RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF6 (Homo sapiens)

Ensembl gene IDs: ENSG00000129675

Ensembl transcript IDs: ENST00000250617.7, ENST00000370620.5, ENST00000370622.5

Found 524 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTaGGGGCAATGGCTGTTGCAGAGGCACTGTGAACTGAAGGCAATC +
Preference number: 1 (lower is better)
Translates to: LASCFARAASPKNVT*GQWLLQRHCELKAI
Trigger: GATTGCCTTCAGTTCACAGTGCCTCTGCAACAGCCATTGCCCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR GCA 90 bp CTTCAGCTTCCAAACACGGCTGTGTGTGGTTGGCTGATGTTGGACTaGAAAAATAGTCCATTTCCTGTGGATGGTGTAATTTCTGCTGTG +
Preference number: 1 (lower is better)
Translates to: LQLPNTAVCGWLMLD*KNSPFPVDGVISAV
Trigger: CACAGCAGAAATTACACCATCCACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGTGTTTGGAAGCTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR CCA 90 bp TTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAAAGCCCTaGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTGCT +
Preference number: 1 (lower is better)
Translates to: FGKLSTKRLAGTGKP*GKVGFTFNKPWPAA
Trigger: AGCAGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR CCA 90 bp AGAAATTTCTTTACTCTTCAGCTTCCAAACACGGCTGTGTGTGGTTaGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGGATGGT +
Preference number: 1 (lower is better)
Translates to: RNFFTLQLPNTAVCG*LMLDCKNSPFPVDG
Trigger: ACCATCCACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGTGTTTGGAAGCTGAAGAGTAAAGAAATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR GCA 90 bp GGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTTCTaGAAATACTGCTTAGAGTCCCACCCAAAGAGGCCAATTAATATT +
Preference number: 1 (lower is better)
Translates to: GPFVLDVQVGPEAYF*KYCLESHPKRPINI
Trigger: AATATTAATTGGCCTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR GCA 90 bp GTTCTGGATGTACAAGTTGGACCAGAAGCATATTTCTGCAAATACTaGTTAGAGTCCCACCCAAAGAGGCCAATTAATATTACAACTTCT +
Preference number: 1 (lower is better)
Translates to: VLDVQVGPEAYFCKY*LESHPKRPINITTS
Trigger: AGAAGTTGTAATATTAATTGGCCTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACTTGTACATCCAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR GCA 90 bp CGTAATCACAAAAATGTTTCCTATAGATGCAGTTTGCACATTTATTaGAAGCCATTGACTAACCACAGAATGGGCAGATGTGAAGATCTG +
Preference number: 1 (lower is better)
Translates to: RNHKNVSYRCSLHIY*KPLTNHRMGRCEDL
Trigger: CAGATCTTCACATCTGCCCATTCTGTGGTTAGTCAATGGCTTGCAATAAATGTGCAAACTGCATCTATAGGAAACATTTTTGTGATTACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR TCA 90 bp AAAATGTTTCCTATAGATGCAGTTTGCACATTTATTGCAAGCCATTaGCTAACCACAGAATGGGCAGATGTGAAGATCTGTGTTGATGTT +
Preference number: 1 (lower is better)
Translates to: KMFPIDAVCTFIASH*LTTEWADVKICVDV
Trigger: AACATCAACACAGATCTTCACATCTGCCCATTCTGTGGTTAGTCAATGGCTTGCAATAAATGTGCAAACTGCATCTATAGGAAACATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAGGTGACCAGAGCTTCTaGCCCCCTGAGTTACAATTT +
Preference number: 2 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIGDQSF*PPELQF
Trigger: AAATTGTAACTCAGGGGGGCAGAAGCTCTGGTCACC...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAGGCTCCTCAGCAAGCTaGGGGTTTCAAACTTCAAGT +
Preference number: 2 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIGSSAS*GFQTSS
Trigger: ACTTGAAGTTTGAAACCCCCAGCTTGCTGAGGAGCC...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGAAACACGGCTGTGTGTaGTTGGCTGATGTTGGACTG +
Preference number: 2 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMKHGCV*LADVGL
Trigger: CAGTCCAACATCAGCCAACCACACACAGCCGTGTTT...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGCTTGGCCAGCTGCTTTaGAAGGGCAGCCAGCCCAAA +
Preference number: 2 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGLGQLL*KGSQPK
Trigger: TTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAG...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAGGGCAGCTGGATCATTaGGCAGATGTGTTTGTCTTT +
Preference number: 2 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIGQLDH*ADVFVF
Trigger: AAAGACAAACACATCTGCCCAATGATCCAGCTGCCC...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGCGGGACATTTCAAGATaGCCTGAAGGCACACTCCAC +
Preference number: 2 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLRDISR*PEGTLH
Trigger: GTGGAGTGTGCCTTCAGGGCATCTTGAAATGTCCCG...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCCCAAACAACAGCAAATaGCCAAGCGCGCACGTGCAC +
Preference number: 2 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFPNNSK*PSAHVH
Trigger: GTGCACGTGCGCGCTTGGGCATTTGCTGTTGTTTGG...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGACCAAACAACAGCAAATaGCCAAGCGCGCACGTGCAC +
Preference number: 2 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRPNNSK*PSAHVH
Trigger: GTGCACGTGCGCGCTTGGGCATTTGCTGTTGTTTGG...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGACATTTAATAAGCCTTaGCCAGCTGCTTTGCAAGGG +
Preference number: 2 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMTFNKP*PAALQG
Trigger: CCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGT...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCCATTTCAAGATGCCCTaGAGGCACACTCCACCCAGT +
Preference number: 2 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFHFKMP*RHTPPS
Trigger: ACTGGGTGGAGTGTGCCTTCAGGGCATCTTGAAATG...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGACATTTCAAGATGCCCTaGAGGCACACTCCACCCAGT +
Preference number: 2 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRHFKMP*RHTPPS
Trigger: ACTGGGTGGAGTGTGCCTTCAGGGCATCTTGAAATG...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGGAATGGAAAAGACTCTaGGGCCATCTCTACCACCAC +
Preference number: 2 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLEWKRL*GHLYHH
Trigger: GTGGTGGTAGAGATGGCCTCAGAGTCTTTTCCATTC...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTCCAGCCCAAAGAATGTaGCCTGAGGGCAATGGCTGT +
Preference number: 2 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAPAQRM*PEGNGC
Trigger: ACAGCCATTGCCCTCAGGTCACATTCTTTGGGCTGG...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGTTGAGGGGAGGCATGTaGTGGTCTAAGGAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVLRGGM*WSKEGQ
Trigger: CTGCCCTTCCTTAGACCATCACATGCCTCCCCTCAA...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGAACTTTCAATGGCGCTaGATTTGGATGTGTGCTGTT +
Preference number: 2 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMNFQWR*IWMCAV
Trigger: AACAGCACACATCCAAATTCAGCGCCATTGAAAGTT...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGAGGGGTGAGTGGCACTaGGCCTTAGGCCAACTTTCA +
Preference number: 2 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGRGEWH*ALGQLS
Trigger: TGAAAGTTGGCCTAAGGCTCAGTGCCACTCACCCCT...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTCTTGGCCAGCTGCTTTaGAAGGGCAGCCAGCCCAAA +
Preference number: 2 (lower is better)
Translates to: ATRGALLFWMYKLDQKHILGQLL*KGSQPK
Trigger: TTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAG...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATACTGAATTTGGATGTGTaGTGTTCTGTGACTGTCTTC +
Preference number: 2 (lower is better)
Translates to: SRVPRAPHQKGQVPETCILNLDV*CSVTVF
Trigger: GAAGACAGTCACAGAACAGCACACATCCAAATTCAG...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGAGGTGTGGGCCACCATaGCTGGCTTCAAGTTTGGTT +
Preference number: 2 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGRCGPP*LASSLV
Trigger: AACCAAACTTGAAGCCAGGCATGGTGGCCCACACCT...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGTCCATTTCCTGTGGATaGTGTAATTTCTGCTGTGCA +
Preference number: 2 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMSISCG*CNFCCA
Trigger: TGCACAGCAGAAATTACACCATCCACAGGAAATGGA...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTCATTTCAAGATGCCCTaGAGGCACACTCCACCCAGT +
Preference number: 2 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAHFKMP*RHTPPS
Trigger: ACTGGGTGGAGTGTGCCTTCAGGGCATCTTGAAATG...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTTTGAGGGGAGGCATGTaGTGGTCTAAGGAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSALRGGM*WSKEGQ
Trigger: CTGCCCTTCCTTAGACCATCACATGCCTCCCCTCAA...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTTTGAGGGGAGGCATGTaGTGGTCTAAGGAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSLRGGM*WSKEGQ
Trigger: CTGCCCTTCCTTAGACCATCACATGCCTCCCCTCAA...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCGGTACAGGAAAGCCCTaGGGAAAAGTTGGGTTCACA +
Preference number: 2 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFGTGKP*GKVGFT
Trigger: TGTGAACCCAACTTTTCCCCAGGGCTTTCCTGTACC...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATACACAGTTCTAGTTTCTaGGATAAAGTGGATGATGTG +
Preference number: 2 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIHSSSF*DKVDDV
Trigger: CACATCATCCACTTTATCCCAGAAACTAGAACTGTG...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCACAGTTCTAGTTTCTaGGATAAAGTGGATGATGTG +
Preference number: 2 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMHSSSF*DKVDDV
Trigger: CACATCATCCACTTTATCCCAGAAACTAGAACTGTG...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR CAA 90 bp GTGCAGCAAGCAGACAACAGCCCTGTACCATGTAGCTATGGGACCTaGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCT +
Preference number: 2 (lower is better)
Translates to: VQQADNSPVPCSYGT*RLSVPKIKRAPQQA
Trigger: AGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCCATAGCTACATGGTACAGGGCTGTTGTCTGCTTGCTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTCCAAAGAATGTGACCTaGGGGCAATGGCTGTTGCAG +
Preference number: 2 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSPKNVT*GQWLLQ
Trigger: CTGCAACAGCCATTGCCCTCAGGTCACATTCTTTGG...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTAGGGGTGAGTGGCACTaGGCCTTAGGCCAACTTTCA +
Preference number: 2 (lower is better)
Translates to: LASISSDLPHLAKFLLSFRGEWH*ALGQLS
Trigger: TGAAAGTTGGCCTAAGGCTCAGTGCCACTCACCCCT...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTCGGGACATTTCAAGATaGCCTGAAGGCACACTCCAC +
Preference number: 2 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSARDISR*PEGTLH
Trigger: GTGGAGTGTGCCTTCAGGGCATCTTGAAATGTCCCG...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTCGGGACATTTCAAGATaGCCTGAAGGCACACTCCAC +
Preference number: 2 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIRDISR*PEGTLH
Trigger: GTGGAGTGTGCCTTCAGGGCATCTTGAAATGTCCCG...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGGGTGACCAGAGCTTCTaGCCCCCTGAGTTACAATTT +
Preference number: 2 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGGDQSF*PPELQF
Trigger: AAATTGTAACTCAGGGGGGCAGAAGCTCTGGTCACC...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGGGGGCCCTTTTGTTCTaGATGTACAAGTTGGACCAG +
Preference number: 2 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVGALLF*MYKLDQ
Trigger: CTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCC...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGGGGGCCCTTTTGTTCTaGATGTACAAGTTGGACCAG +
Preference number: 2 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGGALLF*MYKLDQ
Trigger: CTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCC...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
49% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTGTTGCAGAGGCACTGTaGACTGAAGGCAATCTGAAG +
Preference number: 2 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSVAEAL*TEGNLK
Trigger: CTTCAGATTGCCTTCAGTTCACAGTGCCTCTGCAAC...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTGTTGCAGAGGCACTGTaGACTGAAGGCAATCTGAAG +
Preference number: 2 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAVAEAL*TEGNLK
Trigger: CTTCAGATTGCCTTCAGTTCACAGTGCCTCTGCAAC...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTCCAAAGAATGTGACCTaGGGGCAATGGCTGTTGCAG +
Preference number: 2 (lower is better)
Translates to: LASISSDLPHLAKFLLSFPKNVT*GQWLLQ
Trigger: CTGCAACAGCCATTGCCCTCAGGTCACATTCTTTGG...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGGACCTTTTAAGTAACTaGCCTGCATTCCCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLDLLSN*PAFPFS
Trigger: AGAGAAAGGGAATGCAGGCCAGTTACTTAAAAGGTC...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGATTTGGTGTTGGTGTaGGTGACCAGAGCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: LASISSDLPHLAKFLLSFDLVLV*VTRASA
Trigger: GGCAGAAGCTCTGGTCACCCACACCAACACCAAATC...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGGAATGGAAAAGACTCTaGGGCCATCTCTACCACCAC +
Preference number: 2 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEEWKRL*GHLYHH
Trigger: GTGGTGGTAGAGATGGCCTCAGAGTCTTTTCCATTC...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAGTTGCAGAGGCACTGTaGACTGAAGGCAATCTGAAG +
Preference number: 2 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKVAEAL*TEGNLK
Trigger: CTTCAGATTGCCTTCAGTTCACAGTGCCTCTGCAAC...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGACCAAAGAATGTGACCTaGGGGCAATGGCTGTTGCAG +
Preference number: 2 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGPKNVT*GQWLLQ
Trigger: CTGCAACAGCCATTGCCCTCAGGTCACATTCTTTGG...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGGGTACAGGAAAGCCCTaGGGAAAAGTTGGGTTCACA +
Preference number: 2 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEGTGKP*GKVGFT
Trigger: TGTGAACCCAACTTTTCCCCAGGGCTTTCCTGTACC...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTGGGCAGCTGGATCATTaGGCAGATGTGTTTGTCTTT +
Preference number: 2 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSGQLDH*ADVFVF
Trigger: AAAGACAAACACATCTGCCCAATGATCCAGCTGCCC...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTCTGGATGTACAAGTTaGACCAGAAGCATATTTCTG +
Preference number: 2 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLSGCTS*TRSIFL
Trigger: CAGAAATATGCTTCTGGTCCAACTTGTACATCCAGA...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCCCAGCCCAAAGAATGTaGCCTGAGGGCAATGGCTGT +
Preference number: 2 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGPAQRM*PEGNGC
Trigger: ACAGCCATTGCCCTCAGGTCACATTCTTTGGGCTGG...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCGATTTGGTGTTGGTGTaGGTGACCAGAGCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGDLVLV*VTRASA
Trigger: GGCAGAAGCTCTGGTCACCCACACCAACACCAAATC...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR CAA 90 bp TTTACTCTTCAGCTTCCAAACACGGCTGTGTGTGGTTGGCTGATGTaGGACTGCAAAAATAGTCCATTTCCTGTGGATGGTGTAATTTCT +
Preference number: 2 (lower is better)
Translates to: FTLQLPNTAVCGWLM*DCKNSPFPVDGVIS
Trigger: AGAAATTACACCATCCACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGTGTTTGGAAGCTGAAGAGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGTCCAGTAGAATTTGCTaGTGGATTTGGTGTTGGTGT +
Preference number: 2 (lower is better)
Translates to: KKPIMQWEKAVNSATKRESSRIC*WIWCWC
Trigger: ACACCAACACCAAATCCATCAGCAAATTCTACTGGA...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR TCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGATAAAGTGGATGATGTaGTTCAATGAGCAACTTGAG +
Preference number: 2 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVIKWMM*FNEQLE
Trigger: CTCAAGTTGCTCATTGAATCACATCATCCACTTTAT...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAGACCTTTTAAGTAACTaGCCTGCATTCCCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKDLLSN*PAFPFS
Trigger: AGAGAAAGGGAATGCAGGCCAGTTACTTAAAAGGTC...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCGTACTACAGTTTTCTTaGTCTTATAGACAACATAGG +
Preference number: 2 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFVLQFS*SYRQHR
Trigger: CCTATGTTGTCTATAAGACCAAGAAAACTGTAGTAC...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGGTACTACAGTTTTCTTaGTCTTATAGACAACATAGG +
Preference number: 2 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGVLQFS*SYRQHR
Trigger: CCTATGTTGTCTATAAGACCAAGAAAACTGTAGTAC...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTTATTTCTGCAAATACTaGTTAGAGTCCCACCCAAAG +
Preference number: 2 (lower is better)
Translates to: LASISSDLPHLAKFLLSFYFCKY*LESHPK
Trigger: CTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATA...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCGCATGGTTACCACTCTaGACAAGCTTCGTTATCCAG +
Preference number: 2 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGAWLPL*TSFVIQ
Trigger: CTGGATAACGAAGCTTGTGCAGAGTGGTAACCATGC...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR GCA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCCCTATAGATGCAGTTTaGACATTTATTGCAAGCCAT +
Preference number: 2 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGPIDAV*TFIASH
Trigger: ATGGCTTGCAATAAATGTGCAAACTGCATCTATAGG...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATACCTTGGCCAGCTGCTTaGCAAGGGCAGCCAGCCCAA +
Preference number: 3 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIPWPAA*QGQPAQ
Trigger: TTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGG...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCCTTGGCCAGCTGCTTaGCAAGGGCAGCCAGCCCAA +
Preference number: 3 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMPWPAA*QGQPAQ
Trigger: TTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGG...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR TCA 72 bp CCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTaGCCTGAGGGCAATGGCTGTTGCAGAGGCACTGTG +
Preference number: 3 (lower is better)
Translates to: PAALQGQPAQRM*PEGNGCCRGTV
Trigger: CACAGTGCCTCTGCAACAGCCATTGCCCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGCCTTGGCCAGCTGCTTaGCAAGGGCAGCCAGCCCAA +
Preference number: 3 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLPWPAA*QGQPAQ
Trigger: TTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGG...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAAGGGCAGCTGGATCATaGGGCAGATGTGTTTGTCTT +
Preference number: 3 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIRAAGS*GRCVCL
Trigger: AAGACAAACACATCTGCCCAATGATCCAGCTGCCCT...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATACACCACTTGGTAAGGTaGGCTAAAAGTACTGGGGAA +
Preference number: 3 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIHHLVR*AKSTGE
Trigger: TTCCCCAGTACTTTTAGCCAACCTTACCAAGTGGTG...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGACTAGAGGGGCCCTTTaGTTCTGGATGTACAAGTTG +
Preference number: 3 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMTRGAL*FWMYKL
Trigger: CAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGT...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGTCAATGGCGCTGAATTaGGATGTGTGCTGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMSMALN*DVCCSV
Trigger: CACAGAACAGCACACATCCAAATTCAGCGCCATTGA...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATATCAATGGCGCTGAATTaGGATGTGTGCTGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: SRVPRAPHQKGQVPETCISMALN*DVCCSV
Trigger: CACAGAACAGCACACATCCAAATTCAGCGCCATTGA...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGATTCTGATCAGCCCTTaGGCCTCAATTTCCAGTGAC +
Preference number: 3 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMILISP*ASISSD
Trigger: GTCACTGGAAATTGAGGCCAAAGGGCTGATCAGAAT...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGATTTATTGCAAGCCATaGACTAACCACAGAATGGGC +
Preference number: 3 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMIYCKP*TNHRMG
Trigger: GCCCATTCTGTGGTTAGTCAATGGCTTGCAATAAAT...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTCTGATGGATTTGGTGTaGGTGTGGGTGACCAGAGCT +
Preference number: 3 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSLMDLV*VWVTRA
Trigger: AGCTCTGGTCACCCACACCAACACCAAATCCATCAG...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCAATTTGCTGATGGATTaGGTGTTGGTGTGGGTGACC +
Preference number: 3 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFNLLMD*VLVWVT
Trigger: GGTCACCCACACCAACACCAAATCCATCAGCAAATT...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGAATTTGCTGATGGATTaGGTGTTGGTGTGGGTGACC +
Preference number: 3 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGNLLMD*VLVWVT
Trigger: GGTCACCCACACCAACACCAAATCCATCAGCAAATT...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR TCA 72 bp CTCTTCAGCTTCCAAACACGGCTGTGTGTGGTTGGCTaGTGTTGGACTGCAAAAATAGTCCATTTCCTGTGG +
Preference number: 3 (lower is better)
Translates to: LFSFQTRLCVVG*CWTAKIVHFLW
Trigger: CCACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGTGTTTGGAAGCTGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGATTGGGCAGATGTGTTaGTCTTTCATCCTACTCAAG +
Preference number: 3 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLIGQMC*SFILLK
Trigger: CTTGAGTAGGATGAAAGACAAACACATCTGCCCAAT...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTAGGGCAGCTGGATCATaGGGCAGATGTGTTTGTCTT +
Preference number: 3 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSRAAGS*GRCVCL
Trigger: AAGACAAACACATCTGCCCAATGATCCAGCTGCCCT...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAACTGATGGATTTGGTGTaGGTGTGGGTGACCAGAGCT +
Preference number: 3 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKLMDLV*VWVTRA
Trigger: AGCTCTGGTCACCCACACCAACACCAAATCCATCAG...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGACTAGAGGGGCCCTTTaGTTCTGGATGTACAAGTTG +
Preference number: 3 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVTRGAL*FWMYKL
Trigger: CAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGT...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGCAGCTGGATCATaGGGCAGATGTGTTTGTCTT +
Preference number: 3 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKRAAGS*GRCVCL
Trigger: AAGACAAACACATCTGCCCAATGATCCAGCTGCCCT...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR CCA 72 bp ATCCAGCACACAGCTACTAGAGGGGCCCTTTTGTTCTaGATGTACAAGTTGGACCAGAAGCATATTTCTGCA +
Preference number: 3 (lower is better)
Translates to: IQHTATRGALLF*MYKLDQKHISA
Trigger: TGCAGAAATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGCTGTGTGCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAATTTGCTGATGGATTaGGTGTTGGTGTGGGTGACC +
Preference number: 3 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKNLLMD*VLVWVT
Trigger: GGTCACCCACACCAACACCAAATCCATCAGCAAATT...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCCACGGCTGTGTGTGGTaGGCTGATGTTGGACTGCAA +
Preference number: 3 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGHGCVW*ADVGLQ
Trigger: TTGCAGTCCAACATCAGCCAACCACACACAGCCGTG...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR GCA 72 bp GTTCTGGATGTACAAGTTGGACCAGAAGCATATTTCTaGAAATACTGCTTAGAGTCCCACCCAAAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: VLDVQVGPEAYF*KYCLESHPKRP
Trigger: TGGCCTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACTTGTACATCCAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR GCA 72 bp CCAAACACGGCTGTGTGTGGTTGGCTGATGTTGGACTaGAAAAATAGTCCATTTCCTGTGGATGGTGTAATT +
Preference number: 3 (lower is better)
Translates to: PNTAVCGWLMLD*KNSPFPVDGVI
Trigger: AATTACACCATCCACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGTGTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR CCA 72 bp TTAAGTACTAAGAGGCTTGCAGGTACAGGAAAGCCCTaGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: LSTKRLAGTGKP*GKVGFTFNKPW
Trigger: CCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGTACCTGCAAGCCTCTTAGTACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR CCA 72 bp TTTACTCTTCAGCTTCCAAACACGGCTGTGTGTGGTTaGCTGATGTTGGACTGCAAAAATAGTCCATTTCCT +
Preference number: 3 (lower is better)
Translates to: FTLQLPNTAVCG*LMLDCKNSPFP
Trigger: AGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGTGTTTGGAAGCTGAAGAGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGATTGGGCAGATGTGTTaGTCTTTCATCCTACTCAAG +
Preference number: 3 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEIGQMC*SFILLK
Trigger: CTTGAGTAGGATGAAAGACAAACACATCTGCCCAAT...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR TCA 72 bp CCTATAGATGCAGTTTGCACATTTATTGCAAGCCATTaGCTAACCACAGAATGGGCAGATGTGAAGATCTGT +
Preference number: 3 (lower is better)
Translates to: PIDAVCTFIASH*LTTEWADVKIC
Trigger: ACAGATCTTCACATCTGCCCATTCTGTGGTTAGTCAATGGCTTGCAATAAATGTGCAAACTGCATCTATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCTGTAGCTATGGGACCTaGAGACTCTCAGTACCAAAA +
Preference number: 3 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGCSYGT*RLSVPK
Trigger: TTTTGGTACTGAGAGTCTCAAGGTCCCATAGCTACA...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR GCA 72 bp GTACAAGTTGGACCAGAAGCATATTTCTGCAAATACTaGTTAGAGTCCCACCCAAAGAGGCCAATTAATATT +
Preference number: 3 (lower is better)
Translates to: VQVGPEAYFCKY*LESHPKRPINI
Trigger: AATATTAATTGGCCTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACTTGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR-3UTR CAA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCTTCTGGATGTACAAGTaGGACCAGAAGCATATTTCT +
Preference number: 3 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGFWMYK*DQKHIS
Trigger: AGAAATATGCTTCTGGTCCAACTTGTACATCCAGAA...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR TCA 72 bp CTCACAGTTCTAGTTTCTGGGATAAAGTGGATGATGTaGTTCAATGAGCAACTTGAGTTAATCAGTCCTGAA +
Preference number: 3 (lower is better)
Translates to: LTVLVSGIKWMM*FNEQLELISPE
Trigger: TTCAGGACTGATTAACTCAAGTTGCTCATTGAATCACATCATCCACTTTATCCCAGAAACTAGAACTGTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAATCTGGCTCGGCCGCTaGCCGCCTGTCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIIWLGR*PPVLQL
Trigger: CAGCTGGAGGACAGGCGGGCAGCGGCCGAGCCAGAT...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370620.5
CDS-3UTR TCA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGTTGAGGGGAGGCATGTaGTGGTCTAAGGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMLRGGM*WSKEGQ
Trigger: CTGCCCTTCCTTAGACCATCACATGCCTCCCCTCAA...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGGGACAGAAAAGGAACTaGAAGGCCTCTACGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMGQKRN*KASTGS
Trigger: GCTGCCCGTAGAGGCCTTTCAGTTCCTTTTCTGTCC...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp AGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTGAGGCGGGACATTTCAAGATaGCCTGAAGGCACACTCCAC +
Preference number: 4 (lower is better)
Translates to: SLGQLLCKGSQPKECDLRRDISR*PEGTLH
Trigger: GTGGAGTGTGCCTTCAGGGCATCTTGAAATGTCCCG...CCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAGAGCCATGGCCTTGTTaGAAATTTGCGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIEPWPC*KFALVQ
Trigger: CTGCACCAGCGCAAATTTTCAACAAGGCCATGGCTC...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATACCAAAGAATGTGACCTaGGGGCAATGGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIPKNVT*GQWLLQ
Trigger: CTGCAACAGCCATTGCCCTCAGGTCACATTCTTTGG...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTGGGCGGGCAAGCCTGTaGCAAGGCTGCGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAGRASL*QGCGNR
Trigger: TCTGTTCCCGCAGCCTTGGCACAGGCTTGCCCGCCC...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370620.5
CDS-3UTR GCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTCGCCTGTCCTCCAGCTaGTCCCTCACTCCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIRLSSS*SLTPAA
Trigger: CGCGGCTGGAGTGAGGGAGCAGCTGGAGGACAGGCG...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370620.5
CDS-3UTR GCA 90 bp AGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTGAGGGTCTTTGACTGCCTTTaGAGCCCTGAAACTGTGCTA +
Preference number: 4 (lower is better)
Translates to: SLGQLLCKGSQPKECDLRVFDCL*SPETVL
Trigger: TAGCACAGTTTCAGGGCTGCAAAGGCAGTCAAAGAC...CCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATATCCTTTGACGGCTTTTaGGGAGAGAGGTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: SRVPRAPHQKGQVPETCISFDGF*GERSLT
Trigger: AGTGAGAGACCTCTCTCCCCAAAAGCCGTCAAAGGA...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAGGGGCCCTTTTGTTCTaGATGTACAAGTTGGACCAG +
Preference number: 4 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIGALLF*MYKLDQ
Trigger: CTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCC...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAAAACACGGCTGTGTGTaGTTGGCTGATGTTGGACTG +
Preference number: 4 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIKHGCV*LADVGL
Trigger: CAGTCCAACATCAGCCAACCACACACAGCCGTGTTT...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGGGGCTCGATGCACCTTaGTTTTCCATGAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMGLDAP*FSMNCS
Trigger: GGAACAATTCATGGAAAATCAAGGTGCATCGAGCCC...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp AGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTGAGGCAGAATGGGCAGATGTaGAGATCTGTGTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: SLGQLLCKGSQPKECDLRQNGQM*RSVLML
Trigger: CAACATCAACACAGATCTTCACATCTGCCCATTCTG...CCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGTTCCACTTGGAGGGTTaGACATCCTTTCAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMFHLEG*TSFQEV
Trigger: GACTTCCTGAAAGGATGTGCAACCCTCCAAGTGGAA...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS-3UTR GCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAGAAGAATTGAGGTCTTaGTACTGGACTCGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIEELRS*YWTRLE
Trigger: TTCGAGGCGAGTCCAGTAGCAAGACCTCAATTCTTC...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp AGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTGAGGGGATGGTGTAATTTCTaGTGTGCAGCAAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: SLGQLLCKGSQPKECDLRGWCNF*CAASRQ
Trigger: TTGTCTGCTTGCTGCACAGCAGAAATTACACCATCC...CCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTGAGGCTCCAGTCGCATGAATaGTTTGCTGAGGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SLGQLLCKGSQPKECDLRLQSHE*FAEVCC
Trigger: ACAACAAACCTCAGCAAACCATTCATGCGACTGGAG...CCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTGAGGCATTCCTGGAAGTCCTaGTTGTTGTTACAATGGACC +
Preference number: 4 (lower is better)
Translates to: SLGQLLCKGSQPKECDLRHSWKS*LLLQWT
Trigger: GGTCCATTGTAACAACAACCAGGACTTCCAGGAATG...CCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGGTGGGCCACCATGCCTaGCTTCAAGTTTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMVGHHA*LQVWFL
Trigger: TAAAAACCAAACTTGAAGCCAGGCATGGTGGCCCAC...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGCTGCCTTTGCAGCCCTaGAACTGTGCTAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLLPLQP*NCARNC
Trigger: GCAGTTTCTAGCACAGTTTCAGGGCTGCAAAGGCAG...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp AGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTGAGGATCTTTTCGAGTACTTaGGCCATGGCCTTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: SLGQLLCKGSQPKECDLRIFSST*AMALLK
Trigger: TTTCAACAAGGCCATGGCTCAAGTACTCGAAAAGAT...CCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGTTGAGGGGAGGCATGTaGTGGTCTAAGGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGLRGGM*WSKEGQ
Trigger: CTGCCCTTCCTTAGACCATCACATGCCTCCCCTCAA...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAAGGGGTGAGTGGCACTaGGCCTTAGGCCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRRGEWH*ALGQLS
Trigger: TGAAAGTTGGCCTAAGGCTCAGTGCCACTCACCCCT...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATACTGTGTGTGGTTGGCTaGTGTTGGACTGCAAAAATA +
Preference number: 4 (lower is better)
Translates to: SRVPRAPHQKGQVPETCILCVVG*CWTAKI
Trigger: TATTTTTGCAGTCCAACATCAGCCAACCACACACAG...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGCTTGGCCAGCTGCTTTaGAAGGGCAGCCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVLGQLL*KGSQPK
Trigger: TTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAG...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGGGATGGTGTAATTTCTaGTGTGCAGCAAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMGWCNF*CAASRQ
Trigger: TTGTCTGCTTGCTGCACAGCAGAAATTACACCATCC...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAATCACTTTAAGGATTTaGGCATCCTCTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIITLRI*ASSSRA
Trigger: TGCTCTGGAAGAGGATGCTCAAATCCTTAAAGTGAT...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCGGCTCTTTTCTTCCATaGTGGTCTGGCCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFGSFLP*WSGRCF
Trigger: GAAGCAACGGCCAGACCATCATGGAAGAAAAGAGCC...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGCCAGCCCAAAGAATGTaGCCTGAGGGCAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGPAQRM*PEGNGC
Trigger: ACAGCCATTGCCCTCAGGTCACATTCTTTGGGCTGG...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTTTGAGGGGAGGCATGTaGTGGTCTAAGGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPALRGGM*WSKEGQ
Trigger: CTGCCCTTCCTTAGACCATCACATGCCTCCCCTCAA...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTGGACAGAAAAGGAACTaGAAGGCCTCTACGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAGQKRN*KASTGS
Trigger: GCTGCCCGTAGAGGCCTTTCAGTTCCTTTTCTGTCC...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCCGGGACATTTCAAGATaGCCTGAAGGCACACTCCAC +
Preference number: 4 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFRDISR*PEGTLH
Trigger: GTGGAGTGTGCCTTCAGGGCATCTTGAAATGTCCCG...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTCTTGGCCAGCTGCTTTaGAAGGGCAGCCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSALGQLL*KGSQPK
Trigger: TTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAG...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCGCACACTCCACCCAGTaGCACAGTGATGGTTATGGA +
Preference number: 4 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFAHSTQ*HSDGYG
Trigger: TCCATAACCATCACTGTGCCACTGGGTGGAGTGTGC...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAGATTTGGTGTTGGTGTaGGTGACCAGAGCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRDLVLV*VTRASA
Trigger: GGCAGAAGCTCTGGTCACCCACACCAACACCAAATC...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGGGCTCCTCAGCAAGCTaGGGGTTTCAAACTTCAAGT +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLGSSAS*GFQTSS
Trigger: ACTTGAAGTTTGAAACCCCCAGCTTGCTGAGGAGCC...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCTCAGGATCAAATATCTaGCTCGGCCGCTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLSGSNI*LGRCPP
Trigger: AGGCGGGCAGCGGCCGAGCCAGATATTTGATCCTGA...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370620.5
CDS-3UTR TCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGCATCACTGTGCTGAGTaGGCACATTTACAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLHHCAE*AHLQLK
Trigger: CTTCAGCTGTAAATGTGCTCACTCAGCACAGTGATG...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGTCTCCTTCCCATGCCTaGATAGGTTCGGACAGTATC +
Preference number: 4 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGSPSHA*IGSDSI
Trigger: GATACTGTCCGAACCTATTCAGGCATGGGAAGGAGA...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTGGCTCTTTTCTTCCATaGTGGTCTGGCCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAGSFLP*WSGRCF
Trigger: GAAGCAACGGCCAGACCATCATGGAAGAAAAGAGCC...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGCATTTCAAGATGCCCTaGAGGCACACTCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGHFKMP*RHTPPS
Trigger: ACTGGGTGGAGTGTGCCTTCAGGGCATCTTGAAATG...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCGTTGCAGAGGCACTGTaGACTGAAGGCAATCTGAAG +
Preference number: 4 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFVAEAL*TEGNLK
Trigger: CTTCAGATTGCCTTCAGTTCACAGTGCCTCTGCAAC...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTCCAGCCCAAAGAATGTaGCCTGAGGGCAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIPAQRM*PEGNGC
Trigger: ACAGCCATTGCCCTCAGGTCACATTCTTTGGGCTGG...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTAGGGGTGAGTGGCACTaGGCCTTAGGCCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSRGEWH*ALGQLS
Trigger: TGAAAGTTGGCCTAAGGCTCAGTGCCACTCACCCCT...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGATCAGTCTGTTCAGCTaGTCCAACCATTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLISLFS*SNHSWK
Trigger: CTTCCAGGAATGGTTGGAGCAGCTGAACAGACTGAT...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGCGGGACATTTCAAGATaGCCTGAAGGCACACTCCAC +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGRDISR*PEGTLH
Trigger: GTGGAGTGTGCCTTCAGGGCATCTTGAAATGTCCCG...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGGGTGACCAGAGCTTCTaGCCCCCTGAGTTACAATTT +
Preference number: 4 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGGDQSF*PPELQF
Trigger: AAATTGTAACTCAGGGGGGCAGAAGCTCTGGTCACC...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp AGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTGAGGCCTATAGATGCAGTTTaGACATTTATTGCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SLGQLLCKGSQPKECDLRPIDAV*TFIASH
Trigger: ATGGCTTGCAATAAATGTGCAAACTGCATCTATAGG...CCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGATCCTTTGACGGCTTTTaGGGAGAGAGGTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRSFDGF*GERSLT
Trigger: AGTGAGAGACCTCTCTCCCCAAAAGCCGTCAAAGGA...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATATGGTTGTTGTTACAATaGACCACAATTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIWLLLQ*TTILST
Trigger: AGTGGAGAGAATTGTGGTCCATTGTAACAACAACCA...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGGATTTGGTGTTGGTGTaGGTGACCAGAGCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVDLVLV*VTRASA
Trigger: GGCAGAAGCTCTGGTCACCCACACCAACACCAAATC...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTCTGCCTTTGCAGCCCTaGAACTGTGCTAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSALPLQP*NCARNC
Trigger: GCAGTTTCTAGCACAGTTTCAGGGCTGCAAAGGCAG...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGGTCCCCCTTACAAACTaGCAGTTCATCCTCATTAGT +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLVPLTN*QFILIS
Trigger: ACTAATGAGGATGAACTGTCAGTTTGTAAGGGGGAC...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGGAGCACATTTACAGCTaGAGGATGGTTTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLEHIYS*RMVCTV
Trigger: TACTGTGCAAACCATCCTTCAGCTGTAAATGTGCTC...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCTGCACCATTACTTGTaGCATAAAAATCACATTTCC +
Preference number: 4 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMLHHYL*HKNHIS
Trigger: GGAAATGTGATTTTTATGTCACAAGTAATGGTGCAG...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTGAGCCATGGCCTTGTTaGAAATTTGCGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAEPWPC*KFALVQ
Trigger: CTGCACCAGCGCAAATTTTCAACAAGGCCATGGCTC...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTCATTTCAAGATGCCCTaGAGGCACACTCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIHFKMP*RHTPPS
Trigger: ACTGGGTGGAGTGTGCCTTCAGGGCATCTTGAAATG...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTCCAAAGAATGTGACCTaGGGGCAATGGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIPKNVT*GQWLLQ
Trigger: CTGCAACAGCCATTGCCCTCAGGTCACATTCTTTGG...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGGTAGCTATGGGACCTTaGGACTCTCAGTACCAAAAA +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLVAMGP*DSQYQK
Trigger: TTTTTGGTACTGAGAGTCTCAAGGTCCCATAGCTAC...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGCTGTGTGTGGTTGGCTaGTGTTGGACTGCAAAAATA +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLLCVVG*CWTAKI
Trigger: TATTTTTGCAGTCCAACATCAGCCAACCACACACAG...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGGTCTTTGACTGCCTTTaGAGCCCTGAAACTGTGCTA +
Preference number: 4 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGVFDCL*SPETVL
Trigger: TAGCACAGTTTCAGGGCTGCAAAGGCAGTCAAAGAC...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCGTCTTTGACTGCCTTTaGAGCCCTGAAACTGTGCTA +
Preference number: 4 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFVFDCL*SPETVL
Trigger: TAGCACAGTTTCAGGGCTGCAAAGGCAGTCAAAGAC...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGATTCTCCCATTTAATGTaGCTTCCCACCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRFSHLM*LPTSLL
Trigger: AAGGAGGCTGGTGGGAAGGCACATTAAATGGGAGAA...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGATCTTCTCCTTCCCATaGCTGAATAGGTTCGGACAG +
Preference number: 4 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGIFSFP*LNRFGQ
Trigger: CTGTCCGAACCTATTCAGGCATGGGAAGGAGAAGAT...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGGCCTTGTTGAAAATTTaGGCTGGTGCAGTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGALLKI*AGAVGF
Trigger: GAAGCCTACTGCACCAGCGCAAATTTTCAACAAGGC...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGCCAAACAACAGCAAATaGCCAAGCGCGCACGTGCAC +
Preference number: 4 (lower is better)
Translates to: KKPIMQWEKAVNSATKREPNNSK*PSAHVH
Trigger: GTGCACGTGCGCGCTTGGGCATTTGCTGTTGTTTGG...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTCCAAACAACAGCAAATaGCCAAGCGCGCACGTGCAC +
Preference number: 4 (lower is better)
Translates to: LASISSDLPHLAKFLLSFPNNSK*PSAHVH
Trigger: GTGCACGTGCGCGCTTGGGCATTTGCTGTTGTTTGG...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCAGGTGTGGGCCACCATaGCTGGCTTCAAGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLRCGPP*LASSLV
Trigger: AACCAAACTTGAAGCCAGGCATGGTGGCCCACACCT...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTAGGTGTGGGCCACCATaGCTGGCTTCAAGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSRCGPP*LASSLV
Trigger: AACCAAACTTGAAGCCAGGCATGGTGGCCCACACCT...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCTTACCTAGGTTGGAGTaGAGTGGTGTCATCACAGCT +
Preference number: 4 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFLPRLE*SGVITA
Trigger: AGCTGTGATGACACCACTGCACTCCAACCTAGGTAA...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGGCATGGTTACCACTCTaGACAAGCTTCGTTATCCAG +
Preference number: 4 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGAWLPL*TSFVIQ
Trigger: CTGGATAACGAAGCTTGTGCAGAGTGGTAACCATGC...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGCAACTATGGCGACACTaGTCTCAGATTAACATGGCT +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLQLWRH*SQINMA
Trigger: AGCCATGTTAATCTGAGAGCAGTGTCGCCATAGTTG...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGCACGGACATAATTACTaGGGAACCAGCCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGHGHNY*GTSLFS
Trigger: GGAGAACAGGCTGGTTCCCCAGTAATTATGTCCGTG...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGGTTGAAAATTTGCGCTaGTGCAGTAGGCTTCGATCA +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLVENLR*CSRLRS
Trigger: TGATCGAAGCCTACTGCACCAGCGCAAATTTTCAAC...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGATTGAGGTCTTGCTACTaGACTCGCCTCGAATACACT +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRLRSCY*TRLEYT
Trigger: AGTGTATTCGAGGCGAGTCCAGTAGCAAGACCTCAA...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGGGTACAGGAAAGCCCTaGGGAAAAGTTGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGGTGKP*GKVGFT
Trigger: TGTGAACCCAACTTTTCCCCAGGGCTTTCCTGTACC...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGGGTACAGGAAAGCCCTaGGGAAAAGTTGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVGTGKP*GKVGFT
Trigger: TGTGAACCCAACTTTTCCCCAGGGCTTTCCTGTACC...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTGATTTGGTGTTGGTGTaGGTGACCAGAGCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIDLVLV*VTRASA
Trigger: GGCAGAAGCTCTGGTCACCCACACCAACACCAAATC...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTAAACACGGCTGTGTGTaGTTGGCTGATGTTGGACTG +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAKHGCV*LADVGL
Trigger: CAGTCCAACATCAGCCAACCACACACAGCCGTGTTT...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR CAA 72 bp CAGCTTCCAAACACGGCTGTGTGTGGTTGGCTGATGTaGGACTGCAAAAATAGTCCATTTCCTGTGGATGGT +
Preference number: 4 (lower is better)
Translates to: QLPNTAVCGWLM*DCKNSPFPVDG
Trigger: ACCATCCACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGTGTTTGGAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGGTACCTTGGAGAAATTaGCCCCTGAATAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLVPWRN*PLNKGH
Trigger: ATGACCTTTATTCAGGGGTCAATTTCTCCAAGGTAC...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGGTCCCCCTTACAAACTaGCAGTTCATCCTCATTAGT +
Preference number: 4 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGVPLTN*QFILIS
Trigger: ACTAATGAGGATGAACTGTCAGTTTGTAAGGGGGAC...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCTCTCCTTCCCATGCCTaGATAGGTTCGGACAGTATC +
Preference number: 4 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLSPSHA*IGSDSI
Trigger: GATACTGTCCGAACCTATTCAGGCATGGGAAGGAGA...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTTCTCCTTCCCATGCCTaGATAGGTTCGGACAGTATC +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHISPSHA*IGSDSI
Trigger: GATACTGTCCGAACCTATTCAGGCATGGGAAGGAGA...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTGAATGGAAAAGACTCTaGGGCCATCTCTACCACCAC +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAEWKRL*GHLYHH
Trigger: GTGGTGGTAGAGATGGCCTCAGAGTCTTTTCCATTC...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTGAATGGAAAAGACTCTaGGGCCATCTCTACCACCAC +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSEWKRL*GHLYHH
Trigger: GTGGTGGTAGAGATGGCCTCAGAGTCTTTTCCATTC...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCGTTGCAGAGGCACTGTaGACTGAAGGCAATCTGAAG +
Preference number: 4 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLVAEAL*TEGNLK
Trigger: CTTCAGATTGCCTTCAGTTCACAGTGCCTCTGCAAC...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGCCAAAGAATGTGACCTaGGGGCAATGGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: KKPIMQWEKAVNSATKREPKNVT*GQWLLQ
Trigger: CTGCAACAGCCATTGCCCTCAGGTCACATTCTTTGG...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGACCAGCCCAAAGAATGTaGCCTGAGGGCAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGPAQRM*PEGNGC
Trigger: ACAGCCATTGCCCTCAGGTCACATTCTTTGGGCTGG...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAAGGGGTGAGTGGCACTaGGCCTTAGGCCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGRGEWH*ALGQLS
Trigger: TGAAAGTTGGCCTAAGGCTCAGTGCCACTCACCCCT...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTTCCACTGTCTTTGACTaGCTTTGCAGCCCTGAAACT +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPASTVFD*LCSPET
Trigger: AGTTTCAGGGCTGCAAAGGCAGTCAAAGACAGTGGA...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAGATACCTGGGCTCGATaGACCTTGATTTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRDTWAR*TLIFHE
Trigger: TTCATGGAAAATCAAGGTGCATCGAGCCCAGGTATC...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGGAAGAATTGAGGTCTTaGTACTGGACTCGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGEELRS*YWTRLE
Trigger: TTCGAGGCGAGTCCAGTAGCAAGACCTCAATTCTTC...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTAGGTGTGGGCCACCATaGCTGGCTTCAAGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LASISSDLPHLAKFLLSFRCGPP*LASSLV
Trigger: AACCAAACTTGAAGCCAGGCATGGTGGCCCACACCT...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCCAACTATGGCGACACTaGTCTCAGATTAACATGGCT +
Preference number: 4 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFQLWRH*SQINMA
Trigger: AGCCATGTTAATCTGAGAGCAGTGTCGCCATAGTTG...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGAGAAACTGCTCCCTGTaGGTTTGTCTGAGAAGTATT +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLRNCSL*VCLRSI
Trigger: AATACTTCTCAGACAAACCCACAGGGAGCAGTTTCT...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTCACGGACATAATTACTaGGGAACCAGCCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAHGHNY*GTSLFS
Trigger: GGAGAACAGGCTGGTTCCCCAGTAATTATGTCCGTG...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGTCTTCCATGATGGTCTaGCCGTTGCTTCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGSSMMV*PLLLVS
Trigger: AGAAACCAGAAGCAACGGCCAGACCATCATGGAAGA...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTTCTTCCATGATGGTCTaGCCGTTGCTTCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPASSMMV*PLLLVS
Trigger: AGAAACCAGAAGCAACGGCCAGACCATCATGGAAGA...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGGCACACTCCACCCAGTaGCACAGTGATGGTTATGGA +
Preference number: 4 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEAHSTQ*HSDGYG
Trigger: TCCATAACCATCACTGTGCCACTGGGTGGAGTGTGC...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAGCACACTCCACCCAGTaGCACAGTGATGGTTATGGA +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKAHSTQ*HSDGYG
Trigger: TCCATAACCATCACTGTGCCACTGGGTGGAGTGTGC...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGGGGCAGCTGGATCATTaGGCAGATGTGTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGGQLDH*ADVFVF
Trigger: AAAGACAAACACATCTGCCCAATGATCCAGCTGCCC...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTGGGGCCCTTTTGTTCTaGATGTACAAGTTGGACCAG +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIGALLF*MYKLDQ
Trigger: CTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCC...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTGTGGGCCACCATGCCTaGCTTCAAGTTTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAVGHHA*LQVWFL
Trigger: TAAAAACCAAACTTGAAGCCAGGCATGGTGGCCCAC...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCACGGCTGTGTGTGGTTaGCTGATGTTGGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLTAVCG*LMLDCK
Trigger: TTTGCAGTCCAACATCAGCCAACCACACACAGCCGT...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTCCCTGTGGGTTTGTCTaGGAAGTATTAGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAPCGFV*EVLAAL
Trigger: TAGTGCTGCTAATACTTCTCAGACAAACCCACAGGG...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGACTGCCTTTGCAGCCCTaGAACTGTGCTAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGLPLQP*NCARNC
Trigger: GCAGTTTCTAGCACAGTTTCAGGGCTGCAAAGGCAG...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGGAGCACATTTACAGCTaGAGGATGGTTTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGEHIYS*RMVCTV
Trigger: TACTGTGCAAACCATCCTTCAGCTGTAAATGTGCTC...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCCATCACTGTGCTGAGTaGGCACATTTACAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLHHCAE*AHLQLK
Trigger: CTTCAGCTGTAAATGTGCTCACTCAGCACAGTGATG...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCGGGCTCGATGCACCTTaGTTTTCCATGAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLGLDAP*FSMNCS
Trigger: GGAACAATTCATGGAAAATCAAGGTGCATCGAGCCC...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGGGTTTGTTGTTAAAATaGGGATACCTGGGCTCGATG +
Preference number: 4 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVGLLLK*GYLGSM
Trigger: CATCGAGCCCAGGTATCCTCATTTTAACAACAAACC...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAGAGCCATGGCCTTGTTaGAAATTTGCGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGEPWPC*KFALVQ
Trigger: CTGCACCAGCGCAAATTTTCAACAAGGCCATGGCTC...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAGGCTCTTTTCTTCCATaGTGGTCTGGCCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGGSFLP*WSGRCF
Trigger: GAAGCAACGGCCAGACCATCATGGAAGAAAAGAGCC...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGACATTTCAAGATGCCCTaGAGGCACACTCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGHFKMP*RHTPPS
Trigger: ACTGGGTGGAGTGTGCCTTCAGGGCATCTTGAAATG...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCTTTATTGCAAGCCATTaGCTAACCACAGAATGGGCA +
Preference number: 4 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFFIASH*LTTEWA
Trigger: TGCCCATTCTGTGGTTAGTCAATGGCTTGCAATAAA...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCCCTACTAGTTCCAACTaGGCAGCTAAATATGCAAAG +
Preference number: 4 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFPTSSN*AAKYAK
Trigger: CTTTGCATATTTAGCTGCTCAGTTGGAACTAGTAGG...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370622.5
CDS-3UTR GCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTTTCTCCCATTTAATGTaGCTTCCCACCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSFSHLM*LPTSLL
Trigger: AAGGAGGCTGGTGGGAAGGCACATTAAATGGGAGAA...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTATCTTCTCCTTCCCATaGCTGAATAGGTTCGGACAG +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSIFSFP*LNRFGQ
Trigger: CTGTCCGAACCTATTCAGGCATGGGAAGGAGAAGAT...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTATCTTCTCCTTCCCATaGCTGAATAGGTTCGGACAG +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAIFSFP*LNRFGQ
Trigger: CTGTCCGAACCTATTCAGGCATGGGAAGGAGAAGAT...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTCACATGCTCCATACTaGACCATTACTTGTGACATA +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLSHAPY*TITCDI
Trigger: TATGTCACAAGTAATGGTGCAGTATGGAGCATGTGA...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGGAAAATTTGCGCTGGTaGAGTAGGCTTCGATCACTT +
Preference number: 4 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVENLRW*SRLRSL
Trigger: AAGTGATCGAAGCCTACTGCACCAGCGCAAATTTTC...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGGAAAATTTGCGCTGGTaGAGTAGGCTTCGATCACTT +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGENLRW*SRLRSL
Trigger: AAGTGATCGAAGCCTACTGCACCAGCGCAAATTTTC...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGTGACCAGAGCTTCTaGCCCCCTGAGTTACAATTT +
Preference number: 4 (lower is better)
Translates to: LASISSDLPHLAKFLLSFGDQSF*PPELQF
Trigger: AAATTGTAACTCAGGGGGGCAGAAGCTCTGGTCACC...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTTTACCTAGGTTGGAGTaGAGTGGTGTCATCACAGCT +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHILPRLE*SGVITA
Trigger: AGCTGTGATGACACCACTGCACTCCAACCTAGGTAA...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTGGATGGTGTAATTTCTaGTGTGCAGCAAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAGWCNF*CAASRQ
Trigger: TTGTCTGCTTGCTGCACAGCAGAAATTACACCATCC...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTGCATGGTTACCACTCTaGACAAGCTTCGTTATCCAG +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSAWLPL*TSFVIQ
Trigger: CTGGATAACGAAGCTTGTGCAGAGTGGTAACCATGC...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGACAGTCAGCTTCAGTTTaGGGATCCAGACAAAACTTT +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRQSASV*GSRQNF
Trigger: AAAGTTTTGTCTGGATCCCCAAACTGAAGCTGACTG...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS-3UTR CCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCAGAAACTGCTCCCTGTaGGTTTGTCTGAGAAGTATT +
Preference number: 4 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFRNCSL*VCLRSI
Trigger: AATACTTCTCAGACAAACCCACAGGGAGCAGTTTCT...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGGTTGAAAATTTGCGCTaGTGCAGTAGGCTTCGATCA +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGVENLR*CSRLRS
Trigger: TGATCGAAGCCTACTGCACCAGCGCAAATTTTCAAC...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTTTGAGGTCTTGCTACTaGACTCGCCTCGAATACACT +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSLRSCY*TRLEYT
Trigger: AGTGTATTCGAGGCGAGTCCAGTAGCAAGACCTCAA...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGGGGGCCCTTTTGTTCTaGATGTACAAGTTGGACCAG +
Preference number: 4 (lower is better)
Translates to: KKPIMQWEKAVNSATKREGALLF*MYKLDQ
Trigger: CTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCC...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAGGCTCCTCAGCAAGCTaGGGGTTTCAAACTTCAAGT +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKGSSAS*GFQTSS
Trigger: ACTTGAAGTTTGAAACCCCCAGCTTGCTGAGGAGCC...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGATCCATTTCCTGTGGATaGTGTAATTTCTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRSISCG*CNFCCA
Trigger: TGCACAGCAGAAATTACACCATCCACAGGAAATGGA...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGACGGCTGTGTGTGGTTaGCTGATGTTGGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: KKPIMQWEKAVNSATKRETAVCG*LMLDCK
Trigger: TTTGCAGTCCAACATCAGCCAACCACACACAGCCGT...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGAAACACGGCTGTGTGTaGTTGGCTGATGTTGGACTG +
Preference number: 4 (lower is better)
Translates to: KKPIMQWEKAVNSATKREKHGCV*LADVGL
Trigger: CAGTCCAACATCAGCCAACCACACACAGCCGTGTTT...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR CAA 72 bp GCAGACAACAGCCCTGTACCATGTAGCTATGGGACCTaGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ADNSPVPCSYGT*RLSVPKIKRAP
Trigger: AGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCCATAGCTACATGGTACAGGGCTGTTGTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTTTCTGGATTCATTACTaGGGACGGTACACTCCAAAC +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAFWIHY*GRYTPN
Trigger: GTTTGGAGTGTACCGTCCTCAGTAATGAATCCAGAA...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS-3UTR TCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAACAGTTTCAAATCCTTTaGCGGCTTTTGGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKQFQIL*RLLGRE
Trigger: CTCTCTCCCCAAAAGCCGTCAAAGGATTTGAAACTG...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGCATCACTGTGCTGAGTaGGCACATTTACAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KKPIMQWEKAVNSATKREHHCAE*AHLQLK
Trigger: CTTCAGCTGTAAATGTGCTCACTCAGCACAGTGATG...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGGGGCTCGATGCACCTTaGTTTTCCATGAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEGLDAP*FSMNCS
Trigger: GGAACAATTCATGGAAAATCAAGGTGCATCGAGCCC...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGGAGCTAAAAGAAGAATaGGCACTACATGATGACGAT +
Preference number: 4 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGELKEE*ALHDDD
Trigger: ATCGTCATCATGTAGTGCTCATTCTTCTTTTAGCTC...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAGAGCTAAAAGAAGAATaGGCACTACATGATGACGAT +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRELKEE*ALHDDD
Trigger: ATCGTCATCATGTAGTGCTCATTCTTCTTTTAGCTC...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGATCACTTTAAGGATTTaGGCATCCTCTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGITLRI*ASSSRA
Trigger: TGCTCTGGAAGAGGATGCTCAAATCCTTAAAGTGAT...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTTGGTTATGGAAGAATTaGGGTCTTGCTACTGGACTC +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSWLWKN*GLATGL
Trigger: GAGTCCAGTAGCAAGACCTCAATTCTTCCATAACCA...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTTCCAGTAGAATTTGCTaGTGGATTTGGTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPASSRIC*WIWCWC
Trigger: ACACCAACACCAAATCCATCAGCAAATTCTACTGGA...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGTCCAGTAGAATTTGCTaGTGGATTTGGTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGSSRIC*WIWCWC
Trigger: ACACCAACACCAAATCCATCAGCAAATTCTACTGGA...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTGTAGCTATGGGACCTTaGGACTCTCAGTACCAAAAA +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSVAMGP*DSQYQK
Trigger: TTTTTGGTACTGAGAGTCTCAAGGTCCCATAGCTAC...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTCTGTGTGTGGTTGGCTaGTGTTGGACTGCAAAAATA +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSLCVVG*CWTAKI
Trigger: TATTTTTGCAGTCCAACATCAGCCAACCACACACAG...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTCAGAATGGGCAGATGTaGAGATCTGTGTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIQNGQM*RSVLML
Trigger: CAACATCAACACAGATCTTCACATCTGCCCATTCTG...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCCAACCTCCTACTTTGTaGTGGTTTTCTGGAAACTTT +
Preference number: 4 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFQPPTL*WFSGNF
Trigger: AAAGTTTCCAGAAAACCAGCACAAAGTAGGAGGTTG...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTGATACCTGGGCTCGATaGACCTTGATTTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIDTWAR*TLIFHE
Trigger: TTCATGGAAAATCAAGGTGCATCGAGCCCAGGTATC...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTGATACCTGGGCTCGATaGACCTTGATTTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSADTWAR*TLIFHE
Trigger: TTCATGGAAAATCAAGGTGCATCGAGCCCAGGTATC...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTGCCGTTCTAACTCTTaGAAGAGAGTAACATATTTC +
Preference number: 4 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLCRSNS*KRVTYF
Trigger: GAAATATGTTACTCTCTTGCAAGAGTTAGAACGGCA...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGATCACATGCTCCATACTaGACCATTACTTGTGACATA +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRSHAPY*TITCDI
Trigger: TATGTCACAAGTAATGGTGCAGTATGGAGCATGTGA...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGATCAGTCTGTTCAGCTaGTCCAACCATTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KKPIMQWEKAVNSATKREISLFS*SNHSWK
Trigger: CTTCCAGGAATGGTTGGAGCAGCTGAACAGACTGAT...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAGCCTTGTTGAAAATTTaGGCTGGTGCAGTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKALLKI*AGAVGF
Trigger: GAAGCCTACTGCACCAGCGCAAATTTTCAACAAGGC...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGCCTTGTTGAAAATTTaGGCTGGTGCAGTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LASISSDLPHLAKFLLSFALLKI*AGAVGF
Trigger: GAAGCCTACTGCACCAGCGCAAATTTTCAACAAGGC...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAGGTGACCAGAGCTTCTaGCCCCCTGAGTTACAATTT +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGGDQSF*PPELQF
Trigger: AAATTGTAACTCAGGGGGGCAGAAGCTCTGGTCACC...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGATATTTCTGCAAATACTaGTTAGAGTCCCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRYFCKY*LESHPK
Trigger: CTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATA...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGCTGAATTTGGATGTGTaGTGTTCTGTGACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVLNLDV*CSVTVF
Trigger: GAAGACAGTCACAGAACAGCACACATCCAAATTCAG...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAATTACCTAGGTTGGAGTaGAGTGGTGTCATCACAGCT +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKLPRLE*SGVITA
Trigger: AGCTGTGATGACACCACTGCACTCCAACCTAGGTAA...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGGCATGGTTACCACTCTaGACAAGCTTCGTTATCCAG +
Preference number: 4 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEAWLPL*TSFVIQ
Trigger: CTGGATAACGAAGCTTGTGCAGAGTGGTAACCATGC...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAAAATATGCAAAGCTTTaGCTAGCGGAAACTGATGGA +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRKYAKL*LAETDG
Trigger: TCCATCAGTTTCCGCTAGGCAAAGCTTTGCATATTT...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370622.5
CDS-3UTR CCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGAGAAACTGCTCCCTGTaGGTTTGTCTGAGAAGTATT +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGRNCSL*VCLRSI
Trigger: AATACTTCTCAGACAAACCCACAGGGAGCAGTTTCT...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGACACCGTTCCTGCTATTaGTATTTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRHRSCY*YFSLID
Trigger: ATCTATCAGGGAAAAATACCAATAGCAGGAACGGTG...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCTGGTTGTTGTTACAATaGACCACAATTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFWLLLQ*TTILST
Trigger: AGTGGAGAGAATTGTGGTCCATTGTAACAACAACCA...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTCATTCCTGGAAGTCCTaGTTGTTGTTACAATGGACC +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIHSWKS*LLLQWT
Trigger: GGTCCATTGTAACAACAACCAGGACTTCCAGGAATG...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTTGCTCCAACCATTCCTaGAAGTCCTGGTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSACSNHS*KSWLLL
Trigger: TAACAACAACCAGGACTTCCAGGAATGGTTGGAGCA...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAGTAGGACTTGTGGAATaGAATCTTTTCGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRVGLVE*NLFEYL
Trigger: CAAGTACTCGAAAAGATTCCATTCCACAAGTCCTAC...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAATCTTCCATGATGGTCTaGCCGTTGCTTCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKSSMMV*PLLLVS
Trigger: AGAAACCAGAAGCAACGGCCAGACCATCATGGAAGA...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGTTGAGGTCTTGCTACTaGACTCGCCTCGAATACACT +
Preference number: 4 (lower is better)
Translates to: SWTRSIFLQILLRVPPKELRSCY*TRLEYT
Trigger: AGTGTATTCGAGGCGAGTCCAGTAGCAAGACCTCAA...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGGGGCAGCTGGATCATTaGGCAGATGTGTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEGQLDH*ADVFVF
Trigger: AAAGACAAACACATCTGCCCAATGATCCAGCTGCCC...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGATCTGGATGTACAAGTTaGACCAGAAGCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRSGCTS*TRSIFL
Trigger: CAGAAATATGCTTCTGGTCCAACTTGTACATCCAGA...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGACACAGTTCTAGTTTCTaGGATAAAGTGGATGATGTG +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRHSSSF*DKVDDV
Trigger: CACATCATCCACTTTATCCCAGAAACTAGAACTGTG...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAACGGCTGTGTGTGGTTaGCTGATGTTGGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGTAVCG*LMLDCK
Trigger: TTTGCAGTCCAACATCAGCCAACCACACACAGCCGT...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGACAGTTTCAAATCCTTTaGCGGCTTTTGGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGQFQIL*RLLGRE
Trigger: CTCTCTCCCCAAAAGCCGTCAAAGGATTTGAAACTG...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTCACCTTGATTTTCCATaGATTGTTCCAACTCATCAC +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAHLDFP*IVPTHH
Trigger: GTGATGAGTTGGAACAATTCATGGAAAATCAAGGTG...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGACTGCACCATTACTTGTaGCATAAAAATCACATTTCC +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRLHHYL*HKNHIS
Trigger: GGAAATGTGATTTTTATGTCACAAGTAATGGTGCAG...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTCCACTGTGTTACCAGTaGTTTCAAATGTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAPLCYQ*FQMCSH
Trigger: ATGACTGCACATTTGAAATCACTGGTAACACAGTGG...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTATCACTTTAAGGATTTaGGCATCCTCTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAITLRI*ASSSRA
Trigger: TGCTCTGGAAGAGGATGCTCAAATCCTTAAAGTGAT...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTATCTTTTCGAGTACTTaGGCCATGGCCTTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIIFSST*AMALLK
Trigger: TTTCAACAAGGCCATGGCTCAAGTACTCGAAAAGAT...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTATCTTTTCGAGTACTTaGGCCATGGCCTTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSIFSST*AMALLK
Trigger: TTTCAACAAGGCCATGGCTCAAGTACTCGAAAAGAT...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGTGGTTATGGAAGAATTaGGGTCTTGCTACTGGACTC +
Preference number: 4 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEWLWKN*GLATGL
Trigger: GAGTCCAGTAGCAAGACCTCAATTCTTCCATAACCA...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTTCCAGTAGAATTTGCTaGTGGATTTGGTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHISSRIC*WIWCWC
Trigger: ACACCAACACCAAATCCATCAGCAAATTCTACTGGA...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTAACTTTCAATGGCGCTaGATTTGGATGTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSANFQWR*IWMCAV
Trigger: AACAGCACACATCCAAATTCAGCGCCATTGAAAGTT...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGTAGCTATGGGACCTTaGGACTCTCAGTACCAAAAA +
Preference number: 4 (lower is better)
Translates to: LASISSDLPHLAKFLLSFVAMGP*DSQYQK
Trigger: TTTTTGGTACTGAGAGTCTCAAGGTCCCATAGCTAC...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGGTGTCTGTTGAAATGTaGATACTTCCTCGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVVSVEM*ILPRSF
Trigger: GAAACTTCGAGGAAGTATGCACATTTCAACAGACAC...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGTGCCGTTCTAACTCTTaGAAGAGAGTAACATATTTC +
Preference number: 4 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGCRSNS*KRVTYF
Trigger: GAAATATGTTACTCTCTTGCAAGAGTTAGAACGGCA...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAATCAGTCTGTTCAGCTaGTCCAACCATTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGISLFS*SNHSWK
Trigger: CTTCCAGGAATGGTTGGAGCAGCTGAACAGACTGAT...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAGAAAATTTGCGCTGGTaGAGTAGGCTTCGATCACTT +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKENLRW*SRLRSL
Trigger: AAGTGATCGAAGCCTACTGCACCAGCGCAAATTTTC...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTTATTTCTGCAAATACTaGTTAGAGTCCCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAYFCKY*LESHPK
Trigger: CTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATA...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTTGGCTGATGTTGGACTaGAAAAATAGTCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAWLMLD*KNSPFP
Trigger: AGGAAATGGACTATTTTTGCAGTCCAACATCAGCCA...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTCAAGTCCCCGAAACATaGATATGTACTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIQVPET*ICTHHC
Trigger: ACAGTGATGAGTACATATGCATGTTTCGGGGACTTG...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAACAACTATGGCGACACTaGTCTCAGATTAACATGGCT +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKQLWRH*SQINMA
Trigger: AGCCATGTTAATCTGAGAGCAGTGTCGCCATAGTTG...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTTACTCAGATTGTTATTaGACTGCAGGGGTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAYSDCY*TAGVLS
Trigger: ACTTAAGACCCCTGCAGTCCAATAACAATCTGAGTA...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAACTCCAGTCGCATGAATaGTTTGCTGAGGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKLQSHE*FAEVCC
Trigger: ACAACAAACCTCAGCAAACCATTCATGCGACTGGAG...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGAATATCCTGATGATCTaGATGAGTATCCTCCATATG +
Preference number: 4 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGNILMI*MSILHM
Trigger: CATATGGAGGATACTCATCCAGATCATCAGGATATT...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAAATATCCTGATGATCTaGATGAGTATCCTCCATATG +
Preference number: 4 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRNILMI*MSILHM
Trigger: CATATGGAGGATACTCATCCAGATCATCAGGATATT...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGCACCGTTCCTGCTATTaGTATTTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVHRSCY*YFSLID
Trigger: ATCTATCAGGGAAAAATACCAATAGCAGGAACGGTG...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGTGCTCCAACCATTCCTaGAAGTCCTGGTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: KKPIMQWEKAVNSATKRECSNHS*KSWLLL
Trigger: TAACAACAACCAGGACTTCCAGGAATGGTTGGAGCA...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAATGCTCCAACCATTCCTaGAAGTCCTGGTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKCSNHS*KSWLLL
Trigger: TAACAACAACCAGGACTTCCAGGAATGGTTGGAGCA...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTATGACGATGAGGTTTTaGATAATGAACTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAMTMRF*IMNCKR
Trigger: CCTCTTGCAGTTCATTATCCAAAACCTCATCGTCAT...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGGTTGAAAATTTGCGCTaGTGCAGTAGGCTTCGATCA +
Preference number: 4 (lower is better)
Translates to: KKPIMQWEKAVNSATKREVENLR*CSRLRS
Trigger: TGATCGAAGCCTACTGCACCAGCGCAAATTTTCAAC...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGGTAGGACTTGTGGAATaGAATCTTTTCGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGVGLVE*NLFEYL
Trigger: CAAGTACTCGAAAAGATTCCATTCCACAAGTCCTAC...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGGTAGGACTTGTGGAATaGAATCTTTTCGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVVGLVE*NLFEYL
Trigger: CAAGTACTCGAAAAGATTCCATTCCACAAGTCCTAC...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTGACCTTTTAAGTAACTaGCCTGCATTCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSADLLSN*PAFPFS
Trigger: AGAGAAAGGGAATGCAGGCCAGTTACTTAAAAGGTC...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTGACCTTTTAAGTAACTaGCCTGCATTCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIDLLSN*PAFPFS
Trigger: AGAGAAAGGGAATGCAGGCCAGTTACTTAAAAGGTC...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTACATTTAATAAGCCTTaGCCAGCTGCTTTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LASISSDLPHLAKFLLSFTFNKP*PAALQG
Trigger: CCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGT...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAACATTTAATAAGCCTTaGCCAGCTGCTTTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKTFNKP*PAALQG
Trigger: CCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGT...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGCACAGTTCTAGTTTCTaGGATAAAGTGGATGATGTG +
Preference number: 4 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVHSSSF*DKVDDV
Trigger: CACATCATCCACTTTATCCCAGAAACTAGAACTGTG...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCTCCATTTCCTGTGGATaGTGTAATTTCTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLSISCG*CNFCCA
Trigger: TGCACAGCAGAAATTACACCATCCACAGGAAATGGA...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTTCCATTTCCTGTGGATaGTGTAATTTCTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSASISCG*CNFCCA
Trigger: TGCACAGCAGAAATTACACCATCCACAGGAAATGGA...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAGTACCTTGGAGAAATTaGCCCCTGAATAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKVPWRN*PLNKGH
Trigger: ATGACCTTTATTCAGGGGTCAATTTCTCCAAGGTAC...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAGTCCCCCTTACAAACTaGCAGTTCATCCTCATTAGT +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGVPLTN*QFILIS
Trigger: ACTAATGAGGATGAACTGTCAGTTTGTAAGGGGGAC...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAGAGCACATTTACAGCTaGAGGATGGTTTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGEHIYS*RMVCTV
Trigger: TACTGTGCAAACCATCCTTCAGCTGTAAATGTGCTC...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAGGTTTGTTGTTAAAATaGGGATACCTGGGCTCGATG +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGGLLLK*GYLGSM
Trigger: CATCGAGCCCAGGTATCCTCATTTTAACAACAAACC...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGCCACTGTGTTACCAGTaGTTTCAAATGTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: KKPIMQWEKAVNSATKREPLCYQ*FQMCSH
Trigger: ATGACTGCACATTTGAAATCACTGGTAACACAGTGG...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGATGGTTATGGAAGAATTaGGGTCTTGCTACTGGACTC +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGWLWKN*GLATGL
Trigger: GAGTCCAGTAGCAAGACCTCAATTCTTCCATAACCA...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTTTTATTGCAAGCCATTaGCTAACCACAGAATGGGCA +
Preference number: 4 (lower is better)
Translates to: LASISSDLPHLAKFLLSFFIASH*LTTEWA
Trigger: TGCCCATTCTGTGGTTAGTCAATGGCTTGCAATAAA...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTCAACCTCCTACTTTGTaGTGGTTTTCTGGAAACTTT +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAQPPTL*WFSGNF
Trigger: AAAGTTTCCAGAAAACCAGCACAAAGTAGGAGGTTG...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGCATGAGAGTTTTGAATaGTACGATTGCTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGHESFE*YDCFQN
Trigger: ATTCTGAAAGCAATCGTAGCATTCAAAACTCTCATG...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTTCACATGCTCCATACTaGACCATTACTTGTGACATA +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSASHAPY*TITCDI
Trigger: TATGTCACAAGTAATGGTGCAGTATGGAGCATGTGA...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGCTGAATTTGGATGTGTaGTGTTCTGTGACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SWTRSIFLQILLRVPPKELNLDV*CSVTVF
Trigger: GAAGACAGTCACAGAACAGCACACATCCAAATTCAG...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTTGGCTGATGTTGGACTaGAAAAATAGTCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAWLMLD*KNSPFP
Trigger: AGGAAATGGACTATTTTTGCAGTCCAACATCAGCCA...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCTGGCTGATGTTGGACTaGAAAAATAGTCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLWLMLD*KNSPFP
Trigger: AGGAAATGGACTATTTTTGCAGTCCAACATCAGCCA...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAACAAGTCCCCGAAACATaGATATGTACTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKQVPET*ICTHHC
Trigger: ACAGTGATGAGTACATATGCATGTTTCGGGGACTTG...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCCACGGACATAATTACTaGGGAACCAGCCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGHGHNY*GTSLFS
Trigger: GGAGAACAGGCTGGTTCCCCAGTAATTATGTCCGTG...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCTCCTTTGACGGCTTTTaGGGAGAGAGGTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGSFDGF*GERSLT
Trigger: AGTGAGAGACCTCTCTCCCCAAAAGCCGTCAAAGGA...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGACTCCAGTCGCATGAATaGTTTGCTGAGGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGLQSHE*FAEVCC
Trigger: ACAACAAACCTCAGCAAACCATTCATGCGACTGGAG...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTCACCGTTCCTGCTATTaGTATTTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIHRSCY*YFSLID
Trigger: ATCTATCAGGGAAAAATACCAATAGCAGGAACGGTG...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTTGGTTGTTGTTACAATaGACCACAATTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIWLLLQ*TTILST
Trigger: AGTGGAGAGAATTGTGGTCCATTGTAACAACAACCA...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGACATTCCTGGAAGTCCTaGTTGTTGTTACAATGGACC +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGHSWKS*LLLQWT
Trigger: GGTCCATTGTAACAACAACCAGGACTTCCAGGAATG...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCATGACGATGAGGTTTTaGATAATGAACTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLMTMRF*IMNCKR
Trigger: CCTCTTGCAGTTCATTATCCAAAACCTCATCGTCAT...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTTCTGGATGTACAAGTTaGACCAGAAGCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHISGCTS*TRSIFL
Trigger: CAGAAATATGCTTCTGGTCCAACTTGTACATCCAGA...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAGTACCTTGGAGAAATTaGCCCCTGAATAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGVPWRN*PLNKGH
Trigger: ATGACCTTTATTCAGGGGTCAATTTCTCCAAGGTAC...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCCAGTTTCAAATCCTTTaGCGGCTTTTGGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGQFQIL*RLLGRE
Trigger: CTCTCTCCCCAAAAGCCGTCAAAGGATTTGAAACTG...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGGAGCTAAAAGAAGAATaGGCACTACATGATGACGAT +
Preference number: 4 (lower is better)
Translates to: KKPIMQWEKAVNSATKREELKEE*ALHDDD
Trigger: ATCGTCATCATGTAGTGCTCATTCTTCTTTTAGCTC...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTATAAAGTGGATGATGTaGTTCAATGAGCAACTTGAG +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSIKWMM*FNEQLE
Trigger: CTCAAGTTGCTCATTGAATCACATCATCCACTTTAT...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTATAAAGTGGATGATGTaGTTCAATGAGCAACTTGAG +
Preference number: 4 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAIKWMM*FNEQLE
Trigger: CTCAAGTTGCTCATTGAATCACATCATCCACTTTAT...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGATTTATTGCAAGCCATTaGCTAACCACAGAATGGGCA +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGFIASH*LTTEWA
Trigger: TGCCCATTCTGTGGTTAGTCAATGGCTTGCAATAAA...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCTTCTCCCATTTAATGTaGCTTCCCACCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGFSHLM*LPTSLL
Trigger: AAGGAGGCTGGTGGGAAGGCACATTAAATGGGAGAA...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGGTGTCTGTTGAAATGTaGATACTTCCTCGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEVSVEM*ILPRSF
Trigger: GAAACTTCGAGGAAGTATGCACATTTCAACAGACAC...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGCAACCTCCTACTTTGTaGTGGTTTTCTGGAAACTTT +
Preference number: 4 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEQPPTL*WFSGNF
Trigger: AAAGTTTCCAGAAAACCAGCACAAAGTAGGAGGTTG...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTCATGAGAGTTTTGAATaGTACGATTGCTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAHESFE*YDCFQN
Trigger: ATTCTGAAAGCAATCGTAGCATTCAAAACTCTCATG...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGTATTTCTGCAAATACTaGTTAGAGTCCCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEYFCKY*LESHPK
Trigger: CTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATA...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGACTGAATTTGGATGTGTaGTGTTCTGTGACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGLNLDV*CSVTVF
Trigger: GAAGACAGTCACAGAACAGCACACATCCAAATTCAG...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTCCTATAGATGCAGTTTaGACATTTATTGCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIPIDAV*TFIASH
Trigger: ATGGCTTGCAATAAATGTGCAAACTGCATCTATAGG...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGACAAGTCCCCGAAACATaGATATGTACTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGQVPET*ICTHHC
Trigger: ACAGTGATGAGTACATATGCATGTTTCGGGGACTTG...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGTACTCAGATTGTTATTaGACTGCAGGGGTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEYSDCY*TAGVLS
Trigger: ACTTAAGACCCCTGCAGTCCAATAACAATCTGAGTA...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGTACTCAGATTGTTATTaGACTGCAGGGGTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: KKPIMQWEKAVNSATKREYSDCY*TAGVLS
Trigger: ACTTAAGACCCCTGCAGTCCAATAACAATCTGAGTA...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAATGACGATGAGGTTTTaGATAATGAACTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKMTMRF*IMNCKR
Trigger: CCTCTTGCAGTTCATTATCCAAAACCTCATCGTCAT...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAGACCTTTTAAGTAACTaGCCTGCATTCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGDLLSN*PAFPFS
Trigger: AGAGAAAGGGAATGCAGGCCAGTTACTTAAAAGGTC...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
3UTR CAA 72 bp TCCTATAGATGCAGTTTGCACATTTATTGCAAGCCATaGACTAACCACAGAATGGGCAGATGTGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: SYRCSLHIYCKP*TNHRMGRCEDL
Trigger: CAGATCTTCACATCTGCCCATTCTGTGGTTAGTCAATGGCTTGCAATAAATGTGCAAACTGCATCTATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGACACCTTGATTTTCCATaGATTGTTCCAACTCATCAC +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGHLDFP*IVPTHH
Trigger: GTGATGAGTTGGAACAATTCATGGAAAATCAAGGTG...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAACTGCACCATTACTTGTaGCATAAAAATCACATTTCC +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKLHHYL*HKNHIS
Trigger: GGAAATGTGATTTTTATGTCACAAGTAATGGTGCAG...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCCAGAATGGGCAGATGTaGAGATCTGTGTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGQNGQM*RSVLML
Trigger: CAACATCAACACAGATCTTCACATCTGCCCATTCTG...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAGTGTCTGTTGAAATGTaGATACTTCCTCGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGVSVEM*ILPRSF
Trigger: GAAACTTCGAGGAAGTATGCACATTTCAACAGACAC...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGATCAAATATTTCCACTTaGAGGGTTGCACATCCTTTC +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGSNIST*RVAHPF
Trigger: GAAAGGATGTGCAACCCTCCAAGTGGAAATATTTGA...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS-3UTR CCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAATATCCTGATGATCTaGATGAGTATCCTCCATATG +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKNILMI*MSILHM
Trigger: CATATGGAGGATACTCATCCAGATCATCAGGATATT...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCACATTTAATAAGCCTTaGCCAGCTGCTTTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGTFNKP*PAALQG
Trigger: CCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGT...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTGTACTACAGTTTTCTTaGTCTTATAGACAACATAGG +
Preference number: 4 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSVLQFS*SYRQHR
Trigger: CCTATGTTGTCTATAAGACCAAGAAAACTGTAGTAC...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGATCTGGATGTACAAGTTaGACCAGAAGCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGSGCTS*TRSIFL
Trigger: CAGAAATATGCTTCTGGTCCAACTTGTACATCCAGA...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR TCA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAATAAAGTGGATGATGTaGTTCAATGAGCAACTTGAG +
Preference number: 4 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGIKWMM*FNEQLE
Trigger: CTCAAGTTGCTCATTGAATCACATCATCCACTTTAT...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAACATGAGAGTTTTGAATaGTACGATTGCTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKHESFE*YDCFQN
Trigger: ATTCTGAAAGCAATCGTAGCATTCAAAACTCTCATG...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAGTACTACAGTTTTCTTaGTCTTATAGACAACATAGG +
Preference number: 4 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKVLQFS*SYRQHR
Trigger: CCTATGTTGTCTATAAGACCAAGAAAACTGTAGTAC...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR GCA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCTGCCGTTCTAACTCTTaGAAGAGAGTAACATATTTC +
Preference number: 4 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGCRSNS*KRVTYF
Trigger: GAAATATGTTACTCTCTTGCAAGAGTTAGAACGGCA...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CCA 90 bp GTCCTCCAGCTGCTCCCTCACTCCAGCCGCGCCGCCGCCGCCTCCTaGAAGCCGTTCGCCCTCCCGAGTCACGGGGCCGGCGAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: VLQLLPHSSRAAAAS*KPFALPSHGAGERA
Trigger: CGCCCGCTCGCCGGCCCCGTGACTCGGGAGGGCGAACGGCTTCCAGGAGGCGGCGGCGGCGCGGCTGGAGTGAGGGAGCAGCTGGAGGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370620.5
CDS-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCACGGCTGTGTGTGGTaGGCTGATGTTGGACTGCAA +
Preference number: 5 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMHGCVW*ADVGLQ
Trigger: TTGCAGTCCAACATCAGCCAACCACACACAGCCGTG...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGCCTTGGCCAGCTGCTTaGCAAGGGCAGCCAGCCCAA +
Preference number: 5 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGPWPAA*QGQPAQ
Trigger: TTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGG...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCTGATGGATTTGGTGTaGGTGTGGGTGACCAGAGCT +
Preference number: 5 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMLMDLV*VWVTRA
Trigger: AGCTCTGGTCACCCACACCAACACCAAATCCATCAG...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGGGCCTTGTTGAAAATTaGCGCTGGTGCAGTAGGCTT +
Preference number: 5 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMGLVEN*RWCSRL
Trigger: AAGCCTACTGCACCAGCGCAAATTTTCAACAAGGCC...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGGCAGTTTCAAATCCTTaGACGGCTTTTGGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMAVSNP*TAFGER
Trigger: TCTCTCCCCAAAAGCCGTCAAAGGATTTGAAACTGC...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATATCCACAGTACTCAGATaGTTATTGGACTGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: SRVPRAPHQKGQVPETCISTVLR*LLDCRG
Trigger: ACCCCTGCAGTCCAATAACAATCTGAGTACTGTGGA...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTGAGGCCACCGTTCCTGCTATaGGTATTTTTCCCTGATAGA +
Preference number: 5 (lower is better)
Translates to: SLGQLLCKGSQPKECDLRPPFLL*VFFPDR
Trigger: TCTATCAGGGAAAAATACCAATAGCAGGAACGGTGG...CCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAAATTTGCTGATGGATTaGGTGTTGGTGTGGGTGACC +
Preference number: 5 (lower is better)
Translates to: SRVPRAPHQKGQVPETCINLLMD*VLVWVT
Trigger: GGTCACCCACACCAACACCAAATCCATCAGCAAATT...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCACCACTTGGTAAGGTaGGCTAAAAGTACTGGGGAA +
Preference number: 5 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMHHLVR*AKSTGE
Trigger: TTCCCCAGTACTTTTAGCCAACCTTACCAAGTGGTG...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAATTCTGATCAGCCCTTaGGCCTCAATTTCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIILISP*ASISSD
Trigger: GTCACTGGAAATTGAGGCCAAAGGGCTGATCAGAAT...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGTGCCCCATGAGAGTTTaGAATGCTACGATTGCTTTC +
Preference number: 5 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMCPMRV*NATIAF
Trigger: GAAAGCAATCGTAGCATTCAAAACTCTCATGGGGCA...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGGATCACTTTAAGGATTaGAGCATCCTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMDHFKD*SILFQS
Trigger: GCTCTGGAAGAGGATGCTCAAATCCTTAAAGTGATC...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTGAGGAATCTTTTCGAGTACTaGAGCCATGGCCTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: SLGQLLCKGSQPKECDLRNLFEY*SHGLVE
Trigger: TTCAACAAGGCCATGGCTCAAGTACTCGAAAAGATT...CCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTGAGGATTGGGCAGATGTGTTaGTCTTTCATCCTACTCAAG +
Preference number: 5 (lower is better)
Translates to: SLGQLLCKGSQPKECDLRIGQMC*SFILLK
Trigger: CTTGAGTAGGATGAAAGACAAACACATCTGCCCAAT...CCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGTGTGGTTGGCTGATGTaGGACTGCAAAAATAGTCCA +
Preference number: 5 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMCGWLM*DCKNSP
Trigger: TGGACTATTTTTGCAGTCCAACATCAGCCAACCACA...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATATGTGGTTGGCTGATGTaGGACTGCAAAAATAGTCCA +
Preference number: 5 (lower is better)
Translates to: SRVPRAPHQKGQVPETCICGWLM*DCKNSP
Trigger: TGGACTATTTTTGCAGTCCAACATCAGCCAACCACA...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGACACGGCTGTGTGTGGTaGGCTGATGTTGGACTGCAA +
Preference number: 5 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRHGCVW*ADVGLQ
Trigger: TTGCAGTCCAACATCAGCCAACCACACACAGCCGTG...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS TCA 90 bp GGAGGTGCAGGTCGTAGACAACTTAAACTCCACGGTTTTATAATTTaGGGAGGCTCCAAGGGTCCTCGGGGCTGTCCGGTAGAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: GGAGRRQLKLHGFII*GGSKGPRGCPVELK
Trigger: TTTTAGCTCTACCGGACAGCCCCGAGGACCCTTGGAGCCTCCTCAAATTATAAAACCGTGGAGTTTAAGTTGTCTACGACCTGCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CCA 90 bp TTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCCACCCAGTaGCACAGTGATGGTTATGGAAGAATTGAGGTCTTGCTACTGGAC +
Preference number: 5 (lower is better)
Translates to: FSGTFQDALKAHSTQ*HSDGYGRIEVLLLD
Trigger: GTCCAGTAGCAAGACCTCAATTCTTCCATAACCATCACTGTGCCACTGGGTGGAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGTCATCTCCACTGTCTTaGACTGCCTTTGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGSSPLS*TAFAAL
Trigger: CAGGGCTGCAAAGGCAGTCAAAGACAGTGGAGATGA...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGAATCTTTTCGAGTACTaGAGCCATGGCCTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMNLFEY*SHGLVE
Trigger: TTCAACAAGGCCATGGCTCAAGTACTCGAAAAGATT...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGACCTTGGCCAGCTGCTTaGCAAGGGCAGCCAGCCCAA +
Preference number: 5 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGPWPAA*QGQPAQ
Trigger: TTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGG...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGAGGGCAGCTGGATCATaGGGCAGATGTGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLRAAGS*GRCVCL
Trigger: AAGACAAACACATCTGCCCAATGATCCAGCTGCCCT...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGCTGATGGATTTGGTGTaGGTGTGGGTGACCAGAGCT +
Preference number: 5 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGLMDLV*VWVTRA
Trigger: AGCTCTGGTCACCCACACCAACACCAAATCCATCAG...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAATGTGACCTGAGGTTCTGGATGTACAAGTaGGACCAGAAGCATATTTCT +
Preference number: 5 (lower is better)
Translates to: SLGQLLCKGSQPKECDLRFWMYK*DQKHIS
Trigger: AGAAATATGCTTCTGGTCCAACTTGTACATCCAGAA...CCTCAGGTCACATTCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAAAGCCATGTCACGATTaGTTCTTCTGGATTCATTAC +
Preference number: 5 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIKPCHD*FFWIHY
Trigger: GTAATGAATCCAGAAGAACAAATCGTGACATGGCTT...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS-3UTR CAA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTTCATCTCCACTGTCTTaGACTGCCTTTGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPASSPLS*TAFAAL
Trigger: CAGGGCTGCAAAGGCAGTCAAAGACAGTGGAGATGA...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTTATCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGGGTTTTCTGGAAACTTaGAACATTCTTCCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: VIQSTEGPSSEGPSPRNMGFLET*NILPRL
Trigger: AAGCCTTGGAAGAATGTTCAAAGTTTCCAGAAAACC...CATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCCAGAGTACCGAGGGCCCCTCATCAGAAGGGCCAAGTCCCCGAAACATGCATAGGTTTTCTGGAAACTTaGAACATTCTTCCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: SRVPRAPHQKGQVPETCIGFLET*NILPRL
Trigger: AAGCCTTGGAAGAATGTTCAAAGTTTCCAGAAAACC...TATGCATGTTTCGGGGACTTGGCCCTTCTGATGAGGGGCCCTCGGTACTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTCACGGCTGTGTGTGGTaGGCTGATGTTGGACTGCAA +
Preference number: 5 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAHGCVW*ADVGLQ
Trigger: TTGCAGTCCAACATCAGCCAACCACACACAGCCGTG...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS TCA 90 bp TGCAGCCCTGAAACTGTGCTAGAAACTGCTCCCTGTGGGTTTGTCTaGGAAGTATTAGCAGCACTAAGAGAAGAGGAACGTCCACATGGT +
Preference number: 5 (lower is better)
Translates to: CSPETVLETAPCGFV*EVLAALREEERPHG
Trigger: ACCATGTGGACGTTCCTCTTCTCTTAGTGCTGCTAATACTTCTCAGACAAACCCACAGGGAGCAGTTTCTAGCACAGTTTCAGGGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS TCA 90 bp GAGCAAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTaGAGGCACACTCCACCCAGTGGCACAGTGATGGTTATGGAAGAA +
Preference number: 5 (lower is better)
Translates to: EQTESNHSAGHFKMP*RHTPPSGTVMVMEE
Trigger: TTCTTCCATAACCATCACTGTGCCACTGGGTGGAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CCA 90 bp CCCAGTGGCACAGTGATGGTTATGGAAGAATTGAGGTCTTGCTACTaGACTCGCCTCGAATACACTCATCTGTTTGCTTCAAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: PSGTVMVMEELRSCY*TRLEYTHLFASKAS
Trigger: GGAGGCTTTTGAAGCAAACAGATGAGTGTATTCGAGGCGAGTCCAGTAGCAAGACCTCAATTCTTCCATAACCATCACTGTGCCACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCGCAGTCAGCTTCAGTTaGGGGATCCAGACAAAACTT +
Preference number: 5 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFAVSFS*GIQTKL
Trigger: AAGTTTTGTCTGGATCCCCAAACTGAAGCTGACTGC...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS-3UTR CAA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGATCCACAGTACTCAGATaGTTATTGGACTGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRSTVLR*LLDCRG
Trigger: ACCCCTGCAGTCCAATAACAATCTGAGTACTGTGGA...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTGCCCCATGAGAGTTTaGAATGCTACGATTGCTTTC +
Preference number: 5 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLCPMRV*NATIAF
Trigger: GAAAGCAATCGTAGCATTCAAAACTCTCATGGGGCA...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGATCTCTTCCTCAGATCTaGACATTGCCCCATGAGAGT +
Preference number: 5 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRSLPQI*TLPHES
Trigger: ACTCTCATGGGGCAATGTCAAGATCTGAGGAAGAGA...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGATCCTGGAAGTCCTGGTaGTTGTTACAATGGACCACA +
Preference number: 5 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRSWKSW*LLQWTT
Trigger: TGTGGTCCATTGTAACAACAACCAGGACTTCCAGGA...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTCCACGGTTTTATAATTaGAGGAGGCTCCAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAPRFYN*RRLQGS
Trigger: GGACCCTTGGAGCCTCCTCAAATTATAAAACCGTGG...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCATGATGGTCTGGCCGTaGCTTCTGGTTTCTTCAATG +
Preference number: 5 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFMMVWP*LLVSSM
Trigger: CATTGAAGAAACCAGAAGCAACGGCCAGACCATCAT...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS GCA 90 bp ATTGAGGTCTTGCTACTGGACTCGCCTCGAATACACTCATCTGTTTaGTTCAAAAGCCTCCGCACCAGCTTTTCTAGGTCCCTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: IEVLLLDSPRIHSSV*FKSLRTSFSRSLLD
Trigger: ATCAAGAAGGGACCTAGAAAAGCTGGTGCGGAGGCTTTTGAAGCAAACAGATGAGTGTATTCGAGGCGAGTCCAGTAGCAAGACCTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CCA 90 bp CCTCTGATCAGTCTGTTCAGCTGCTCCAACCATTCCTGGAAGTCCTaGTTGTTGTTACAATGGACCACAATTCTCTCCACTGTGTTACCA +
Preference number: 5 (lower is better)
Translates to: PLISLFSCSNHSWKS*LLLQWTTILSTVLP
Trigger: TGGTAACACAGTGGAGAGAATTGTGGTCCATTGTAACAACAACCAGGACTTCCAGGAATGGTTGGAGCAGCTGAACAGACTGATCAGAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGAGAGTACTCAGTACCTaGGAGAAATTGACCCCTGAA +
Preference number: 5 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGRVLST*EKLTPE
Trigger: TTCAGGGGTCAATTTCTCCAAGGTACTGAGTACTCT...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGGCAGTTTCAAATCCTTaGACGGCTTTTGGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGAVSNP*TAFGER
Trigger: TCTCTCCCCAAAAGCCGTCAAAGGATTTGAAACTGC...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGGTACTCAGATTGTTATaGGACTGCAGGGGTCTTAAG +
Preference number: 5 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGVLRLL*DCRGLK
Trigger: CTTAAGACCCCTGCAGTCCAATAACAATCTGAGTAC...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGGACCTTGAGACTCTCAGTACCAAAAATAAAAAGGGCTCCTCAGCAAGCTGGGCCTCAGATCTTGACATaGCCCCATGAGAGTTTTGAA +
Preference number: 5 (lower is better)
Translates to: GTLRLSVPKIKRAPQQAGPQILT*PHESFE
Trigger: TTCAAAACTCTCATGGGGCAATGTCAAGATCTGAGG...CCCAGCTTGCTGAGGAGCCCTTTTTATTTTTGGTACTGAGAGTCTCAAGGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCCCTCAGATCTTGACATaGCCCCATGAGAGTTTTGAA +
Preference number: 5 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFPQILT*PHESFE
Trigger: TTCAAAACTCTCATGGGGCAATGTCAAGATCTGAGG...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTTCTCTTCCTCAGATCTaGACATTGCCCCATGAGAGT +
Preference number: 5 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPASLPQI*TLPHES
Trigger: ACTCTCATGGGGCAATGTCAAGATCTGAGGAAGAGA...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTGGAAGTCCTGGTTGTaGTTACAATGGACCACAATT +
Preference number: 5 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLWKSWL*LQWTTI
Trigger: AATTGTGGTCCATTGTAACAACAACCAGGACTTCCA...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTCCACGGTTTTATAATTaGAGGAGGCTCCAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAPRFYN*RRLQGS
Trigger: GGACCCTTGGAGCCTCCTCAAATTATAAAACCGTGG...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTCACATTTAATAAGCCTTGGCCAGCTGCTTTGCAAGGGCAGCCAGCCCAAAGAGATCACTTTAAGGATTaGAGCATCCTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: FTFNKPWPAALQGQPAQRDHFKD*SILFQS
Trigger: GCTCTGGAAGAGGATGCTCAAATCCTTAAAGTGATC...TCTTTGGGCTGGCTGCCCTTGCAAAGCAGCTGGCCAAGGCTTATTAAATGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTGGCCTTGTTGAAAATTaGCGCTGGTGCAGTAGGCTT +
Preference number: 5 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSGLVEN*RWCSRL
Trigger: AAGCCTACTGCACCAGCGCAAATTTTCAACAAGGCC...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGGGAAGAATTGAGGTCTaGCTACTGGACTCGCCTCGA +
Preference number: 5 (lower is better)
Translates to: KKPIMQWEKAVNSATKREGRIEV*LLDSPR
Trigger: TCGAGGCGAGTCCAGTAGCAAGACCTCAATTCTTCC...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAGGAAGAATTGAGGTCTaGCTACTGGACTCGCCTCGA +
Preference number: 5 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKGRIEV*LLDSPR
Trigger: TCGAGGCGAGTCCAGTAGCAAGACCTCAATTCTTCC...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGGGAAGAATTGAGGTCTaGCTACTGGACTCGCCTCGA +
Preference number: 5 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEGRIEV*LLDSPR
Trigger: TCGAGGCGAGTCCAGTAGCAAGACCTCAATTCTTCC...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTAGGGCAGCTGGATCATaGGGCAGATGTGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIRAAGS*GRCVCL
Trigger: AAGACAAACACATCTGCCCAATGATCCAGCTGCCCT...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGCACCACTTGGTAAGGTaGGCTAAAAGTACTGGGGAA +
Preference number: 5 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVHHLVR*AKSTGE
Trigger: TTCCCCAGTACTTTTAGCCAACCTTACCAAGTGGTG...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTTCAATGGCGCTGAATTaGGATGTGTGCTGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPASMALN*DVCCSV
Trigger: CACAGAACAGCACACATCCAAATTCAGCGCCATTGA...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGTCAATGGCGCTGAATTaGGATGTGTGCTGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVSMALN*DVCCSV
Trigger: CACAGAACAGCACACATCCAAATTCAGCGCCATTGA...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTTCTCTGTTACCTAGGTaGGAGTGCAGTGGTGTCATC +
Preference number: 5 (lower is better)
Translates to: ATRGALLFWMYKLDQKHISLLPR*ECSGVI
Trigger: GATGACACCACTGCACTCCAACCTAGGTAACAGAGA...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTTCTCTGTTACCTAGGTaGGAGTGCAGTGGTGTCATC +
Preference number: 5 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSASLLPR*ECSGVI
Trigger: GATGACACCACTGCACTCCAACCTAGGTAACAGAGA...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCTGTAGCTATGGGACCTaGAGACTCTCAGTACCAAAA +
Preference number: 5 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFCSYGT*RLSVPK
Trigger: TTTTGGTACTGAGAGTCTCAAGGTCCCATAGCTACA...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS TCA 90 bp CAAAGATATAAGCCATGTCACGATTTGTTCTTCTGGATTCATTACTaGGGACGGTACACTCCAAACAGCACTCTGGGGCAGCTGCAAGGA +
Preference number: 5 (lower is better)
Translates to: QRYKPCHDLFFWIHY*GRYTPNSTLGQLQG
Trigger: TCCTTGCAGCTGCCCCAGAGTGCTGTTTGGAGTGTACCGTCCTCAGTAATGAATCCAGAAGAACAAATCGTGACATGGCTTATATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS GCA 90 bp ACTCCACCCAGTGGCACAGTGATGGTTATGGAAGAATTGAGGTCTTaGTACTGGACTCGCCTCGAATACACTCATCTGTTTGCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: TPPSGTVMVMEELRS*YWTRLEYTHLFASK
Trigger: TTTTGAAGCAAACAGATGAGTGTATTCGAGGCGAGTCCAGTAGCAAGACCTCAATTCTTCCATAACCATCACTGTGCCACTGGGTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTGTACTCAGATTGTTATaGGACTGCAGGGGTCTTAAG +
Preference number: 5 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAVLRLL*DCRGLK
Trigger: CTTAAGACCCCTGCAGTCCAATAACAATCTGAGTAC...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGGTACTCAGATTGTTATaGGACTGCAGGGGTCTTAAG +
Preference number: 5 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVVLRLL*DCRGLK
Trigger: CTTAAGACCCCTGCAGTCCAATAACAATCTGAGTAC...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGTTGGCAGAGTGTCTGTaGAAATGTGCATACTTCCTC +
Preference number: 5 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVLAECL*KCAYFL
Trigger: GAGGAAGTATGCACATTTCAACAGACACTCTGCCAA...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGACATTCTTCCAAGGCTaGGCAGAGTGTCTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVTFFQG*AECLLK
Trigger: TTTCAACAGACACTCTGCCAAGCCTTGGAAGAATGT...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTAGACAACCTCCTACTTaGTGCTGGTTTTCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPARQPPT*CWFSGN
Trigger: GTTTCCAGAAAACCAGCACAAAGTAGGAGGTTGTCT...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTTCTCTTCCTCAGATCTaGACATTGCCCCATGAGAGT +
Preference number: 5 (lower is better)
Translates to: ATRGALLFWMYKLDQKHISLPQI*TLPHES
Trigger: ACTCTCATGGGGCAATGTCAAGATCTGAGGAAGAGA...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCGATGACGATGAGGTTTaGGATAATGAACTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFDDDEV*DNELQE
Trigger: CTCTTGCAGTTCATTATCCAAAACCTCATCGTCATC...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGAATACACTCATCTGTTaGCTTCAAAAGCCTCCGCAC +
Preference number: 5 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVNTLIC*LQKPPH
Trigger: GTGCGGAGGCTTTTGAAGCAAACAGATGAGTGTATT...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGAGGGCAGCTGGATCATaGGGCAGATGTGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: KKPIMQWEKAVNSATKRERAAGS*GRCVCL
Trigger: AAGACAAACACATCTGCCCAATGATCCAGCTGCCCT...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTACTAGAGGGGCCCTTTaGTTCTGGATGTACAAGTTG +
Preference number: 5 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSTRGAL*FWMYKL
Trigger: CAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGT...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGTCTCTGTTACCTAGGTaGGAGTGCAGTGGTGTCATC +
Preference number: 5 (lower is better)
Translates to: SWTRSIFLQILLRVPPKESLLPR*ECSGVI
Trigger: GATGACACCACTGCACTCCAACCTAGGTAACAGAGA...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGTGTAGCTATGGGACCTaGAGACTCTCAGTACCAAAA +
Preference number: 5 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGCSYGT*RLSVPK
Trigger: TTTTGGTACTGAGAGTCTCAAGGTCCCATAGCTACA...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGTGTGGTTGGCTGATGTaGGACTGCAAAAATAGTCCA +
Preference number: 5 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGCGWLM*DCKNSP
Trigger: TGGACTATTTTTGCAGTCCAACATCAGCCAACCACA...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GTGGCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTCCTATAGATGCAGTTaGCACATTTATTGCAAGCCA +
Preference number: 5 (lower is better)
Translates to: VALSLRPTFNGAEFGCVLSYRCS*HIYCKP
Trigger: TGGCTTGCAATAAATGTGCAAACTGCATCTATAGGA...CAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTAGAGTACTCAGTACCTaGGAGAAATTGACCCCTGAA +
Preference number: 5 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIRVLST*EKLTPE
Trigger: TTCAGGGGTCAATTTCTCCAAGGTACTGAGTACTCT...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAGCAGTTTCAAATCCTTaGACGGCTTTTGGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKAVSNP*TAFGER
Trigger: TCTCTCCCCAAAAGCCGTCAAAGGATTTGAAACTGC...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTTTGGCAGAGTGTCTGTaGAAATGTGCATACTTCCTC +
Preference number: 5 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSALAECL*KCAYFL
Trigger: GAGGAAGTATGCACATTTCAACAGACACTCTGCCAA...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GCTACTAGAGGGGCCCTTTTGTTCTGGATGTACAAGTTGGACCAGAAGCATATTAGACAACCTCCTACTTaGTGCTGGTTTTCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: ATRGALLFWMYKLDQKHIRQPPT*CWFSGN
Trigger: GTTTCCAGAAAACCAGCACAAAGTAGGAGGTTGTCT...AATATGCTTCTGGTCCAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTAGACAACCTCCTACTTaGTGCTGGTTTTCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSRQPPT*CWFSGN
Trigger: GTTTCCAGAAAACCAGCACAAAGTAGGAGGTTGTCT...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCCCTCAGATCTTGACATaGCCCCATGAGAGTTTTGAA +
Preference number: 5 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLPQILT*PHESFE
Trigger: TTCAAAACTCTCATGGGGCAATGTCAAGATCTGAGG...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTCACTCATCCGAGGACTaGCAGATAACATTATCAGGA +
Preference number: 5 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSHSSED*QITLSG
Trigger: TCCTGATAATGTTATCTGCAAGTCCTCGGATGAGTG...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTCCACCGTTCCTGCTATaGGTATTTTTCCCTGATAGA +
Preference number: 5 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSPPFLL*VFFPDR
Trigger: TCTATCAGGGAAAAATACCAATAGCAGGAACGGTGG...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTTGGAAGTCCTGGTTGTaGTTACAATGGACCACAATT +
Preference number: 5 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPAWKSWL*LQWTTI
Trigger: AATTGTGGTCCATTGTAACAACAACCAGGACTTCCA...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTTCCTGGAAGTCCTGGTaGTTGTTACAATGGACCACA +
Preference number: 5 (lower is better)
Translates to: LASISSDLPHLAKFLLSFSWKSW*LLQWTT
Trigger: TGTGGTCCATTGTAACAACAACCAGGACTTCCAGGA...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACGGCTGTGTGTGGTTGGCTGATGTTGGACTGCAAAAATAGTCCATTTCCTGTGGATGACGATGAGGTTTaGGATAATGAACTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: TAVCGWLMLDCKNSPFPVDDDEV*DNELQE
Trigger: CTCTTGCAGTTCATTATCCAAAACCTCATCGTCATC...CACAGGAAATGGACTATTTTTGCAGTCCAACATCAGCCAACCACACACAGCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGACCACGGTTTTATAATTaGAGGAGGCTCCAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGPRFYN*RRLQGS
Trigger: GGACCCTTGGAGCCTCCTCAAATTATAAAACCGTGG...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp ACAGGAAAGCCCTGGGGAAAAGTTGGGTTCACATTTAATAAGCCTTGGCCAGCTAATCTTTTCGAGTACTaGAGCCATGGCCTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: TGKPWGKVGFTFNKPWPANLFEY*SHGLVE
Trigger: TTCAACAAGGCCATGGCTCAAGTACTCGAAAAGATT...AGCTGGCCAAGGCTTATTAAATGTGAACCCAACTTTTCCCCAGGGCTTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGATTCTGATCAGCCCTTaGGCCTCAATTTCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: KKPIMQWEKAVNSATKREILISP*ASISSD
Trigger: GTCACTGGAAATTGAGGCCAAAGGGCTGATCAGAAT...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp CCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTGGGGATTTATTGCAAGCCATaGACTAACCACAGAATGGGC +
Preference number: 5 (lower is better)
Translates to: PQFPVTFPIWPNFSCLLGIYCKP*TNHRMG
Trigger: GCCCATTCTGTGGTTAGTCAATGGCTTGCAATAAAT...CCCCAAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GCACTGAGCCTTAGGCCAACTTTCAATGGCGCTGAATTTGGATGTGTGCTGTTCTCCTATAGATGCAGTTaGCACATTTATTGCAAGCCA +
Preference number: 5 (lower is better)
Translates to: ALSLRPTFNGAEFGCVLFSYRCS*HIYCKP
Trigger: TGGCTTGCAATAAATGTGCAAACTGCATCTATAGGA...GAACAGCACACATCCAAATTCAGCGCCATTGAAAGTTGGCCTAAGGCTCAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CCA 90 bp TTCAGCTGCTCCAACCATTCCTGGAAGTCCTGGTTGTTGTTACAATaGACCACAATTCTCTCCACTGTGTTACCAGTGATTTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: FSCSNHSWKSWLLLQ*TTILSTVLPVISNV
Trigger: CACATTTGAAATCACTGGTAACACAGTGGAGAGAATTGTGGTCCATTGTAACAACAACCAGGACTTCCAGGAATGGTTGGAGCAGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTAGTCTGTTGATCAGTTaGCACAGAACTACCCCATTT +
Preference number: 5 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSSLLIS*HRTTPF
Trigger: AAATGGGGTAGTTCTGTGCAAACTGATCAACAGACT...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS-3UTR CAA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGAGAGTACTCAGTACCTaGGAGAAATTGACCCCTGAA +
Preference number: 5 (lower is better)
Translates to: KKPIMQWEKAVNSATKRERVLST*EKLTPE
Trigger: TTCAGGGGTCAATTTCTCCAAGGTACTGAGTACTCT...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGACATTCTTCCAAGGCTaGGCAGAGTGTCTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: SWTRSIFLQILLRVPPKETFFQG*AECLLK
Trigger: TTTCAACAGACACTCTGCCAAGCCTTGGAAGAATGT...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGCCACCGTTCCTGCTATaGGTATTTTTCCCTGATAGA +
Preference number: 5 (lower is better)
Translates to: KKPIMQWEKAVNSATKREPPFLL*VFFPDR
Trigger: TCTATCAGGGAAAAATACCAATAGCAGGAACGGTGG...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp CAGAATGAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTTGGAAGTCCTGGTTGTaGTTACAATGGACCACAATT +
Preference number: 5 (lower is better)
Translates to: QNEGKKPIMQWEKAVNSAWKSWL*LQWTTI
Trigger: AATTGTGGTCCATTGTAACAACAACCAGGACTTCCA...AGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGATCCTGGAAGTCCTGGTaGTTGTTACAATGGACCACA +
Preference number: 5 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGSWKSW*LLQWTT
Trigger: TGTGGTCCATTGTAACAACAACCAGGACTTCCAGGA...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAATGATGGTCTGGCCGTaGCTTCTGGTTTCTTCAATG +
Preference number: 5 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGMMVWP*LLVSSM
Trigger: CATTGAAGAAACCAGAAGCAACGGCCAGACCATCAT...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAATACACTCATCTGTTaGCTTCAAAAGCCTCCGCAC +
Preference number: 5 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKNTLIC*LQKPPH
Trigger: GTGCGGAGGCTTTTGAAGCAAACAGATGAGTGTATT...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCCTGATGGATTTGGTGTaGGTGTGGGTGACCAGAGCT +
Preference number: 5 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGLMDLV*VWVTRA
Trigger: AGCTCTGGTCACCCACACCAACACCAAATCCATCAG...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAACTAGAGGGGCCCTTTaGTTCTGGATGTACAAGTTG +
Preference number: 5 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGTRGAL*FWMYKL
Trigger: CAACTTGTACATCCAGAACAAAAGGGCCCCTCTAGT...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAATTCTGATCAGCCCTTaGGCCTCAATTTCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGILISP*ASISSD
Trigger: GTCACTGGAAATTGAGGCCAAAGGGCTGATCAGAAT...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGTGTAGCTATGGGACCTaGAGACTCTCAGTACCAAAA +
Preference number: 5 (lower is better)
Translates to: SWTRSIFLQILLRVPPKECSYGT*RLSVPK
Trigger: TTTTGGTACTGAGAGTCTCAAGGTCCCATAGCTACA...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGCCTTTCAGGAAGTCATaGATGTTGTTGATGCAGTCA +
Preference number: 5 (lower is better)
Translates to: KKPIMQWEKAVNSATKREPFRKS*MLLMQS
Trigger: TGACTGCATCAACAACATCAATGACTTCCTGAAAGG...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS-3UTR CAA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCTCTTCTGTTGCTTTGTaGACAGCTAAAAGAGTACTC +
Preference number: 5 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLSSVAL*TAKRVL
Trigger: GAGTACTCTTTTAGCTGTCAACAAAGCAACAGAAGA...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GGCGCTGAATTTGGATGTGTGCTGTTCTGTGACTGTCTTCTAAACCTGGTTTCTTCTTCTGTTGCTTTGTaGACAGCTAAAAGAGTACTC +
Preference number: 5 (lower is better)
Translates to: GAEFGCVLFCDCLLNLVSSSVAL*TAKRVL
Trigger: GAGTACTCTTTTAGCTGTCAACAAAGCAACAGAAGA...AGAAACCAGGTTTAGAAGACAGTCACAGAACAGCACACATCCAAATTCAGCGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAACATTCTTCCAAGGCTaGGCAGAGTGTCTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGTFFQG*AECLLK
Trigger: TTTCAACAGACACTCTGCCAAGCCTTGGAAGAATGT...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AAACTGAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTGAAGGCACACTCGGTTTTCTGGAAACTTaGAACATTCTTCCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: KLSQIIQRDISRCPEGTLGFLET*NILPRL
Trigger: AAGCCTTGGAAGAATGTTCAAAGTTTCCAGAAAACC...GAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGGATGACGATGAGGTTTaGGATAATGAACTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEDDDEV*DNELQE
Trigger: CTCTTGCAGTTCATTATCCAAAACCTCATCGTCATC...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAGATCACTTTAAGGATTaGAGCATCCTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGDHFKD*SILFQS
Trigger: GCTCTGGAAGAGGATGCTCAAATCCTTAAAGTGATC...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCGGCCTTGTTGAAAATTaGCGCTGGTGCAGTAGGCTT +
Preference number: 5 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGGLVEN*RWCSRL
Trigger: AAGCCTACTGCACCAGCGCAAATTTTCAACAAGGCC...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGATGGTTATGGAAGAATaGAGGTCTTGCTACTGGACT +
Preference number: 5 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEMVMEE*RSCYWT
Trigger: AGTCCAGTAGCAAGACCTCAATTCTTCCATAACCAT...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAATGGTTATGGAAGAATaGAGGTCTTGCTACTGGACT +
Preference number: 5 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKMVMEE*RSCYWT
Trigger: AGTCCAGTAGCAAGACCTCAATTCTTCCATAACCAT...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGATTGGGCAGATGTGTTaGTCTTTCATCCTACTCAAG +
Preference number: 5 (lower is better)
Translates to: KKPIMQWEKAVNSATKREIGQMC*SFILLK
Trigger: CTTGAGTAGGATGAAAGACAAACACATCTGCCCAAT...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AGTTGGACCAGAAGCATATTTCTGCAAATACTGCTTAGAGTCCCACCCAAAGAGATTTATTGCAAGCCATaGACTAACCACAGAATGGGC +
Preference number: 5 (lower is better)
Translates to: SWTRSIFLQILLRVPPKEIYCKP*TNHRMG
Trigger: GCCCATTCTGTGGTTAGTCAATGGCTTGCAATAAAT...CTCTTTGGGTGGGACTCTAAGCAGTATTTGCAGAAATATGCTTCTGGTCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS TCA 90 bp TCTGGAAACTTTGAACATTCTTCCAAGGCTTGGCAGAGTGTCTGTTaGAATGTGCATACTTCCTCGAAGTTTCCCAGTAAAGATGTAACC +
Preference number: 5 (lower is better)
Translates to: SGNFEHSSKAWQSVC*NVHTSSKFPSKDVT
Trigger: GGTTACATCTTTACTGGGAAACTTCGAGGAAGTATGCACATTTCAACAGACACTCTGCCAAGCCTTGGAAGAATGTTCAAAGTTTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp AAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAAAGGGAGAAGTCATTGATGTTGTaGATGCAGTCAGCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: KKPIMQWEKAVNSATKREKSLML*MQSASV
Trigger: AACTGAAGCTGACTGCATCAACAACATCAATGACTT...CTCCCTTTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS-3UTR CAA 90 bp GAGGGAAAGAAACCTATCATGCAATGGGAAAAGGCGGTCAACTCTGCTACTAAATCTTCTGTTGCTTTGTaGACAGCTAAAAGAGTACTC +
Preference number: 5 (lower is better)
Translates to: EGKKPIMQWEKAVNSATKSSVAL*TAKRVL
Trigger: GAGTACTCTTTTAGCTGTCAACAAAGCAACAGAAGA...TTTAGTAGCAGAGTTGACCGCCTTTTCCCATTGCATGATAGGTTTCTTTCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCTCCACAGTACTCAGATaGTTATTGGACTGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGSTVLR*LLDCRG
Trigger: ACCCCTGCAGTCCAATAACAATCTGAGTACTGTGGA...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCATGATGGTCTGGCCGTaGCTTCTGGTTTCTTCAATG +
Preference number: 5 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGMMVWP*LLVSSM
Trigger: CATTGAAGAAACCAGAAGCAACGGCCAGACCATCAT...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAATTGGGCAGATGTGTTaGTCTTTCATCCTACTCAAG +
Preference number: 5 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGIGQMC*SFILLK
Trigger: CTTGAGTAGGATGAAAGACAAACACATCTGCCCAAT...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCAATTTGCTGATGGATTaGGTGTTGGTGTGGGTGACC +
Preference number: 5 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGNLLMD*VLVWVT
Trigger: GGTCACCCACACCAACACCAAATCCATCAGCAAATT...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTTTCTGGATGTACAAGTaGGACCAGAAGCATATTTCT +
Preference number: 5 (lower is better)
Translates to: LASISSDLPHLAKFLLSFFWMYK*DQKHIS
Trigger: AGAAATATGCTTCTGGTCCAACTTGTACATCCAGAA...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS TCA 90 bp GGATCAAATATCAAAATCCTCTTTGGTCTTCCTACTAGTTCCAACTaGGCAGCTAAATATGCAAAGCTTTGCCTAGCGGAAACTGATGGA +
Preference number: 5 (lower is better)
Translates to: GSNIKILFGLPTSSN*AAKYAKLCLAETDG
Trigger: TCCATCAGTTTCCGCTAGGCAAAGCTTTGCATATTTAGCTGCTCAGTTGGAACTAGTAGGAAGACCAAAGAGGATTTTGATATTTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370622.5
CDS-3UTR CAA 90 bp TCTGGAAGATTTGCCTTCGGTAAATTAAGTACTAAGAGGCTTGCAGGTACAGGAATCAAATATTTCCACTaGGAGGGTTGCACATCCTTT +
Preference number: 5 (lower is better)
Translates to: SGRFAFGKLSTKRLAGTGIKYFH*EGCTSF
Trigger: AAAGGATGTGCAACCCTCCAAGTGGAAATATTTGAT...TCCTGTACCTGCAAGCCTCTTAGTACTTAATTTACCGAAGGCAAATCTTCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS-3UTR CAA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCCACTCATCCGAGGACTaGCAGATAACATTATCAGGA +
Preference number: 5 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGHSSED*QITLSG
Trigger: TCCTGATAATGTTATCTGCAAGTCCTCGGATGAGTG...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTGGCCTCAATTTCCAGTGACCTTCCCCATCTGGCCAAATTTCTCTTGTCTTTTATATCAAAATCCTCTTaGGTCTTCCTACTAGTTCCA +
Preference number: 5 (lower is better)
Translates to: LASISSDLPHLAKFLLSFISKSS*VFLLVP
Trigger: TGGAACTAGTAGGAAGACCAAAGAGGATTTTGATAT...AAAAGACAAGAGAAATTTGGCCAGATGGGGAAGGTCACTGGAAATTGAGGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370622.5
CDS TCA 90 bp TCCTTCTTCAACTCGTGTGACGTAAATGATGTCCCCCTTACAAACTaGCAGTTCATCCTCATTAGTCTGCTTAAAGTTGAATCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: SFFNSCDVNDVPLTN*QFILISLLKVESCF
Trigger: AAAGCAAGATTCAACTTTAAGCAGACTAATGAGGATGAACTGTCAGTTTGTAAGGGGGACATCATTTACGTCACACGAGTTGAAGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS TCA 90 bp GAATTGTTCCAACTCATCACTGTGCTGAGTGAGCACATTTACAGCTaGAGGATGGTTTGCACAGTAAGCCAGATACATAGATTTAAAATG +
Preference number: 5 (lower is better)
Translates to: ELFQLITVLSEHIYS*RMVCTVSQIHRFKM
Trigger: CATTTTAAATCTATGTATCTGGCTTACTGTGCAAACCATCCTTCAGCTGTAAATGTGCTCACTCAGCACAGTGATGAGTTGGAACAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCAGGAAGTCATTGATGTaGTTGATGCAGTCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGRKSLM*LMQSAS
Trigger: TGAAGCTGACTGCATCAACAACATCAATGACTTCCT...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS-3UTR CAA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCATGGTTATGGAAGAATaGAGGTCTTGCTACTGGACT +
Preference number: 5 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGMVMEE*RSCYWT
Trigger: AGTCCAGTAGCAAGACCTCAATTCTTCCATAACCAT...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS-3UTR CAA 90 bp TTACAGGGCAACAGGAACCCATTTATAGAGTATTGTAAACAACACAACTATGGCATTTATTGCAAGCCATaGACTAACCACAGAATGGGC +
Preference number: 5 (lower is better)
Translates to: LQGNRNPFIEYCKQHNYGIYCKP*TNHRMG
Trigger: GCCCATTCTGTGGTTAGTCAATGGCTTGCAATAAAT...GCCATAGTTGTGTTGTTTACAATACTCTATAAATGGGTTCCTGTTGCCCTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CCA 72 bp GCCAAGGCTGCGGGAACAGATCAACCCAGCCGGAGCTaGGACCCTGCCCTGAGCGCGGCCGCCACCAGGGCG +
Preference number: 6 (lower is better)
Translates to: AKAAGTDQPSRS*DPALSAAATRA
Trigger: CGCCCTGGTGGCGGCCGCGCTCAGGGCAGGGTCCCAGCTCCGGCTGGGTTGATCTGTTCCCGCAGCCTTGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370620.5
CDS TCA 72 bp GAGTCAAATCATTCAGCGGGACATTTCAAGATGCCCTaGAGGCACACTCCACCCAGTGGCACAGTGATGGTT +
Preference number: 6 (lower is better)
Translates to: ESNHSAGHFKMP*RHTPPSGTVMV
Trigger: AACCATCACTGTGCCACTGGGTGGAGTGTGCCTTCAGGGCATCTTGAAATGTCCCGCTGAATGATTTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS TCA 72 bp AAGCCATGTCACGATTTGTTCTTCTGGATTCATTACTaGGGACGGTACACTCCAAACAGCACTCTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: KPCHDLFFWIHY*GRYTPNSTLGQ
Trigger: CTGCCCCAGAGTGCTGTTTGGAGTGTACCGTCCTCAGTAATGAATCCAGAAGAACAAATCGTGACATGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS CCA 72 bp ACATTTCAAGATGCCCTGAAGGCACACTCCACCCAGTaGCACAGTGATGGTTATGGAAGAATTGAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: TFQDALKAHSTQ*HSDGYGRIEVL
Trigger: CAAGACCTCAATTCTTCCATAACCATCACTGTGCCACTGGGTGGAGTGTGCCTTCAGGGCATCTTGAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CAA 90 bp CTGATCAGTCTGTTCAGCTGCTCCAACCATTCCTGGAAGTCCTGGTaGTTGTTACAATGGACCACAATTCTCTCCACTGTGTTACCAGTG +
Preference number: 6 (lower is better)
Translates to: LISLFSCSNHSWKSW*LLQWTTILSTVLPV
Trigger: CACTGGTAACACAGTGGAGAGAATTGTGGTCCATTGTAACAACAACCAGGACTTCCAGGAATGGTTGGAGCAGCTGAACAGACTGATCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CAA 90 bp CACTCCACCCAGTGGCACAGTGATGGTTATGGAAGAATTGAGGTCTaGCTACTGGACTCGCCTCGAATACACTCATCTGTTTGCTTCAAA +
Preference number: 6 (lower is better)
Translates to: HSTQWHSDGYGRIEV*LLDSPRIHSSVCFK
Trigger: TTTGAAGCAAACAGATGAGTGTATTCGAGGCGAGTCCAGTAGCAAGACCTCAATTCTTCCATAACCATCACTGTGCCACTGGGTGGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CCA 72 bp CCTCTGATCAGTCTGTTCAGCTGCTCCAACCATTCCTaGAAGTCCTGGTTGTTGTTACAATGGACCACAATT +
Preference number: 6 (lower is better)
Translates to: PLISLFSCSNHS*KSWLLLQWTTI
Trigger: AATTGTGGTCCATTGTAACAACAACCAGGACTTCCAGGAATGGTTGGAGCAGCTGAACAGACTGATCAGAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CAA 72 bp CAGTGGCACAGTGATGGTTATGGAAGAATTGAGGTCTaGCTACTGGACTCGCCTCGAATACACTCATCTGTT +
Preference number: 6 (lower is better)
Translates to: QWHSDGYGRIEV*LLDSPRIHSSV
Trigger: AACAGATGAGTGTATTCGAGGCGAGTCCAGTAGCAAGACCTCAATTCTTCCATAACCATCACTGTGCCACTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CAA 90 bp ATCAGTCTGTTCAGCTGCTCCAACCATTCCTGGAAGTCCTGGTTGTaGTTACAATGGACCACAATTCTCTCCACTGTGTTACCAGTGATT +
Preference number: 6 (lower is better)
Translates to: ISLFSCSNHSWKSWL*LQWTTILSTVLPVI
Trigger: AATCACTGGTAACACAGTGGAGAGAATTGTGGTCCATTGTAACAACAACCAGGACTTCCAGGAATGGTTGGAGCAGCTGAACAGACTGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS TCA 72 bp GAAACTGTGCTAGAAACTGCTCCCTGTGGGTTTGTCTaGGAAGTATTAGCAGCACTAAGAGAAGAGGAACGT +
Preference number: 6 (lower is better)
Translates to: ETVLETAPCGFV*EVLAALREEER
Trigger: ACGTTCCTCTTCTCTTAGTGCTGCTAATACTTCTCAGACAAACCCACAGGGAGCAGTTTCTAGCACAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS GCA 72 bp AGTGGCACAGTGATGGTTATGGAAGAATTGAGGTCTTaGTACTGGACTCGCCTCGAATACACTCATCTGTTT +
Preference number: 6 (lower is better)
Translates to: SGTVMVMEELRS*YWTRLEYTHLF
Trigger: AAACAGATGAGTGTATTCGAGGCGAGTCCAGTAGCAAGACCTCAATTCTTCCATAACCATCACTGTGCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CCA 72 bp AAGTCATTGATGTTGTTGATGCAGTCAGCTTCAGTTTaGGGATCCAGACAAAACTTTTCCACAGAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: KSLMLLMQSASV*GSRQNFSTEPG
Trigger: GCCTGGCTCTGTGGAAAAGTTTTGTCTGGATCCCCAAACTGAAGCTGACTGCATCAACAACATCAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS CCA 72 bp GGTAAGTGGAGCAGTTTCAAATCCTTTGACGGCTTTTaGGGAGAGAGGTCTCTCACTGGATTTAATTTCACG +
Preference number: 6 (lower is better)
Translates to: GKWSSFKSFDGF*GERSLTGFNFT
Trigger: CGTGAAATTAAATCCAGTGAGAGACCTCTCTCCCCAAAAGCCGTCAAAGGATTTGAAACTGCTCCACTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CAA 72 bp AGGGTTGCACATCCTTTCAGGAAGTCATTGATGTTGTaGATGCAGTCAGCTTCAGTTTGGGGATCCAGACAA +
Preference number: 6 (lower is better)
Translates to: RVAHPFRKSLML*MQSASVWGSRQ
Trigger: TTGTCTGGATCCCCAAACTGAAGCTGACTGCATCAACAACATCAATGACTTCCTGAAAGGATGTGCAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS CAA 72 bp GATACCTGGGCTCGATGCACCTTGATTTTCCATGAATaGTTCCAACTCATCACTGTGCTGAGTGAGCACATT +
Preference number: 6 (lower is better)
Translates to: DTWARCTLIFHE*FQLITVLSEHI
Trigger: AATGTGCTCACTCAGCACAGTGATGAGTTGGAACAATTCATGGAAAATCAAGGTGCATCGAGCCCAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CCA 72 bp TCCAACCATTCCTGGAAGTCCTGGTTGTTGTTACAATaGACCACAATTCTCTCCACTGTGTTACCAGTGATT +
Preference number: 6 (lower is better)
Translates to: SNHSWKSWLLLQ*TTILSTVLPVI
Trigger: AATCACTGGTAACACAGTGGAGAGAATTGTGGTCCATTGTAACAACAACCAGGACTTCCAGGAATGGTTGGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CCA 72 bp ACAGTGATGGTTATGGAAGAATTGAGGTCTTGCTACTaGACTCGCCTCGAATACACTCATCTGTTTGCTTCA +
Preference number: 6 (lower is better)
Translates to: TVMVMEELRSCY*TRLEYTHLFAS
Trigger: TGAAGCAAACAGATGAGTGTATTCGAGGCGAGTCCAGTAGCAAGACCTCAATTCTTCCATAACCATCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS CAA 90 bp TCAAATATTTCCACTTGGAGGGTTGCACATCCTTTCAGGAAGTCATaGATGTTGTTGATGCAGTCAGCTTCAGTTTGGGGATCCAGACAA +
Preference number: 6 (lower is better)
Translates to: SNISTWRVAHPFRKS*MLLMQSASVWGSRQ
Trigger: TTGTCTGGATCCCCAAACTGAAGCTGACTGCATCAACAACATCAATGACTTCCTGAAAGGATGTGCAACCCTCCAAGTGGAAATATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250617.7
CDS TCA 72 bp GTTGTTAAAATGAGGATACCTGGGCTCGATGCACCTTaGTTTTCCATGAATTGTTCCAACTCATCACTGTGC +
Preference number: 6 (lower is better)
Translates to: VVKMRIPGLDAP*FSMNCSNSSLC
Trigger: GCACAGTGATGAGTTGGAACAATTCATGGAAAATCAAGGTGCATCGAGCCCAGGTATCCTCATTTTAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS TCA 72 bp TTTGAACATTCTTCCAAGGCTTGGCAGAGTGTCTGTTaGAATGTGCATACTTCCTCGAAGTTTCCCAGTAAA +
Preference number: 6 (lower is better)
Translates to: FEHSSKAWQSVC*NVHTSSKFPSK
Trigger: TTTACTGGGAAACTTCGAGGAAGTATGCACATTTCAACAGACACTCTGCCAAGCCTTGGAAGAATGTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS TCA 72 bp ATCAAAATCCTCTTTGGTCTTCCTACTAGTTCCAACTaGGCAGCTAAATATGCAAAGCTTTGCCTAGCGGAA +
Preference number: 6 (lower is better)
Translates to: IKILFGLPTSSN*AAKYAKLCLAE
Trigger: TTCCGCTAGGCAAAGCTTTGCATATTTAGCTGCTCAGTTGGAACTAGTAGGAAGACCAAAGAGGATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370622.5
CDS TCA 72 bp AACTCGTGTGACGTAAATGATGTCCCCCTTACAAACTaGCAGTTCATCCTCATTAGTCTGCTTAAAGTTGAA +
Preference number: 6 (lower is better)
Translates to: NSCDVNDVPLTN*QFILISLLKVE
Trigger: TTCAACTTTAAGCAGACTAATGAGGATGAACTGTCAGTTTGTAAGGGGGACATCATTTACGTCACACGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250617.7
ENST00000370620.5
ENST00000370622.5
CDS GCA 72 bp AAGGTCATCAGGATCAAATATTTCCACTTGGAGGGTTaGACATCCTTTCAGGAAGTCATTGATGTTGTTGAT +
Preference number: 6 (lower is better)
Translates to: KVIRIKYFHLEG*TSFQEVIDVVD
Trigger: ATCAACAACATCAATGACTTCCTGAAAGGATGTGCAACCCTCCAAGTGGAAATATTTGATCCTGATGACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250617.7