RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF40 (Homo sapiens)

Ensembl gene IDs: ENSG00000165801

Ensembl transcript IDs: ENST00000298694.9, ENST00000553709.5, ENST00000554514.1, ENST00000555038.5, ENST00000555052.1, ENST00000555232.5, ENST00000556399.5

Found 1147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGAGCAGGCTCCCGGCGAAAGGCCGGGAAGGGAGGGGCCGGCATaGTCAAAGGATGACACGGCCACGGAGGCCCGGGTGCGGGCGGCT +
Preference number: 1 (lower is better)
Translates to: REQAPGERPGREGPA*SKDDTATEARVRAA
Trigger: AGCCGCCCGCACCCGGGCCTCCGTGGCCGTGTCATCCTTTGAGCATGCCGGCCCCTCCCTTCCCGGCCTTTCGCCGGGAGCCTGCTCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
3UTR TCA 90 bp TCCCGGCGAAAGGCCGGGAAGGGAGGGGCCGGCATGCTCAAAGGATaGCACGGCCACGGAGGCCCGGGTGCGGGCGGCTCTTCCAGTGAG +
Preference number: 1 (lower is better)
Translates to: SRRKAGKGGAGMLKG*HGHGGPGAGGSSSE
Trigger: CTCACTGGAAGAGCCGCCCGCACCCGGGCCTCCGTGGCCGTGTCATCCTTTGAGCATGCCGGCCCCTCCCTTCCCGGCCTTTCGCCGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
3UTR CCA 90 bp CCCACGTGTTGCTGGATCCTCCTCTCTAGCTCTTGGCAGCGGGCCTaGCAGCGGCCCCATTCTCGCAGGGCTGCTGGGCTGCCCAGGTCC +
Preference number: 1 (lower is better)
Translates to: PTCCWILLSSSWQRA*QRPHSRRAAGLPRS
Trigger: GGACCTGGGCAGCCCAGCAGCCCTGCGAGAATGGGGCCGCTGCCAGGCCCGCTGCCAAGAGCTAGAGAGGAGGATCCAGCAACACGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 90 bp TCCGTCTGGCCCCCTAGCCCGGCCCAGCAGCACGTGTTCCCGTGGTaGGCACGTCCTGTCTACCACCTCAGTGCTGGTGACCTCCAGGCC +
Preference number: 1 (lower is better)
Translates to: SVWPPSPAQQHVFPW*ARPVYHLSAGDLQA
Trigger: GGCCTGGAGGTCACCAGCACTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGGCTAGGGGGCCAGACGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp TGGCGCAGCCCTGAAGCTCCCGCAGAAAGTGTGTCCGGTGGAAGCTaGGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGTGCCCC +
Preference number: 1 (lower is better)
Translates to: WRSPEAPAESVSGGS*EAFPGHSGQQPRCP
Trigger: GGGGCACCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACACACTTTCTGCGGGAGCTTCAGGGCTGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp GAGAGCCACTGCAACACCTGCTGGAGTCGCCGCAGGCACTGCCGCTaGTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGG +
Preference number: 1 (lower is better)
Translates to: ESHCNTCWSRRRHCR*SCCCTCRLERRTSW
Trigger: CCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTGTTGCAGTGGCTCTC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 90 bp CGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGCTGGTaGCCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCT +
Preference number: 1 (lower is better)
Translates to: RVPVVSTSCLPPQCW*PPGLGSAQLLGACP
Trigger: AGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCACCAGCACTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 90 bp CGAAGGAAGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTaGAGCTCCCGCAGAAAGTGTGTCCGGTGGAAGCTGCGAAGCCTT +
Preference number: 1 (lower is better)
Translates to: RRKQAPMRRGWVAQP*SSRRKCVRWKLRSL
Trigger: AAGGCTTCGCAGCTTCCACCGGACACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCTTCCTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp GATCTATCTCACAGCCACGCACCGCCTCCACGGCCAGCAGGTCTCTaGCACGGGCCTCTTGTTCCCGGAGCAGCTGTACAGCAGCCCCAA +
Preference number: 1 (lower is better)
Translates to: DLSHSHAPPPRPAGL*HGPLVPGAAVQQPQ
Trigger: TTGGGGCTGCTGTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCGTGGAGGCGGTGCGTGGCTGTGAGATAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp CCATCCCTCTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTaGAGTGGCTTGGGCATTCCCACTGCCTCCTCTTCCTCTGGCTCT +
Preference number: 1 (lower is better)
Translates to: PSLCSAVSRGSASTF*SGLGIPTASSSSGS
Trigger: AGAGCCAGAGGAAGAGGAGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAGAGGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp TGCAGGGCAGACAAGGTGTCCCCAGGCATAGCAAAGCTTGCCAGCTaGTCCTCCCCTGGGCCCGAGAGCCACTGCAACACCTGCTGGAGT +
Preference number: 1 (lower is better)
Translates to: CRADKVSPGIAKLAS*SSPGPESHCNTCWS
Trigger: ACTCCAGCAGGTGTTGCAGTGGCTCTCGGGCCCAGGGGAGGAGCAGCTGGCAAGCTTTGCTATGCCTGGGGACACCTTGTCTGCCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp TGTCTCCTGCAGGGCAGACAAGGTGTCCCCAGGCATAGCAAAGCTTaGCAGCTGCTCCTCCCCTGGGCCCGAGAGCCACTGCAACACCTG +
Preference number: 1 (lower is better)
Translates to: CLLQGRQGVPRHSKA*QLLLPWAREPLQHL
Trigger: CAGGTGTTGCAGTGGCTCTCGGGCCCAGGGGAGGAGCAGCTGGCAAGCTTTGCTATGCCTGGGGACACCTTGTCTGCCCTGCAGGAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 90 bp GTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTaGAGAGGCGCACAAGCTGGTGAATGGCCTCGTCCACTTCCTGAT +
Preference number: 1 (lower is better)
Translates to: VAAGTAAALAAARAG*RGAQAGEWPRPLPD
Trigger: ATCAGGAAGTGGACGAGGCCATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 90 bp AGCCCAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTaGCACTGGCTCACTCAAGGTGGCCACGTAATCTTGTTCACAGGC +
Preference number: 1 (lower is better)
Translates to: SPGAPKFRRQLRPRG*HWLTQGGHVILFTG
Trigger: GCCTGTGAACAAGATTACGTGGCCACCTTGAGTGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 90 bp GGGCTGCCAGGGAGGGCTGGCATGGGAGTGATGTCCTGGATACAGTaGCCCAGGATGGGAAAGCACCGGAAGAGGGATAACTTCCCCACC +
Preference number: 1 (lower is better)
Translates to: GLPGRAGMGVMSWIQ*PRMGKHRKRDNFPT
Trigger: GGTGGGGAAGTTATCCCTCTTCCGGTGCTTTCCCATCCTGGGCCACTGTATCCAGGACATCACTCCCATGCCAGCCCTCCCTGGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR CCA 90 bp CAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCTCACTCAAGGTaGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCC +
Preference number: 1 (lower is better)
Translates to: QASAQAQGVALAHSR*PRNLVHRQSAQTPA
Trigger: GGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGTGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 90 bp GGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTaGCTCACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAG +
Preference number: 1 (lower is better)
Translates to: GAPKFRRQLRPRGWH*LTQGGHVILFTGNQ
Trigger: CTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGTGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp AAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCCACTCTCAACCTaGTCCAGCCGCTGTTCAAAGATATCCAGCACCTTCTGGGAGGTG +
Preference number: 1 (lower is better)
Translates to: KKRCSRRARWRPLST*SSRCSKISSTFWEV
Trigger: CACCTCCCAGAAGGTGCTGGATATCTTTGAACAGCGGCTGGAGCAGGTTGAGAGTGGCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 90 bp GGAGAACATGGGCTGCCAGGGAGGGCTGGCATGGGAGTGATGTCCTaGATACAGTGGCCCAGGATGGGAAAGCACCGGAAGAGGGATAAC +
Preference number: 1 (lower is better)
Translates to: GEHGLPGRAGMGVMS*IQWPRMGKHRKRDN
Trigger: GTTATCCCTCTTCCGGTGCTTTCCCATCCTGGGCCACTGTATCCAGGACATCACTCCCATGCCAGCCCTCCCTGGCAGCCCATGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR CCA 90 bp CCCTCCAGCTCCTCAATGGCCTGCCGTACCGAGCCCAGCACACCTTaGCACAGGCGACATAGCCTTACCACTTCCTGGTGTATCTCTACC +
Preference number: 1 (lower is better)
Translates to: PSSSSMACRTEPSTP*HRRHSLTTSWCIST
Trigger: GGTAGAGATACACCAGGAAGTGGTAAGGCTATGTCGCCTGTGCCAAGGTGTGCTGGGCTCGGTACGGCAGGCCATTGAGGAGCTGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 90 bp CAAGGGGAGGATCTCCTGAGTCCTGAAGTTGGCTCAAGGCAGGAATaGGTGCTGGAGGCAGTGGAGGTGCCTGACGAAGGTCCAGCAGGA +
Preference number: 1 (lower is better)
Translates to: QGEDLLSPEVGSRQE*VLEAVEVPDEGPAG
Trigger: TCCTGCTGGACCTTCGTCAGGCACCTCCACTGCCTCCAGCACTCATTCCTGCCTTGAGCCAACTTCAGGACTCAGGAGATCCTCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR GCA 90 bp CGCAGCCAGACCATTCTCCAGTTTGTGTCGGTGCTTCACGTACTGTaGATAAAGGCTGAACTGGTCCCCGTGGCGAAGGAAGCAGGCCCC +
Preference number: 1 (lower is better)
Translates to: RSQTILQFVSVLHVL*IKAELVPVAKEAGP
Trigger: GGGGCCTGCTTCCTTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGTACGTGAAGCACCGACACAAACTGGAGAATGGTCTGGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp ATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGAGAAGCTaGACGCAAGTTCTGGATCTTCTCCAGGTCACAGAGGCGTGGTGG +
Preference number: 1 (lower is better)
Translates to: MPHCHPSPKCAERRS*TQVLDLLQVTEAWW
Trigger: CCACCACGCCTCTGTGACCTGGAGAAGATCCAGAACTTGCGTGCAGCTTCTCCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 90 bp CATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATaGAGGCCACTCTCAACCTGCTCCAGCCGCTGTTCAAAGATATCC +
Preference number: 1 (lower is better)
Translates to: HSCACWKKRCSRRAR*RPLSTCSSRCSKIS
Trigger: GGATATCTTTGAACAGCGGCTGGAGCAGGTTGAGAGTGGCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 90 bp CAGCAGCTGGGCAATAGAACTTGTCCACTTGAGTTTGATCTCTGGTaGGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCG +
Preference number: 1 (lower is better)
Translates to: QQLGNRTCPLEFDLW*GCLQSVCLSCTPPP
Trigger: CGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 90 bp CCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTaGGAGGAGAAGCTGCACGCAAGTTCTGGATCTTCTCCAGGTCAC +
Preference number: 1 (lower is better)
Translates to: PGLHYAPLPSQPKVC*EEKLHASSGSSPGH
Trigger: GTGACCTGGAGAAGATCCAGAACTTGCGTGCAGCTTCTCCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp GAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTaGCATCCCAGCCCAAAGTGTGCTGAGAGGAGAAGCTGCACGCAA +
Preference number: 1 (lower is better)
Translates to: EGRNSAIAQGSIMPH*HPSPKCAERRSCTQ
Trigger: TTGCGTGCAGCTTCTCCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp AGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATaGCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGAGAAGCT +
Preference number: 1 (lower is better)
Translates to: RKQREEIQRSPRAPL*PTAIPAQSVLRGEA
Trigger: AGCTTCTCCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp CCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTGACTCCTaGAGGAGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGC +
Preference number: 1 (lower is better)
Translates to: PPPGYEGKQCGCSDS*RRRHQARETRDSGG
Trigger: GCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCTCCTGCAGGAGTCAGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR CCA 90 bp AGGGGTCCCTGTGACCTCCTAACTCCCACTGCAGCTCCTCTGGCTTaGCCACTCTTTTCAGATCATTCTCTGACAGCACCTCAGCACCCT +
Preference number: 1 (lower is better)
Translates to: RGPCDLLTPTAAPLA*PLFSDHSLTAPQHP
Trigger: AGGGTGCTGAGGTGCTGTCAGAGAATGATCTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCAGTGGGAGTTAGGAGGTCACAGGGACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp CGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCTCGATaGAAGAGCTGTCCCTGCTCCTTCAGATCTATCTCACAGCCACGC +
Preference number: 1 (lower is better)
Translates to: RRHFFRPQMTVKGSR*KSCPCSFRSISQPR
Trigger: GCGTGGCTGTGAGATAGATCTGAAGGAGCAGGGACAGCTCTTGCATCGAGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp TCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTaGCTACCTATGTCCTGCTTCCCTCTTTGGGTCCTTCTGTCAGGA +
Preference number: 1 (lower is better)
Translates to: SPINRCLEAQGPVSV*LPMSCFPLWVLLSG
Trigger: TCCTGACAGAAGGACCCAAAGAGGGAAGCAGGACATAGGTAGGCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR GCA 90 bp GCAATAGAACTTGTCCACTTGAGTTTGATCTCTGGTGAGGTTGCCTaGAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAAC +
Preference number: 1 (lower is better)
Translates to: AIELVHLSLISGEVA*RVYASRARRRRNHN
Trigger: GTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp TGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCCTACCTATGTCCTaGTTCCCTCTTTGGGTCCTTCTGTCAGGAAATAGTCACCTCTTC +
Preference number: 1 (lower is better)
Translates to: CLEAQGPVSVCLPMS*FPLWVLLSGNSHLF
Trigger: GAAGAGGTGACTATTTCCTGACAGAAGGACCCAAAGAGGGAAGCAGGACATAGGTAGGCAGACAGACACAGGGCCCTGTGCCTCAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR CCA 90 bp CCCTTGAGCTTGCTGAACAGGAGGAGATGCTCGAAGAGAAAGACATaGCGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCT +
Preference number: 1 (lower is better)
Translates to: PLSLLNRRRCSKRKT*RRHFFRPQMTVKGS
Trigger: AGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTTCAGCAAGCTCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 90 bp CTCATTTTGAGAACTGCTGGACTGTGCTGGATCCCAGTTTGTCTGTaGCCAGTTCAGCCTCAAGGAGTAGGTGCAGTGTGGGAGAAGGAG +
Preference number: 1 (lower is better)
Translates to: LILRTAGLCWIPVCL*PVQPQGVGAVWEKE
Trigger: CTCCTTCTCCCACACTGCACCTACTCCTTGAGGCTGAACTGGTCACAGACAAACTGGGATCCAGCACAGTCCAGCAGTTCTCAAAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR CCA 90 bp CACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTaGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAAAT +
Preference number: 1 (lower is better)
Translates to: HQARETRDSGGRAIL*SLDLLCVQEAEGRN
Trigger: ATTTCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR GCA 90 bp CCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTaGAGAGTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGC +
Preference number: 1 (lower is better)
Translates to: PCRRRYFWYDSCHPY*RVVSPINRCLEAQG
Trigger: GCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR GCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTaGATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGG +
Preference number: 1 (lower is better)
Translates to: TYIKSTVPLSHPPIV*IASLLVTPQNGVTR
Trigger: CCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR CCA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTaGTTGAGGGAAAGTGCTCAAGTTATTTATCACCTTAATCCAGAG +
Preference number: 1 (lower is better)
Translates to: GPSSLGFIFCVLVKG*LRESAQVIYHLNPE
Trigger: CTCTGGATTAAGGTGATAAATAACTTGAGCACTTTCCCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR CCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTGGGCCCCTCCACTGCTaGCACCGTCTGCCCGCCGTC +
Preference number: 2 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVGPLHC*HRLPAV
Trigger: GACGGCGGGCAGACGGTGCCAGCAGTGGAGGGGCCC...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GTGCGGGCGGCTCTTCCAGTGAGCAGGGCACTCAGCGTCCGCTCCCCAAGGGCTACTGGGCCCCTCCACTaGTGGCACCGTCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: VRAALPVSRALSVRSPRATGPLH*WHRLPA
Trigger: GGCGGGCAGACGGTGCCAGCAGTGGAGGGGCCCAGT...AGCCCTTGGGGAGCGGACGCTGAGTGCCCTGCTCACTGGAAGAGCCGCCCGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553709.5
3UTR-3UTR CCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTTCTTGGCAGCGGGCCTaGCAGCGGCCCCATTCTCGC +
Preference number: 2 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVSWQRA*QRPHSR
Trigger: GCGAGAATGGGGCCGCTGCCAGGCCCGCTGCCAAGA...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTCGCAGGCACTGCCGCTaGTCTTGCTGCTGCACGTGC +
Preference number: 2 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVRRHCR*SCCCTC
Trigger: GCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCG...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CAGGCTCCCGGCGAAAGGCCGGGAAGGGAGGGGCCGGCATGCTCAAAGGATGACCAGGGAGCAATGGGATaGGGCTGGCCGTGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: QAPGERPGREGPACSKDDQGAMG*GWPWPR
Trigger: CCTGGGCCACGGCCAGCCCCATCCCATTGCTCCCTG...GTCATCCTTTGAGCATGCCGGCCCCTCCCTTCCCGGCCTTTCGCCGGGAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
3UTR-3UTR TCA 90 bp CAGGCTCCCGGCGAAAGGCCGGGAAGGGAGGGGCCGGCATGCTCAAAGGATGACCCCGGCACTCAGAACTaGGCTCAGGCCCAGCTTCCC +
Preference number: 2 (lower is better)
Translates to: QAPGERPGREGPACSKDDPGTQN*AQAQLP
Trigger: GGGAAGCTGGGCCTGAGCTCAGTTCTGAGTGCCGGG...GTCATCCTTTGAGCATGCCGGCCCCTCCCTTCCCGGCCTTTCGCCGGGAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553709.5
3UTR-3UTR TCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTGGCTCAAGGCAGGAATaGGTGCTGGAGGCAGTGGAG +
Preference number: 2 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVGSRQE*VLEAVE
Trigger: CTCCACTGCCTCCAGCACTCATTCCTGCCTTGAGCC...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR-3UTR GCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTCCTCCTAACTCCCACTaGAGCTCCTCTGGCTTGGCC +
Preference number: 2 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVPPNSH*SSSGLA
Trigger: GGCCAAGCCAGAGGAGCTGCAGTGGGAGTTAGGAGG...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCTCAAGCCGCAGGGCCCGATaGAGGCCACTCTCAACCTGC +
Preference number: 2 (lower is better)
Translates to: QVPRSSGVSSGPGGGTGSSRRAR*RPLSTC
Trigger: GCAGGTTGAGAGTGGCCTCCATCGGGCCCTGCGGCT...TGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GTGTCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGCCCAGGGGGTGGCACTaGCTCACTCAAGGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: VSGGSCEAFPGHSGQQPRPRGWH*LTQGGH
Trigger: GTGGCCACCTTGAGTGAGCCAGTGCCACCCCCTGGG...CCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGGGGGCCTGCCCTCTaGTTCTGGAGCCAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQWGPAL*FWSQLR
Trigger: CCTGAGCTGGCTCCAGAAGCAGAGGGCAGGCCCCCA...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp TCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGTGCCTGAACTGGTCCCCGTaGCGAAGGAAGCAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: SGGSCEAFPGHSGQQPRCLNWSP*RRKQAP
Trigger: TGGGGCCTGCTTCCTTCGCCACGGGGACCAGTTCAG...GCACCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTAGAATCAGCAGCCGCTaGACAAGGGGAGGATCTCCT +
Preference number: 2 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVRISSR*TRGGSP
Trigger: AGGAGATCCTCCCCTTGTTCAGCGGCTGCTGATTCT...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCGGCAGTGGAGGTGCCTaGCGAAGGTCCAGCAGGACG +
Preference number: 2 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGGSGGA*RRSSRT
Trigger: CGTCCTGCTGGACCTTCGTCAGGCACCTCCACTGCC...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR-3UTR GCA 90 bp GTGTCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGCGCTGCTCTTGCTGCTaGACGTGCAGGTTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: VSGGSCEAFPGHSGQQPRRCSCC*TCRLER
Trigger: CCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCG...CCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTTCCTCTCCCACGTGTTaGTGGATCCTCCTCTCTAGC +
Preference number: 2 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVSSPTC*WILLSS
Trigger: GCTAGAGAGGAGGATCCAGCAACACGTGGGAGAGGA...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGCAGCTCTTGGGGGCCTaGCCTCTGCTTCTGGAGCCA +
Preference number: 2 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQQLLGA*PLLLEP
Trigger: TGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTG...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GTGACCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTCTCCTCTCTAGCTCTTaGCAGCGGGCCTGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: VTSRPRISTALGGLPSASLLSSS*QRAWQR
Trigger: CCGCTGCCAGGCCCGCTGCCAAGAGCTAGAGAGGAG...AGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GTGTCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGGATCAGCACAGCTCTTaGGGGCCTGCCCTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: VSGGSCEAFPGHSGQQPRDQHSS*GPALCF
Trigger: GAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATC...CCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CAA 90 bp TGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTaGGGCATTCCCACTGCCTCCTCTTCCTCTGGCTCTGCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: CSAVSRGSASTFCSG*GIPTASSSSGSAAP
Trigger: GGGAGCAGCAGAGCCAGAGGAAGAGGAGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGGGGCTGGCATGGGAGTaGTGTCCTGGATACAGTGGC +
Preference number: 2 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQGLAWE*CPGYSG
Trigger: GCCACTGTATCCAGGACATCACTCCCATGCCAGCCC...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp CAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTGGAGCCAGAGGCGCACAAGCTGGTaGATGGCCTCGTCCACTTCC +
Preference number: 2 (lower is better)
Translates to: QASDQHSSWGPALCFWSQRRTSW*MASSTS
Trigger: GGAAGTGGACGAGGCCATTCACCAGCTTGTGCGCCT...CTGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp CTCCACGGCCAGCAGGTCTCTGCCACGGGCCTCTTGTTCCCGGAGCAGCTGTACAGGCGCACAAGCTGGTaGATGGCCTCGTCCACTTCC +
Preference number: 2 (lower is better)
Translates to: LHGQQVSATGLLFPEQLYRRTSW*MASSTS
Trigger: GGAAGTGGACGAGGCCATTCACCAGCTTGTGCGCCT...GTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CTCCACGGCCAGCAGGTCTCTGCCACGGGCCTCTTGTTCCCGGAGCAGCTGTACCGCAGCTCTGTCTCCTaGAGGGCAGACAAGGTGTCC +
Preference number: 2 (lower is better)
Translates to: LHGQQVSATGLLFPEQLYRSSVS*RADKVS
Trigger: GGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCG...GTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGCGCAGCTCTGTCTCCTaGAGGGCAGACAAGGTGTCC +
Preference number: 2 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQRSSVS*RADKVS
Trigger: GGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCG...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp AGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAATACAGTGGCCCAGGATaGGAAAGCACCGGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: SRPQCVGGGWRSPEAPAEYSGPG*ESTGRG
Trigger: CCCTCTTCCGGTGCTTTCCCATCCTGGGCCACTGTA...TTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GTGACCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTCCTCCAGCTTGCTGCTaGGAGTGGAGCGCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: VTSRPRISTALGGLPSASPPACC*EWSAAS
Trigger: TGAGGCTGCGCTCCACTCCCAGCAGCAAGCTGGAGG...AGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAGTGTGGGCAGGAATGAGTGCTaGAGGCAGTGGAGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: PQCVGGGWRSPEAPAESVGRNEC*RQWRCL
Trigger: CAGGCACCTCCACTGCCTCCAGCACTCATTCCTGCC...CACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR CAA 90 bp CCACTGCAACACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTaGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAAT +
Preference number: 2 (lower is better)
Translates to: PLQHLLESPQALPLL*LLHVQVGEAHKLVN
Trigger: ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTGTTGCAGTGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGGGCTGCTCTGACTCCTaGAGGAGAAGGCACCAAGCT +
Preference number: 2 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQGCSDS*RRRHQA
Trigger: AGCTTGGTGCCTTCTCCTGCAGGAGTCAGAGCAGCC...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CTCCACGGCCAGCAGGTCTCTGCCACGGGCCTCTTGTTCCCGGAGCAGCTGTACGGCTGCTCTGACTCCTaGAGGAGAAGGCACCAAGCT +
Preference number: 2 (lower is better)
Translates to: LHGQQVSATGLLFPEQLYGCSDS*RRRHQA
Trigger: AGCTTGGTGCCTTCTCCTGCAGGAGTCAGAGCAGCC...GTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTAGCTCCTCAATGGCCTaGCGTACCGAGCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: AVSRGSASTFCSGLGIPTSSSMA*RTEPST
Trigger: TGTGCTGGGCTCGGTACGGCAGGCCATTGAGGAGCT...AGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CCATCCCTCTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCCTTGGGCATTCCCACTaGCTCCTCTTCCTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: PSLCSAVSRGSASTFCSGLGHSH*LLFLWL
Trigger: GAGCCAGAGGAAGAGGAGGCAGTGGGAATGCCCAAG...GCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAGAGGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGGCCCTCCAGCTTGCTaGTGGGAGTGGAGCGCAGCC +
Preference number: 2 (lower is better)
Translates to: LSAESTESQLCLLQGRQGGPPAC*WEWSAA
Trigger: GGCTGCGCTCCACTCCCAGCAGCAAGCTGGAGGGCC...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGGCAAAGCTTGCCAGCTaGTCCTCCCCTGGGCCCGAG +
Preference number: 2 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEAKLAS*SSPGPE
Trigger: CTCGGGCCCAGGGGAGGAGCAGCTGGCAAGCTTTGC...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGGCATCTCCTGGAAGGTaGCGGCACTGGGCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEASPGR*RHWALG
Trigger: CCCCAGAGCCCAGTGCCGGCACCTTCCAGGAGATGC...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGTGGGGGCCTGCCCTCTaGTTCTGGAGCCAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEWGPAL*FWSQLR
Trigger: CCTGAGCTGGCTCCAGAAGCAGAGGGCAGGCCCCCA...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGCTGGAGGCAGTGGAGGTaGCTGACGAAGGTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: GPAARVPVVSTSCLPPQCWRQWR*LTKVQQ
Trigger: CTGCTGGACCTTCGTCAGGCACCTCCACTGCCTCCA...GCACTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR-3UTR GCA 90 bp CCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAGTGTGCAAGGCAGGAATGAGTaGTGGAGGCAGTGGAGGTGC +
Preference number: 2 (lower is better)
Translates to: PQCVGGGWRSPEAPAESVQGRNE*WRQWRC
Trigger: GCACCTCCACTGCCTCCAGCACTCATTCCTGCCTTG...CACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR-3UTR CCA 90 bp CCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAGTGTGCAGCACCTTCTGCAGTaGCTTGGGCATTCCCACTGC +
Preference number: 2 (lower is better)
Translates to: PQCVGGGWRSPEAPAESVQHLLQ*LGHSHC
Trigger: GCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTG...CACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GTGTCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGCATTCATGTGCCTGCTaGAAGAAGCGCTGTAGCCGC +
Preference number: 2 (lower is better)
Translates to: VSGGSCEAFPGHSGQQPRHSCAC*KKRCSR
Trigger: GCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATG...CCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp AGCCCAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGTTTCAGATCATTCTCTaGCAGCACCTCAGCACCCTG +
Preference number: 2 (lower is better)
Translates to: SPGAPKFRRQLRPRGWHWFQIIL*QHLSTL
Trigger: CAGGGTGCTGAGGTGCTGTCAGAGAATGATCTGAAA...CCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp GTGACCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTTGTATCTCTACCCAGTaGCTGGGAGAGGGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: VTSRPRISTALGGLPSASCISTQ*LGEGSL
Trigger: CAGGGACCCCTCTCCCAGTCACTGGGTAGAGATACA...AGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp GGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGCGCCTCGTCCACTTCCTaGTACAGTGTAGCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: GPAARVPVVSTSCLPPQCASSTS*YSVAGP
Trigger: AGGCCCAGCTACACTGTATCAGGAAGTGGACGAGGC...GCACTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACGTGTTCCCGTGGTaGGCACGTCCTGTCTACCAC +
Preference number: 2 (lower is better)
Translates to: SGEVACRVYASRARRRRNHVFPW*ARPVYH
Trigger: GTGGTAGACAGGACGTGCTCACCACGGGAACACGTG...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp CTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCACCCGGCACTCAGAACTaGGCTCAGGCCCAGCTTCCC +
Preference number: 2 (lower is better)
Translates to: LQSVCLSCTPPPKPQLKAPGTQN*AQAQLP
Trigger: GGGAAGCTGGGCCTGAGCTCAGTTCTGAGTGCCGGG...TGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp AGCCCAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGTCTGTAGATCAGGCCTaGGCAGTGAGTGGAGGTAAT +
Preference number: 2 (lower is better)
Translates to: SPGAPKFRRQLRPRGWHWSVDQA*AVSGGN
Trigger: ATTACCTCCACTCACTGCTCAGGCCTGATCTACAGA...CCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR-3UTR GCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTTCCTCTGGCTCTGCTaGTCCCTCCAGCTCCTCAAT +
Preference number: 2 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQFLWLC*SLQLLN
Trigger: ATTGAGGAGCTGGAGGGAGCAGCAGAGCCAGAGGAA...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCACCCATCCCTCTGCAGTaGCGTCAGCCGGGGATCTGC +
Preference number: 2 (lower is better)
Translates to: LQSVCLSCTPPPKPQLKAPIPLQ*RQPGIC
Trigger: GCAGATCCCCGGCTGACGGCACTGCAGAGGGATGGG...TGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GAGCAGGGCACTCAGCGTCCGCTCCCCAAGGGCTTTGATGTCCAGGAAGGGTTTAGCCACTGCAACACCTaGTGGAGTCGCCGCAGGCAC +
Preference number: 2 (lower is better)
Translates to: EQGTQRPLPKGFDVQEGFSHCNT*WSRRRH
Trigger: GTGCCTGCGGCGACTCCAGCAGGTGTTGCAGTGGCT...AAACCCTTCCTGGACATCAAAGCCCTTGGGGAGCGGACGCTGAGTGCCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGGGCCCGAGAGCCACTaGAACACCTGCTGGAGTCGC +
Preference number: 2 (lower is better)
Translates to: LQSVCLSCTPPPKPQLKAGPESH*NTCWSR
Trigger: GCGACTCCAGCAGGTGTTGCAGTGGCTCTCGGGCCC...TGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp TCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGTGCACCCATTCATGTGCCTaGTGGAAGAAGCGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: SGGSCEAFPGHSGQQPRCTHSCA*WKKRCS
Trigger: GCTACAGCGCTTCTTCCAGCAGGCACATGAATGGGT...GCACCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GTGTCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGATCCACCCATTCATGTaGCTGCTGGAAGAAGCGCTG +
Preference number: 2 (lower is better)
Translates to: VSGGSCEAFPGHSGQQPRIHPFM*LLEEAL
Trigger: CAGCGCTTCTTCCAGCAGGCACATGAATGGGTGGAT...CCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp TGGCGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCTCGATGCAAGGCCGTGGCCCAGGGCTaGTGGGGAGCAGCAAGGAGC +
Preference number: 2 (lower is better)
Translates to: WRRHFFRPQMTVKGSRCKAVAQG*WGAARS
Trigger: GCTCCTTGCTGCTCCCCAGCAGCCCTGGGCCACGGC...CTTGCATCGAGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTAGGGAGGGGCCGGCATaGTCAAAGGATGACACGGCC +
Preference number: 2 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCREGPA*SKDDTA
Trigger: GGCCGTGTCATCCTTTGAGCATGCCGGCCCCTCCCT...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553709.5
3UTR-3UTR CCA 90 bp TCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGTGCATGTCCTGGATACAGTaGCCCAGGATGGGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: SGGSCEAFPGHSGQQPRCMSWIQ*PRMGKH
Trigger: GTGCTTTCCCATCCTGGGCCACTGTATCCAGGACAT...GCACCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAATGCTGCCAGGGAGGGCTaGCATGGGAGTGATGTCCTG +
Preference number: 2 (lower is better)
Translates to: PLLLLLHVQVGEAHKLVNAAREG*HGSDVL
Trigger: CAGGACATCACTCCCATGCCAGCCCTCCCTGGCAGC...ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTGGAGCCAGCCACTGCAGCTCCTCTaGCTTGGCCACTCTTTTCAG +
Preference number: 2 (lower is better)
Translates to: QASDQHSSWGPALCFWSQPLQLL*LGHSFQ
Trigger: CTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCAGTGG...CTGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp TCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTGCCTGCTTGCTGCTGGGAGTaGAGCGCAGCCTCATCAGGA +
Preference number: 2 (lower is better)
Translates to: SAGDLPAPSAVAWAFPLPACCWE*SAASSG
Trigger: TCCTGATGAGGCTGCGCTCCACTCCCAGCAGCAAGC...AGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CTCCACGGCCAGCAGGTCTCTGCCACGGGCCTCTTGTTCCCGGAGCAGCTGTACCTGATACAGTGTAGCTaGGCCTTGGCCCTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: LHGQQVSATGLLFPEQLYLIQCS*ALALQL
Trigger: AAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAG...GTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CATCCACCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATTGGGCCAGGCGCTCCTaGACCTCAGCGCTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: HPPIHVPAGRSAVAAGPDWARRS*TSALKA
Trigger: TGCTTTCAGCGCTGAGGTCCAGGAGCGCCTGGCCCA...ATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGGTGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCTGCTGAGGGCCCGCATCTCCTaGAAGGTGCCGGCACTGGGC +
Preference number: 2 (lower is better)
Translates to: GGHVILFTGNQLRHQPLLRARIS*KVPALG
Trigger: GCCCAGTGCCGGCACCTTCCAGGAGATGCGGGCCCT...CAGCAGCGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCTGCTGTCTTGGCAGCGGGCCTaGCAGCGGCCCCATTCTCGC +
Preference number: 2 (lower is better)
Translates to: GGHVILFTGNQLRHQPLLSWQRA*QRPHSR
Trigger: GCGAGAATGGGGCCGCTGCCAGGCCCGCTGCCAAGA...CAGCAGCGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCGGGCCCCTCCACTGCTaGCACCGTCTGCCCGCCGTC +
Preference number: 2 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFGPLHC*HRLPAV
Trigger: GACGGCGGGCAGACGGTGCCAGCAGTGGAGGGGCCC...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGGTCACAGAGGCGTGGTaGGGTCACTCAGGGCTCGAG +
Preference number: 2 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEVTEAW*GHSGLE
Trigger: CTCGAGCCCTGAGTGACCCCACCACGCCTCTGTGAC...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTGGCAAGCAATGTGGCTaGTCTGACTCCTGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: AVSRGSASTFCSGLGIPTGKQCG*SDSCRR
Trigger: TCTCCTGCAGGAGTCAGAGCAGCCACATTGCTTGCC...AGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCTTGGCCCTCCAGCTTaGTGCTGGGAGTGGAGCGCA +
Preference number: 2 (lower is better)
Translates to: ECMPLVHAAAETTTQSRVLGPPA*CWEWSA
Trigger: TGCGCTCCACTCCCAGCAGCAAGCTGGAGGGCCAAG...GACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CCCTTGCTTAAGGGACTGAGCGCAGCCAGACCATTCTCCAGTTTGTGTCGGTGCCCATTCTCGCAGGGCTaGTGGGCTGCCCAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: PLLKGLSAARPFSSLCRCPFSQG*WAAQVQ
Trigger: CTGGACCTGGGCAGCCCAGCAGCCCTGCGAGAATGG...GCACCGACACAAACTGGAGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCACTGGGCCCCTCCACTaGTGGCACCGTCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFTGPLH*WHRLPA
Trigger: GGCGGGCAGACGGTGCCAGCAGTGGAGGGGCCCAGT...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGTGCCTGCAGAGTGTATaGCTCTCGTGCACGCCGCCG +
Preference number: 2 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQCLQSV*LSCTPP
Trigger: CGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCA...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCCCATGGACACCATCTaGTGCACTCGGAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: SGEVACRVYASRARRRRNPMDTI*CTRSSL
Trigger: CAAGGAGCTCCGAGTGCAGCAGATGGTGTCCATGGG...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGCCCACTGCAGCTCCTCTaGCTTGGCCACTCTTTTCAG +
Preference number: 2 (lower is better)
Translates to: GPAARVPVVSTSCLPPQCPLQLL*LGHSFQ
Trigger: CTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCAGTGG...GCACTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CTCCACGGCCAGCAGGTCTCTGCCACGGGCCTCTTGTTCCCGGAGCAGCTGTACATATCCAGCACCTTCTaGGAGGTGGCATTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LHGQQVSATGLLFPEQLYISSTF*EVAFSS
Trigger: GGAGGAGAATGCCACCTCCCAGAAGGTGCTGGATAT...GTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCTCAGGCCCAGGGGGTaGCACTGGCTCACTCAAGGT +
Preference number: 2 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQLRPRG*HWLTQG
Trigger: ACCTTGAGTGAGCCAGTGCCACCCCCTGGGCCTGAG...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGGCAATGTGGCTGCTCTaGCTCCTGCAGGAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEAMWLL*LLQEKA
Trigger: TGCCTTCTCCTGCAGGAGTCAGAGCAGCCACATTGC...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp GCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGTCCCCAGGCATAGCCTCGTCCACTTCCTaGTACAGTGTAGCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: ARNRSSVSCRADKVSPGIASSTS*YSVAGP
Trigger: AGGCCCAGCTACACTGTATCAGGAAGTGGACGAGGC...TATGCCTGGGGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCTGCTGCCCAGGGCTCCATTATaGCCCACTGCCATCCCAGCC +
Preference number: 2 (lower is better)
Translates to: GGHVILFTGNQLRHQPLLPRAPL*PTAIPA
Trigger: GGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGG...CAGCAGCGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CATCCACCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATTCTGCCAGCACCTTCTaGAGTGGCTTGGGCATTCCC +
Preference number: 2 (lower is better)
Translates to: HPPIHVPAGRSAVAAGPDSASTF*SGLGIP
Trigger: GGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGA...ATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGGTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp TCGGTGCTTCACGTACTGTGCATAAAGGCTGAACTGGTCCCCGTGGCGAAGGAACCCATCCCTCTGCAGTaGCGTCAGCCGGGGATCTGC +
Preference number: 2 (lower is better)
Translates to: SVLHVLCIKAELVPVAKEPIPLQ*RQPGIC
Trigger: GCAGATCCCCGGCTGACGGCACTGCAGAGGGATGGG...TTCCTTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGTACGTGAAGCACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAAGAAGTGCCGCTGCTCTTGCTaGTGCACGTGCAGGTTGGAG +
Preference number: 2 (lower is better)
Translates to: PASRAKPSSTHSCACWKKCRCSC*CTCRLE
Trigger: CTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCA...CTTCTTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CTCGTCCACTTCCTGATACAGTGTAGCTGGGCCTTGGCCCTCCAGCTTGCTGCTTGCCGCTGCTCTTGCTaGTGCACGTGCAGGTTGGAG +
Preference number: 2 (lower is better)
Translates to: LVHFLIQCSWALALQLAACRCSC*CTCRLE
Trigger: CTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCA...AGCAGCAAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAGGAAGTGGACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GACCTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAACACTGCCGCTGCTCTTaGTGCTGCACGTGCAGGTTG +
Preference number: 2 (lower is better)
Translates to: DLSAESTESQLCLLQGRQHCRCS*CCTCRL
Trigger: CAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTG...TTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGCCCCGGGCCCGAGAGCCACTaGAACACCTGCTGGAGTCGC +
Preference number: 2 (lower is better)
Translates to: RNHNSKQSPLSPMFSVSPGPESH*NTCWSR
Trigger: GCGACTCCAGCAGGTGTTGCAGTGGCTCTCGGGCCC...GGGGCTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GAGCAGGGCACTCAGCGTCCGCTCCCCAAGGGCTTTGATGTCCAGGAAGGGTTTAGGCATAGCAAAGCTTaGCAGCTGCTCCTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: EQGTQRPLPKGFDVQEGFRHSKA*QLLLPW
Trigger: CCAGGGGAGGAGCAGCTGGCAAGCTTTGCTATGCCT...AAACCCTTCCTGGACATCAAAGCCCTTGGGGAGCGGACGCTGAGTGCCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAAGCTGTTCCAGAGGCTaGTGCAGGGCTCGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: AAETTTQSRVRCPRCFLSSCSRG*CRARGR
Trigger: CCTGCCCCGAGCCCTGCAGCAGCCTCTGGAACAGCT...TGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGGAGTGCTGGAGGCAGTaGAGGTGCCTGACGAAGGTC +
Preference number: 2 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQECWRQ*RCLTKV
Trigger: GACCTTCGTCAGGCACCTCCACTGCCTCCAGCACTC...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR-3UTR TCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCAGCCCAAAGTGTGCTaGGAGGAGAAGCTGCACGCA +
Preference number: 2 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQQPKVC*EEKLHA
Trigger: TGCGTGCAGCTTCTCCTCTCAGCACACTTTGGGCTG...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp GACCTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGCAATGTGGCTGCTCTaGCTCCTGCAGGAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: DLSAESTESQLCLLQGRQAMWLL*LLQEKA
Trigger: TGCCTTCTCCTGCAGGAGTCAGAGCAGCCACATTGC...TTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp GTGACCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTTTTCAGATCATTCTCTaGCAGCACCTCAGCACCCTG +
Preference number: 2 (lower is better)
Translates to: VTSRPRISTALGGLPSASFQIIL*QHLSTL
Trigger: CAGGGTGCTGAGGTGCTGTCAGAGAATGATCTGAAA...AGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGGCAAGCAATGTGGCTaGTCTGACTCCTGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCGKQCG*SDSCRR
Trigger: TCTCCTGCAGGAGTCAGAGCAGCCACATTGCTTGCC...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp AACAGGAGGAGATGCTCGAAGAGAAAGACATGGCGAAGGCACTTCTTTCGGCCAGGCCCTCCAGCTTGCTaGTGGGAGTGGAGCGCAGCC +
Preference number: 2 (lower is better)
Translates to: NRRRCSKRKTWRRHFFRPGPPAC*WEWSAA
Trigger: GGCTGCGCTCCACTCCCAGCAGCAAGCTGGAGGGCC...TGGCCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CCCTTGCTTAAGGGACTGAGCGCAGCCAGACCATTCTCCAGTTTGTGTCGGTGCCACTGCCGCTGCTCTTaGTGCTGCACGTGCAGGTTG +
Preference number: 2 (lower is better)
Translates to: PLLKGLSAARPFSSLCRCHCRCS*CCTCRL
Trigger: CAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTG...GCACCGACACAAACTGGAGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp ACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCGCAGGCACTGCCGCTaGTCTTGCTGCTGCACGTGC +
Preference number: 2 (lower is better)
Translates to: TQGGHVILFTGNQLRHQPRRHCR*SCCCTC
Trigger: GCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCG...CGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCTGCTGTCAGACACCAGCCGCTaGTGGGCACTGATGCTTCGC +
Preference number: 2 (lower is better)
Translates to: GGHVILFTGNQLRHQPLLSDTSR*WALMLR
Trigger: GCGAAGCATCAGTGCCCAGCAGCGGCTGGTGTCTGA...CAGCAGCGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp AGCTCCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAATACAGTGGCCCAGGATaGGAAAGCACCGGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: SSCQPSKALIHPFMCLLEYSGPG*ESTGRG
Trigger: CCCTCTTCCGGTGCTTTCCCATCCTGGGCCACTGTA...TTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp TGGCGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCTCGATGCAAGGCTGCCAGGGAGGGCTaGCATGGGAGTGATGTCCTG +
Preference number: 2 (lower is better)
Translates to: WRRHFFRPQMTVKGSRCKAAREG*HGSDVL
Trigger: CAGGACATCACTCCCATGCCAGCCCTCCCTGGCAGC...CTTGCATCGAGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTCTCTGGGAGCCACTGTaGAGGAGACACATTCTCCCA +
Preference number: 2 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCLWEPL*RRHILP
Trigger: TGGGAGAATGTGTCTCCTCCACAGTGGCTCCCAGAG...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR CCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGGCTTCAGAGAGTGTGTaGAACCTCTGGGAGCCACTG +
Preference number: 2 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEASESV*NLWEPL
Trigger: CAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGC...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR TCA 90 bp CTCGTCCACTTCCTGATACAGTGTAGCTGGGCCTTGGCCCTCCAGCTTGCTGCTAGAATCAGCAGCCGCTaGACAAGGGGAGGATCTCCT +
Preference number: 2 (lower is better)
Translates to: LVHFLIQCSWALALQLAARISSR*TRGGSP
Trigger: AGGAGATCCTCCCCTTGTTCAGCGGCTGCTGATTCT...AGCAGCAAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAGGAAGTGGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp AACAGGAGGAGATGCTCGAAGAGAAAGACATGGCGAAGGCACTTCTTTCGGCCAGCCGCTGCTGGGCACTaGTGCTTCGCTTGCGCTCCA +
Preference number: 2 (lower is better)
Translates to: NRRRCSKRKTWRRHFFRPAAAGH*CFACAP
Trigger: TGGAGCGCAAGCGAAGCATCAGTGCCCAGCAGCGGC...TGGCCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCAGGGAAATTTGCTTaGCGTCCAGATCCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQPGKFA*RPDPRP
Trigger: AGGCCTGGGATCTGGACGTCAAGCAAATTTCCCTGG...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
3UTR-3UTR GCA 90 bp CACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGCACCCTCCTATTGTTTaGATAGCTTCATTGCTTGTG +
Preference number: 2 (lower is better)
Translates to: HLLESPQALPLLLLLHVQHPPIV*IASLLV
Trigger: CACAAGCAATGAAGCTATGCAAACAATAGGAGGGTG...CTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCTGCTGTCTGCCAGCACCTTCTaGAGTGGCTTGGGCATTCCC +
Preference number: 2 (lower is better)
Translates to: GGHVILFTGNQLRHQPLLSASTF*SGLGIP
Trigger: GGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGA...CAGCAGCGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGTCTGGTGAGGTTGCCTaGAGAGTGTATGCCTCTCGT +
Preference number: 2 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAESGEVA*RVYASR
Trigger: ACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGCCTCCAGCTCCTCAATaGCCTGCCGTACCGAGCCCA +
Preference number: 2 (lower is better)
Translates to: RRHQARETRDSGGRAILWPPAPQ*PAVPSP
Trigger: TGGGCTCGGTACGGCAGGCCATTGAGGAGCTGGAGG...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGCCTCCAGCTTGCTGCTaGGAGTGGAGCGCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: RRHQARETRDSGGRAILWPPACC*EWSAAS
Trigger: TGAGGCTGCGCTCCACTCCCAGCAGCAAGCTGGAGG...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGCCCCGCTGCACGTGCAGGTTaGAGAGGCGCACAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: RNHNSKQSPLSPMFSVSPAARAG*RGAQAG
Trigger: ACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGC...GGGGCTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAATAGTCCTCTCCACATaGGGCCAGGGAGCAATGGGA +
Preference number: 2 (lower is better)
Translates to: LQSVCLSCTPPPKPQLKAIVLST*GQGAMG
Trigger: TCCCATTGCTCCCTGGCCCCATGTGGAGAGGACTAT...TGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGCCCACCTCCAGGGTATaGAGGCAAGCAATGTGGCTG +
Preference number: 2 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQPTSRV*RQAMWL
Trigger: CAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGG...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGAATAAACAGGTGTCTTaGGGCACAGGGCCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQNKQVS*GTGPCV
Trigger: GACACAGGGCCCTGTGCCTCAAGACACCTGTTTATT...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR GCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTTCCATTATGCCCCACTaGCATCCCAGCCCAAAGTGT +
Preference number: 2 (lower is better)
Translates to: LSAESTESQLCLLQGRQGSIMPH*HPSPKC
Trigger: ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGA...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp AACAGGAGGAGATGCTCGAAGAGAAAGACATGGCGAAGGCACTTCTTTCGGCCACCCAGGGCTCCATTATaGCCCACTGCCATCCCAGCC +
Preference number: 2 (lower is better)
Translates to: NRRRCSKRKTWRRHFFRPPRAPL*PTAIPA
Trigger: GGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGG...TGGCCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp AACAGGAGGAGATGCTCGAAGAGAAAGACATGGCGAAGGCACTTCTTTCGGCCACAGCTCTTGGGGGCCTaGCCTCTGCTTCTGGAGCCA +
Preference number: 2 (lower is better)
Translates to: NRRRCSKRKTWRRHFFRPQLLGA*PLLLEP
Trigger: TGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTG...TGGCCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGATCAGACACCAGCCGCTaGTGGGCACTGATGCTTCGC +
Preference number: 2 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRSDTSR*WALMLR
Trigger: GCGAAGCATCAGTGCCCAGCAGCGGCTGGTGTCTGA...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CTCGTCCACTTCCTGATACAGTGTAGCTGGGCCTTGGCCCTCCAGCTTGCTGCTGGCAGGGCAATACTCTaGTCGTTAGACCTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: LVHFLIQCSWALALQLAAGRAIL*SLDLLC
Trigger: ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCC...AGCAGCAAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAGGAAGTGGACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTGGAGCCAGTCCACAGAGTTCAGTTaGAAGGTCATCATGAATGAG +
Preference number: 2 (lower is better)
Translates to: QASDQHSSWGPALCFWSQSTEFS*KVIMNE
Trigger: CTCATTCATGATGACCTTCCAACTGAACTCTGTGGA...CTGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp TGGCGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCTCGATGCAAGCAGCACCTTCTGCAGTaGCTTGGGCATTCCCACTGC +
Preference number: 2 (lower is better)
Translates to: WRRHFFRPQMTVKGSRCKQHLLQ*LGHSHC
Trigger: GCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTG...CTTGCATCGAGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGCAGCCCAAAGTGTGCTaGGAGGAGAAGCTGCACGCA +
Preference number: 2 (lower is better)
Translates to: RRHQARETRDSGGRAILWQPKVC*EEKLHA
Trigger: TGCGTGCAGCTTCTCCTCTCAGCACACTTTGGGCTG...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAGCAATGTGGCTGCTCTaGCTCCTGCAGGAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRAMWLL*LLQEKA
Trigger: TGCCTTCTCCTGCAGGAGTCAGAGCAGCCACATTGC...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp AGGCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTCCCACCTCCAGGGTATaGAGGCAAGCAATGTGGCTG +
Preference number: 2 (lower is better)
Translates to: RLGLFLGPGDTSPEESSVPTSRV*RQAMWL
Trigger: CAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGG...AACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTGTATCTCTACCCAGTaGCTGGGAGAGGGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: RRHQARETRDSGGRAILWCISTQ*LGEGSL
Trigger: CAGGGACCCCTCTCCCAGTCACTGGGTAGAGATACA...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCCTTGGGCATTCCCACTaGCTCCTCTTCCTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFLGHSH*LLFLWL
Trigger: GAGCCAGAGGAAGAGGAGGCAGTGGGAATGCCCAAG...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTTGCAAGAGCTGTCCCTaGTCCTTCAGATCTATCTCA +
Preference number: 2 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCCKSCP*SFRSIS
Trigger: TGAGATAGATCTGAAGGAGCAGGGACAGCTCTTGCA...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CCCTTGCTTAAGGGACTGAGCGCAGCCAGACCATTCTCCAGTTTGTGTCGGTGCATGTCCTGGATACAGTaGCCCAGGATGGGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: PLLKGLSAARPFSSLCRCMSWIQ*PRMGKH
Trigger: GTGCTTTCCCATCCTGGGCCACTGTATCCAGGACAT...GCACCGACACAAACTGGAGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCGCTGCCAGGGAGGGCTaGCATGGGAGTGATGTCCTG +
Preference number: 2 (lower is better)
Translates to: DVAIFGTIPVIPIAESCPAAREG*HGSDVL
Trigger: CAGGACATCACTCCCATGCCAGCCCTCCCTGGCAGC...GGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR CCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGGAGCCCAGCACACCTTaGCACAGGCGACATAGCCTT +
Preference number: 2 (lower is better)
Translates to: RRHQARETRDSGGRAILWEPSTP*HRRHSL
Trigger: AAGGCTATGTCGCCTGTGCCAAGGTGTGCTGGGCTC...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTAGGGCCTCCCGTGCCTaGGCCAGGCGCTCCTGGACC +
Preference number: 2 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIARASRA*ARRSWT
Trigger: GGTCCAGGAGCGCCTGGCCCAGGCACGGGAGGCCCT...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp ACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGGCACCTTCTGGGAGGTaGCATTCTCCTCCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: TQGGHVILFTGNQLRHQPAPSGR*HSPPEP
Trigger: TGGCTCTGGAGGAGAATGCCACCTCCCAGAAGGTGC...CGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGGGGCTGGCATGGGAGTaGTGTCCTGGATACAGTGGC +
Preference number: 2 (lower is better)
Translates to: VDLAEMILLRESQGVRKEGLAWE*CPGYSG
Trigger: GCCACTGTATCCAGGACATCACTCCCATGCCAGCCC...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCGGATCTCCTGAGTCCTaGAGTTGGCTCAAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFGSPES*SWLKAG
Trigger: TCCTGCCTTGAGCCAACTTCAGGACTCAGGAGATCC...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR-3UTR GCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCTTCCTCTGGCTCTGCTaGTCCCTCCAGCTCCTCAAT +
Preference number: 2 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFFLWLC*SLQLLN
Trigger: ATTGAGGAGCTGGAGGGAGCAGCAGAGCCAGAGGAA...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCATGCAAGAGCTGTCCCTaGTCCTTCAGATCTATCTCA +
Preference number: 2 (lower is better)
Translates to: LQSVCLSCTPPPKPQLKACKSCP*SFRSIS
Trigger: TGAGATAGATCTGAAGGAGCAGGGACAGCTCTTGCA...TGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCATCTGGTGAGGTTGCCTaGAGAGTGTATGCCTCTCGT +
Preference number: 2 (lower is better)
Translates to: AAETTTQSRVRCPRCFLSSGEVA*RVYASR
Trigger: ACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA...TGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGAGAAAGTGTGTCCGGTaGAAGCTGCGAAGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQRKCVR*KLRSLS
Trigger: GGAAAGGCTTCGCAGCTTCCACCGGACACACTTTCT...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACGAAGGTCATCATGAATaGGAATCAGCAGCCGCTGAA +
Preference number: 2 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHEGHHE*ESAAAE
Trigger: TTCAGCGGCTGCTGATTCTCATTCATGATGACCTTC...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGGGCTGCTCTGACTCCTaGAGGAGAAGGCACCAAGCT +
Preference number: 2 (lower is better)
Translates to: VDLAEMILLRESQGVRKEGCSDS*RRRHQA
Trigger: AGCTTGGTGCCTTCTCCTGCAGGAGTCAGAGCAGCC...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp TGTCTCCACAGCAGCTGGGCAATAGAACTTGTCCACTTGAGTTTGATCTCTGGTAGTGTATGCCTCTCGTaGACGCCGCCGCCGAAACCA +
Preference number: 2 (lower is better)
Translates to: CLHSSWAIELVHLSLISGSVCLS*TPPPKP
Trigger: TGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACT...ACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGTACAGTGGCCCAGGATaGGAAAGCACCGGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLYSGPG*ESTGRG
Trigger: CCCTCTTCCGGTGCTTTCCCATCCTGGGCCACTGTA...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAGGAGTAGGTGCAGTGTaGGAGAAGGAGCTTCAGAGA +
Preference number: 2 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRGVGAV*EKELQR
Trigger: TCTCTGAAGCTCCTTCTCCCACACTGCACCTACTCC...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR CCA 90 bp GAGCAGGGCACTCAGCGTCCGCTCCCCAAGGGCTTTGATGTCCAGGAAGGGTTTTCCACAGAGTTCAGTTaGAAGGTCATCATGAATGAG +
Preference number: 2 (lower is better)
Translates to: EQGTQRPLPKGFDVQEGFSTEFS*KVIMNE
Trigger: CTCATTCATGATGACCTTCCAACTGAACTCTGTGGA...AAACCCTTCCTGGACATCAAAGCCCTTGGGGAGCGGACGCTGAGTGCCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGCTCCTCTCTAGCTCTTaGCAGCGGGCCTGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLLLSSS*QRAWQR
Trigger: CCGCTGCCAGGCCCGCTGCCAAGAGCTAGAGAGGAG...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp GCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCACTGGCTCACTCAAGGTaGCCACGTAATCTTGTTCAC +
Preference number: 2 (lower is better)
Translates to: AAETTTQSRVRCPRCFLSLAHSR*PRNLVH
Trigger: GTGAACAAGATTACGTGGCCACCTTGAGTGAGCCAG...TGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGGAAGGTCATCATGAATaGGAATCAGCAGCCGCTGAA +
Preference number: 2 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQEGHHE*ESAAAE
Trigger: TTCAGCGGCTGCTGATTCTCATTCATGATGACCTTC...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTGCCGCTGCTGGGCACTaGTGCTTCGCTTGCGCTCCA +
Preference number: 2 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAAAAGH*CFACAP
Trigger: TGGAGCGCAAGCGAAGCATCAGTGCCCAGCAGCGGC...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAGGGGAGGATCTCCTaGGTCCTGAAGTTGGCTCAA +
Preference number: 2 (lower is better)
Translates to: TPVDLAEMILLRESQGVRKGRIS*VLKLAQ
Trigger: TTGAGCCAACTTCAGGACTCAGGAGATCCTCCCCTT...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR-3UTR GCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCGCTGAGAGGAGAAGCTaGACGCAAGTTCTGGATCTT +
Preference number: 2 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFAERRS*TQVLDL
Trigger: AAGATCCAGAACTTGCGTGCAGCTTCTCCTCTCAGC...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGCCCAGGGCTCCATTATaGCCCACTGCCATCCCAGCC +
Preference number: 2 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRPRAPL*PTAIPA
Trigger: GGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGG...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR GCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTCACCCTCCTATTGTTTaGATAGCTTCATTGCTTGTG +
Preference number: 2 (lower is better)
Translates to: LSAESTESQLCLLQGRQGHPPIV*IASLLV
Trigger: CACAAGCAATGAAGCTATGCAAACAATAGGAGGGTG...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp CGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGCCCCCTGAACAGGAGGAGATaGTCGAAGAGAAAGACATGG +
Preference number: 2 (lower is better)
Translates to: RNHNSKQSPLSPMFSVSPLNRRR*SKRKTW
Trigger: CCATGTCTTTCTCTTCGAGCATCTCCTCCTGTTCAG...GGGGCTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATAGGGCCTCCCGTGCCTaGGCCAGGCGCTCCTGGACC +
Preference number: 2 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYRASRA*ARRSWT
Trigger: GGTCCAGGAGCGCCTGGCCCAGGCACGGGAGGCCCT...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp AGGCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTCTGGCTCACTCAAGGTaGCCACGTAATCTTGTTCAC +
Preference number: 2 (lower is better)
Translates to: RLGLFLGPGDTSPEESSVLAHSR*PRNLVH
Trigger: GTGAACAAGATTACGTGGCCACCTTGAGTGAGCCAG...AACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp AACAGGAGGAGATGCTCGAAGAGAAAGACATGGCGAAGGCACTTCTTTCGGCCAGTTGGAAGGTCATCATaGATGAGAATCAGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: NRRRCSKRKTWRRHFFRPVGRSS*MRISSR
Trigger: GCGGCTGCTGATTCTCATTCATGATGACCTTCCAAC...TGGCCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTAGCCACTGCAACACCTaGTGGAGTCGCCGCAGGCAC +
Preference number: 2 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIASHCNT*WSRRRH
Trigger: GTGCCTGCGGCGACTCCAGCAGGTGTTGCAGTGGCT...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCAGTGTCCGGTGGAAGCTaGGAAGCCTTTCCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASVSGGS*EAFPGH
Trigger: GTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCGTGCTTCACGTACTGTaGATAAAGGCTGAACTGGTC +
Preference number: 2 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFVLHVL*IKAELV
Trigger: GACCAGTTCAGCCTTTATGCACAGTACGTGAAGCAC...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp AGGCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTAGGGTTTATTCCCAATaGCCATGGACACCATCTGCT +
Preference number: 2 (lower is better)
Translates to: RLGLFLGPGDTSPEESSVRVYSQ*PWTPSA
Trigger: AGCAGATGGTGTCCATGGGCATTGGGAATAAACCCT...AACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp TGTCTCCACAGCAGCTGGGCAATAGAACTTGTCCACTTGAGTTTGATCTCTGGTCATTCATGTGCCTGCTaGAAGAAGCGCTGTAGCCGC +
Preference number: 2 (lower is better)
Translates to: CLHSSWAIELVHLSLISGHSCAC*KKRCSR
Trigger: GCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATG...ACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGGCTGAGAGGAGAAGCTaGACGCAAGTTCTGGATCTT +
Preference number: 2 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAEAERRS*TQVLDL
Trigger: AAGATCCAGAACTTGCGTGCAGCTTCTCCTCTCAGC...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR GCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTAGTGTATGCCTCTCGTaGACGCCGCCGCCGAAACCA +
Preference number: 2 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIASVCLS*TPPPKP
Trigger: TGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACT...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCAGTCGCCGCAGGCACTaGCGCTGCTCTTGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSSRRRH*RCSCCC
Trigger: GCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACT...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATAGCTGTTCCAGAGGCTaGTGCAGGGCTCGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYSCSRG*CRARGR
Trigger: CCTGCCCCGAGCCCTGCAGCAGCCTCTGGAACAGCT...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATGGAGAGGGGTCCCTGTaGCCTCCTAACTCCCACTGC +
Preference number: 2 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYGEGSL*PPNSHC
Trigger: GCAGTGGGAGTTAGGAGGTCACAGGGACCCCTCTCC...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCCCACCTCAGTGCTGGTaGCCTCCAGGCCTCGGATCA +
Preference number: 2 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSPPQCW*PPGLGS
Trigger: TGATCCGAGGCCTGGAGGTCACCAGCACTGAGGTGG...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTGGCCCTGTGTCTGTCTaGCTACCTATGTCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAGPVSV*LPMSCF
Trigger: GAAGCAGGACATAGGTAGGCAGACAGACACAGGGCC...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR GCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATCGTCAGCCGGGGATCTaGCAGCACCTTCTGCAGTGG +
Preference number: 2 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYRQPGI*QHLLQW
Trigger: CCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACG...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGGGCAGGGCAATACTCTaGTCGTTAGACCTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLGRAIL*SLDLLC
Trigger: ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCC...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGTGTGACACCTCAGAATaGAGTCACCAGGGACTCCAG +
Preference number: 2 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLCDTSE*SHQGLQ
Trigger: CTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACA...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGATATCCAGCACCTTCTaGGAGGTGGCATTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLISSTF*EVAFSS
Trigger: GGAGGAGAATGCCACCTCCCAGAAGGTGCTGGATAT...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGTGCCTACCTATGTCCTaGTTCCCTCTTTGGGTCCTT +
Preference number: 2 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLCLPMS*FPLWVL
Trigger: AAGGACCCAAAGAGGGAAGCAGGACATAGGTAGGCA...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR GCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCAATGGACACCATCTGCTaGACTCGGAGCTCCTTGTTG +
Preference number: 2 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASMDTIC*TRSSLL
Trigger: CAACAAGGAGCTCCGAGTGCAGCAGATGGTGTCCAT...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATGTGACACCTCAGAATaGAGTCACCAGGGACTCCAG +
Preference number: 2 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASCDTSE*SHQGLQ
Trigger: CTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACA...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCGCTTGCTGCTGGGAGTaGAGCGCAGCCTCATCAGGA +
Preference number: 2 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSACCWE*SAASSG
Trigger: TCCTGATGAGGCTGCGCTCCACTCCCAGCAGCAAGC...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGTGTCTCCACAGCAGCTaGGCAATAGAACTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLCLHSS*AIELVH
Trigger: GTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCCCCACCTCCAGGGTATaGAGGCAAGCAATGTGGCTG +
Preference number: 2 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSPTSRV*RQAMWL
Trigger: CAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGG...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR GCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCAGCTGAGAGGAGAAGCTaGACGCAAGTTCTGGATCTT +
Preference number: 2 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASAERRS*TQVLDL
Trigger: AAGATCCAGAACTTGCGTGCAGCTTCTCCTCTCAGC...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR CAA 90 bp TACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTaGCATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAG +
Preference number: 2 (lower is better)
Translates to: YIYKVYGSPVTPSYC*HSFIACDTSEWSHQ
Trigger: CTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCACATTTTGAGAACTGCTaGACTGTGCTGGATCCCAGT +
Preference number: 2 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASHFENC*TVLDPS
Trigger: ACTGGGATCCAGCACAGTCCAGCAGTTCTCAAAATG...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR GCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTCCATTATGCCCCACTaGCATCCCAGCCCAAAGTGT +
Preference number: 2 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSSIMPH*HPSPKC
Trigger: ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGA...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCATGTCCTGGATACAGTaGCCCAGGATGGGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSMSWIQ*PRMGKH
Trigger: GTGCTTTCCCATCCTGGGCCACTGTATCCAGGACAT...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR TCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCGAGTTTGATCTCTGGTaGGGTTGCCTGCAGAGTGTA +
Preference number: 2 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSEFDLW*GCLQSV
Trigger: TACACTCTGCAGGCAACCTCACCAGAGATCAAACTC...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTATTCCCAATGCCCATaGACACCATCTGCTGCACTC +
Preference number: 2 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYYSQCP*TPSAAL
Trigger: GAGTGCAGCAGATGGTGTCCATGGGCATTGGGAATA...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CAA 90 bp CCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTaGAGGGAAAGTGCTCAAGTTATTTATCACCTTAATCCAGAGGAC +
Preference number: 2 (lower is better)
Translates to: PSSLGFIFCVLVKGW*RESAQVIYHLNPED
Trigger: GTCCTCTGGATTAAGGTGATAAATAACTTGAGCACTTTCCCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR CCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCGTTCTAGTTAAGGGCTaGTTGAGGGAAAGTGCTCAA +
Preference number: 2 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSVLVKG*LRESAQ
Trigger: TTGAGCACTTTCCCTCAACCAGCCCTTAACTAGAAC...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR GCA 72 bp CCAGGTCCAGGGCCAGGGCCCGCATCTCCTGGAAGGTaGCGGCACTGGGCTCTGGGGCCCGCCGCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: PGPGPGPASPGR*RHWALGPAAGP
Trigger: TGGCCCTGCGGCGGGCCCCAGAGCCCAGTGCCGGCACCTTCCAGGAGATGCGGGCCCTGGCCCTGGACCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp GCTCCCGGCGAAAGGCCGGGAAGGGAGGGGCCGGCATaGTCAAAGGATGACACGGCCACGGAGGCCCGGGTG +
Preference number: 3 (lower is better)
Translates to: APGERPGREGPA*SKDDTATEARV
Trigger: CACCCGGGCCTCCGTGGCCGTGTCATCCTTTGAGCATGCCGGCCCCTCCCTTCCCGGCCTTTCGCCGGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
3UTR CCA 72 bp GCTGGCACCGTCTGCCCGCCGTCGTCGGTAGCCCCGTaGGCTCGCCTCCTCTCCCACGTGTTGCTGGATCCT +
Preference number: 3 (lower is better)
Translates to: AGTVCPPSSVAP*ARLLSHVLLDP
Trigger: AGGATCCAGCAACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACGGTGCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGCCTTGGCCCTCCAGCTaGCTGCTGGGAGTGGAGCGC +
Preference number: 3 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQPWPSS*LLGVER
Trigger: GCGCTCCACTCCCAGCAGCAAGCTGGAGGGCCAAGG...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp CACAGCCACGCACCGCCTCCACGGCCAGCAGGTCTCTaGCACGGGCCTCTTGTTCCCGGAGCAGCTGTACAG +
Preference number: 3 (lower is better)
Translates to: HSHAPPPRPAGL*HGPLVPGAAVQ
Trigger: CTGTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCGTGGAGGCGGTGCGTGGCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 72 bp CCCCCTAGCCCGGCCCAGCAGCACGTGTTCCCGTGGTaGGCACGTCCTGTCTACCACCTCAGTGCTGGTGAC +
Preference number: 3 (lower is better)
Translates to: PPSPAQQHVFPW*ARPVYHLSAGD
Trigger: GTCACCAGCACTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGGCTAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp TGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTaGTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGG +
Preference number: 3 (lower is better)
Translates to: CWSRRRHCRCSC*CTCRLERRTSW
Trigger: CCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp ACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTaGTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGC +
Preference number: 3 (lower is better)
Translates to: TCWSRRRHCRCS*CCTCRLERRTS
Trigger: GCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp TGCAACACCTGCTGGAGTCGCCGCAGGCACTGCCGCTaGTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGC +
Preference number: 3 (lower is better)
Translates to: CNTCWSRRRHCR*SCCCTCRLERR
Trigger: GCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTGTTGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 72 bp GCTGTACAGCAGCCCCAAGGGCCCGGCACTCAGAACTaGGCTCAGGCCCAGCTTCCCTCAGGAGCTCCTCCA +
Preference number: 3 (lower is better)
Translates to: AVQQPQGPGTQN*AQAQLPSGAPP
Trigger: TGGAGGAGCTCCTGAGGGAAGCTGGGCCTGAGCTCAGTTCTGAGTGCCGGGCCCTTGGGGCTGCTGTACAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp AGCCACTGCAACACCTGCTGGAGTCGCCGCAGGCACTaGCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAG +
Preference number: 3 (lower is better)
Translates to: SHCNTCWSRRRH*RCSCCCTCRLE
Trigger: CTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTGTTGCAGTGGCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp CCTGAAGCTCCCGCAGAAAGTGTGTCCGGTGGAAGCTaGGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: PEAPAESVSGGS*EAFPGHSGQQP
Trigger: GGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACACACTTTCTGCGGGAGCTTCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 72 bp GCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATaGAGGCCACTCTCAACCTGCTCCAGCCGCTGTTCA +
Preference number: 3 (lower is better)
Translates to: ACWKKRCSRRAR*RPLSTCSSRCS
Trigger: TGAACAGCGGCTGGAGCAGGTTGAGAGTGGCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp TGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTaGAGTGGCTTGGGCATTCCCACTGCCTCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: CSAVSRGSASTF*SGLGIPTASSS
Trigger: GGAAGAGGAGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp GACAAGGTGTCCCCAGGCATAGCAAAGCTTGCCAGCTaGTCCTCCCCTGGGCCCGAGAGCCACTGCAACACC +
Preference number: 3 (lower is better)
Translates to: DKVSPGIAKLAS*SSPGPESHCNT
Trigger: GGTGTTGCAGTGGCTCTCGGGCCCAGGGGAGGAGCAGCTGGCAAGCTTTGCTATGCCTGGGGACACCTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp GCTCAAGGCAGGAATGAGTGCTGGAGGCAGTGGAGGTaGCTGACGAAGGTCCAGCAGGACGGACAGCCCCAG +
Preference number: 3 (lower is better)
Translates to: AQGRNECWRQWR*LTKVQQDGQPQ
Trigger: CTGGGGCTGTCCGTCCTGCTGGACCTTCGTCAGGCACCTCCACTGCCTCCAGCACTCATTCCTGCCTTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR CCA 72 bp GGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTaGAGAGGCGCACAAGCTGGTGAATGGCCTCGTCCA +
Preference number: 3 (lower is better)
Translates to: GTAAALAAARAG*RGAQAGEWPRP
Trigger: TGGACGAGGCCATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACGGATCAGCACAGCTCTaGGGGGCCTGCCCTCTGCTT +
Preference number: 3 (lower is better)
Translates to: SGEVACRVYASRARRRRNGSAQL*GACPLL
Trigger: AAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCC...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp AGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAATGCAGCTCCTCTGGCTaGGCCACTCTTTTCAGATCA +
Preference number: 3 (lower is better)
Translates to: SRPQCVGGGWRSPEAPAECSSSG*ATLFRS
Trigger: TGATCTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCA...TTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 72 bp GTGGTGAGCACGTCCTGTCTACCACCTCAGTGCTGGTaGCCTCCAGGCCTCGGATCAGCACAGCTCTTGGGG +
Preference number: 3 (lower is better)
Translates to: VVSTSCLPPQCW*PPGLGSAQLLG
Trigger: CCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCACCAGCACTGAGGTGGTAGACAGGACGTGCTCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 72 bp AAGGCAGGAATGAGTGCTGGAGGCAGTGGAGGTGCCTaGCGAAGGTCCAGCAGGACGGACAGCCCCAGTGTC +
Preference number: 3 (lower is better)
Translates to: KAGMSAGGSGGA*RRSSRTDSPSV
Trigger: GACACTGGGGCTGTCCGTCCTGCTGGACCTTCGTCAGGCACCTCCACTGCCTCCAGCACTCATTCCTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR-3UTR CAA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGTGCTGCACGTGCAGGTaGGAGAGGCGCACAAGCTGG +
Preference number: 3 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQCCTCR*ERRTSW
Trigger: CCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCA...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 72 bp GCCGCTGTTCAAAGATATCCAGCACCTTCTGGGAGGTaGCATTCTCCTCCAGAGCCAGGGCCTCCCGTGCCT +
Preference number: 3 (lower is better)
Translates to: AAVQRYPAPSGR*HSPPEPGPPVP
Trigger: AGGCACGGGAGGCCCTGGCTCTGGAGGAGAATGCCACCTCCCAGAAGGTGCTGGATATCTTTGAACAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp AGCTCCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAAACCTTCTGCAGTGGCTaGGGCATTCCCACTGCCTCC +
Preference number: 3 (lower is better)
Translates to: SSCQPSKALIHPFMCLLETFCSG*GIPTAS
Trigger: GGAGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGT...TTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp GGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCTGCTGTGCTGCACGTGCAGGTaGGAGAGGCGCACAAGCTGG +
Preference number: 3 (lower is better)
Translates to: GGHVILFTGNQLRHQPLLCCTCR*ERRTSW
Trigger: CCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCA...CAGCAGCGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp CCCTTGCTTAAGGGACTGAGCGCAGCCAGACCATTCTCCAGTTTGTGTCGGTGCGCACTGCCGCTGCTCTaGCTGCTGCACGTGCAGGTT +
Preference number: 3 (lower is better)
Translates to: PLLKGLSAARPFSSLCRCALPLL*LLHVQV
Trigger: AACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGC...GCACCGACACAAACTGGAGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGTCAGGGCCCTTGAGCTaGCTGAACAGGAGGAGATGC +
Preference number: 3 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAESGPLS*LNRRRC
Trigger: GCATCTCCTCCTGTTCAGCAAGCTCAAGGGCCCTGA...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp TGTAGCCGCAGGGCCCGATGGAGGCCACTCTCAACCTaGTCCAGCCGCTGTTCAAAGATATCCAGCACCTTC +
Preference number: 3 (lower is better)
Translates to: CSRRARWRPLST*SSRCSKISSTF
Trigger: GAAGGTGCTGGATATCTTTGAACAGCGGCTGGAGCAGGTTGAGAGTGGCCTCCATCGGGCCCTGCGGCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 72 bp GGGAGGGCTGGCATGGGAGTGATGTCCTGGATACAGTaGCCCAGGATGGGAAAGCACCGGAAGAGGGATAAC +
Preference number: 3 (lower is better)
Translates to: GRAGMGVMSWIQ*PRMGKHRKRDN
Trigger: GTTATCCCTCTTCCGGTGCTTTCCCATCCTGGGCCACTGTATCCAGGACATCACTCCCATGCCAGCCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR CCA 72 bp TCCTCAATGGCCTGCCGTACCGAGCCCAGCACACCTTaGCACAGGCGACATAGCCTTACCACTTCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: SSMACRTEPSTP*HRRHSLTTSWC
Trigger: ACACCAGGAAGTGGTAAGGCTATGTCGCCTGTGCCAAGGTGTGCTGGGCTCGGTACGGCAGGCCATTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 72 bp GCTCAGGCCCAGGGGGTGGCACTGGCTCACTCAAGGTaGCCACGTAATCTTGTTCACAGGCAATCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: AQAQGVALAHSR*PRNLVHRQSAQ
Trigger: CTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGTGAGCCAGTGCCACCCCCTGGGCCTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 72 bp CAAGTTCTGGATCTTCTCCAGGTCACAGAGGCGTGGTaGGGTCACTCAGGGCTCGAGCATGACTCTGTCGGG +
Preference number: 3 (lower is better)
Translates to: QVLDLLQVTEAW*GHSGLEHDSVG
Trigger: CCCGACAGAGTCATGCTCGAGCCCTGAGTGACCCCACCACGCCTCTGTGACCTGGAGAAGATCCAGAACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp CACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGACACCCTCCTATTGTTaGCATAGCTTCATTGCTTGT +
Preference number: 3 (lower is better)
Translates to: HLLESPQALPLLLLLHVQTPSYC*HSFIAC
Trigger: ACAAGCAATGAAGCTATGCAAACAATAGGAGGGTGT...CTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGACCTTCTGCAGTGGCTaGGGCATTCCCACTGCCTCC +
Preference number: 3 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQTFCSG*GIPTAS
Trigger: GGAGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGT...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp CCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAATGGAGGTAATGAAGAGTaGTGTTCAGCGTGTCTCGGG +
Preference number: 3 (lower is better)
Translates to: PLLLLLHVQVGEAHKLVNGGNEE*CSACLG
Trigger: CCCGAGACACGCTGAACACAACTCTTCATTACCTCC...ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556399.5
3UTR GCA 72 bp TCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTaGAGGGCAGACAAGGTGTCCCCAGGCATAGCAAAG +
Preference number: 3 (lower is better)
Translates to: SALKARNRSSVS*RADKVSPGIAK
Trigger: CTTTGCTATGCCTGGGGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp CTTGTCCACTTGAGTTTGATCTCTGGTGAGGTTGCCTaGAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGA +
Preference number: 3 (lower is better)
Translates to: LVHLSLISGEVA*RVYASRARRRR
Trigger: TCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGAGATCAAACTCAAGTGGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 72 bp GTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTaGGAGCCACTGTGGAGGAGACACATTCTCCCAGGC +
Preference number: 3 (lower is better)
Translates to: VGEGASESVWNL*EPLWRRHILPG
Trigger: GCCTGGGAGAATGTGTCTCCTCCACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR CCA 72 bp ACGCAAGTTCTGGATCTTCTCCAGGTCACAGAGGCGTaGTGGGGTCACTCAGGGCTCGAGCATGACTCTGTC +
Preference number: 3 (lower is better)
Translates to: TQVLDLLQVTEA*WGHSGLEHDSV
Trigger: GACAGAGTCATGCTCGAGCCCTGAGTGACCCCACCACGCCTCTGTGACCTGGAGAAGATCCAGAACTTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp CCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAGTGTGACACCCTCCTATTGTTaGCATAGCTTCATTGCTTGT +
Preference number: 3 (lower is better)
Translates to: PQCVGGGWRSPEAPAESVTPSYC*HSFIAC
Trigger: ACAAGCAATGAAGCTATGCAAACAATAGGAGGGTGT...CACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGGGTGGCCACGTAATCTaGTTCACAGGCAATCAGCTC +
Preference number: 3 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQGGHVI*FTGNQL
Trigger: GAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTGCACTCGGAGCTCCTaGTTGTGGGCTGCCTGTCTC +
Preference number: 3 (lower is better)
Translates to: RRHQARETRDSGGRAILWCTRSS*LWAACL
Trigger: GAGACAGGCAGCCCACAACAAGGAGCTCCGAGTGCA...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 72 bp GTTTGTGTCGGTGCTTCACGTACTGTGCATAAAGGCTaGACTGGTCCCCGTGGCGAAGGAAGCAGGCCCCAA +
Preference number: 3 (lower is better)
Translates to: VCVGASRTVHKG*TGPRGEGSRPQ
Trigger: TTGGGGCCTGCTTCCTTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGTACGTGAAGCACCGACACAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp AGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATaGCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGA +
Preference number: 3 (lower is better)
Translates to: REEIQRSPRAPL*PTAIPAQSVLR
Trigger: TCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp CACCATCTGCTGCACTCGGAGCTCCTTGTTGTGGGCTaGCTGTCTCCACAGCAGCTGGGCAATAGAACTTGT +
Preference number: 3 (lower is better)
Translates to: HHLLHSELLVVG*LSPQQLGNRTC
Trigger: ACAAGTTCTATTGCCCAGCTGCTGTGGAGACAGGCAGCCCACAACAAGGAGCTCCGAGTGCAGCAGATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp AACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTaGCTACCTATGTCCTGCTTCCCTCTTTGGGTCCTT +
Preference number: 3 (lower is better)
Translates to: NRCLEAQGPVSV*LPMSCFPLWVL
Trigger: AAGGACCCAAAGAGGGAAGCAGGACATAGGTAGGCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR GCA 72 bp AAGGGTTTATTCCCAATGCCCATGGACACCATCTGCTaGACTCGGAGCTCCTTGTTGTGGGCTGCCTGTCTC +
Preference number: 3 (lower is better)
Translates to: KGLFPMPMDTIC*TRSSLLWAACL
Trigger: GAGACAGGCAGCCCACAACAAGGAGCTCCGAGTGCAGCAGATGGTGTCCATGGGCATTGGGAATAAACCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 72 bp GCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTaGAGGAGACACATTCTCCCAGGCTCATACACAGTC +
Preference number: 3 (lower is better)
Translates to: ASESVWNLWEPL*RRHILPGSYTV
Trigger: GACTGTGTATGAGCCTGGGAGAATGTGTCTCCTCCACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR CAA 90 bp TGGCGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCTCGATGCAAGTGCAGCTCCTCTGGCTaGGCCACTCTTTTCAGATCA +
Preference number: 3 (lower is better)
Translates to: WRRHFFRPQMTVKGSRCKCSSSG*ATLFRS
Trigger: TGATCTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCA...CTTGCATCGAGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 72 bp CATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTaGGAGGAGAAGCTGCACGCAAGTTCTGGATCTTCT +
Preference number: 3 (lower is better)
Translates to: HYAPLPSQPKVC*EEKLHASSGSS
Trigger: AGAAGATCCAGAACTTGCGTGCAGCTTCTCCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR CCA 72 bp AGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTaGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAG +
Preference number: 3 (lower is better)
Translates to: RETRDSGGRAIL*SLDLLCVQEAE
Trigger: CTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTCCTTGGCCCTCCAGCTaGCTGCTGGGAGTGGAGCGC +
Preference number: 3 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAPWPSS*LLGVER
Trigger: GCGCTCCACTCCCAGCAGCAAGCTGGAGGGCCAAGG...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 72 bp CAAGTTCTCACGCACTGTGGCCTGAGGACCTCATTTTaGGAACTGCTGGACTGTGCTGGATCCCAGTTTGTC +
Preference number: 3 (lower is better)
Translates to: QVLTHCGLRTSF*ELLDCAGSQFV
Trigger: GACAAACTGGGATCCAGCACAGTCCAGCAGTTCTCAAAATGAGGTCCTCAGGCCACAGTGCGTGAGAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR TCA 72 bp CTATTGCAGAGTCGTGTCCCCAATAAACAGGTGTCTTaGGGCACAGGGCCCTGTGTCTGTCTGCCTACCTAT +
Preference number: 3 (lower is better)
Translates to: LLQSRVPNKQVS*GTGPCVCLPTY
Trigger: ATAGGTAGGCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGACTCTGCAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR GCA 72 bp ACCATTCTCCAGTTTGTGTCGGTGCTTCACGTACTGTaGATAAAGGCTGAACTGGTCCCCGTGGCGAAGGAA +
Preference number: 3 (lower is better)
Translates to: TILQFVSVLHVL*IKAELVPVAKE
Trigger: TTCCTTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGTACGTGAAGCACCGACACAAACTGGAGAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp CCTTCAGGGCCCTTGAGCTTGCTGAACAGGAGGAGATaGTCGAAGAGAAAGACATGGCGAAGGCACTTCTTT +
Preference number: 3 (lower is better)
Translates to: PSGPLSLLNRRR*SKRKTWRRHFF
Trigger: AAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTTCAGCAAGCTCAAGGGCCCTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 72 bp TGTGACCTCCTAACTCCCACTGCAGCTCCTCTGGCTTaGCCACTCTTTTCAGATCATTCTCTGACAGCACCT +
Preference number: 3 (lower is better)
Translates to: CDLLTPTAAPLA*PLFSDHSLTAP
Trigger: AGGTGCTGTCAGAGAATGATCTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCAGTGGGAGTTAGGAGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp CTCGTCCACTTCCTGATACAGTGTAGCTGGGCCTTGGCCCTCCAGCTTGCTGCTGTTTGCATAGCTTCATaGCTTGTGACACCTCAGAAT +
Preference number: 3 (lower is better)
Translates to: LVHFLIQCSWALALQLAAVCIAS*LVTPQN
Trigger: ATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAAC...AGCAGCAAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAGGAAGTGGACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGCCCCCTTCAGGGCCCTaGAGCTTGCTGAACAGGAGG +
Preference number: 3 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLPPSGP*SLLNRR
Trigger: CCTCCTGTTCAGCAAGCTCAAGGGCCCTGAAGGGGG...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp GACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCGTCCTGCTTCCCTCTTaGGGTCCTTCTGTCAGGAAA +
Preference number: 3 (lower is better)
Translates to: DVAIFGTIPVIPIAESCPVLLPS*GPSVRK
Trigger: TTTCCTGACAGAAGGACCCAAAGAGGGAAGCAGGAC...GGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR TCA 72 bp CTCCTCTGGCTTGGCCACTCTTTTCAGATCATTCTCTaGCAGCACCTCAGCACCCTGAAATCCACAGAGTTC +
Preference number: 3 (lower is better)
Translates to: LLWLGHSFQIIL*QHLSTLKSTEF
Trigger: GAACTCTGTGGATTTCAGGGTGCTGAGGTGCTGTCAGAGAATGATCTGAAAAGAGTGGCCAAGCCAGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR TCA 72 bp GGCAATAGAACTTGTCCACTTGAGTTTGATCTCTGGTaGGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACG +
Preference number: 3 (lower is better)
Translates to: GNRTCPLEFDLW*GCLQSVCLSCT
Trigger: CGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTGCACTCGGAGCTCCTaGTTGTGGGCTGCCTGTCTC +
Preference number: 3 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIACTRSS*LWAACL
Trigger: GAGACAGGCAGCCCACAACAAGGAGCTCCGAGTGCA...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 72 bp TGTTTGCATAGCTTCATTGCTTGTGACACCTCAGAATaGAGTCACCAGGGACTCCAGTTGACCTGGCAGAGA +
Preference number: 3 (lower is better)
Translates to: CLHSFIACDTSE*SHQGLQLTWQR
Trigger: TCTCTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGGTGCTGGATCCCAGTTaGTCTGTGACCAGTTCAGCC +
Preference number: 3 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLVLDPS*SVTSSA
Trigger: GGCTGAACTGGTCACAGACAAACTGGGATCCAGCAC...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR CAA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAATAGAACTTGTCCACTaGAGTTTGATCTCTGGTGAG +
Preference number: 3 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRIELVH*SLISGE
Trigger: CTCACCAGAGATCAAACTCAAGTGGACAAGTTCTAT...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR-3UTR CAA 90 bp GACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCACACCCTCCTATTGTTaGCATAGCTTCATTGCTTGT +
Preference number: 3 (lower is better)
Translates to: DVAIFGTIPVIPIAESCPTPSYC*HSFIAC
Trigger: ACAAGCAATGAAGCTATGCAAACAATAGGAGGGTGT...GGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR GCA 72 bp AAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTaGATAGCTTCATTGCTTGTGACACCTCAGAATGGA +
Preference number: 3 (lower is better)
Translates to: KSTVPLSHPPIV*IASLLVTPQNG
Trigger: TCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR GCA 72 bp CGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTaGAGAGTCGTGTCCCCAATAAACAGGTGTCTTGAG +
Preference number: 3 (lower is better)
Translates to: RRYFWYDSCHPY*RVVSPINRCLE
Trigger: CTCAAGACACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR CAA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCGGTGGCCACGTAATCTaGTTCACAGGCAATCAGCTC +
Preference number: 3 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSGGHVI*FTGNQL
Trigger: GAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CCA 72 bp TATCACCCAAAGAGTTTGATAAGAAATGCAGAATATTaGGTTTTACCCCCAGGTTTCGATGCAGTAGCTCTG +
Preference number: 3 (lower is better)
Translates to: YHPKSLIRNAEY*VLPPGFDAVAL
Trigger: CAGAGCTACTGCATCGAAACCTGGGGGTAAAACCCAATATTCTGCATTTCTTATCAAACTCTTTGGGTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR-3UTR CAA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCGTTTGCATAGCTTCATaGCTTGTGACACCTCAGAAT +
Preference number: 3 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSVCIAS*LVTPQN
Trigger: ATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAAC...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTACTGGGCCCCTCCACTaGTGGCACCGTCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVTGPLH*WHRLPA
Trigger: GGCGGGCAGACGGTGCCAGCAGTGGAGGGGCCCAGT...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGCCCAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGGGCACAGGAACCTCCTaGACCCGCCCACCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SPGAPKFRRQLRPRGWHWGTGTS*TRPPPG
Trigger: CCCTGGGGGTGGGCGGGTGCAGGAGGTTCCTGTGCC...CCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTGTCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGCAGGGGAGGCTCCGGTaGTGCTCCCCTCGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: VSGGSCEAFPGHSGQQPRQGRLR*CSPRRV
Trigger: CACCCGGCGAGGGGAGCAGCACCGGAGCCTCCCCTG...CCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCTCAAGGGCCTCCCGTGCCTaGGCCAGGCGCTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: QVPRSSGVSSGPGGGTGSRASRA*ARRSWT
Trigger: GGTCCAGGAGCGCCTGGCCCAGGCACGGGAGGCCCT...TGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGGGGCCCCTCCACTGCTaGCACCGTCTGCCCGCCGTC +
Preference number: 4 (lower is better)
Translates to: SPQALPLLLLLHVQVGEAGPLHC*HRLPAV
Trigger: GACGGCGGGCAGACGGTGCCAGCAGTGGAGGGGCCC...CGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTCAGGGAGCAATGGGATaGGGCTGGCCGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVQGAMG*GWPWPR
Trigger: CCTGGGCCACGGCCAGCCCCATCCCATTGCTCCCTG...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGCCCAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGACTGCTGGCACCGTCTaGCCGCCGTCGTCGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SPGAPKFRRQLRPRGWHWTAGTV*PPSSVA
Trigger: GGCTACCGACGACGGCGGGCAGACGGTGCCAGCAGT...CCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTCAGGGGAGGCTCCGGTaGTGCTCCCCTCGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GTAAALAAARAGWRGAQAQGRLR*CSPRRV
Trigger: CACCCGGCGAGGGGAGCAGCACCGGAGCCTCCCCTG...AGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGCCCAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCGCAGGCACTGCCGCTaGTCTTGCTGCTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: SPGAPKFRRQLRPRGWHWRRHCR*SCCCTC
Trigger: GCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCG...CCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATCTGGCTCAGGCTCCATaGCTCGGCGCCGGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: LQCRQPGICQHLLQWLGHLAQAP*LGAGPR
Trigger: ACGCGGCCCGGCGCCGAGCCATGGAGCCTGAGCCAG...ATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCGCCCGGTGTCTCCGGTaGCGGCCCTTCCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGARCLR*RPFPPA
Trigger: CGCTGGAGGGAAGGGCCGCCACCGGAGACACCGGGC...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATGGAAGGTGCCGGCACTaGGCTCTGGGGCCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: LQCRQPGICQHLLQWLGHGRCRH*ALGPAA
Trigger: TGCGGCGGGCCCCAGAGCCCAGTGCCGGCACCTTCC...ATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTGCTCAGGTCACAGAGGCGTaGTGGGGTCACTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LPAVVGSPVGSPPLPRVAQVTEA*WGHSGL
Trigger: GAGCCCTGAGTGACCCCACCACGCCTCTGTGACCTG...AGCAACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
3UTR CAA 72 bp CGCCTCCACGGCCAGCAGGTCTCTGCCACGGGCCTCTaGTTCCCGGAGCAGCTGTACAGCAGCCCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: RLHGQQVSATGL*FPEQLYSSPKG
Trigger: GCCCTTGGGGCTGCTGTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCGTGGAGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCGGCCAGCAGGTCTCTaGCACGGGCCTCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SPQALPLLLLLHVQVGEARPAGL*HGPLVP
Trigger: GGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCG...CGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTGCGGGCGGCTCTTCCAGTGAGCAGGGCACTCAGCGTCCGCTCCCCAAGGGCTGCCTTCAGCATCTGTTaGGCTCCCCCTCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: VRAALPVSRALSVRSPRAAFSIC*APPHGQ
Trigger: CTGCCCGTGAGGGGGAGCCCAACAGATGCTGAAGGC...AGCCCTTGGGGAGCGGACGCTGAGTGCCCTGCTCACTGGAAGAGCCGCCCGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR CCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGCTCCCCTCGCCGGGTaGGCGTGCTCCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCAAPLAG*ACSILA
Trigger: GGCCAGGATGGAGCACGCCCACCCGGCGAGGGGAGC...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGCCGAGGGGTACCAGGTaGTCCTTCAGCCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQPRGTR*SFSPLA
Trigger: GGCCAGGGGGCTGAAGGACCACCTGGTACCCCTCGG...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGGAAGGTGCCGGCACTaGGCTCTGGGGCCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCAGRCRH*ALGPAA
Trigger: TGCGGCGGGCCCCAGAGCCCAGTGCCGGCACCTTCC...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGGGCCCCTCCACTGCTaGCACCGTCTGCCCGCCGTC +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCAGPLHC*HRLPAV
Trigger: GACGGCGGGCAGACGGTGCCAGCAGTGGAGGGGCCC...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GTGCGGGCGGCTCTTCCAGTGAGCAGGGCACTCAGCGTCCGCTCCCCAAGGGCTCAGGGGCCAGACACTTaGGTGCTAGTCGGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: VRAALPVSRALSVRSPRAQGPDT*VLVGVL
Trigger: AAGCACCCCGACTAGCACTCAAGTGTCTGGCCCCTG...AGCCCTTGGGGAGCGGACGCTGAGTGCCCTGCTCACTGGAAGAGCCGCCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR TCA 90 bp CCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAGTGTGGGCAGTGGAGGTGCCTaGCGAAGGTCCAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: PQCVGGGWRSPEAPAESVGSGGA*RRSSRT
Trigger: CGTCCTGCTGGACCTTCGTCAGGCACCTCCACTGCC...CACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTGCCTCGTCCACTTCCTaGTACAGTGTAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVASSTS*YSVAGP
Trigger: AGGCCCAGCTACACTGTATCAGGAAGTGGACGAGGC...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCTCATGGGTGGCGCAGCCCTaGAGCTCCCGCAGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: QVPRSSGVSSGPGGGTGSWVAQP*SSRRKC
Trigger: ACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCA...TGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTTCCCTCCAGCGCCCTTaGGGGTGGGTACCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: GTAAALAAARAGWRGAQASLQRP*GWVPSG
Trigger: TCCGGACGGTACCCACCCGCAAGGGCGCTGGAGGGA...AGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCATCCCTCTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCCCCAGGCCCTTCTGGTaGATCCACGCCCGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PSLCSAVSRGSASTFCSGPRPFW*IHARCL
Trigger: GAGACACCGGGCGTGGATGCACCAGAAGGGCCTGGG...GCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAGAGGGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGCTTGGCCCTCCAGCTTaGTGCTGGGAGTGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: HLLESPQALPLLLLLHVQLGPPA*CWEWSA
Trigger: TGCGCTCCACTCCCAGCAGCAAGCTGGAGGGCCAAG...CTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTGCGGGCGGCTCTTCCAGTGAGCAGGGCACTCAGCGTCCGCTCCCCAAGGGCTCGCTGCTCTTGCTGCTaGACGTGCAGGTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VRAALPVSRALSVRSPRARCSCC*TCRLER
Trigger: CCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCG...AGCCCTTGGGGAGCGGACGCTGAGTGCCCTGCTCACTGGAAGAGCCGCCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR GCA 90 bp CAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTGGAGCCAGGGGCCCGAGAGCCACTaGAACACCTGCTGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: QASDQHSSWGPALCFWSQGPESH*NTCWSR
Trigger: GCGACTCCAGCAGGTGTTGCAGTGGCTCTCGGGCCC...CTGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGTGCCAGCTCTTGGGGGCCTaGCCTCTGCTTCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SGGSCEAFPGHSGQQPRCQLLGA*PLLLEP
Trigger: TGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTG...GCACCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCAGCTCTTGGGGGCCTaGCCTCTGCTTCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SPQALPLLLLLHVQVGEAQLLGA*PLLLEP
Trigger: TGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTG...CGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGGTGTCCGGTGGAAGCTaGGAAGCCTTTCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPQALPLLLLLHVQVGEAVSGGS*EAFPGH
Trigger: GTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC...CGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTGTCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGAGGGAGGGGCCGGCATaGTCAAAGGATGACACGGCC +
Preference number: 4 (lower is better)
Translates to: VSGGSCEAFPGHSGQQPRREGPA*SKDDTA
Trigger: GGCCGTGTCATCCTTTGAGCATGCCGGCCCCTCCCT...CCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR GCA 90 bp TCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCCCAGGGCTCCATTATaGCCCACTGCCATCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SPQALPLLLLLHVQVGEAPRAPL*PTAIPA
Trigger: GGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGG...CGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGCCCAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGGCACAGGCTTCCTGCTaGACCTTGGCAAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SPGAPKFRRQLRPRGWHWAQASC*TLASRC
Trigger: GCACCTGCTTGCCAAGGTCCAGCAGGAAGCCTGTGC...CCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTGTCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGAGGGCTGGGAAGCCCTaGAGGTCCAGAGGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: VSGGSCEAFPGHSGQQPRRAGKP*RSRGQF
Trigger: GAACTGCCCTCTGGACCTCCAGGGCTTCCCAGCCCT...CCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAATGCCCGGTGTCTCCGGTaGCGGCCCTTCCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: PLLLLLHVQVGEAHKLVNARCLR*RPFPPA
Trigger: CGCTGGAGGGAAGGGCCGCCACCGGAGACACCGGGC...ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGCTCCAGCGGAGGTGTTaGAGTGTCAGACAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HLLESPQALPLLLLLHVQLQRRC*SVRQGA
Trigger: GGCCCCCTGTCTGACACTCCAACACCTCCGCTGGAG...CTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCCGTGTCTCGGGAGGGTaGGGGCTCCTCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGRVSGG*GLLRRA
Trigger: TGCCCTCCTGAGGAGCCCCCACCCTCCCGAGACACG...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGTGGGCCAGGCGCTCCTaGACCTCAGCGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: HLLESPQALPLLLLLHVQWARRS*TSALKA
Trigger: TGCTTTCAGCGCTGAGGTCCAGGAGCGCCTGGCCCA...CTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTGCTGCTGGGGCTGTTTCTTaGTCCTGGGGACACATCTCC +
Preference number: 4 (lower is better)
Translates to: LPAVVGSPVGSPPLPRVAAGAVS*SWGHIS
Trigger: GGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC...AGCAACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCATCCCTCTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCCTCGACTGGCCAGGGTaGGAGTGCTGCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PSLCSAVSRGSASTFCSGLDWPG*ECCSQG
Trigger: ACCCTGGGAGCAGCACTCCCACCCTGGCCAGTCGAG...GCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAGAGGGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCTCAGGCTCAAGGCAGGAATaGGTGCTGGAGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QVPRSSGVSSGPGGGTGSGSRQE*VLEAVE
Trigger: CTCCACTGCCTCCAGCACTCATTCCTGCCTTGAGCC...TGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCGGCATGCTCAAAGGATaGCACGGCCACGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGGMLKG*HGHGGP
Trigger: CGGGCCTCCGTGGCCGTGTCATCCTTTGAGCATGCC...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR GCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTTCCCCTTTTCCTTCCTaGACAGTCTCCAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVSPFPS*TVSSGG
Trigger: ACCTCCGCTGGAGACTGTGCAGGAAGGAAAAGGGGA...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTCCACGGCCAGCAGGTCTCTGCCACGGGCCTCTTGTTCCCGGAGCAGCTGTACCGTCAGCCGGGGATCTaGCAGCACCTTCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LHGQQVSATGLLFPEQLYRQPGI*QHLLQW
Trigger: CCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACG...GTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGTGCTGCCGCTGCTCTTGCTaGTGCACGTGCAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SGGSCEAFPGHSGQQPRCCRCSC*CTCRLE
Trigger: CTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCA...GCACCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCAGTCGCCGCAGGCACTaGCGCTGCTCTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGSRRRH*RCSCCC
Trigger: GCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACT...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATGCAAAGCTTGCCAGCTaGTCCTCCCCTGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LQCRQPGICQHLLQWLGHAKLAS*SSPGPE
Trigger: CTCGGGCCCAGGGGAGGAGCAGCTGGCAAGCTTTGC...ATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGTGCCGCAGCTCTGTCTCCTaGAGGGCAGACAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SGGSCEAFPGHSGQQPRCRSSVS*RADKVS
Trigger: GGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCG...GCACCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGACCCGGCCCAGCTCCTaGCAGCCGAGCAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERTRPSS*QPSKAL
Trigger: GAGGGCTTTGCTCGGCTGGCAGGAGCTGGGCCGGGT...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTGACCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTAGCTGTTCCAGAGGCTaGTGCAGGGCTCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VTSRPRISTALGGLPSASSCSRG*CRARGR
Trigger: CCTGCCCCGAGCCCTGCAGCAGCCTCTGGAACAGCT...AGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGCCTGCAGAGTGTATaGCTCTCGTGCACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQCLQSV*LSCTPP
Trigger: CGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCA...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGCCCAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGGACTCTGGAGAGGCCTaGGGAGCCTTCAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: SPGAPKFRRQLRPRGWHWDSGEA*GAFSIC
Trigger: ACAGATGCTGAAGGCTCCCCAGGCCTCTCCAGAGTC...CCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTCGTCCACTTCCTGATACAGTGTAGCTGGGCCTTGGCCCTCCAGCTTGCTGCTGCTCCCCTCGCCGGGTaGGCGTGCTCCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LVHFLIQCSWALALQLAAAPLAG*ACSILA
Trigger: GGCCAGGATGGAGCACGCCCACCCGGCGAGGGGAGC...AGCAGCAAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAGGAAGTGGACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGGCTCCCCTCGCCGGGTaGGCGTGCTCCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQAPLAG*ACSILA
Trigger: GGCCAGGATGGAGCACGCCCACCCGGCGAGGGGAGC...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATGACAGCCTCAGCTCCTaGGGGAGACTCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LQCRQPGICQHLLQWLGHDSLSS*GRLRGG
Trigger: GCCTCCCCTGAGTCTCCCCCAGGAGCTGAGGCTGTC...ATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGCTCCAGCGGAGGTGTTaGAGTGTCAGACAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQLQRRC*SVRQGA
Trigger: GGCCCCCTGTCTGACACTCCAACACCTCCGCTGGAG...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTCGTGTCTCGGGAGGGTaGGGGCTCCTCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCARVSGG*GLLRRA
Trigger: TGCCCTCCTGAGGAGCCCCCACCCTCCCGAGACACG...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAGAGTGCTGGAGGCAGTaGAGGTGCCTGACGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SRPQCVGGGWRSPEAPAEECWRQ*RCLTKV
Trigger: GACCTTCGTCAGGCACCTCCACTGCCTCCAGCACTC...TTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTTCTTGGCAGCGGGCCTaGCAGCGGCCCCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCASWQRA*QRPHSR
Trigger: GCGAGAATGGGGCCGCTGCCAGGCCCGCTGCCAAGA...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCTCGTCGGTAGCCCCGTaGGCTCGCCTCCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: CLSCTPPPKPQLKAESAVSSVAP*ARLLSH
Trigger: GTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGA...GACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTTCGTCGGTAGCCCCGTaGGCTCGCCTCCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCASSVAP*ARLLSH
Trigger: GTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGA...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCTCAGATCAGCACAGCTCTTaGGGGCCTGCCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QVPRSSGVSSGPGGGTGSDQHSS*GPALCF
Trigger: GAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATC...TGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCCCCAGGGGGTGGCACTaGCTCACTCAAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGPRGWH*LTQGGH
Trigger: GTGGCCACCTTGAGTGAGCCAGTGCCACCCCCTGGG...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGCTAAGATCCCTCGACTaGCCAGGGTGGGAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HLLESPQALPLLLLLHVQLRSLD*PGWECC
Trigger: GCAGCACTCCCACCCTGGCCAGTCGAGGGATCTTAG...CTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCGGGTGCTTGGGCAGCTaGGGGCACCACCTGCAGATA +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGGCLGS*GHHLQI
Trigger: TATCTGCAGGTGGTGCCCTCAGCTGCCCAAGCACCC...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCGGAGAGGGGTCCCTGTaGCCTCCTAACTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGGEGSL*PPNSHC
Trigger: GCAGTGGGAGTTAGGAGGTCACAGGGACCCCTCTCC...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GTGTCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGGCCTCGTCCACTTCCTaGTACAGTGTAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VSGGSCEAFPGHSGQQPRASSTS*YSVAGP
Trigger: AGGCCCAGCTACACTGTATCAGGAAGTGGACGAGGC...CCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp TGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGGCACTCAGAACTaGGCTCAGGCCCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: CLSCTPPPKPQLKAESAVPGTQN*AQAQLP
Trigger: GGGAAGCTGGGCCTGAGCTCAGTTCTGAGTGCCGGG...GACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp TCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCAGCCCAAAGTGTGCTaGGAGGAGAAGCTGCACGCA +
Preference number: 4 (lower is better)
Translates to: SPQALPLLLLLHVQVGEAQPKVC*EEKLHA
Trigger: TGCGTGCAGCTTCTCCTCTCAGCACACTTTGGGCTG...CGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCATCCCTCTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCGCCTGTGTGTCTTGGTaGGGGCAGATTGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PSLCSAVSRGSASTFCSGACVSW*GQIAKG
Trigger: GCCCTTGGCAATCTGCCCTCACCAAGACACACAGGC...GCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAGAGGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS-3UTR GCA 90 bp GCAGTGTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTCTCGCCGGGTGGGCGTaGTCCATCCTGGCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: AVWEKELQRVCGTSGSHCLAGWA*SILAPR
Trigger: CCTCGGGGCCAGGATGGAGCACGCCCACCCGGCGAG...ACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCACACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp GTGACCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTCGTCAGCCGGGGATCTaGCAGCACCTTCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VTSRPRISTALGGLPSASRQPGI*QHLLQW
Trigger: CCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACG...AGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAATCTTGCTGCTGCACGTaGAGGTTGGAGAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: SRPQCVGGGWRSPEAPAESCCCT*RLERRT
Trigger: TGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGA...TTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTAGCCACTGCAACACCTaGTGGAGTCGCCGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GTAAALAAARAGWRGAQASHCNT*WSRRRH
Trigger: GTGCCTGCGGCGACTCCAGCAGGTGTTGCAGTGGCT...AGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTGCCTGGGCCCGAGAGCCACTaGAACACCTGCTGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: SAGDLPAPSAVAWAFPLPGPESH*NTCWSR
Trigger: GCGACTCCAGCAGGTGTTGCAGTGGCTCTCGGGCCC...AGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCGCAAAGCTTGCCAGCTaGTCCTCCCCTGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: CLSCTPPPKPQLKAESAVAKLAS*SSPGPE
Trigger: CTCGGGCCCAGGGGAGGAGCAGCTGGCAAGCTTTGC...GACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAGGCATAGCAAAGCTTaGCAGCTGCTCCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SRPQCVGGGWRSPEAPAERHSKA*QLLLPW
Trigger: CCAGGGGAGGAGCAGCTGGCAAGCTTTGCTATGCCT...TTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGCATCTCCTGGAAGGTaGCGGCACTGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCAASPGR*RHWALG
Trigger: CCCCAGAGCCCAGTGCCGGCACCTTCCAGGAGATGC...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTGCCTTGGGGGCCTGCCCTCTaGTTCTGGAGCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SAGDLPAPSAVAWAFPLPWGPAL*FWSQLR
Trigger: CCTGAGCTGGCTCCAGAAGCAGAGGGCAGGCCCCCA...AGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTTCTGGTGAGGTTGCCTaGAGAGTGTATGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVSGEVA*RVYASR
Trigger: ACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGGGCTGCTCTGACTCCTaGAGGAGAAGGCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: SPQALPLLLLLHVQVGEAGCSDS*RRRHQA
Trigger: AGCTTGGTGCCTTCTCCTGCAGGAGTCAGAGCAGCC...CGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACGCCCGGTGTCTCCGGTaGCGGCCCTTCCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHARCLR*RPFPPA
Trigger: CGCTGGAGGGAAGGGCCGCCACCGGAGACACCGGGC...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGGGCCCCAGGCCCTTCTaGTGCATCCACGCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEGPRPF*CIHARC
Trigger: ACACCGGGCGTGGATGCACCAGAAGGGCCTGGGGCC...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GAGCAGGGCACTCAGCGTCCGCTCCCCAAGGGCTTTGATGTCCAGGAAGGGTTTGGCCCCAGGCCCTTCTaGTGCATCCACGCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: EQGTQRPLPKGFDVQEGFGPRPF*CIHARC
Trigger: ACACCGGGCGTGGATGCACCAGAAGGGCCTGGGGCC...AAACCCTTCCTGGACATCAAAGCCCTTGGGGAGCGGACGCTGAGTGCCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAATCGTGTCTCGGGAGGGTaGGGGCTCCTCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLLLLLHVQVGEAHKLVNRVSGG*GLLRRA
Trigger: TGCCCTCCTGAGGAGCCCCCACCCTCCCGAGACACG...ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGGCTTGCTGCTGGGAGTaGAGCGCAGCCTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQACCWE*SAASSG
Trigger: TCCTGATGAGGCTGCGCTCCACTCCCAGCAGCAAGC...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTGGAGCCAGGCTTGCTGCTGGGAGTaGAGCGCAGCCTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: QASDQHSSWGPALCFWSQACCWE*SAASSG
Trigger: TCCTGATGAGGCTGCGCTCCACTCCCAGCAGCAAGC...CTGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCAGGGCCTCCCGTGCCTaGGCCAGGCGCTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCRASRA*ARRSWT
Trigger: GGTCCAGGAGCGCCTGGCCCAGGCACGGGAGGCCCT...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGAGCCGCAGGGCCCGATaGAGGCCACTCTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERSRRAR*RPLSTC
Trigger: GCAGGTTGAGAGTGGCCTCCATCGGGCCCTGCGGCT...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGCCTCAGGCCCAGGGGGTaGCACTGGCTCACTCAAGGT +
Preference number: 4 (lower is better)
Translates to: GPAARVPVVSTSCLPPQCLRPRG*HWLTQG
Trigger: ACCTTGAGTGAGCCAGTGCCACCCCCTGGGCCTGAG...GCACTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGAAGGGCCAGCCTCCATaGAGCCCTTGCTTAAGGGAC +
Preference number: 4 (lower is better)
Translates to: HLLESPQALPLLLLLHVQKGQPP*SPCLRD
Trigger: GTCCCTTAAGCAAGGGCTCCATGGAGGCTGGCCCTT...CTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCTCAGCTGGGGCTGTTTCTTaGTCCTGGGGACACATCTCC +
Preference number: 4 (lower is better)
Translates to: QVPRSSGVSSGPGGGTGSAGAVS*SWGHIS
Trigger: GGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC...TGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCTCGACTGGCCAGGGTaGGAGTGCTGCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SGEVACRVYASRARRRRNLDWPG*ECCSQG
Trigger: ACCCTGGGAGCAGCACTCCCACCCTGGCCAGTCGAG...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAGTGTGCCCCTCCCGTCAGGATaGGGAATCCAGATGCCATCA +
Preference number: 4 (lower is better)
Translates to: PQCVGGGWRSPEAPAESVPLPSG*GIQMPS
Trigger: TGATGGCATCTGGATTCCTCATCCTGACGGGAGGGG...CACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR TCA 90 bp AGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAGAATCAGCAGCCGCTaGACAAGGGGAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: SRPQCVGGGWRSPEAPAERISSR*TRGGSP
Trigger: AGGAGATCCTCCCCTTGTTCAGCGGCTGCTGATTCT...TTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGAGAATCAGCAGCCGCTaGACAAGGGGAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: HLLESPQALPLLLLLHVQRISSR*TRGGSP
Trigger: AGGAGATCCTCCCCTTGTTCAGCGGCTGCTGATTCT...CTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCAGGCGCACAAGCTGGTaGATGGCCTCGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGRRTSW*MASSTS
Trigger: GGAAGTGGACGAGGCCATTCACCAGCTTGTGCGCCT...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GAGCAGGGCACTCAGCGTCCGCTCCCCAAGGGCTTTGATGTCCAGGAAGGGTTTGCCGCTGCTGGGCACTaGTGCTTCGCTTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: EQGTQRPLPKGFDVQEGFAAAGH*CFACAP
Trigger: TGGAGCGCAAGCGAAGCATCAGTGCCCAGCAGCGGC...AAACCCTTCCTGGACATCAAAGCCCTTGGGGAGCGGACGCTGAGTGCCCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CAGGCTCCCGGCGAAAGGCCGGGAAGGGAGGGGCCGGCATGCTCAAAGGATGACCCTTGCTTAAGGGACTaGGCGCAGCCAGACCATTCT +
Preference number: 4 (lower is better)
Translates to: QAPGERPGREGPACSKDDPCLRD*AQPDHS
Trigger: AGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGG...GTCATCCTTTGAGCATGCCGGCCCCTCCCTTCCCGGCCTTTCGCCGGGAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR TCA 90 bp GTGCGGGCGGCTCTTCCAGTGAGCAGGGCACTCAGCGTCCGCTCCCCAAGGGCTGCTCCCCAAGGGCTTTaGTGTCCAGGAAGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: VRAALPVSRALSVRSPRAAPQGL*CPGRVY
Trigger: ATAAACCCTTCCTGGACATCAAAGCCCTTGGGGAGC...AGCCCTTGGGGAGCGGACGCTGAGTGCCCTGCTCACTGGAAGAGCCGCCCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR TCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGGCAATGTGGCTGCTCTaGCTCCTGCAGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQAMWLL*LLQEKA
Trigger: TGCCTTCTCCTGCAGGAGTCAGAGCAGCCACATTGC...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCATCCCTCTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCGCAATGTGGCTGCTCTaGCTCCTGCAGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PSLCSAVSRGSASTFCSGAMWLL*LLQEKA
Trigger: TGCCTTCTCCTGCAGGAGTCAGAGCAGCCACATTGC...GCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAGAGGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCATCCCTCTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCCAGGGTGGGGGCTGTTaGCTCAAAGGGTGGATACAG +
Preference number: 4 (lower is better)
Translates to: PSLCSAVSRGSASTFCSGQGGGC*LKGWIQ
Trigger: CTGTATCCACCCTTTGAGGCAACAGCCCCCACCCTG...GCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAGAGGGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTCCACGGCCAGCAGGTCTCTGCCACGGGCCTCTTGTTCCCGGAGCAGCTGTACGGTAGGGCTGCTAGCTaGACCACCACCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: LHGQQVSATGLLFPEQLYGRAAS*TTTCSC
Trigger: GCATGAACAGGTGGTGGTGCAGCTAGCAGCCCTACC...GTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCAGTGTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTGGCACAGGAACCTCCTaGACCCGCCCACCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AVWEKELQRVCGTSGSHCGTGTS*TRPPPG
Trigger: CCCTGGGGGTGGGCGGGTGCAGGAGGTTCCTGTGCC...ACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCACACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp TCGGTGCTTCACGTACTGTGCATAAAGGCTGAACTGGTCCCCGTGGCGAAGGAACTCGCCGGGTGGGCGTaGTCCATCCTGGCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: SVLHVLCIKAELVPVAKELAGWA*SILAPR
Trigger: CCTCGGGGCCAGGATGGAGCACGCCCACCCGGCGAG...TTCCTTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGTACGTGAAGCACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGCCACCTCCAAGACTGCTaGCTCTGGGACAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GPAARVPVVSTSCLPPQCHLQDC*LWDSLS
Trigger: GCTGAGGCTGTCCCAGAGGCAGCAGTCTTGGAGGTG...GCACTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTGGAGCCAGAGACACCTCCAAGACTaGTGCCTCTGGGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: QASDQHSSWGPALCFWSQRHLQD*CLWDSL
Trigger: GAGGCTGTCCCAGAGGCAGCAGTCTTGGAGGTGTCT...CTGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTCATTCTGGAAGCTTGTaGTCACTTGGTGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVHSGSL*SLGEGR
Trigger: TCTGCCCTCACCAAGTGAGCACAAGCTTCCAGAATG...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR GCA 90 bp GGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGCCCTCCTAACTCCCACTaGAGCTCCTCTGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GPAARVPVVSTSCLPPQCPPNSH*SSSGLA
Trigger: GGCCAAGCCAGAGGAGCTGCAGTGGGAGTTAGGAGG...GCACTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAAGAAGGGCCCTCCAGCTTGCTaGTGGGAGTGGAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PASRAKPSSTHSCACWKKGPPAC*WEWSAA
Trigger: GGCTGCGCTCCACTCCCAGCAGCAAGCTGGAGGGCC...CTTCTTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATCACTGCCGCTGCTCTTaGTGCTGCACGTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LQCRQPGICQHLLQWLGHHCRCS*CCTCRL
Trigger: CAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTG...ATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGTCCCCAGGCATACGCAGGCACTGCCGCTaGTCTTGCTGCTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: ARNRSSVSCRADKVSPGIRRHCR*SCCCTC
Trigger: GCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCG...TATGCCTGGGGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCAAAGCTTGCCAGCTaGTCCTCCCCTGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCAKLAS*SSPGPE
Trigger: CTCGGGCCCAGGGGAGGAGCAGCTGGCAAGCTTTGC...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAACCCGGCCCAGCTCCTaGCAGCCGAGCAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LQSVCLSCTPPPKPQLKATRPSS*QPSKAL
Trigger: GAGGGCTTTGCTCGGCTGGCAGGAGCTGGGCCGGGT...TGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGCTCCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAAACCCGGCCCAGCTCCTaGCAGCCGAGCAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSCQPSKALIHPFMCLLETRPSS*QPSKAL
Trigger: GAGGGCTTTGCTCGGCTGGCAGGAGCTGGGCCGGGT...TTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGCCATTCTCGCAGGGCTaGTGGGCTGCCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEPFSQG*WAAQVQ
Trigger: CTGGACCTGGGCAGCCCAGCAGCCCTGCGAGAATGG...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAAGCAGGTGCTTGGCTaGTACCAGGAAGTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: SRPQCVGGGWRSPEAPAEKQVLG*YQEVQR
Trigger: ACGCTGGACTTCCTGGTACCAGCCAAGCACCTGCTT...TTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAGTGTGACTGAGGCGACCTGTTaGCCGGTCCTTGTTGATGCC +
Preference number: 4 (lower is better)
Translates to: PQCVGGGWRSPEAPAESVTEATC*PVLVDA
Trigger: GGCATCAACAAGGACCGGCCAACAGGTCGCCTCAGT...CACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTGCCTAGGGCTGGGAAGCCCTaGAGGTCCAGAGGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SAGDLPAPSAVAWAFPLPRAGKP*RSRGQF
Trigger: GAACTGCCCTCTGGACCTCCAGGGCTTCCCAGCCCT...AGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGCCTTCAGCATCTGTTaGGCTCCCCCTCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCAAFSIC*APPHGQ
Trigger: CTGCCCGTGAGGGGGAGCCCAACAGATGCTGAAGGC...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTGACCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTCTCAGGAGGGCACGGTaGGGTAATGGTCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VTSRPRISTALGGLPSASLRRAR*GNGQQS
Trigger: GCTCTGCTGACCATTACCCCACCGTGCCCTCCTGAG...AGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGCCTCCAGCTTGCTGCTaGGAGTGGAGCGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERPPACC*EWSAAS
Trigger: TGAGGCTGCGCTCCACTCCCAGCAGCAAGCTGGAGG...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACTGCAACACCTGCTaGAGTCGCCGCAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SGEVACRVYASRARRRRNHCNTC*SRRRHC
Trigger: GCAGTGCCTGCGGCGACTCCAGCAGGTGTTGCAGTG...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCATCTTGGCAGCGGGCCTaGCAGCGGCCCCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: LQSVCLSCTPPPKPQLKASWQRA*QRPHSR
Trigger: GCGAGAATGGGGCCGCTGCCAGGCCCGCTGCCAAGA...TGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCGATCAGCACAGCTCTTaGGGGCCTGCCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGDQHSS*GPALCF
Trigger: GAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATC...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTGCTCTGGCTCACTCAAGGTaGCCACGTAATCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LPAVVGSPVGSPPLPRVALAHSR*PRNLVH
Trigger: GTGAACAAGATTACGTGGCCACCTTGAGTGAGCCAG...AGCAACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCATCCCTCTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCAAGGGCCAGCCTCCATaGAGCCCTTGCTTAAGGGAC +
Preference number: 4 (lower is better)
Translates to: PSLCSAVSRGSASTFCSGKGQPP*SPCLRD
Trigger: GTCCCTTAAGCAAGGGCTCCATGGAGGCTGGCCCTT...GCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAGAGGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGGTCACAGAGGCGTGGTaGGGTCACTCAGGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERVTEAW*GHSGLE
Trigger: CTCGAGCCCTGAGTGACCCCACCACGCCTCTGTGAC...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACGTCACAGAGGCGTGGTaGGGTCACTCAGGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: SGEVACRVYASRARRRRNVTEAW*GHSGLE
Trigger: CTCGAGCCCTGAGTGACCCCACCACGCCTCTGTGAC...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGCCCAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGGCTGCACGCAAGTTCTaGATCTTCTCCAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: SPGAPKFRRQLRPRGWHWAARKF*IFSRSQ
Trigger: CTGTGACCTGGAGAAGATCCAGAACTTGCGTGCAGC...CCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCATCCCTCTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTACAGTGGCCCAGGATaGGAAAGCACCGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PSLCSAVSRGSASTFCSGYSGPG*ESTGRG
Trigger: CCCTCTTCCGGTGCTTTCCCATCCTGGGCCACTGTA...GCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAGAGGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTTGGCCGGTCCTTGTTaGTGCCTTGTAGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQLAGPC*CLVATQ
Trigger: CTGAGTGGCTACAAGGCATCAACAAGGACCGGCCAA...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp AGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAGCTGATGTCCAACCATaGGGCCCTCTTTGTGCACAA +
Preference number: 4 (lower is better)
Translates to: SRPQCVGGGWRSPEAPAEADVQP*GPLCAQ
Trigger: TTGTGCACAAAGAGGGCCTCATGGTTGGACATCAGC...TTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGCAGTGTACTTGGCTaGTGTCCAACCATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GTAAALAAARAGWRGAQAGSVLG*CPTMRP
Trigger: GGGCCTCATGGTTGGACATCAGCCAAGTACACTGCC...AGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCGGCAGTGGAGGTGCCTaGCGAAGGTCCAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: ECMPLVHAAAETTTQSRVGSGGA*RRSSRT
Trigger: CGTCCTGCTGGACCTTCGTCAGGCACCTCCACTGCC...GACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTGTATCTCTACCCAGTaGCTGGGAGAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LQCRQPGICQHLLQWLGHCISTQ*LGEGSL
Trigger: CAGGGACCCCTCTCCCAGTCACTGGGTAGAGATACA...ATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCCTGGACCTCAGCGCTaGAAGCACGGAATCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGEVACRVYASRARRRRNPGPQR*KHGIAA
Trigger: AGCTGCGATTCCGTGCTTTCAGCGCTGAGGTCCAGG...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGCACGTGTTCCCGTGGTaGGCACGTCCTGTCTACCAC +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERHVFPW*ARPVYH
Trigger: GTGGTAGACAGGACGTGCTCACCACGGGAACACGTG...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGCCGCTGCTGGGCACTaGTGCTTCGCTTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LSAESTESQLCLLQGRQGAAAGH*CFACAP
Trigger: TGGAGCGCAAGCGAAGCATCAGTGCCCAGCAGCGGC...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGCCTTGCTTAAGGGACTaGGCGCAGCCAGACCATTCT +
Preference number: 4 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQPCLRD*AQPDHS
Trigger: AGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGG...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCGGCACTCAGAACTaGGCTCAGGCCCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQPGTQN*AQAQLP
Trigger: GGGAAGCTGGGCCTGAGCTCAGTTCTGAGTGCCGGG...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTCCCCTTTTCCTTCCTaGACAGTCTCCAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQSPFPS*TVSSGG
Trigger: ACCTCCGCTGGAGACTGTGCAGGAAGGAAAAGGGGA...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAAGAAGCCCATCCCTCTGCAGTaGCGTCAGCCGGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: PASRAKPSSTHSCACWKKPIPLQ*RQPGIC
Trigger: GCAGATCCCCGGCTGACGGCACTGCAGAGGGATGGG...CTTCTTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGACCCATTCATGTGCCTaGTGGAAGAAGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: HLLESPQALPLLLLLHVQTHSCA*WKKRCS
Trigger: GCTACAGCGCTTCTTCCAGCAGGCACATGAATGGGT...CTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGATCCACCCATTCATGTaGCTGCTGGAAGAAGCGCTG +
Preference number: 4 (lower is better)
Translates to: HLLESPQALPLLLLLHVQIHPFM*LLEEAL
Trigger: CAGCGCTTCTTCCAGCAGGCACATGAATGGGTGGAT...CTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCAGTGTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTACTGCTGGCACCGTCTaGCCGCCGTCGTCGGTAGCC +
Preference number: 4 (lower is better)
Translates to: AVWEKELQRVCGTSGSHCTAGTV*PPSSVA
Trigger: GGCTACCGACGACGGCGGGCAGACGGTGCCAGCAGT...ACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCACACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTTCAGACACCAGCCGCTaGTGGGCACTGATGCTTCGC +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCASDTSR*WALMLR
Trigger: GCGAAGCATCAGTGCCCAGCAGCGGCTGGTGTCTGA...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCTCAGACACCAGCCGCTaGTGGGCACTGATGCTTCGC +
Preference number: 4 (lower is better)
Translates to: CLSCTPPPKPQLKAESAVSDTSR*WALMLR
Trigger: GCGAAGCATCAGTGCCCAGCAGCGGCTGGTGTCTGA...GACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTCGTCCACTTCCTGATACAGTGTAGCTGGGCCTTGGCCCTCCAGCTTGCTGCTAGCTGTTCCAGAGGCTaGTGCAGGGCTCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LVHFLIQCSWALALQLAASCSRG*CRARGR
Trigger: CCTGCCCCGAGCCCTGCAGCAGCCTCTGGAACAGCT...AGCAGCAAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAGGAAGTGGACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCACGGCCAGCAGGTCTCTaGCACGGGCCTCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LQSVCLSCTPPPKPQLKARPAGL*HGPLVP
Trigger: GGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCG...TGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTGCTCTGAACAGGAGGAGATaGTCGAAGAGAAAGACATGG +
Preference number: 4 (lower is better)
Translates to: LPAVVGSPVGSPPLPRVALNRRR*SKRKTW
Trigger: CCATGTCTTTCTCTTCGAGCATCTCCTCCTGTTCAG...AGCAACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCAGTGTATGCCTCTCGTaGACGCCGCCGCCGAAACCA +
Preference number: 4 (lower is better)
Translates to: CLSCTPPPKPQLKAESAVSVCLS*TPPPKP
Trigger: TGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACT...GACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCTCATCTGGTGAGGTTGCCTaGAGAGTGTATGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: QVPRSSGVSSGPGGGTGSSGEVA*RVYASR
Trigger: ACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA...TGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCCTCCTTGTTGTGGGCTaGCTGTCTCCACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGLLVVG*LSPQQL
Trigger: CAGCTGCTGTGGAGACAGGCAGCCCACAACAAGGAG...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTGTCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGATGGACACCATCTGCTaGACTCGGAGCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VSGGSCEAFPGHSGQQPRMDTIC*TRSSLL
Trigger: CAACAAGGAGCTCCGAGTGCAGCAGATGGTGTCCAT...CCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTGACCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTCCCATGGACACCATCTaGTGCACTCGGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: VTSRPRISTALGGLPSASPMDTI*CTRSSL
Trigger: CAAGGAGCTCCGAGTGCAGCAGATGGTGTCCATGGG...AGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTCCCATGGACACCATCTaGTGCACTCGGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AVSRGSASTFCSGLGIPTPMDTI*CTRSSL
Trigger: CAAGGAGCTCCGAGTGCAGCAGATGGTGTCCATGGG...AGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGCTGGCTCAGGCTCCATaGCTCGGCGCCGGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQLAQAP*LGAGPR
Trigger: ACGCGGCCCGGCGCCGAGCCATGGAGCCTGAGCCAG...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGGCTAGTCGGGGTGCTTaGGCAGCTGAGGGCACCACC +
Preference number: 4 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQASRGA*AAEGTT
Trigger: GGTGGTGCCCTCAGCTGCCCAAGCACCCCGACTAGC...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGTGCTGGGGGCAGTGTACTTaGCTGATGTCCAACCATGAG +
Preference number: 4 (lower is better)
Translates to: SGGSCEAFPGHSGQQPRCWGQCT*LMSNHE
Trigger: CTCATGGTTGGACATCAGCCAAGTACACTGCCCCCA...GCACCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGGTACCGTCCGGACTCTaGAGAGGCCTGGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEVPSGL*RGLGSL
Trigger: AAGGCTCCCCAGGCCTCTCCAGAGTCCGGACGGTAC...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGTTGCCAAGGGCTTCTTaGTGGCTGGCATCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: HLLESPQALPLLLLLHVQLPRAS*WLASSL
Trigger: CAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAA...CTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTCTCCAGCGGAGGTGTTaGAGTGTCAGACAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCLQRRC*SVRQGA
Trigger: GGCCCCCTGTCTGACACTCCAACACCTCCGCTGGAG...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCGGCAGGAATGAGTGCTaGAGGCAGTGGAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: CLSCTPPPKPQLKAESAVGRNEC*RQWRCL
Trigger: CAGGCACCTCCACTGCCTCCAGCACTCATTCCTGCC...GACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGAGCCCAGCACACCTTaGCACAGGCGACATAGCCTT +
Preference number: 4 (lower is better)
Translates to: GTAAALAAARAGWRGAQAEPSTP*HRRHSL
Trigger: AAGGCTATGTCGCCTGTGCCAAGGTGTGCTGGGCTC...AGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAATTGGGCCAGGCGCTCCTaGACCTCAGCGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PLLLLLHVQVGEAHKLVNWARRS*TSALKA
Trigger: TGCTTTCAGCGCTGAGGTCCAGGAGCGCCTGGCCCA...ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGAGGGCCTCCCGTGCCTaGGCCAGGCGCTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWRASRA*ARRSWT
Trigger: GGTCCAGGAGCGCCTGGCCCAGGCACGGGAGGCCCT...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GACCTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAAGCCGCAGGGCCCGATaGAGGCCACTCTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: DLSAESTESQLCLLQGRQSRRAR*RPLSTC
Trigger: GCAGGTTGAGAGTGGCCTCCATCGGGCCCTGCGGCT...TTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTGGAAGGTGCCGGCACTaGGCTCTGGGGCCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSGRCRH*ALGPAA
Trigger: TGCGGCGGGCCCCAGAGCCCAGTGCCGGCACCTTCC...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTCGTCGGTAGCCCCGTaGGCTCGCCTCCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHSSVAP*ARLLSH
Trigger: GTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGA...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACCAGGGAGCAATGGGATaGGGCTGGCCGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHQGAMG*GWPWPR
Trigger: CCTGGGCCACGGCCAGCCCCATCCCATTGCTCCCTG...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTGCCTGACACCAGCCGCTGCTaGGCACTGATGCTTCGCTTG +
Preference number: 4 (lower is better)
Translates to: SAGDLPAPSAVAWAFPLPDTSRC*ALMLRL
Trigger: CAAGCGAAGCATCAGTGCCCAGCAGCGGCTGGTGTC...AGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCTCAAGAAAGTGTGTCCGGTaGAAGCTGCGAAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QVPRSSGVSSGPGGGTGSRKCVR*KLRSLS
Trigger: GGAAAGGCTTCGCAGCTTCCACCGGACACACTTTCT...TGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGAGAAAGTGTGTCCGGTaGAAGCTGCGAAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SPQALPLLLLLHVQVGEARKCVR*KLRSLS
Trigger: GGAAAGGCTTCGCAGCTTCCACCGGACACACTTTCT...CGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTGCCTCGGAGCTCCTTGTTGTaGGCTGCCTGTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SAGDLPAPSAVAWAFPLPRSSLL*AACLHS
Trigger: GCTGTGGAGACAGGCAGCCCACAACAAGGAGCTCCG...AGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTACAGTGGCCCAGGATaGGAAAGCACCGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LQCRQPGICQHLLQWLGHYSGPG*ESTGRG
Trigger: CCCTCTTCCGGTGCTTTCCCATCCTGGGCCACTGTA...ATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGCCAGGGAGGGCTaGCATGGGAGTGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCAAREG*HGSDVL
Trigger: CAGGACATCACTCCCATGCCAGCCCTCCCTGGCAGC...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACAGAGCTCGCCCACTCTaGTCCACCCCTCCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: SGEVACRVYASRARRRRNRARPL*STPPED
Trigger: GTCTTCAGGAGGGGTGGACCAGAGTGGGCGAGCTCT...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS-3UTR TCA 90 bp CCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAGTGTGGTAGCCACTCAGGTGTaGATAGGTAGGCACAAGCCT +
Preference number: 4 (lower is better)
Translates to: PQCVGGGWRSPEAPAESVVATQV*IGRHKP
Trigger: AGGCTTGTGCCTACCTATTCACACCTGAGTGGCTAC...CACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCTTGGCCGGTCCTTGTTaGTGCCTTGTAGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGLAGPC*CLVATQ
Trigger: CTGAGTGGCTACAAGGCATCAACAAGGACCGGCCAA...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTACAGTAGGCAGGTACTaGGGCGACCTGTTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCTVGRY*GDLLAG
Trigger: ACCGGCCAACAGGTCGCCTCAGTACCTGCCTACTGT...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGGCAGTGTACTTGGCTaGTGTCCAACCATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCAGSVLG*CPTMRP
Trigger: GGGCCTCATGGTTGGACATCAGCCAAGTACACTGCC...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCGGCAGTGGAGGTGCCTaGCGAAGGTCCAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCGSGGA*RRSSRT
Trigger: CGTCCTGCTGGACCTTCGTCAGGCACCTCCACTGCC...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp AGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAATTTCAGATCATTCTCTaGCAGCACCTCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: SRPQCVGGGWRSPEAPAEFQIIL*QHLSTL
Trigger: CAGGGTGCTGAGGTGCTGTCAGAGAATGATCTGAAA...TTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTAGGCGCACAAGCTGGTaGATGGCCTCGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCRRTSW*MASSTS
Trigger: GGAAGTGGACGAGGCCATTCACCAGCTTGTGCGCCT...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGGCAATGTGGCTGCTCTaGCTCCTGCAGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERAMWLL*LLQEKA
Trigger: TGCCTTCTCCTGCAGGAGTCAGAGCAGCCACATTGC...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGCCCACCTCCAGGGTATaGAGGCAAGCAATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERPTSRV*RQAMWL
Trigger: CAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGG...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGCGGCGAGAGTGCTCTaGACACAGTCCTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LSAESTESQLCLLQGRQGAARVL*TQSSTG
Trigger: GCCAGTGGAGGACTGTGTGCAGAGCACTCTCGCCGC...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCACCTTGGCAAGCAGGTaGTTGGCTGGTACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGTLASR*LAGTRK
Trigger: CTTCCTGGTACCAGCCAAGCACCTGCTTGCCAAGGT...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTACCTTGGCAAGCAGGTaGTTGGCTGGTACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AVSRGSASTFCSGLGIPTTLASR*LAGTRK
Trigger: CTTCCTGGTACCAGCCAAGCACCTGCTTGCCAAGGT...AGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTGCCTGGTAGGGCTGCTAGCTaGACCACCACCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: SAGDLPAPSAVAWAFPLPGRAAS*TTTCSC
Trigger: GCATGAACAGGTGGTGGTGCAGCTAGCAGCCCTACC...AGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTCTCGCCGGGTGGGCGTaGTCCATCCTGGCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCLAGWA*SILAPR
Trigger: CCTCGGGGCCAGGATGGAGCACGCCCACCCGGCGAG...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGCCTCCTAACTCCCACTaGAGCTCCTCTGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEPPNSH*SSSGLA
Trigger: GGCCAAGCCAGAGGAGCTGCAGTGGGAGTTAGGAGG...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACCCCATCCCTCTGCAGTaGCGTCAGCCGGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHPIPLQ*RQPGIC
Trigger: GCAGATCCCCGGCTGACGGCACTGCAGAGGGATGGG...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGGGCCCTCCAGCTTGCTaGTGGGAGTGGAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQGPPAC*WEWSAA
Trigger: GGCTGCGCTCCACTCCCAGCAGCAAGCTGGAGGGCC...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACTCTTGCTGCTGCACGTaGAGGTTGGAGAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: SGEVACRVYASRARRRRNSCCCT*RLERRT
Trigger: TGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGA...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTGGAGCCAGATCCACCCATTCATGTaGCTGCTGGAAGAAGCGCTG +
Preference number: 4 (lower is better)
Translates to: QASDQHSSWGPALCFWSQIHPFM*LLEEAL
Trigger: CAGCGCTTCTTCCAGCAGGCACATGAATGGGTGGAT...CTGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGACTGGGCCCCTCCACTaGTGGCACCGTCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWTGPLH*WHRLPA
Trigger: GGCGGGCAGACGGTGCCAGCAGTGGAGGGGCCCAGT...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTGCCGTGGCCCAGGGCTaGTGGGGAGCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSAVAQG*WGAARS
Trigger: GCTCCTTGCTGCTCCCCAGCAGCCCTGGGCCACGGC...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCAGTGTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTAGCTGTTCCAGAGGCTaGTGCAGGGCTCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AVWEKELQRVCGTSGSHCSCSRG*CRARGR
Trigger: CCTGCCCCGAGCCCTGCAGCAGCCTCTGGAACAGCT...ACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACCGGCCAGCAGGTCTCTaGCACGGGCCTCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHRPAGL*HGPLVP
Trigger: GGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCG...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCATCCCTCTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCATGGACACCATCTGCTaGACTCGGAGCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: PSLCSAVSRGSASTFCSGMDTIC*TRSSLL
Trigger: CAACAAGGAGCTCCGAGTGCAGCAGATGGTGTCCAT...GCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAGAGGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAGGGCTCCATTATaGCCCACTGCCATCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQPRAPL*PTAIPA
Trigger: GGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGG...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGGCACAGGCTTCCTGCTaGACCTTGGCAAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEAQASC*TLASRC
Trigger: GCACCTGCTTGCCAAGGTCCAGCAGGAAGCCTGTGC...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACGCTAGTCGGGGTGCTTaGGCAGCTGAGGGCACCACC +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHASRGA*AAEGTT
Trigger: GGTGGTGCCCTCAGCTGCCCAAGCACCCCGACTAGC...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCTGCTGGCTAGTCGGGGTGCTTaGGCAGCTGAGGGCACCACC +
Preference number: 4 (lower is better)
Translates to: GGHVILFTGNQLRHQPLLASRGA*AAEGTT
Trigger: GGTGGTGCCCTCAGCTGCCCAAGCACCCCGACTAGC...CAGCAGCGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGGGGGCAGTGTACTTaGCTGATGTCCAACCATGAG +
Preference number: 4 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQWGQCT*LMSNHE
Trigger: CTCATGGTTGGACATCAGCCAAGTACACTGCCCCCA...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGCCCCCAGCGCCCTTGCGGGTaGGTACCGTCCGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: RNHNSKQSPLSPMFSVSPQRPCG*VPSGLW
Trigger: CCAGAGTCCGGACGGTACCCACCCGCAAGGGCGCTG...GGGGCTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGTCCTCTAAGCTCCCCTaGCCTCAGGGGGCAAGATCC +
Preference number: 4 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAESSKLP*PQGARS
Trigger: GGATCTTGCCCCCTGAGGCCAGGGGAGCTTAGAGGA...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGGGGCTTCTTGGTGGCTaGCATCTTCCTTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERGLLGG*HLPCPQ
Trigger: CTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCC...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGGCAGGAATGAGTGCTaGAGGCAGTGGAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCGRNEC*RQWRCL
Trigger: CAGGCACCTCCACTGCCTCCAGCACTCATTCCTGCC...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCCCACTGCAGCTCCTCTaGCTTGGCCACTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGPLQLL*LGHSFQ
Trigger: CTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCAGTGG...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTGACCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTCCACTGCAGCTCCTCTaGCTTGGCCACTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: VTSRPRISTALGGLPSASPLQLL*LGHSFQ
Trigger: CTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCAGTGG...AGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTCGTCCACTTCCTGATACAGTGTAGCTGGGCCTTGGCCCTCCAGCTTGCTGCTCCTCCAGCTCCTCAATaGCCTGCCGTACCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LVHFLIQCSWALALQLAAPPAPQ*PAVPSP
Trigger: TGGGCTCGGTACGGCAGGCCATTGAGGAGCTGGAGG...AGCAGCAAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAGGAAGTGGACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTGGAGCCAGGCACAAGCTGGTGAATaGCCTCGTCCACTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: QASDQHSSWGPALCFWSQAQAGE*PRPLPD
Trigger: ATCAGGAAGTGGACGAGGCCATTCACCAGCTTGTGC...CTGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGCACCTTCTGGGAGGTaGCATTCTCCTCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCAAPSGR*HSPPEP
Trigger: TGGCTCTGGAGGAGAATGCCACCTCCCAGAAGGTGC...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACGCACCTTCTGGGAGGTaGCATTCTCCTCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SGEVACRVYASRARRRRNAPSGR*HSPPEP
Trigger: TGGCTCTGGAGGAGAATGCCACCTCCCAGAAGGTGC...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCGGTGCTTCACGTACTGTGCATAAAGGCTGAACTGGTCCCCGTGGCGAAGGAACAGGGAGCAATGGGATaGGGCTGGCCGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SVLHVLCIKAELVPVAKEQGAMG*GWPWPR
Trigger: CCTGGGCCACGGCCAGCCCCATCCCATTGCTCCCTG...TTCCTTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGTACGTGAAGCACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGGACACCAGCCGCTGCTaGGCACTGATGCTTCGCTTG +
Preference number: 4 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEDTSRC*ALMLRL
Trigger: CAAGCGAAGCATCAGTGCCCAGCAGCGGCTGGTGTC...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TGGCGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCTCGATGCAAGTGCGTAGGGGGTGGGTaGCGCAGCCCTGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: WRRHFFRPQMTVKGSRCKCVGGG*RSPEAP
Trigger: GGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCA...CTTGCATCGAGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTCTGAACTGGTCCCCGTaGCGAAGGAAGCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LSAESTESQLCLLQGRQGLNWSP*RRKQAP
Trigger: TGGGGCCTGCTTCCTTCGCCACGGGGACCAGTTCAG...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAATATTCCCAATGCCCATaGACACCATCTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: SRPQCVGGGWRSPEAPAEYSQCP*TPSAAL
Trigger: GAGTGCAGCAGATGGTGTCCATGGGCATTGGGAATA...TTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAATCTAAGATCCCTCGACTaGCCAGGGTGGGAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PLLLLLHVQVGEAHKLVNLRSLD*PGWECC
Trigger: GCAGCACTCCCACCCTGGCCAGTCGAGGGATCTTAG...ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GACCTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGCTGCCAGGGAGGGCTaGCATGGGAGTGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: DLSAESTESQLCLLQGRQAAREG*HGSDVL
Trigger: CAGGACATCACTCCCATGCCAGCCCTCCCTGGCAGC...TTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp AGCTCCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAAACAGTAGGCAGGTACTaGGGCGACCTGTTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: SSCQPSKALIHPFMCLLETVGRY*GDLLAG
Trigger: ACCGGCCAACAGGTCGCCTCAGTACCTGCCTACTGT...TTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CATCCACCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATCTTGTGCTCACTTGGTaGGGGCAGATTGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: HPPIHVPAGRSAVAAGPDLVLTW*GQIAKG
Trigger: GCCCTTGGCAATCTGCCCTCACCAAGTGAGCACAAG...ATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGGTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR TCA 90 bp GCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGTCCCCAGGCATATGTATCTCTACCCAGTaGCTGGGAGAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ARNRSSVSCRADKVSPGICISTQ*LGEGSL
Trigger: CAGGGACCCCTCTCCCAGTCACTGGGTAGAGATACA...TATGCCTGGGGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTCCTTGCTTAAGGGACTaGGCGCAGCCAGACCATTCT +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCAPCLRD*AQPDHS
Trigger: AGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGG...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGGAGTTTGATCTCTGGTaGGGTTGCCTGCAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQEFDLW*GCLQSV
Trigger: TACACTCTGCAGGCAACCTCACCAGAGATCAAACTC...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAATCCCACCTCCAGGGTATaGAGGCAAGCAATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLLLLLHVQVGEAHKLVNPTSRV*RQAMWL
Trigger: CAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGG...ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTCGTCCACTTCCTGATACAGTGTAGCTGGGCCTTGGCCCTCCAGCTTGCTGCTACAGGGCGGCGAGAGTaGTCTGCACACAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LVHFLIQCSWALALQLAATGRRE*SAHSPP
Trigger: TGGAGGACTGTGTGCAGAGCACTCTCGCCGCCCTGT...AGCAGCAAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAGGAAGTGGACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGACCTTGGCAAGCAGGTaGTTGGCTGGTACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERTLASR*LAGTRK
Trigger: CTTCCTGGTACCAGCCAAGCACCTGCTTGCCAAGGT...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGCCCCCCTGGGCGCAGCAGTTaGCAGGGTAGGGCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: RNHNSKQSPLSPMFSVSPPGRSS*QGRAAS
Trigger: GCTAGCAGCCCTACCCTGGCAACTGCTGCGCCCAGG...GGGGCTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCACCTCCAAGACTGCTaGCTCTGGGACAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQHLQDC*LWDSLS
Trigger: GCTGAGGCTGTCCCAGAGGCAGCAGTCTTGGAGGTG...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGCAAGAGCCCCTCGACCTaGAGCTCGCTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPAARVPVVSTSCLPPQCKSPST*SSLLSS
Trigger: AGAAGAAAGAAGCGAGCTGCAGGTCGAGGGGCTCTT...GCACTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTTGGAGGCAGTGGAGGTaGCTGACGAAGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LSAESTESQLCLLQGRQGWRQWR*LTKVQQ
Trigger: CTGCTGGACCTTCGTCAGGCACCTCCACTGCCTCCA...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGCAAGGCAGGAATGAGTaGTGGAGGCAGTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEQGRNE*WRQWRC
Trigger: GCACCTCCACTGCCTCCAGCACTCATTCCTGCCTTG...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTCGTCCACTTCCTGATACAGTGTAGCTGGGCCTTGGCCCTCCAGCTTGCTGCTAGCTCCTCAATGGCCTaGCGTACCGAGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: LVHFLIQCSWALALQLAASSSMA*RTEPST
Trigger: TGTGCTGGGCTCGGTACGGCAGGCCATTGAGGAGCT...AGCAGCAAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAGGAAGTGGACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAATAGGCATAGCAAAGCTTaGCAGCTGCTCCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLLLLLHVQVGEAHKLVNRHSKA*QLLLPW
Trigger: CCAGGGGAGGAGCAGCTGGCAAGCTTTGCTATGCCT...ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAACTGGGCCCCTCCACTaGTGGCACCGTCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TPVDLAEMILLRESQGVRTGPLH*WHRLPA
Trigger: GGCGGGCAGACGGTGCCAGCAGTGGAGGGGCCCAGT...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGCCGTGGCCCAGGGCTaGTGGGGAGCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCAVAQG*WGAARS
Trigger: GCTCCTTGCTGCTCCCCAGCAGCCCTGGGCCACGGC...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AACAGGAGGAGATGCTCGAAGAGAAAGACATGGCGAAGGCACTTCTTTCGGCCAGCCGTGGCCCAGGGCTaGTGGGGAGCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NRRRCSKRKTWRRHFFRPAVAQG*WGAARS
Trigger: GCTCCTTGCTGCTCCCCAGCAGCCCTGGGCCACGGC...TGGCCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAAGAAGAGTGTATGCCTCTCGTaGACGCCGCCGCCGAAACCA +
Preference number: 4 (lower is better)
Translates to: PASRAKPSSTHSCACWKKSVCLS*TPPPKP
Trigger: TGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACT...CTTCTTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTCCCATGGACACCATCTaGTGCACTCGGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCPMDTI*CTRSSL
Trigger: CAAGGAGCTCCGAGTGCAGCAGATGGTGTCCATGGG...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGGGGGCCAGGGAAATTTaGTTGACGTCCAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERGAREI*LTSRSQ
Trigger: CTGGGATCTGGACGTCAAGCAAATTTCCCTGGCCCC...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR GCA 90 bp TCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTGCCTGGGGCCAGGGAAATTTaGTTGACGTCCAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: SAGDLPAPSAVAWAFPLPGAREI*LTSRSQ
Trigger: CTGGGATCTGGACGTCAAGCAAATTTCCCTGGCCCC...AGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR CCA 90 bp TGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCTGTTGCCTCAAAGGGTaGATACAGGGCGGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: CLSCTPPPKPQLKAESAVCCLKG*IQGGES
Trigger: ACTCTCGCCGCCCTGTATCCACCCTTTGAGGCAACA...GACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTAGCGGCCACCCCTCATaGAAGAAGAGGAATCCACTG +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCASGHPS*KKRNPL
Trigger: CAGTGGATTCCTCTTCTTCCATGAGGGGTGGCCGCT...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGTCCCCAGGCATACAGATAGAAGTCTCCTaGGCGCAGCAGTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ARNRSSVSCRADKVSPGIQIEVS*AQQLPG
Trigger: CCCTGGCAACTGCTGCGCCCAGGAGACTTCTATCTG...TATGCCTGGGGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CACCTGCTGGAGTCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGTTTGTGCACAAATCGTaGACAGATGAGCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: HLLESPQALPLLLLLHVQFVHKS*TDELSP
Trigger: TGGGCTGAGCTCATCTGTCCACGATTTGTGCACAAA...CTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACTCCAGCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTTCCTCTAAGCTCCCCTaGCCTCAGGGGGCAAGATCC +
Preference number: 4 (lower is better)
Translates to: LSAESTESQLCLLQGRQGSSKLP*PQGARS
Trigger: GGATCTTGCCCCCTGAGGCCAGGGGAGCTTAGAGGA...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAATGGGCTTCTTGGTGGCTaGCATCTTCCTTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLLLLLHVQVGEAHKLVNGLLGG*HLPCPQ
Trigger: CTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCC...ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCAAGGGCTTCTTGGTaGCTGGCATCTTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CLSCTPPPKPQLKAESAVPRASW*LASSLS
Trigger: GGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGG...GACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGAGCCCAGCACACCTTaGCACAGGCGACATAGCCTT +
Preference number: 4 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCEPSTP*HRRHSL
Trigger: AAGGCTATGTCGCCTGTGCCAAGGTGTGCTGGGCTC...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGCTGATACAGTGTAGCTaGGCCTTGGCCCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERLIQCS*ALALQL
Trigger: AAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAG...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTAGGGCCCGCATCTCCTaGAAGGTGCCGGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSRARIS*KVPALG
Trigger: GCCCAGTGCCGGCACCTTCCAGGAGATGCGGGCCCT...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGAGGGCCCGCATCTCCTaGAAGGTGCCGGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWRARIS*KVPALG
Trigger: GCCCAGTGCCGGCACCTTCCAGGAGATGCGGGCCCT...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGCTCCTCTCTAGCTCTTaGCAGCGGGCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQLLSSS*QRAWQR
Trigger: CCGCTGCCAGGCCCGCTGCCAAGAGCTAGAGAGGAG...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGATAGTCCTCTCCACATaGGGCCAGGGAGCAATGGGA +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERIVLST*GQGAMG
Trigger: TCCCATTGCTCCCTGGCCCCATGTGGAGAGGACTAT...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCCTGAACTGGTCCCCGTaGCGAAGGAAGCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCLNWSP*RRKQAP
Trigger: TGGGGCCTGCTTCCTTCGCCACGGGGACCAGTTCAG...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTCGGAGCTCCTTGTTGTaGGCTGCCTGTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LSAESTESQLCLLQGRQGRSSLL*AACLHS
Trigger: GCTGTGGAGACAGGCAGCCCACAACAAGGAGCTCCG...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCGGCAGGGCAATACTCTaGTCGTTAGACCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGGRAIL*SLDLLC
Trigger: ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCC...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTCTCTGGGAGCCACTGTaGAGGAGACACATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCALWEPL*RRHILP
Trigger: TGGGAGAATGTGTCTCCTCCACAGTGGCTCCCAGAG...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp TGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCAAGCTACATCAGGGTaGTCAGAGACGGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: CLSCTPPPKPQLKAESAVQATSG*SETETA
Trigger: TGCAGTCTCCGTCTCTGATCACCCTGATGTAGCTTG...GACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTGGAGCCAGGAAGGTCATCATGAATaGGAATCAGCAGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: QASDQHSSWGPALCFWSQEGHHE*ESAAAE
Trigger: TTCAGCGGCTGCTGATTCTCATTCATGATGACCTTC...CTGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GCAGTGTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTCACGTGTTCCCGTGGTaGGCACGTCCTGTCTACCAC +
Preference number: 4 (lower is better)
Translates to: AVWEKELQRVCGTSGSHCHVFPW*ARPVYH
Trigger: GTGGTAGACAGGACGTGCTCACCACGGGAACACGTG...ACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCACACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAGGCATGCTCAAAGGATaGCACGGCCACGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRGMLKG*HGHGGP
Trigger: CGGGCCTCCGTGGCCGTGTCATCCTTTGAGCATGCC...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR TCA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCCTCAGGGCTCGAGCATaGCTCTGTCGGGATAGCCCT +
Preference number: 4 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCLRARA*LCRDSP
Trigger: AGGGCTATCCCGACAGAGTCATGCTCGAGCCCTGAG...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACACAGGGCGGCGAGAGTaGTCTGCACACAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHTGRRE*SAHSPP
Trigger: TGGAGGACTGTGTGCAGAGCACTCTCGCCGCCCTGT...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCACAGGGTGGGGGCTGTTaGCTCAAAGGGTGGATACAG +
Preference number: 4 (lower is better)
Translates to: LQSVCLSCTPPPKPQLKAQGGGC*LKGWIQ
Trigger: CTGTATCCACCCTTTGAGGCAACAGCCCCCACCCTG...TGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCCAATAAACAGGTGCAGGGGAGGCTCCGGTaGTGCTCCCCTCGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LVRFLSSLLQSRVPNKQVQGRLR*CSPRRV
Trigger: CACCCGGCGAGGGGAGCAGCACCGGAGCCTCCCCTG...CACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp GAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCAGACACCTCCAAGACTaGTGCCTCTGGGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: ECMPLVHAAAETTTQSRVRHLQD*CLWDSL
Trigger: GAGGCTGTCCCAGAGGCAGCAGTCTTGGAGGTGTCT...GACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCTGGGCCTGTGTGTCCTaGCATACACAGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCWACVS*HTQQAW
Trigger: CCAGGCCTGCTGTGTATGGCAGGACACACAGGCCCA...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp GCAGTGTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTAGCTCCTCAATGGCCTaGCGTACCGAGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: AVWEKELQRVCGTSGSHCSSSMA*RTEPST
Trigger: TGTGCTGGGCTCGGTACGGCAGGCCATTGAGGAGCT...ACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCACACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp GAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCTTGGGCATTCCCACTaGCTCCTCTTCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ECMPLVHAAAETTTQSRVLGHSH*LLFLWL
Trigger: GAGCCAGAGGAAGAGGAGGCAGTGGGAATGCCCAAG...GACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCCACTGCCGCTGCTCTTaGTGCTGCACGTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCHCRCS*CCTCRL
Trigger: CAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTG...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTGGGCCCGAGAGCCACTaGAACACCTGCTGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSGPESH*NTCWSR
Trigger: GCGACTCCAGCAGGTGTTGCAGTGGCTCTCGGGCCC...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGACCATTCTCGCAGGGCTaGTGGGCTGCCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRPFSQG*WAAQVQ
Trigger: CTGGACCTGGGCAGCCCAGCAGCCCTGCGAGAATGG...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGTGTCCGGTGGAAGCTaGGAAGCCTTTCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: AAETTTQSRVRCPRCFLSVSGGS*EAFPGH
Trigger: GTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC...TGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTGACCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTGCTGAGAGGAGAAGCTaGACGCAAGTTCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: VTSRPRISTALGGLPSASAERRS*TQVLDL
Trigger: AAGATCCAGAACTTGCGTGCAGCTTCTCCTCTCAGC...AGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCTCCATTATGCCCCACTaGCATCCCAGCCCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: CLSCTPPPKPQLKAESAVSIMPH*HPSPKC
Trigger: ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGA...GACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCAGGAATCCACTGTATTaGGCACAGGCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CLSCTPPPKPQLKAESAVRNPLY*AQASCW
Trigger: CCAGCAGGAAGCCTGTGCCCAATACAGTGGATTCCT...GACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CATCCACCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATAGCGGCCACCCCTCATaGAAGAAGAGGAATCCACTG +
Preference number: 4 (lower is better)
Translates to: HPPIHVPAGRSAVAAGPDSGHPS*KKRNPL
Trigger: CAGTGGATTCCTCTTCTTCCATGAGGGGTGGCCGCT...ATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGGTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAATAGCGGCCACCCCTCATaGAAGAAGAGGAATCCACTG +
Preference number: 4 (lower is better)
Translates to: PLLLLLHVQVGEAHKLVNSGHPS*KKRNPL
Trigger: CAGTGGATTCCTCTTCTTCCATGAGGGGTGGCCGCT...ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTCGTCCACTTCCTGATACAGTGTAGCTGGGCCTTGGCCCTCCAGCTTGCTGCTCAGATAGAAGTCTCCTaGGCGCAGCAGTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LVHFLIQCSWALALQLAAQIEVS*AQQLPG
Trigger: CCCTGGCAACTGCTGCGCCCAGGAGACTTCTATCTG...AGCAGCAAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAGGAAGTGGACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CATCCACCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATAGGCACAAGCCTCATTaGGCACAGGAACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HPPIHVPAGRSAVAAGPDRHKPH*AQEPPA
Trigger: TGCAGGAGGTTCCTGTGCCCAATGAGGCTTGTGCCT...ATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGGTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCATCCCTCTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTTGTGCACAAATCGTaGACAGATGAGCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PSLCSAVSRGSASTFCSGFVHKS*TDELSP
Trigger: TGGGCTGAGCTCATCTGTCCACGATTTGTGCACAAA...GCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAGAGGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCCGAGGGGTACCAGGTaGTCCTTCAGCCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QARETRDSGGRAILWSLDPRGTR*SFSPLA
Trigger: GGCCAGGGGGCTGAAGGACCACCTGGTACCCCTCGG...GTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGCCAAGGGCTTCTTGGTaGCTGGCATCTTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEPRASW*LASSLS
Trigger: GGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGG...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTGACCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTTGCAAGGGCCTCTTCTaGAATGTTGTCCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VTSRPRISTALGGLPSASCKGLF*NVVPFS
Trigger: GGAAAAGGGGACAACATTCCAGAAGAGGCCCTTGCA...AGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCAGCACCTTCTGCAGTaGCTTGGGCATTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: ECMPLVHAAAETTTQSRVQHLLQ*LGHSHC
Trigger: GCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTG...GACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGCTCCTCTCTAGCTCTTaGCAGCGGGCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWLLSSS*QRAWQR
Trigger: CCGCTGCCAGGCCCGCTGCCAAGAGCTAGAGAGGAG...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCTTGCTTAAGGGACTGAGCGCAGCCAGACCATTCTCCAGTTTGTGTCGGTGCGACACCAGCCGCTGCTaGGCACTGATGCTTCGCTTG +
Preference number: 4 (lower is better)
Translates to: PLLKGLSAARPFSSLCRCDTSRC*ALMLRL
Trigger: CAAGCGAAGCATCAGTGCCCAGCAGCGGCTGGTGTC...GCACCGACACAAACTGGAGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCCCCAGGGGGTGGCACTaGCTCACTCAAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFPRGWH*LTQGGH
Trigger: GTGGCCACCTTGAGTGAGCCAGTGCCACCCCCTGGG...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCACTCAGGCCCAGGGGGTaGCACTGGCTCACTCAAGGT +
Preference number: 4 (lower is better)
Translates to: AAETTTQSRVRCPRCFLSLRPRG*HWLTQG
Trigger: ACCTTGAGTGAGCCAGTGCCACCCCCTGGGCCTGAG...TGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TGGCGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCTCGATGCAAGCTGAACTGGTCCCCGTaGCGAAGGAAGCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: WRRHFFRPQMTVKGSRCKLNWSP*RRKQAP
Trigger: TGGGGCCTGCTTCCTTCGCCACGGGGACCAGTTCAG...CTTGCATCGAGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAGTGTGTCGAAGAGAAAGACATaGCGAAGGCACTTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: PQCVGGGWRSPEAPAESVSKRKT*RRHFFR
Trigger: CCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGA...CACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGCTCGACTGGCCAGGGTaGGAGTGCTGCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWLDWPG*ECCSQG
Trigger: ACCCTGGGAGCAGCACTCCCACCCTGGCCAGTCGAG...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGATGTCCTGGATACAGTaGCCCAGGATGGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERMSWIQ*PRMGKH
Trigger: GTGCTTTCCCATCCTGGGCCACTGTATCCAGGACAT...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCCAGGCTTCAGAGAGCTaGGGCTCTTTCTCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCQASES*GSFSPA
Trigger: AGCAGGCGAGAAAGAGCCTCAGCTCTCTGAAGCCTG...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp GCAGTGTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTCCCCTCCCGTCAGGATaGGGAATCCAGATGCCATCA +
Preference number: 4 (lower is better)
Translates to: AVWEKELQRVCGTSGSHCPLPSG*GIQMPS
Trigger: TGATGGCATCTGGATTCCTCATCCTGACGGGAGGGG...ACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp GGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGCGAAGGTCATCATGAATaGGAATCAGCAGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: GPAARVPVVSTSCLPPQCEGHHE*ESAAAE
Trigger: TTCAGCGGCTGCTGATTCTCATTCATGATGACCTTC...GCACTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTGGAGAGGGGTCCCTGTaGCCTCCTAACTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSGEGSL*PPNSHC
Trigger: GCAGTGGGAGTTAGGAGGTCACAGGGACCCCTCTCC...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCCCACCTCAGTGCTGGTaGCCTCCAGGCCTCGGATCA +
Preference number: 4 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFPPQCW*PPGLGS
Trigger: TGATCCGAGGCCTGGAGGTCACCAGCACTGAGGTGG...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAGCCGCTGCTGGGCACTaGTGCTTCGCTTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: TPVDLAEMILLRESQGVRAAAGH*CFACAP
Trigger: TGGAGCGCAAGCGAAGCATCAGTGCCCAGCAGCGGC...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCTGGGTGGCGCAGCCCTaGAGCTCCCGCAGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFWVAQP*SSRRKC
Trigger: ACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCA...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTCCCCAAGGGCTTTaGTGTCCAGGAAGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCAPQGL*CPGRVY
Trigger: ATAAACCCTTCCTGGACATCAAAGCCCTTGGGGAGC...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGTCCCCAGGCATAGCTCCCCAAGGGCTTTaGTGTCCAGGAAGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: ARNRSSVSCRADKVSPGIAPQGL*CPGRVY
Trigger: ATAAACCCTTCCTGGACATCAAAGCCCTTGGGGAGC...TATGCCTGGGGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCAGCGTGTACCTCAGTaGGTCCTCCCGATAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQQRVPQ*VLPISP
Trigger: AGGACTTATCGGGAGGACGCACTGAGGTACACGCTG...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAAGAAGCAGCGTGTACCTCAGTaGGTCCTCCCGATAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PASRAKPSSTHSCACWKKQRVPQ*VLPISP
Trigger: AGGACTTATCGGGAGGACGCACTGAGGTACACGCTG...CTTCTTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTACCACCACCTGTTCATaGAGGCAGAGCGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSTTTCS*RQSGHP
Trigger: GGGGTGGCCGCTCTGCCTGCATGAACAGGTGGTGGT...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCCACAGAGTTCAGTTGGAAGGTCATCATGAATGAGAATCAGCAGCCGCTGAACGGCACAGGAACCTCCTaGACCCGCCCACCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: STEFSWKVIMNENQQPLNGTGTS*TRPPPG
Trigger: CCCTGGGGGTGGGCGGGTGCAGGAGGTTCCTGTGCC...GTTCAGCGGCTGCTGATTCTCATTCATGATGACCTTCCAACTGAACTCTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCGGTGCTTCACGTACTGTGCATAAAGGCTGAACTGGTCCCCGTGGCGAAGGAATGGGCCTGTGTGTCCTaGCATACACAGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SVLHVLCIKAELVPVAKEWACVS*HTQQAW
Trigger: CCAGGCCTGCTGTGTATGGCAGGACACACAGGCCCA...TTCCTTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGTACGTGAAGCACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR GCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCGATGAGGAATCCAGATaGCATCAAGTCCCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGDEESR*HQVPSY
Trigger: GTAGCTTGGGACTTGATGGCATCTGGATTCCTCATC...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GACCTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAATTCCTCTGGCTCTGCTaGTCCCTCCAGCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: DLSAESTESQLCLLQGRQFLWLC*SLQLLN
Trigger: ATTGAGGAGCTGGAGGGAGCAGCAGAGCCAGAGGAA...TTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGACTTGGCCCTCCAGCTTaGTGCTGGGAGTGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRLGPPA*CWEWSA
Trigger: TGCGCTCCACTCCCAGCAGCAAGCTGGAGGGCCAAG...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCATGCCGCTGCTCTTGCTaGTGCACGTGCAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AAETTTQSRVRCPRCFLSCRCSC*CTCRLE
Trigger: CTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCA...TGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TGGCGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCTCGATGCAAGCACTGCCGCTGCTCTTaGTGCTGCACGTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: WRRHFFRPQMTVKGSRCKHCRCS*CCTCRL
Trigger: CAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTG...CTTGCATCGAGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGAGCCACTGCAACACCTaGTGGAGTCGCCGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: TQGGHVILFTGNQLRHQPSHCNT*WSRRRH
Trigger: GTGCCTGCGGCGACTCCAGCAGGTGTTGCAGTGGCT...CGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGACCATTCTCGCAGGGCTaGTGGGCTGCCCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TPVDLAEMILLRESQGVRPFSQG*WAAQVQ
Trigger: CTGGACCTGGGCAGCCCAGCAGCCCTGCGAGAATGG...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGCAGCTCTTGGGGGCCTaGCCTCTGCTTCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQQLLGA*PLLLEP
Trigger: TGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTG...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCGGTGCTTCACGTACTGTGCATAAAGGCTGAACTGGTCCCCGTGGCGAAGGAATCAGACACCAGCCGCTaGTGGGCACTGATGCTTCGC +
Preference number: 4 (lower is better)
Translates to: SVLHVLCIKAELVPVAKESDTSR*WALMLR
Trigger: GCGAAGCATCAGTGCCCAGCAGCGGCTGGTGTCTGA...TTCCTTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGTACGTGAAGCACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATGTGCTTCACGTACTGTaGATAAAGGCTGAACTGGTC +
Preference number: 4 (lower is better)
Translates to: LQCRQPGICQHLLQWLGHVLHVL*IKAELV
Trigger: GACCAGTTCAGCCTTTATGCACAGTACGTGAAGCAC...ATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCTGCAAGAGCTGTCCCTaGTCCTTCAGATCTATCTCA +
Preference number: 4 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGCKSCP*SFRSIS
Trigger: TGAGATAGATCTGAAGGAGCAGGGACAGCTCTTGCA...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCCTTGCTTAAGGGACTGAGCGCAGCCAGACCATTCTCCAGTTTGTGTCGGTGCGTGAAGGGGTCTCGATaGAAGAGCTGTCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PLLKGLSAARPFSSLCRCVKGSR*KSCPCS
Trigger: GGAGCAGGGACAGCTCTTGCATCGAGACCCCTTCAC...GCACCGACACAAACTGGAGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGGCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTGCCTGCAGAGTGTATaGCTCTCGTGCACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RLGLFLGPGDTSPEESSVCLQSV*LSCTPP
Trigger: CGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCA...AACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACCTCCTTGTTGTGGGCTaGCTGTCTCCACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHLLVVG*LSPQQL
Trigger: CAGCTGCTGTGGAGACAGGCAGCCCACAACAAGGAG...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGAGGGAGGGGCCGGCATaGTCAAAGGATGACACGGCC +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWREGPA*SKDDTA
Trigger: GGCCGTGTCATCCTTTGAGCATGCCGGCCCCTCCCT...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR GCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGCTGAGAGGAGAAGCTaGACGCAAGTTCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCAAERRS*TQVLDL
Trigger: AAGATCCAGAACTTGCGTGCAGCTTCTCCTCTCAGC...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCACACACAGTCCTCCACTaGCTCAGGCTCCATGGCTCG +
Preference number: 4 (lower is better)
Translates to: AAETTTQSRVRCPRCFLSHTVLH*LRLHGS
Trigger: CGAGCCATGGAGCCTGAGCCAGTGGAGGACTGTGTG...TGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GACCTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAATGTTGCCTCAAAGGGTaGATACAGGGCGGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: DLSAESTESQLCLLQGRQCCLKG*IQGGES
Trigger: ACTCTCGCCGCCCTGTATCCACCCTTTGAGGCAACA...TTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGAATCCACTGTATTaGGCACAGGCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAERNPLY*AQASCW
Trigger: CCAGCAGGAAGCCTGTGCCCAATACAGTGGATTCCT...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCGACTCTGGAGAGGCCTaGGGAGCCTTCAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCDSGEA*GAFSIC
Trigger: ACAGATGCTGAAGGCTCCCCAGGCCTCTCCAGAGTC...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp ACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGGTACCGTCCGGACTCTaGAGAGGCCTGGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: TQGGHVILFTGNQLRHQPVPSGL*RGLGSL
Trigger: AAGGCTCCCCAGGCCTCTCCAGAGTCCGGACGGTAC...CGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGCCGAGGGGTACCAGGTaGTCCTTCAGCCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKEPRGTR*SFSPLA
Trigger: GGCCAGGGGGCTGAAGGACCACCTGGTACCCCTCGG...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTTTGCCAAGGGCTTCTTaGTGGCTGGCATCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCLPRAS*WLASSL
Trigger: CAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAA...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCGGTGCTTCACGTACTGTGCATAAAGGCTGAACTGGTCCCCGTGGCGAAGGAAGGCAGGAATGAGTGCTaGAGGCAGTGGAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SVLHVLCIKAELVPVAKEGRNEC*RQWRCL
Trigger: CAGGCACCTCCACTGCCTCCAGCACTCATTCCTGCC...TTCCTTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGTACGTGAAGCACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CATCCACCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGCACAAGCTGGTGAATaGCCTCGTCCACTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: HPPIHVPAGRSAVAAGPDAQAGE*PRPLPD
Trigger: ATCAGGAAGTGGACGAGGCCATTCACCAGCTTGTGC...ATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGGTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCCACTGCAACACCTGCTaGAGTCGCCGCAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFHCNTC*SRRRHC
Trigger: GCAGTGCCTGCGGCGACTCCAGCAGGTGTTGCAGTG...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGTCCCCAGGCATAATATCCAGCACCTTCTaGGAGGTGGCATTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ARNRSSVSCRADKVSPGIISSTF*EVAFSS
Trigger: GGAGGAGAATGCCACCTCCCAGAAGGTGCTGGATAT...TATGCCTGGGGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGAGGGCCCGCATCTCCTaGAAGGTGCCGGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLRARIS*KVPALG
Trigger: GCCCAGTGCCGGCACCTTCCAGGAGATGCGGGCCCT...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGTCTTGGCAGCGGGCCTaGCAGCGGCCCCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAESWQRA*QRPHSR
Trigger: GCGAGAATGGGGCCGCTGCCAGGCCCGCTGCCAAGA...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp GAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCATAGTCCTCTCCACATaGGGCCAGGGAGCAATGGGA +
Preference number: 4 (lower is better)
Translates to: ECMPLVHAAAETTTQSRVIVLST*GQGAMG
Trigger: TCCCATTGCTCCCTGGCCCCATGTGGAGAGGACTAT...GACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCCCAGGGGGTGGCACTaGCTCACTCAAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QARETRDSGGRAILWSLDPRGWH*LTQGGH
Trigger: GTGGCCACCTTGAGTGAGCCAGTGCCACCCCCTGGG...GTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGCTCAGGCCCAGGGGGTaGCACTGGCTCACTCAAGGT +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQLRPRG*HWLTQG
Trigger: ACCTTGAGTGAGCCAGTGCCACCCCCTGGGCCTGAG...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCAAGGGCCAGCCTCCATaGAGCCCTTGCTTAAGGGAC +
Preference number: 4 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCKGQPP*SPCLRD
Trigger: GTCCCTTAAGCAAGGGCTCCATGGAGGCTGGCCCTT...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGAGAGTCAAGTGTTTCTaGGGCCAGGGAAATTTGCTT +
Preference number: 4 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQRVKCF*GQGNLL
Trigger: AAGCAAATTTCCCTGGCCCCAGAAACACTTGACTCT...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR CCA 90 bp AGGCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTGTCACAGAGGCGTGGTaGGGTCACTCAGGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: RLGLFLGPGDTSPEESSVVTEAW*GHSGLE
Trigger: CTCGAGCCCTGAGTGACCCCACCACGCCTCTGTGAC...AACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGCAGGTCACAGAGGCGTaGTGGGGTCACTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQQVTEA*WGHSGL
Trigger: GAGCCCTGAGTGACCCCACCACGCCTCTGTGACCTG...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR CAA 72 bp GGGTGGCACTGGCTCACTCAAGGTGGCCACGTAATCTaGTTCACAGGCAATCAGCTCAGACACCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GWHWLTQGGHVI*FTGNQLRHQPL
Trigger: CAGCGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGTGAGCCAGTGCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGGCTGATGTCCAACCATaGGGCCCTCTTTGTGCACAA +
Preference number: 4 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQADVQP*GPLCAQ
Trigger: TTGTGCACAAAGAGGGCCTCATGGTTGGACATCAGC...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAGGCTCAAGGCAGGAATaGGTGCTGGAGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRGSRQE*VLEAVE
Trigger: CTCCACTGCCTCCAGCACTCATTCCTGCCTTGAGCC...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGAGGCGCACAAGCTGGTaGATGGCCTCGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQRRTSW*MASSTS
Trigger: GGAAGTGGACGAGGCCATTCACCAGCTTGTGCGCCT...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGCCTGGACCTCAGCGCTaGAAGCACGGAATCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWPGPQR*KHGIAA
Trigger: AGCTGCGATTCCGTGCTTTCAGCGCTGAGGTCCAGG...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGACCACCTCAGTGCTGGTaGCCTCCAGGCCTCGGATCA +
Preference number: 4 (lower is better)
Translates to: TPVDLAEMILLRESQGVRPPQCW*PPGLGS
Trigger: TGATCCGAGGCCTGGAGGTCACCAGCACTGAGGTGG...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGGAGTTTGATCTCTGGTaGGGTTGCCTGCAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAEEFDLW*GCLQSV
Trigger: TACACTCTGCAGGCAACCTCACCAGAGATCAAACTC...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACCCAGGGAAATTTGCTTaGCGTCCAGATCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHPGKFA*RPDPRP
Trigger: AGGCCTGGGATCTGGACGTCAAGCAAATTTCCCTGG...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR TCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGGGGCTGGCATGGGAGTaGTGTCCTGGATACAGTGGC +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQGLAWE*CPGYSG
Trigger: GCCACTGTATCCAGGACATCACTCCCATGCCAGCCC...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAGCGGCGAGAGTGCTCTaGACACAGTCCTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: TPVDLAEMILLRESQGVRAARVL*TQSSTG
Trigger: GCCAGTGGAGGACTGTGTGCAGAGCACTCTCGCCGC...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGCCTGGGCGCAGCAGTTaGCAGGGTAGGGCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKEPGRSS*QGRAAS
Trigger: GCTAGCAGCCCTACCCTGGCAACTGCTGCGCCCAGG...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGATGAGGCCCTCTTTGTaGACAAATCGTGGACAGATG +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERMRPSL*TNRGQM
Trigger: CATCTGTCCACGATTTGTGCACAAAGAGGGCCTCAT...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGCACCTCCAAGACTGCTaGCTCTGGGACAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQHLQDC*LWDSLS
Trigger: GCTGAGGCTGTCCCAGAGGCAGCAGTCTTGGAGGTG...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTTCTCCCACAGCCTCTaGTGGGGGCTCAGACACCTC +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWFSHSL*WGLRHL
Trigger: GAGGTGTCTGAGCCCCCAGCAGAGGCTGTGGGAGAA...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTTGGAGGCAGTGGAGGTaGCTGACGAAGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSWRQWR*LTKVQQ
Trigger: CTGCTGGACCTTCGTCAGGCACCTCCACTGCCTCCA...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGTGGAGGCAGTGGAGGTaGCTGACGAAGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TQGGHVILFTGNQLRHQPWRQWR*LTKVQQ
Trigger: CTGCTGGACCTTCGTCAGGCACCTCCACTGCCTCCA...CGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAAGCTCCTCAATGGCCTaGCGTACCGAGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRSSSMA*RTEPST
Trigger: TGTGCTGGGCTCGGTACGGCAGGCCATTGAGGAGCT...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTCGTCAGCCGGGGATCTaGCAGCACCTTCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCRQPGI*QHLLQW
Trigger: CCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACG...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGCCCATCCCTCTGCAGTaGCGTCAGCCGGGGATCTGC +
Preference number: 4 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAEPIPLQ*RQPGIC
Trigger: GCAGATCCCCGGCTGACGGCACTGCAGAGGGATGGG...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTCTTGGCCCTCCAGCTTaGTGCTGGGAGTGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCLGPPA*CWEWSA
Trigger: TGCGCTCCACTCCCAGCAGCAAGCTGGAGGGCCAAG...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTTGCCGCTGCTCTTGCTaGTGCACGTGCAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSCRCSC*CTCRLE
Trigger: CTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCA...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGCGCAGGCACTGCCGCTaGTCTTGCTGCTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLRRHCR*SCCCTC
Trigger: GCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCG...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTACCCATTCATGTGCCTaGTGGAAGAAGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LSAESTESQLCLLQGRQGTHSCA*WKKRCS
Trigger: GCTACAGCGCTTCTTCCAGCAGGCACATGAATGGGT...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGGCATCTCCTGGAAGGTaGCGGCACTGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKEASPGR*RHWALG
Trigger: CCCCAGAGCCCAGTGCCGGCACCTTCCAGGAGATGC...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGTGGGGGCCTGCCCTCTaGTTCTGGAGCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLWGPAL*FWSQLR
Trigger: CCTGAGCTGGCTCCAGAAGCAGAGGGCAGGCCCCCA...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGTGCTTCACGTACTGTaGATAAAGGCTGAACTGGTC +
Preference number: 4 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCAVLHVL*IKAELV
Trigger: GACCAGTTCAGCCTTTATGCACAGTACGTGAAGCAC...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGTGCAAGAGCTGTCCCTaGTCCTTCAGATCTATCTCA +
Preference number: 4 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERCKSCP*SFRSIS
Trigger: TGAGATAGATCTGAAGGAGCAGGGACAGCTCTTGCA...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTGCCTCTGAACAGGAGGAGATaGTCGAAGAGAAAGACATGG +
Preference number: 4 (lower is better)
Translates to: SAGDLPAPSAVAWAFPLPLNRRR*SKRKTW
Trigger: CCATGTCTTTCTCTTCGAGCATCTCCTCCTGTTCAG...AGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCCCAGGGCTCCATTATaGCCCACTGCCATCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QARETRDSGGRAILWSLDPRAPL*PTAIPA
Trigger: GGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGG...GTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGGGCTGCTCTGACTCCTaGAGGAGAAGGCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQGCSDS*RRRHQA
Trigger: AGCTTGGTGCCTTCTCCTGCAGGAGTCAGAGCAGCC...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGCTGGCTCAGGCTCCATaGCTCGGCGCCGGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLLAQAP*LGAGPR
Trigger: ACGCGGCCCGGCGCCGAGCCATGGAGCCTGAGCCAG...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGCACACAGTCCTCCACTaGCTCAGGCTCCATGGCTCG +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQHTVLH*LRLHGS
Trigger: CGAGCCATGGAGCCTGAGCCAGTGGAGGACTGTGTG...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AACAGGAGGAGATGCTCGAAGAGAAAGACATGGCGAAGGCACTTCTTTCGGCCAACCACCTGGAACACCTaGCCCAACAGGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: NRRRCSKRKTWRRHFFRPTTWNT*PNRVGA
Trigger: AGCCCCCACCCTGTTGGGCCAGGTGTTCCAGGTGGT...TGGCCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCTGGCAAGCAGGTGCTTaGCTGGTACCAGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCWQAGA*LVPGSP
Trigger: TGGACTTCCTGGTACCAGCCAAGCACCTGCTTGCCA...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTAGGAATCCACTGTATTaGGCACAGGCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSAESTESQLCLLQGRQGRNPLY*AQASCW
Trigger: CCAGCAGGAAGCCTGTGCCCAATACAGTGGATTCCT...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCTGCTGAGGCACAAGCCTCATTaGGCACAGGAACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GGHVILFTGNQLRHQPLLRHKPH*AQEPPA
Trigger: TGCAGGAGGTTCCTGTGCCCAATGAGGCTTGTGCCT...CAGCAGCGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACAGGGCTGGGAAGCCCTaGAGGTCCAGAGGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: QARETRDSGGRAILWSLDRAGKP*RSRGQF
Trigger: GAACTGCCCTCTGGACCTCCAGGGCTTCCCAGCCCT...GTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAGCCTTCAGCATCTGTTaGGCTCCCCCTCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: TPVDLAEMILLRESQGVRAFSIC*APPHGQ
Trigger: CTGCCCGTGAGGGGGAGCCCAACAGATGCTGAAGGC...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AACAGGAGGAGATGCTCGAAGAGAAAGACATGGCGAAGGCACTTCTTTCGGCCAGTACCGTCCGGACTCTaGAGAGGCCTGGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: NRRRCSKRKTWRRHFFRPVPSGL*RGLGSL
Trigger: AAGGCTCCCCAGGCCTCTCCAGAGTCCGGACGGTAC...TGGCCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCCACAGAGTTCAGTTGGAAGGTCATCATGAATGAGAATCAGCAGCCGCTGAACGGCCCCAGGCCCTTCTaGTGCATCCACGCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: STEFSWKVIMNENQQPLNGPRPF*CIHARC
Trigger: ACACCGGGCGTGGATGCACCAGAAGGGCCTGGGGCC...GTTCAGCGGCTGCTGATTCTCATTCATGATGACCTTCCAACTGAACTCTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGGCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTGAGTGCTGGAGGCAGTaGAGGTGCCTGACGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RLGLFLGPGDTSPEESSVECWRQ*RCLTKV
Trigger: GACCTTCGTCAGGCACCTCCACTGCCTCCAGCACTC...AACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGAGCCCAGCACACCTTaGCACAGGCGACATAGCCTT +
Preference number: 4 (lower is better)
Translates to: AAETTTQSRVRCPRCFLSEPSTP*HRRHSL
Trigger: AAGGCTATGTCGCCTGTGCCAAGGTGTGCTGGGCTC...TGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGACCTCCAGCTCCTCAATaGCCTGCCGTACCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TPVDLAEMILLRESQGVRPPAPQ*PAVPSP
Trigger: TGGGCTCGGTACGGCAGGCCATTGAGGAGCTGGAGG...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAGCTTGCTGCTGGGAGTaGAGCGCAGCCTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRACCWE*SAASSG
Trigger: TCCTGATGAGGCTGCGCTCCACTCCCAGCAGCAAGC...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGAGCCGCAGGGCCCGATaGAGGCCACTCTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLSRRAR*RPLSTC
Trigger: GCAGGTTGAGAGTGGCCTCCATCGGGCCCTGCGGCT...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACTCGAAGAGAAAGACATaGCGAAGGCACTTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: SGEVACRVYASRARRRRNSKRKT*RRHFFR
Trigger: CCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGA...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGTGTCTCCACAGCAGCTaGGCAATAGAACTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: IAQGSIMPHCHPSPKCAECLHSS*AIELVH
Trigger: GTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA...CTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGTCCCCAGGCATAGCTGTTTCTTGGTCCTaGGGACACATCTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: ARNRSSVSCRADKVSPGIAVSWS*GHISRR
Trigger: TCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGC...TATGCCTGGGGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGCTGCACGCAAGTTCTaGATCTTCTCCAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: LSAESTESQLCLLQGRQGAARKF*IFSRSQ
Trigger: CTGTGACCTGGAGAAGATCCAGAACTTGCGTGCAGC...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGGCAGGGCAATACTCTaGTCGTTAGACCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LQSVCLSCTPPPKPQLKAGRAIL*SLDLLC
Trigger: ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCC...TGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTATGTCCTGGATACAGTaGCCCAGGATGGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: LSAESTESQLCLLQGRQGMSWIQ*PRMGKH
Trigger: GTGCTTTCCCATCCTGGGCCACTGTATCCAGGACAT...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCCTTGCTTAAGGGACTGAGCGCAGCCAGACCATTCTCCAGTTTGTGTCGGTGCGCTGATGTCCAACCATaGGGCCCTCTTTGTGCACAA +
Preference number: 4 (lower is better)
Translates to: PLLKGLSAARPFSSLCRCADVQP*GPLCAQ
Trigger: TTGTGCACAAAGAGGGCCTCATGGTTGGACATCAGC...GCACCGACACAAACTGGAGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAGGCAGTGTACTTGGCTaGTGTCCAACCATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRGSVLG*CPTMRP
Trigger: GGGCCTCATGGTTGGACATCAGCCAAGTACACTGCC...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp TCGGTGCTTCACGTACTGTGCATAAAGGCTGAACTGGTCCCCGTGGCGAAGGAAGGATCTCCTGAGTCCTaGAGTTGGCTCAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SVLHVLCIKAELVPVAKEGSPES*SWLKAG
Trigger: TCCTGCCTTGAGCCAACTTCAGGACTCAGGAGATCC...TTCCTTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGTACGTGAAGCACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS-3UTR TCA 90 bp CCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAAGAAGGTTGGAAGGTCATCATaGATGAGAATCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PASRAKPSSTHSCACWKKVGRSS*MRISSR
Trigger: GCGGCTGCTGATTCTCATTCATGATGACCTTCCAAC...CTTCTTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGGGAGAGGGGTCCCTGTaGCCTCCTAACTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKEGEGSL*PPNSHC
Trigger: GCAGTGGGAGTTAGGAGGTCACAGGGACCCCTCTCC...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTTGTATCTCTACCCAGTaGCTGGGAGAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSCISTQ*LGEGSL
Trigger: CAGGGACCCCTCTCCCAGTCACTGGGTAGAGATACA...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTGCCTCGTCCACTTCCTaGTACAGTGTAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSASSTS*YSVAGP
Trigger: AGGCCCAGCTACACTGTATCAGGAAGTGGACGAGGC...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGGGCTGGCATGGGAGTaGTGTCCTGGATACAGTGGC +
Preference number: 4 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCGLAWE*CPGYSG
Trigger: GCCACTGTATCCAGGACATCACTCCCATGCCAGCCC...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GCAGTGTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTTCACGCACTGTGGCCTaGGGACCTCATTTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: AVWEKELQRVCGTSGSHCSRTVA*GPHFEN
Trigger: GTTCTCAAAATGAGGTCCTCAGGCCACAGTGCGTGA...ACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAGCCAGGCCGTCAGGATaGGGAATCCAGATGCCATCA +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRARPSG*GIQMPS
Trigger: TGATGGCATCTGGATTCCTCATCCTGACGGCCTGGC...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS-3UTR GCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAGGTAGGGCTGCTAGCTaGACCACCACCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRGRAAS*TTTCSC
Trigger: GCATGAACAGGTGGTGGTGCAGCTAGCAGCCCTACC...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCCACAGAGTTCAGTTGGAAGGTCATCATGAATGAGAATCAGCAGCCGCTGAACCCCAGGCCCTTCTGGTaGATCCACGCCCGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: STEFSWKVIMNENQQPLNPRPFW*IHARCL
Trigger: GAGACACCGGGCGTGGATGCACCAGAAGGGCCTGGG...GTTCAGCGGCTGCTGATTCTCATTCATGATGACCTTCCAACTGAACTCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACTTCTCCCACAGCCTCTaGTGGGGGCTCAGACACCTC +
Preference number: 4 (lower is better)
Translates to: QARETRDSGGRAILWSLDFSHSL*WGLRHL
Trigger: GAGGTGTCTGAGCCCCCAGCAGAGGCTGTGGGAGAA...GTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTTTCTTCTGTTTCCTTTaGCTGTTCTCCGAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCFFCFL*LFSEGY
Trigger: GTACCCCTCGGAGAACAGGCAAAGGAAACAGAAGAA...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCTGCTGAAGAGCCCCTCGACCTaGAGCTCGCTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GGHVILFTGNQLRHQPLLKSPST*SSLLSS
Trigger: AGAAGAAAGAAGCGAGCTGCAGGTCGAGGGGCTCTT...CAGCAGCGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGCCCCTTGGTGAGGGCAGATTaGCAAGGGCTTCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RNHNSKQSPLSPMFSVSPLVRAD*QGLLGG
Trigger: GCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAA...GGGGCTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCCAAGGCAGGAATGAGTaGTGGAGGCAGTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFQGRNE*WRQWRC
Trigger: GCACCTCCACTGCCTCCAGCACTCATTCCTGCCTTG...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCAAGGCAGGAATGAGTaGTGGAGGCAGTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TQGGHVILFTGNQLRHQPQGRNE*WRQWRC
Trigger: GCACCTCCACTGCCTCCAGCACTCATTCCTGCCTTG...CGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTCCTCCTAACTCCCACTaGAGCTCCTCTGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCPPNSH*SSSGLA
Trigger: GGCCAAGCCAGAGGAGCTGCAGTGGGAGTTAGGAGG...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGTCTGCCAGCACCTTCTaGAGTGGCTTGGGCATTCCC +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQSASTF*SGLGIP
Trigger: GGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGA...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCGCTGCTCTTGCTGCTaGACGTGCAGGTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QARETRDSGGRAILWSLDRCSCC*TCRLER
Trigger: CCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCG...GTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TCCACAGAGTTCAGTTGGAAGGTCATCATGAATGAGAATCAGCAGCCGCTGAACGCATCTCCTGGAAGGTaGCGGCACTGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: STEFSWKVIMNENQQPLNASPGR*RHWALG
Trigger: CCCCAGAGCCCAGTGCCGGCACCTTCCAGGAGATGC...GTTCAGCGGCTGCTGATTCTCATTCATGATGACCTTCCAACTGAACTCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGGTGAAGGGGTCTCGATaGAAGAGCTGTCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWVKGSR*KSCPCS
Trigger: GGAGCAGGGACAGCTCTTGCATCGAGACCCCTTCAC...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGTGCCTGCAGAGTGTATaGCTCTCGTGCACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAECLQSV*LSCTPP
Trigger: CGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCA...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTCTGGTGAGGTTGCCTaGAGAGTGTATGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHSGEVA*RVYASR
Trigger: ACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGGGCAAGCAATGTGGCTaGTCTGACTCCTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQGKQCG*SDSCRR
Trigger: TCTCCTGCAGGAGTCAGAGCAGCCACATTGCTTGCC...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGACCACCTGGAACACCTaGCCCAACAGGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKETTWNT*PNRVGA
Trigger: AGCCCCCACCCTGTTGGGCCAGGTGTTCCAGGTGGT...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCACCTGGAACACCTaGCCCAACAGGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLTTWNT*PNRVGA
Trigger: AGCCCCCACCCTGTTGGGCCAGGTGTTCCAGGTGGT...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCGGTGCTTCACGTACTGTGCATAAAGGCTGAACTGGTCCCCGTGGCGAAGGAATGGCAAGCAGGTGCTTaGCTGGTACCAGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SVLHVLCIKAELVPVAKEWQAGA*LVPGSP
Trigger: TGGACTTCCTGGTACCAGCCAAGCACCTGCTTGCCA...TTCCTTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGTACGTGAAGCACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGACTGAGGCGACCTGTTaGCCGGTCCTTGTTGATGCC +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWTEATC*PVLVDA
Trigger: GGCATCAACAAGGACCGGCCAACAGGTCGCCTCAGT...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGACTGAGGCGACCTGTTaGCCGGTCCTTGTTGATGCC +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQTEATC*PVLVDA
Trigger: GGCATCAACAAGGACCGGCCAACAGGTCGCCTCAGT...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTTTTGTGCACAAATCGTaGACAGATGAGCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCFVHKS*TDELSP
Trigger: TGGGCTGAGCTCATCTGTCCACGATTTGTGCACAAA...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GCAGTGTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTTGGGGGCAGTGTACTTaGCTGATGTCCAACCATGAG +
Preference number: 4 (lower is better)
Translates to: AVWEKELQRVCGTSGSHCWGQCT*LMSNHE
Trigger: CTCATGGTTGGACATCAGCCAAGTACACTGCCCCCA...ACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCACACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp ACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGGACTCTGGAGAGGCCTaGGGAGCCTTCAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: TQGGHVILFTGNQLRHQPDSGEA*GAFSIC
Trigger: ACAGATGCTGAAGGCTCCCCAGGCCTCTCCAGAGTC...CGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCCAATAAACAGGTGGACAGCCTCAGCTCCTaGGGGAGACTCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LVRFLSSLLQSRVPNKQVDSLSS*GRLRGG
Trigger: GCCTCCCCTGAGTCTCCCCCAGGAGCTGAGGCTGTC...CACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp TGTCTCCACAGCAGCTGGGCAATAGAACTTGTCCACTTGAGTTTGATCTCTGGTGACAGCCTCAGCTCCTaGGGGAGACTCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: CLHSSWAIELVHLSLISGDSLSS*GRLRGG
Trigger: GCCTCCCCTGAGTCTCCCCCAGGAGCTGAGGCTGTC...ACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTAACCAGGTGGCATTCTaGAAGCTTGTGCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: LSAESTESQLCLLQGRQGNQVAF*KLVLTW
Trigger: CCAAGTGAGCACAAGCTTCCAGAATGCCACCTGGTT...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR CCA 90 bp CTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTTGCAAGGGCCTCTTCTaGAATGTTGTCCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LSAESTESQLCLLQGRQGCKGLF*NVVPFS
Trigger: GGAAAAGGGGACAACATTCCAGAAGAGGCCCTTGCA...ACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AACAGGAGGAGATGCTCGAAGAGAAAGACATGGCGAAGGCACTTCTTTCGGCCACTCAGGAGGGCACGGTaGGGTAATGGTCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: NRRRCSKRKTWRRHFFRPLRRAR*GNGQQS
Trigger: GCTCTGCTGACCATTACCCCACCGTGCCCTCCTGAG...TGGCCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGCCCCCATTCATGTGCCTGCTaGAAGAAGCGCTGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: RNHNSKQSPLSPMFSVSPHSCAC*KKRCSR
Trigger: GCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATG...GGGGCTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp TGTCTCCACAGCAGCTGGGCAATAGAACTTGTCCACTTGAGTTTGATCTCTGGTGGGTGCTTGGGCAGCTaGGGGCACCACCTGCAGATA +
Preference number: 4 (lower is better)
Translates to: CLHSSWAIELVHLSLISGGCLGS*GHHLQI
Trigger: TATCTGCAGGTGGTGCCCTCAGCTGCCCAAGCACCC...ACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGGTAGCCACTCAGGTGTaGATAGGTAGGCACAAGCCT +
Preference number: 4 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQVATQV*IGRHKP
Trigger: AGGCTTGTGCCTACCTATTCACACCTGAGTGGCTAC...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGACAGTAGGCAGGTACTaGGGCGACCTGTTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKETVGRY*GDLLAG
Trigger: ACCGGCCAACAGGTCGCCTCAGTACCTGCCTACTGT...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTCTTGTGCTCACTTGGTaGGGGCAGATTGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCLVLTW*GQIAKG
Trigger: GCCCTTGGCAATCTGCCCTCACCAAGTGAGCACAAG...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR TCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGACTGTGCATAAAGGCTaGACTGGTCCCCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWTVHKG*TGPRGE
Trigger: TTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGT...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCCCACCTCCAGGGTATaGAGGCAAGCAATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QARETRDSGGRAILWSLDPTSRV*RQAMWL
Trigger: CAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGG...GTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGACAGCGTGTACCTCAGTaGGTCCTCCCGATAAGTCCT +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRQRVPQ*VLPISP
Trigger: AGGACTTATCGGGAGGACGCACTGAGGTACACGCTG...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGTCCCTCCAGCGCCCTTaGGGGTGGGTACCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLSLQRP*GWVPSG
Trigger: TCCGGACGGTACCCACCCGCAAGGGCGCTGGAGGGA...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACATCAGAGACGGAGACTaGAAGGGCCTCTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHIRDGD*KGLFWN
Trigger: ATTCCAGAAGAGGCCCTTGCAGTCTCCGTCTCTGAT...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGCGCTGCTCTTGCTGCTaGACGTGCAGGTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLRCSCC*TCRLER
Trigger: CCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCG...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCTCCTATTGTTTGCATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGTCGCCGCAGGCACTaGCGCTGCTCTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PPIVCIASLLVTPQNGVTSRRRH*RCSCCC
Trigger: GCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACT...GGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAGGCATAGCAAAGCTTaGCAGCTGCTCCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPVDLAEMILLRESQGVRRHSKA*QLLLPW
Trigger: CCAGGGGAGGAGCAGCTGGCAAGCTTTGCTATGCCT...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGCGCAGCTCTGTCTCCTaGAGGGCAGACAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLRSSVS*RADKVS
Trigger: GGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCG...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGATCCTCTCCCACGTGTTaGTGGATCCTCCTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRSSPTC*WILLSS
Trigger: GCTAGAGAGGAGGATCCAGCAACACGTGGGAGAGGA...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCCTCTCCCACGTGTTaGTGGATCCTCCTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWSSPTC*WILLSS
Trigger: GCTAGAGAGGAGGATCCAGCAACACGTGGGAGAGGA...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACAGAACTGCTGGACTGTaGTGGATCCCAGTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHRTAGL*WIPVCL
Trigger: CAGACAAACTGGGATCCAGCACAGTCCAGCAGTTCT...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGTCCTCTAAGCTCCCCTaGCCTCAGGGGGCAAGATCC +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKESSKLP*PQGARS
Trigger: GGATCTTGCCCCCTGAGGCCAGGGGAGCTTAGAGGA...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCCAAGGGCTTCTTGGTaGCTGGCATCTTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TQGGHVILFTGNQLRHQPPRASW*LASSLS
Trigger: GGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGG...CGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTCCTCCTTAACCAGGTaGCATTCTGGAAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHSSLTR*HSGSLC
Trigger: GCACAAGCTTCCAGAATGCCACCTGGTTAAGGAGGA...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR CCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTCTGATACAGTGTAGCTaGGCCTTGGCCCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSLIQCS*ALALQL
Trigger: AAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAG...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTCATTCATGTGCCTGCTaGAAGAAGCGCTGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSHSCAC*KKRCSR
Trigger: GCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATG...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGTGCGTAGGGGGTGGGTaGCGCAGCCCTGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRCVGGG*RSPEAP
Trigger: GGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCA...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp TGTCTCCACAGCAGCTGGGCAATAGAACTTGTCCACTTGAGTTTGATCTCTGGTGCTGCCAGGGAGGGCTaGCATGGGAGTGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: CLHSSWAIELVHLSLISGAAREG*HGSDVL
Trigger: CAGGACATCACTCCCATGCCAGCCCTCCCTGGCAGC...ACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCATTTTGAGAACTGCTaGACTGTGCTGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQHFENC*TVLDPS
Trigger: ACTGGGATCCAGCACAGTCCAGCAGTTCTCAAAATG...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp CCCTTGCTTAAGGGACTGAGCGCAGCCAGACCATTCTCCAGTTTGTGTCGGTGCAGAGTCAAGTGTTTCTaGGGCTCTTCCAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PLLKGLSAARPFSSLCRCRVKCF*GSSSEQ
Trigger: CTGCTCACTGGAAGAGCCCCAGAAACACTTGACTCT...GCACCGACACAAACTGGAGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS-3UTR TCA 90 bp CCTCCTATTGTTTGCATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCGGGTGCTTGGGCAGCTaGGGGCACCACCTGCAGATA +
Preference number: 4 (lower is better)
Translates to: PPIVCIASLLVTPQNGVTGCLGS*GHHLQI
Trigger: TATCTGCAGGTGGTGCCCTCAGCTGCCCAAGCACCC...GGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GCAGTGTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTTCTCGCCTGCTGTTTTaGGCTCTTTTGGCTCAGATT +
Preference number: 4 (lower is better)
Translates to: AVWEKELQRVCGTSGSHCSRLLF*ALLAQI
Trigger: AATCTGAGCCAAAAGAGCTCAAAACAGCAGGCGAGA...ACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGCAGGCTTCAGAGAGCTaGGGCTCTTTCTCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLQASES*GSFSPA
Trigger: AGCAGGCGAGAAAGAGCCTCAGCTCTCTGAAGCCTG...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR TCA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGTCTGTAGATCAGGCCTaGGCAGTGAGTGGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQSVDQA*AVSGGN
Trigger: ATTACCTCCACTCACTGCTCAGGCCTGATCTACAGA...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGACCAGGGAAATTTGCTTaGCGTCCAGATCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TPVDLAEMILLRESQGVRPGKFA*RPDPRP
Trigger: AGGCCTGGGATCTGGACGTCAAGCAAATTTCCCTGG...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR TCA 90 bp TGTCTCCACAGCAGCTGGGCAATAGAACTTGTCCACTTGAGTTTGATCTCTGGTCTCAGGGCTCGAGCATaGCTCTGTCGGGATAGCCCT +
Preference number: 4 (lower is better)
Translates to: CLHSSWAIELVHLSLISGLRARA*LCRDSP
Trigger: AGGGCTATCCCGACAGAGTCATGCTCGAGCCCTGAG...ACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCCAGCCCAAAGTGTGCTaGGAGGAGAAGCTGCACGCA +
Preference number: 4 (lower is better)
Translates to: DVAIFGTIPVIPIAESCPQPKVC*EEKLHA
Trigger: TGCGTGCAGCTTCTCCTCTCAGCACACTTTGGGCTG...GGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGCCTGGGCGCAGCAGTTaGCAGGGTAGGGCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLPGRSS*QGRAAS
Trigger: GCTAGCAGCCCTACCCTGGCAACTGCTGCGCCCAGG...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCCCTCCAGCGCCCTTaGGGGTGGGTACCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIASLQRP*GWVPSG
Trigger: TCCGGACGGTACCCACCCGCAAGGGCGCTGGAGGGA...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TGTCTCCACAGCAGCTGGGCAATAGAACTTGTCCACTTGAGTTTGATCTCTGGTTTCTCCCACAGCCTCTaGTGGGGGCTCAGACACCTC +
Preference number: 4 (lower is better)
Translates to: CLHSSWAIELVHLSLISGFSHSL*WGLRHL
Trigger: GAGGTGTCTGAGCCCCCAGCAGAGGCTGTGGGAGAA...ACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGCTTGGGCATTCCCACTaGCTCCTCTTCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAELGHSH*LLFLWL
Trigger: GAGCCAGAGGAAGAGGAGGCAGTGGGAATGCCCAAG...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGTCTGCCAGCACCTTCTaGAGTGGCTTGGGCATTCCC +
Preference number: 4 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLSASTF*SGLGIP
Trigger: GGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGA...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAATCCACCCATTCATGTaGCTGCTGGAAGAAGCGCTG +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRIHPFM*LLEEAL
Trigger: CAGCGCTTCTTCCAGCAGGCACATGAATGGGTGGAT...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCAACTGCTGGCACCGTCTaGCCGCCGTCGTCGGTAGCC +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASTAGTV*PPSSVA
Trigger: GGCTACCGACGACGGCGGGCAGACGGTGCCAGCAGT...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGTGGGGGCCTGCCCTCTaGTTCTGGAGCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLWGPAL*FWSQLR
Trigger: CCTGAGCTGGCTCCAGAAGCAGAGGGCAGGCCCCCA...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGGTGAAGGGGTCTCGATaGAAGAGCTGTCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKEVKGSR*KSCPCS
Trigger: GGAGCAGGGACAGCTCTTGCATCGAGACCCCTTCAC...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCCTGAACAGGAGGAGATaGTCGAAGAGAAAGACATGG +
Preference number: 4 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCLNRRR*SKRKTW
Trigger: CCATGTCTTTCTCTTCGAGCATCTCCTCCTGTTCAG...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp TTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCCAATAAACAGGTGAGTGTATGCCTCTCGTaGACGCCGCCGCCGAAACCA +
Preference number: 4 (lower is better)
Translates to: LVRFLSSLLQSRVPNKQVSVCLS*TPPPKP
Trigger: TGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACT...CACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGCTCCTTGTTGTGGGCTaGCTGTCTCCACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKELLVVG*LSPQQL
Trigger: CAGCTGCTGTGGAGACAGGCAGCCCACAACAAGGAG...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGTCCATTATGCCCCACTaGCATCCCAGCCCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQSIMPH*HPSPKC
Trigger: ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGA...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGGCCCTGTGTCTGTCTaGCTACCTATGTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCGPVSV*LPMSCF
Trigger: GAAGCAGGACATAGGTAGGCAGACAGACACAGGGCC...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp GCAGTGTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTTCCTGTCATCCCTATTaGAGAGTCGTGTCCCCAATA +
Preference number: 4 (lower is better)
Translates to: AVWEKELQRVCGTSGSHCSCHPY*RVVSPI
Trigger: TATTGGGGACACGACTCTGCAATAGGGATGACAGGA...ACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp CCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAATTCCACAGAGTTCAGTTaGAAGGTCATCATGAATGAG +
Preference number: 4 (lower is better)
Translates to: PLLLLLHVQVGEAHKLVNSTEFS*KVIMNE
Trigger: CTCATTCATGATGACCTTCCAACTGAACTCTGTGGA...ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGGCTGGGGCTGTTTCTTaGTCCTGGGGACACATCTCC +
Preference number: 4 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAEAGAVS*SWGHIS
Trigger: GGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp GACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCTACAGTGGCCCAGGATaGGAAAGCACCGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: DVAIFGTIPVIPIAESCPYSGPG*ESTGRG
Trigger: CCCTCTTCCGGTGCTTTCCCATCCTGGGCCACTGTA...GGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp AGGCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTGTGACACCTCAGAATaGAGTCACCAGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: RLGLFLGPGDTSPEESSVCDTSE*SHQGLQ
Trigger: CTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACA...AACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTTGTGACACCTCAGAATaGAGTCACCAGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSCDTSE*SHQGLQ
Trigger: CTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACA...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR CAA 72 bp GCAAGTTCTCACGCACTGTGGCCTGAGGACCTCATTTaGAGAACTGCTGGACTGTGCTGGATCCCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: ASSHALWPEDLI*RTAGLCWIPVC
Trigger: ACAAACTGGGATCCAGCACAGTCCAGCAGTTCTCAAAATGAGGTCCTCAGGCCACAGTGCGTGAGAACTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGTTGGCCGGTCCTTGTTaGTGCCTTGTAGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAELAGPC*CLVATQ
Trigger: CTGAGTGGCTACAAGGCATCAACAAGGACCGGCCAA...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGAGAATCAGCAGCCGCTaGACAAGGGGAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLRISSR*TRGGSP
Trigger: AGGAGATCCTCCCCTTGTTCAGCGGCTGCTGATTCT...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp ACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGGTTGGAAGGTCATCATaGATGAGAATCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TQGGHVILFTGNQLRHQPVGRSS*MRISSR
Trigger: GCGGCTGCTGATTCTCATTCATGATGACCTTCCAAC...CGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTTTCAGATCATTCTCTaGCAGCACCTCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWFQIIL*QHLSTL
Trigger: CAGGGTGCTGAGGTGCTGTCAGAGAATGATCTGAAA...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGACTGTGCATAAAGGCTaGACTGGTCCCCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKETVHKG*TGPRGE
Trigger: TTCGCCACGGGGACCAGTTCAGCCTTTATGCACAGT...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGGCGGCGAGAGTGCTCTaGACACAGTCCTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRAARVL*TQSSTG
Trigger: GCCAGTGGAGGACTGTGTGCAGAGCACTCTCGCCGC...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGACCACCACCTGTTCATaGAGGCAGAGCGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLTTTCS*RQSGHP
Trigger: GGGGTGGCCGCTCTGCCTGCATGAACAGGTGGTGGT...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGATGAGGCCCTCTTTGTaGACAAATCGTGGACAGATG +
Preference number: 4 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQMRPSL*TNRGQM
Trigger: CATCTGTCCACGATTTGTGCACAAAGAGGGCCTCAT...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TGGCGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCTCGATGCAAGTTCTTCTGTTTCCTTTaGCTGTTCTCCGAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: WRRHFFRPQMTVKGSRCKFFCFL*LFSEGY
Trigger: GTACCCCTCGGAGAACAGGCAAAGGAAACAGAAGAA...CTTGCATCGAGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCTTGGTGAGGGCAGATTaGCAAGGGCTTCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: DVAIFGTIPVIPIAESCPLVRAD*QGLLGG
Trigger: GCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAA...GGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGTTGGTGAGGGCAGATTaGCAAGGGCTTCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKELVRAD*QGLLGG
Trigger: GCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAA...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTCATTCTGGAAGCTTGTaGTCACTTGGTGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSHSGSL*SLGEGR
Trigger: TCTGCCCTCACCAAGTGAGCACAAGCTTCCAGAATG...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR GCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGATCAGAGACGGAGACTaGAAGGGCCTCTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWIRDGD*KGLFWN
Trigger: ATTCCAGAAGAGGCCCTTGCAGTCTCCGTCTCTGAT...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TGGCGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCTCGATGCAAGGATGAGGAATCCAGATaGCATCAAGTCCCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: WRRHFFRPQMTVKGSRCKDEESR*HQVPSY
Trigger: GTAGCTTGGGACTTGATGGCATCTGGATTCCTCATC...CTTGCATCGAGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCAAGTCGCCGCAGGCACTaGCGCTGCTCTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASSRRRH*RCSCCC
Trigger: GCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGACT...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGAGCCACTGCAACACCTaGTGGAGTCGCCGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRSHCNT*WSRRRH
Trigger: GTGCCTGCGGCGACTCCAGCAGGTGTTGCAGTGGCT...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGGTGTCCGGTGGAAGCTaGGAAGCCTTTCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRVSGGS*EAFPGH
Trigger: GTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTTCCATTATGCCCCACTaGCATCCCAGCCCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCSIMPH*HPSPKC
Trigger: ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGA...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCCAATAAACAGGTGGGCTGCTCTGACTCCTaGAGGAGAAGGCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: LVRFLSSLLQSRVPNKQVGCSDS*RRRHQA
Trigger: AGCTTGGTGCCTTCTCCTGCAGGAGTCAGAGCAGCC...CACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGGGCAAGCAATGTGGCTaGTCTGACTCCTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKEGKQCG*SDSCRR
Trigger: TCTCCTGCAGGAGTCAGAGCAGCCACATTGCTTGCC...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGCTCCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAACACCCTCCTATTGTTTaGATAGCTTCATTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SSCQPSKALIHPFMCLLEHPPIV*IASLLV
Trigger: CACAAGCAATGAAGCTATGCAAACAATAGGAGGGTG...TTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGAAGCAGGTGCTTGGCTaGTACCAGGAAGTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAEKQVLG*YQEVQR
Trigger: ACGCTGGACTTCCTGGTACCAGCCAAGCACCTGCTT...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGAAGCAGGTGCTTGGCTaGTACCAGGAAGTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLKQVLG*YQEVQR
Trigger: ACGCTGGACTTCCTGGTACCAGCCAAGCACCTGCTT...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGCCACTGCAGCTCCTCTaGCTTGGCCACTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAEPLQLL*LGHSFQ
Trigger: CTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCAGTGG...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp CCTCCTATTGTTTGCATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCGCTGCACGTGCAGGTTaGAGAGGCGCACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PPIVCIASLLVTPQNGVTAARAG*RGAQAG
Trigger: ACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGC...GGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGCACTGCAACACCTGCTaGAGTCGCCGCAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLHCNTC*SRRRHC
Trigger: GCAGTGCCTGCGGCGACTCCAGCAGGTGTTGCAGTG...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGTGGGCCAGGCGCTCCTaGACCTCAGCGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLWARRS*TSALKA
Trigger: TGCTTTCAGCGCTGAGGTCCAGGAGCGCCTGGCCCA...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATGGGCCCCTCCACTGCTaGCACCGTCTGCCCGCCGTC +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYGPLHC*HRLPAV
Trigger: GACGGCGGGCAGACGGTGCCAGCAGTGGAGGGGCCC...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACAGAAAGTGTGTCCGGTaGAAGCTGCGAAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QARETRDSGGRAILWSLDRKCVR*KLRSLS
Trigger: GGAAAGGCTTCGCAGCTTCCACCGGACACACTTTCT...GTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTGTCTCCACAGCAGCTaGGCAATAGAACTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RRHQARETRDSGGRAILWCLHSS*AIELVH
Trigger: GTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGTATTCCCAATGCCCATaGACACCATCTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: TQGGHVILFTGNQLRHQPYSQCP*TPSAAL
Trigger: GAGTGCAGCAGATGGTGTCCATGGGCATTGGGAATA...CGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAGCTGTTTCTTGGTCCTaGGGACACATCTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRAVSWS*GHISRR
Trigger: TCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGC...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp CCTCCTATTGTTTGCATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCCTAAGATCCCTCGACTaGCCAGGGTGGGAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PPIVCIASLLVTPQNGVTLRSLD*PGWECC
Trigger: GCAGCACTCCCACCCTGGCCAGTCGAGGGATCTTAG...GGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGGCAGGGCAATACTCTaGTCGTTAGACCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCGRAIL*SLDLLC
Trigger: ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCC...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAATGTCCTGGATACAGTaGCCCAGGATGGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TPVDLAEMILLRESQGVRMSWIQ*PRMGKH
Trigger: GTGCTTTCCCATCCTGGGCCACTGTATCCAGGACAT...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGAGTGTGTGGAACCTCTaGGAGCCACTGTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAESVWNL*EPLWRR
Trigger: TCTCCTCCACAGTGGCTCCCAGAGGTTCCACACACT...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGCAGGGGCCAGACACTTaGGTGCTAGTCGGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLQGPDT*VLVGVL
Trigger: AAGCACCCCGACTAGCACTCAAGTGTCTGGCCCCTG...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGTCTCGCCTGCTGTTTTaGGCTCTTTTGGCTCAGATT +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQSRLLF*ALLAQI
Trigger: AATCTGAGCCAAAAGAGCTCAAAACAGCAGGCGAGA...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR TCA 90 bp CAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACGTTGGAAGGTCATCATaGATGAGAATCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QARETRDSGGRAILWSLDVGRSS*MRISSR
Trigger: GCGGCTGCTGATTCTCATTCATGATGACCTTCCAAC...GTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGCTCAGGGCTCGAGCATaGCTCTGTCGGGATAGCCCT +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLLRARA*LCRDSP
Trigger: AGGGCTATCCCGACAGAGTCATGCTCGAGCCCTGAG...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGAATAAACAGGTGTCTTaGGGCACAGGGCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKENKQVS*GTGPCV
Trigger: GACACAGGGCCCTGTGCCTCAAGACACCTGTTTATT...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTACCACCACCTGTTCATaGAGGCAGAGCGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIATTTCS*RQSGHP
Trigger: GGGGTGGCCGCTCTGCCTGCATGAACAGGTGGTGGT...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGACCTGGCAGTTCTTCTGTTTCCTTTaGCTGTTCTCCGAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: IACDTSEWSHQGLQLTWQFFCFL*LFSEGY
Trigger: GTACCCCTCGGAGAACAGGCAAAGGAAACAGAAGAA...CTGCCAGGTCAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGAAGAGCCCCTCGACCTaGAGCTCGCTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKEKSPST*SSLLSS
Trigger: AGAAGAAAGAAGCGAGCTGCAGGTCGAGGGGCTCTT...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCTCCTATTGTTTGCATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCTCTTGCTGCTGCACGTaGAGGTTGGAGAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: PPIVCIASLLVTPQNGVTSCCCT*RLERRT
Trigger: TGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGA...GGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAGTGCTTCACGTACTGTaGATAAAGGCTGAACTGGTC +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRVLHVL*IKAELV
Trigger: GACCAGTTCAGCCTTTATGCACAGTACGTGAAGCAC...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCTGCAAGAGCTGTCCCTaGTCCTTCAGATCTATCTCA +
Preference number: 4 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFCKSCP*SFRSIS
Trigger: TGAGATAGATCTGAAGGAGCAGGGACAGCTCTTGCA...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGAAGGGTTTATTCCCAATaGCCATGGACACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRRVYSQ*PWTPSA
Trigger: AGCAGATGGTGTCCATGGGCATTGGGAATAAACCCT...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTAGGGTTTATTCCCAATaGCCATGGACACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSRVYSQ*PWTPSA
Trigger: AGCAGATGGTGTCCATGGGCATTGGGAATAAACCCT...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCCAATAAACAGGTGTGTTGCCTCAAAGGGTaGATACAGGGCGGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: LVRFLSSLLQSRVPNKQVCCLKG*IQGGES
Trigger: ACTCTCGCCGCCCTGTATCCACCCTTTGAGGCAACA...CACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp TCCACAGAGTTCAGTTGGAAGGTCATCATGAATGAGAATCAGCAGCCGCTGAACTGGCAAGCAGGTGCTTaGCTGGTACCAGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: STEFSWKVIMNENQQPLNWQAGA*LVPGSP
Trigger: TGGACTTCCTGGTACCAGCCAAGCACCTGCTTGCCA...GTTCAGCGGCTGCTGATTCTCATTCATGATGACCTTCCAACTGAACTCTGTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGTTGCCAAGGGCTTCTTaGTGGCTGGCATCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: VDLAEMILLRESQGVRKELPRAS*WLASSL
Trigger: CAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAA...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAACCAGGTGGCATTCTaGAAGCTTGTGCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: TPVDLAEMILLRESQGVRNQVAF*KLVLTW
Trigger: CCAAGTGAGCACAAGCTTCCAGAATGCCACCTGGTT...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR CCA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGGAGTGCTGGAGGCAGTaGAGGTGCCTGACGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRECWRQ*RCLTKV
Trigger: GACCTTCGTCAGGCACCTCCACTGCCTCCAGCACTC...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp TTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCCAATAAACAGGTGCTGATACAGTGTAGCTaGGCCTTGGCCCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LVRFLSSLLQSRVPNKQVLIQCS*ALALQL
Trigger: AAGCTGGAGGGCCAAGGCCCAGCTACACTGTATCAG...CACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp TTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCCAATAAACAGGTGCATTCATGTGCCTGCTaGAAGAAGCGCTGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: LVRFLSSLLQSRVPNKQVHSCAC*KKRCSR
Trigger: GCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATG...CACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp CAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTGGCTCACTCAAGGTaGCCACGTAATCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: QARETRDSGGRAILWSLDLAHSR*PRNLVH
Trigger: GTGAACAAGATTACGTGGCCACCTTGAGTGAGCCAG...GTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR CAA 72 bp CATTTTGAGAACTGCTGGACTGTGCTGGATCCCAGTTaGTCTGTGACCAGTTCAGCCTCAAGGAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: HFENCWTVLDPS*SVTSSASRSRC
Trigger: GCACCTACTCCTTGAGGCTGAACTGGTCACAGACAAACTGGGATCCAGCACAGTCCAGCAGTTCTCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR CAA 72 bp CACAGCAGCTGGGCAATAGAACTTGTCCACTTGAGTTaGATCTCTGGTGAGGTTGCCTGCAGAGTGTATGCC +
Preference number: 4 (lower is better)
Translates to: HSSWAIELVHLS*ISGEVACRVYA
Trigger: GGCATACACTCTGCAGGCAACCTCACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp GACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCTCTGTAGATCAGGCCTaGGCAGTGAGTGGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: DVAIFGTIPVIPIAESCPSVDQA*AVSGGN
Trigger: ATTACCTCCACTCACTGCTCAGGCCTGATCTACAGA...GGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTGGCTCAAGGCAGGAATaGGTGCTGGAGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAGSRQE*VLEAVE
Trigger: CTCCACTGCCTCCAGCACTCATTCCTGCCTTGAGCC...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGTTTCAGATCATTCTCTaGCAGCACCTCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLFQIIL*QHLSTL
Trigger: CAGGGTGCTGAGGTGCTGTCAGAGAATGATCTGAAA...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTCCTGGACCTCAGCGCTaGAAGCACGGAATCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAPGPQR*KHGIAA
Trigger: AGCTGCGATTCCGTGCTTTCAGCGCTGAGGTCCAGG...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCAGGGCTGGCATGGGAGTaGTGTCCTGGATACAGTGGC +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASGLAWE*CPGYSG
Trigger: GCCACTGTATCCAGGACATCACTCCCATGCCAGCCC...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGCTGGTCCACCCCTCCTaGAGACACAAAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLLVHPS*RHKMAR
Trigger: CCTGGCCATTTTGTGTCTTCAGGAGGGGTGGACCAG...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS-3UTR GCA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGATGAGGAATCCAGATaGCATCAAGTCCCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCDEESR*HQVPSY
Trigger: GTAGCTTGGGACTTGATGGCATCTGGATTCCTCATC...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp CCTCCTATTGTTTGCATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCTTCCTCTGGCTCTGCTaGTCCCTCCAGCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: PPIVCIASLLVTPQNGVTFLWLC*SLQLLN
Trigger: ATTGAGGAGCTGGAGGGAGCAGCAGAGCCAGAGGAA...GGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCGGCCCTCCAGCTTGCTaGTGGGAGTGGAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSGPPAC*WEWSAA
Trigger: GGCTGCGCTCCACTCCCAGCAGCAAGCTGGAGGGCC...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCACGCAGCTCTGTCTCCTaGAGGGCAGACAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASRSSVS*RADKVS
Trigger: GGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCG...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAGGGTTTATTCCCAATaGCCATGGACACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: TPVDLAEMILLRESQGVRRVYSQ*PWTPSA
Trigger: AGCAGATGGTGTCCATGGGCATTGGGAATAAACCCT...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTGCACAGGCTTCCTGCTaGACCTTGGCAAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAAQASC*TLASRC
Trigger: GCACCTGCTTGCCAAGGTCCAGCAGGAAGCCTGTGC...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGCAGATAGAAGTCTCCTaGGCGCAGCAGTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRQIEVS*AQQLPG
Trigger: CCCTGGCAACTGCTGCGCCCAGGAGACTTCTATCTG...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATCAGCGCCCTTGCGGGTaGGTACCGTCCGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYQRPCG*VPSGLW
Trigger: CCAGAGTCCGGACGGTACCCACCCGCAAGGGCGCTG...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGTGCAAGGGCCTCTTCTaGAATGTTGTCCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAECKGLF*NVVPFS
Trigger: GGAAAAGGGGACAACATTCCAGAAGAGGCCCTTGCA...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGCAGCACCTTCTGCAGTaGCTTGGGCATTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRQHLLQ*LGHSHC
Trigger: GCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTG...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTGCTGCACGTGCAGGTTaGAGAGGCGCACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAAARAG*RGAQAG
Trigger: ACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGC...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGGCACCTTCTGGGAGGTaGCATTCTCCTCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRAPSGR*HSPPEP
Trigger: TGGCTCTGGAGGAGAATGCCACCTCCCAGAAGGTGC...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTGATCAGCACAGCTCTTaGGGGCCTGCCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIADQHSS*GPALCF
Trigger: GAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATC...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGCGTAGGGGGTGGGTaGCGCAGCCCTGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYCVGGG*RSPEAP
Trigger: GGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCA...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTCGGAGCTCCTTGTTGTaGGCTGCCTGTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIARSSLL*AACLHS
Trigger: GCTGTGGAGACAGGCAGCCCACAACAAGGAGCTCCG...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCCCCGGCACTCAGAACTaGGCTCAGGCCCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSPGTQN*AQAQLP
Trigger: GGGAAGCTGGGCCTGAGCTCAGTTCTGAGTGCCGGG...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTCAGGGTGGGGGCTGTTaGCTCAAAGGGTGGATACAG +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAQGGGC*LKGWIQ
Trigger: CTGTATCCACCCTTTGAGGCAACAGCCCCCACCCTG...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATCCCAGGCCCTTCTGGTaGATCCACGCCCGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYPRPFW*IHARCL
Trigger: GAGACACCGGGCGTGGATGCACCAGAAGGGCCTGGG...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCAAGACACCTCCAAGACTaGTGCCTCTGGGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASRHLQD*CLWDSL
Trigger: GAGGCTGTCCCAGAGGCAGCAGTCTTGGAGGTGTCT...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGTCCCCTTTTCCTTCCTaGACAGTCTCCAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRSPFPS*TVSSGG
Trigger: ACCTCCGCTGGAGACTGTGCAGGAAGGAAAAGGGGA...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGTCCTCTCCCACGTGTTaGTGGATCCTCCTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLSSPTC*WILLSS
Trigger: GCTAGAGAGGAGGATCCAGCAACACGTGGGAGAGGA...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TGTCTCCACAGCAGCTGGGCAATAGAACTTGTCCACTTGAGTTTGATCTCTGGTGCTGAGAGGAGAAGCTaGACGCAAGTTCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: CLHSSWAIELVHLSLISGAERRS*TQVLDL
Trigger: AAGATCCAGAACTTGCGTGCAGCTTCTCCTCTCAGC...ACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGGGCAAGCAATGTGGCTaGTCTGACTCCTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLGKQCG*SDSCRR
Trigger: TCTCCTGCAGGAGTCAGAGCAGCCACATTGCTTGCC...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTTCCACAGAGTTCAGTTaGAAGGTCATCATGAATGAG +
Preference number: 4 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSSTEFS*KVIMNE
Trigger: CTCATTCATGATGACCTTCCAACTGAACTCTGTGGA...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTCAGCACCTTCTGCAGTaGCTTGGGCATTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAQHLLQ*LGHSHC
Trigger: GCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTG...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGATAGTCCTCTCCACATaGGGCCAGGGAGCAATGGGA +
Preference number: 4 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRIVLST*GQGAMG
Trigger: TCCCATTGCTCCCTGGCCCCATGTGGAGAGGACTAT...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp TCCACAGAGTTCAGTTGGAAGGTCATCATGAATGAGAATCAGCAGCCGCTGAACCTGGCTCACTCAAGGTaGCCACGTAATCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: STEFSWKVIMNENQQPLNLAHSR*PRNLVH
Trigger: GTGAACAAGATTACGTGGCCACCTTGAGTGAGCCAG...GTTCAGCGGCTGCTGATTCTCATTCATGATGACCTTCCAACTGAACTCTGTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCCAATAAACAGGTGTGTCTCCACAGCAGCTaGGCAATAGAACTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LVRFLSSLLQSRVPNKQVCLHSS*AIELVH
Trigger: GTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA...CACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTGGATCTCCTGAGTCCTaGAGTTGGCTCAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAGSPES*SWLKAG
Trigger: TCCTGCCTTGAGCCAACTTCAGGACTCAGGAGATCC...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000556399.5
CDS-3UTR TCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATCCACCTCAGTGCTGGTaGCCTCCAGGCCTCGGATCA +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYPPQCW*PPGLGS
Trigger: TGATCCGAGGCCTGGAGGTCACCAGCACTGAGGTGG...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGGGTGGCGCAGCCCTaGAGCTCCCGCAGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYWVAQP*SSRRKC
Trigger: ACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCA...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp CCTCCTATTGTTTGCATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCATCCCAGTTTGTCTGTaGCCAGTTCAGCCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: PPIVCIASLLVTPQNGVTIPVCL*PVQPQG
Trigger: TCCTTGAGGCTGAACTGGTCACAGACAAACTGGGAT...GGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp CCTCCTATTGTTTGCATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCCTGAGGACCTCATTTTaGGAACTGCTGGACTGTGCT +
Preference number: 4 (lower is better)
Translates to: PPIVCIASLLVTPQNGVTLRTSF*ELLDCA
Trigger: AGCACAGTCCAGCAGTTCTCAAAATGAGGTCCTCAG...GGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGATGGACACCATCTGCTaGACTCGGAGCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLMDTIC*TRSSLL
Trigger: CAACAAGGAGCTCCGAGTGCAGCAGATGGTGTCCAT...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCCCTCCAGCTTGCTGCTaGGAGTGGAGCGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSPPACC*EWSAAS
Trigger: TGAGGCTGCGCTCCACTCCCAGCAGCAAGCTGGAGG...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATCCTCCAGCTTGCTGCTaGGAGTGGAGCGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYPPACC*EWSAAS
Trigger: TGAGGCTGCGCTCCACTCCCAGCAGCAAGCTGGAGG...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGAGACGTCGCTATTTTTaGTACGATTCCTGTCATCCC +
Preference number: 4 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAERRRYF*YDSCHP
Trigger: GGGATGACAGGAATCGTACCAAAAATAGCGACGTCT...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTCAAGCTACATCAGGGTaGTCAGAGACGGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAQATSG*SETETA
Trigger: TGCAGTCTCCGTCTCTGATCACCCTGATGTAGCTTG...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTAAGGGGAGGATCTCCTaGGTCCTGAAGTTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAKGRIS*VLKLAQ
Trigger: TTGAGCCAACTTCAGGACTCAGGAGATCCTCCCCTT...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000556399.5
CDS-3UTR TCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCCACGTGTTCCCGTGGTaGGCACGTCCTGTCTACCAC +
Preference number: 4 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSHVFPW*ARPVYH
Trigger: GTGGTAGACAGGACGTGCTCACCACGGGAACACGTG...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATCTCAGGAGGGCACGGTaGGGTAATGGTCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYLRRAR*GNGQQS
Trigger: GCTCTGCTGACCATTACCCCACCGTGCCCTCCTGAG...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTGCACAAGCTGGTGAATaGCCTCGTCCACTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAAQAGE*PRPLPD
Trigger: ATCAGGAAGTGGACGAGGCCATTCACCAGCTTGTGC...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCAATATCCAGCACCTTCTaGGAGGTGGCATTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASISSTF*EVAFSS
Trigger: GGAGGAGAATGCCACCTCCCAGAAGGTGCTGGATAT...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTGTGACACCTCAGAATaGAGTCACCAGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIACDTSE*SHQGLQ
Trigger: CTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACA...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTGGAGTAGGTGCAGTGTaGGAGAAGGAGCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAGVGAV*EKELQR
Trigger: TCTCTGAAGCTCCTTCTCCCACACTGCACCTACTCC...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR CAA 72 bp AAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTaGCATAGCTTCATTGCTTGTGACACCTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: KVYGSPVTPSYC*HSFIACDTSEW
Trigger: CCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATCTGTAGATCAGGCCTaGGCAGTGAGTGGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASSVDQA*AVSGGN
Trigger: ATTACCTCCACTCACTGCTCAGGCCTGATCTACAGA...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATCAGCCCAAAGTGTGCTaGGAGGAGAAGCTGCACGCA +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYQPKVC*EEKLHA
Trigger: TGCGTGCAGCTTCTCCTCTCAGCACACTTTGGGCTG...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTCTGCCAGCACCTTCTaGAGTGGCTTGGGCATTCCC +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYSASTF*SGLGIP
Trigger: GGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGA...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCCAATAAACAGGTGCACCCTCCTATTGTTTaGATAGCTTCATTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LVRFLSSLLQSRVPNKQVHPPIV*IASLLV
Trigger: CACAAGCAATGAAGCTATGCAAACAATAGGAGGGTG...CACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR GCA 90 bp TCCACAGAGTTCAGTTGGAAGGTCATCATGAATGAGAATCAGCAGCCGCTGAACCACCCTCCTATTGTTTaGATAGCTTCATTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: STEFSWKVIMNENQQPLNHPPIV*IASLLV
Trigger: CACAAGCAATGAAGCTATGCAAACAATAGGAGGGTG...GTTCAGCGGCTGCTGATTCTCATTCATGATGACCTTCCAACTGAACTCTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATGCCTACCTATGTCCTaGTTCCCTCTTTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASCLPMS*FPLWVL
Trigger: AAGGACCCAAAGAGGGAAGCAGGACATAGGTAGGCA...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCGGGCTTCTTGGTGGCTaGCATCTTCCTTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSGLLGG*HLPCPQ
Trigger: CTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCC...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATCCTCCTTAACCAGGTaGCATTCTGGAAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASSSLTR*HSGSLC
Trigger: GCACAAGCTTCCAGAATGCCACCTGGTTAAGGAGGA...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR CCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATATTCCCAATGCCCATaGACACCATCTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASYSQCP*TPSAAL
Trigger: GAGTGCAGCAGATGGTGTCCATGGGCATTGGGAATA...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTGAAGGTCATCATGAATaGGAATCAGCAGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAEGHHE*ESAAAE
Trigger: TTCAGCGGCTGCTGATTCTCATTCATGATGACCTTC...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR GCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTTCCTCTGGCTCTGCTaGTCCCTCCAGCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSFLWLC*SLQLLN
Trigger: ATTGAGGAGCTGGAGGGAGCAGCAGAGCCAGAGGAA...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATAGGCACAAGCCTCATTaGGCACAGGAACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYRHKPH*AQEPPA
Trigger: TGCAGGAGGTTCCTGTGCCCAATGAGGCTTGTGCCT...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATCGAAGAGAAAGACATaGCGAAGGCACTTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASSKRKT*RRHFFR
Trigger: CCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGA...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCGCTTCAGAGAGTGTGTaGAACCTCTGGGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSASESV*NLWEPL
Trigger: CAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGC...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR TCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCGTAGCCACTCAGGTGTaGATAGGTAGGCACAAGCCT +
Preference number: 4 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSVATQV*IGRHKP
Trigger: AGGCTTGTGCCTACCTATTCACACCTGAGTGGCTAC...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATCAAGCTACATCAGGGTaGTCAGAGACGGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYQATSG*SETETA
Trigger: TGCAGTCTCCGTCTCTGATCACCCTGATGTAGCTTG...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR TCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCAAGAATAACCCTAAACTaGAGTTGGCTCAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASRITLN*SWLKAG
Trigger: TCCTGCCTTGAGCCAACTTCAGTTTAGGGTTATTCT...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR GCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCACCCATTCATGTGCCTaGTGGAAGAAGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSTHSCA*WKKRCS
Trigger: GCTACAGCGCTTCTTCCAGCAGGCACATGAATGGGT...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATGTTTTGAGCTCTTTTaGCTCAGATTCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASCFELF*LRFWLP
Trigger: GGGAAGCCAGAATCTGAGCCAAAAGAGCTCAAAACA...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR CCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATGCTGCACGCAAGTTCTaGATCTTCTCCAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYAARKF*IFSRSQ
Trigger: CTGTGACCTGGAGAAGATCCAGAACTTGCGTGCAGC...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTGTTCTAGTTAAGGGCTaGTTGAGGGAAAGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAVLVKG*LRESAQ
Trigger: TTGAGCACTTTCCCTCAACCAGCCCTTAACTAGAAC...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCGCTGTTTCTTGGTCCTaGGGACACATCTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSAVSWS*GHISRR
Trigger: TCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGC...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTGTTTTGAGCTCTTTTaGCTCAGATTCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSCFELF*LRFWLP
Trigger: GGGAAGCCAGAATCTGAGCCAAAAGAGCTCAAAACA...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR CCA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCAGAGTCAAGTGTTTCTaGGGCCAGGGAAATTTGCTT +
Preference number: 4 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSRVKCF*GQGNLL
Trigger: AAGCAAATTTCCCTGGCCCCAGAAACACTTGACTCT...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
3UTR CAA 72 bp TTATCACCCAAAGAGTTTGATAAGAAATGCAGAATATaGGGTTTTACCCCCAGGTTTCGATGCAGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSPKEFDKKCRI*GFTPRFRCSSS
Trigger: AGAGCTACTGCATCGAAACCTGGGGGTAAAACCCAATATTCTGCATTTCTTATCAAACTCTTTGGGTGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CCA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTCCACAGAGTTCAGTTaGAAGGTCATCATGAATGAG +
Preference number: 4 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYSTEFS*KVIMNE
Trigger: CTCATTCATGATGACCTTCCAACTGAACTCTGTGGA...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
3UTR CAA 72 bp TCACCTCTTCAGACACTTAGTTATCACCCAAAGAGTTaGATAAGAAATGCAGAATATTGGGTTTTACCCCCA +
Preference number: 4 (lower is better)
Translates to: SPLQTLSYHPKS*IRNAEYWVLPP
Trigger: TGGGGGTAAAACCCAATATTCTGCATTTCTTATCAAACTCTTTGGGTGATAACTAAGTGTCTGAAGAGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298694.9
3UTR CAA 72 bp CTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTaGAGGGAAAGTGCTCAAGTTATTTATCACCTTAAT +
Preference number: 4 (lower is better)
Translates to: LGFIFCVLVKGW*RESAQVIYHLN
Trigger: ATTAAGGTGATAAATAACTTGAGCACTTTCCCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS GCA 90 bp GGTGGGCGTGCTCCATCCTGGCCCCGAGGCCCCAGGCCCTTCTGGTaGATCCACGCCCGGTGTCTCCGGTGGCGGCCCTTCCCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: GGRAPSWPRGPRPFW*IHARCLRWRPFPPA
Trigger: CGCTGGAGGGAAGGGCCGCCACCGGAGACACCGGGCGTGGATGCACCAGAAGGGCCTGGGGCCTCGGGGCCAGGATGGAGCACGCCCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 90 bp CGAGGCCCCAGGCCCTTCTGGTGCATCCACGCCCGGTGTCTCCGGTaGCGGCCCTTCCCTCCAGCGCCCTTGCGGGTGGGTACCGTCCGG +
Preference number: 5 (lower is better)
Translates to: RGPRPFWCIHARCLR*RPFPPAPLRVGTVR
Trigger: CCGGACGGTACCCACCCGCAAGGGCGCTGGAGGGAAGGGCCGCCACCGGAGACACCGGGCGTGGATGCACCAGAAGGGCCTGGGGCCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS TCA 90 bp TCCCGGCGAAAGGCCGGGAAGGGAGGGGCCGGCATGCTCAAAGGATaGCACGGCCACGGAGGCCCGGGTGCGGGCGGCTGCAGAGAGTGG +
Preference number: 5 (lower is better)
Translates to: SRRKAGKGGAGMLKG*HGHGGPGAGGCREW
Trigger: CCACTCTCTGCAGCCGCCCGCACCCGGGCCTCCGTGGCCGTGTCATCCTTTGAGCATGCCGGCCCCTCCCTTCCCGGCCTTTCGCCGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554514.1
CDS CCA 90 bp CCCGGTGTCTCCGGTGGCGGCCCTTCCCTCCAGCGCCCTTGCGGGTaGGTACCGTCCGGACTCTGGAGAGGCCTGGGGAGCCTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: PGVSGGGPSLQRPCG*VPSGLWRGLGSLQH
Trigger: ATGCTGAAGGCTCCCCAGGCCTCTCCAGAGTCCGGACGGTACCCACCCGCAAGGGCGCTGGAGGGAAGGGCCGCCACCGGAGACACCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCTCATTCCCTCCAGCGCCCTaGCGGGTGGGTACCGTCCGG +
Preference number: 5 (lower is better)
Translates to: QVPRSSGVSSGPGGGTGSFPPAP*RVGTVR
Trigger: CCGGACGGTACCCACCCGCAAGGGCGCTGGAGGGAA...TGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS CCA 90 bp GGCCCTTCCCTCCAGCGCCCTTGCGGGTGGGTACCGTCCGGACTCTaGAGAGGCCTGGGGAGCCTTCAGCATCTGTTGGGCTCCCCCTCA +
Preference number: 5 (lower is better)
Translates to: GPSLQRPCGWVPSGL*RGLGSLQHLLGSPS
Trigger: TGAGGGGGAGCCCAACAGATGCTGAAGGCTCCCCAGGCCTCTCCAGAGTCCGGACGGTACCCACCCGCAAGGGCGCTGGAGGGAAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 90 bp GTTCAGCGTGTCTCGGGAGGGTGGGGGCTCCTCAGGAGGGCACGGTaGGGTAATGGTCAGCAGAGCTCGCCCACTCTGGTCCACCCCTCC +
Preference number: 5 (lower is better)
Translates to: VQRVSGGWGLLRRAR*GNGQQSSPTLVHPS
Trigger: GGAGGGGTGGACCAGAGTGGGCGAGCTCTGCTGACCATTACCCCACCGTGCCCTCCTGAGGAGCCCCCACCCTCCCGAGACACGCTGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555052.1
ENST00000556399.5
CDS-3UTR CAA 90 bp AGCCCAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGAGCCTTCAGCATCTGTaGGGCTCCCCCTCACGGGCA +
Preference number: 5 (lower is better)
Translates to: SPGAPKFRRQLRPRGWHWSLQHL*GSPSRA
Trigger: TGCCCGTGAGGGGGAGCCCAACAGATGCTGAAGGCT...CCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS GCA 90 bp GGGGCTGTTGCCTCAAAGGGTGGATACAGGGCGGCGAGAGTGCTCTaGACACAGTCCTCCACTGGCTCAGGCTCCATGGCTCGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: GAVASKGGYRAARVL*TQSSTGSGSMARRR
Trigger: CCGGCGCCGAGCCATGGAGCCTGAGCCAGTGGAGGACTGTGTGCAGAGCACTCTCGCCGCCCTGTATCCACCCTTTGAGGCAACAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555232.5
ENST00000556399.5
CDS GCA 90 bp CCCTGGCCTCAGGGGGCAAGATCCGGAGGCTTCTCCCACAGCCTCTaGTGGGGGCTCAGACACCTCCAAGACTGCTGCCTCTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: PWPQGARSGGFSHSL*WGLRHLQDCCLWDS
Trigger: GCTGTCCCAGAGGCAGCAGTCTTGGAGGTGTCTGAGCCCCCAGCAGAGGCTGTGGGAGAAGCCTCCGGATCTTGCCCCCTGAGGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTACAGGGTGGGGGCTGTaGCCTCAAAGGGTGGATACA +
Preference number: 5 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVTGWGL*PQRVDT
Trigger: TGTATCCACCCTTTGAGGCAACAGCCCCCACCCTGT...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GTGTCCGGTGGAAGCTGCGAAGCCTTTCCCGGGCACTCAGGGCAGCAGCCCAGGTCTCCAGCGGAGGTGTaGGAGTGTCAGACAGGGGGC +
Preference number: 5 (lower is better)
Translates to: VSGGSCEAFPGHSGQQPRSPAEV*ECQTGG
Trigger: GCCCCCTGTCTGACACTCCAACACCTCCGCTGGAGA...CCTGGGCTGCTGCCCTGAGTGCCCGGGAAAGGCTTCGCAGCTTCCACCGGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CGTCTGCCCGCCGTCGTCGGTAGCCCCGTGGGCTCGCCTCCTCTCCCACGTGTTGCCAGGGAAATTTGCTaGACGTCCAGATCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RLPAVVGSPVGSPPLPRVAREIC*TSRSQA
Trigger: GGCCTGGGATCTGGACGTCAAGCAAATTTCCCTGGC...AACACGTGGGAGAGGAGGCGAGCCCACGGGGCTACCGACGACGGCGGGCAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS GCA 90 bp GGGTGGGGGCTGTTGCCTCAAAGGGTGGATACAGGGCGGCGAGAGTaGTCTGCACACAGTCCTCCACTGGCTCAGGCTCCATGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: GWGLLPQRVDTGRRE*SAHSPPLAQAPWLG
Trigger: GCCGAGCCATGGAGCCTGAGCCAGTGGAGGACTGTGTGCAGAGCACTCTCGCCGCCCTGTATCCACCCTTTGAGGCAACAGCCCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555232.5
ENST00000556399.5
CDS CCA 90 bp CCGGGTACCCAGCGCCTCCTCAGGAAGTGGAGGGCTGGGAAGCCCTaGAGGTCCAGAGGGCAGTTCTGGGGGCAGTGTACTTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: PGTQRLLRKWRAGKP*RSRGQFWGQCTWLM
Trigger: CATCAGCCAAGTACACTGCCCCCAGAACTGCCCTCTGGACCTCCAGGGCTTCCCAGCCCTCCACTTCCTGAGGAGGCGCTGGGTACCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 90 bp TGGCCTCAGGGGGCAAGATCCGGAGGCTTCTCCCACAGCCTCTGCTaGGGGCTCAGACACCTCCAAGACTGCTGCCTCTGGGACAGCCTC +
Preference number: 5 (lower is better)
Translates to: WPQGARSGGFSHSLC*GLRHLQDCCLWDSL
Trigger: GAGGCTGTCCCAGAGGCAGCAGTCTTGGAGGTGTCTGAGCCCCCAGCAGAGGCTGTGGGAGAAGCCTCCGGATCTTGCCCCCTGAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTGGAGCCAGAGCCTTCAGCATCTGTaGGGCTCCCCCTCACGGGCA +
Preference number: 5 (lower is better)
Translates to: QASDQHSSWGPALCFWSQSLQHL*GSPSRA
Trigger: TGCCCGTGAGGGGGAGCCCAACAGATGCTGAAGGCT...CTGGCTCCAGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGCACAAGCTGGTGAATTTCCCTCCAGCGCCCTaGCGGGTGGGTACCGTCCGG +
Preference number: 5 (lower is better)
Translates to: PLLLLLHVQVGEAHKLVNFPPAP*RVGTVR
Trigger: CCGGACGGTACCCACCCGCAAGGGCGCTGGAGGGAA...ATTCACCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CTCCACGGCCAGCAGGTCTCTGCCACGGGCCTCTTGTTCCCGGAGCAGCTGTACGCACTGCCGCTGCTCTaGCTGCTGCACGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: LHGQQVSATGLLFPEQLYALPLL*LLHVQV
Trigger: AACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGC...GTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCGTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAGCCTCCATGGAGCCCTaGCTTAAGGGACTGAGCGCA +
Preference number: 5 (lower is better)
Translates to: SRPQCVGGGWRSPEAPAEASMEP*LKGLSA
Trigger: TGCGCTCAGTCCCTTAAGCAAGGGCTCCATGGAGGC...TTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CCATCCCTCTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCCCCCCTTCAGGGCCCTaGAGCTTGCTGAACAGGAGG +
Preference number: 5 (lower is better)
Translates to: PSLCSAVSRGSASTFCSGPPSGP*SLLNRR
Trigger: CCTCCTGTTCAGCAAGCTCAAGGGCCCTGAAGGGGG...GCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAGAGGGATGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGTTCCCTCCAGCGCCCTaGCGGGTGGGTACCGTCCGG +
Preference number: 5 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQFPPAP*RVGTVR
Trigger: CCGGACGGTACCCACCCGCAAGGGCGCTGGAGGGAA...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CTGCAGTGCCGTCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATGGATCAGCACAGCTCTaGGGGGCCTGCCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: LQCRQPGICQHLLQWLGHGSAQL*GACPLL
Trigger: AAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCC...ATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGACGGCACTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAAGTGTGACTCGGAGCTCCTTGTaGTGGGCTGCCTGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: PQCVGGGWRSPEAPAESVTRSSL*WAACLH
Trigger: GTGGAGACAGGCAGCCCACAACAAGGAGCTCCGAGT...CACACTTTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGGGCTGGGGCTGTTTCTaGGTCCTGGGGACACATCTC +
Preference number: 5 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQGWGCF*VLGTHL
Trigger: GAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCC...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS TCA 90 bp GGGGGTGGGGTGCTGGTGTGGGAAAGCCCTCTTGGCTCCCTGGAATaGCCCTCAGTCTCACAGAGGGCCTCCCAGCCAGTCCCACTGATT +
Preference number: 5 (lower is better)
Translates to: GGGVLVWESPLGSLE*PSVSQRASQPVPLI
Trigger: AATCAGTGGGACTGGCTGGGAGGCCCTCTGTGAGACTGAGGGTCATTCCAGGGAGCCAAGAGGGCTTTCCCACACCAGCACCCCACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554514.1
CDS CCA 90 bp CCCGATAAGTCCTCTCCACCACCTGGAACACCTGGCCCAACAGGGTaGGGGCTGTTGCCTCAAAGGGTGGATACAGGGCGGCGAGAGTGC +
Preference number: 5 (lower is better)
Translates to: PDKSSPPPGTPGPTG*GLLPQRVDTGRREC
Trigger: GCACTCTCGCCGCCCTGTATCCACCCTTTGAGGCAACAGCCCCCACCCTGTTGGGCCAGGTGTTCCAGGTGGTGGAGAGGACTTATCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555232.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AGCCCAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGGAAGCTTGTGCTCACTaGGTGAGGGCAGATTGCCAA +
Preference number: 5 (lower is better)
Translates to: SPGAPKFRRQLRPRGWHWEACAH*VRADCQ
Trigger: TTGGCAATCTGCCCTCACCAAGTGAGCACAAGCTTC...CCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR CAA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACTGCTGCACGTGCAGGTaGGAGAGGCGCACAAGCTGG +
Preference number: 5 (lower is better)
Translates to: SGEVACRVYASRARRRRNCCTCR*ERRTSW
Trigger: CCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCA...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CCCGGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTCAGGGCCCTTGAGCTaGCTGAACAGGAGGAGATGC +
Preference number: 5 (lower is better)
Translates to: PGPAARVPVVSTSCLPPQSGPLS*LNRRRC
Trigger: GCATCTCCTCCTGTTCAGCAAGCTCAAGGGCCCTGA...CTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS GCA 90 bp AACAGCTCCACATACTCGCCCTCAGGTCCTTCCACAGGGGCATTGTaGCCATCCCCAGGACTCCGGGTACCCAGCGCCTCCTCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: NSSTYSPSGPSTGAL*PSPGLRVPSASSGS
Trigger: ACTTCCTGAGGAGGCGCTGGGTACCCGGAGTCCTGGGGATGGGCACAATGCCCCTGTGGAAGGACCTGAGGGCGAGTATGTGGAGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 90 bp GGGCCTGTGTGTCTTGGTGAGGGCAGATTGCCAAGGGCTTCTTGGTaGCTGGCATCTTCCTTGTCCCCAGGGCTCAGTGGGGCACTGTCC +
Preference number: 5 (lower is better)
Translates to: GPVCLGEGRLPRASW*LASSLSPGLSGALS
Trigger: GGACAGTGCCCCACTGAGCCCTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGACACACAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS-3UTR CAA 90 bp CTCCACGGCCAGCAGGTCTCTGCCACGGGCCTCTTGTTCCCGGAGCAGCTGTACGTTGGCCGGTCCTTGTaGATGCCTTGTAGCCACTCA +
Preference number: 5 (lower is better)
Translates to: LHGQQVSATGLLFPEQLYVGRSL*MPCSHS
Trigger: TGAGTGGCTACAAGGCATCAACAAGGACCGGCCAAC...GTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCCGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGTCCCCAGGCATATGGCTGGCATCTTCCTaGTCCCCAGGGCTCAGTGGG +
Preference number: 5 (lower is better)
Translates to: ARNRSSVSCRADKVSPGIWLASS*SPGLSG
Trigger: CCCACTGAGCCCTGGGGACAAGGAAGATGCCAGCCA...TATGCCTGGGGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCTCAGCCTCTTCTGGAATGTaGTCCCCTTTTCCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: QVPRSSGVSSGPGGGTGSASSGM*SPFPSC
Trigger: GCAGGAAGGAAAAGGGGACAACATTCCAGAAGAGGC...TGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TCGCCGCAGGCACTGCCGCTGCTCTTGCTGCTGCACGTGCAGGTTGGAGAGGCGGGAGGTAATGAAGAGTaGTGTTCAGCGTGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: SPQALPLLLLLHVQVGEAGGNEE*CSACLG
Trigger: CCCGAGACACGCTGAACACAACTCTTCATTACCTCC...CGCCTCTCCAACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGCCTGCGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AGCAGGCCCCAATGCGTAGGGGGTGGGTGGCGCAGCCCTGAAGCTCCCGCAGAAGGTGGCCACGTAATCTaGTTCACAGGCAATCAGCTC +
Preference number: 5 (lower is better)
Translates to: SRPQCVGGGWRSPEAPAEGGHVI*FTGNQL
Trigger: GAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC...TTCTGCGGGAGCTTCAGGGCTGCGCCACCCACCCCCTACGCATTGGGGCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGTGCACTCGGAGCTCCTaGTTGTGGGCTGCCTGTCTC +
Preference number: 5 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERCTRSS*LWAACL
Trigger: GAGACAGGCAGCCCACAACAAGGAGCTCCGAGTGCA...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS CCA 90 bp TCTGGGCCTGTGTGTCTTGGTGAGGGCAGATTGCCAAGGGCTTCTTaGTGGCTGGCATCTTCCTTGTCCCCAGGGCTCAGTGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: SGPVCLGEGRLPRAS*WLASSLSPGLSGAL
Trigger: CAGTGCCCCACTGAGCCCTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGACACACAGGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS-3UTR CAA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACTTGGCAAGCAGGTGCTaGGCTGGTACCAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: SGEVACRVYASRARRRRNLASRC*AGTRKS
Trigger: GGACTTCCTGGTACCAGCCAAGCACCTGCTTGCCAA...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCATGGCTGGCATCTTCCTaGTCCCCAGGGCTCAGTGGG +
Preference number: 5 (lower is better)
Translates to: LQSVCLSCTPPPKPQLKAWLASS*SPGLSG
Trigger: CCCACTGAGCCCTGGGGACAAGGAAGATGCCAGCCA...TGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGCCCCCCTTGGCCCTCCAGCTaGCTGCTGGGAGTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: RNHNSKQSPLSPMFSVSPPWPSS*LLGVER
Trigger: GCGCTCCACTCCCAGCAGCAAGCTGGAGGGCCAAGG...GGGGCTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TGGCGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCTCGATGCAAGCCTTGGCCCTCCAGCTaGCTGCTGGGAGTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: WRRHFFRPQMTVKGSRCKPWPSS*LLGVER
Trigger: GCGCTCCACTCCCAGCAGCAAGCTGGAGGGCCAAGG...CTTGCATCGAGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGGCACTGCCGCTGCTCTaGCTGCTGCACGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQALPLL*LLHVQV
Trigger: AACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGC...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TCAGCCGGGGATCTGCCAGCACCTTCTGCAGTGGCTTGGGCATTCCCACTGCCTTCAGGGCCCTTGAGCTaGCTGAACAGGAGGAGATGC +
Preference number: 5 (lower is better)
Translates to: SAGDLPAPSAVAWAFPLPSGPLS*LNRRRC
Trigger: GCATCTCCTCCTGTTCAGCAAGCTCAAGGGCCCTGA...AGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGTGCTGGCAGATCCCCGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GTGACCTCCAGGCCTCGGATCAGCACAGCTCTTGGGGGCCTGCCCTCTGCTTCTCGCTCCCCAAGGGCTTaGATGTCCAGGAAGGGTTTA +
Preference number: 5 (lower is better)
Translates to: VTSRPRISTALGGLPSASRSPRA*MSRKGL
Trigger: TAAACCCTTCCTGGACATCAAAGCCCTTGGGGAGCG...AGAAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCCGAGGCCTGGAGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCTGGGGCCAGGGAAATTaGCTTGACGTCCAGATCCCA +
Preference number: 5 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGWGQGN*LDVQIP
Trigger: TGGGATCTGGACGTCAAGCAAATTTCCCTGGCCCCA...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS GCA 90 bp AAGCAGGTGCTTGGCTGGTACCAGGAAGTCCAGCGTGTACCTCAGTaGGTCCTCCCGATAAGTCCTCTCCACCACCTGGAACACCTGGCC +
Preference number: 5 (lower is better)
Translates to: KQVLGWYQEVQRVPQ*VLPISPLHHLEHLA
Trigger: GGCCAGGTGTTCCAGGTGGTGGAGAGGACTTATCGGGAGGACGCACTGAGGTACACGCTGGACTTCCTGGTACCAGCCAAGCACCTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS GCA 90 bp CCACTGTATTGGGCACAGGCTTCCTGCTGGACCTTGGCAAGCAGGTaGTTGGCTGGTACCAGGAAGTCCAGCGTGTACCTCAGTGCGTCC +
Preference number: 5 (lower is better)
Translates to: PLYWAQASCWTLASR*LAGTRKSSVYLSAS
Trigger: GGACGCACTGAGGTACACGCTGGACTTCCTGGTACCAGCCAAGCACCTGCTTGCCAAGGTCCAGCAGGAAGCCTGTGCCCAATACAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 90 bp TTGGGCACAGGCTTCCTGCTGGACCTTGGCAAGCAGGTGCTTGGCTaGTACCAGGAAGTCCAGCGTGTACCTCAGTGCGTCCTCCCGATA +
Preference number: 5 (lower is better)
Translates to: LGTGFLLDLGKQVLG*YQEVQRVPQCVLPI
Trigger: TATCGGGAGGACGCACTGAGGTACACGCTGGACTTCCTGGTACCAGCCAAGCACCTGCTTGCCAAGGTCCAGCAGGAAGCCTGTGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 90 bp TGTATTGGGCACAGGCTTCCTGCTGGACCTTGGCAAGCAGGTGCTTaGCTGGTACCAGGAAGTCCAGCGTGTACCTCAGTGCGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: CIGHRLPAGPWQAGA*LVPGSPACTSVRPP
Trigger: GGGAGGACGCACTGAGGTACACGCTGGACTTCCTGGTACCAGCCAAGCACCTGCTTGCCAAGGTCCAGCAGGAAGCCTGTGCCCAATACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 90 bp AGCTTGTGCTCACTTGGTGAGGGCAGATTGCCAAGGGCTTCTTGGTaGCTGGCATCTTCCTTGTCCCCAGGGCTCAGTGGGGCACTGTCC +
Preference number: 5 (lower is better)
Translates to: SLCSLGEGRLPRASW*LASSLSPGLSGALS
Trigger: GGACAGTGCCCCACTGAGCCCTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGTGAGCACAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS CCA 90 bp GGAAGCTTGTGCTCACTTGGTGAGGGCAGATTGCCAAGGGCTTCTTaGTGGCTGGCATCTTCCTTGTCCCCAGGGCTCAGTGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: GSLCSLGEGRLPRAS*WLASSLSPGLSGAL
Trigger: CAGTGCCCCACTGAGCCCTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGTGAGCACAAGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS CCA 90 bp TCTGCATGCACCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATaGAGGCCACTCTCAACCTGCTCCAGCCGCTGTTCAAAGATATCC +
Preference number: 5 (lower is better)
Translates to: SACTCWKKRCSRRAR*RPLSTCSSRCSKIS
Trigger: GGATATCTTTGAACAGCGGCTGGAGCAGGTTGAGAGTGGCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGTGCATGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS-3UTR CAA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTCCTGTTGGCCGGTCCTaGTTGATGCCTTGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCPVGRS*LMPCSH
Trigger: GTGGCTACAAGGCATCAACAAGGACCGGCCAACAGG...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGCCTTGGCCCTCCAGCTaGCTGCTGGGAGTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: RRHQARETRDSGGRAILWPWPSS*LLGVER
Trigger: GCGCTCCACTCCCAGCAGCAAGCTGGAGGGCCAAGG...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GCAGTGTGGGAGAAGGAGCTTCAGAGAGTGTGTGGAACCTCTGGGAGCCACTGTGGATCAGCACAGCTCTaGGGGGCCTGCCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: AVWEKELQRVCGTSGSHCGSAQL*GACPLL
Trigger: AAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCC...ACAGTGGCTCCCAGAGGTTCCACACACTCTCTGAAGCTCCTTCTCCCACACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CAA 90 bp CCCTTGCTTAAGGGACTGAGCGCAGCCAGACCATTCTCCAGTTTGTGTCGGTGCGGATCAGCACAGCTCTaGGGGGCCTGCCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: PLLKGLSAARPFSSLCRCGSAQL*GACPLL
Trigger: AAGCAGAGGGCAGGCCCCCAAGAGCTGTGCTGATCC...GCACCGACACAAACTGGAGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS GCA 90 bp CCAGGTGGCATTCTGGAAGCTTGTGCTCACTTGGTGAGGGCAGATTaGCAAGGGCTTCTTGGTGGCTGGCATCTTCCTTGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PGGILEACAHLVRAD*QGLLGGWHLPCPQG
Trigger: GCCCTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGTGAGCACAAGCTTCCAGAATGCCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS-3UTR CAA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCTTGGTGAGGGCAGATaGCCAAGGGCTTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQLGEGR*PRASWW
Trigger: CCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAG...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCTTGGTGAGGGCAGATaGCCAAGGGCTTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: ECMPLVHAAAETTTQSRVLGEGR*PRASWW
Trigger: CCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAG...GACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTTGGCATTCTGGAAGCTaGTGCTCACTTGGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCWHSGS*CSLGEG
Trigger: GCCCTCACCAAGTGAGCACAAGCTTCCAGAATGCCA...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR CAA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGTGCTGCACGTGCAGGTaGGAGAGGCGCACAAGCTGG +
Preference number: 5 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQCCTCR*ERRTSW
Trigger: CCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCA...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCGGTGGCCACGTAATCTaGTTCACAGGCAATCAGCTC +
Preference number: 5 (lower is better)
Translates to: CLSCTPPPKPQLKAESAVGGHVI*FTGNQL
Trigger: GAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC...GACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCGCCTCCATGGAGCCCTaGCTTAAGGGACTGAGCGCA +
Preference number: 5 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCASMEP*LKGLSA
Trigger: TGCGCTCAGTCCCTTAAGCAAGGGCTCCATGGAGGC...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CAA 90 bp GGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGTCAGGGCCCTTGAGCTaGCTGAACAGGAGGAGATGC +
Preference number: 5 (lower is better)
Translates to: GKKFSDRPGLHYAPLPSQSGPLS*LNRRRC
Trigger: GCATCTCCTCCTGTTCAGCAAGCTCAAGGGCCCTGA...CTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GGCCCAGCAGCACGTGTTCCCGTGGTGAGCACGTCCTGTCTACCACCTCAGTGCCTTGTCCACTTGAGTTaGATCTCTGGTGAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: GPAARVPVVSTSCLPPQCLVHLS*ISGEVA
Trigger: GGCAACCTCACCAGAGATCAAACTCAAGTGGACAAG...GCACTGAGGTGGTAGACAGGACGTGCTCACCACGGGAACACGTGCTGCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACACTCGGAGCTCCTTGTaGTGGGCTGCCTGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHTRSSL*WAACLH
Trigger: GTGGAGACAGGCAGCCCACAACAAGGAGCTCCGAGT...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS GCA 90 bp TCGCCCACTCTGGTCCACCCCTCCCGTCAGGATGAGGAATCCAGATaGCATCAAGTCCCAAGCTACATCAGGGTGATCAGAGACGGAGAC +
Preference number: 5 (lower is better)
Translates to: SPTLVHPSRQDEESR*HQVPSYIRVIRDGD
Trigger: GTCTCCGTCTCTGATCACCCTGATGTAGCTTGGGACTTGATGGCATCTGGATTCCTCATCCTGACGGGAGGGGTGGACCAGAGTGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS GCA 90 bp CAAGCACCCCCTTCCTCAGCTCTGCCCAGTACCCTTGTTGTGGGCTaGCTGTCTCCACAGCAGCTGGGCAATAGAACTTGTCCACTTGAG +
Preference number: 5 (lower is better)
Translates to: QAPPSSALPSTLVVG*LSPQQLGNRTCPLE
Trigger: CTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACAGGCAGCCCACAACAAGGGTACTGGGCAGAGCTGAGGAAGGGGGTGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS CCA 90 bp CTTCTTTCTTCTGTTTCCTTTGCCTGTTCTCCGAGGGGTACCAGGTaGTCCTTCAGCCCCCTGGCCTCCTCCTCCTCCTCCTCTAAGCTC +
Preference number: 5 (lower is better)
Translates to: LLSSVSFACSPRGTR*SFSPLASSSSSSKL
Trigger: GAGCTTAGAGGAGGAGGAGGAGGAGGCCAGGGGGCTGAAGGACCACCTGGTACCCCTCGGAGAACAGGCAAAGGAAACAGAAGAAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
ENST00000556399.5
CDS-3UTR CAA 90 bp AGGGCAATACTCTGGTCGTTAGACCTCCTCTGTGTCCAGGAAGCAGAGGGAAGACCAGGGGCCAGACACTaGAGTGCTAGTCGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: RAILWSLDLLCVQEAEGRPGARH*SASRGA
Trigger: AGCACCCCGACTAGCACTCAAGTGTCTGGCCCCTGG...TCTTCCCTCTGCTTCCTGGACACAGAGGAGGTCTAACGACCAGAGTATTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCCCAGGGGCCAGACACTaGAGTGCTAGTCGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: AGAVSWSWGHISRRVKCFPGARH*SASRGA
Trigger: AGCACCCCGACTAGCACTCAAGTGTCTGGCCCCTGG...GAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GACCTCAGCGCTGAAAGCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGTTGGCCGGTCCTTGTaGATGCCTTGTAGCCACTCA +
Preference number: 5 (lower is better)
Translates to: DLSAESTESQLCLLQGRQVGRSL*MPCSHS
Trigger: TGAGTGGCTACAAGGCATCAACAAGGACCGGCCAAC...TTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGCTTTCAGCGCTGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AGGCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTTCTCCAGCGGAGGTGTaGGAGTGTCAGACAGGGGGC +
Preference number: 5 (lower is better)
Translates to: RLGLFLGPGDTSPEESSVSPAEV*ECQTGG
Trigger: GCCCCCTGTCTGACACTCCAACACCTCCGCTGGAGA...AACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GCACGGAATCGCAGCTCTGTCTCCTGCAGGGCAGACAAGGTGTCCCCAGGCATATGCAGCTCCTCTGGCTaGGCCACTCTTTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: ARNRSSVSCRADKVSPGICSSSG*ATLFRS
Trigger: TGATCTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCA...TATGCCTGGGGACACCTTGTCTGCCCTGCAGGAGACAGAGCTGCGATTCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AGGCTGGGGCTGTTTCTTGGTCCTGGGGACACATCTCCAGAAGAGTCAAGTGTTGCACTGCCGCTGCTCTaGCTGCTGCACGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: RLGLFLGPGDTSPEESSVALPLL*LLHVQV
Trigger: AACCTGCACGTGCAGCAGCAAGAGCAGCGGCAGTGC...AACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TCTGGTGAGGTTGCCTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACAGACCATTCTCCAGTTaGTGTCGGTGCTTCACGTAC +
Preference number: 5 (lower is better)
Translates to: SGEVACRVYASRARRRRNRPFSS*CRCFTY
Trigger: GTACGTGAAGCACCGACACAAACTGGAGAATGGTCT...GTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAGGCAACCTCACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp ACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGTCTGCCACGGGCCTCTaGTTCCCGGAGCAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: TQGGHVILFTGNQLRHQPSATGL*FPEQLY
Trigger: GTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGA...CGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGCCCCGGCTGGGGCTGTTTCTaGGTCCTGGGGACACATCTC +
Preference number: 5 (lower is better)
Translates to: RNHNSKQSPLSPMFSVSPGWGCF*VLGTHL
Trigger: GAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCC...GGGGCTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CAGGTGCCCCGAAGTTCAGGCGTCAGCTCAGGCCCAGGGGGTGGCACTGGCTCAACACCCTCCTATTGTTaGCATAGCTTCATTGCTTGT +
Preference number: 5 (lower is better)
Translates to: QVPRSSGVSSGPGGGTGSTPSYC*HSFIAC
Trigger: ACAAGCAATGAAGCTATGCAAACAATAGGAGGGTGT...TGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACGCCTGAACTTCGGGGCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTCCTGAGGACCTCATTTaGAGAACTGCTGGACTGTGC +
Preference number: 5 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCPEDLI*RTAGLC
Trigger: GCACAGTCCAGCAGTTCTCAAAATGAGGTCCTCAGG...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS TCA 90 bp TGGAATGACCCTCAGTCTCACAGAGGGCCTCCCAGCCAGTCCCACTaGTTTGGGGACGAGATGCCTTTCCTGACTTTCCACCATACCTCC +
Preference number: 5 (lower is better)
Translates to: WNDPQSHRGPPSQSH*FGDEMPFLTFHHTS
Trigger: GGAGGTATGGTGGAAAGTCAGGAAAGGCATCTCGTCCCCAAATCAGTGGGACTGGCTGGGAGGCCCTCTGTGAGACTGAGGGTCATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554514.1
CDS GCA 90 bp AGTCAAAGGGGTTGGGGATGGGAGAGAAAGGGTAAGGGCCTGTGTTaGTCACGAAGGATGCCCAGTGACAGCCCTTGTCCTCTTGCCTGT +
Preference number: 5 (lower is better)
Translates to: SQRGWGWERKGKGLC*SRRMPSDSPCPLAC
Trigger: ACAGGCAAGAGGACAAGGGCTGTCACTGGGCATCCTTCGTGAGCAACACAGGCCCTTACCCTTTCTCTCCCATCCCCAACCCCTTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS-3UTR CAA 90 bp CTGCAGAGTGTATGCCTCTCGTGCACGCCGCCGCCGAAACCACAACTCAAAGCAACCATGAGGCCCTCTTaGTGCACAAATCGTGGACAG +
Preference number: 5 (lower is better)
Translates to: LQSVCLSCTPPPKPQLKATMRPS*CTNRGQ
Trigger: CTGTCCACGATTTGTGCACAAAGAGGGCCTCATGGT...TGCTTTGAGTTGTGGTTTCGGCGGCGGCGTGCACGAGAGGCATACACTCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGACCTTCTGCAGTGGCTaGGGCATTCCCACTGCCTCC +
Preference number: 5 (lower is better)
Translates to: RRHQARETRDSGGRAILWTFCSG*GIPTAS
Trigger: GGAGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGT...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTTGCTGCACGTGCAGGTaGGAGAGGCGCACAAGCTGG +
Preference number: 5 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCCCTCR*ERRTSW
Trigger: CCAGCTTGTGCGCCTCTCCAACCTGCACGTGCAGCA...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AACAGGAGGAGATGCTCGAAGAGAAAGACATGGCGAAGGCACTTCTTTCGGCCATCTGCCACGGGCCTCTaGTTCCCGGAGCAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: NRRRCSKRKTWRRHFFRPSATGL*FPEQLY
Trigger: GTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGA...TGGCCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AGAGGGATAACTTCCCCACCTCCAGGGTATGAAGGCAAGCAATGTGGCTGCTCTGGCTGGGGCTGTTTCTaGGTCCTGGGGACACATCTC +
Preference number: 5 (lower is better)
Translates to: RGITSPPPGYEGKQCGCSGWGCF*VLGTHL
Trigger: GAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCC...AGAGCAGCCACATTGCTTGCCTTCATACCCTGGAGGTGGGGAAGTTATCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGAGAGGAACCCTAAACTGAAGTaGGCTCAAGGCAGGAATGAG +
Preference number: 5 (lower is better)
Translates to: AQGSIMPHCHPSPKCAERNPKLK*AQGRNE
Trigger: CTCATTCCTGCCTTGAGCCAACTTCAGTTTAGGGTT...CCTCTCAGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR CAA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGCCTGTTGGCCGGTCCTaGTTGATGCCTTGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: RRHQARETRDSGGRAILWPVGRS*LMPCSH
Trigger: GTGGCTACAAGGCATCAACAAGGACCGGCCAACAGG...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCTGCTGACCATGAGGCCCTCTTaGTGCACAAATCGTGGACAG +
Preference number: 5 (lower is better)
Translates to: GGHVILFTGNQLRHQPLLTMRPS*CTNRGQ
Trigger: CTGTCCACGATTTGTGCACAAAGAGGGCCTCATGGT...CAGCAGCGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGAGCCTTCAGCATCTGTaGGGCTCCCCCTCACGGGCA +
Preference number: 5 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAESLQHL*GSPSRA
Trigger: TGCCCGTGAGGGGGAGCCCAACAGATGCTGAAGGCT...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CAA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACGAAGCTTGTGCTCACTaGGTGAGGGCAGATTGCCAA +
Preference number: 5 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHEACAH*VRADCQ
Trigger: TTGGCAATCTGCCCTCACCAAGTGAGCACAAGCTTC...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS-3UTR CAA 90 bp CAGGAAGCAGAGGGAAGAAATTCAGCGATCGCCCAGGGCTCCATTATGCCCCACGGAGGTAATGAAGAGTaGTGTTCAGCGTGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: QEAEGRNSAIAQGSIMPHGGNEE*CSACLG
Trigger: CCCGAGACACGCTGAACACAACTCTTCATTACCTCC...GTGGGGCATAATGGAGCCCTGGGCGATCGCTGAATTTCTTCCCTCTGCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CCCTTGCTTAAGGGACTGAGCGCAGCCAGACCATTCTCCAGTTTGTGTCGGTGCTGCAGCTCCTCTGGCTaGGCCACTCTTTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: PLLKGLSAARPFSSLCRCCSSSG*ATLFRS
Trigger: TGATCTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCA...GCACCGACACAAACTGGAGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AGCTCCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAAAGACCATTCTCCAGTTaGTGTCGGTGCTTCACGTAC +
Preference number: 5 (lower is better)
Translates to: SSCQPSKALIHPFMCLLERPFSS*CRCFTY
Trigger: GTACGTGAAGCACCGACACAAACTGGAGAATGGTCT...TTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CCCATTCATGTGCCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATGGAGGCGTTTGCATAGCTTCATaGCTTGTGACACCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: PIHVPAGRSAVAAGPDGGVCIAS*LVTPQN
Trigger: ATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAAC...GCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGCACATGAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCGTCCTGCTTCCCTCTTaGGGTCCTTCTGTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCVLLPS*GPSVRK
Trigger: TTTCCTGACAGAAGGACCCAAAGAGGGAAGCAGGAC...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS TCA 90 bp GGCCTCCCAGCCAGTCCCACTGATTTGGGGACGAGATGCCTTTCCTaGCTTTCCACCATACCTCCCCTTTGTATCCTCATTGTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: GLPASPTDLGTRCLS*LSTIPPLCILIVKV
Trigger: GACCTTGACAATGAGGATACAAAGGGGAGGTATGGTGGAAAGTCAGGAAAGGCATCTCGTCCCCAAATCAGTGGGACTGGCTGGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554514.1
CDS-3UTR CAA 90 bp AGCTCCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAATTTCTTCTGTTTCCTTaGCCTGTTCTCCGAGGGGTA +
Preference number: 5 (lower is better)
Translates to: SSCQPSKALIHPFMCLLEFLLFP*PVLRGV
Trigger: TACCCCTCGGAGAACAGGCAAAGGAAACAGAAGAAA...TTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGCCCCATTGCCAAGGGCTTCTaGGTGGCTGGCATCTTCCTT +
Preference number: 5 (lower is better)
Translates to: RNHNSKQSPLSPMFSVSPIAKGF*VAGIFL
Trigger: AAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAAT...GGGGCTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CCTGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTGCCTGCTGGAAGAAGTTCTCGCCTGCTGTTTaGAGCTCTTTTGGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: PASRAKPSSTHSCACWKKFSPAV*SSFGSD
Trigger: ATCTGAGCCAAAAGAGCTCAAAACAGCAGGCGAGAA...CTTCTTCCAGCAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR CAA 90 bp GTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAAAAGAGTGCACTCGGAGCTCCTaGTTGTGGGCTGCCTGTCTC +
Preference number: 5 (lower is better)
Translates to: VDLAEMILLRESQGVRKECTRSS*LWAACL
Trigger: GAGACAGGCAGCCCACAACAAGGAGCTCCGAGTGCA...CTCTTTTCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp ACTCAAGGTGGCCACGTAATCTTGTTCACAGGCAATCAGCTCAGACACCAGCCGCGCTCCCCAAGGGCTTaGATGTCCAGGAAGGGTTTA +
Preference number: 5 (lower is better)
Translates to: TQGGHVILFTGNQLRHQPRSPRA*MSRKGL
Trigger: TAAACCCTTCCTGGACATCAAAGCCCTTGGGGAGCG...CGGCTGGTGTCTGAGCTGATTGCCTGTGAACAAGATTACGTGGCCACCTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTGCTGTTTGCATAGCTTCATaGCTTGTGACACCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: AIAQGSIMPHCHPSPKCAVCIAS*LVTPQN
Trigger: ATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAAC...AGCACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS TCA 90 bp TTCCTCCTTAACCAGGTGGCATTCTGGAAGCTTGTGCTCACTTGGTaGGGGCAGATTGCCAAGGGCTTCTTGGTGGCTGGCATCTTCCTT +
Preference number: 5 (lower is better)
Translates to: FLLNQVAFWKLVLTW*GQIAKGFLVAGIFL
Trigger: AAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGTGAGCACAAGCTTCCAGAATGCCACCTGGTTAAGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS TCA 90 bp AGTCCTGTTTCCCTTCACCCACTGATGCCCACTGACCCGTCAGGATaGGGAATCCAGATGCCATCAAGTCCCAAGCTACATCAGGGTGAT +
Preference number: 5 (lower is better)
Translates to: SPVSLHPLMPTDPSG*GIQMPSSPKLHQGD
Trigger: ATCACCCTGATGTAGCTTGGGACTTGATGGCATCTGGATTCCTCATCCTGACGGGTCAGTGGGCATCAGTGGGTGAAGGGAAACAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555038.5
ENST00000555052.1
CDS GCA 90 bp GAGCCTTCATATTCCTCCTTAACCAGGTGGCATTCTGGAAGCTTGTaGTCACTTGGTGAGGGCAGATTGCCAAGGGCTTCTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: EPSYSSLTRWHSGSL*SLGEGRLPRASWWL
Trigger: CAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGTGAGCACAAGCTTCCAGAATGCCACCTGGTTAAGGAGGAATATGAAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS GCA 90 bp TGCCATCAAGTCCCAAGCTACATCAGGGTGATCAGAGACGGAGACTaGAAGGGCCTCTTCTGGAATGTTGTCCCCTTTTCCTTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: CHQVPSYIRVIRDGD*KGLFWNVVPFSFLH
Trigger: GTGCAGGAAGGAAAAGGGGACAACATTCCAGAAGAGGCCCTTGCAGTCTCCGTCTCTGATCACCCTGATGTAGCTTGGGACTTGATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
ENST00000556399.5
CDS-3UTR CAA 90 bp CCCTTGCTTAAGGGACTGAGCGCAGCCAGACCATTCTCCAGTTTGTGTCGGTGCTTTCTTCTGTTTCCTTaGCCTGTTCTCCGAGGGGTA +
Preference number: 5 (lower is better)
Translates to: PLLKGLSAARPFSSLCRCFLLFP*PVLRGV
Trigger: TACCCCTCGGAGAACAGGCAAAGGAAACAGAAGAAA...GCACCGACACAAACTGGAGAATGGTCTGGCTGCGCTCAGTCCCTTAAGCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AACAGGAGGAGATGCTCGAAGAGAAAGACATGGCGAAGGCACTTCTTTCGGCCATGGCATTCTGGAAGCTaGTGCTCACTTGGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: NRRRCSKRKTWRRHFFRPWHSGS*CSLGEG
Trigger: GCCCTCACCAAGTGAGCACAAGCTTCCAGAATGCCA...TGGCCGAAAGAAGTGCCTTCGCCATGTCTTTCTCTTCGAGCATCTCCTCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS-3UTR CAA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCTTCTCGCCTGCTGTTTaGAGCTCTTTTGGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCFSPAV*SSFGSD
Trigger: ATCTGAGCCAAAAGAGCTCAAAACAGCAGGCGAGAA...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CAA 90 bp GCCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCACTTGTCCACTTGAGTTaGATCTCTGGTGAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: AAETTTQSRVRCPRCFLSLVHLS*ISGEVA
Trigger: GGCAACCTCACCAGAGATCAAACTCAAGTGGACAAG...TGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TCAGCGATCGCCCAGGGCTCCATTATGCCCCACTGCCATCCCAGCCCAAAGTGTATAGAACTTGTCCACTaGAGTTTGATCTCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: SAIAQGSIMPHCHPSPKCIELVH*SLISGE
Trigger: CTCACCAGAGATCAAACTCAAGTGGACAAGTTCTAT...ACACTTTGGGCTGGGATGGCAGTGGGGCATAATGGAGCCCTGGGCGATCGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GGCCCTGTAGACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGGCCAGGGAAATTTGCTaGACGTCCAGATCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GPVDVAIFGTIPVIPIAEAREIC*TSRSQA
Trigger: GGCCTGGGATCTGGACGTCAAGCAAATTTCCCTGGC...CTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTCTACAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CAA 90 bp GAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACCTCCTCTGTTGGGGCCAGGGAAATTaGCTTGACGTCCAGATCCCA +
Preference number: 5 (lower is better)
Translates to: ETRDSGGRAILWSLDLLCWGQGN*LDVQIP
Trigger: TGGGATCTGGACGTCAAGCAAATTTCCCTGGCCCCA...ACAGAGGAGGTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS TCA 90 bp GCCCACAGGCTTCAGAGAGCTGAGGCTCTTTCTCGCCTGCTGTTTTaGGCTCTTTTGGCTCAGATTCTGGCTTCCCTGAGCCTTCATATT +
Preference number: 5 (lower is better)
Translates to: AHRLQRAEALSRLLF*ALLAQILASLSLHI
Trigger: AATATGAAGGCTCAGGGAAGCCAGAATCTGAGCCAAAAGAGCTCAAAACAGCAGGCGAGAAAGAGCCTCAGCTCTCTGAAGCCTGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS GCA 90 bp CCCAATGCCCGTCACTCTCCTGTTTTCTCACTGTTCCACCATCACTaGCTAACCATGTCACTCGGAGTTGGTATGGAGATGGAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: PNARHSPVFSLFHHH*LTMSLGVGMEMEEP
Trigger: AGGCTCTTCCATCTCCATACCAACTCCGAGTGACATGGTTAGGCAGTGATGGTGGAACAGTGAGAAAACAGGAGAGTGACGGGCATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS-3UTR CAA 90 bp CATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGGGACTCCAGTTGGTTGGCCGGTCCTTGTaGATGCCTTGTAGCCACTCA +
Preference number: 5 (lower is better)
Translates to: HSFIACDTSEWSHQGLQLVGRSL*MPCSHS
Trigger: TGAGTGGCTACAAGGCATCAACAAGGACCGGCCAAC...CAACTGGAGTCCCTGGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTCGTTAGACACCATGAGGCCCTCTTaGTGCACAAATCGTGGACAG +
Preference number: 5 (lower is better)
Translates to: QARETRDSGGRAILWSLDTMRPS*CTNRGQ
Trigger: CTGTCCACGATTTGTGCACAAAGAGGGCCTCATGGT...GTCTAACGACCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGTCTCCAGCGGAGGTGTaGGAGTGTCAGACAGGGGGC +
Preference number: 5 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRSPAEV*ECQTGG
Trigger: GCCCCCTGTCTGACACTCCAACACCTCCGCTGGAGA...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CAA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGCCCCCTTCAGGGCCCTaGAGCTTGCTGAACAGGAGG +
Preference number: 5 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRPPSGP*SLLNRR
Trigger: CCTCCTGTTCAGCAAGCTCAAGGGCCCTGAAGGGGG...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CAA 90 bp AGAAGGCACCAAGCTAGGGAGACTAGAGATAGTGGTGGCAGGGCAATACTCTGGTTCCTGTCATCCCTATaGCAGAGTCGTGTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: RRHQARETRDSGGRAILWFLSSL*QSRVPN
Trigger: ATTGGGGACACGACTCTGCAATAGGGATGACAGGAA...CCAGAGTATTGCCCTGCCACCACTATCTCTAGTCTCCCTAGCTTGGTGCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS CCA 90 bp TCAGATTCTGGCTTCCCTGAGCCTTCATATTCCTCCTTAACCAGGTaGCATTCTGGAAGCTTGTGCTCACTTGGTGAGGGCAGATTGCCA +
Preference number: 5 (lower is better)
Translates to: SDSGFPEPSYSSLTR*HSGSLCSLGEGRLP
Trigger: TGGCAATCTGCCCTCACCAAGTGAGCACAAGCTTCCAGAATGCCACCTGGTTAAGGAGGAATATGAAGGCTCAGGGAAGCCAGAATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS-3UTR CAA 90 bp CCTCCTATTGTTTGCATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCACAGGGTGGGGGCTGTaGCCTCAAAGGGTGGATACA +
Preference number: 5 (lower is better)
Translates to: PPIVCIASLLVTPQNGVTTGWGL*PQRVDT
Trigger: TGTATCCACCCTTTGAGGCAACAGCCCCCACCCTGT...GGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTCCAGGGGCCAGACACTaGAGTGCTAGTCGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAPGARH*SASRGA
Trigger: AGCACCCCGACTAGCACTCAAGTGTCTGGCCCCTGG...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GACGTCGCTATTTTTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCATTGCCAAGGGCTTCTaGGTGGCTGGCATCTTCCTT +
Preference number: 5 (lower is better)
Translates to: DVAIFGTIPVIPIAESCPIAKGF*VAGIFL
Trigger: AAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAAT...GGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAAAAATAGCGACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CAA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGACCTTCTGCAGTGGCTaGGGCATTCCCACTGCCTCC +
Preference number: 5 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLTFCSG*GIPTAS
Trigger: GGAGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGT...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp GTCGTGTCCCCAATAAACAGGTGTCTTGAGGCACAGGGCCCTGTGTCTGTCTGCATAGAACTTGTCCACTaGAGTTTGATCTCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: VVSPINRCLEAQGPVSVCIELVH*SLISGE
Trigger: CTCACCAGAGATCAAACTCAAGTGGACAAGTTCTAT...GCAGACAGACACAGGGCCCTGTGCCTCAAGACACCTGTTTATTGGGGACACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CAA 90 bp GGACCTTCCAGTCTTGGTTTTATTTTCTGTGTTCTAGTTAAGGGCTGGTTGAGGACTCGGAGCTCCTTGTaGTGGGCTGCCTGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: GPSSLGFIFCVLVKGWLRTRSSL*WAACLH
Trigger: GTGGAGACAGGCAGCCCACAACAAGGAGCTCCGAGT...CCTCAACCAGCCCTTAACTAGAACACAGAAAATAAAACCAAGACTGGAAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CAA 90 bp TTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCCAATAAACAGGTGCGCTCCCCAAGGGCTTaGATGTCCAGGAAGGGTTTA +
Preference number: 5 (lower is better)
Translates to: LVRFLSSLLQSRVPNKQVRSPRA*MSRKGL
Trigger: TAAACCCTTCCTGGACATCAAAGCCCTTGGGGAGCG...CACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS TCA 90 bp CTCGCCTGCTGTTTTGAGCTCTTTTGGCTCAGATTCTGGCTTCCCTaGGCCTTCATATTCCTCCTTAACCAGGTGGCATTCTGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: LACCFELFWLRFWLP*AFIFLLNQVAFWKL
Trigger: AAGCTTCCAGAATGCCACCTGGTTAAGGAGGAATATGAAGGCTCAGGGAAGCCAGAATCTGAGCCAAAAGAGCTCAAAACAGCAGGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS-3UTR CAA 90 bp TGTCTCCACAGCAGCTGGGCAATAGAACTTGTCCACTTGAGTTTGATCTCTGGTGCCTCTTCTGGAATGTaGTCCCCTTTTCCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: CLHSSWAIELVHLSLISGASSGM*SPFPSC
Trigger: GCAGGAAGGAAAAGGGGACAACATTCCAGAAGAGGC...ACCAGAGATCAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CCGCCGAAACCACAACTCAAAGCAGAGTCCGCTGTCCCCGATGTTTTCTGTCAGATAGAACTTGTCCACTaGAGTTTGATCTCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: PPKPQLKAESAVPDVFCQIELVH*SLISGE
Trigger: CTCACCAGAGATCAAACTCAAGTGGACAAGTTCTAT...CTGACAGAAAACATCGGGGACAGCGGACTCTGCTTTGAGTTGTGGTTTCGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TGGCGAAGGCACTTCTTTCGGCCACAGATGACAGTGAAGGGGTCTCGATGCAAGACACCCTCCTATTGTTaGCATAGCTTCATTGCTTGT +
Preference number: 5 (lower is better)
Translates to: WRRHFFRPQMTVKGSRCKTPSYC*HSFIAC
Trigger: ACAAGCAATGAAGCTATGCAAACAATAGGAGGGTGT...CTTGCATCGAGACCCCTTCACTGTCATCTGTGGCCGAAAGAAGTGCCTTCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553709.5
ENST00000556399.5
CDS GCA 90 bp GGTGTGACTTCCTCCTCAGATATCTGGCTCTTCTCTCCAATATGTTaGATCCTGGCTGTTTGGCATCCCAGCTGCCTAATTTCTACTCTG +
Preference number: 5 (lower is better)
Translates to: GVTSSSDIWLFSPIC*ILAVWHPSCLISTL
Trigger: CAGAGTAGAAATTAGGCAGCTGGGATGCCAAACAGCCAGGATGCAACATATTGGAGAGAAGAGCCAGATATCTGAGGAGGAAGTCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS-3UTR CAA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCAACAGGGTGGGGGCTGTaGCCTCAAAGGGTGGATACA +
Preference number: 5 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASTGWGL*PQRVDT
Trigger: TGTATCCACCCTTTGAGGCAACAGCCCCCACCCTGT...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGGCAAGCAGGTGCTaGGCTGGTACCAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASLASRC*AGTRKS
Trigger: GGACTTCCTGGTACCAGCCAAGCACCTGCTTGCCAA...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCACTTGGTGAGGGCAGATaGCCAAGGGCTTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: YIKSTVPLSHPPIVCIASLGEGR*PRASWW
Trigger: CCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAG...TGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CCTCCTATTGTTTGCATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCGCCTCTTCTGGAATGTaGTCCCCTTTTCCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: PPIVCIASLLVTPQNGVTASSGM*SPFPSC
Trigger: GCAGGAAGGAAAAGGGGACAACATTCCAGAAGAGGC...GGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGGCTGGCATCTTCCTaGTCCCCAGGGCTCAGTGGG +
Preference number: 5 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYWLASS*SPGLSG
Trigger: CCCACTGAGCCCTGGGGACAAGGAAGATGCCAGCCA...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGATTGCCAAGGGCTTCTaGGTGGCTGGCATCTTCCTT +
Preference number: 5 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLIAKGF*VAGIFL
Trigger: AAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAAT...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp ATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTTCATTGTGCAGCTCCTCTGGCTaGGCCACTCTTTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: IKSTVPLSHPPIVCIASLCSSSG*ATLFRS
Trigger: TGATCTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCA...CAATGAAGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp CCTCCTATTGTTTGCATAGCTTCATTGCTTGTGACACCTCAGAATGGAGTCACCAGACCATTCTCCAGTTaGTGTCGGTGCTTCACGTAC +
Preference number: 5 (lower is better)
Translates to: PPIVCIASLLVTPQNGVTRPFSS*CRCFTY
Trigger: GTACGTGAAGCACCGACACAAACTGGAGAATGGTCT...GGTGACTCCATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAACAATAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTCTGCCACGGGCCTCTaGTTCCCGGAGCAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSSATGL*FPEQLY
Trigger: GTACAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGA...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp ACTCCAGTTGACCTGGCAGAGATGATTCTTCTCAGGGAAAGTCAGGGGGTGAGAGTTTGCATAGCTTCATaGCTTGTGACACCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: TPVDLAEMILLRESQGVRVCIAS*LVTPQN
Trigger: ATTCTGAGGTGTCACAAGCAATGAAGCTATGCAAAC...TCTCACCCCCTGACTTTCCCTGAGAAGAATCATCTCTGCCAGGTCAACTGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTGGAGGTAATGAAGAGTaGTGTTCAGCGTGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIAGGNEE*CSACLG
Trigger: CCCGAGACACGCTGAACACAACTCTTCATTACCTCC...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATACCTTCTGCAGTGGCTaGGGCATTCCCACTGCCTCC +
Preference number: 5 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYTFCSG*GIPTAS
Trigger: GGAGGCAGTGGGAATGCCCAAGCCACTGCAGAAGGT...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATCCTGTTGGCCGGTCCTaGTTGATGCCTTGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYPVGRS*LMPCSH
Trigger: GTGGCTACAAGGCATCAACAAGGACCGGCCAACAGG...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp ACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTGTTTGCATAGCTCTTGTCCACTTGAGTTaGATCTCTGGTGAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: TYIKSTVPLSHPPIVCIALVHLS*ISGEVA
Trigger: GGCAACCTCACCAGAGATCAAACTCAAGTGGACAAG...AGCTATGCAAACAATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp TTGGTACGATTCCTGTCATCCCTATTGCAGAGTCGTGTCCCCAATAAACAGGTGACACCCTCCTATTGTTaGCATAGCTTCATTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LVRFLSSLLQSRVPNKQVTPSYC*HSFIAC
Trigger: ACAAGCAATGAAGCTATGCAAACAATAGGAGGGTGT...CACCTGTTTATTGGGGACACGACTCTGCAATAGGGATGACAGGAATCGTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298694.9
CDS-3UTR CAA 90 bp TATAATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCCTGGGCCTGTGTGTCTaGGTGAGGGCAGATTGCCAA +
Preference number: 5 (lower is better)
Translates to: YNNSNYIYKVYGSPVTPSLGLCV*VRADCQ
Trigger: TTGGCAATCTGCCCTCACCAAGACACACAGGCCCAG...GGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS TCA 90 bp TTACTCCTTCTGTTGACTATCACAACATGGATGGCAATGATGGTGTaGCTTCCTCCTCAGATATCTGGCTCTTCTCTCCAATATGTTGCA +
Preference number: 5 (lower is better)
Translates to: LLLLLTITTWMAMMV*LPPQISGSSLQYVA
Trigger: TGCAACATATTGGAGAGAAGAGCCAGATATCTGAGGAGGAAGTCACACCATCATTGCCATCCATGTTGTGATAGTCAACAGAAGGAGTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS-3UTR CAA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATGGTGGCCACGTAATCTaGTTCACAGGCAATCAGCTC +
Preference number: 5 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYGGHVI*FTGNQL
Trigger: GAGCTGATTGCCTGTGAACAAGATTACGTGGCCACC...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS-3UTR CAA 90 bp AATAACAGTAATTACATATATAAAGTCTACGGTTCCCCTGTCACACCCTCCTATTTTCTTCTGTTTCCTTaGCCTGTTCTCCGAGGGGTA +
Preference number: 5 (lower is better)
Translates to: NNSNYIYKVYGSPVTPSYFLLFP*PVLRGV
Trigger: TACCCCTCGGAGAACAGGCAAAGGAAACAGAAGAAA...ATAGGAGGGTGTGACAGGGGAACCGTAGACTTTATATATGTAATTACTGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000556399.5
CDS CCA 72 bp TCCGGTGGCGGCCCTTCCCTCCAGCGCCCTTGCGGGTaGGTACCGTCCGGACTCTGGAGAGGCCTGGGGAGC +
Preference number: 6 (lower is better)
Translates to: SGGGPSLQRPCG*VPSGLWRGLGS
Trigger: GCTCCCCAGGCCTCTCCAGAGTCCGGACGGTACCCACCCGCAAGGGCGCTGGAGGGAAGGGCCGCCACCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS GCA 72 bp GGTGTCTCCGGTGGCGGCCCTTCCCTCCAGCGCCCTTaGGGGTGGGTACCGTCCGGACTCTGGAGAGGCCTG +
Preference number: 6 (lower is better)
Translates to: GVSGGGPSLQRP*GWVPSGLWRGL
Trigger: CAGGCCTCTCCAGAGTCCGGACGGTACCCACCCGCAAGGGCGCTGGAGGGAAGGGCCGCCACCGGAGACACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 72 bp AGGCCCTTCTGGTGCATCCACGCCCGGTGTCTCCGGTaGCGGCCCTTCCCTCCAGCGCCCTTGCGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: RPFWCIHARCLR*RPFPPAPLRVG
Trigger: ACCCACCCGCAAGGGCGCTGGAGGGAAGGGCCGCCACCGGAGACACCGGGCGTGGATGCACCAGAAGGGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CAA 72 bp CGGTGTCTCCGGTGGCGGCCCTTCCCTCCAGCGCCCTaGCGGGTGGGTACCGTCCGGACTCTGGAGAGGCCT +
Preference number: 6 (lower is better)
Translates to: RCLRWRPFPPAP*RVGTVRTLERP
Trigger: AGGCCTCTCCAGAGTCCGGACGGTACCCACCCGCAAGGGCGCTGGAGGGAAGGGCCGCCACCGGAGACACCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 72 bp CTCCAGCGCCCTTGCGGGTGGGTACCGTCCGGACTCTaGAGAGGCCTGGGGAGCCTTCAGCATCTGTTGGGC +
Preference number: 6 (lower is better)
Translates to: LQRPCGWVPSGL*RGLGSLQHLLG
Trigger: GCCCAACAGATGCTGAAGGCTCCCCAGGCCTCTCCAGAGTCCGGACGGTACCCACCCGCAAGGGCGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 72 bp GTCTCGGGAGGGTGGGGGCTCCTCAGGAGGGCACGGTaGGGTAATGGTCAGCAGAGCTCGCCCACTCTGGTC +
Preference number: 6 (lower is better)
Translates to: VSGGWGLLRRAR*GNGQQSSPTLV
Trigger: GACCAGAGTGGGCGAGCTCTGCTGACCATTACCCCACCGTGCCCTCCTGAGGAGCCCCCACCCTCCCGAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555052.1
ENST00000556399.5
CDS GCA 72 bp AGCCTCTGCTGGGGGCTCAGACACCTCCAAGACTGCTaGCTCTGGGACAGCCTCAGCTCCTGGGGGAGACTC +
Preference number: 6 (lower is better)
Translates to: SLCWGLRHLQDC*LWDSLSSWGRL
Trigger: GAGTCTCCCCCAGGAGCTGAGGCTGTCCCAGAGGCAGCAGTCTTGGAGGTGTCTGAGCCCCCAGCAGAGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 72 bp CAGCGCCTCCTCAGGAAGTGGAGGGCTGGGAAGCCCTaGAGGTCCAGAGGGCAGTTCTGGGGGCAGTGTACT +
Preference number: 6 (lower is better)
Translates to: QRLLRKWRAGKP*RSRGQFWGQCT
Trigger: AGTACACTGCCCCCAGAACTGCCCTCTGGACCTCCAGGGCTTCCCAGCCCTCCACTTCCTGAGGAGGCGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 72 bp GGGGCAAGATCCGGAGGCTTCTCCCACAGCCTCTGCTaGGGGCTCAGACACCTCCAAGACTGCTGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: GARSGGFSHSLC*GLRHLQDCCLW
Trigger: CCAGAGGCAGCAGTCTTGGAGGTGTCTGAGCCCCCAGCAGAGGCTGTGGGAGAAGCCTCCGGATCTTGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CAA 72 bp CCACCTGGAACACCTGGCCCAACAGGGTGGGGGCTGTaGCCTCAAAGGGTGGATACAGGGCGGCGAGAGTGC +
Preference number: 6 (lower is better)
Translates to: PPGTPGPTGWGL*PQRVDTGRREC
Trigger: GCACTCTCGCCGCCCTGTATCCACCCTTTGAGGCAACAGCCCCCACCCTGTTGGGCCAGGTGTTCCAGGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555232.5
ENST00000556399.5
CDS CCA 72 bp GTGGGGTGCTGGTGTGGGAAAGCCCTCTTGGCTCCCTaGAATGACCCTCAGTCTCACAGAGGGCCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: VGCWCGKALLAP*NDPQSHRGPPS
Trigger: GCTGGGAGGCCCTCTGTGAGACTGAGGGTCATTCCAGGGAGCCAAGAGGGCTTTCCCACACCAGCACCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554514.1
CDS CCA 72 bp ACCTGCTGGAAGAAGCGCTGTAGCCGCAGGGCCCGATaGAGGCCACTCTCAACCTGCTCCAGCCGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: TCWKKRCSRRAR*RPLSTCSSRCS
Trigger: TGAACAGCGGCTGGAGCAGGTTGAGAGTGGCCTCCATCGGGCCCTGCGGCTACAGCGCTTCTTCCAGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS CAA 72 bp GGACTCTGGAGAGGCCTGGGGAGCCTTCAGCATCTGTaGGGCTCCCCCTCACGGGCAGCGTCACCTCTAACA +
Preference number: 6 (lower is better)
Translates to: GLWRGLGSLQHL*GSPSRAASPLT
Trigger: TGTTAGAGGTGACGCTGCCCGTGAGGGGGAGCCCAACAGATGCTGAAGGCTCCCCAGGCCTCTCCAGAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CAA 90 bp TCCTCTCCACCACCTGGAACACCTGGCCCAACAGGGTGGGGGCTGTaGCCTCAAAGGGTGGATACAGGGCGGCGAGAGTGCTCTGCACAC +
Preference number: 6 (lower is better)
Translates to: SSPPPGTPGPTGWGL*PQRVDTGRRECSAH
Trigger: GTGTGCAGAGCACTCTCGCCGCCCTGTATCCACCCTTTGAGGCAACAGCCCCCACCCTGTTGGGCCAGGTGTTCCAGGTGGTGGAGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555232.5
ENST00000556399.5
CDS CAA 90 bp GTACCGTCCGGACTCTGGAGAGGCCTGGGGAGCCTTCAGCATCTGTaGGGCTCCCCCTCACGGGCAGCGTCACCTCTAACAGCTCCACAT +
Preference number: 6 (lower is better)
Translates to: VPSGLWRGLGSLQHL*GSPSRAASPLTAPH
Trigger: ATGTGGAGCTGTTAGAGGTGACGCTGCCCGTGAGGGGGAGCCCAACAGATGCTGAAGGCTCCCCAGGCCTCTCCAGAGTCCGGACGGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CAA 90 bp TCTAACAGCTCCACATACTCGCCCTCAGGTCCTTCCACAGGGGCATaGTGCCCATCCCCAGGACTCCGGGTACCCAGCGCCTCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: SNSSTYSPSGPSTGA*CPSPGLRVPSASSG
Trigger: TCCTGAGGAGGCGCTGGGTACCCGGAGTCCTGGGGATGGGCACAATGCCCCTGTGGAAGGACCTGAGGGCGAGTATGTGGAGCTGTTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS TCA 72 bp GTGCTGGTGTGGGAAAGCCCTCTTGGCTCCCTGGAATaGCCCTCAGTCTCACAGAGGGCCTCCCAGCCAGTC +
Preference number: 6 (lower is better)
Translates to: VLVWESPLGSLE*PSVSQRASQPV
Trigger: GACTGGCTGGGAGGCCCTCTGTGAGACTGAGGGTCATTCCAGGGAGCCAAGAGGGCTTTCCCACACCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554514.1
CDS TCA 72 bp GGTCAGCAGAGCTCGCCCACTCTGGTCCACCCCTCCTaGAGACACAAAATGGCCAGGCTGTCCTGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: GQQSSPTLVHPS*RHKMARLSWLG
Trigger: TCCCAGCCAGGACAGCCTGGCCATTTTGTGTCTTCAGGAGGGGTGGACCAGAGTGGGCGAGCTCTGCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555052.1
CDS GCA 72 bp GCCTCAAAGGGTGGATACAGGGCGGCGAGAGTGCTCTaGACACAGTCCTCCACTGGCTCAGGCTCCATGGCT +
Preference number: 6 (lower is better)
Translates to: ASKGGYRAARVL*TQSSTGSGSMA
Trigger: AGCCATGGAGCCTGAGCCAGTGGAGGACTGTGTGCAGAGCACTCTCGCCGCCCTGTATCCACCCTTTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555232.5
ENST00000556399.5
CDS CCA 72 bp GGCTTCCTGCTGGACCTTGGCAAGCAGGTGCTTGGCTaGTACCAGGAAGTCCAGCGTGTACCTCAGTGCGTC +
Preference number: 6 (lower is better)
Translates to: GFLLDLGKQVLG*YQEVQRVPQCV
Trigger: GACGCACTGAGGTACACGCTGGACTTCCTGGTACCAGCCAAGCACCTGCTTGCCAAGGTCCAGCAGGAAGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 72 bp CCCTTTTCCTTCCTGCACAGTCTCCAGCGGAGGTGTTaGAGTGTCAGACAGGGGGCCTTCTGGGCCTGTGTG +
Preference number: 6 (lower is better)
Translates to: PFSFLHSLQRRC*SVRQGAFWACV
Trigger: CACACAGGCCCAGAAGGCCCCCTGTCTGACACTCCAACACCTCCGCTGGAGACTGTGCAGGAAGGAAAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
ENST00000556399.5
CDS CAA 90 bp CTGTATTGGGCACAGGCTTCCTGCTGGACCTTGGCAAGCAGGTGCTaGGCTGGTACCAGGAAGTCCAGCGTGTACCTCAGTGCGTCCTCC +
Preference number: 6 (lower is better)
Translates to: LYWAQASCWTLASRC*AGTRKSSVYLSASS
Trigger: GGAGGACGCACTGAGGTACACGCTGGACTTCCTGGTACCAGCCAAGCACCTGCTTGCCAAGGTCCAGCAGGAAGCCTGTGCCCAATACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 72 bp TCACTTGGTGAGGGCAGATTGCCAAGGGCTTCTTGGTaGCTGGCATCTTCCTTGTCCCCAGGGCTCAGTGGG +
Preference number: 6 (lower is better)
Translates to: SLGEGRLPRASW*LASSLSPGLSG
Trigger: CCCACTGAGCCCTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS CCA 72 bp GTAATGAAGAGTTGTGTTCAGCGTGTCTCGGGAGGGTaGGGGCTCCTCAGGAGGGCACGGTGGGGTAATGGT +
Preference number: 6 (lower is better)
Translates to: VMKSCVQRVSGG*GLLRRARWGNG
Trigger: ACCATTACCCCACCGTGCCCTCCTGAGGAGCCCCCACCCTCCCGAGACACGCTGAACACAACTCTTCATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555052.1
ENST00000556399.5
CDS CCA 72 bp TGTCTTGGTGAGGGCAGATTGCCAAGGGCTTCTTGGTaGCTGGCATCTTCCTTGTCCCCAGGGCTCAGTGGG +
Preference number: 6 (lower is better)
Translates to: CLGEGRLPRASW*LASSLSPGLSG
Trigger: CCCACTGAGCCCTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS CCA 72 bp CCTCCTGAAGACACAAAATGGCCAGGCTGTCCTGGCTaGGAGCAGTCCATGCCTACCTCCTTTCCACCCTGC +
Preference number: 6 (lower is better)
Translates to: PPEDTKWPGCPG*EQSMPTSFPPC
Trigger: GCAGGGTGGAAAGGAGGTAGGCATGGACTGCTCCCAGCCAGGACAGCCTGGCCATTTTGTGTCTTCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555052.1
CDS CAA 90 bp ACCAGGTGGCATTCTGGAAGCTTGTGCTCACTTGGTGAGGGCAGATaGCCAAGGGCTTCTTGGTGGCTGGCATCTTCCTTGTCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: TRWHSGSLCSLGEGR*PRASWWLASSLSPG
Trigger: CCCTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGTGAGCACAAGCTTCCAGAATGCCACCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS GCA 72 bp CTTGGCTGGTACCAGGAAGTCCAGCGTGTACCTCAGTaGGTCCTCCCGATAAGTCCTCTCCACCACCTGGAA +
Preference number: 6 (lower is better)
Translates to: LGWYQEVQRVPQ*VLPISPLHHLE
Trigger: TTCCAGGTGGTGGAGAGGACTTATCGGGAGGACGCACTGAGGTACACGCTGGACTTCCTGGTACCAGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS GCA 72 bp GGCCTTCTGGGCCTGTGTGTCTTGGTGAGGGCAGATTaGCAAGGGCTTCTTGGTGGCTGGCATCTTCCTTGT +
Preference number: 6 (lower is better)
Translates to: GLLGLCVLVRAD*QGLLGGWHLPC
Trigger: ACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGACACACAGGCCCAGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS CCA 72 bp TGGAGGTCCAGAGGGCAGTTCTGGGGGCAGTGTACTTaGCTGATGTCCAACCATGAGGCCCTCTTTGTGCAC +
Preference number: 6 (lower is better)
Translates to: WRSRGQFWGQCT*LMSNHEALFVH
Trigger: GTGCACAAAGAGGGCCTCATGGTTGGACATCAGCCAAGTACACTGCCCCCAGAACTGCCCTCTGGACCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 72 bp TGCTCACTTGGTGAGGGCAGATTGCCAAGGGCTTCTTaGTGGCTGGCATCTTCCTTGTCCCCAGGGCTCAGT +
Preference number: 6 (lower is better)
Translates to: CSLGEGRLPRAS*WLASSLSPGLS
Trigger: ACTGAGCCCTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS CCA 72 bp GTGTGTCTTGGTGAGGGCAGATTGCCAAGGGCTTCTTaGTGGCTGGCATCTTCCTTGTCCCCAGGGCTCAGT +
Preference number: 6 (lower is better)
Translates to: VCLGEGRLPRAS*WLASSLSPGLS
Trigger: ACTGAGCCCTGGGGACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS TCA 72 bp AACCAGGTGGCATTCTGGAAGCTTGTGCTCACTTGGTaGGGGCAGATTGCCAAGGGCTTCTTGGTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: NQVAFWKLVLTW*GQIAKGFLVAG
Trigger: GCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGTGAGCACAAGCTTCCAGAATGCCACCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS GCA 72 bp TGCCAGCCGAGCAAAGCCCTCATCCACCCATTCATGTaGCTACGAAGTCAAAGGGGTTGGGGATGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: CQPSKALIHPFM*LRSQRGWGWER
Trigger: TCTCTCCCATCCCCAACCCCTTTGACTTCGTAGGCACATGAATGGGTGGATGAGGGCTTTGCTCGGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS CCA 72 bp AAGAGGAATCCACTGTATTGGGCACAGGCTTCCTGCTaGACCTTGGCAAGCAGGTGCTTGGCTGGTACCAGG +
Preference number: 6 (lower is better)
Translates to: KRNPLYWAQASC*TLASRCLAGTR
Trigger: CCTGGTACCAGCCAAGCACCTGCTTGCCAAGGTCCAGCAGGAAGCCTGTGCCCAATACAGTGGATTCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 72 bp ACCACCTGTTCATGCAGGCAGAGCGGCCACCCCTCATaGAAGAAGAGGAATCCACTGTATTGGGCACAGGCT +
Preference number: 6 (lower is better)
Translates to: TTCSCRQSGHPS*KKRNPLYWAQA
Trigger: AGCCTGTGCCCAATACAGTGGATTCCTCTTCTTCCATGAGGGGTGGCCGCTCTGCCTGCATGAACAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS CCA 72 bp CCTAAACTGAAGTTGGCTCAAGGCAGGAATGAGTGCTaGAGGCAGTGGAGGTGCCTGACGAAGGTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: PKLKLAQGRNEC*RQWRCLTKVQQ
Trigger: CTGCTGGACCTTCGTCAGGCACCTCCACTGCCTCCAGCACTCATTCCTGCCTTGAGCCAACTTCAGTTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553709.5
CDS CAA 72 bp AATCCACTGTATTGGGCACAGGCTTCCTGCTGGACCTaGGCAAGCAGGTGCTTGGCTGGTACCAGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: NPLYWAQASCWT*ASRCLAGTRKS
Trigger: GGACTTCCTGGTACCAGCCAAGCACCTGCTTGCCAAGGTCCAGCAGGAAGCCTGTGCCCAATACAGTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS GCA 72 bp AGGGCCTCTTCTGGAATGTTGTCCCCTTTTCCTTCCTaGACAGTCTCCAGCGGAGGTGTTGGAGTGTCAGAC +
Preference number: 6 (lower is better)
Translates to: RASSGMLSPFPS*TVSSGGVGVSD
Trigger: GTCTGACACTCCAACACCTCCGCTGGAGACTGTGCAGGAAGGAAAAGGGGACAACATTCCAGAAGAGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
ENST00000556399.5
CDS GCA 72 bp CTGGTCCACCCCTCCCGTCAGGATGAGGAATCCAGATaGCATCAAGTCCCAAGCTACATCAGGGTGATCAGA +
Preference number: 6 (lower is better)
Translates to: LVHPSRQDEESR*HQVPSYIRVIR
Trigger: TCTGATCACCCTGATGTAGCTTGGGACTTGATGGCATCTGGATTCCTCATCCTGACGGGAGGGGTGGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298694.9
ENST00000553709.5
CDS CAA 72 bp AGTAGGCAGGTACTGAGGCGACCTGTTGGCCGGTCCTaGTTGATGCCTTGTAGCCACTCAGGTGTGAATAGG +
Preference number: 6 (lower is better)
Translates to: SRQVLRRPVGRS*LMPCSHSGVNR
Trigger: CCTATTCACACCTGAGTGGCTACAAGGCATCAACAAGGACCGGCCAACAGGTCGCCTCAGTACCTGCCTACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000556399.5
CDS TCA 72 bp TCCCTTCACCCACTGATGCCCACTGACCCGTCAGGATaGGGAATCCAGATGCCATCAAGTCCCAAGCTACAT +
Preference number: 6 (lower is better)
Translates to: SLHPLMPTDPSG*GIQMPSSPKLH
Trigger: ATGTAGCTTGGGACTTGATGGCATCTGGATTCCTCATCCTGACGGGTCAGTGGGCATCAGTGGGTGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555038.5
ENST00000555052.1
CDS CCA 72 bp GGCTTCCCTGAGCCTTCATATTCCTCCTTAACCAGGTaGCATTCTGGAAGCTTGTGCTCACTTGGTGAGGGC +
Preference number: 6 (lower is better)
Translates to: GFPEPSYSSLTR*HSGSLCSLGEG
Trigger: GCCCTCACCAAGTGAGCACAAGCTTCCAGAATGCCACCTGGTTAAGGAGGAATATGAAGGCTCAGGGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS CCA 72 bp AGGGTGATCAGAGACGGAGACTGCAAGGGCCTCTTCTaGAATGTTGTCCCCTTTTCCTTCCTGCACAGTCTC +
Preference number: 6 (lower is better)
Translates to: RVIRDGDCKGLF*NVVPFSFLHSL
Trigger: GAGACTGTGCAGGAAGGAAAAGGGGACAACATTCCAGAAGAGGCCCTTGCAGTCTCCGTCTCTGATCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
ENST00000556399.5
CDS CAA 90 bp CCTGAGCCTTCATATTCCTCCTTAACCAGGTGGCATTCTGGAAGCTaGTGCTCACTTGGTGAGGGCAGATTGCCAAGGGCTTCTTGGTGG +
Preference number: 6 (lower is better)
Translates to: PEPSYSSLTRWHSGS*CSLGEGRLPRASWW
Trigger: CCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGTGAGCACAAGCTTCCAGAATGCCACCTGGTTAAGGAGGAATATGAAGGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS TCA 72 bp CTTCAGAGAGCTGAGGCTCTTTCTCGCCTGCTGTTTTaGGCTCTTTTGGCTCAGATTCTGGCTTCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: LQRAEALSRLLF*ALLAQILASLS
Trigger: GCTCAGGGAAGCCAGAATCTGAGCCAAAAGAGCTCAAAACAGCAGGCGAGAAAGAGCCTCAGCTCTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS TCA 72 bp AATCCAGATGCCATCAAGTCCCAAGCTACATCAGGGTaGTCAGAGACGGAGACTGCAAGGGCCTCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: NPDAIKSQATSG*SETETARASSG
Trigger: TCCAGAAGAGGCCCTTGCAGTCTCCGTCTCTGATCACCCTGATGTAGCTTGGGACTTGATGGCATCTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
ENST00000556399.5
CDS GCA 72 bp ATTCTGGAAGCTTGTGCTCACTTGGTGAGGGCAGATTaGCAAGGGCTTCTTGGTGGCTGGCATCTTCCTTGT +
Preference number: 6 (lower is better)
Translates to: ILEACAHLVRAD*QGLLGGWHLPC
Trigger: ACAAGGAAGATGCCAGCCACCAAGAAGCCCTTGGCAATCTGCCCTCACCAAGTGAGCACAAGCTTCCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS GCA 72 bp CCCACAGGCTTCAGAGAGCTGAGGCTCTTTCTCGCCTaGTGTTTTGAGCTCTTTTGGCTCAGATTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: PTGFRELRLFLA*CFELFWLRFWL
Trigger: AAGCCAGAATCTGAGCCAAAAGAGCTCAAAACAGCAGGCGAGAAAGAGCCTCAGCTCTCTGAAGCCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298694.9
ENST00000553709.5
ENST00000555038.5
ENST00000555052.1
CDS TCA 72 bp GCCAGTCCCACTGATTTGGGGACGAGATGCCTTTCCTaGCTTTCCACCATACCTCCCCTTTGTATCCTCATT +
Preference number: 6 (lower is better)
Translates to: ASPTDLGTRCLS*LSTIPPLCILI
Trigger: AATGAGGATACAAAGGGGAGGTATGGTGGAAAGTCAGGAAAGGCATCTCGTCCCCAAATCAGTGGGACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554514.1
CDS GCA 72 bp ACAAAATGGCCAGGCCGTCAGGATGAGGAATCCAGATaGCATCAAGTCCCAAGCTACATCAGGGTGATCAGA +
Preference number: 6 (lower is better)
Translates to: TKWPGRQDEESR*HQVPSYIRVIR
Trigger: TCTGATCACCCTGATGTAGCTTGGGACTTGATGGCATCTGGATTCCTCATCCTGACGGCCTGGCCATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556399.5
CDS GCA 72 bp GGTAGATCTATGGAGGCACAGTCAGGTTTAGTATCTTaGCCCATGCCATTCAGCAAGGAGGTGGCAGAGCTA +
Preference number: 6 (lower is better)
Translates to: GRSMEAQSGLVS*PMPFSKEVAEL
Trigger: TAGCTCTGCCACCTCCTTGCTGAATGGCATGGGGCAAGATACTAAACCTGACTGTGCCTCCATAGATCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS CCA 72 bp CAAAGTGTGCTGAGAGGAGAAGCTGCACGCAAGTTCTaGATCTTCTCTAGAAGCCAGGAGAGAAGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: QSVLRGEAARKF*IFSRSQERRGR
Trigger: TCTCCCTCTTCTCTCCTGGCTTCTAGAGAAGATCCAGAACTTGCGTGCAGCTTCTCCTCTCAGCACACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554514.1
CDS CAA 72 bp GAGATGCCTTTCCTGACTTTCCACCATACCTCCCCTTaGTATCCTCATTGTCAAGGTCTTCACTCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: EMPFLTFHHTSP*YPHCQGLHSWG
Trigger: CCCCCAGGAGTGAAGACCTTGACAATGAGGATACAAAGGGGAGGTATGGTGGAAAGTCAGGAAAGGCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554514.1
CDS GCA 72 bp CGTCACTCTCCTGTTTTCTCACTGTTCCACCATCACTaGCTAACCATGTCACTCGGAGTTGGTATGGAGATG +
Preference number: 6 (lower is better)
Translates to: RHSPVFSLFHHH*LTMSLGVGMEM
Trigger: CATCTCCATACCAACTCCGAGTGACATGGTTAGGCAGTGATGGTGGAACAGTGAGAAAACAGGAGAGTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS GCA 72 bp TCCTCCTCAGATATCTGGCTCTTCTCTCCAATATGTTaGATCCTGGCTGTTTGGCATCCCAGCTGCCTAATT +
Preference number: 6 (lower is better)
Translates to: SSSDIWLFSPIC*ILAVWHPSCLI
Trigger: AATTAGGCAGCTGGGATGCCAAACAGCCAGGATGCAACATATTGGAGAGAAGAGCCAGATATCTGAGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS CAA 72 bp CTGGCTCTTCTCTCCAATATGTTGCATCCTGGCTGTTaGGCATCCCAGCTGCCTAATTTCTACTCTGCATCT +
Preference number: 6 (lower is better)
Translates to: LALLSNMLHPGC*ASQLPNFYSAS
Trigger: AGATGCAGAGTAGAAATTAGGCAGCTGGGATGCCAAACAGCCAGGATGCAACATATTGGAGAGAAGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS CAA 72 bp TTCCTCCTCAGATATCTGGCTCTTCTCTCCAATATGTaGCATCCTGGCTGTTTGGCATCCCAGCTGCCTAAT +
Preference number: 6 (lower is better)
Translates to: FLLRYLALLSNM*HPGCLASQLPN
Trigger: ATTAGGCAGCTGGGATGCCAAACAGCCAGGATGCAACATATTGGAGAGAAGAGCCAGATATCTGAGGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS CAA 90 bp TGGTGTGACTTCCTCCTCAGATATCTGGCTCTTCTCTCCAATATGTaGCATCCTGGCTGTTTGGCATCCCAGCTGCCTAATTTCTACTCT +
Preference number: 6 (lower is better)
Translates to: WCDFLLRYLALLSNM*HPGCLASQLPNFYS
Trigger: AGAGTAGAAATTAGGCAGCTGGGATGCCAAACAGCCAGGATGCAACATATTGGAGAGAAGAGCCAGATATCTGAGGAGGAAGTCACACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS CAA 90 bp CTCAGATATCTGGCTCTTCTCTCCAATATGTTGCATCCTGGCTGTTaGGCATCCCAGCTGCCTAATTTCTACTCTGCATCTTGGGCATTA +
Preference number: 6 (lower is better)
Translates to: LRYLALLSNMLHPGC*ASQLPNFYSASWAL
Trigger: TAATGCCCAAGATGCAGAGTAGAAATTAGGCAGCTGGGATGCCAAACAGCCAGGATGCAACATATTGGAGAGAAGAGCCAGATATCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555232.5
CDS TCA 72 bp CTGTTGACTATCACAACATGGATGGCAATGATGGTGTaGCTTCCTCCTCAGATATCTGGCTCTTCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: LLTITTWMAMMV*LPPQISGSSLQ
Trigger: TTGGAGAGAAGAGCCAGATATCTGAGGAGGAAGTCACACCATCATTGCCATCCATGTTGTGATAGTCAACAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555232.5