCACCTCATACGCAGGGGAGCAGGGCTaGATACCTGAGGAATGTGAT +
Preference number: 4 (lower is better)
Translates to: LNLPGSSSVLCPGSPTSYAGEQG*IPEECD
Trigger: ATCACATTCCTCAGGTATCCAGCCCTGCTCCCCTGC...GTATGAGGTGGGTGACCCAGGACAGAGAACGCTACTGGATCCTGGGAGGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGTGCGGTTCTCCATTaGCCGGGGCAGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGGAVLH*PGQGSR
Trigger: CCTGCTCCCCTGCCCCGGCCAATGGAGAACCGCACC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGATGCTTCCGAGGGGCTaGTGGGCAGGGTGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGMLPRG*WAGCVR
Trigger: CCTCACGCACCCTGCCCACCAGCCCCTCGGAAGCAT...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGTGGAGGTCCATCAGGTaGGGGCCCCTCCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLWRSIR*GPLLVC
Trigger: ACAGACCAGGAGGGGCCCCCACCTGATGGACCTCCA...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGGTTCTCGTCCACCTTaGCCAAGGCAAGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLGSRPP*PRQAAR
Trigger: GCGCGCTGCTTGCCTTGGCCAAGGTGGACGAGAACC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp ACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCAGGAGGTTGCCGATACTGCAGAGTAAACTCTGAGTaGTTCTCGTCCACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TVWRQGCPLGSPGGCRYCRVNSE*FSSTLA
Trigger: GGCCAAGGTGGACGAGAACCACTCAGAGTTTACTCT...GCAGTATCGGCAACCTCCTGGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp GACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGGCCCATCTGATCCATTaGACTGGATGGCTACAAAAT +
Preference number: 4 (lower is better)
Translates to: DHMGAGVCHGKATSLRGWAHLIH*TGWLQN
Trigger: ATTTTGTAGCCATCCAGTCCAATGGATCAGATGGGC...CCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGTTGCTGTCAAAATCCTaGGCCCGTGCCCAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: GRQMLSGYGDRSNCPEMLLLSKS*ARAQRQ
Trigger: TTGCCTCTGGGCACGGGCCCAGGATTTTGACAGCAA...CAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532781.1
3UTR CAA 72 bp TCTTCCCCACCCTCCATGGGAGCTGGACTAGACACCTaGCTGAACCTCCCAGGATCCAGTAGCGTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SSPPSMGAGLDT*LNLPGSSSVLC
Trigger: ACAGAGAACGCTACTGGATCCTGGGAGGTTCAGCAAGGTGTCTAGTCCAGCTCCCATGGAGGGTGGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGGAGTCTGGCCCTGTTaGCCATACCCGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGGVWPC*PYPLGP
Trigger: AGGCCCCAGCGGGTATGGTCAACAGGGCCAGACTCC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGAGTCTGGCCCTGTTaGCCATACCCGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGGVWPC*PYPLGP
Trigger: AGGCCCCAGCGGGTATGGTCAACAGGGCCAGACTCC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp ACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGGTAGGCGAGAGTGGTCCTaGGCGAGACTGAGCAACACT +
Preference number: 4 (lower is better)
Translates to: TSLRGWPSDLCAAFHLFGRREWS*ARLSNT
Trigger: AGTGTTGCTCAGTCTCGCTCAGGACCACTCTCGCCT...ACCGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGTTGGGGCCCTGCCCTaGGGACATGAAGGGATCACT +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLVGALP*GHEGIT
Trigger: AGTGATCCCTTCATGTCCTCAGGGCAGGGCCCCAAC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR TCA 90 bp GCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGTTCTGCTGTTGCTGTTaGTACATTGTAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ACAMGRPRAFVVGPLICVFCCCC*YIVVCW
Trigger: CCAGCAGACTACAATGTATCAACAGCAACAGCAGAA...CACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCTGAGCAACCTCAGCTaGTGCCTGTATGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGLSNLS*CLYGAA
Trigger: GGCGGCCCCATACAGGCATCAGCTGAGGTTGCTCAG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGGTGGGCAGGGTGCGTaGGGCCGGGAAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPGGQGA*GREGSS
Trigger: GCTGCTGCCTTCCCGGCCTCACGCACCCTGCCCACC...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR TCA 90 bp GGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGCTCCTTGATGGCCTCTaGACTCTTAGCTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: GRQMLSGYGDRSNCPEMLLLDGL*TLSSIL
Trigger: GAGGATGGAGCTAAGAGTTCAGAGGCCATCAAGGAG...CAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTGTCCTGGGCTTCAGCTaGAGGGCAAACTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSVLGFS*RANCPV
Trigger: CACTGGGCAGTTTGCCCTTCAGCTGAAGCCCAGGAC...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCAGAAAGGCGTGAGGTaGTGGAGGGAGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGQKGVR*WREGRW
Trigger: CCACCTCCCCTCCCTCCATCACCTCACGCCTTTCTG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR TCA 90 bp CCTCCTGGTCTGTTGTCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGCTGAGGGGAGTAAGGTaGGGACAAGGAACAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PPGLLSLVYPLLLSHASELRGVR*GQGTER
Trigger: CCTTTCTGTTCCTTGTCCTCACCTTACTCCCCTCAG...CTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466382.2
CDS-3UTR TCA 90 bp GGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATACTTTGAAAGAGCAATaGGACCAACCTAGTAACCTT +
Preference number: 4 (lower is better)
Translates to: GAGVCHGKATSLRGWPSDTLKEQ*DQPSNL
Trigger: AAGGTTACTAGGTTGGTCTCATTGCTCTTTCAAAGT...ATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGTCATCGGGTACCGCTaGGGGGTCTGGGACCCGTAT +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIVIGYR*GVWDPY
Trigger: ATACGGGTCCCAGACCCCGCAGCGGTACCCGATGAC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTCCGCCCATGGCACTCTaGGCCCGGCCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTPPMAL*ARPCMV
Trigger: GACCATGCAGGGCCGGGCGCAGAGTGCCATGGGCGG...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGGAGAGCGTCGAGGGTaGTGGCTGCTGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIGERRG*WLLRLL
Trigger: CAGCAACCTCAGCAGCCAGCACCCTCGACGCTCTCC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGGAGAGCGTCGAGGGTaGTGGCTGCTGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGGERRG*WLLRLL
Trigger: CAGCAACCTCAGCAGCCAGCACCCTCGACGCTCTCC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCTGGTTGCCTGGCACTaGAGCAGGCGAGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGLVAWH*SRREWS
Trigger: GGACCACTCTCGCCTGCTGCAGTGCCAGGCAACCAG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGGCCATAAGGCCGGTTaGCCATGGAGGCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLGHKAG*PWRRDS
Trigger: TGAGTCACGCCTCCATGGGCAACCGGCCTTATGGCC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTAGACACTGGATATACTaGTTTTTCAAGGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RDHMGAGVCHGKATSLRGRHWIY*FFKELA
Trigger: TGCCAGCTCCTTGAAAAAGCAGTATATCCAGTGTCT...ACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCCGCCGTTGGGGCCCTaGCCTGAGGACATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGPPLGP*PEDMKG
Trigger: TCCCTTCATGTCCTCAGGGCAGGGCCCCAACGGCGG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTGCTGCCCCTGCCCAGTaGTGTATGGCACGCTGTACA +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSAAPAQ*CMARCT
Trigger: TGTACAGCGTGCCATACAGCACTGGGCAGGGGCAGC...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCTGGCAGGATAGGCATTaGCATACTGGTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: TIWGLACAMGRPRAFVVGWQDRH*HTGCIH
Trigger: ATGTATACAACCAGTATGGCAATGCCTATCCTGCCA...GCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGATTGGTGCCAGGGGGTaGAGAGACACGGTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGIGARG*RDTVSA
Trigger: GGCCGAGACCGTGTCTCTGCACCCCCTGGCACCAAT...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp ACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGGTTTTGCTGGGCATTGGTaGCAGGGGGTGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: TSLRGWPSDLCAAFHLFGFAGHW*QGVQRH
Trigger: GTGTCTCTGCACCCCCTGGCACCAATGCCCAGCAAA...ACCGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTGCCCCTGCCACATGGTaGCTTGCTGAGCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSAPATW*LAEQPQ
Trigger: CTGAGGTTGCTCAGCAAGGCACCATGTGGCAGGGGC...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGGGGCAGGTGCTATGTaGGAGGCAGGTACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIGAGAM*EAGTGG
Trigger: TCCCCCAGTACCTGCCTCGCACATAGCACCTGCCCC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCACCCACCAATCCGCCAGTaGAGCAGGCCACTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: MLASVTKVFSRSISKQSHPPIRQ*SRPLSN
Trigger: GTTTGACAGTGGCCTGCTGCACTGGCGGATTGGTGG...GTGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTATCCAAGACCAGTCTCTaGGGGGAAAGGACGGCATTG +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVSKTSL*GERTAL
Trigger: CAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGA...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCACGGAAGCCCAGGAGGTTaGCGATACTGCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: MLASVTKVFSRSISKQSHGSPGG*RYCPSA
Trigger: TGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCC...GTGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTGCGCCCGGCCCTGCATaGTCATCGGGTACCGCTGCG +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTAPGPA*SSGTAA
Trigger: CGCAGCGGTACCCGATGACCATGCAGGGCCGGGCGC...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCCGGGGACTGCTGATGTaGAGGCTGGGATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIRGLLM*RLGWLL
Trigger: CAGCAGCCATCCCAGCCTCCACATCAGCAGTCCCCG...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCGGGGACTGCTGATGTaGAGGCTGGGATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGRGLLM*RLGWLL
Trigger: CAGCAGCCATCCCAGCCTCCACATCAGCAGTCCCCG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCTGTGTCGTCGACTGCTaGGAGGGGTATGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDICVVDC*EGYGAG
Trigger: CCCGGCTCCATACCCCTCCCAGCAGTCGACGACACA...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTGTGTCGTCGACTGCTaGGAGGGGTATGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGCVVDC*EGYGAG
Trigger: CCCGGCTCCATACCCCTCCCAGCAGTCGACGACACA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGAGCGTCGAGGGTGCTaGCTGCTGAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGERRGC*LLRLLL
Trigger: CAGCAGCAACCTCAGCAGCCAGCACCCTCGACGCTC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGTGGCATCTGGTTGCCTaGCACTGCAGCAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLWHLVA*HCSRRE
Trigger: CTCTCGCCTGCTGCAGTGCCAGGCAACCAGATGCCA...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGGCCGAGGTGGCATCTaGTTGCCTGGCACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGGRGGI*LPGTAA
Trigger: TGCTGCAGTGCCAGGCAACCAGATGCCACCTCGGCC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCACTGGGTGGCCGAGGTaGCATCTGGTTGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDITGWPR*HLVAWH
Trigger: GTGCCAGGCAACCAGATGCCACCTCGGCCACCCAGT...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp CATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCAAGGCATTATAGTTTaGCTGCCTGGGGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: HGKATSLRGWPSDLCAAFQGIIV*LPGVAT
Trigger: GGTGGCTACCCCAGGCAGCCAAACTATAATGCCTTG...AAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTAAGGCCGGTTGCCCATaGAGGCGTGACTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSKAGCP*RRDSSS
Trigger: GGAGGATGAGTCACGCCTCCATGGGCAACCGGCCTT...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp GGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTCCACCCATGGAATATaGGGGTCCCTGAGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: GRPRAFVVGPLICVQHFISTHGI*GSLRVD
Trigger: ATCAACCCTCAGGGACCCCCATATTCCATGGGTGGA...GATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTTGGATTTCTTGGATTTaGATTCTGTCTTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GTIWGLACAMGRPRAFVVWISWI*ILSWVS
Trigger: GGACACCCAAGACAGAATCCAAATCCAAGAAATCCA...AACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGGTAGCTGCAAAGATGTCTaGGGGAGGGTCTTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: TSLRGWPSDLCAAFHLFGSCKDV*GRVFSP
Trigger: CGGGGAGAAGACCCTCCCCCAGACATCTTTGCAGCT...ACCGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCAGGGAGGCTGGATCTTaGGCTGGGACTTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: MGRPRAFVVGPLICVQHFREAGS*AGTSWN
Trigger: ATTCCAAGAAGTCCCAGCCCAAGATCCAGCCTCCCT...GAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGCTCCTCCTTCTGCCATaGAACTGCTGGTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: PRAFVVGPLICVQHFICSLLLLP*NCWLTG
Trigger: CCCAGTCAACCAGCAGTTCCATGGCAGAAGGAGGAG...CGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTTCTGACTGTGTGGTGTaGATGCTGGAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: HGKATSLRGWPSDLCAAFSDCVV*MLELVA
Trigger: AGCCACCAACTCCAGCATCCACACCACACAGTCAGA...AAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCTCATTAAAGGCATCCTaGATCCCAACTGAATTGCTC +
Preference number: 4 (lower is better)
Translates to: TIWGLACAMGRPRAFVVGSLKAS*IPTELL
Trigger: GAGCAATTCAGTTGGGATCCAGGATGCCTTTAATGA...GCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp TGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCAGAGGTATTCATACTaGGCTGATACCCAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: CAMGRPRAFVVGPLICVQQRYSY*ADTQGL
Trigger: CAAACCCTGGGTATCAGCCCAGTATGAATACCTCTG...CTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCAGCTTGTTGCTGGCTaGCAGGCTGGGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGQLVAG*QAGAGL
Trigger: CAGCCCAGCCCCAGCCTGCCAGCCAGCAACAAGCTG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTCAGCTTGTTGCTGGCTaGCAGGCTGGGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGQLVAG*QAGAGL
Trigger: CAGCCCAGCCCCAGCCTGCCAGCCAGCAACAAGCTG...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTGCCGCCCATCATTTGTaGTGGCATGTTTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RPRAFVVGPLICVQHFICAAHHL*WHVLLG
Trigger: GCCCAGCAAAACATGCCACCACAAATGATGGGCGGC...ACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTAGCCGCCCATCATTTGTaGTGGCATGTTTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVAAHHL*WHVLLG
Trigger: GCCCAGCAAAACATGCCACCACAAATGATGGGCGGC...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCGGCTGGCGTGTGCCATaGGAAGGCCACGAGCCTTCG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCGWRVP*EGHEPS
Trigger: CGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCC...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGCTGGCGTGTGCCATaGGAAGGCCACGAGCCTTCG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGGWRVP*EGHEPS
Trigger: CGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCTGGTCTGTTGTCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGGGCCCAGAGTGCAGGAATaGAGACTTGCTAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SWSVVPGVPSAVVTCFRGPRVQE*RLARRG
Trigger: ACCTCTCCTAGCAAGTCTCCATTCCTGCACTCTGGG...CCCTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTATCCCGCCGAATCATaGGGGGCTGCACAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGYPAES*GAAQGQ
Trigger: CTGCCCCTGTGCAGCCCCCCATGATTCGGCGGGATA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp CCTCCTGGTCTGTTGTCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGTCAACACAGGCTGTGTaGCTTCAACAGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PPGLLSLVYPLLLSHASESTQAV*LQQSQV
Trigger: CACCTGGCTCTGTTGAAGCCACACAGCCTGTGTTGA...CTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGGTGGGGGCCCCTCCTaGTCTGTTGTCCCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGGGGPS*SVVPGV
Trigger: TACACCAGGGACAACAGACCAGGAGGGGCCCCCACC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTGGAGGTCCATCAGGTaGGGGCCCCTCCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGWRSIR*GPLLVC
Trigger: ACAGACCAGGAGGGGCCCCCACCTGATGGACCTCCA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp CGGCACACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACCACAGACGCAGCGCTTaGCAAGAGAATCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RHTGFFRSLRKRTIVLYNHRRSA*QENPAS
Trigger: ACTGGCAGGATTCTCTTGCCAAGCGCTGCGTCTGTG...GTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGTGTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTACGTTCTGGGTGCTTGTaGTGCAGCAGGATCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVRSGCL*CSRISL
Trigger: CAAGCTGATCCTGCTGCACCACAAGCACCCAGAACG...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTAGTGGAAAAGGGGTCCTaGGCTTCAGCTGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVVEKGS*ASAEGQ
Trigger: TTGCCCTTCAGCTGAAGCCCAGGACCCCTTTTCCAC...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp ACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACTTCTCCTGGAGGAGGCTGGCCTaGCTCTGCTGGAACTGTGTG +
Preference number: 4 (lower is better)
Translates to: TGFFRSLRKRTIVLYNFSWRRLA*LCWNCV
Trigger: CACACAGTTCCAGCAGAGCCAGGCCAGCCTCCTCCA...GGAGAAGTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp CCTGGCTCTGCTGGAACTGTGTGGCGGCAAGGCTGTCCTCTAGGAAGCCCAGGACACGGCTGTCATGACTaGCCAATCAAAAACAGTACA +
Preference number: 4 (lower is better)
Translates to: PGSAGTVWRQGCPLGSPGHGCHD*PIKNST
Trigger: TGTACTGTTTTTGATTGGCCAGTCATGACAGCCGTG...TCCTGGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp CTGAACCTCCCAGGATCCAGTAGCGTTCTCTGTCCTGGGTCACCCACCTCATACTCCCAAGGGAGAAGCTaGACAGCACAGGGTAAACTG +
Preference number: 4 (lower is better)
Translates to: LNLPGSSSVLCPGSPTSYSQGRS*TAQGKL
Trigger: CAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA...GTATGAGGTGGGTGACCCAGGACAGAGAACGCTACTGGATCCTGGGAGGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTGGGAAGCCGTGGTCGTaGGAGTTCTGCTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTGKPWS*EFCWGP
Trigger: GGGGCCCCAGCAGAACTCTCACGACCACGGCTTCCC...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR TCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTACGAAGGTTGGGCATaGGGGGTCTGGGACGGTGGT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGYEGWA*GVWDGG
Trigger: ACCACCGTCCCAGACCCCTCATGCCCAACCTTCGTA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCGGTCCTGAGCGAGACTaGGCAACACTGGCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCGPERD*ATLAGE
Trigger: CTCTCCCGCCAGTGTTGCTCAGTCTCGCTCAGGACC...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGGCTGTCCATGCATTTaGCCTCCGGCACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGGCPCI*PPAPMG
Trigger: CCCCATGGGTGCCGGAGGTCAAATGCATGGACAGCC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTTGCCCATGGAGGCGTaGCTCATCCTCCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGLPMEA*LILPGG
Trigger: CCCTCCAGGGAGGATGAGTCACGCCTCCATGGGCAA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCTGGGGGACACATCCCTaGCCCAACCTGAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIWGTHP*PNLRWH
Trigger: ATGCCACCTCAGGTTGGGTCAGGGATGTGTCCCCCA...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTGAATATGGGGGTCCCTaGGGGTTGATCATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSEYGGP*GLIMPA
Trigger: GGCTGGCATGATCAACCCTCAGGGACCCCCATATTC...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCCCCTGCATAGATCCTaGTCCCGCAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGPLHRS*SRRRGR
Trigger: CCTCCCTCTCCTGCGGGATCAGGATCTATGCAGGGG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCCATGGAACTGCTGGTTaGCTGGGGAGTCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCHGTAG*LGSLGP
Trigger: GGGCCCCAGACTCCCCAGTCAACCAGCAGTTCCATG...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGCACATGGTGCCTTGCTaGGCAACCTCAGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLHMVPC*ATSADA
Trigger: GGCATCAGCTGAGGTTGCTCAGCAAGGCACCATGTG...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTATCGTGGTTGGCCCTCTaGTCTGTGTGCAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVSWLAL*SVCSIS
Trigger: TGAAATGCTGCACACAGATCAGAGGGCCAACCACGA...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp ATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCACAGCAACCCTGGGAGCTaGCTGAGGTTGAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: MLASVTKVFSRSISKQSHSNPGS*LRLKVM
Trigger: CATGACCTTCAACCTCAGTCAGCTCCCAGGGTTGCT...GTGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466382.2
CDS-3UTR TCA 90 bp TTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCAGGCTGTCCCCCGCTTGTCAAACTTACTaGTCAGCTTCTCCTCACTAT +
Preference number: 4 (lower is better)
Translates to: LPILPFCTAMARAARLSPACQTY*SASPHY
Trigger: ATAGTGAGGAGAAGCTGATCAGTAAGTTTGACAAGC...GGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTGGTGGGCAGGGTGCGTaGGGCCGGGAAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIGGQGA*GREGSS
Trigger: GCTGCTGCCTTCCCGGCCTCACGCACCCTGCCCACC...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR TCA 90 bp TTATCTGAGCAGTCCACCACAAATGGATCATTCTTCTGTACGATCTTTACTGGAGGTGGGCAGGGTGCGTaGGGCCGGGAAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSEQSTTNGSFFCTIFTGGGQGA*GREGSS
Trigger: GCTGCTGCCTTCCCGGCCTCACGCACCCTGCCCACC...TCCAGTAAAGATCGTACAGAAGAATGATCCATTTGTGGTGGACTGCTCAGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCTCAGCTTGCCCAGGATaGGCAGCAGCCCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDISACPG*AAALGV
Trigger: AACACCCAGGGCTGCTGCTCATCCTGGGCAAGCTGA...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTCAGCTTGCCCAGGATaGGCAGCAGCCCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGSACPG*AAALGV
Trigger: AACACCCAGGGCTGCTGCTCATCCTGGGCAAGCTGA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR TCA 90 bp GTCAAGGTGCTAGACCGAGTAGACAACATGTCATCCATAGTGGCTGTGATCCGTTCAGCTTGCCCAGGATaGGCAGCAGCCCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: VKVLDRVDNMSSIVAVIRSACPG*AAALGV
Trigger: AACACCCAGGGCTGCTGCTCATCCTGGGCAAGCTGA...ACGGATCACAGCCACTATGGATGACATGTTGTCTACTCGGTCTAGCACCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGTCCTGGGCTTCAGCTaGAGGGCAAACTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIVLGFS*RANCPV
Trigger: CACTGGGCAGTTTGCCCTTCAGCTGAAGCCCAGGAC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp TGTCCCCCTGAGCCAGGTTGGCCAGCAGTACCACAGCCATCTCCCGGCACACCGACAGTACATCACAAATaGCTTGTGAAACCAATGAGT +
Preference number: 4 (lower is better)
Translates to: CPPEPGWPAVPQPSPGTPTVHHK*LVKPMS
Trigger: ACTCATTGGTTTCACAAGTCATTTGTGATGTACTGT...CGGTGTGCCGGGAGATGGCTGTGGTACTGCTGGCCAACCTGGCTCAGGGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTAGTCCCACGGCTGTCATaGCTGGCCAATCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVVPRLS*LANQKQ
Trigger: CTGTTTTTGATTGGCCAGTCATGACAGCCGTGGGAC...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp TCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGAGTGTAACCAAGAATGTGGCATCCCGTTaGTGCAAGGACTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SGYGDRSNCPEMLASVTKNVASR*CKDWES
Trigger: GCTTTCCCAGTCCTTGCATCAACGGGATGCCACATT...CTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466382.2
CDS-3UTR GCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACTCGCGGGGCTCCGCTaGTGCGCTGCGCTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHALAGLR*CAALAP
Trigger: AGGAGCGAGCGCAGCGCAGCAGCGGAGCCCCGCGAG...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR GCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAACCCGCCTCCTCCCGCTaGTGCTGCTCGGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKPASSR*CCSAFF
Trigger: GAAGAAAGCCGAGCAGCAGCAGCGGGAGGAGGCGGG...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR GCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGGGCCCTCGCTTTCCTaGCCGGCGGCTGCCTTCATT +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKGPSLS*PAAAFI
Trigger: AATGAAGGCAGCCGCCGGGCAGGAAAGCGAGGGCCC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR GCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTCTCTCGGCCCCGTCCTaGAGCTCCTTTCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCLSAPS*SSFPSG
Trigger: GCCGCTGGGAAAGGAGCTGCAGGACGGGGCCGAGAG...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR GCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGCCGCTCTGCAGCGCTaGCAGGCCAGGGCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKAALQR*QARALL
Trigger: CAACAAAGCCCTGGCCTGGCAGCGCTGCAGAGCGGC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCTACCCATGTCCTTGCTaGGGTCCTGACGGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIYPCPC*GPDGGP
Trigger: GGGACCTCCGTCAGGACCGCAGCAAGGACATGGGTA...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTGGGACCCGTATGGCTaGCCTGGGTACCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGWDPYG*PGYPCP
Trigger: AGGACATGGGTACCCAGGGCAGCCATACGGGTCCCA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp TGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCTCGATCTTGGGCAATaGTTGATTGGTTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: CAMGRPRAFVVGPLICVQLDLGQ*LIGSWK
Trigger: CTTCCATGAACCAATCAAGCATTGCCCAAGATCGAG...CTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGGAGTCTGGGGCCCCTaGATAGATCCTGATCCCGCA +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGGVWGP*IDPDPA
Trigger: TGCGGGATCAGGATCTATGCAGGGGCCCCAGACTCC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGAGCTGCCGGGTGGAGAACTGATTaGCATAGGAATCATGTCGTT +
Preference number: 4 (lower is better)
Translates to: KPRRLPILPFCTAMARAAGWRTD*HRNHVV
Trigger: AACGACATGATTCCTATGGCAATCAGTTCTCCACCC...GGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466382.2
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGTTTGCTGGGCATTGGTaGCAGGGGGTGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLFAGHW*QGVQRH
Trigger: GTGTCTCTGCACCCCCTGGCACCAATGCCCAGCAAA...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp ATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCACGGGGGACCTGCCTTCTaGATTTTCATCCCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: MLASVTKVFSRSISKQSHGGPAF*IFIPEC
Trigger: GCACTCTGGGATGAAAATGCAGAAGGCAGGTCCCCC...GTGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGCCACCAATCCGCCAGTaGAGCAGGCCACTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLPPIRQ*SRPLSN
Trigger: GTTTGACAGTGGCCTGCTGCACTGGCGGATTGGTGG...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp ACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACTTCTCCTCTGGGTGCTTGTGGTaGAGCAGGATCAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: TGFFRSLRKRTIVLYNFSSGCLW*SRISLP
Trigger: GGGCAAGCTGATCCTGCTGCACCACAAGCACCCAGA...GGAGAAGTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTTCTGGGTGCTTGTGGTaGAGCAGGATCAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSSGCLW*SRISLP
Trigger: GGGCAAGCTGATCCTGCTGCACCACAAGCACCCAGA...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTGCAATGGCACGAGCTaGCAGGCTGTCCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGCNGTS*QAVPLS
Trigger: GCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp ACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACTTCTCCACTGCCCTTCTGCACTaGAATGGCACGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TGFFRSLRKRTIVLYNFSTALLH*NGTSCQ
Trigger: CTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT...GGAGAAGTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp ATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCACCCGATACTGCCCTTCTaGACTGCAATGGCACGAGCT +
Preference number: 4 (lower is better)
Translates to: MLASVTKVFSRSISKQSHPILPF*TAMARA
Trigger: AGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGG...GTGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGGAAGCCCAGGAGGTTaGCGATACTGCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLGSPGG*RYCPSA
Trigger: TGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp CCGGTGGCTCTGTGCTGGGCTAATGCCAAATGGAAACTTGCTGCTCTCCTTGATAAAATCCTGGGCCCGTaGCCAGAGGCAAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PVALCWANAKWKLAALLDKILGP*PEAKEA
Trigger: TGCTTCCTTTGCCTCTGGGCACGGGCCCAGGATTTT...ATCAAGGAGAGCAGCAAGTTTCCATTTGGCATTAGCCCAGCACAGAGCCACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR CCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTAGGAGGCGGAGGCGCTaGAGGAGGGAGGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIRRRRR*RREAAW
Trigger: CCAAGCCGCCTCCCTCCTCCAGCGCCTCCGCCTCCT...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTTGGTGGCTCCTTTGTTaGGCCCCTCCCGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCWWLLC*APPEAA
Trigger: GGCCGCCTCGGGAGGGGCCCAACAAAGGAGCCACCA...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp CCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGGTTAGTCCCGCCATATaGCTGAGGTCTCATCTTGCC +
Preference number: 4 (lower is better)
Translates to: PRAFVVGPLICVQHFICSVSPAI*LRSHLA
Trigger: GGCAAGATGAGACCTCAGCCATATGGCGGGACTAAC...CGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGGTCTGGGACCCGTATaGCTGCCCTGGGTACCCATG +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGGLGPV*LPWVPM
Trigger: CATGGGTACCCAGGGCAGCCATACGGGTCCCAGACC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTGCGCCCGGCCCTGCATaGTCATCGGGTACCGCTGCG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIAPGPA*SSGTAA
Trigger: CGCAGCGGTACCCGATGACCATGCAGGGCCGGGCGC...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCGGGGACTGCTGATGTaGAGGCTGGGATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGRGLLM*RLGWLL
Trigger: CAGCAGCCATCCCAGCCTCCACATCAGCAGTCCCCG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCGAGCGTCGAGGGTGCTaGCTGCTGAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCERRGC*LLRLLL
Trigger: CAGCAGCAACCTCAGCAGCCAGCACCCTCGACGCTC...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGGATACGCAGCCTGCTaGGAGAGCGTCGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGGYAAC*ESVEGA
Trigger: AGCACCCTCGACGCTCTCCCAGCAGGCTGCGTATCC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGCTTGCCCTCCCTTACTaGAGGTCATTGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLLALPY*RSLRGL
Trigger: CAGCCCCCTCAATGACCTCCAGTAAGGGAGGGCAAG...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCTCCTTCTGTCCCCATaGGGAGGTCATCTATTGAAC +
Preference number: 4 (lower is better)
Translates to: HGKATSLRGWPSDLCAAFLLLSP*GGHLLN
Trigger: GTTCAATAGATGACCTCCCCATGGGGACAGAAGGAG...AAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGAGACTGAGCAACACTaGCGGGAGAGCCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGETEQH*RESQQG
Trigger: CCCCTGTTGGCTCTCCCGCCAGTGTTGCTCAGTCTC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTGTCCGACTGGCCACTaGGTGGCCGAGGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGCPTGH*VAEVAS
Trigger: AGATGCCACCTCGGCCACCCAGTGGCCAGTCGGACA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGATGATGCTGTCCGACTaGCCACTGGGTGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGMMLSD*PLGGRG
Trigger: ACCTCGGCCACCCAGTGGCCAGTCGGACAGCATCAT...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTGCGACAGCAGTTTCTTaGGTTTTCCGGTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: RPRAFVVGPLICVQHFICATAVS*VFRFMP
Trigger: GGGCATGAACCGGAAAACCCAAGAAACTGCTGTCGC...ACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp GCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCAAGGGGTGCCTTGGGTaGAGAACTGATTGCCATAGG +
Preference number: 4 (lower is better)
Translates to: ATSLRGWPSDLCAAFHLFKGCLG*RTDCHR
Trigger: CCTATGGCAATCAGTTCTCCACCCAAGGCACCCCTT...GAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTACTGGCAGGCTGGGGCTaGGCTGGGGGCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLLAGWG*AGGNCC
Trigger: GCAGCAGTTGCCCCCAGCCCAGCCCCAGCCTGCCAG...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCACTGGCAGGCTGGGGCTaGGCTGGGGGCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPLAGWG*AGGNCC
Trigger: GCAGCAGTTGCCCCCAGCCCAGCCCCAGCCTGCCAG...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCTGGGGGCCGCCTGCTaGTCGGCGCTCAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKLGAAC*SALSSS
Trigger: GCTGCTACTGAGCGCCGACCAGCAGGCGGCCCCCAG...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTAATGGAAATTGGTTCTaGGGGCCGCCTGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSNGNWF*GPPAGR
Trigger: CCGACCAGCAGGCGGCCCCCAGAACCAATTTCCATT...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCCGTGCTCTGCCTGTTaGCATAATTATAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: CAMGRPRAFVVGPLICVQPCSAC*HNYRSC
Trigger: ACATGACCTATAATTATGCCAACAGGCAGAGCACGG...CTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGACCATATGGGGGCTaGCGTGTGCCATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGGPYGG*RVPWEG
Trigger: GCCTTCCCATGGCACACGCCAGCCCCCATATGGTCC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCTATCCCGCCGAATCATaGGGGGCTGCACAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCYPAES*GAAQGQ
Trigger: CTGCCCCTGTGCAGCCCCCCATGATTCGGCGGGATA...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp CGAGATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCTTCAACAGAGCCAGGTaGGAAGGTGATATCCCGCCG +
Preference number: 4 (lower is better)
Translates to: RDVGECNQGVFPEHLQAVFNRAR*EGDIPP
Trigger: CGGCGGGATATCACCTTCCCACCTGGCTCTGTTGAA...GACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR CCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTACTCTCGAAGTGGGTCTaGATATGCTCAGTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVLSKWV*ICSVVS
Trigger: GGACACCACTGAGCATATCCAGACCCACTTCGAGAG...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCTCTTCTAGTTTAGGACCTAGAAGTTCTTCTTCTTCTTCCCCACCCTCCATGATGCTTCCGAGGGGCTaGTGGGCAGGGTGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSSSLGPRSSSSSSPPSMMLPRG*WAGCVR
Trigger: CCTCACGCACCCTGCCCACCAGCCCCTCGGAAGCAT...CATGGAGGGTGGGGAAGAAGAAGAAGAACTTCTAGGTCCTAAACTAGAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp CCCTCCTGGTCTGTTGTCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAATCTTGATGTTCCGGTaGCTCTGTGCTGGGCTAATG +
Preference number: 4 (lower is better)
Translates to: PSWSVVPGVPSAVVTCFRILMFR*LCAGLM
Trigger: CATTAGCCCAGCACAGAGCCACCGGAACATCAAGAT...TCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp GATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCACACAGACGCAGCGCTTaGCAAGAGAATCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: DVGECNQGVFPEHLQAVPHRRSA*QENPAS
Trigger: ACTGGCAGGATTCTCTTGCCAAGCGCTGCGTCTGTG...TGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGGTTCTCGTCCACCTTaGCCAAGGCAAGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGGSRPP*PRQAAR
Trigger: GCGCGCTGCTTGCCTTGGCCAAGGTGGACGAGAACC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp GAGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGATCCATTGGACTGGATaGCTACAAAATAAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: EGPYGGWRVPWEGHEPSWIHWTG*LQNKEH
Trigger: ATGCTCTTTATTTTGTAGCCATCCAGTCCAATGGAT...CCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTACCCGGCTGGGGGCAGTaGGTCCTCCCTTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLPGWGQ*VLPSVE
Trigger: CTCCACCGAAGGGAGGACCCACTGCCCCCAGCCGGG...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000430799.7
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTCCTCATGCCTGGCAATaGGGGGATCTGACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSPHAWQ*GDLTVW
Trigger: CCACACAGTCAGATCCCCCCATTGCCAGGCATGAGG...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636219.1
CDS-3UTR TCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTCGCCGGGCGGCTCCGTaGGGTTATTGTTCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIRRAAP*GYCSGR
Trigger: CCGCCCTGAACAATAACCTCACGGAGCCGCCCGGCG...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR TCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGGGAGCCGGGGACTGCTaGTGTGGAGGCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKGAGDC*CGGWDG
Trigger: GCCATCCCAGCCTCCACATCAGCAGTCCCCGGCTCC...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCTGTCCTCCGGAAGGCTaGCGCGGAGATAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCCPPEG*RGDKAE
Trigger: CTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACA...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTGTCCTCCGGAAGGCTaGCGCGGAGATAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGCPPEG*RGDKAE
Trigger: CTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGGCTGTCCATGCATTTaGCCTCCGGCACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKGCPCI*PPAPMG
Trigger: CCCCATGGGTGCCGGAGGTCAAATGCATGGACAGCC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGGGGTCCCTGAGGGTTaGTCATGCCAGCCATACTAT +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLGVPEG*SCQPYY
Trigger: ATAGTATGGCTGGCATGATCAACCCTCAGGGACCCC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTTGGCCTTCTCCTCAGTaGAGGCCAGATAACGGTCCA +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSWPSPQ*RPDNGP
Trigger: TGGACCGTTATCTGGCCTTCACTGAGGAGAAGGCCA...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp GCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGTATTCATACTGGGCTaGTACCCAGGGTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: ATSLRGWPSDLCAAFHLFVFILG*YPGFGV
Trigger: GACTCCAAACCCTGGGTATCAGCCCAGTATGAATAC...GAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAACTGGGTTGGAAGGCATaGGATTCGGCTGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKLGWKA*DSAVGP
Trigger: GGGCCCCACAGCCGAATCTCATGCCTTCCAACCCAG...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAACTGAGCAACCTCAGCTaGTGCCTGTATGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKLSNLS*CLYGAA
Trigger: GGCGGCCCCATACAGGCATCAGCTGAGGTTGCTCAG...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp CCGGTGGCTCTGTGCTGGGCTAATGCCAAATGGAAACTTGCTGCTCTCCTTGATACGCCCAAGCTTATCTaGGCAGTCCACCACAAATGG +
Preference number: 4 (lower is better)
Translates to: PVALCWANAKWKLAALLDTPKLI*AVHHKW
Trigger: CCATTTGTGGTGGACTGCTCAGATAAGCTTGGGCGT...ATCAAGGAGAGCAGCAAGTTTCCATTTGGCATTAGCCCAGCACAGAGCCACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp CGAGATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCGTCCCACGGCTGTCATaGCTGGCCAATCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: RDVGECNQGVFPEHLQAVVPRLS*LANQKQ
Trigger: CTGTTTTTGATTGGCCAGTCATGACAGCCGTGGGAC...GACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACGCCGGCGGCTCAGCTaGTCCCGGCTCTGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHARRRLS*SRLCRL
Trigger: GAGCCTACAGAGCCGGGAGCAGCTGAGCCGCCGGCG...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR GCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTCGCCGCCACCCCCATTaGTCTCGGCCCCGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIRRHPH*SRPRPA
Trigger: TGCAGGACGGGGCCGAGAGCAATGGGGGTGGCGGCG...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR GCA 90 bp AAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGGCTGAGGTCTCATCTTaGCCATCTGATCCATTGGAC +
Preference number: 4 (lower is better)
Translates to: KATSLRGWPSDLCAAFHLAEVSS*PSDPLD
Trigger: GTCCAATGGATCAGATGGGCAAGATGAGACCTCAGC...CAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGACGGAGGTCCCTGTTaGTGCGAGTATGGGTTAGTC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLDGGPC*CEYGLV
Trigger: GACTAACCCATACTCGCAGCAACAGGGACCTCCGTC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGGGTACCCATGTCCTTaGTGCGGTCCTGACGGAGGT +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGGYPCP*CGPDGG
Trigger: ACCTCCGTCAGGACCGCAGCAAGGACATGGGTACCC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGTCATCGGGTACCGCTaGGGGGTCTGGGACCCGTAT +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKVIGYR*GVWDPY
Trigger: ATACGGGTCCCAGACCCCGCAGCGGTACCCGATGAC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCTCTGCGCCCGGCCCTaGATGGTCATCGGGTACCGC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKLCARP*MVIGYR
Trigger: GCGGTACCCGATGACCATGCAGGGCCGGGCGCAGAG...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTCCGCCCATGGCACTCTaGGCCCGGCCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIPPMAL*ARPCMV
Trigger: GACCATGCAGGGCCGGGCGCAGAGTGCCATGGGCGG...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGGGAAGGGCCTCGGATaGCAGGCAGGTGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPGKGLG*QAGEGR
Trigger: CCTCCCCTCACCTGCCTGGCATCCGAGGCCCTTCCC...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGAGGTGGCATCTGGTTaGCTGGCACTGCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKEVASG*LALQQA
Trigger: CGCCTGCTGCAGTGCCAGGCAACCAGATGCCACCTC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp CCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGTGGTTCATGGAAGGATaGATGATGCTGTCCGACTGG +
Preference number: 4 (lower is better)
Translates to: PRAFVVGPLICVQHFICSWFMEG*MMLSDW
Trigger: CCAGTCGGACAGCATCATGCATCCTTCCATGAACCA...CGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGCCTCCAGCCATGCCTaGACTGGGGTAGTTGGCATT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGASSHA*TGVVGI
Trigger: AATGCCAACTACCCCAGTGCAGGCATGGCTGGAGGC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCCACCCATGGGGTTTATaGCTCCAGCCATGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIHPWGL*LQPCLH
Trigger: GTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTCCCTGGAGGGAGTGTaGCATAAGGTGGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGSLEGV*HKVGCQ
Trigger: CTGGCATCCCACCTTATGGCACACTCCCTCCAGGGA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGGCCATAAGGCCGGTTaGCCATGGAGGCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGGHKAG*PWRRDS
Trigger: TGAGTCACGCCTCCATGGGCAACCGGCCTTATGGCC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGGTCTTGGAATCAGCAGCTaGAAAGATGTCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TSLRGWPSDLCAAFHLFGLGISS*KDVWGR
Trigger: CCTCCCCCAGACATCTTTGCAGCTGCTGATTCCAAG...ACCGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGAGTCTGGGGCCCCTaGATAGATCCTGATCCCGCA +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGGVWGP*IDPDPA
Trigger: TGCGGGATCAGGATCTATGCAGGGGCCCCAGACTCC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTCCGCCGTTGGGGCCCTaGCCTGAGGACATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCPPLGP*PEDMKG
Trigger: TCCCTTCATGTCCTCAGGGCAGGGCCCCAACGGCGG...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCTACATCTCCCCTTCGTaGCGCTTGGCAGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCYISPS*RLAGGP
Trigger: TGGCCCTCCTGCCAAGCGGCACGAAGGGGAGATGTA...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCTGCCCCTGCCCAGTaGTGTATGGCACGCTGTACA +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGAAPAQ*CMARCT
Trigger: TGTACAGCGTGCCATACAGCACTGGGCAGGGGCAGC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCGCTGCCCCTGCCCAGTaGTGTATGGCACGCTGTACA +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCAAPAQ*CMARCT
Trigger: TGTACAGCGTGCCATACAGCACTGGGCAGGGGCAGC...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAGTTCTGGGGGCCGCCTaGTGGTCGGCGCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLVLGAA*WSALSS
Trigger: GCTACTGAGCGCCGACCAGCAGGCGGCCCCCAGAAC...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGGTTCTGGGGGCCGCCTaGTGGTCGGCGCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKVLGAA*WSALSS
Trigger: GCTACTGAGCGCCGACCAGCAGGCGGCCCCCAGAAC...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCCCCTGCCACATGGTaGCTTGCTGAGCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGAPATW*LAEQPQ
Trigger: CTGAGGTTGCTCAGCAAGGCACCATGTGGCAGGGGC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTGGGGGACCTGCCTTCTaGATTTTCATCCCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSGGPAF*IFIPEC
Trigger: GCACTCTGGGATGAAAATGCAGAAGGCAGGTCCCCC...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGCATCATTACCCGCCATaGCTCCGGGGTTCCAATGTC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLHHYPP*LRGSNV
Trigger: GACATTGGAACCCCGGAGGCATGGCGGGTAATGATG...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp TCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGAGTGTAACCAAGTATCTAATGCCCATGTaGTCTCTGCCAGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: SGYGDRSNCPEMLASVTKYLMPM*SLPGDQ
Trigger: CTGGTCTCCTGGCAGAGAGCACATGGGCATTAGATA...CTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp GGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGAAGCTGGCTTGTCCTTaGCTGAAAAGGCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: GRQMLSGYGDRSNCPEMLKLACP*LKRLSP
Trigger: AGGAGATAGCCTTTTCAGGCAAGGACAAGCCAGCTT...CAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTACCACTGTCAAACTCCTaGACACGCCCAAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVPLSNS*TRPSLS
Trigger: AGATAAGCTTGGGCGTGTGCAGGAGTTTGACAGTGG...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGCCCTGGTGTACCCTCTaGTGTTGTCACATGCTTCCG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLPWCTL*CCHMLP
Trigger: CGGAAGCATGTGACAACAGCAGAGGGTACACCAGGG...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTCTGGGTGCTTGTGGTaGAGCAGGATCAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGSGCLW*SRISLP
Trigger: GGGCAAGCTGATCCTGCTGCACCACAAGCACCCAGA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp GTCAAGGTGCTAGACCGAGTAGACAACATGTCATCCATAGTGGCTGTGATCCGTACTGCCCTTCTGCACTaGAATGGCACGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VKVLDRVDNMSSIVAVIRTALLH*NGTSCQ
Trigger: CTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT...ACGGATCACAGCCACTATGGATGACATGTTGTCTACTCGGTCTAGCACCTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGGAAGCCCAGGAGGTTaGCGATACTGCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIGSPGG*RYCPSA
Trigger: TGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGGAAGCCCAGGAGGTTaGCGATACTGCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGGSPGG*RYCPSA
Trigger: TGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTACCGCCATGTTGTTGGTaGAAGACGGCGGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLPPCCW*KTAAAA
Trigger: CGCCGCGGCCGCCGTCTTCCACCAACAACATGGCGG...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGCCCATCTGATCCATTaGACTGGATGGCTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLAHLIH*TGWLRG
Trigger: ACCCCTCAGCCATCCAGTCCAATGGATCAGATGGGC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTACCGCTGCGGGGTCTaGGACCCGTATGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTYRCGV*DPYGCP
Trigger: AGGGCAGCCATACGGGTCCCAGACCCCGCAGCGGTA...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTAAGAGAGGCCGCCCATaGCACTCTGCGCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIKRGRP*HSAPGP
Trigger: AGGGCCGGGCGCAGAGTGCCATGGGCGGCCTCTCTT...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCTTGCCCTCCCTTACTaGAGGTCATTGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGLALPY*RSLRGL
Trigger: CAGCCCCCTCAATGACCTCCAGTAAGGGAGGGCAAG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGATAGATCAGGCAAGCTaGAGGGTCTTGACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PRAFVVGPLICVQHFICSIDQAS*RVLTEG
Trigger: GCCTTCAGTCAAGACCCTCCAGCTTGCCTGATCTAT...CGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGGCCGAGGTGGCATCTaGTTGCCTGGCACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKGRGGI*LPGTAA
Trigger: TGCTGCAGTGCCAGGCAACCAGATGCCACCTCGGCC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGACCTCCGGCACCCATaGGGTTTATGCCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGDLRHP*GLCLQP
Trigger: TGGCTGGAGGCATAAACCCCATGGGTGCCGGAGGTC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGCCATGGTTCCACCCATaGAATATGGGGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLPWFHP*NMGVPE
Trigger: CTCAGGGACCCCCATATTCCATGGGTGGAACCATGG...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTCCTTGTTGTTCATTTTaGTGGCTGGAGTTAACTTTA +
Preference number: 4 (lower is better)
Translates to: RDHMGAGVCHGKATSLRGPCCSF*WLELTL
Trigger: TAAAGTTAACTCCAGCCACCAAAATGAACAACAAGG...ACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGCTCATGCCTGGCAATaGGGGGATCTGACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIAHAWQ*GDLTVW
Trigger: CCACACAGTCAGATCCCCCCATTGCCAGGCATGAGC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGGGATAGTGCTGTCGTaGTCCCATCGCCACATTTCC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLGIVLS*SHRHIS
Trigger: GGAAATGTGGCGATGGGACCACGACAGCACTATCCC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR CCA 90 bp GGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATATACATCCCCGAGTCTaGGTTGGAAGGCATGAGATT +
Preference number: 4 (lower is better)
Translates to: GKATSLRGWPSDLCAAFHIHPRV*VGRHEI
Trigger: AATCTCATGCCTTCCAACCCAGACTCGGGGATGTAT...ATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGTACATTGTAGTCTGCTaGCTGGGGAAGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLYIVVC*LGKGLP
Trigger: TGGCAGCCCCTTCCCCAGCCAGCAGACTACAATGTA...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR CCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTAGGCTGGGGCTGGGCTaGGGGCAACTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIRLGLG*GQLLLL
Trigger: CAGCAGCAGCAGTTGCCCCCAGCCCAGCCCCAGCCT...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACTGGGGGCCGCCTGCTaGTCGGCGCTCAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHALGAAC*SALSSS
Trigger: GCTGCTACTGAGCGCCGACCAGCAGGCGGCCCCCAG...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGAATGGAAATTGGTTCTaGGGGCCGCCTGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGNGNWF*GPPAGR
Trigger: CCGACCAGCAGGCGGCCCCCAGAACCAATTTCCATT...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGGTTCGGCCAAACTGGAATaGAAATTGGTTCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TSLRGWPSDLCAAFHLFGSAKLE*KLVLGA
Trigger: GGCCCCCAGAACCAATTTCCATTCCAGTTTGGCCGA...ACCGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGGTGGCATGTTTTGCTaGGCATTGGTGCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGGGMFC*ALVPGG
Trigger: ACCCCCTGGCACCAATGCCCAGCAAAACATGCCACC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGCCGCCCATCATTTGTaGTGGCATGTTTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLAAHHL*WHVLLG
Trigger: GCCCAGCAAAACATGCCACCACAAATGATGGGCGGC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTCAGCTGATGCCTGTATaGGGCCGCCCATCATTTGTG +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSQLMPV*GRPSFV
Trigger: CACAAATGATGGGCGGCCCCATACAGGCATCAGCTG...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTACGAGCCTTCGTGGTTaGCCCTCTGATCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSTSLRG*PSDLCA
Trigger: TGCACACAGATCAGAGGGCCAACCACGAAGGCTCGT...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGAGTGTAACCAAGATTCTGCATGCTTGGTaGGGGCTGGTAGTTAGATGG +
Preference number: 4 (lower is better)
Translates to: SGYGDRSNCPEMLASVTKILHAW*GLVVRW
Trigger: CCATCTAACTACCAGCCCCCACCAAGCATGCAGAAT...CTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR CCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTGGTGCGGTTCTCCATTaGCCGGGGCAGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIGAVLH*PGQGSR
Trigger: CCTGCTCCCCTGCCCCGGCCAATGGAGAACCGCACC...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CCGGTGGCTCTGTGCTGGGCTAATGCCAAATGGAAACTTGCTGCTCTCCTTGATCCGGTGGCTCTGTGCTaGGCTAATGCCAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: PVALCWANAKWKLAALLDPVALC*ANAKWK
Trigger: TTTCCATTTGGCATTAGCCCAGCACAGAGCCACCGG...ATCAAGGAGAGCAGCAAGTTTCCATTTGGCATTAGCCCAGCACAGAGCCACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp GATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCATTGCAGCTCACCCCTTaGTCCTGTTCCTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: DVGECNQGVFPEHLQAVPLQLTP*SCSSSF
Trigger: AAAGGAGGAGGAACAGGACCAAGGGGTGAGCTGCAA...TGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp CCAGGATCCAGTAGCGTTCTCTGTCCTGGGTCACCCACCTCATACTCCTTTAAAGTGGAAAAGGGGTCCTaGGCTTCAGCTGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: PGSSSVLCPGSPTSYSFKVEKGS*ASAEGQ
Trigger: TTGCCCTTCAGCTGAAGCCCAGGACCCCTTTTCCAC...TTTAAAGGAGTATGAGGTGGGTGACCCAGGACAGAGAACGCTACTGGATCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGGAAAGGACGGCATTaGGGCCCAGGGTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGGKGRH*GPGWKR
Trigger: CCTTTTCCACCCTGGGCCCCAATGCCGTCCTTTCCC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp CTGAACCTCCCAGGATCCAGTAGCGTTCTCTGTCCTGGGTCACCCACCTCATACTCCACATTGTTGTCCTaGATGCTGAGTTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LNLPGSSSVLCPGSPTSYSTLLS*MLSLLR
Trigger: CCTCAGCAAACTCAGCATCCAGGACAACAATGTGGA...GTATGAGGTGGGTGACCCAGGACAGAGAACGCTACTGGATCCTGGGAGGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTTCTGCTGGAACTGTGTaGCGGCAAGGCTGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSSAGTV*RQGCPL
Trigger: TAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGA...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTTGGAGGAGGCTGGCCTaGCTCTGCTGGAACTGTGTG +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGWRRLA*LCWNCV
Trigger: CACACAGTTCCAGCAGAGCCAGGCCAGCCTCCTCCA...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACAGCGAGACCCCGGCTaGGGGCAGTGGGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHAQRDPG*GQWVLP
Trigger: AGGGAGGACCCACTGCCCCCAGCCGGGGTCTCGCTG...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430799.7
CDS-3UTR TCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTGGGAGTATGGAGGCTaGGAGGACTGGAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGWEYGG*EDWSCG
Trigger: ACCACAGCTCCAGTCCTCTCAGCCTCCATACTCCCA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp CATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTTTGTTCTTGTTGACCTaGGTCAATCCACCAATCTCC +
Preference number: 4 (lower is better)
Translates to: HGKATSLRGWPSDLCAAFLFLLT*VNPPIS
Trigger: GGAGATTGGTGGATTGACTCAGGTCAACAAGAACAA...AAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR TCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCCCAGGAGACCAGACTTaGGGGACATCATTACCCGCC +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCPGDQT*GTSLPA
Trigger: GGCGGGTAATGATGTCCCTCAAGTCTGGTCTCCTGG...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp GGCAGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGCATACAGCAGGATGTTaGTGGTATCTAATGCCCATG +
Preference number: 4 (lower is better)
Translates to: GRQMLSGYGDRSNCPEMLHTAGC*WYLMPM
Trigger: CATGGGCATTAGATACCATCAACATCCTGCTGTATG...CAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGCTCCTCACTATTCTCTaGAGCTGGCTTGTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLLLTIL*SWLVLA
Trigger: GGCAAGGACAAGCCAGCTTCAGAGAATAGTGAGGAG...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR TCA 90 bp ATTACAGTATGTTTACAGTATCAGGTGTACAGTACAGTACATGAAAGGGTCTACGGTGGGCAGGGTGCGTaGGGCCGGGAAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ITVCLQYQVYSTVHERVYGGQGA*GREGSS
Trigger: GCTGCTGCCTTCCCGGCCTCACGCACCCTGCCCACC...GTAGACCCTTTCATGTACTGTACTGTACACCTGATACTGTAAACATACTGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGCTCCTTGATGGCCTCTaGACTCTTAGCTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLLLDGL*TLSSIL
Trigger: GAGGATGGAGCTAAGAGTTCAGAGGCCATCAAGGAG...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR TCA 90 bp TCCTGGTCTGTTGTCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGGGATTGCCTGGCACAAATaGCAGGCTTCGAATGGTATT +
Preference number: 4 (lower is better)
Translates to: SWSVVPGVPSAVVTCFRGIAWHK*QASNGI
Trigger: AATACCATTCGAAGCCTGTCATTTGTGCCAGGCAAT...CCCTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGTCCCACGGCTGTCATaGCTGGCCAATCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLVPRLS*LANQKQ
Trigger: CTGTTTTTGATTGGCCAGTCATGACAGCCGTGGGAC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR TCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTCAGAAAGGCGTGAGGTaGTGGAGGGAGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTQKGVR*WREGRW
Trigger: CCACCTCCCCTCCCTCCATCACCTCACGCCTTTCTG...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGAATGTGGCATCCCGTTaGTGCAAGGACTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLNVASR*CKDWES
Trigger: GCTTTCCCAGTCCTTGCATCAACGGGATGCCACATT...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCGGAGGTCCCTGTTGCTaGGAGTATGGGTTAGTCCCG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCGGPCC*EYGLVP
Trigger: CGGGACTAACCCATACTCGCAGCAACAGGGACCTCC...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACTCTGCGCCCGGCCCTaGATGGTCATCGGGTACCGC +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHALCARP*MVIGYR
Trigger: GCGGTACCCGATGACCATGCAGGGCCGGGCGCAGAG...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAGGCTGGCTCTGGGGGTaGTGCTGTGTCGTCGACTGC +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLGWLWG*CCVVDC
Trigger: GCAGTCGACGACACAGCAGCACCCCCAGAGCCAGCC...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTAAGGTTCATATCTTCTTaGCCTCCCTTACTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVRFISS*PPLLEV
Trigger: GACCTCCAGTAAGGGAGGGCAAGAAGATATGAACCT...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTGGGAAGGGCCTCGGATaGCAGGCAGGTGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIGKGLG*QAGEGR
Trigger: CCTCCCCTCACCTGCCTGGCATCCGAGGCCCTTCCC...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTCTGGTTGCCTGGCACTaGAGCAGGCGAGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCLVAWH*SRREWS
Trigger: GGACCACTCTCGCCTGCTGCAGTGCCAGGCAACCAG...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCACCGCCGTTGGGGCCCTaGCCTGAGGACATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPPPLGP*PEDMKG
Trigger: TCCCTTCATGTCCTCAGGGCAGGGCCCCAACGGCGG...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGCTGCCAGAAGGGGTaGCTTGGGTGGAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGGCQKG*LGWRTD
Trigger: ATCAGTTCTCCACCCAAGGCACCCCTTCTGGCAGCC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCCAGGAGGGCCATATGTaGCATCCATTGGCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIQEGHM*HPLAAC
Trigger: ACAAGCGGCCAATGGATGGCACATATGGCCCTCCTG...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCAGGAGGGCCATATGTaGCATCCATTGGCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGQEGHM*HPLAAC
Trigger: ACAAGCGGCCAATGGATGGCACATATGGCCCTCCTG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTGGCTGGGCAGCTTGTTaGTGGCTGGCAGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIGWAAC*WLAGWG
Trigger: GCCCCAGCCTGCCAGCCAGCAACAAGCTGCCCAGCC...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTATTGGTGCCAGGGGGTaGAGAGACACGGTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCIGARG*RDTVSA
Trigger: GGCCGAGACCGTGTCTCTGCACCCCCTGGCACCAAT...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTATTGGTGCCAGGGGGTaGAGAGACACGGTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTIGARG*RDTVSA
Trigger: GGCCGAGACCGTGTCTCTGCACCCCCTGGCACCAAT...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGATGGGGGCTGGCGTGTaGCATGGGAAGGCCACGAGC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKMGAGV*HGKATS
Trigger: GCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCAT...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTGGGGCAGGTGCTATGTaGGAGGCAGGTACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTGAGAM*EAGTGG
Trigger: TCCCCCAGTACCTGCCTCGCACATAGCACCTGCCCC...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGTGAGCCGCCTCCTCTaGTTCAACACAGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGVSRLL*FNTGCV
Trigger: CACACAGCCTGTGTTGAAGCAGAGGAGGCGGCTCAC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCATCATTACCCGCCATaGCTCCGGGGTTCCAATGTC +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGHHYPP*LRGSNV
Trigger: GACATTGGAACCCCGGAGGCATGGCGGGTAATGATG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp TCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGGGGCTGGTGGGCAGGCATACTCCTTTAAAATaGCAAAGATCTCAATCAGGC +
Preference number: 4 (lower is better)
Translates to: SLVYPLLLSHASEGLVGRHTPLK*QRSQSG
Trigger: GCCTGATTGAGATCTTTGGCATTTTAAAGGAGTATG...CCTGCCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTCCACCAATCCGCCAGTaGAGCAGGCCACTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGPPIRQ*SRPLSN
Trigger: GTTTGACAGTGGCCTGCTGCACTGGCGGATTGGTGG...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTCTGCTGTTGTCACATaGTTCCGAGGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGSAVVT*FRGAGG
Trigger: CCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGGAGATAGGTCCAACTaGCCCGAGATGTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIGDRSN*PEMLAS
Trigger: ACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTACTGCCCTTCTGCACTaGAATGGCACGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGTALLH*NGTSCQ
Trigger: CTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGGGTCTACACTCTACTaGACAGGCCTCTCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLGSTLY*TGLSSE
Trigger: TTCACTGGAGAGGCCTGTGCAGTAGAGTGTAGACCC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATGCTCCCGGGGCTCATaGGCGCGTGGTGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPCSRGS*ARGGSF
Trigger: AAAGGAGCCACCACGCGCCCATGAGCCCCGGGAGCA...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGTTGACCATACCCGCTaGGGCCTTGTTGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLVDHTR*GLVVHK
Trigger: CTTATGGACAACAAGGCCCCAGCGGGTATGGTCAAC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp GCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCTTGCTGGTTGTAATATaGAGTCTGGCCCTGTTGACC +
Preference number: 4 (lower is better)
Translates to: ATSLRGWPSDLCAAFHLFLLVVI*SLALLT
Trigger: GGTCAACAGGGCCAGACTCCATATTACAACCAGCAA...GAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGAAGGCTGAGCCGGGCTaGGGGGAACTGTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKKAEPG*GELYWG
Trigger: GCCCCAGTACAGTTCCCCCCAGCCCGGCTCAGCCTT...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCCAGCCATGCCTGCACTaGGGTAGTTGGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCQPCLH*GSWHWA
Trigger: TGCCCAATGCCAACTACCCCAGTGCAGGCATGGCTG...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGTGACTCATCCTCCCTaGAGGGAGTGTGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIVTHPP*RECAIR
Trigger: CCTTATGGCACACTCCCTCCAGGGAGGATGAGTCAC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGTCCCTGCAGAATTGTTaGCCATGGTTCCACCCATGG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLSLQNC*PWFHPW
Trigger: CCATGGGTGGAACCATGGCCAACAATTCTGCAGGGA...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGGGACCATATGGGGGCTGGCGTGTGCCATGGGAAGGCCACGAGCCTTCGTGGTTGTTGTTCATTTTGGTaGCTGGAGTTAACTTTACAT +
Preference number: 4 (lower is better)
Translates to: RDHMGAGVCHGKATSLRGCCSFW*LELTLH
Trigger: ATGTAAAGTTAACTCCAGCCACCAAAATGAACAACA...ACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCTCCTCCTTCTGCCATaGAACTGCTGGTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGLLLLP*NCWLTG
Trigger: CCCAGTCAACCAGCAGTTCCATGGCAGAAGGAGGAG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CATGGGAAGGCCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTATAAGGATCCTTATTTaGCTCATAGGACATGCGCCC +
Preference number: 4 (lower is better)
Translates to: HGKATSLRGWPSDLCAAFIRILI*LIGHAP
Trigger: GGGCGCATGTCCTATGAGCCAAATAAGGATCCTTAT...AAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR CCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGGGATAGTGCTGTCGTaGTCCCATCGCCACATTTCC +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIGIVLS*SHRHIS
Trigger: GGAAATGTGGCGATGGGACCACGACAGCACTATCCC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGTGGGCAGCTTGTTGCTaGCTGGCAGGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKWAACC*LAGWGW
Trigger: CCAGCCCCAGCCTGCCAGCCAGCAACAAGCTGCCCA...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTGGGCAGCTTGTTGCTaGCTGGCAGGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIWAACC*LAGWGW
Trigger: CCAGCCCCAGCCTGCCAGCCAGCAACAAGCTGCCCA...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTTCGGCCAAACTGGAATaGAAATTGGTTCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSSAKLE*KLVLGA
Trigger: GGCCCCCAGAACCAATTTCCATTCCAGTTTGGCCGA...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTGGTGCGGTTCTCCATTaGCCGGGGCAGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIGAVLH*PGQGSR
Trigger: CCTGCTCCCCTGCCCCGGCCAATGGAGAACCGCACC...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTACCCTCCATGGGAGCTaGACTAGACACCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSTLHGS*TRHLAE
Trigger: TTCAGCAAGGTGTCTAGTCCAGCTCCCATGGAGGGT...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AGGGTTTCCAAGACCAGTCTCTGCGGGGAAAGGACGGCATTGGGGCCCAGGGTGCTGTACGATCTTTACTaGAAGCTTGTCAAACTTACT +
Preference number: 4 (lower is better)
Translates to: RVSKTSLCGERTALGPRVLYDLY*KLVKLT
Trigger: AGTAAGTTTGACAAGCTTCCAGTAAAGATCGTACAG...CACCCTGGGCCCCAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGAAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp CTGAGGGTTTCCAAGACCAGTCTCTGCGGGGAAAGGACGGCATTGGGGCCCAGGCTGTACGATCTTTACTaGAAGCTTGTCAAACTTACT +
Preference number: 4 (lower is better)
Translates to: LRVSKTSLCGERTALGPRLYDLY*KLVKLT
Trigger: AGTAAGTTTGACAAGCTTCCAGTAAAGATCGTACAG...CCTGGGCCCCAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGAAACCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTATGCTTCCGAGGGGCTaGTGGGCAGGGTGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIMLPRG*WAGCVR
Trigger: CCTCACGCACCCTGCCCACCAGCCCCTCGGAAGCAT...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTGGAGGTCCATCAGGTaGGGGCCCCTCCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTWRSIR*GPLLVC
Trigger: ACAGACCAGGAGGGGCCCCCACCTGATGGACCTCCA...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TCTAGGAAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGATGGGCTAATGCCAAATaGAAACTTGCTGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SRKPRRLPILPFCTAMARWANAK*KLAALL
Trigger: AAGGAGAGCAGCAAGTTTCCATTTGGCATTAGCCCA...TCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp ATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCACGTCTCATCCTTACTGTaGGGTTCGTCCTCTAGGATC +
Preference number: 4 (lower is better)
Translates to: MLASVTKVFSRSISKQSHVSSLL*GSSSRI
Trigger: GATCCTAGAGGACGAACCCCACAGTAAGGATGAGAC...GTGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTTTGCAGCTCACCCCTTaGTCCTGTTCCTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSLQLTP*SCSSSF
Trigger: AAAGGAGGAGGAACAGGACCAAGGGGTGAGCTGCAA...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGGGAAAGGACGGCATTaGGGCCCAGGGTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKGKGRH*GPGWKR
Trigger: CCTTTTCCACCCTGGGCCCCAATGCCGTCCTTTCCC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGAGTGTAACCAAGTCCACATTGTTGTCCTaGATGCTGAGTTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SGYGDRSNCPEMLASVTKSTLLS*MLSLLR
Trigger: CCTCAGCAAACTCAGCATCCAGGACAACAATGTGGA...CTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp AATGAGTTCATCAACGGTGATACCGAGATGTCCAACAGCCGTGATTCGTACAGAGCATGTGGAGGAGGCTaGCCTGGCTCTGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: NEFINGDTEMSNSRDSYRACGGG*PGSAGT
Trigger: AGTTCCAGCAGAGCCAGGCCAGCCTCCTCCACATGC...TCTGTACGAATCACGGCTGTTGGACATCTCGGTATCACCGTTGATGAACTCATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTACAGCACAGGGTAAACTaGATTCTGAGGTGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVQHRVN*ILRWFC
Trigger: GCAAAACCACCTCAGAATCCAGTTTACCCTGTGCTG...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCCTCATGCCTGGCAATaGGGGGATCTGACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGPHAWQ*GDLTVW
Trigger: CCACACAGTCAGATCCCCCCATTGCCAGGCATGAGG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCCTCATCTTGCCCATCTaGTCCATTGGACTGGATGGC +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDILILPI*SIGLDG
Trigger: GCCATCCAGTCCAATGGATCAGATGGGCAAGATGAG...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR TCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGTCCCGCCATATGGCTaGGGTCTCATCTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKVPPYG*GLILPI
Trigger: GATGGGCAAGATGAGACCTCAGCCATATGGCGGGAC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTCCTTGCTGCGGTCCTaGCGGAGGTCCCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAISLLRS*RRSLLL
Trigger: CAGCAACAGGGACCTCCGTCAGGACCGCAGCAAGGA...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTGACCCAAATGAATCTTaGGATAGCTCCTGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSDPNES*DSSCGG
Trigger: TCCACCGCAGGAGCTATCTCAAGATTCATTTGGGTC...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTGCCCATGGAGGCGTaGCTCATCCTCCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAILPMEA*LILPGG
Trigger: CCCTCCAGGGAGGATGAGTCACGCCTCCATGGGCAA...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGATCCCTGACCCAACCTaGGGTGGCATATTGGCCATG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGIPDPT*GGILAM
Trigger: CATGGCCAATATGCCACCTCAGGTTGGGTCAGGGAT...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCTGGCAGCACTGCTTaGTGTGCCCACATTGAGGTT +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGAGSTA*CAHIEV
Trigger: AACCTCAATGTGGGCACATCAAGCAGTGCTGCCAGC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTCATGGAACTGCTGGTTaGCTGGGGAGTCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIHGTAG*LGSLGP
Trigger: GGGCCCCAGACTCCCCAGTCAACCAGCAGTTCCATG...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCTGGGTTGGAAGGCATaGGATTCGGCTGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKLGWKA*DSAVGP
Trigger: GGGCCCCACAGCCGAATCTCATGCCTTCCAACCCAG...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR TCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCACTGGGTTGGAAGGCATaGGATTCGGCTGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPLGWKA*DSAVGP
Trigger: GGGCCCCACAGCCGAATCTCATGCCTTCCAACCCAG...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR TCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTACTGAGCAACCTCAGCTaGTGCCTGTATGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLLSNLS*CLYGAA
Trigger: GGCGGCCCCATACAGGCATCAGCTGAGGTTGCTCAG...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AATGAGTTCATCAACGGTGATACCGAGATGTCCAACAGCCGTGATTCGTACAGAAGCCAGGTGGGAAGGTaGTATCCCGCCGAATCATGG +
Preference number: 4 (lower is better)
Translates to: NEFINGDTEMSNSRDSYRSQVGR*YPAESW
Trigger: CCATGATTCGGCGGGATATCACCTTCCCACCTGGCT...TCTGTACGAATCACGGCTGTTGGACATCTCGGTATCACCGTTGATGAACTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR TCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCTCCTCACTATTCTCTaGAGCTGGCTTGTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGLLTIL*SWLVLA
Trigger: GGCAAGGACAAGCCAGCTTCAGAGAATAGTGAGGAG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR TCA 90 bp AGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGGCTTGTCAAACTTACTaGTCAGCTTCTCCTCACTAT +
Preference number: 4 (lower is better)
Translates to: RQMLSGYGDRSNCPEMLAACQTY*SASPHY
Trigger: ATAGTGAGGAGAAGCTGATCAGTAAGTTTGACAAGC...CGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR TCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCTCCTTGATGGCCTCTaGACTCTTAGCTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGLLDGL*TLSSIL
Trigger: GAGGATGGAGCTAAGAGTTCAGAGGCCATCAAGGAG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR TCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGTCCCACGGCTGTCATaGCTGGCCAATCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIVPRLS*LANQKQ
Trigger: CTGTTTTTGATTGGCCAGTCATGACAGCCGTGGGAC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTACTACAGCTTGCTGCTaGCCCAGCGTTTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSTTACC*PSVFCF
Trigger: GAAACAGAAAACGCTGGGTCAGCAGCAAGCTGTAGT...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTGGGACCCGTATGGCTaGCCTGGGTACCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTWDPYG*PGYPCP
Trigger: AGGACATGGGTACCCAGGGCAGCCATACGGGTCCCA...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAGTCATCGGGTACCGCTaGGGGGTCTGGGACCCGTAT +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLVIGYR*GVWDPY
Trigger: ATACGGGTCCCAGACCCCGCAGCGGTACCCGATGAC...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTGGCTCTGGGGGTGCTaGTGTGTCGTCGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIWLWGC*CVVDCW
Trigger: CCAGCAGTCGACGACACAGCAGCACCCCCAGAGCCA...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGTGGCTCTGGGGGTGCTaGTGTGTCGTCGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKWLWGC*CVVDCW
Trigger: CCAGCAGTCGACGACACAGCAGCACCCCCAGAGCCA...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCAGGCTGGCTCTGGGGGTaGTGCTGTGTCGTCGACTGC +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHAGWLWG*CCVVDC
Trigger: GCAGTCGACGACACAGCAGCACCCCCAGAGCCAGCC...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCTCTGCTCTCCTTGGCTaGTGGAAATCCCTGATGTGC +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDISALLG*WKSLMC
Trigger: GCACATCAGGGATTTCCAGCAGCCAAGGAGAGCAGA...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTACTGGTTGCCTGGCACTaGAGCAGGCGAGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLLVAWH*SRREWS
Trigger: GGACCACTCTCGCCTGCTGCAGTGCCAGGCAACCAG...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAGAGGTGGCATCTGGTTaGCTGGCACTGCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLEVASG*LALQQA
Trigger: CGCCTGCTGCAGTGCCAGGCAACCAGATGCCACCTC...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGAGGTGGCATCTGGTTaGCTGGCACTGCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPEVASG*LALQQA
Trigger: CGCCTGCTGCAGTGCCAGGCAACCAGATGCCACCTC...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTGGCCATAAGGCCGGTTaGCCATGGAGGCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTGHKAG*PWRRDS
Trigger: TGAGTCACGCCTCCATGGGCAACCGGCCTTATGGCC...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCTTCTGCCATGGAACTaGTGGTTGACTGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGLLPWN*WLTGES
Trigger: AGACTCCCCAGTCAACCAGCAGTTCCATGGCAGAAG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTGCTGTGGGGCCCCAGTaGTCATGTTTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIAVGPQ*SCFPQA
Trigger: GGCCTGAGGGAAACATGAGCACTGGGGCCCCACAGC...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp CCACGAGCCTTCGTGGTTGGCCCTCTGATCTGTGTGCAGCATTTCATCTGTTCGGGGTGGAGAACTGATTaGCATAGGAATCATGTCGTT +
Preference number: 4 (lower is better)
Translates to: PRAFVVGPLICVQHFICSGWRTD*HRNHVV
Trigger: AACGACATGATTCCTATGGCAATCAGTTCTCCACCC...CGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615191.4
CDS-3UTR GCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGGCTGCCAGAAGGGGTaGCTTGGGTGGAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKGCQKG*LGWRTD
Trigger: ATCAGTTCTCCACCCAAGGCACCCCTTCTGGCAGCC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTGCCCCTGCCACATGGTaGCTTGCTGAGCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCAPATW*LAEQPQ
Trigger: CTGAGGTTGCTCAGCAAGGCACCATGTGGCAGGGGC...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp CCTCCTGGTCTGTTGTCCCTGGTGTACCCTCTGCTGTTGTCACATGCTTCCGAGATTTTCATCCCAGAGTaGAGGAATGGAGACTTGCTA +
Preference number: 4 (lower is better)
Translates to: PPGLLSLVYPLLLSHASEIFIPE*RNGDLL
Trigger: TAGCAAGTCTCCATTCCTGCACTCTGGGATGAAAAT...CTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532781.1
CDS-3UTR GCA 90 bp ACCGGGTTCTTTCGGTCACTGAGGAAGCGCACCATAGTGCTATACAACTTCTCCTATCTAATGCCCATGTaGTCTCTGCCAGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: TGFFRSLRKRTIVLYNFSYLMPM*SLPGDQ
Trigger: CTGGTCTCCTGGCAGAGAGCACATGGGCATTAGATA...GGAGAAGTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCGCAGCAGCTCTGTCTTaGTCTCGAAGTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCAAALS*SRSGSG
Trigger: TCCAGACCCACTTCGAGAGCAAGACAGAGCTGCTGC...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCAGCAGCTCTGTCTTaGTCTCGAAGTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGAAALS*SRSGSG
Trigger: TCCAGACCCACTTCGAGAGCAAGACAGAGCTGCTGC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAATCTGCTGTTGTCACATaGTTCCGAGGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKSAVVT*FRGAGG
Trigger: CCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGA...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTTCCGGTGGCTCTGTaGTGGGCTAATGCCAAATGG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGVPVAL*WANAKW
Trigger: CCATTTGGCATTAGCCCAGCACAGAGCCACCGGAAC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTGCTTCCGTTCTGGGTaGTTGTGGTGCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGCFRSG*LWCSRI
Trigger: GATCCTGCTGCACCACAAGCACCCAGAACGGAAGCA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCTCCAAGACCAGTCTCTaGGGGGAAAGGACGGCATTG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCSKTSL*GERTAL
Trigger: CAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGA...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTCCAAGACCAGTCTCTaGGGGGAAAGGACGGCATTG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGSKTSL*GERTAL
Trigger: CAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATGCAATGGCACGAGCTaGCAGGCTGTCCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLCNGTS*QAVPLS
Trigger: GCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCA...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCCGATACTGCCCTTCTaGACTGCAATGGCACGAGCT +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGPILPF*TAMARA
Trigger: AGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGGAGGTTGCCGATACTaGCCTTCTGCACTGCAATGG +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGGGCRY*PSALQW
Trigger: CCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAAGGCTGGCCTGGCTCTaGTGGAACTGTGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPRLAWL*WNCVAA
Trigger: TGCCGCCACACAGTTCCAGCAGAGCCAGGCCAGCCT...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp AATGAGTTCATCAACGGTGATACCGAGATGTCCAACAGCCGTGATTCGTACAGATCAAAGGGTGGGTTCTaGATGTGGAGGAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: NEFINGDTEMSNSRDSYRSKGGF*MWRRLA
Trigger: GGCCAGCCTCCTCCACATGCAGAACCCACCCTTTGA...TCTGTACGAATCACGGCTGTTGGACATCTCGGTATCACCGTTGATGAACTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATGTCCGCCATGTTGTTaGTGGAAGACGGCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLCPPCC*WKTAAA
Trigger: CGCGGCCGCCGTCTTCCACCAACAACATGGCGGACA...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCAGTTGTACTGGTGGTTaGGGAAGCCGTGGTCGTGAG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCSCTGG*GSRGRE
Trigger: CTCACGACCACGGCTTCCCCAACCACCAGTACAACT...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCGGTAGGCGCTGCGGTTaGGGTAGTAGGAGTTGTACT +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCGRRCG*GSRSCT
Trigger: AGTACAACTCCTACTACCCCAACCGCAGCGCCTACC...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR CCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGGTCTGGGACCCGTATaGCTGCCCTGGGTACCCATG +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPGLGPV*LPWVPM
Trigger: CATGGGTACCCAGGGCAGCCATACGGGTCCCAGACC...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGGGATACGCAGCCTGCTaGGAGAGCGTCGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKGYAAC*ESVEGA
Trigger: AGCACCCTCGACGCTCTCCCAGCAGGCTGCGTATCC...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGATAGATCAGGCAAGCTaGAGGGTCTTGACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLIDQAS*RVLTEG
Trigger: GCCTTCAGTCAAGACCCTCCAGCTTGCCTGATCTAT...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGCTCTCCTTGGCTGCTaGAAATCCCTGATGTGCTCA +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGALLGC*KSLMCS
Trigger: TGAGCACATCAGGGATTTCCAGCAGCCAAGGAGAGC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTTGGCATCTGGTTGCCTaGCACTGCAGCAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCWHLVA*HCSRRE
Trigger: CTCTCGCCTGCTGCAGTGCCAGGCAACCAGATGCCA...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAGGCCGAGGTGGCATCTaGTTGCCTGGCACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLGRGGI*LPGTAA
Trigger: TGCTGCAGTGCCAGGCAACCAGATGCCACCTCGGCC...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGACTGGGTGGCCGAGGTaGCATCTGGTTGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKTGWPR*HLVAWH
Trigger: GTGCCAGGCAACCAGATGCCACCTCGGCCACCCAGT...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATGTCCGACTGGCCACTaGGTGGCCGAGGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPCPTGH*VAEVAS
Trigger: AGATGCCACCTCGGCCACCCAGTGGCCAGTCGGACA...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTAAGGCTGAGCCGGGCTaGGGGGAACTGTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIKAEPG*GELYWG
Trigger: GCCCCAGTACAGTTCCCCCCAGCCCGGCTCAGCCTT...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGAGTGTGCCATAAGGTaGGATGCCAGGCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGECAIR*DARLSM
Trigger: CATGGACAGCCTGGCATCCCACCTTATGGCACACTC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTGACTCATCCTCCCTaGAGGGAGTGTGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGVTHPP*RECAIR
Trigger: CCTTATGGCACACTCCCTCCAGGGAGGATGAGTCAC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTAAGGCCGGTTGCCCATaGAGGCGTGACTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTKAGCP*RRDSSS
Trigger: GGAGGATGAGTCACGCCTCCATGGGCAACCGGCCTT...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCCTGGCGGCCTGTTTTaGATAGAGTTGGCAGCAACA +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGPGGLF*IELAAT
Trigger: TGTTGCTGCCAACTCTATCCAAAACAGGCCGCCAGG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCTCCACCCATGGAATATaGGGGTCCCTGAGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDISTHGI*GSLRVD
Trigger: ATCAACCCTCAGGGACCCCCATATTCCATGGGTGGA...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCCCATGGTTCCACCCATaGAATATGGGGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCPWFHP*NMGVPE
Trigger: CTCAGGGACCCCCATATTCCATGGGTGGAACCATGG...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTTGGGCTGGGACTTCTTaGAATCAGCAGCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSWAGTS*NQQLQR
Trigger: TCTTTGCAGCTGCTGATTCCAAGAAGTCCCAGCCCA...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTGCAGGAGAGGGAGGCTaGATCTTGGGCTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCAGEGG*ILGWDF
Trigger: GAAGTCCCAGCCCAAGATCCAGCCTCCCTCTCCTGC...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGAACTGCTGGTTGACTaGGGAGTCTGGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPELLVD*GVWGPC
Trigger: GCAGGGGCCCCAGACTCCCCAGTCAACCAGCAGTTC...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGGAACTGCTGGTTGACTaGGGAGTCTGGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKELLVD*GVWGPC
Trigger: GCAGGGGCCCCAGACTCCCCAGTCAACCAGCAGTTC...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTAATGGAATTCCGCTTCTaGAATGTGGAGTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVMEFRF*NVESLP
Trigger: TGGAAGTGACTCCACATTCCAGAAGCGGAATTCCAT...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCCATGAGATTCGGCTGTaGGGCCCCAGTGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCHEIRL*GPSAHV
Trigger: AACATGAGCACTGGGGCCCCACAGCCGAATCTCATG...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTACATTGTAGTCTGCTaGCTGGGGAAGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGYIVVC*LGKGLP
Trigger: TGGCAGCCCCTTCCCCAGCCAGCAGACTACAATGTA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGACGAGCCTTCGTGGTTaGCCCTCTGATCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGTSLRG*PSDLCA
Trigger: TGCACACAGATCAGAGGGCCAACCACGAAGGCTCGT...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTGGCTGGCGTGTGCCATaGGAAGGCCACGAGCCTTCG +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIGWRVP*EGHEPS
Trigger: CGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCC...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGGACCATATGGGGGCTaGCGTGTGCCATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPGPYGG*RVPWEG
Trigger: GCCTTCCCATGGCACACGCCAGCCCCCATATGGTCC...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGTATCCCGCCGAATCATaGGGGGCTGCACAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKYPAES*GAAQGQ
Trigger: CTGCCCCTGTGCAGCCCCCCATGATTCGGCGGGATA...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTTCAACAGAGCCAGGTaGGAAGGTGATATCCCGCCG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGFNRAR*EGDIPP
Trigger: CGGCGGGATATCACCTTCCCACCTGGCTCTGTTGAA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTCAACACAGGCTGTGTaGCTTCAACAGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGSTQAV*LQQSQV
Trigger: CACCTGGCTCTGTTGAAGCCACACAGCCTGTGTTGA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp AGGCAAATGCTCTCGGGGTATGGAGATAGGTCCAACTGCCCCGAGATGTTGGCGGCAGTCCACCACAAATaGATCATTCTTCTGTACGAT +
Preference number: 4 (lower is better)
Translates to: RQMLSGYGDRSNCPEMLAAVHHK*IILLYD
Trigger: ATCGTACAGAAGAATGATCCATTTGTGGTGGACTGC...CGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGTGGAGGTCCATCAGGTaGGGGCCCCTCCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKWRSIR*GPLLVC
Trigger: ACAGACCAGGAGGGGCCCCCACCTGATGGACCTCCA...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR CCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCTGTGATCCGTTTTTCTaGAGGTCCATCAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDICDPFF*RSIRWG
Trigger: CCCCCACCTGATGGACCTCCAGAAAAACGGATCACA...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTATCTTGATGTTCCGGTaGCTCTGTGCTGGGCTAATG +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSILMFR*LCAGLM
Trigger: CATTAGCCCAGCACAGAGCCACCGGAACATCAAGAT...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGGCTTCGAATGGTATTaGACACACAGACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIGFEWY*THRRSA
Trigger: AGCGCTGCGTCTGTGTGTCCAATACCATTCGAAGCC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp CCAGGATCCAGTAGCGTTCTCTGTCCTGGGTCACCCACCTCATACTCCTTTAAAGCAGCCCTGGGTGTTTaGACATCTCAAAGTCATTGC +
Preference number: 4 (lower is better)
Translates to: PGSSSVLCPGSPTSYSFKAALGV*TSQSHC
Trigger: GCAATGACTTTGAGATGTCCAAACACCCAGGGCTGC...TTTAAAGGAGTATGAGGTGGGTGACCCAGGACAGAGAACGCTACTGGATCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp CCAGGATCCAGTAGCGTTCTCTGTCCTGGGTCACCCACCTCATACTCCTTTAAACATGTCCACACTAGTTaGCTCAAAGGGTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PGSSSVLCPGSPTSYSFKHVHTS*LKGWVL
Trigger: CAGAACCCACCCTTTGAGCCAACTAGTGTGGACATG...TTTAAAGGAGTATGAGGTGGGTGACCCAGGACAGAGAACGCTACTGGATCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTCATGTCCACACTAGTTaGCTCAAAGGGTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSHVHTS*LKGWVL
Trigger: CAGAACCCACCCTTTGAGCCAACTAGTGTGGACATG...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTCTTTTCAAAGAGGGTaGGGTAGGGTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGSFQRG*GRVLRG
Trigger: TCCCCTCAGGACCCTACCCCACCCTCTTTGAAAAGA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR TCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTTCCTTGCTGCGGTCCTaGCGGAGGTCCCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFISLLRS*RRSLLL
Trigger: CAGCAACAGGGACCTCCGTCAGGACCGCAGCAAGGA...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTTGGGAGTATGGAGGCTaGGAGGACTGGAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCWEYGG*EDWSCG
Trigger: ACCACAGCTCCAGTCCTCTCAGCCTCCATACTCCCA...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGGAGAGAAAGGAGACTaGGCTGGATTACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGGEKGD*AGLLCS
Trigger: AGAGCAGAGTAATCCAGCTCAGTCTCCTTTCTCTCC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTGTCCTCCGGAAGGCTaGCGCGGAGATAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAICPPEG*RGDKAE
Trigger: CTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACA...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTGGCTGTCCATGCATTTaGCCTCCGGCACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIGCPCI*PPAPMG
Trigger: CCCCATGGGTGCCGGAGGTCAAATGCATGGACAGCC...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTTTGCCCATGGAGGCGTaGCTCATCCTCCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFILPMEA*LILPGG
Trigger: CCCTCCAGGGAGGATGAGTCACGCCTCCATGGGCAA...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTGGGGGACACATCCCTaGCCCAACCTGAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIWGTHP*PNLRWH
Trigger: ATGCCACCTCAGGTTGGGTCAGGGATGTGTCCCCCA...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGGGGTCCCTGAGGGTTaGTCATGCCAGCCATACTAT +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKGVPEG*SCQPYY
Trigger: ATAGTATGGCTGGCATGATCAACCCTCAGGGACCCC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTGAATATGGGGGTCCCTaGGGGTTGATCATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCEYGGP*GLIMPA
Trigger: GGCTGGCATGATCAACCCTCAGGGACCCCCATATTC...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTCCCCTGCATAGATCCTaGTCCCGCAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIPLHRS*SRRRGR
Trigger: CCTCCCTCTCCTGCGGGATCAGGATCTATGCAGGGG...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTCATGGAACTGCTGGTTaGCTGGGGAGTCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIHGTAG*LGSLGP
Trigger: GGGCCCCAGACTCCCCAGTCAACCAGCAGTTCCATG...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGTATTCATACTGGGCTaGTACCCAGGGTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIVFILG*YPGFGV
Trigger: GACTCCAAACCCTGGGTATCAGCCCAGTATGAATAC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGTTGGGGCCCTGCCCTaGGGACATGAAGGGATCACT +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPVGALP*GHEGIT
Trigger: AGTGATCCCTTCATGTCCTCAGGGCAGGGCCCCAAC...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR TCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGGTTGGGGCCCTGCCCTaGGGACATGAAGGGATCACT +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKVGALP*GHEGIT
Trigger: AGTGATCCCTTCATGTCCTCAGGGCAGGGCCCCAAC...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR TCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGCCAGGTGGGAAGGTaGTATCCCGCCGAATCATGG +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCSQVGR*YPAESW
Trigger: CCATGATTCGGCGGGATATCACCTTCCCACCTGGCT...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCTCCTCACTATTCTCTaGAGCTGGCTTGTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGLLTIL*SWLVLA
Trigger: GGCAAGGACAAGCCAGCTTCAGAGAATAGTGAGGAG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR TCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTACGCCCAAGCTTATCTaGGCAGTCCACCACAAATGG +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGTPKLI*AVHHKW
Trigger: CCATTTGTGGTGGACTGCTCAGATAAGCTTGGGCGT...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGGTCCTGGGCTTCAGCTaGAGGGCAAACTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKVLGFS*RANCPV
Trigger: CACTGGGCAGTTTGCCCTTCAGCTGAAGCCCAGGAC...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGTACAGAGTAAACTCTaGGTGGTTCTCGTCCACCTT +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLVQSKL*VVLVHL
Trigger: AAGGTGGACGAGAACCACTCAGAGTTTACTCTGTAC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR TCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTCCCACGGCTGTCATaGCTGGCCAATCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGVPRLS*LANQKQ
Trigger: CTGTTTTTGATTGGCCAGTCATGACAGCCGTGGGAC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR TCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACAGAAAGGCGTGAGGTaGTGGAGGGAGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHAQKGVR*WREGRW
Trigger: CCACCTCCCCTCCCTCCATCACCTCACGCCTTTCTG...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR TCA 90 bp TTTCATAAGTTAGTGGTGCCTGCTTCCGTTCTGGGTGCTTGTGGTGCAGCAGGATCCTGCTGTTGCTGTTaGTACATTGTAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FHKLVVPASVLGACGAAGSCCCC*YIVVCW
Trigger: CCAGCAGACTACAATGTATCAACAGCAACAGCAGGA...TCCTGCTGCACCACAAGCACCCAGAACGGAAGCAGGCACCACTAACTTATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466382.2
CDS-3UTR GCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTCCTCCCGCTGCTGCTaGTCGGCTTTCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAISSRCC*SAFFSS
Trigger: GGAGCTGAAGAAAGCCGAGCAGCAGCAGCGGGAGGA...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324856.13
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGCTGAGGTCTCATCTTaGCCATCTGATCCATTGGAC +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIAEVSS*PSDPLD
Trigger: GTCCAATGGATCAGATGGGCAAGATGAGACCTCAGC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTACCCATGTCCTTGCTaGGGTCCTGACGGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIYPCPC*GPDGGP
Trigger: GGGACCTCCGTCAGGACCGCAGCAAGGACATGGGTA...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp ATTACAGTATGTTTACAGTATCAGGTGTACAGTACAGTACATGAAAGGGTCTACCTCTGCGCCCGGCCCTaGATGGTCATCGGGTACCGC +
Preference number: 4 (lower is better)
Translates to: ITVCLQYQVYSTVHERVYLCARP*MVIGYR
Trigger: GCGGTACCCGATGACCATGCAGGGCCGGGCGCAGAG...GTAGACCCTTTCATGTACTGTACTGTACACCTGATACTGTAAACATACTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTAGGTTCATATCTTCTTaGCCTCCCTTACTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSRFISS*PPLLEV
Trigger: GACCTCCAGTAAGGGAGGGCAAGAAGATATGAACCT...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCTCTGCTCTCCTTGGCTaGTGGAAATCCCTGATGTGC +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCSALLG*WKSLMC
Trigger: GCACATCAGGGATTTCCAGCAGCCAAGGAGAGCAGA...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGCTGGTAGGAGCCCATaGCTGTGTGTATCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKAGRSP*LCVSVL
Trigger: GAGGACAGATACACACAGGCATGGGCTCCTACCAGC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTGCCATAAGGTGGGATaGCAGGCTGTCCATGCATTT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGCHKVG*QAVHAF
Trigger: AAATGCATGGACAGCCTGGCATCCCACCTTATGGCA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCTGCCATAAGGTGGGATaGCAGGCTGTCCATGCATTT +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDICHKVG*QAVHAF
Trigger: AAATGCATGGACAGCCTGGCATCCCACCTTATGGCA...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AGCAAGGACTTTTTACAGAGACCTGTACAGCATCGCACCAAGAGGGGCGATATCGAGTTGGCAGCAACATaGATGGCGACAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SKDFLQRPVQHRTKRGDIELAAT*MATAVS
Trigger: AGAAACTGCTGTCGCCATGCATGTTGCTGCCAACTC...GATATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCATCTCTGGGCTGGCTaGCATCCCTGCAGAATTGTT +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGHLWAG*HPCRIV
Trigger: AACAATTCTGCAGGGATGGCAGCCAGCCCAGAGATG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAGGAGTCTGGGGCCCCTaGATAGATCCTGATCCCGCA +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLGVWGP*IDPDPA
Trigger: TGCGGGATCAGGATCTATGCAGGGGCCCCAGACTCC...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATACATCTCCCCTTCGTaGCGCTTGGCAGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPYISPS*RLAGGP
Trigger: TGGCCCTCCTGCCAAGCGGCACGAAGGGGAGATGTA...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp ATTACAGTATGTTTACAGTATCAGGTGTACAGTACAGTACATGAAAGGGTCTACGTTCTGGGGGCCGCCTaGTGGTCGGCGCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: ITVCLQYQVYSTVHERVYVLGAA*WSALSS
Trigger: GCTACTGAGCGCCGACCAGCAGGCGGCCCCCAGAAC...GTAGACCCTTTCATGTACTGTACTGTACACCTGATACTGTAAACATACTGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTTTTGCTGGGCATTGGTaGCAGGGGGTGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCFAGHW*QGVQRH
Trigger: GTGTCTCTGCACCCCCTGGCACCAATGCCCAGCAAA...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTATCTAATGCCCATGTaGTCTCTGCCAGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGYLMPM*SLPGDQ
Trigger: CTGGTCTCCTGGCAGAGAGCACATGGGCATTAGATA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGAAGCTGGCTTGTCCTTaGCTGAAAAGGCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLKLACP*LKRLSP
Trigger: AGGAGATAGCCTTTTCAGGCAAGGACAAGCCAGCTT...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCCACTGTCAAACTCCTaGACACGCCCAAGCTTATCT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGPLSNS*TRPSLS
Trigger: AGATAAGCTTGGGCGTGTGCAGGAGTTTGACAGTGG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGTTCCGGTGGCTCTGTaGTGGGCTAATGCCAAATGG +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKVPVAL*WANAKW
Trigger: CCATTTGGCATTAGCCCAGCACAGAGCCACCGGAAC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ATGTTGGCGAGTGTAACCAAGGTGTTTTCCCGGAGCATCTCCAAGCAGTCCCACACATCTCAAAGTCATTaGCTGGCACAAATGACAGGC +
Preference number: 4 (lower is better)
Translates to: MLASVTKVFSRSISKQSHTSQSH*LAQMTG
Trigger: GCCTGTCATTTGTGCCAGGCAATGACTTTGAGATGT...GTGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp AATGAGTTCATCAACGGTGATACCGAGATGTCCAACAGCCGTGATTCGTACAGAGGAGATAGGTCCAACTaGCCCGAGATGTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: NEFINGDTEMSNSRDSYRGDRSN*PEMLAS
Trigger: ACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCC...TCTGTACGAATCACGGCTGTTGGACATCTCGGTATCACCGTTGATGAACTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp TCCTCTTCTAGTTTAGGACCTAGAAGTTCTTCTTCTTCTTCCCCACCCTCCATGGGAGATAGGTCCAACTaGCCCGAGATGTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: SSSSLGPRSSSSSSPPSMGDRSN*PEMLAS
Trigger: ACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCC...CATGGAGGGTGGGGAAGAAGAAGAAGAACTTCTAGGTCCTAAACTAGAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGGACAGGCAGGCAAATaGTCTCGGGGTATGGAGATA +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGGQAGK*SRGMEI
Trigger: TATCTCCATACCCCGAGAGCATTTGCCTGCCTGTCC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCATGCAATGGCACGAGCTaGCAGGCTGTCCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHACNGTS*QAVPLS
Trigger: GCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCA...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTAGGCTGGCCTGGCTCTaGTGGAACTGTGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIRLAWL*WNCVAA
Trigger: TGCCGCCACACAGTTCCAGCAGAGCCAGGCCAGCCT...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR CCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGTTAGTCCCGCCATATaGCTGAGGTCTCATCTTGCC +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGVSPAI*LRSHLA
Trigger: GGCAAGATGAGACCTCAGCCATATGGCGGGACTAAC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTCTGTTGCTGCGAGTATaGGTTAGTCCCGCCATATGG +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGLLLRV*VSPAIW
Trigger: CCATATGGCGGGACTAACCCATACTCGCAGCAACAG...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCCGTATGGCTGCCCTaGGTACCCATGTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKPVWLP*VPMSLL
Trigger: CAGCAAGGACATGGGTACCCAGGGCAGCCATACGGG...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTACCCGTATGGCTGCCCTaGGTACCCATGTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLPVWLP*VPMSLL
Trigger: CAGCAAGGACATGGGTACCCAGGGCAGCCATACGGG...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCAGGTCTGGGACCCGTATaGCTGCCCTGGGTACCCATG +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHAGLGPV*LPWVPM
Trigger: CATGGGTACCCAGGGCAGCCATACGGGTCCCAGACC...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCTGGTGGTTGAGACTGTaGCTGCTGCTGATACGAAGG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCWWLRL*LLLIRR
Trigger: CCTTCGTATCAGCAGCAGCCACAGTCTCAACCACCA...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCATGTGTCGTCGACTGCTaGGAGGGGTATGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHACVVDC*EGYGAG
Trigger: CCCGGCTCCATACCCCTCCCAGCAGTCGACGACACA...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCAGGATACGCAGCCTGCTaGGAGAGCGTCGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHAGYAAC*ESVEGA
Trigger: AGCACCCTCGACGCTCTCCCAGCAGGCTGCGTATCC...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAGAGACTGAGCAACACTaGCGGGAGAGCCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLETEQH*RESQQG
Trigger: CCCCTGTTGGCTCTCCCGCCAGTGTTGCTCAGTCTC...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGGAGACTGAGCAACACTaGCGGGAGAGCCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKETEQH*RESQQG
Trigger: CCCCTGTTGGCTCTCCCGCCAGTGTTGCTCAGTCTC...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGTGGCATCTGGTTGCCTaGCACTGCAGCAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKWHLVA*HCSRRE
Trigger: CTCTCGCCTGCTGCAGTGCCAGGCAACCAGATGCCA...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCAACTGGGTGGCCGAGGTaGCATCTGGTTGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHATGWPR*HLVAWH
Trigger: GTGCCAGGCAACCAGATGCCACCTCGGCCACCCAGT...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACGACTGGCCACTGGGTaGCCGAGGTGGCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHARLATG*PRWHLV
Trigger: AACCAGATGCCACCTCGGCCACCCAGTGGCCAGTCG...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCATGTCCGACTGGCCACTaGGTGGCCGAGGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHACPTGH*VAEVAS
Trigger: AGATGCCACCTCGGCCACCCAGTGGCCAGTCGGACA...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAATGATGCTGTCCGACTaGCCACTGGGTGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLMMLSD*PLGGRG
Trigger: ACCTCGGCCACCCAGTGGCCAGTCGGACAGCATCAT...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTCAGCCATGCCTGCACTaGGGTAGTTGGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTQPCLH*GSWHWA
Trigger: TGCCCAATGCCAACTACCCCAGTGCAGGCATGGCTG...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAAAGGCCGGTTGCCCATaGAGGCGTGACTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPKAGCP*RRDSSS
Trigger: GGAGGATGAGTCACGCCTCCATGGGCAACCGGCCTT...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTGCGACAGCAGTTTCTTaGGTTTTCCGGTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGATAVS*VFRFMP
Trigger: GGGCATGAACCGGAAAACCCAAGAAACTGCTGTCGC...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCTGGCAGCAACATGCATaGCGACAGCAGTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCWQQHA*RQQFLG
Trigger: CCCAAGAAACTGCTGTCGCCATGCATGTTGCTGCCA...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAACCCCTTGATTCATATTaGGGTAGCCTGGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKPLDSY*GSLAAC
Trigger: ACAGGCCGCCAGGCTACCCCAATATGAATCAAGGGG...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGCTGGATCTTGGGCTaGGACTTCTTGGAATCAGCA +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGGWILG*DFLESA
Trigger: TGCTGATTCCAAGAAGTCCCAGCCCAAGATCCAGCC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGGCAGGAGAGGGAGGCTaGATCTTGGGCTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKAGEGG*ILGWDF
Trigger: GAAGTCCCAGCCCAAGATCCAGCCTCCCTCTCCTGC...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAGCAGGAGAGGGAGGCTaGATCTTGGGCTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLAGEGG*ILGWDF
Trigger: GAAGTCCCAGCCCAAGATCCAGCCTCCCTCTCCTGC...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCAGAACTGCTGGTTGACTaGGGAGTCTGGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHAELLVD*GVWGPC
Trigger: GCAGGGGCCCCAGACTCCCCAGTCAACCAGCAGTTC...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTCTGACTGTGTGGTGTaGATGCTGGAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGSDCVV*MLELVA
Trigger: AGCCACCAACTCCAGCATCCACACCACACAGTCAGA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTATCATTAAAGGCATCCTaGATCCCAACTGAATTGCTC +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVSLKAS*IPTELL
Trigger: GAGCAATTCAGTTGGGATCCAGGATGCCTTTAATGA...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGCAGAGGTATTCATACTaGGCTGATACCCAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLQRYSY*ADTQGL
Trigger: CAAACCCTGGGTATCAGCCCAGTATGAATACCTCTG...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTCTGCCCAGTGCTGTATaGCACGCTGTACATCTCCCC +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCLPSAV*HAVHLP
Trigger: GGGGAGATGTACAGCGTGCCATACAGCACTGGGCAG...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCCCCAGAGTGCAGGAATaGAGACTTGCTAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCPRVQE*RLARRG
Trigger: ACCTCTCCTAGCAAGTCTCCATTCCTGCACTCTGGG...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCTCTCGAAGTGGGTCTaGATATGCTCAGTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGLSKWV*ICSVVS
Trigger: GGACACCACTGAGCATATCCAGACCCACTTCGAGAG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCAGGTGGGGGCCCCTCCTaGTCTGTTGTCCCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHAGGGPS*SVVPGV
Trigger: TACACCAGGGACAACAGACCAGGAGGGGCCCCCACC...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTTGTGATCCGTTTTTCTaGAGGTCCATCAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGCDPFF*RSIRWG
Trigger: CCCCCACCTGATGGACCTCCAGAAAAACGGATCACA...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGATCTTGATGTTCCGGTaGCTCTGTGCTGGGCTAATG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGILMFR*LCAGLM
Trigger: CATTAGCCCAGCACAGAGCCACCGGAACATCAAGAT...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCGGCTTCGAATGGTATTaGACACACAGACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCGFEWY*THRRSA
Trigger: AGCGCTGCGTCTGTGTGTCCAATACCATTCGAAGCC...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGCTTCGAATGGTATTaGACACACAGACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGGFEWY*THRRSA
Trigger: AGCGCTGCGTCTGTGTGTCCAATACCATTCGAAGCC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCTTGCAGCTCACCCCTTaGTCCTGTTCCTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCLQLTP*SCSSSF
Trigger: AAAGGAGGAGGAACAGGACCAAGGGGTGAGCTGCAA...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGGGAAAGGACGGCATTaGGGCCCAGGGTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPGKGRH*GPGWKR
Trigger: CCTTTTCCACCCTGGGCCCCAATGCCGTCCTTTCCC...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGGGGAAAGGACGGCATTaGGGCCCAGGGTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKGKGRH*GPGWKR
Trigger: CCTTTTCCACCCTGGGCCCCAATGCCGTCCTTTCCC...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGTCCACATTGTTGTCCTaGATGCTGAGTTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLSTLLS*MLSLLR
Trigger: CCTCAGCAAACTCAGCATCCAGGACAACAATGTGGA...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTGGAGGAGGCTGGCCTaGCTCTGCTGGAACTGTGTG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIWRRLA*LCWNCV
Trigger: CACACAGTTCCAGCAGAGCCAGGCCAGCCTCCTCCA...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR CCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGCATGTGGAGGAGGCTaGCCTGGCTCTGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPACGGG*PGSAGT
Trigger: AGTTCCAGCAGAGCCAGGCCAGCCTCCTCCACATGC...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGAGTTGGCTCAAAGGGTaGGTTCTGCATGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGSWLKG*VLHVEE
Trigger: CTCCTCCACATGCAGAACCCACCCTTTGAGCCAACT...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCAGGTTCTCGTCCACCTTaGCCAAGGCAAGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHAGSRPP*PRQAAR
Trigger: GCGCGCTGCTTGCCTTGGCCAAGGTGGACGAGAACC...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGCAGCACAGGGTAAACTaGATTCTGAGGTGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLQHRVN*ILRWFC
Trigger: GCAAAACCACCTCAGAATCCAGTTTACCCTGTGCTG...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTCCCAAGGGAGAAGCTaGACAGCACAGGGTAAACTG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGSQGRS*TAQGKL
Trigger: CAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTCTTTTCAAAGAGGGTaGGGTAGGGTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGSFQRG*GRVLRG
Trigger: TCCCCTCAGGACCCTACCCCACCCTCTTTGAAAAGA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR CCA 90 bp GGGGTAGCTGGGAGGAGGACCAAACTGTGGGGATCCAAGGGTATGTGCAATGTAAACAGTTATGAAATGTaGCATCCCGTTGATGCAAGG +
Preference number: 4 (lower is better)
Translates to: GVAGRRTKLWGSKGMCNVNSYEM*HPVDAR
Trigger: CCTTGCATCAACGGGATGCCACATTTCATAACTGTT...TACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTCTGATCCATTGGACTaGATGGCTGGGTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGSDPLD*MAGLEE
Trigger: CTCCTCCAACCCAGCCATCCAGTCCAATGGATCAGA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430799.7
CDS-3UTR TCA 90 bp TGGTTTTGCATAAATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCATACGAAGGTTGGGCATaGGGGGTCTGGGACGGTGGT +
Preference number: 4 (lower is better)
Translates to: WFCINKGQQSVSKFSTHAYEGWA*GVWDGG
Trigger: ACCACCGTCCCAGACCCCTCATGCCCAACCTTCGTA...TGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGACCCAAATGAATCTTaGGATAGCTCCTGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGDPNES*DSSCGG
Trigger: TCCACCGCAGGAGCTATCTCAAGATTCATTTGGGTC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCGGAGAGAAAGGAGACTaGGCTGGATTACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCGEKGD*AGLLCS
Trigger: AGAGCAGAGTAATCCAGCTCAGTCTCCTTTCTCTCC...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAAGGCGAGAGTGGTCCTaGGCGAGACTGAGCAACACT +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLRREWS*ARLSNT
Trigger: AGTGTTGCTCAGTCTCGCTCAGGACCACTCTCGCCT...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGAATATGGGGGTCCCTaGGGGTTGATCATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPEYGGP*GLIMPA
Trigger: GGCTGGCATGATCAACCCTCAGGGACCCCCATATTC...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGTTGTTCTTGTTGACCTaGGTCAATCCACCAATCTCC +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLLFLLT*VNPPIS
Trigger: GGAGATTGGTGGATTGACTCAGGTCAACAAGAACAA...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCTTGATGTGCCCACATTaGGGTTGGTTGCAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCLMCPH*GWLQVP
Trigger: GGGAACTTGCAACCAACCTCAATGTGGGCACATCAA...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGTTCTGCTGTTGCTGTTaGTACATTGTAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLFCCCC*YIVVCW
Trigger: CCAGCAGACTACAATGTATCAACAGCAACAGCAGAA...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCACATGGTGCCTTGCTaGGCAACCTCAGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKHMVPC*ATSADA
Trigger: GGCATCAGCTGAGGTTGCTCAGCAAGGCACCATGTG...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCACACATGGTGCCTTGCTaGGCAACCTCAGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPHMVPC*ATSADA
Trigger: GGCATCAGCTGAGGTTGCTCAGCAAGGCACCATGTG...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR TCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTCAATGTCTTTCATTGTaGGCCGCCTCCTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGQCLSL*AASSAS
Trigger: TGAAGCAGAGGAGGCGGCTCACAATGAAAGACATTG...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR TCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGGAGACCAGACTTaGGGGACATCATTACCCGCC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKPGDQT*GTSLPA
Trigger: GGCGGGTAATGATGTCCCTCAAGTCTGGTCTCCTGG...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR TCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTCCAGGAGACCAGACTTaGGGGACATCATTACCCGCC +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIPGDQT*GTSLPA
Trigger: GGCGGGTAATGATGTCCCTCAAGTCTGGTCTCCTGG...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR TCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGCAACCCTGGGAGCTaGCTGAGGTTGAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCSNPGS*LRLKVM
Trigger: CATGACCTTCAACCTCAGTCAGCTCCCAGGGTTGCT...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAGGAGGTCCCTGTTGCTaGGAGTATGGGTTAGTCCCG +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLGGPCC*EYGLVP
Trigger: CGGGACTAACCCATACTCGCAGCAACAGGGACCTCC...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTGGAGGTCCCTGTTGCTaGGAGTATGGGTTAGTCCCG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIGGPCC*EYGLVP
Trigger: CGGGACTAACCCATACTCGCAGCAACAGGGACCTCC...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTGGGTACCCATGTCCTTaGTGCGGTCCTGACGGAGGT +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIGYPCP*CGPDGG
Trigger: ACCTCCGTCAGGACCGCAGCAAGGACATGGGTACCC...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTTGCTGTGTCGTCGACTaGTGGGAGGGGTATGGAGCC +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFICCVVD*WEGYGA
Trigger: GGCTCCATACCCCTCCCAGCAGTCGACGACACAGCA...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTGGTTCATGGAAGGATaGATGATGCTGTCCGACTGG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGWFMEG*MMLSDW
Trigger: CCAGTCGGACAGCATCATGCATCCTTCCATGAACCA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGGCCTCCAGCCATGCCTaGACTGGGGTAGTTGGCATT +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKASSHA*TGVVGI
Trigger: AATGCCAACTACCCCAGTGCAGGCATGGCTGGAGGC...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCACACCCATGGGGTTTATaGCTCCAGCCATGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPHPWGL*LQPCLH
Trigger: GTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTACACCCATGGGGTTTATaGCTCCAGCCATGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLHPWGL*LQPCLH
Trigger: GTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATCCCTGGAGGGAGTGTaGCATAAGGTGGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPSLEGV*HKVGCQ
Trigger: CTGGCATCCCACCTTATGGCACACTCCCTCCAGGGA...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGCTTGGGTGTCCCATCTaGCTTGTTGTTCATTTTGGT +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLLGCPI*LVVHFG
Trigger: ACCAAAATGAACAACAAGGCAGATGGGACACCCAAG...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAATTGGCTCATAGGACATaGGCCCCATCATGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKLAHRT*APSCQR
Trigger: CCTCTGACATGATGGGGCGCATGTCCTATGAGCCAA...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR GCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGGGGTGGAGAACTGATTaGCATAGGAATCATGTCGTT +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLGWRTD*HRNHVV
Trigger: AACGACATGATTCCTATGGCAATCAGTTCTCCACCC...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGGCTGCCAGAAGGGGTaGCTTGGGTGGAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPGCQKG*LGWRTD
Trigger: ATCAGTTCTCCACCCAAGGCACCCCTTCTGGCAGCC...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTTACATCTCCCCTTCGTaGCGCTTGGCAGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIYISPS*RLAGGP
Trigger: TGGCCCTCCTGCCAAGCGGCACGAAGGGGAGATGTA...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGTTTGCTGGGCATTGGTaGCAGGGGGTGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKFAGHW*QGVQRH
Trigger: GTGTCTCTGCACCCCCTGGCACCAATGCCCAGCAAA...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR GCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGTATCTAATGCCCATGTaGTCTCTGCCAGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGYLMPM*SLPGDQ
Trigger: CTGGTCTCCTGGCAGAGAGCACATGGGCATTAGATA...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR GCA 90 bp TCTAGGAAGCCCAGGAGGTTGCCGATACTGCCCTTCTGCACTGCAATGGCACGACATACTCCTTTAAAATaGCAAAGATCTCAATCAGGC +
Preference number: 4 (lower is better)
Translates to: SRKPRRLPILPFCTAMARHTPLK*QRSQSG
Trigger: GCCTGATTGAGATCTTTGGCATTTTAAAGGAGTATG...TCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTACCACCAATCCGCCAGTaGAGCAGGCCACTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLPPIRQ*SRPLSN
Trigger: GTTTGACAGTGGCCTGCTGCACTGGCGGATTGGTGG...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTCTGCTGTTGTCACATaGTTCCGAGGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAISAVVT*FRGAGG
Trigger: CCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGA...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp TTTCATAAGTTAGTGGTGCCTGCTTCCGTTCTGGGTGCTTGTGGTGCAGCAGGAACATCTCAAAGTCATTaGCTGGCACAAATGACAGGC +
Preference number: 4 (lower is better)
Translates to: FHKLVVPASVLGACGAAGTSQSH*LAQMTG
Trigger: GCCTGTCATTTGTGCCAGGCAATGACTTTGAGATGT...TCCTGCTGCACCACAAGCACCCAGAACGGAAGCAGGCACCACTAACTTATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466382.2
ENST00000532781.1
CDS-3UTR GCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATCTGGGTGCTTGTGGTaGAGCAGGATCAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLSGCLW*SRISLP
Trigger: GGGCAAGCTGATCCTGCTGCACCACAAGCACCCAGA...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGACTGCCCTTCTGCACTaGAATGGCACGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKTALLH*NGTSCQ
Trigger: CTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGT...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR GCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGTCAAAGGGTGGGTTCTaGATGTGGAGGAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKSKGGF*MWRRLA
Trigger: GGCCAGCCTCCTCCACATGCAGAACCCACCCTTTGA...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000636219.1
CDS-3UTR CCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGTTAGTCCCGCCATATaGCTGAGGTCTCATCTTGCC +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKVSPAI*LRSHLA
Trigger: GGCAAGATGAGACCTCAGCCATATGGCGGGACTAAC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGATAGATCAGGCAAGCTaGAGGGTCTTGACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGIDQAS*RVLTEG
Trigger: GCCTTCAGTCAAGACCCTCCAGCTTGCCTGATCTAT...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTTACTCTGCTCTCCTTaGCTGCTGGAAATCCCTGAT +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGLLCSP*LLEIPD
Trigger: ATCAGGGATTTCCAGCAGCCAAGGAGAGCAGAGTAA...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGGAAAGGAGACTGAGCTaGATTACTCTGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGERRLS*ITLLSL
Trigger: CAAGGAGAGCAGAGTAATCCAGCTCAGTCTCCTTTC...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTATGATGCTGTCCGACTaGCCACTGGGTGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIMMLSD*PLGGRG
Trigger: ACCTCGGCCACCCAGTGGCCAGTCGGACAGCATCAT...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAACAAGGCATTATAGTTTaGCTGCCTGGGGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKQGIIV*LPGVAT
Trigger: GGTGGCTACCCCAGGCAGCCAAACTATAATGCCTTG...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGTGGGGTAGTTGGCATTaGGCAAGGCATTATAGTTTG +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLWGSWH*ARHYSL
Trigger: CAAACTATAATGCCTTGCCCAATGCCAACTACCCCA...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp GTATGTGCAATGTACAACGTCATATATATACACACGTGGCAGCGTAGCCGCTGCCTGCACTGGGGTAGTTaGCATTGGGCAAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: VCAMYNVIYIHTWQRSRCLHWGS*HWARHY
Trigger: ATAATGCCTTGCCCAATGCCAACTACCCCAGTGCAG...GCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCAGCCATGCCTGCACTaGGGTAGTTGGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKQPCLH*GSWHWA
Trigger: TGCCCAATGCCAACTACCCCAGTGCAGGCATGGCTG...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTATTGACCTCCGGCACCCATaGGGTTTATGCCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SYEMWHPVDARTGKAIFIDLRHP*GLCLQP
Trigger: TGGCTGGAGGCATAAACCCCATGGGTGCCGGAGGTC...AATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAAGCGACAGCAGTTTCTTaGGTTTTCCGGTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKATAVS*VFRFMP
Trigger: GGGCATGAACCGGAAAACCCAAGAAACTGCTGTCGC...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGCATATTGGGGTAGCCTaGCGGCCTGTTTTGGATAGA +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGHIGVA*RPVLDR
Trigger: TCTATCCAAAACAGGCCGCCAGGCTACCCCAATATG...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTCCCCTTGATTCATATTaGGGTAGCCTGGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTPLDSY*GSLAAC
Trigger: ACAGGCCGCCAGGCTACCCCAATATGAATCAAGGGG...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTTGGGGGAAATCCACCCATGGAATATaGGGGTCCCTGAGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: RRERGQGVVGSHMILWGKSTHGI*GSLRVD
Trigger: ATCAACCCTCAGGGACCCCCATATTCCATGGGTGGA...TTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTAGCTGCAAAGATGTCTaGGGGAGGGTCTTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAISCKDV*GRVFSP
Trigger: CGGGGAGAAGACCCTCCCCCAGACATCTTTGCAGCT...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp CCATTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGGTTGACTGGGGAGTCTaGGGCCCCTGCATAGATCCT +
Preference number: 4 (lower is better)
Translates to: PLKTVMKCGIPLMQGLGKVDWGV*GPCIDP
Trigger: AGGATCTATGCAGGGGCCCCAGACTCCCCAGTCAAC...CTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAGTTGACTGGGGAGTCTaGGGCCCCTGCATAGATCCT +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLVDWGV*GPCIDP
Trigger: AGGATCTATGCAGGGGCCCCAGACTCCCCAGTCAAC...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTGTTGACTGGGGAGTCTaGGGCCCCTGCATAGATCCT +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIVDWGV*GPCIDP
Trigger: AGGATCTATGCAGGGGCCCCAGACTCCCCAGTCAAC...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TCTACTGCACAGGCCTCTCCAGTGAACAGGGTCTGTTCACAACTGCGAACTTCTATGGAATTCCGCTTCTaGAATGTGGAGTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: STAQASPVNRVCSQLRTSMEFRF*NVESLP
Trigger: TGGAAGTGACTCCACATTCCAGAAGCGGAATTCCAT...AGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCAGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp ATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGCAGAGGTATTCATACTaGGCTGATACCCAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: IKGNSQFLSSPHTHTHTGQRYSY*ADTQGL
Trigger: CAAACCCTGGGTATCAGCCCAGTATGAATACCTCTG...CCCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp GATCTCAGGGTTATTCATACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTCATGAGATTCGGCTGTaGGGCCCCAGTGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: DLRVIHTIKEERKRSGCCHEIRL*GPSAHV
Trigger: AACATGAGCACTGGGGCCCCACAGCCGAATCTCATG...ACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTAATGGAAATTGGTTCTaGGGGCCGCCTGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAINGNWF*GPPAGR
Trigger: CCGACCAGCAGGCGGCCCCCAGAACCAATTTCCATT...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTTGTTTTGCTGGGCATTaGTGCCAGGGGGTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTCFAGH*CQGVQR
Trigger: TCTCTGCACCCCCTGGCACCAATGCCCAGCAAAACA...AGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTTTTAGGTGGCATGTTTTGCTaGGCATTGGTGCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: TVMKCGIPLMQGLGKPFLGGMFC*ALVPGG
Trigger: ACCCCCTGGCACCAATGCCCAGCAAAACATGCCACC...TAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCATTGGGCTGGTAGTTAGATaGAGGGGGCCTTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: KNSYEMWHPVDARTGKAIGLVVR*RGPCHG
Trigger: CCCATGACAAGGCCCCCTCCATCTAACTACCAGCCC...AATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp TTAAAAACAGTTATGAAATGTGGCATCCCGTTGATGCAAGGACTGGGAAAGCCAGGGCTGGTAGTTAGATaGAGGGGGCCTTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: LKTVMKCGIPLMQGLGKPGLVVR*RGPCHG
Trigger: CCCATGACAAGGCCCCCTCCATCTAACTACCAGCCC...TGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000636219.1
CDS-3UTR CCA 90 bp AGAGGGGCGATATCTGGCAAGAGATTAAATAGCTGTGTCTCGCTTTGTGCAGGTATTCTGCATGCTTGGTaGGGGCTGGTAGTTAGATGG +
Preference number: 4 (lower is better)
Translates to: RGAISGKRLNSCVSLCAGILHAW*GLVVRW
Trigger: CCATCTAACTACCAGCCCCCACCAAGCATGCAGAAT...ACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGATATCGCCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324856.13
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGATTCTGCATGCTTGGTaGGGGCTGGTAGTTAGATGG +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGILHAW*GLVVRW
Trigger: CCATCTAACTACCAGCCCCCACCAAGCATGCAGAAT...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp AATAAAGGGCAACAGTCAGTTTCTAAGTTCTCCACACACGCACACACACACGGGGTGATTCTGCATGCTTaGTGGGGGCTGGTAGTTAGA +
Preference number: 4 (lower is better)
Translates to: NKGQQSVSKFSTHAHTHGVILHA*WGLVVR
Trigger: TCTAACTACCAGCCCCCACCAAGCATGCAGAATCAC...CCCGTGTGTGTGTGCGTGTGTGGAGAACTTAGAAACTGACTGTTGCCCTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp TCCCAAGGGAGAAGCTGGACAGCACAGGGTAAACTGGATTCTGAGGTGGTTTTGTGGGCTAATGCCAAATaGAAACTTGCTGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SQGRSWTAQGKLDSEVVLWANAK*KLAALL
Trigger: AAGGAGAGCAGCAAGTTTCCATTTGGCATTAGCCCA...CAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324856.13
ENST00000430799.7
ENST00000466382.2
ENST00000532781.1
ENST00000636219.1
CDS-3UTR CCA 90 bp ACAATCAAGGAGGAGAGAAAGAGGTCAGGGTGTTGTAGGTTCACACATGATACTCACAGACGCAGCGCTTaGCAAGAGAATCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TIKEERKRSGCCRFTHDTHRRSA*QENPAS