RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF39 (Homo sapiens)

Ensembl gene IDs: ENSG00000137135

Ensembl transcript IDs: ENST00000378387.4, ENST00000468876.1, ENST00000475323.5, ENST00000488918.2, ENST00000490638.5, ENST00000490970.5

Found 469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTaGACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCT +
Preference number: 1 (lower is better)
Translates to: LARGHPALATAGAGI*TQLAVSMLQEWGQP
Trigger: AGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR CCA 90 bp ACTGTGGGATGTGACAAGCCACTTCCCAAATCAGTGCTGGGAACATaGCACTGTGCTTCACCTGCCAATCAGAATGCCCCTGGAGAATTG +
Preference number: 1 (lower is better)
Translates to: TVGCDKPLPKSVLGT*HCASPANQNAPGEL
Trigger: CAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGCACAGTGCCATGTTCCCAGCACTGATTTGGGAAGTGGCTTGTCACATCCCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR GCA 90 bp ATCAGTGCTGGGAACATGGCACTGTGCTTCACCTGCCAATCAGAATaGCCCTGGAGAATTGTATTCTCCTCAGGGCATTGCTTTAAGAGC +
Preference number: 1 (lower is better)
Translates to: ISAGNMALCFTCQSE*PWRIVFSSGHCFKS
Trigger: GCTCTTAAAGCAATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGCACAGTGCCATGTTCCCAGCACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR TCA 90 bp GTTGTACACACCCATACTAGGTGCCTAAGGACAACTGGGCCTTCTTaGAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTG +
Preference number: 1 (lower is better)
Translates to: VVHTHTRCLRTTGPS*RAVLIRTKRGCLPV
Trigger: CACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTGTACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR GCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGCTGAGGCCACCAGCATaGCCGCGTTCAGGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: WRLQNQVKAREASLLEVELRPPA*PRSGPK
Trigger: TTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAG...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR GCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGGGACTACGGAGAAGGTaGAGCCAGGCTGTGGCAAAG +
Preference number: 2 (lower is better)
Translates to: WRLQNQVKAREASLLEVEGLRRR*SQAVAK
Trigger: CTTTGCCACAGCCTGGCTGCACCTTCTCCGTAGTCC...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR CCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGGGGAGGCGAGTCTGCTaGAGGTGGAGACAAAGTCTC +
Preference number: 2 (lower is better)
Translates to: WRLQNQVKAREASLLEVEGRRVC*RWRQSL
Trigger: GAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCC...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR CAA 90 bp ACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTaGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: TCSRSPSAGNCWSWD*NPASSVHATRVGPA
Trigger: GGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTCGAGGAGGAGATTGGTaGCAGTCAGGCCTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: DMEASEPGEGSGGESAGGRGGDW*QSGLGG
Trigger: TCCTCCCAGGCCTGACTGTCACCAATCTCCTCCTCG...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR TCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGGCTTCAGAACCAGGTaGAGGCTCGGGAGGCGAGTC +
Preference number: 2 (lower is better)
Translates to: VKAREASLLEVETKSLKLGFRTR*RLGRRV
Trigger: GACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCC...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR GCA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTCTGAGGCCACCAGCATaGCCGCGTTCAGGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFLRPPA*PRSGPK
Trigger: TTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAG...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475323.5
3UTR-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGGCTGTGACCTATCCCTaGGGTATCCTGAGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: WRLQNQVKAREASLLEVEAVTYP*GILSSG
Trigger: TCCAGAACTCAGGATACCTCAGGGATAGGTCACAGC...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTACTCCTGGGCTGGAATaGTCCTGCCACCTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: DMEASEPGEGSGGESAGGTPGLE*SCHLCF
Trigger: GAAGCAGAGGTGGCAGGATCATTCCAGCCCAGGAGT...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGCTTGAACTCCTGGGCTaGAATGATCCTGCCACCTCT +
Preference number: 2 (lower is better)
Translates to: WRLQNQVKAREASLLEVELELLG*NDPATS
Trigger: AGAGGTGGCAGGATCATTCCAGCCCAGGAGTTCAAG...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACAACCTAGCTACTTCCTaGGAGGTGGGGCGGGGACTA +
Preference number: 2 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDNLATS*EVGRGL
Trigger: TAGTCCCCGCCCCACCTCCCAGGAAGTAGCTAGGTT...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR CCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTAACCTAGCTACTTCCTaGGAGGTGGGGCGGGGACTA +
Preference number: 2 (lower is better)
Translates to: DMEASEPGEGSGGESAGGNLATS*EVGRGL
Trigger: TAGTCCCCGCCCCACCTCCCAGGAAGTAGCTAGGTT...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR CCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGGAGGCGAGTCTGCTaGAGGTGGAGACAAAGTCTC +
Preference number: 2 (lower is better)
Translates to: DMEASEPGEGSGGESAGGGRRVC*RWRQSL
Trigger: GAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCC...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACTCCATGCTACAAGAGTaGGGCCAGCCTTGGCACAGG +
Preference number: 2 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDSMLQE*GQPWHR
Trigger: CCTGTGCCAAGGCTGGCCCCACTCTTGTAGCATGGA...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR GCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACCCATCCACGAGCTGCTaGAAGATAGCAAGCCGGACA +
Preference number: 2 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDPSTSC*KIASRT
Trigger: TGTCCGGCTTGCTATCTTGCAGCAGCTCGTGGATGG...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACAGCGCTGGCAACTGCTaGAGCTGGGATTTGAACCCA +
Preference number: 2 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDSAGNC*SWDLNP
Trigger: TGGGTTCAAATCCCAGCTCCAGCAGTTGCCAGCGCT...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGCTGTGACCTATCCCTaGGGTATCCTGAGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDAVTYP*GILSSG
Trigger: TCCAGAACTCAGGATACCTCAGGGATAGGTCACAGC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGACTCCTGGGCTGGAATaGTCCTGCCACCTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGTPGLE*SCHLCF
Trigger: GAAGCAGAGGTGGCAGGATCATTCCAGCCCAGGAGT...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTTGCAGCCTTGATAAATaGCGGGCCATGGACACAGCA +
Preference number: 2 (lower is better)
Translates to: DMEASEPGEGSGGESAGGCSLDK*RAMDTA
Trigger: TGCTGTGTCCATGGCCCGTCATTTATCAAGGCTGCA...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAACTGGGCCTTCTTaGAGAGCTGTCCTTATTAGG +
Preference number: 2 (lower is better)
Translates to: WRLQNQVKAREASLLEVETTGPS*RAVLIR
Trigger: CCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR TCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGACATTTCTTCAGTGTaGCTACTCTGGCTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDDISSV*LLWLEP
Trigger: GGGCTCCAGCCAGAGTAGTCACACTGAAGAAATGTC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCTGGACCCCCTTTTTaGGCGGTGAGGAGAGCAATG +
Preference number: 2 (lower is better)
Translates to: WSWDLNPASSVHATRVGPAGPPF*AVRRAM
Trigger: CATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGC...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGAACAGCTGGCCCAGTTaGCACAACAGCTGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: WDLNPASSVHATRVGPALNSWPS*HNSWPR
Trigger: TCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTT...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGCAGCAGACCTCTTCCTaGGGACTTTGTGTTGCCCAG +
Preference number: 2 (lower is better)
Translates to: VKAREASLLEVETKSLKLQQTSS*GLCVAQ
Trigger: CTGGGCAACACAAAGTCCTCAGGAAGAGGTCTGCTG...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
3UTR-3UTR GCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTCACACCCATACTAGGTaGCTAAGGACAACTGGGCCT +
Preference number: 2 (lower is better)
Translates to: DMEASEPGEGSGGESAGGHTHTR*LRTTGP
Trigger: AGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTG...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR GCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACCACACCCATACTAGGTaGCTAAGGACAACTGGGCCT +
Preference number: 2 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDHTHTR*LRTTGP
Trigger: AGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTG...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR GCA 90 bp TGCTGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCTCGGGAGGCGAGTCTaGTGGAGGTGGAGACAAAGT +
Preference number: 2 (lower is better)
Translates to: CWSWDLNPASSVHATRVGLGRRV*WRWRQS
Trigger: ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAG...CCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR GCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGCTCGGGAGGCGAGTCTaGTGGAGGTGGAGACAAAGT +
Preference number: 2 (lower is better)
Translates to: WDLNPASSVHATRVGPALLGRRV*WRWRQS
Trigger: ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAG...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR GCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGGGACCATCCACGAGCTaGTGCAAGATAGCAAGCCGG +
Preference number: 2 (lower is better)
Translates to: WDLNPASSVHATRVGPALGPSTS*CKIASR
Trigger: CCGGCTTGCTATCTTGCAGCAGCTCGTGGATGGTCC...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTTTGTACTCTTGGCTGTaGCCTATCCCTGAGGTATCC +
Preference number: 2 (lower is better)
Translates to: DMEASEPGEGSGGESAGGLYSWL*PIPEVS
Trigger: GGATACCTCAGGGATAGGTCACAGCCAAGAGTACAA...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGAGGGGCTGGTTCATTTaGGGTTTAGTTGGGTTGGAC +
Preference number: 2 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQRGWFI*GLVGLD
Trigger: GTCCAACCCAACTAAACCTCAAATGAACCAGCCCCT...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR TCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACAGGGGCTGGTTCATTTaGGGTTTAGTTGGGTTGGAC +
Preference number: 2 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDRGWFI*GLVGLD
Trigger: GTCCAACCCAACTAAACCTCAAATGAACCAGCCCCT...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR TCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACAGGAGGGACGACAGCTaGAGGTCGACTAAAACAAAG +
Preference number: 2 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDRRDDS*RSTKTK
Trigger: CTTTGTTTTAGTCGACCTTCAGCTGTCGTCCCTCCT...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR TCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTAAACTGGAACATTCCTaGTCTCTCCCCACACAGAGG +
Preference number: 2 (lower is better)
Translates to: DMEASEPGEGSGGESAGGKLEHS*SLPTQR
Trigger: CCTCTGTGTGGGGAGAGATCAGGAATGTTCCAGTTT...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp GCTTCACCTGCCAATCAGAATGCCCCTGGAGAATTGTATTCTCCTCAGGGCATTGGCTTCAGAACCAGGTaGAGGCTCGGGAGGCGAGTC +
Preference number: 2 (lower is better)
Translates to: ASPANQNAPGELYSPQGIGFRTR*RLGRRV
Trigger: GACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCC...AATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR-3UTR CCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGCTTGAACTCCTGGGCTaGAATGATCCTGCCACCTCT +
Preference number: 2 (lower is better)
Translates to: VKAREASLLEVETKSLKLLELLG*NDPATS
Trigger: AGAGGTGGCAGGATCATTCCAGCCCAGGAGTTCAAG...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGTGCCTAAGGACAACTaGGCCTTCTTGAAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: IWRLQNQVKAREASLLEVVPKDN*AFLKSC
Trigger: ACAGCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCAC...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR CCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGAGCGCTGGCAACTGCTaGAGCTGGGATTTGAACCCA +
Preference number: 2 (lower is better)
Translates to: WDLNPASSVHATRVGPALSAGNC*SWDLNP
Trigger: TGGGTTCAAATCCCAGCTCCAGCAGTTGCCAGCGCT...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGACATTTCTTCAGTGTaGCTACTCTGGCTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: WSWDLNPASSVHATRVGPDISSV*LLWLEP
Trigger: GGGCTCCAGCCAGAGTAGTCACACTGAAGAAATGTC...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp TGCTGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCTTGGCACAGGAGGTTaGTTGCTGCAGCCAGTGTTT +
Preference number: 2 (lower is better)
Translates to: CWSWDLNPASSVHATRVGLGTGG*LLQPVF
Trigger: AAACACTGGCTGCAGCAATCAACCTCCTGTGCCAAG...CCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGTTGGTCAGATGATCTaGAGTAGCTTGGTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: VKAREASLLEVETKSLKLVGQMI*SSLVQA
Trigger: TGCCTGGACCAAGCTACTCCAGATCATCTGACCAAC...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGTTGGTCAGATGATCTaGAGTAGCTTGGTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: GEGSGGESAGGGDKVSETVGQMI*SSLVQA
Trigger: TGCCTGGACCAAGCTACTCCAGATCATCTGACCAAC...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTACTCCTGGGCTGGAATaGTCCTGCCACCTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFTPGLE*SCHLCF
Trigger: GAAGCAGAGGTGGCAGGATCATTCCAGCCCAGGAGT...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCAAAGTCTGTTTTCATaGTGGAGTGCTCCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: IWRLQNQVKAREASLLEVQSLFS*WSAPVC
Trigger: ACACACAGGAGCACTCCATCATGAAAACAGACTTTG...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR GCA 90 bp GCTTCACCTGCCAATCAGAATGCCCCTGGAGAATTGTATTCTCCTCAGGGCATTGGACCATCCACGAGCTaGTGCAAGATAGCAAGCCGG +
Preference number: 2 (lower is better)
Translates to: ASPANQNAPGELYSPQGIGPSTS*CKIASR
Trigger: CCGGCTTGCTATCTTGCAGCAGCTCGTGGATGGTCC...AATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR-3UTR CCA 90 bp TGCTGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGGTTGGTCAGATGATCTaGAGTAGCTTGGTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: CWSWDLNPASSVHATRVGVGQMI*SSLVQA
Trigger: TGCCTGGACCAAGCTACTCCAGATCATCTGACCAAC...CCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACATAAATGACGGGCCATaGACACAGCACAGAGCTTAT +
Preference number: 2 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDINDGP*TQHRAY
Trigger: ATAAGCTCTGTGCTGTGTCCATGGCCCGTCATTTAT...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR TCA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGATCCCTGAGGTATCCTaGGTTCTGGAATCTATAAGA +
Preference number: 2 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQIPEVS*VLESIR
Trigger: TCTTATAGATTCCAGAACTCAGGATACCTCAGGGAT...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTATCCCTGAGGTATCCTaGGTTCTGGAATCTATAAGA +
Preference number: 2 (lower is better)
Translates to: DMEASEPGEGSGGESAGGIPEVS*VLESIR
Trigger: TCTTATAGATTCCAGAACTCAGGATACCTCAGGGAT...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACCTTTGTCAAATCATaGAGGGTTCTGTTTTGTTCA +
Preference number: 2 (lower is better)
Translates to: WRLQNQVKAREASLLEVETFVKS*RVLFCS
Trigger: TGAACAAAACAGAACCCTTCATGATTTGACAAAGGT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CCA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTATAAATGACGGGCCATaGACACAGCACAGAGCTTAT +
Preference number: 2 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFINDGP*TQHRAY
Trigger: ATAAGCTCTGTGCTGTGTCCATGGCCCGTCATTTAT...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475323.5
3UTR-3UTR TCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTATCCCTGAGGTATCCTaGGTTCTGGAATCTATAAGA +
Preference number: 2 (lower is better)
Translates to: GEGSGGESAGGGDKVSETIPEVS*VLESIR
Trigger: TCTTATAGATTCCAGAACTCAGGATACCTCAGGGAT...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCAGGCAAACAGAAAGTaGCCTTTGTCAAATCATGAA +
Preference number: 2 (lower is better)
Translates to: IWRLQNQVKAREASLLEVQANRK*PLSNHE
Trigger: TTCATGATTTGACAAAGGTCACTTTCTGTTTGCCTG...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTCAGGCAAACAGAAAGTaGCCTTTGTCAAATCATGAA +
Preference number: 2 (lower is better)
Translates to: DMEASEPGEGSGGESAGGQANRK*PLSNHE
Trigger: TTCATGATTTGACAAAGGTCACTTTCTGTTTGCCTG...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp GCTTCACCTGCCAATCAGAATGCCCCTGGAGAATTGTATTCTCCTCAGGGCATTAAACTGGAACATTCCTaGTCTCTCCCCACACAGAGG +
Preference number: 2 (lower is better)
Translates to: ASPANQNAPGELYSPQGIKLEHS*SLPTQR
Trigger: CCTCTGTGTGGGGAGAGATCAGGAATGTTCCAGTTT...AATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR-3UTR GCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGGGACCATCCACGAGCTaGTGCAAGATAGCAAGCCGG +
Preference number: 2 (lower is better)
Translates to: YYEVILRIQGGNGCEERVGPSTS*CKIASR
Trigger: CCGGCTTGCTATCTTGCAGCAGCTCGTGGATGGTCC...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGCATTTGAGGTTTAGTTaGGTTGGACTTGGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGHLRFS*VGLGFL
Trigger: CAGGAAACCAAGTCCAACCCAACTAAACCTCAAATG...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR CCA 90 bp GCTTCACCTGCCAATCAGAATGCCCCTGGAGAATTGTATTCTCCTCAGGGCATTAATGGGGACATAGGTTaGGAGCCACTGAGTGGACAT +
Preference number: 2 (lower is better)
Translates to: ASPANQNAPGELYSPQGINGDIG*EPLSGH
Trigger: ATGTCCACTCAGTGGCTCCCAACCTATGTCCCCATT...AATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR CAA 90 bp ACATGGCACTGTGCTTCACCTGCCAATCAGAATGCCCCTGGAGAATaGTATTCTCCTCAGGGCATTGCTTTAAGAGCACTACGTGTTCAG +
Preference number: 2 (lower is better)
Translates to: TWHCASPANQNAPGE*YSPQGIALRALRVQ
Trigger: CTGAACACGTAGTGCTCTTAAAGCAATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGCACAGTGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR-3UTR TCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGACCTTTGTCAAATCATaGAGGGTTCTGTTTTGTTCA +
Preference number: 2 (lower is better)
Translates to: VKAREASLLEVETKSLKLTFVKS*RVLFCS
Trigger: TGAACAAAACAGAACCCTTCATGATTTGACAAAGGT...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGCCCAAGTCAGACTGTaGTACCAGCGTGACAGCTCC +
Preference number: 2 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEAQVRL*YQRDSS
Trigger: GGAGCTGTCACGCTGGTACCACAGTCTGACTTGGGC...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475323.5
3UTR-3UTR CCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGTTTTTCGATCCTAGTTaGTTGTACACACCCATACTA +
Preference number: 2 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGFFDPS*LYTPIL
Trigger: TAGTATGGGTGTGTACAACCAACTAGGATCGAAAAA...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR TCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGTTGTACTCTTGGCTGTaGCCTATCCCTGAGGTATCC +
Preference number: 2 (lower is better)
Translates to: YYEVILRIQGGNGCEERVLYSWL*PIPEVS
Trigger: GGATACCTCAGGGATAGGTCACAGCCAAGAGTACAA...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGAGGAGGGACGACAGCTaGAGGTCGACTAAAACAAAG +
Preference number: 2 (lower is better)
Translates to: YYEVILRIQGGNGCEERVRRDDS*RSTKTK
Trigger: CTTTGTTTTAGTCGACCTTCAGCTGTCGTCCCTCCT...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475323.5
3UTR-3UTR CCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGAATGGGGACATAGGTTaGGAGCCACTGAGTGGACAT +
Preference number: 2 (lower is better)
Translates to: YYEVILRIQGGNGCEERVNGDIG*EPLSGH
Trigger: ATGTCCACTCAGTGGCTCCCAACCTATGTCCCCATT...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR TCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTCAGGCAAACAGAAAGTaGCCTTTGTCAAATCATGAA +
Preference number: 2 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFQANRK*PLSNHE
Trigger: TTCATGATTTGACAAAGGTCACTTTCTGTTTGCCTG...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGTGCCTAAGGACAACTaGGCCTTCTTGAAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEVPKDN*AFLKSC
Trigger: ACAGCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCAC...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475323.5
3UTR-3UTR GCA 90 bp TTGGAAGGCTCCAGTAAGCACTATGGAAAGAAGATACATAAAGGACAAATTTTGCCATCCACGAGCTGCTaGAAGATAGCAAGCCGGACA +
Preference number: 2 (lower is better)
Translates to: LEGSSKHYGKKIHKGQILPSTSC*KIASRT
Trigger: TGTCCGGCTTGCTATCTTGCAGCAGCTCGTGGATGG...CAAAATTTGTCCTTTATGTATCTTCTTTCCATAGTGCTTACTGGAGCCTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR-3UTR CCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAACATTTGAGGTTTAGTTaGGTTGGACTTGGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEHLRFS*VGLGFL
Trigger: CAGGAAACCAAGTCCAACCCAACTAAACCTCAAATG...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475323.5
3UTR-3UTR TCA 90 bp TTGGAAGGCTCCAGTAAGCACTATGGAAAGAAGATACATAAAGGACAAATTTTGAGAGCAATGATTCTGTaGATTTTTGGGGAATTTGTG +
Preference number: 2 (lower is better)
Translates to: LEGSSKHYGKKIHKGQILRAMIL*IFGEFV
Trigger: CACAAATTCCCCAAAAATTCACAGAATCATTGCTCT...CAAAATTTGTCCTTTATGTATCTTCTTTCCATAGTGCTTACTGGAGCCTTCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR TCA 72 bp GGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTaGACCCAGCTAGCAGTGTCCATGCTACAAGAGTGG +
Preference number: 3 (lower is better)
Translates to: GHPALATAGAGI*TQLAVSMLQEW
Trigger: CCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CAA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGTACAAAGCTGCAGCCTaGATAAATGACGGGCCATGG +
Preference number: 3 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQYKAAA*INDGPW
Trigger: CCATGGCCCGTCATTTATCAAGGCTGCAGCTTTGTA...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR-3UTR CAA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGAATGGGGACATAGGTaGGGAGCCACTGAGTGGACA +
Preference number: 3 (lower is better)
Translates to: WSWDLNPASSVHATRVGPEWGHR*GATEWT
Trigger: TGTCCACTCAGTGGCTCCCAACCTATGTCCCCATTC...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CAA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCACTCTTCCTGAGGACTTaGTGTTGCCCAGGCTGGTCT +
Preference number: 3 (lower is better)
Translates to: WSWDLNPASSVHATRVGPLFLRT*CCPGWS
Trigger: AGACCAGCCTGGGCAACACAAAGTCCTCAGGAAGAG...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
3UTR-3UTR CAA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTTACAAAGCTGCAGCCTaGATAAATGACGGGCCATGG +
Preference number: 3 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFYKAAA*INDGPW
Trigger: CCATGGCCCGTCATTTATCAAGGCTGCAGCTTTGTA...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475323.5
3UTR TCA 72 bp GGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTaGAACTGGAACATTCCTGATCTCTCCCCACACAGA +
Preference number: 3 (lower is better)
Translates to: GRRVCWRWRQSL*NWNIPDLSPHR
Trigger: TCTGTGTGGGGAGAGATCAGGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CAA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGATGATCTGGAGTAGCTaGGTCCAGGCAAACAGAAAG +
Preference number: 3 (lower is better)
Translates to: VKAREASLLEVETKSLKLMIWSS*VQANRK
Trigger: CTTTCTGTTTGCCTGGACCAAGCTACTCCAGATCAT...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CAA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGTTCGATCCTAGTTGGTaGTACACACCCATACTAGGT +
Preference number: 3 (lower is better)
Translates to: IWRLQNQVKAREASLLEVFDPSW*YTPILG
Trigger: ACCTAGTATGGGTGTGTACAACCAACTAGGATCGAA...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR GCA 72 bp GGGAACATGGCACTGTGCTTCACCTGCCAATCAGAATaGCCCTGGAGAATTGTATTCTCCTCAGGGCATTGC +
Preference number: 3 (lower is better)
Translates to: GNMALCFTCQSE*PWRIVFSSGHC
Trigger: GCAATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGCACAGTGCCATGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR GCA 72 bp TCACTGTGGGATGTGACAAGCCACTTCCCAAATCAGTaGTGGGAACATGGCACTGTGCTTCACCTGCCAATC +
Preference number: 3 (lower is better)
Translates to: SLWDVTSHFPNQ*WEHGTVLHLPI
Trigger: GATTGGCAGGTGAAGCACAGTGCCATGTTCCCAGCACTGATTTGGGAAGTGGCTTGTCACATCCCACAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR CCA 72 bp TGTGACAAGCCACTTCCCAAATCAGTGCTGGGAACATaGCACTGTGCTTCACCTGCCAATCAGAATGCCCCT +
Preference number: 3 (lower is better)
Translates to: CDKPLPKSVLGT*HCASPANQNAP
Trigger: AGGGGCATTCTGATTGGCAGGTGAAGCACAGTGCCATGTTCCCAGCACTGATTTGGGAAGTGGCTTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR CCA 72 bp TCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTaGGACATAGGACGTCGCTTCATATGCTGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: SFLEVFQQTDHV*DIGRRFICWVR
Trigger: CCTCACCCAGCATATGAAGCGACGTCCTATGTCCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR-3UTR CAA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGTGAGGAGTAGTCACTaGCTCGAGGTCACCCAGCGC +
Preference number: 3 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEVRSSH*LEVTQR
Trigger: GCGCTGGGTGACCTCGAGCAAGTGACTACTCCTCAC...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR TCA 72 bp AGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTaGCCATGTGTGGGACATAGGACGTCGCTTCATATG +
Preference number: 3 (lower is better)
Translates to: RELLIPGGVSAN*PCVGHRTSLHM
Trigger: CATATGAAGCGACGTCCTATGTCCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
3UTR GCA 72 bp CAAATCAGTGCTGGGAACATGGCACTGTGCTTCACCTaGCAATCAGAATGCCCCTGGAGAATTGTATTCTCC +
Preference number: 3 (lower is better)
Translates to: QISAGNMALCFT*QSECPWRIVFS
Trigger: GGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGCACAGTGCCATGTTCCCAGCACTGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR TCA 72 bp ACCCATACTAGGTGCCTAAGGACAACTGGGCCTTCTTaGAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: THTRCLRTTGPS*RAVLIRTKRGC
Trigger: GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCACCTAGTATGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
3UTR CCA 72 bp ATGGCACTGTGCTTCACCTGCCAATCAGAATGCCCCTaGAGAATTGTATTCTCCTCAGGGCATTGCTTTAAG +
Preference number: 3 (lower is better)
Translates to: MALCFTCQSECP*RIVFSSGHCFK
Trigger: CTTAAAGCAATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGCACAGTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR-3UTR CAA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAACCTGAGGACTTTGTGTaGCCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEPEDFV*PRLVLN
Trigger: GTTCAAGACCAGCCTGGGCAACACAAAGTCCTCAGG...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
3UTR-3UTR CAA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAACCTTGGCACAGGAGGTaGATTGCTGCAGCCAGTGTT +
Preference number: 3 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEPWHRR*IAAASV
Trigger: AACACTGGCTGCAGCAATCAACCTCCTGTGCCAAGG...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR GCA 72 bp GAATGCCCCTGGAGAATTGTATTCTCCTCAGGGCATTaGTTTAAGAGCACTACGTGTTCAGGAAACAACCAG +
Preference number: 3 (lower is better)
Translates to: ECPWRIVFSSGH*FKSTTCSGNNQ
Trigger: CTGGTTGTTTCCTGAACACGTAGTGCTCTTAAAGCAATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR CCA 72 bp TTCCTGAGGGGCTGTCACCTTGAGGAGACATTATTTTaGAAGGCTCCAGTAAGCACTATGGAAAGAAGATAC +
Preference number: 3 (lower is better)
Translates to: FLRGCHLEETLF*KAPVSTMERRY
Trigger: GTATCTTCTTTCCATAGTGCTTACTGGAGCCTTCCAAAATAATGTCTCCTCAAGGTGACAGCCCCTCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378387.4
3UTR-3UTR CAA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAATGATCTGGAGTAGCTaGGTCCAGGCAAACAGAAAG +
Preference number: 3 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEMIWSS*VQANRK
Trigger: CTTTCTGTTTGCCTGGACCAAGCTACTCCAGATCAT...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR TCA 72 bp CATATGCTGGGTGAGGAGCTAGATAGACTAGGATTGTaGTTCTCTGAGGTAAAAACCCAATCACTGTCTCCA +
Preference number: 3 (lower is better)
Translates to: HMLGEELDRLGL*FSEVKTQSLSP
Trigger: TGGAGACAGTGATTGGGTTTTTACCTCAGAGAATCACAATCCTAGTCTATCTAGCTCCTCACCCAGCATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGCCCTACAGCCGTCCCTaGACACTGGTCCCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVEPYSRP*TLVPGV
Trigger: GACGCCCGGGACCAGTGTTCAGGGACGGCTGTAGGG...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCGGGCACGCTGCTCTTaGACCGGGCACCGCGAACCG +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVRARCS*TGHREP
Trigger: CGGTTCGCGGTGCCCGGTGCAAGAGCAGCGTGCCCG...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR GCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACTCCCAGCGGGCACGCTaGTCTTGCACCGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDSQRAR*SCTGHR
Trigger: GCGGTGCCCGGTGCAAGAGCAGCGTGCCCGCTGGGA...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR GCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGCAGCTCCCGGGCGGTaGAGGCGCGTTTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: VKAREASLLEVETKSLKLAAPGR*RRVSAP
Trigger: GGGAGCGGAAACGCGCCTGCACCGCCCGGGAGCTGC...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR CCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGGCCTGGCGCTCAGGTaGTCGCAGGGTCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDGLALR*SQGPLG
Trigger: GCCAAGGGGACCCTGCGACCACCTGAGCGCCAGGCC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGCGGGTGTCCCCAGCCTaGGCGGGCCGCTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALRVSPA*AGRFQS
Trigger: GGACTGGAAGCGGCCCGCGCAGGCTGGGGACACCCG...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGCTCCCCTCCAGGCTTaGTCCTCCCCCACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDAPLQA*SSPTQL
Trigger: GAGCTGGGTGGGGGAGGAGCAAGCCTGGAGGGGAGC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGCGGGCACGCTGCTCTTaGACCGGGCACCGCGAACCG +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALRARCS*TGHREP
Trigger: CGGTTCGCGGTGCCCGGTGCAAGAGCAGCGTGCCCG...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR GCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGTCCCAGCGGGCACGCTaGTCTTGCACCGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGSQRAR*SCTGHR
Trigger: GCGGTGCCCGGTGCAAGAGCAGCGTGCCCGCTGGGA...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR GCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGTGGGGTAGAGGGCCTTaGAGGCAAAGGTGCCACTCC +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVEWGRGP*RQRCHS
Trigger: GGAGTGGCACCTTTGCCTGCAAGGCCCTCTACCCCA...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGCCAAACAGGGCCTaGCGCTCAGGTGGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVEPNRA*RSGGRR
Trigger: CCTGCGACCACCTGAGCGCCAGGCCCTGTTTGGCTC...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACTAACAGCCAGCCCTaGCGTAGGAACCAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVETNSQP*RRNQRP
Trigger: AGGGCGCTGGTTCCTACGCCAGGGCTGGCTGTTAGT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGCCGAGGCTCCCCATaGGGAGGCACCACTAACAGC +
Preference number: 4 (lower is better)
Translates to: DMEASEPGEGSGGESAGGGRGSP*GGTTNS
Trigger: GCTGTTAGTGGTGCCTCCCCATGGGGAGCCTCGGCC...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCCGCAGCAGGTGCAGTaGAGGCCGAGGCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVPQQVQ*RPRLGH
Trigger: ATGGCCAAGCCTCGGCCTCCACTGCACCTGCTGCGG...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACCCGCAGCAGGTGCAGTaGAGGCCGAGGCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDPQQVQ*RPRLGH
Trigger: ATGGCCAAGCCTCGGCCTCCACTGCACCTGCTGCGG...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGGATGACACTGGGCCATaGGGTAGAGGGCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVEDDTGP*GRGPCR
Trigger: CCTGCAAGGCCCTCTACCCCATGGCCCAGTGTCATC...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR TCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGGCTGGCGCCGTAGATaGGCTCCCAGGAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDGWRRR*APRSQT
Trigger: TGTTTGGCTCCTGGGAGCTCATCTACGGCGCCAGCC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGTTGCCTGGCGTCCACTaGGCAGAGCCTGGACACGCC +
Preference number: 4 (lower is better)
Translates to: VKAREASLLEVETKSLKLLPGVH*AEPGHA
Trigger: GGCGTGTCCAGGCTCTGCTCAGTGGACGCCAGGCAA...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACTCCTGGGCTGGAATaGTCCTGCCACCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVETPGLE*SCHLCF
Trigger: GAAGCAGAGGTGGCAGGATCATTCCAGCCCAGGAGT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGTTGATCCCGGCCCCTaGTCCAGGCCTCACTGTGCA +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDVDPGP*SRPHCA
Trigger: TGCACAGTGAGGCCTGGAGCAGGGGCCGGGATCAAC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAGCCAAACAGGGCCTaGCGCTCAGGTGGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: VKAREASLLEVETKSLKLEPNRA*RSGGRR
Trigger: CCTGCGACCACCTGAGCGCCAGGCCCTGTTTGGCTC...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACCCACTGAGCAGAGCCTaGACACGCCGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDPLSRA*TRRRCW
Trigger: CCAGCACCTTCGGCGTGTCCAGGCTCTGCTCAGTGG...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGGCCCAAGTCAGACTGTaGTACCAGCGTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVEAQVRL*YQRDSS
Trigger: GGAGCTGTCACGCTGGTACCACAGTCTGACTTGGGC...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGTGAGCCACAGCGCCTaGCCTGAAGCAGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: DMEASEPGEGSGGESAGGVSHSA*PEAATH
Trigger: GTGAGTGGCTGCTTCAGGCCAGGCGCTGTGGCTCAC...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGCCACAGTCAGCCGCATaGCTCCCCTGTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALPQSAA*LPCAPA
Trigger: GGCTGGGGCACAGGGGAGCCATGCGGCTGACTGTGG...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGCCCGTGTGAGCTGTTaGTGGTCAGGGCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDARVSC*WSGLLG
Trigger: TCCCAACAGCCCTGACCATCAACAGCTCACACGGGC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR TCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGTCGGGCAGCCCGTGTaGGCTGTTGATGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGVGQPV*AVDGQG
Trigger: GCCCTGACCATCAACAGCTCACACGGGCTGCCCGAC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR TCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGCTTCAGAACCAGGTaGAGGCTCGGGAGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETGFRTR*RLGRRV
Trigger: GACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCC...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAGGTGTGAGCTGTTaGTGGTCAGGGCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVETGVSC*WSGLLG
Trigger: TCCCAACAGCCCTGACCATCAACAGCTCACACCTGT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR GCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGTACTGCTGGAGCCGTTaGAGAGGCAGAGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVYCWSR*RGRGSR
Trigger: CCTGCTCCCTCTGCCTCTGCAACGGCTCCAGCAGTA...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCCTTGCAGGCAAAGGTaGCACTCCGCAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVPCRQR*HSAAGA
Trigger: TGCACCTGCTGCGGAGTGGCACCTTTGCCTGCAAGG...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CCA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGAGCCAAACAGGGCCTaGCGCTCAGGTGGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: WSWDLNPASSVHATRVGPEPNRA*RSGGRR
Trigger: CCTGCGACCACCTGAGCGCCAGGCCCTGTTTGGCTC...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGCTGCTCCTGCAGGGTaGTCTGGGACCTCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVAAPAG*SGTSLS
Trigger: ACTCAGAGAGGTCCCAGACCACCCTGCAGGAGCAGC...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTACTAACAGCCAGCCCTaGCGTAGGAACCAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: DMEASEPGEGSGGESAGGTNSQP*RRNQRP
Trigger: AGGGCGCTGGTTCCTACGCCAGGGCTGGCTGTTAGT...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGGCCGAGGCTCCCCATaGGGAGGCACCACTAACAGC +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGGRGSP*GGTTNS
Trigger: GCTGTTAGTGGTGCCTCCCCATGGGGAGCCTCGGCC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGATGACACTGGGCCATaGGGTAGAGGGCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDDDTGP*GRGPCR
Trigger: CCTGCAAGGCCCTCTACCCCATGGCCCAGTGTCATC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGAGCGCTGGCAACTGCTaGAGCTGGGATTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVESAGNC*SWDLNP
Trigger: TGGGTTCAAATCCCAGCTCCAGCAGTTGCCAGCGCT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGGGAACCCAGCTCTGTaGATCTCCCCTACAGCCGTC +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVGNPAL*ISPTAV
Trigger: GACGGCTGTAGGGGAGATCCACAGAGCTGGGTTCCC...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGCTGTGCCCCAGCCCCTaGCTCCCTCTGTTGATCCCG +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALLCPSP*LPLLIP
Trigger: CGGGATCAACAGAGGGAGCCAGGGGCTGGGGCACAG...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp TGCTGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGGGCTGGCGCCGTAGATaGGCTCCCAGGAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: CWSWDLNPASSVHATRVGGWRRR*APRSQT
Trigger: TGTTTGGCTCCTGGGAGCTCATCTACGGCGCCAGCC...CCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTGCCCGTGTGAGCTGTTaGTGGTCAGGGCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFARVSC*WSGLLG
Trigger: TCCCAACAGCCCTGACCATCAACAGCTCACACGGGC...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGAGGGAAGGACAGACTaGGCAACCCACCACAAGGGC +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETEGRTD*ATHHKG
Trigger: GCCCTTGTGGTGGGTTGCTCAGTCTGTCCTTCCCTC...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGAGCAGTAGCTTCTCATaGGGGAAGGACAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVESSSFS*GKDRLS
Trigger: GCTCAGTCTGTCCTTCCCTCATGAGAAGCTACTGCT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGTGCAGCCTTGATAAATaGCGGGCCATGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVECSLDK*RAMDTA
Trigger: TGCTGTGTCCATGGCCCGTCATTTATCAAGGCTGCA...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR TCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGCGAGGAGGAGATTGGTaGCAGTCAGGCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VKAREASLLEVETKSLKLRGGDW*QSGLGG
Trigger: TCCTCCCAGGCCTGACTGTCACCAATCTCCTCCTCG...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGGACATTTCTTCAGTGTaGCTACTCTGGCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVEDISSV*LLWLEP
Trigger: GGGCTCCAGCCAGAGTAGTCACACTGAAGAAATGTC...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGCTGGACCCCCTTTTTaGGCGGTGAGGAGAGCAATG +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVAGPPF*AVRRAM
Trigger: CATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGC...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACAACAGCTGGCCCAGTTaGCACAACAGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDNSWPS*HNSWPR
Trigger: TCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTT...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGAACAGCTGGCCCAGTTaGCACAACAGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQNSWPS*HNSWPR
Trigger: TCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTT...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGTTGCCTTCAAATTCCTaGGGGGCTGTCACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVELPSNS*GAVTLR
Trigger: CCTCAAGGTGACAGCCCCTCAGGAATTTGAAGGCAA...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR TCA 90 bp TGCTGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGTTGGCGCTATGGAGGTaGGACACCCACCCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: CWSWDLNPASSVHATRVGLALWR*DTHPLH
Trigger: GTGCAGCGGGTGGGTGTCTCACCTCCATAGCGCCAA...CCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTACCCAGCTGCGGTGTTaGGTTTGGGTGCGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFTQLRC*VWVRSP
Trigger: AGGAGACCGCACCCAAACTCAACACCGCAGCTGGGT...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGCAAAAGGGCGCTCTGTaGGTCAGCCTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALQKGAL*VSLLPS
Trigger: GGAGGGGAGCAGGCTGACTCACAGAGCGCCCTTTTG...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTTACTGCTGGAGCCGTTaGAGAGGCAGAGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETYCWSR*RGRGSR
Trigger: CCTGCTCCCTCTGCCTCTGCAACGGCTCCAGCAGTA...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGGACTACGGAGAAGGTaGAGCCAGGCTGTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDGLRRR*SQAVAK
Trigger: CTTTGCCACAGCCTGGCTGCACCTTCTCCGTAGTCC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR GCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTCTCGGGAGGCGAGTCTaGTGGAGGTGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: DMEASEPGEGSGGESAGGLGRRV*WRWRQS
Trigger: ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAG...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGCTTGGCTTCCCGAAGTaGTGGGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVELGFPK*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCACTTCGGGAAGCCAAG...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCACTGCTGCTTCTGGTaGCTGTCCATCCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVHCCFW*LSIPRG
Trigger: ACCTCTGGGGATGGACAGGCACCAGAAGCAGCAGTG...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTCCCGTACACACCGTGTaGTGGGACACCCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETPVHTV*WDTPQS
Trigger: TGACTGTGGGGTGTCCCAGCACACGGTGTGTACGGG...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGCTGCTCCTGCAGGGTaGTCTGGGACCTCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETAAPAG*SGTSLS
Trigger: ACTCAGAGAGGTCCCAGACCACCCTGCAGGAGCAGC...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGTCAGCCCCTTTGCCTaGCGTCCACTGAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGVSPFA*RPLSRA
Trigger: GGCTCTGCTCAGTGGACGCCAGGCAAAGGGGCTGAC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CCA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGGGGAGGCGAGTCTGCTaGAGGTGGAGACAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQGRRVC*RWRQSL
Trigger: GAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCC...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGTCCATGCTACAAGAGTaGGGCCAGCCTTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVSMLQE*GQPWHR
Trigger: CCTGTGCCAAGGCTGGCCCCACTCTTGTAGCATGGA...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGGCCAAAGACCCTGCTaGGATGACACTGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGGQRPC*DDTGPW
Trigger: CCATGGCCCAGTGTCATCTCAGCAGGGTCTTTGGCC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGGAGGGAAGGACAGACTaGGCAACCCACCACAAGGGC +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALEGRTD*ATHHKG
Trigger: GCCCTTGTGGTGGGTTGCTCAGTCTGTCCTTCCCTC...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGTTGTACTCTTGGCTGTaGCCTATCCCTGAGGTATCC +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVELYSWL*PIPEVS
Trigger: GGATACCTCAGGGATAGGTCACAGCCAAGAGTACAA...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp CTGCTGATAGCCCAAGTCAGACTGTGGTACCAGCGTGACAGCTCCTCCTGGTCTACTCCTGGGCTGGAATaGTCCTGCCACCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLIAQVRLWYQRDSSSWSTPGLE*SCHLCF
Trigger: GAAGCAGAGGTGGCAGGATCATTCCAGCCCAGGAGT...AGACCAGGAGGAGCTGTCACGCTGGTACCACAGTCTGACTTGGGCTATCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR TCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTACTCCTGGGCTGGAATaGTCCTGCCACCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETTPGLE*SCHLCF
Trigger: GAAGCAGAGGTGGCAGGATCATTCCAGCCCAGGAGT...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGAGGAGGGACGACAGCTaGAGGTCGACTAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVERRDDS*RSTKTK
Trigger: CTTTGTTTTAGTCGACCTTCAGCTGTCGTCCCTCCT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR TCA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCACGAGGAGGAGATTGGTaGCAGTCAGGCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: WSWDLNPASSVHATRVGPRGGDW*QSGLGG
Trigger: TCCTCCCAGGCCTGACTGTCACCAATCTCCTCCTCG...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGAAACTGGAACATTCCTaGTCTCTCCCCACACAGAGG +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVEKLEHS*SLPTQR
Trigger: CCTCTGTGTGGGGAGAGATCAGGAATGTTCCAGTTT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGAAGTGGGTGAGGGTGTaGCCATTGCCTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVEKWVRV*PLPSNS
Trigger: GGAATTTGAAGGCAATGGTCACACCCTCACCCACTT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR TCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGAGGGAAGGACAGGTGTaGGCTGTTGATGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VKAREASLLEVETKSLKLREGQV*AVDGQG
Trigger: GCCCTGACCATCAACAGCTCACACCTGTCCTTCCCT...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR TCA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTGTTCCAGGAGGTTCATaGCTCCCCTCCCATACCCCA +
Preference number: 4 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFVPGGS*LPSHTP
Trigger: TGGGGTATGGGAGGGGAGTCATGAACCTCCTGGAAC...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGGAGGATCTGCCCAGTaGAGAGGATTCACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVGGSAQ*RGFTQR
Trigger: TCTCTGGGTGAATCCTCTTCACTGGGCAGATCCTCC...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGGGCAGACTCCCAGCATaGTCCAGGGTCAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALGRLPA*SRVRVH
Trigger: GTGGACTCTGACCCTGGATCATGCTGGGAGTCTGCC...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCAGCAGACCTCTTCCTaGGGACTTTGTGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVQQTSS*GLCVAQ
Trigger: CTGGGCAACACAAAGTCCTCAGGAAGAGGTCTGCTG...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGTGGACACGCCGAAGGTaGTGGTCATTCTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVEWTRRR*WSFFCF
Trigger: GAAACAGAAGAATGACCAGCACCTTCGGCGTGTCCA...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR GCA 90 bp CTGCTGATAGCCCAAGTCAGACTGTGGTACCAGCGTGACAGCTCCTCCTGGTCTGGACCATCCACGAGCTaGTGCAAGATAGCAAGCCGG +
Preference number: 4 (lower is better)
Translates to: LLIAQVRLWYQRDSSSWSGPSTS*CKIASR
Trigger: CCGGCTTGCTATCTTGCAGCAGCTCGTGGATGGTCC...AGACCAGGAGGAGCTGTCACGCTGGTACCACAGTCTGACTTGGGCTATCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR GCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCACTGTGCTTCACCTaGCAATCAGAATGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: DMEASEPGEGSGGESAGGALCFT*QSECPW
Trigger: CCAGGGGCATTCTGATTGGCAGGTGAAGCACAGTGC...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR GCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGAGACACCCACCCGCTaGACAGACCCAATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETETPTR*TDPIWE
Trigger: TTCCCAGATTGGGTCTGTGCAGCGGGTGGGTGTCTC...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGAGAGGTTGCCCCGGATaGAGGAGGATTCCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGRGCPG*RRIPPW
Trigger: CCAAGGGGGAATCCTCCTGCATCCGGGGCAACCTCT...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGAGCTCTCGTTTCCAATaGACGTACAGCCCGTACACA +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVESSRFQ*TYSPYT
Trigger: TGTGTACGGGCTGTACGTGCATTGGAAACGAGAGCT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGGTCGCAGGGTCCCCTTaGCTTTCAGGATCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQVAGSP*LSGSPK
Trigger: TTTTGGGGATCCTGAAAGCCAAGGGGACCCTGCGAC...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGGCTGCTCCTGCAGGGTaGTCTGGGACCTCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALAAPAG*SGTSLS
Trigger: ACTCAGAGAGGTCCCAGACCACCCTGCAGGAGCAGC...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGCCCAAGTCAGACTGTaGTACCAGCGTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VKAREASLLEVETKSLKLAQVRL*YQRDSS
Trigger: GGAGCTGTCACGCTGGTACCACAGTCTGACTTGGGC...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGGTGCCTAAGGACAACTaGGCCTTCTTGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVEVPKDN*AFLKSC
Trigger: ACAGCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCAC...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR CCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGCAAACTGACCATGTGTaGGACATAGGACGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVEQTDHV*DIGRRF
Trigger: GAAGCGACGTCCTATGTCCCACACATGGTCAGTTTG...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTTCCATGCTACAAGAGTaGGGCCAGCCTTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETSMLQE*GQPWHR
Trigger: CCTGTGCCAAGGCTGGCCCCACTCTTGTAGCATGGA...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGAGGAGGATTCCCCCTTaGGAGGAGGCTCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALRRIPP*EEALLG
Trigger: CCCCAGAAGAGCCTCCTCCCAAGGGGGAATCCTCCT...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp GCTTCACCTGCCAATCAGAATGCCCCTGGAGAATTGTATTCTCCTCAGGGCATTGTCGGGCAGCCCGTGTaGGCTGTTGATGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ASPANQNAPGELYSPQGIVGQPV*AVDGQG
Trigger: GCCCTGACCATCAACAGCTCACACGGGCTGCCCGAC...AATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR TCA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGGCTGTGACCTATCCCTaGGGTATCCTGAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQAVTYP*GILSSG
Trigger: TCCAGAACTCAGGATACCTCAGGGATAGGTCACAGC...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGTGCAGCCTTGATAAATaGCGGGCCATGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQCSLDK*RAMDTA
Trigger: TGCTGTGTCCATGGCCCGTCATTTATCAAGGCTGCA...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR TCA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAAACAGCTGGCCCAGTTaGCACAACAGCTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: WSWDLNPASSVHATRVGPNSWPS*HNSWPR
Trigger: TCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTT...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTACTCAGGAAAGTGGGTaGGGGTGTGACCATTGCCTT +
Preference number: 4 (lower is better)
Translates to: DMEASEPGEGSGGESAGGTQESG*GCDHCL
Trigger: AAGGCAATGGTCACACCCTCACCCACTTTCCTGAGT...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR TCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGGTTAGGCATTCCAGTTaGCTGAGTTCACTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVEVRHSS*LSSLWD
Trigger: ATCCCACAGTGAACTCAGTCAACTGGAATGCCTAAC...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR GCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCACACCCATACTAGGTaGCTAAGGACAACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVHTHTR*LRTTGP
Trigger: AGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTG...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR GCA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTCCATCCACGAGCTGCTaGAAGATAGCAAGCCGGACA +
Preference number: 4 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFPSTSC*KIASRT
Trigger: TGTCCGGCTTGCTATCTTGCAGCAGCTCGTGGATGG...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGTCCATCCCCAGAGGTTaGCCCGGATGCAGGAGGATT +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGSIPRG*PGCRRI
Trigger: AATCCTCCTGCATCCGGGGCAACCTCTGGGGATGGA...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGCGTGACAGCTCCTCCTaGTCTGTGGACATAAGCAGT +
Preference number: 4 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQRDSSS*SVDISS
Trigger: ACTGCTTATGTCCACAGACCAGGAGGAGCTGTCACG...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCGTGACAGCTCCTCCTaGTCTGTGGACATAAGCAGT +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVRDSSS*SVDISS
Trigger: ACTGCTTATGTCCACAGACCAGGAGGAGCTGTCACG...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTCTTGAACTCCTGGGCTaGAATGATCCTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: DMEASEPGEGSGGESAGGLELLG*NDPATS
Trigger: AGAGGTGGCAGGATCATTCCAGCCCAGGAGTTCAAG...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGAACCTAGCTACTTCCTaGGAGGTGGGGCGGGGACTA +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALNLATS*EVGRGL
Trigger: TAGTCCCCGCCCCACCTCCCAGGAAGTAGCTAGGTT...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR CCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGTGATCCACCCACCTTaGCTTCCCGAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGVIHPP*LPEVLG
Trigger: TCCCAGCACTTCGGGAAGCCAAGGTGGGTGGATCAC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGGGTAGGATTGCTGTTTaGCCCACCCAGCTGCGGTGT +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALGRIAV*PTQLRC
Trigger: ACACCGCAGCTGGGTGGGCCAAACAGCAATCCTACC...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGCAGGTAGAGAAACGTaGCTTCTTGACTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVAGRET*LLDSQA
Trigger: GGCTTGGGAGTCAAGAAGCCACGTTTCTCTACCTGC...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGTTGTACTCTTGGCTGTaGCCTATCCCTGAGGTATCC +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVLYSWL*PIPEVS
Trigger: GGATACCTCAGGGATAGGTCACAGCCAAGAGTACAA...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTGGCTTCAGAACCAGGTaGAGGCTCGGGAGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFGFRTR*RLGRRV
Trigger: GACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCC...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTGACATTTCTTCAGTGTaGCTACTCTGGCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFDISSV*LLWLEP
Trigger: GGGCTCCAGCCAGAGTAGTCACACTGAAGAAATGTC...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGTTATTTTTCTTTAGCTaGTCCTGCAGGGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVELFFFS*SCRVVW
Trigger: CCAGACCACCCTGCAGGAGCAGCTAAAGAAAAATAA...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTCTGAGGCCACCAGCATaGCCGCGTTCAGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFLRPPA*PRSGPK
Trigger: TTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAG...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR GCA 90 bp TGCTGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCATCCACGAGCTGCTaGAAGATAGCAAGCCGGACA +
Preference number: 4 (lower is better)
Translates to: CWSWDLNPASSVHATRVGPSTSC*KIASRT
Trigger: TGTCCGGCTTGCTATCTTGCAGCAGCTCGTGGATGG...CCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTCTTGGCTTCCCGAAGTaGTGGGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETLGFPK*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCACTTCGGGAAGCCAAG...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTCACTTCCCAAATCAGTaGTGGGAACATGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: DMEASEPGEGSGGESAGGHFPNQ*WEHGTV
Trigger: CACAGTGCCATGTTCCCAGCACTGATTTGGGAAGTG...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR GCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGCTTTGGCTCCATCTCTaGAAAAGGGCGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VKAREASLLEVETKSLKLLWLHL*KRALCE
Trigger: CTCACAGAGCGCCCTTTTGCAGAGATGGAGCCAAAG...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGAGATTCTCATACTGCTaGAGCCGTTGCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVRFSYC*SRCRGR
Trigger: TCTGCCTCTGCAACGGCTCCAGCAGTATGAGAATCT...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGAGATTCTCATACTGCTaGAGCCGTTGCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQRFSYC*SRCRGR
Trigger: TCTGCCTCTGCAACGGCTCCAGCAGTATGAGAATCT...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTCGTGACAGCTCCTCCTaGTCTGTGGACATAAGCAGT +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETRDSSS*SVDISS
Trigger: ACTGCTTATGTCCACAGACCAGGAGGAGCTGTCACG...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGGTTGGTCAGATGATCTaGAGTAGCTTGGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQVGQMI*SSLVQA
Trigger: TGCCTGGACCAAGCTACTCCAGATCATCTGACCAAC...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGAGCCTCTCAAGTAACTaGGATTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVSLSSN*DYRHLP
Trigger: TGGCAGGTGCCTGTAATCCCAGTTACTTGAGAGGCT...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGATGACCAGAGTCATTaGCGCTATGGAGGTGAGACA +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVDDQSH*RYGGET
Trigger: TGTCTCACCTCCATAGCGCCAATGACTCTGGTCATC...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTGCTTGGGAGGTGAAGTaGGTACCAGAGACAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFAWEVK*VPETSK
Trigger: CTTGCTTGTCTCTGGTACCCACTTCACCTCCCAAGC...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTAGGAGAGAGGTGAGCTaGATGAGATGGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFRREVS*MRWERR
Trigger: CCTTCTCTCCCATCTCATCCAGCTCACCTCTCTCCT...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATTTGCCTGGCGTCCACTaGGCAGAGCCTGGACACGCC +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNLPGVH*AEPGHA
Trigger: GGCGTGTCCAGGCTCTGCTCAGTGGACGCCAGGCAA...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR TCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTGGCCAAAGACCCTGCTaGGATGACACTGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFGQRPC*DDTGPW
Trigger: CCATGGCCCAGTGTCATCTCAGCAGGGTCTTTGGCC...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR TCA 90 bp TGCTGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGGCTGTGACCTATCCCTaGGGTATCCTGAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CWSWDLNPASSVHATRVGAVTYP*GILSSG
Trigger: TCCAGAACTCAGGATACCTCAGGGATAGGTCACAGC...CCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGAGGGGCTGGTTCATTTaGGGTTTAGTTGGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: VKAREASLLEVETKSLKLRGWFI*GLVGLD
Trigger: GTCCAACCCAACTAAACCTCAAATGAACCAGCCCCT...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR TCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTACAACTGGGCCTTCTTaGAGAGCTGTCCTTATTAGG +
Preference number: 4 (lower is better)
Translates to: DMEASEPGEGSGGESAGGTTGPS*RAVLIR
Trigger: CCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGT...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR TCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGACATTTCTTCAGTGTaGCTACTCTGGCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGDISSV*LLWLEP
Trigger: GGGCTCCAGCCAGAGTAGTCACACTGAAGAAATGTC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGTTCTGTTCTTGGACCTaGGTACAGTCTGGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVFCSWT*VQSGRN
Trigger: GTTTCTCCCAGACTGTACTCAGGTCCAAGAACAGAA...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR TCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTCATTTATACAGGGGATaGCCAGAGTCATTGGCGCTA +
Preference number: 4 (lower is better)
Translates to: DMEASEPGEGSGGESAGGHLYRG*PESLAL
Trigger: TAGCGCCAATGACTCTGGTCATCCCCTGTATAAATG...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGGATCTACCTACTGTTaGGGCTCCTGGAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: WSWDLNPASSVHATRVGPGSTYC*GSWRSS
Trigger: TGAGGATCTCCAGGAGCCTCAACAGTAGGTAGATCC...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTTACTGCTGGAGCCGTTaGAGAGGCAGAGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFYCWSR*RGRGSR
Trigger: CCTGCTCCCTCTGCCTCTGCAACGGCTCCAGCAGTA...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGTCTCCATCTCAAATTaGACTCTCTCTTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVVSISN*TLSWLA
Trigger: AGCCAGCCAAGAGAGAGTGCAATTTGAGATGGAGAC...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGTCTCCATCTCAAATTaGACTCTCTCTTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDVSISN*TLSWLA
Trigger: AGCCAGCCAAGAGAGAGTGCAATTTGAGATGGAGAC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp TGCTGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCTTGGCTTCCCGAAGTaGTGGGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: CWSWDLNPASSVHATRVGLGFPK*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCACTTCGGGAAGCCAAG...CCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTAGATTCTCATACTGCTaGAGCCGTTGCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFRFSYC*SRCRGR
Trigger: TCTGCCTCTGCAACGGCTCCAGCAGTATGAGAATCT...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGCTTGAACTCCTGGGCTaGAATGATCCTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGLELLG*NDPATS
Trigger: AGAGGTGGCAGGATCATTCCAGCCCAGGAGTTCAAG...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGAATGGGGACATAGGTTaGGAGCCACTGAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: VKAREASLLEVETKSLKLNGDIG*EPLSGH
Trigger: ATGTCCACTCAGTGGCTCCCAACCTATGTCCCCATT...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTAATGGGGACATAGGTTaGGAGCCACTGAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFNGDIG*EPLSGH
Trigger: ATGTCCACTCAGTGGCTCCCAACCTATGTCCCCATT...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATGGCTGGCGCCGTAGATaGGCTCCCAGGAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNGWRRR*APRSQT
Trigger: TGTTTGGCTCCTGGGAGCTCATCTACGGCGCCAGCC...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TGCTGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGTTGTACTCTTGGCTGTaGCCTATCCCTGAGGTATCC +
Preference number: 4 (lower is better)
Translates to: CWSWDLNPASSVHATRVGLYSWL*PIPEVS
Trigger: GGATACCTCAGGGATAGGTCACAGCCAAGAGTACAA...CCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp GCTTCACCTGCCAATCAGAATGCCCCTGGAGAATTGTATTCTCCTCAGGGCATTGCTGGACCCCCTTTTTaGGCGGTGAGGAGAGCAATG +
Preference number: 4 (lower is better)
Translates to: ASPANQNAPGELYSPQGIAGPPF*AVRRAM
Trigger: CATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGC...AATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR GCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTGGACCATCCACGAGCTaGTGCAAGATAGCAAGCCGG +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFGPSTS*CKIASR
Trigger: CCGGCTTGCTATCTTGCAGCAGCTCGTGGATGGTCC...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTCTCCAGGCCTCACTGTaGAACTGCTGCTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFLQASL*NCCCHC
Trigger: GCAGTGACAGCAGCAGTTGCACAGTGAGGCCTGGAG...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp GCTTCACCTGCCAATCAGAATGCCCCTGGAGAATTGTATTCTCCTCAGGGCATTGAGAGCTCCATGCCCTaGCTGAGGGATCGACACTTC +
Preference number: 4 (lower is better)
Translates to: ASPANQNAPGELYSPQGIESSMP*LRDRHF
Trigger: GAAGTGTCGATCCCTCAGCCAGGGCATGGAGCTCTC...AATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGGGACCTCTCTGAGTTaGCAGCAAATTGGTTATAGA +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDGTSLS*QQIGYR
Trigger: TCTATAACCAATTTGCTGCCAACTCAGAGAGGTCCC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATGTCAGCCCCTTTGCCTaGCGTCCACTGAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNVSPFA*RPLSRA
Trigger: GGCTCTGCTCAGTGGACGCCAGGCAAAGGGGCTGAC...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CCA 90 bp GCTTCACCTGCCAATCAGAATGCCCCTGGAGAATTGTATTCTCCTCAGGGCATTCAAGGGCCTCCTGAGTaGCCAAAGACCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ASPANQNAPGELYSPQGIQGPPE*PKTLLR
Trigger: TCTCAGCAGGGTCTTTGGCCACTCAGGAGGCCCTTG...AATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGTGCCTAAGGACAACTaGGCCTTCTTGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGVPKDN*AFLKSC
Trigger: ACAGCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCAC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR CCA 90 bp GCTTCACCTGCCAATCAGAATGCCCCTGGAGAATTGTATTCTCCTCAGGGCATTGGGAGGCGAGTCTGCTaGAGGTGGAGACAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: ASPANQNAPGELYSPQGIGRRVC*RWRQSL
Trigger: GAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCC...AATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGCAAACTGACCATGTGTaGGACATAGGACGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALQTDHV*DIGRRF
Trigger: GAAGCGACGTCCTATGTCCCACACATGGTCAGTTTG...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGGGAGAAAGGAAAGATaGTGTACTCACTCATTTGGG +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDGRKER*CTHSFG
Trigger: CCCAAATGAGTGAGTACACCATCTTTCCTTTCTCCC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTTACTGTTTGAGGGTTTaGCAGACTCCCAGCATGATC +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETYCLRV*QTPSMI
Trigger: GATCATGCTGGGAGTCTGCCAAACCCTCAAACAGTA...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACATCCCTGAGGTATCCTaGGTTCTGGAATCTATAAGA +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDIPEVS*VLESIR
Trigger: TCTTATAGATTCCAGAACTCAGGATACCTCAGGGAT...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTCAAAGTCTGTTTTCATaGTGGAGTGCTCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETQSLFS*WSAPVC
Trigger: ACACACAGGAGCACTCCATCATGAAAACAGACTTTG...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR TCA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGATTATGAGGTTATTTTaGGGATCCAGGGAGGTAACG +
Preference number: 4 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQIMRLF*GSREVT
Trigger: CGTTACCTCCCTGGATCCTCAAAATAACCTCATAAT...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGTTTGGGACTCAGGACTaGAGTGCCCACTCACTTTTT +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALFGTQD*SAHSLF
Trigger: AAAAAGTGAGTGGGCACTTCAGTCCTGAGTCCCAAA...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGAGAAACGTGGCTTCTTaGCTCCCAAGCCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGRNVAS*LPSQEF
Trigger: AAATTCCTGGCTTGGGAGTCAAGAAGCCACGTTTCT...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGAAAATGAGTGAGCTGTaGGACTTTGGCTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: VKAREASLLEVETKSLKLKMSEL*DFGSIS
Trigger: AGAGATGGAGCCAAAGTCTCACAGCTCACTCATTTT...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCATTTGAAAAATGAGTaGGCTGTGAGACTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVHLKNE*AVRLWL
Trigger: GAGCCAAAGTCTCACAGCTCACTCATTTTTCAAATG...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCACCAAAAAGTACTGTTTaGGGGTTTGGCAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: WSWDLNPASSVHATRVGPPKSTV*GFGRLP
Trigger: TGGGAGTCTGCCAAACCCTCAAACAGTACTTTTTGG...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTTTATTTTTCTTTAGCTaGTCCTGCAGGGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETLFFFS*SCRVVW
Trigger: CCAGACCACCCTGCAGGAGCAGCTAAAGAAAAATAA...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATCCTTGCAGGCAAAGGTaGCACTCCGCAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNPCRQR*HSAAGA
Trigger: TGCACCTGCTGCGGAGTGGCACCTTTGCCTGCAAGG...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR GCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGTCTCCATCTCAAATTaGACTCTCTCTTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGVSISN*TLSWLA
Trigger: AGCCAGCCAAGAGAGAGTGCAATTTGAGATGGAGAC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGACCTGCCAATCAGAATaGCCCTGGAGAATTGTATTC +
Preference number: 4 (lower is better)
Translates to: VKAREASLLEVETKSLKLTCQSE*PWRIVF
Trigger: GAATACAATTCTCCAGGGGCATTCTGATTGGCAGGT...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR GCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTTGGGCGAGGAGGATCTaGCCAGTGAAGAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFWARRI*PVKRIH
Trigger: GTGAATCCTCTTCACTGGGCAGATCCTCCTCGCCCA...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGGACCTCTCTGAGTTaGCAGCAAATTGGTTATAGA +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETGTSLS*QQIGYR
Trigger: TCTATAACCAATTTGCTGCCAACTCAGAGAGGTCCC...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGCCACTGAGCAGAGCCTaGACACGCCGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVPLSRA*TRRRCW
Trigger: CCAGCACCTTCGGCGTGTCCAGGCTCTGCTCAGTGG...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCATTTGAGGTTTAGTTaGGTTGGACTTGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVHLRFS*VGLGFL
Trigger: CAGGAAACCAAGTCCAACCCAACTAAACCTCAAATG...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR CCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTATAAATGACGGGCCATaGACACAGCACAGAGCTTAT +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETINDGP*TQHRAY
Trigger: ATAAGCTCTGTGCTGTGTCCATGGCCCGTCATTTAT...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR CCA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGTTTTTCGATCCTAGTTaGTTGTACACACCCATACTA +
Preference number: 4 (lower is better)
Translates to: WRLQNQVKAREASLLEVEFFDPS*LYTPIL
Trigger: TAGTATGGGTGTGTACAACCAACTAGGATCGAAAAA...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR CCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGGAGACATTATTTTaGAAGGCTCCAGTAAGCACT +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVEETLF*KAPVST
Trigger: AGTGCTTACTGGAGCCTTCCAAAATAATGTCTCCTC...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACCAATCAGAATGCCCCTaGAGAATTGTATTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDQSECP*RIVFSS
Trigger: TGAGGAGAATACAATTCTCCAGGGGCATTCTGATTG...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTAGCGCTGGCAACTGCTaGAGCTGGGATTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFSAGNC*SWDLNP
Trigger: TGGGTTCAAATCCCAGCTCCAGCAGTTGCCAGCGCT...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGCTTCCAGTCCCCGGTaGATATCCGCCCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEASSPR*ISAPSS
Trigger: CGAGCTGGGGGCGGATATCCACCGGGGACTGGAAGC...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGTGTACTCACTCATTTaGGACTCAGGACTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGVYSLI*DSGLKC
Trigger: GCACTTCAGTCCTGAGTCCCAAATGAGTGAGTACAC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATGGGAAGATGACCCACTaGGCGAGGAGGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNGKMTH*ARRICP
Trigger: TGGGCAGATCCTCCTCGCCCAGTGGGTCATCTTCCC...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGCAGGCAAACAGAAAGTaGCCTTTGTCAAATCATGAA +
Preference number: 4 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQQANRK*PLSNHE
Trigger: TTCATGATTTGACAAAGGTCACTTTCTGTTTGCCTG...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGGCTTCAGAACCAGGTaGAGGCTCGGGAGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEGFRTR*RLGRRV
Trigger: GACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCC...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGATAGACTAGGATTGTaGTTCTCTGAGGTAAAAACC +
Preference number: 4 (lower is better)
Translates to: DMEASEPGEGSGGESAGGDRLGL*FSEVKT
Trigger: GGTTTTTACCTCAGAGAATCACAATCCTAGTCTATC...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATCCACAGCGCCTGGCCTaGAGCAGCCACTCACTTTTA +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNPQRLA*SSHSLL
Trigger: TAAAAGTGAGTGGCTGCTTCAGGCCAGGCGCTGTGG...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATCTCGGGAGGCGAGTCTaGTGGAGGTGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNLGRRV*WRWRQS
Trigger: ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAG...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATTTTGGCCCACCCAGCTaGGGTGTTGAGTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNFGPPS*GVEFGC
Trigger: GCACCCAAACTCAACACCGCAGCTGGGTGGGCCAAA...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGGGACCTCTCTGAGTTaGCAGCAAATTGGTTATAGA +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGGTSLS*QQIGYR
Trigger: TCTATAACCAATTTGCTGCCAACTCAGAGAGGTCCC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGACCTGAGTACAGTCTaGGAGAAACATAATGTAGCA +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETDLSTV*EKHNVA
Trigger: TGCTACATTATGTTTCTCCCAGACTGTACTCAGGTC...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATTCGCCAGGAAGGGATTaGGGCTCTAAGCTTGAGCGG +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNSPGRD*GSKLER
Trigger: CCGCTCAAGCTTAGAGCCCCAATCCCTTCCTGGCGA...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGGTACACACCGTGTGCTaGGACACCCCACAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVVHTVC*DTPQSA
Trigger: GGCTGACTGTGGGGTGTCCCAGCACACGGTGTGTAC...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGACCTTTGTCAAATCATaGAGGGTTCTGTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: IWRLQNQVKAREASLLEVTFVKS*RVLFCS
Trigger: TGAACAAAACAGAACCCTTCATGATTTGACAAAGGT...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGTGGAGACAAAGTCTCTaGAACTGGAACATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGWRQSL*NWNIPD
Trigger: ATCAGGAATGTTCCAGTTTCAGAGACTTTGTCTCCA...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGGCTGGACCCCCTTTTTaGGCGGTGAGGAGAGCAATG +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVAGPPF*AVRRAM
Trigger: CATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGC...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGGCTGGAGCTGGGATTTaGACCCAGCTAGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVAGAGI*TQLAVS
Trigger: GGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGC...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAACTCTTCTGGGGAAGATaGCCCACTGGGCGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AFQYYEVILRIQGGNGCELFWGR*PTGRGG
Trigger: TCCTCCTCGCCCAGTGGGTCATCTTCCCCAGAAGAG...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTTGGACACGCCGAAGGTaGTGGTCATTCTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFWTRRR*WSFFCF
Trigger: GAAACAGAAGAATGACCAGCACCTTCGGCGTGTCCA...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR GCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAATGGGGTAGAGGGCCTTaGAGGCAAAGGTGCCACTCC +
Preference number: 4 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEWGRGP*RQRCHS
Trigger: GGAGTGGCACCTTTGCCTGCAAGGCCCTCTACCCCA...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR GCA 90 bp ATCCTGAGTTCTGGAATCTATAAGATTCCTCTAGTTTTTCTGGCTGCTGATAGCCTGAGGCCACCAGCATaGCCGCGTTCAGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: ILSSGIYKIPLVFLAADSLRPPA*PRSGPK
Trigger: TTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAG...GCTATCAGCAGCCAGAAAAACTAGAGGAATCTTATAGATTCCAGAACTCAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR GCA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACCAAATTTTGGCTTTGTaGATGAACTGTCTAACAACC +
Preference number: 4 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDQILAL*MNCLTT
Trigger: GGTTGTTAGACAGTTCATGCACAAAGCCAAAATTTG...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR GCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAACTCTGTGAGTCAGCCTaGTCCCCTCCAGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: AFQYYEVILRIQGGNGCELCESA*SPPGLL
Trigger: GAGCAAGCCTGGAGGGGAGCAGGCTGACTCACAGAG...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATGTCGCAGGGTCCCCTTaGCTTTCAGGATCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNVAGSP*LSGSPK
Trigger: TTTTGGGGATCCTGAAAGCCAAGGGGACCCTGCGAC...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGCAAGGGCCTCCTGAGTaGCCAAAGACCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVQGPPE*PKTLLR
Trigger: TCTCAGCAGGGTCTTTGGCCACTCAGGAGGCCCTTG...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTAATGGGGACATAGGTTaGGAGCCACTGAGTGGACAT +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFNGDIG*EPLSGH
Trigger: ATGTCCACTCAGTGGCTCCCAACCTATGTCCCCATT...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATTCAGTGCTGGGAACATaGCACTGTGCTTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNSVLGT*HCASPA
Trigger: GGCAGGTGAAGCACAGTGCCATGTTCCCAGCACTGA...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR TCA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTACCTTTGTCAAATCATaGAGGGTTCTGTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GEGSGGESAGGGDKVSETTFVKS*RVLFCS
Trigger: TGAACAAAACAGAACCCTTCATGATTTGACAAAGGT...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp CTGCTGATAGCCCAAGTCAGACTGTGGTACCAGCGTGACAGCTCCTCCTGGTCTAGAGCAATGATTCTGTaGATTTTTGGGGAATTTGTG +
Preference number: 4 (lower is better)
Translates to: LLIAQVRLWYQRDSSSWSRAMIL*IFGEFV
Trigger: CACAAATTCCCCAAAAATTCACAGAATCATTGCTCT...AGACCAGGAGGAGCTGTCACGCTGGTACCACAGTCTGACTTGGGCTATCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR TCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGATAGACTAGGATTGTaGTTCTCTGAGGTAAAAACC +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGDRLGL*FSEVKT
Trigger: GGTTTTTACCTCAGAGAATCACAATCCTAGTCTATC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGATAGACTAGGATTGTaGTTCTCTGAGGTAAAAACC +
Preference number: 4 (lower is better)
Translates to: WSWDLNPASSVHATRVGPDRLGL*FSEVKT
Trigger: GGTTTTTACCTCAGAGAATCACAATCCTAGTCTATC...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGGGCCTTCCAATATTATaGGGTTATTTTGAGGATCCA +
Preference number: 4 (lower is better)
Translates to: WDLNPASSVHATRVGPALGLPIL*GYFEDP
Trigger: TGGATCCTCAAAATAACCTCATAATATTGGAAGGCC...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGGACCATCCACGAGCTaGTGCAAGATAGCAAGCCGG +
Preference number: 4 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEGPSTS*CKIASR
Trigger: CCGGCTTGCTATCTTGCAGCAGCTCGTGGATGGTCC...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGGTCGCAGGGTCCCCTTaGCTTTCAGGATCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVVAGSP*LSGSPK
Trigger: TTTTGGGGATCCTGAAAGCCAAGGGGACCCTGCGAC...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTTTCCCAAATCAGTGCTaGGAACATGGCACTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFFPNQC*EHGTVL
Trigger: AAGCACAGTGCCATGTTCCCAGCACTGATTTGGGAA...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CCA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGACAAAGAAGGTAAGTaGTCATCAATCTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGDKEGK*SSISKS
Trigger: GGATTTGGAGATTGATGACCACTTACCTTCTTTGTC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGTGTCACTGCTGCTTCTaGTGCCTGTCCATCCCCAGA +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVCHCCF*CLSIPR
Trigger: TCTGGGGATGGACAGGCACCAGAAGCAGCAGTGACA...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGAGCAGTAGCTTCTCATaGGGGAAGGACAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVSSSFS*GKDRLS
Trigger: GCTCAGTCTGTCCTTCCCTCATGAGAAGCTACTGCT...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATAGGAGGGACGACAGCTaGAGGTCGACTAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNRRDDS*RSTKTK
Trigger: CTTTGTTTTAGTCGACCTTCAGCTGTCGTCCCTCCT...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR TCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATAAACTGGAACATTCCTaGTCTCTCCCCACACAGAGG +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNKLEHS*SLPTQR
Trigger: CCTCTGTGTGGGGAGAGATCAGGAATGTTCCAGTTT...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGTCACTGTGCAACTGCTaGTGTCACTGCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVSLCNC*CHCCFW
Trigger: CCAGAAGCAGCAGTGACAGCAGCAGTTGCACAGTGA...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp ATCCTGAGTTCTGGAATCTATAAGATTCCTCTAGTTTTTCTGGCTGCTGATAGCGCCCAAGTCAGACTGTaGTACCAGCGTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ILSSGIYKIPLVFLAADSAQVRL*YQRDSS
Trigger: GGAGCTGTCACGCTGGTACCACAGTCTGACTTGGGC...GCTATCAGCAGCCAGAAAAACTAGAGGAATCTTATAGATTCCAGAACTCAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR CCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATGTTGGTCAGATGATCTaGAGTAGCTTGGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNVGQMI*SSLVQA
Trigger: TGCCTGGACCAAGCTACTCCAGATCATCTGACCAAC...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGCTTGAACTCCTGGGCTaGAATGATCCTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVLELLG*NDPATS
Trigger: AGAGGTGGCAGGATCATTCCAGCCCAGGAGTTCAAG...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGAGGGGCTGGTTCATTTaGGGTTTAGTTGGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVRGWFI*GLVGLD
Trigger: GTCCAACCCAACTAAACCTCAAATGAACCAGCCCCT...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR TCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGAAACTGGAACATTCCTaGTCTCTCCCCACACAGAGG +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVKLEHS*SLPTQR
Trigger: CCTCTGTGTGGGGAGAGATCAGGAATGTTCCAGTTT...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAACTTGGCACAGGAGGTTaGTTGCTGCAGCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: AFQYYEVILRIQGGNGCELGTGG*LLQPVF
Trigger: AAACACTGGCTGCAGCAATCAACCTCCTGTGCCAAG...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTATTATGAGGTTATTTTaGGGATCCAGGGAGGTAACG +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFIMRLF*GSREVT
Trigger: CGTTACCTCCCTGGATCCTCAAAATAACCTCATAAT...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGGTGTTGAGTTTGGGTaGGGTCTCCTGTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEGVEFG*GLLCFA
Trigger: TGCAAAGCACAGGAGACCGCACCCAAACTCAACACC...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
3UTR CAA 72 bp TGTGCTTCACCTGCCAATCAGAATGCCCCTGGAGAATaGTATTCTCCTCAGGGCATTGCTTTAAGAGCACTA +
Preference number: 4 (lower is better)
Translates to: CASPANQNAPGE*YSPQGIALRAL
Trigger: TAGTGCTCTTAAAGCAATGCCCTGAGGAGAATACAATTCTCCAGGGGCATTCTGATTGGCAGGTGAAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR TCA 90 bp ATCCTGAGTTCTGGAATCTATAAGATTCCTCTAGTTTTTCTGGCTGCTGATAGCGGTCTGGGACCTCTCTaGGTTGGCAGCAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: ILSSGIYKIPLVFLAADSGLGPL*VGSKLV
Trigger: AACCAATTTGCTGCCAACTCAGAGAGGTCCCAGACC...GCTATCAGCAGCCAGAAAAACTAGAGGAATCTTATAGATTCCAGAACTCAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR TCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATCAAAGTCTGTTTTCATaGTGGAGTGCTCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNQSLFS*WSAPVC
Trigger: ACACACAGGAGCACTCCATCATGAAAACAGACTTTG...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR TCA 90 bp ATCCTGAGTTCTGGAATCTATAAGATTCCTCTAGTTTTTCTGGCTGCTGATAGCAGCAGTAGCTTCTCATaGGGGAAGGACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: ILSSGIYKIPLVFLAADSSSSFS*GKDRCE
Trigger: CTCACACCTGTCCTTCCCTCATGAGAAGCTACTGCT...GCTATCAGCAGCCAGAAAAACTAGAGGAATCTTATAGATTCCAGAACTCAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR TCA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTGGCCTTCCAATATTATaGGGTTATTTTGAGGATCCA +
Preference number: 4 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFGLPIL*GYFEDP
Trigger: TGGATCCTCAAAATAACCTCATAATATTGGAAGGCC...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR GCA 90 bp ATCCTGAGTTCTGGAATCTATAAGATTCCTCTAGTTTTTCTGGCTGCTGATAGCCACACCCATACTAGGTaGCTAAGGACAACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ILSSGIYKIPLVFLAADSHTHTR*LRTTGP
Trigger: AGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTG...GCTATCAGCAGCCAGAAAAACTAGAGGAATCTTATAGATTCCAGAACTCAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR CCA 90 bp TTGGAAGGCTCCAGTAAGCACTATGGAAAGAAGATACATAAAGGACAAATTTTGAACCTAGCTACTTCCTaGGAGGTGGGGCGGGGACTA +
Preference number: 4 (lower is better)
Translates to: LEGSSKHYGKKIHKGQILNLATS*EVGRGL
Trigger: TAGTCCCCGCCCCACCTCCCAGGAAGTAGCTAGGTT...CAAAATTTGTCCTTTATGTATCTTCTTTCCATAGTGCTTACTGGAGCCTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGTTTGTGACATCGTTTTaGTCGCCAGGAAGGGATTGG +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVFVTSF*SPGRDW
Trigger: CCAATCCCTTCCTGGCGACCAAAACGATGTCACAAA...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAATTTGGGGAAAGGGGTTaGAGACCATACAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEFGERG*RPYKAE
Trigger: CTCTGCCTTGTATGGTCTCCAACCCCTTTCCCCAAA...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR TCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATTGGAGACAAAGTCTCTaGAACTGGAACATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNWRQSL*NWNIPD
Trigger: ATCAGGAATGTTCCAGTTTCAGAGACTTTGTCTCCA...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TTGGAAGGCTCCAGTAAGCACTATGGAAAGAAGATACATAAAGGACAAATTTTGGGTCTGGGACCTCTCTaGGTTGGCAGCAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: LEGSSKHYGKKIHKGQILGLGPL*VGSKLV
Trigger: AACCAATTTGCTGCCAACTCAGAGAGGTCCCAGACC...CAAAATTTGTCCTTTATGTATCTTCTTTCCATAGTGCTTACTGGAGCCTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGCATTTGAGGTTTAGTTaGGTTGGACTTGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVHLRFS*VGLGFL
Trigger: CAGGAAACCAAGTCCAACCCAACTAAACCTCAAATG...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR CCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAATAAATGACGGGCCATaGACACAGCACAGAGCTTAT +
Preference number: 4 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEINDGP*TQHRAY
Trigger: ATAAGCTCTGTGCTGTGTCCATGGCCCGTCATTTAT...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR TCA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATAGAGCAATGATTCTGTaGATTTTTGGGGAATTTGTG +
Preference number: 4 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNRAMIL*IFGEFV
Trigger: CACAAATTCCCCAAAAATTCACAGAATCATTGCTCT...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp TTGGAAGGCTCCAGTAAGCACTATGGAAAGAAGATACATAAAGGACAAATTTTGACAACTGGGCCTTCTTaGAGAGCTGTCCTTATTAGG +
Preference number: 4 (lower is better)
Translates to: LEGSSKHYGKKIHKGQILTTGPS*RAVLIR
Trigger: CCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGT...CAAAATTTGTCCTTTATGTATCTTCTTTCCATAGTGCTTACTGGAGCCTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CCA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGTTTTTCGATCCTAGTTaGTTGTACACACCCATACTA +
Preference number: 4 (lower is better)
Translates to: YYEVILRIQGGNGCEERVFFDPS*LYTPIL
Trigger: TAGTATGGGTGTGTACAACCAACTAGGATCGAAAAA...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR TCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAACCTTTGTCAAATCATaGAGGGTTCTGTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AFQYYEVILRIQGGNGCETFVKS*RVLFCS
Trigger: TGAACAAAACAGAACCCTTCATGATTTGACAAAGGT...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR TCA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAAGAGCAATGATTCTGTaGATTTTTGGGGAATTTGTG +
Preference number: 4 (lower is better)
Translates to: AFQYYEVILRIQGGNGCERAMIL*IFGEFV
Trigger: CACAAATTCCCCAAAAATTCACAGAATCATTGCTCT...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
3UTR CAA 72 bp AAGCACTATGGAAAGAAGATACATAAAGGACAAATTTaGGCTTTGTGCATGAACTGTCTAACAACCAAAGTT +
Preference number: 4 (lower is better)
Translates to: KHYGKKIHKGQI*ALCMNCLTTKV
Trigger: AACTTTGGTTGTTAGACAGTTCATGCACAAAGCCAAAATTTGTCCTTTATGTATCTTCTTTCCATAGTGCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS GCA 90 bp CGGGCGGTGCAGGCGCGTTTCCGCTCCCAGCGGGCACGCTGCTCTTaGACCGGGCACCGCGAACCGGGGCAGGAGAGCTCCATGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RAVQARFRSQRARCS*TGHREPGQESSMPW
Trigger: CCAGGGCATGGAGCTCTCCTGCCCCGGTTCGCGGTGCCCGGTGCAAGAGCAGCGTGCCCGCTGGGAGCGGAAACGCGCCTGCACCGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490970.5
CDS GCA 90 bp AGCTCCCGGGCGGTGCAGGCGCGTTTCCGCTCCCAGCGGGCACGCTaGTCTTGCACCGGGCACCGCGAACCGGGGCAGGAGAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: SSRAVQARFRSQRAR*SCTGHREPGQESSM
Trigger: CATGGAGCTCTCCTGCCCCGGTTCGCGGTGCCCGGTGCAAGAGCAGCGTGCCCGCTGGGAGCGGAAACGCGCCTGCACCGCCCGGGAGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490970.5
CDS GCA 90 bp GCTGTTCTTGGTAGCGCCGCTCGGTCTCTAGCAGCTCCCGGGCGGTaGAGGCGCGTTTCCGCTCCCAGCGGGCACGCTGCTCTTGCACCG +
Preference number: 5 (lower is better)
Translates to: AVLGSAARSLAAPGR*RRVSAPSGHAALAP
Trigger: CGGTGCAAGAGCAGCGTGCCCGCTGGGAGCGGAAACGCGCCTGCACCGCCCGGGAGCTGCTAGAGACCGAGCGGCGCTACCAAGAACAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490970.5
CDS TCA 90 bp CCAATCTGGGAACCCAGCTCTGTGGATCTCCCCTACAGCCGTCCCTaGACACTGGTCCCGGGCGTCCCACCCGCCGCCCACCGTCCCACC +
Preference number: 5 (lower is better)
Translates to: PIWEPSSVDLPYSRP*TLVPGVPPAAHRPT
Trigger: GGTGGGACGGTGGGCGGCGGGTGGGACGCCCGGGACCAGTGTTCAGGGACGGCTGTAGGGGAGATCCACAGAGCTGGGTTCCCAGATTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACGCGGGCACGCTGCTCTaGCACCGGGCACCGCGAACC +
Preference number: 5 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDAGTLL*HRAPRT
Trigger: GGTTCGCGGTGCCCGGTGCAAGAGCAGCGTGCCCGC...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS CCA 90 bp AGCACATCAGTGAAGAGGAAGAACATGCGGGGCCGAGGCTCCCCATaGGGAGGCACCACTAACAGCCAGCCCTGGCGTAGGAACCAGCGC +
Preference number: 5 (lower is better)
Translates to: STSVKRKNMRGRGSP*GGTTNSQPWRRNQR
Trigger: GCGCTGGTTCCTACGCCAGGGCTGGCTGTTAGTGGTGCCTCCCCATGGGGAGCCTCGGCCCCGCATGTTCTTCCTCTTCACTGATGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000490638.5
ENST00000490970.5
CDS-3UTR CAA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGCAGCCCCAGCTGTTCTaGGTAGCGCCGCTCGGTCTC +
Preference number: 5 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQQPQLF*VAPLGL
Trigger: GAGACCGAGCGGCGCTACCAAGAACAGCTGGGGCTG...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR CAA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGAGTGGAGGCCGAGGCTaGGCCATGAGGAGCACATCA +
Preference number: 5 (lower is better)
Translates to: WRLQNQVKAREASLLEVESGGRG*AMRSTS
Trigger: TGATGTGCTCCTCATGGCCAAGCCTCGGCCTCCACT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS TCA 90 bp GTAGGAACCAGCGCCCTGAGGTCAGCCCCTTTGCCTGGCGTCCACTaGGCAGAGCCTGGACACGCCGAAGGTGCTGGTCATTCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: VGTSALRSAPLPGVH*AEPGHAEGAGHSSV
Trigger: AACAGAAGAATGACCAGCACCTTCGGCGTGTCCAGGCTCTGCTCAGTGGACGCCAGGCAAAGGGGCTGACCTCAGGGCGCTGGTTCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CAA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGCACCCAGCTGCGGTGTaGAGTTTGGGTGCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQHPAAV*SLGAVS
Trigger: GGAGACCGCACCCAAACTCAACACCGCAGCTGGGTG...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGAGCCCGTGTGAGCTGTaGATGGTCAGGGCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: IWRLQNQVKAREASLLEVSPCEL*MVRAVG
Trigger: CCCAACAGCCCTGACCATCAACAGCTCACACGGGCT...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS-3UTR CAA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGAGCTGGACCCCCTTTTaGAGCGGTGAGGAGAGCAAT +
Preference number: 5 (lower is better)
Translates to: WRLQNQVKAREASLLEVESWTPF*SGEESN
Trigger: ATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCT...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGCGGTCTCCTGTGCTTaGCACCTGGCCCGCTTAAGG +
Preference number: 5 (lower is better)
Translates to: VKAREASLLEVETKSLKLAVSCA*HLARLR
Trigger: CCTTAAGCGGGCCAGGTGCAAAGCACAGGAGACCGC...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS GCA 90 bp GATGACCAGAGTCATTGGCGCTATGGAGGTGAGACACCCACCCGCTaGACAGACCCAATCTGGGAACCCAGCTCTGTGGATCTCCCCTAC +
Preference number: 5 (lower is better)
Translates to: DDQSHWRYGGETPTR*TDPIWEPSSVDLPY
Trigger: GTAGGGGAGATCCACAGAGCTGGGTTCCCAGATTGGGTCTGTGCAGCGGGTGGGTGTCTCACCTCCATAGCGCCAATGACTCTGGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGCAACAGCTGGCCCAGTaGACACAACAGCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: VKAREASLLEVETKSLKLQQLAQ*TQQLAQ
Trigger: CTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTG...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTGTGAGGAGTAGTCACTaGCTCGAGGTCACCCAGCGC +
Preference number: 5 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFVRSSH*LEVTQR
Trigger: GCGCTGGGTGACCTCGAGCAAGTGACTACTCCTCAC...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGCTGCGGTGTTGAGTTaGGGTGCGGTCTCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: GEGSGGESAGGGDKVSETAAVLS*GAVSCA
Trigger: AGCACAGGAGACCGCACCCAAACTCAACACCGCAGC...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGTGCAAGCTGGTAGGATaGCTGTTTGGCCCACCCAGC +
Preference number: 5 (lower is better)
Translates to: IWRLQNQVKAREASLLEVCKLVG*LFGPPS
Trigger: GCTGGGTGGGCCAAACAGCAATCCTACCAGCTTGCA...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS TCA 90 bp GAGGAAGCCTCCAGCCTGCGTTGCCGAGGAGCAAGAACCTACGTGTaGGCTGTTGATGGTCAGGGCTGTTGGGACCTGTGTTTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: EEASSLRCRGARTYV*AVDGQGCWDLCFQP
Trigger: TGGCTGAAAACACAGGTCCCAACAGCCCTGACCATCAACAGCTCACACGTAGGTTCTTGCTCCTCGGCAACGCAGGCTGGAGGCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS-3UTR CAA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGATACTGCTGGAGCCGTaGCAGAGGCAGAGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGILLEP*QRQREQ
Trigger: CTGCTCCCTCTGCCTCTGCAACGGCTCCAGCAGTAT...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGATACTGCTGGAGCCGTaGCAGAGGCAGAGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: WDLNPASSVHATRVGPALILLEP*QRQREQ
Trigger: CTGCTCCCTCTGCCTCTGCAACGGCTCCAGCAGTAT...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGAGCCCGTGTGAGCTGTaGATGGTCAGGGCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: WDLNPASSVHATRVGPALSPCEL*MVRAVG
Trigger: CCCAACAGCCCTGACCATCAACAGCTCACACGGGCT...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAATGGGGACATAGGTaGGGAGCCACTGAGTGGACA +
Preference number: 5 (lower is better)
Translates to: IWRLQNQVKAREASLLEVEWGHR*GATEWT
Trigger: TGTCCACTCAGTGGCTCCCAACCTATGTCCCCATTC...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTAGCTGGACCCCCTTTTaGAGCGGTGAGGAGAGCAAT +
Preference number: 5 (lower is better)
Translates to: DMEASEPGEGSGGESAGGSWTPF*SGEESN
Trigger: ATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCT...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp TGCTGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCAACAGCTGGCCCAGTaGACACAACAGCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: CWSWDLNPASSVHATRVGQQLAQ*TQQLAQ
Trigger: CTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTG...CCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp CTGCTGATAGCCCAAGTCAGACTGTGGTACCAGCGTGACAGCTCCTCCTGGTCTGACAGGTGTGAGCTGTaGATGGTCAGGGCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: LLIAQVRLWYQRDSSSWSDRCEL*MVRAVG
Trigger: CCCAACAGCCCTGACCATCAACAGCTCACACCTGTC...AGACCAGGAGGAGCTGTCACGCTGGTACCACAGTCTGACTTGGGCTATCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR CAA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGCCTTGGCACAGGAGGTaGATTGCTGCAGCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQPWHRR*IAAASV
Trigger: AACACTGGCTGCAGCAATCAACCTCCTGTGCCAAGG...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACCCTGAGGACTTTGTGTaGCCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDPEDFV*PRLVLN
Trigger: GTTCAAGACCAGCCTGGGCAACACAAAGTCCTCAGG...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS TCA 90 bp CTCCAGCCTGCGTTGCCGAGGAGCAAGAACCTACGTGTGAGCTGTTaGTGGTCAGGGCTGTTGGGACCTGTGTTTTCAGCCAAAGCTACG +
Preference number: 5 (lower is better)
Translates to: LQPALPRSKNLRVSC*WSGLLGPVFSAKAT
Trigger: CGTAGCTTTGGCTGAAAACACAGGTCCCAACAGCCCTGACCATCAACAGCTCACACGTAGGTTCTTGCTCCTCGGCAACGCAGGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS GCA 90 bp TTTGGCCCACCCAGCTGCGGTGTTGAGTTTGGGTGCGGTCTCCTGTaGTTTGCACCTGGCCCGCTTAAGGCATTTGTTACCCGTAATGCT +
Preference number: 5 (lower is better)
Translates to: FGPPSCGVEFGCGLL*FAPGPLKAFVTRNA
Trigger: AGCATTACGGGTAACAAATGCCTTAAGCGGGCCAGGTGCAAAGCACAGGAGACCGCACCCAAACTCAACACCGCAGCTGGGTGGGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS GCA 90 bp GTAGGATTGCTGTTTGGCCCACCCAGCTGCGGTGTTGAGTTTGGGTaGGGTCTCCTGTGCTTTGCACCTGGCCCGCTTAAGGCATTTGTT +
Preference number: 5 (lower is better)
Translates to: VGLLFGPPSCGVEFG*GLLCFAPGPLKAFV
Trigger: AACAAATGCCTTAAGCGGGCCAGGTGCAAAGCACAGGAGACCGCACCCAAACTCAACACCGCAGCTGGGTGGGCCAAACAGCAATCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS GCA 90 bp GACAATGATTGCAAGCTGGTAGGATTGCTGTTTGGCCCACCCAGCTaGGGTGTTGAGTTTGGGTGCGGTCTCCTGTGCTTTGCACCTGGC +
Preference number: 5 (lower is better)
Translates to: DNDCKLVGLLFGPPS*GVEFGCGLLCFAPG
Trigger: GCCAGGTGCAAAGCACAGGAGACCGCACCCAAACTCAACACCGCAGCTGGGTGGGCCAAACAGCAATCCTACCAGCTTGCAATCATTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGGCGGGCACGCTGCTCTaGCACCGGGCACCGCGAACC +
Preference number: 5 (lower is better)
Translates to: YYEVILRIQGGNGCEERVAGTLL*HRAPRT
Trigger: GGTTCGCGGTGCCCGGTGCAAGAGCAGCGTGCCCGC...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR CAA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTGAATGGGGACATAGGTaGGGAGCCACTGAGTGGACA +
Preference number: 5 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFEWGHR*GATEWT
Trigger: TGTCCACTCAGTGGCTCCCAACCTATGTCCCCATTC...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGGAATTTTTGGGGAATTaGTGGCAGGAGGGAGGAATG +
Preference number: 5 (lower is better)
Translates to: WRLQNQVKAREASLLEVEEFLGN*WQEGGM
Trigger: CATTCCTCCCTCCTGCCACAAATTCCCCAAAAATTC...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGAGCTGGACCCCCTTTTaGAGCGGTGAGGAGAGCAAT +
Preference number: 5 (lower is better)
Translates to: VKAREASLLEVETKSLKLSWTPF*SGEESN
Trigger: ATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCT...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTTCAAACCGGAGGGAGTaGCTCATTCCTGGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: DMEASEPGEGSGGESAGGSNRRE*LIPGGV
Trigger: AACACCTCCAGGAATGAGCAACTCCCTCCGGTTTGA...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTTGCTGGAGCTGGGATTaGAACCCAGCTAGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFCWSWD*NPASSV
Trigger: GACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTAGGATCTACCTACTGTaGAGGCTCCTGGAGATCCTC +
Preference number: 5 (lower is better)
Translates to: DMEASEPGEGSGGESAGGRIYLL*RLLEIL
Trigger: GAGGATCTCCAGGAGCCTCAACAGTAGGTAGATCCT...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGTACAAAGCTGCAGCCTaGATAAATGACGGGCCATGG +
Preference number: 5 (lower is better)
Translates to: IWRLQNQVKAREASLLEVYKAAA*INDGPW
Trigger: CCATGGCCCGTCATTTATCAAGGCTGCAGCTTTGTA...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR CAA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACTACAAAGCTGCAGCCTaGATAAATGACGGGCCATGG +
Preference number: 5 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDYKAAA*INDGPW
Trigger: CCATGGCCCGTCATTTATCAAGGCTGCAGCTTTGTA...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR CAA 90 bp TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGTTCGATCCTAGTTGGTaGTACACACCCATACTAGGT +
Preference number: 5 (lower is better)
Translates to: WRLQNQVKAREASLLEVEFDPSW*YTPILG
Trigger: ACCTAGTATGGGTGTGTACAACCAACTAGGATCGAA...CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000475323.5
CDS-3UTR CAA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGTGGAGCAGAACCTTGTaGCTTCAGTACTGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: IWRLQNQVKAREASLLEVWSRTL*LQYCPF
Trigger: GAAAGGGCAGTACTGAAGCAACAAGGTTCTGCTCCA...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGTGGAGCAGAACCTTGTaGCTTCAGTACTGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQWSRTL*LQYCPF
Trigger: GAAAGGGCAGTACTGAAGCAACAAGGTTCTGCTCCA...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTTCAAACCGGAGGGAGTaGCTCATTCCTGGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: GEGSGGESAGGGDKVSETSNRRE*LIPGGV
Trigger: AACACCTCCAGGAATGAGCAACTCCCTCCGGTTTGA...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGTGCTGGAGCTGGGATTaGAACCCAGCTAGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: WDLNPASSVHATRVGPALCWSWD*NPASSV
Trigger: GACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCATCCCAAGCCAGGAATTaGGGGAAAGGGGTTGGAGAC +
Preference number: 5 (lower is better)
Translates to: WSWDLNPASSVHATRVGPSQARN*GKGVGD
Trigger: GTCTCCAACCCCTTTCCCCAAATTCCTGGCTTGGGA...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATCCCTGGCTCCCTCTGTaGATCCCGGCCCCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNPWLPL*IPAPAP
Trigger: TGGAGCAGGGGCCGGGATCAACAGAGGGAGCCAGGG...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp TGCTGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCTCTTCCTGAGGACTTaGTGTTGCCCAGGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: CWSWDLNPASSVHATRVGLFLRT*CCPGWS
Trigger: AGACCAGCCTGGGCAACACAAAGTCCTCAGGAAGAG...CCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTATACTGCTGGAGCCGTaGCAGAGGCAGAGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFILLEP*QRQREQ
Trigger: CTGCTCCCTCTGCCTCTGCAACGGCTCCAGCAGTAT...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp CAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGGGGGAGTTTAGGGGACAGCAGATGATCTGGAGTAGCTaGGTCCAGGCAAACAGAAAG +
Preference number: 5 (lower is better)
Translates to: QVGLAEVCAGSGEFRGQQMIWSS*VQANRK
Trigger: CTTTCTGTTTGCCTGGACCAAGCTACTCCAGATCAT...CTGCTGTCCCCTAAACTCCCCCGACCCAGCACAGACTTCTGCTAAACCCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAATTTTTGGGGAATTaGTGGCAGGAGGGAGGAATG +
Preference number: 5 (lower is better)
Translates to: IWRLQNQVKAREASLLEVEFLGN*WQEGGM
Trigger: CATTCCTCCCTCCTGCCACAAATTCCCCAAAAATTC...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCATCAAACCGGAGGGAGTaGCTCATTCCTGGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: WSWDLNPASSVHATRVGPSNRRE*LIPGGV
Trigger: AACACCTCCAGGAATGAGCAACTCCCTCCGGTTTGA...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTGTTTGTGACATCGTTTaGGTCGCCAGGAAGGGATTG +
Preference number: 5 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFVCDIV*VARKGL
Trigger: CAATCCCTTCCTGGCGACCAAAACGATGTCACAAAC...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp GTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGATTTGGGGAAAGGGGTaGGAGACCATACAAGGCAGA +
Preference number: 5 (lower is better)
Translates to: VKAREASLLEVETKSLKLIWGKG*ETIQGR
Trigger: TCTGCCTTGTATGGTCTCCAACCCCTTTCCCCAAAT...CAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGTGAGCTGTGAGACTTaGGCTCCATCTCTGCAAAAG +
Preference number: 5 (lower is better)
Translates to: GEGSGGESAGGGDKVSETVSCET*APSLQK
Trigger: CTTTTGCAGAGATGGAGCCAAAGTCTCACAGCTCAC...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CCA 90 bp TTTTCTTTAGCTGCTCCTGCAGGGTGGTCTGGGACCTCTCTGAGTTaGCAGCAAATTGGTTATAGAGCTCCAAGTGGCGGCAGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: FSLAAPAGWSGTSLS*QQIGYRAPSGGRSP
Trigger: AGGGCTTCTGCCGCCACTTGGAGCTCTATAACCAATTTGCTGCCAACTCAGAGAGGTCCCAGACCACCCTGCAGGAGCAGCTAAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378387.4
ENST00000468876.1
ENST00000475323.5
ENST00000490638.5
ENST00000490970.5
CDS CCA 90 bp GAGCGGTTCATCCTTTTCATTTATACAGGGGATGACCAGAGTCATTaGCGCTATGGAGGTGAGACACCCACCCGCTGCACAGACCCAATC +
Preference number: 5 (lower is better)
Translates to: ERFILFIYTGDDQSH*RYGGETPTRCTDPI
Trigger: GATTGGGTCTGTGCAGCGGGTGGGTGTCTCACCTCCATAGCGCCAATGACTCTGGTCATCCCCTGTATAAATGAAAAGGATGAACCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp TGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCATGGAGCAGAACCTTGTaGCTTCAGTACTGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: WSWDLNPASSVHATRVGPWSRTL*LQYCPF
Trigger: GAAAGGGCAGTACTGAAGCAACAAGGTTCTGCTCCA...TGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp GGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTATTGGGGCTCTAAGCTaGAGCGGTTCATCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: GEGSGGESAGGGDKVSETIGALS*SGSSFS
Trigger: TGAAAAGGATGAACCGCTCAAGCTTAGAGCCCCAAT...AGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGGGTGTACTCACTCATTaGGGACTCAGGACTGAAGTG +
Preference number: 5 (lower is better)
Translates to: WDLNPASSVHATRVGPALGVLTH*GLRTEV
Trigger: CACTTCAGTCCTGAGTCCCAAATGAGTGAGTACACC...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp TGCTGGAGCTGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGGAGAAACGTGGCTTCTaGACTCCCAAGCCAGGAATT +
Preference number: 5 (lower is better)
Translates to: CWSWDLNPASSVHATRVGEKRGF*TPKPGI
Trigger: AATTCCTGGCTTGGGAGTCAAGAAGCCACGTTTCTC...CCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCAGCTCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp CCGGAGGGAGTTGCTCATTCCTGGAGGTGTTTCAGCAAACTGACCATGTGTGGGGTACTGTTTGAGGGTTaGGCAGACTCCCAGCATGAT +
Preference number: 5 (lower is better)
Translates to: PEGVAHSWRCFSKLTMCGVLFEG*ADSQHD
Trigger: ATCATGCTGGGAGTCTGCCAAACCCTCAAACAGTAC...CCCACACATGGTCAGTTTGCTGAAACACCTCCAGGAATGAGCAACTCCCTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp TGGGATTTGAACCCAGCTAGCAGTGTCCATGCTACAAGAGTGGGGCCAGCCTTGCCCAAAAAGTACTGTTaGAGGGTTTGGCAGACTCCC +
Preference number: 5 (lower is better)
Translates to: WDLNPASSVHATRVGPALPKKYC*RVWQTP
Trigger: GGGAGTCTGCCAAACCCTCAAACAGTACTTTTTGGG...CAAGGCTGGCCCCACTCTTGTAGCATGGACACTGCTAGCTGGGTTCAAATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp CTGCTGATAGCCCAAGTCAGACTGTGGTACCAGCGTGACAGCTCCTCCTGGTCTTTCGATCCTAGTTGGTaGTACACACCCATACTAGGT +
Preference number: 5 (lower is better)
Translates to: LLIAQVRLWYQRDSSSWSFDPSW*YTPILG
Trigger: ACCTAGTATGGGTGTGTACAACCAACTAGGATCGAA...AGACCAGGAGGAGCTGTCACGCTGGTACCACAGTCTGACTTGGGCTATCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR CAA 90 bp TATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAGCGTGTGCAGGAGGATTCCCCCTaGGGAGGAGGCTCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: YYEVILRIQGGNGCEERVQEDSP*GGGSSG
Trigger: CCCAGAAGAGCCTCCTCCCAAGGGGGAATCCTCCTG...CACACGCTCTTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp GATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGACAAATTTTGGCTTaGTGCATGAACTGTCTAACA +
Preference number: 5 (lower is better)
Translates to: DMEASEPGEGSGGESAGGGQILA*CMNCLT
Trigger: TGTTAGACAGTTCATGCACAAAGCCAAAATTTGTCC...ACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CAA 90 bp TCCCTTATCCCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACTATTATGAGGTTATTTaGAGGATCCAGGGAGGTAAC +
Preference number: 5 (lower is better)
Translates to: SLIPRATAGPVDTTAGPDYYEVI*RIQGGN
Trigger: GTTACCTCCCTGGATCCTCAAAATAACCTCATAATA...GTCTGGGCCAGCTGTTGTGTCAACTGGGCCAGCTGTTGCTCTGGGGATAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGTCCATCCCCAGAGGTaGCCCCGGATGCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEVHPQR*PRMQED
Trigger: ATCCTCCTGCATCCGGGGCAACCTCTGGGGATGGAC...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS TCA 90 bp AAGGCATTTGTTACCCGTAATGCTCCTGTAAGGCATCTGCGTTTGTaGCATCGTTTTGGTCGCCAGGAAGGGATTGGGGCTCTAAGCTTG +
Preference number: 5 (lower is better)
Translates to: KAFVTRNAPVRHLRL*HRFGRQEGIGALSL
Trigger: CAAGCTTAGAGCCCCAATCCCTTCCTGGCGACCAAAACGATGTCACAAACGCAGATGCCTTACAGGAGCATTACGGGTAACAAATGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CCA 90 bp AGTATGGACTCTCTGGGCAGTCTCACTTATCAGTCGGGCAGCCCCTaGAATAACATCTCCCACCTTACTCCCCATACAACTTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: SMDSLGSLTYQSGSP*NNISHLTPHTTLTL
Trigger: CAAAGTCAAAGTTGTATGGGGAGTAAGGTGGGAGATGTTATTCCAGGGGCTGCCCGACTGATAAGTGAGACTGCCCAGAGAGTCCATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS-3UTR CAA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAAGTGGAGGCCGAGGCTaGGCCATGAGGAGCACATCA +
Preference number: 5 (lower is better)
Translates to: AFQYYEVILRIQGGNGCESGGRG*AMRSTS
Trigger: TGATGTGCTCCTCATGGCCAAGCCTCGGCCTCCACT...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGCATAAAGGACAAATTTaGGCTTTGTGCATGAACTGT +
Preference number: 5 (lower is better)
Translates to: IWRLQNQVKAREASLLEVHKGQI*ALCMNC
Trigger: ACAGTTCATGCACAAAGCCAAAATTTGTCCTTTATG...CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CAA 90 bp AGTAGTCACTTGCTCGAGGTCACCCAGCGCTGGCAACTGCTGGAGCTGGGATTTTATTATGAGGTTATTTaGAGGATCCAGGGAGGTAAC +
Preference number: 5 (lower is better)
Translates to: SSHLLEVTQRWQLLELGFYYEVI*RIQGGN
Trigger: GTTACCTCCCTGGATCCTCAAAATAACCTCATAATA...AAATCCCAGCTCCAGCAGTTGCCAGCGCTGGGTGACCTCGAGCAAGTGACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS TCA 90 bp GAAAGAGGTTATTCTGGAAGGGACCAGGGTCAGGGTCTGACTTCTTaGAGAAAAGGCAGAGCAGTAGGGACACTGTATACATGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: ERGYSGRDQGQGLTS*RKGRAVGTLYTCQW
Trigger: CCACTGACATGTATACAGTGTCCCTACTGCTCTGCCTTTTCTTCAAGAAGTCAGACCCTGACCCTGGTCCCTTCCAGAATAACCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS CCA 90 bp AAGGCATCTGCGTTTGTGACATCGTTTTGGTCGCCAGGAAGGGATTaGGGCTCTAAGCTTGAGCGGTTCATCCTTTTCATTTATACAGGG +
Preference number: 5 (lower is better)
Translates to: KASAFVTSFWSPGRD*GSKLERFILFIYTG
Trigger: CCCTGTATAAATGAAAAGGATGAACCGCTCAAGCTTAGAGCCCCAATCCCTTCCTGGCGACCAAAACGATGTCACAAACGCAGATGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS-3UTR CAA 90 bp TTGGAAGGCTCCAGTAAGCACTATGGAAAGAAGATACATAAAGGACAAATTTTGCAGCCCCAGCTGTTCTaGGTAGCGCCGCTCGGTCTC +
Preference number: 5 (lower is better)
Translates to: LEGSSKHYGKKIHKGQILQPQLF*VAPLGL
Trigger: GAGACCGAGCGGCGCTACCAAGAACAGCTGGGGCTG...CAAAATTTGTCCTTTATGTATCTTCTTTCCATAGTGCTTACTGGAGCCTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CAA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTATGATCTGGAGTAGCTaGGTCCAGGCAAACAGAAAG +
Preference number: 5 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFMIWSS*VQANRK
Trigger: CTTTCTGTTTGCCTGGACCAAGCTACTCCAGATCAT...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp CCCAGCTGGACCCCCTTTTTGAGCGGTGAGGAGAGCAATGATTCTGTGAATTTTGAATTTTTGGGGAATTaGTGGCAGGAGGGAGGAATG +
Preference number: 5 (lower is better)
Translates to: PSWTPFLSGEESNDSVNFEFLGN*WQEGGM
Trigger: CATTCCTCCCTCCTGCCACAAATTCCCCAAAAATTC...AAAATTCACAGAATCATTGCTCTCCTCACCGCTCAAAAAGGGGGTCCAGCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp ATCCTGAGTTCTGGAATCTATAAGATTCCTCTAGTTTTTCTGGCTGCTGATAGCGTGAGGAGTAGTCACTaGCTCGAGGTCACCCAGCGC +
Preference number: 5 (lower is better)
Translates to: ILSSGIYKIPLVFLAADSVRSSH*LEVTQR
Trigger: GCGCTGGGTGACCTCGAGCAAGTGACTACTCCTCAC...GCTATCAGCAGCCAGAAAAACTAGAGGAATCTTATAGATTCCAGAACTCAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475323.5
CDS-3UTR CAA 90 bp GCCTTCCAATATTATGAGGTTATTTTGAGGATCCAGGGAGGTAACGGATGTGAAGAATGGGGACATAGGTaGGGAGCCACTGAGTGGACA +
Preference number: 5 (lower is better)
Translates to: AFQYYEVILRIQGGNGCEEWGHR*GATEWT
Trigger: TGTCCACTCAGTGGCTCCCAACCTATGTCCCCATTC...TTCACATCCGTTACCTCCCTGGATCCTCAAAATAACCTCATAATATTGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475323.5
ENST00000490638.5
CDS-3UTR CAA 90 bp TTGGAAGGCTCCAGTAAGCACTATGGAAAGAAGATACATAAAGGACAAATTTTGGGTCGCAGGGTCCCCTaGGCTTTCAGGATCCCCAAA +
Preference number: 5 (lower is better)
Translates to: LEGSSKHYGKKIHKGQILGRRVP*AFRIPK
Trigger: TTTGGGGATCCTGAAAGCCAAGGGGACCCTGCGACC...CAAAATTTGTCCTTTATGTATCTTCTTTCCATAGTGCTTACTGGAGCCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378387.4
CDS-3UTR CAA 90 bp TTCCTTTGTACTCTTGGCTGTGACCTATCCCTGAGGTATCCTGAGTTCTGGAATATGATCTGGAGTAGCTaGGTCCAGGCAAACAGAAAG +
Preference number: 5 (lower is better)
Translates to: FLCTLGCDLSLRYPEFWNMIWSS*VQANRK
Trigger: CTTTCTGTTTGCCTGGACCAAGCTACTCCAGATCAT...ATTCCAGAACTCAGGATACCTCAGGGATAGGTCACAGCCAAGAGTACAAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS GCA 72 bp GCGGTGCAGGCGCGTTTCCGCTCCCAGCGGGCACGCTaGTCTTGCACCGGGCACCGCGAACCGGGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: AVQARFRSQRAR*SCTGHREPGQE
Trigger: CTCCTGCCCCGGTTCGCGGTGCCCGGTGCAAGAGCAGCGTGCCCGCTGGGAGCGGAAACGCGCCTGCACCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490970.5
CDS CAA 90 bp CCGGGCGGTGCAGGCGCGTTTCCGCTCCCAGCGGGCACGCTGCTCTaGCACCGGGCACCGCGAACCGGGGCAGGAGAGCTCCATGCCCTG +
Preference number: 6 (lower is better)
Translates to: PGGAGAFPLPAGTLL*HRAPRTGAGELHAL
Trigger: CAGGGCATGGAGCTCTCCTGCCCCGGTTCGCGGTGCCCGGTGCAAGAGCAGCGTGCCCGCTGGGAGCGGAAACGCGCCTGCACCGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490970.5
CDS GCA 72 bp CAGGCGCGTTTCCGCTCCCAGCGGGCACGCTGCTCTTaGACCGGGCACCGCGAACCGGGGCAGGAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: QARFRSQRARCS*TGHREPGQESS
Trigger: GGAGCTCTCCTGCCCCGGTTCGCGGTGCCCGGTGCAAGAGCAGCGTGCCCGCTGGGAGCGGAAACGCGCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490970.5
CDS GCA 72 bp GGTAGCGCCGCTCGGTCTCTAGCAGCTCCCGGGCGGTaGAGGCGCGTTTCCGCTCCCAGCGGGCACGCTGCT +
Preference number: 6 (lower is better)
Translates to: GSAARSLAAPGR*RRVSAPSGHAA
Trigger: AGCAGCGTGCCCGCTGGGAGCGGAAACGCGCCTGCACCGCCCGGGAGCTGCTAGAGACCGAGCGGCGCTACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490970.5
CDS CAA 72 bp GCAGGCGCGTTTCCGCTCCCAGCGGGCACGCTGCTCTaGCACCGGGCACCGCGAACCGGGGCAGGAGAGCTC +
Preference number: 6 (lower is better)
Translates to: AGAFPLPAGTLL*HRAPRTGAGEL
Trigger: GAGCTCTCCTGCCCCGGTTCGCGGTGCCCGGTGCAAGAGCAGCGTGCCCGCTGGGAGCGGAAACGCGCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490970.5
CDS TCA 72 bp GAACCCAGCTCTGTGGATCTCCCCTACAGCCGTCCCTaGACACTGGTCCCGGGCGTCCCACCCGCCGCCCAC +
Preference number: 6 (lower is better)
Translates to: EPSSVDLPYSRP*TLVPGVPPAAH
Trigger: GTGGGCGGCGGGTGGGACGCCCGGGACCAGTGTTCAGGGACGGCTGTAGGGGAGATCCACAGAGCTGGGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS TCA 72 bp CCAGGTAGGGAAGCAGCTCCTGGCTGGCGCCGTAGATaGGCTCCCAGGAGCCAAACAGGGCCTGGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: PGREAAPGWRRR*APRSQTGPGAQ
Trigger: CTGAGCGCCAGGCCCTGTTTGGCTCCTGGGAGCTCATCTACGGCGCCAGCCAGGAGCTGCTTCCCTACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378387.4
ENST00000468876.1
ENST00000475323.5
ENST00000490638.5
CDS GCA 72 bp ACTGGGCCATGGGGTAGAGGGCCTTGCAGGCAAAGGTaGCACTCCGCAGCAGGTGCAGTGGAGGCCGAGGCT +
Preference number: 6 (lower is better)
Translates to: TGPWGRGPCRQR*HSAAGAVEAEA
Trigger: AGCCTCGGCCTCCACTGCACCTGCTGCGGAGTGGCACCTTTGCCTGCAAGGCCCTCTACCCCATGGCCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378387.4
ENST00000488918.2
ENST00000490638.5
ENST00000490970.5
CDS CCA 72 bp CGTAGGAACCAGCGCCCTGAGGTCAGCCCCTTTGCCTaGCGTCCACTGAGCAGAGCCTGGACACGCCGAAGG +
Preference number: 6 (lower is better)
Translates to: RRNQRPEVSPFA*RPLSRAWTRRR
Trigger: CCTTCGGCGTGTCCAGGCTCTGCTCAGTGGACGCCAGGCAAAGGGGCTGACCTCAGGGCGCTGGTTCCTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS GCA 72 bp TCCCGGCCCCTGCTCCAGGCCTCACTGTGCAACTGCTaGTGTCACTGCTGCTTCTGGTGCCTGTCCATCCCC +
Preference number: 6 (lower is better)
Translates to: SRPLLQASLCNC*CHCCFWCLSIP
Trigger: GGGGATGGACAGGCACCAGAAGCAGCAGTGACAGCAGCAGTTGCACAGTGAGGCCTGGAGCAGGGGCCGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CCA 72 bp GAGCTCCCAGGAGCCAAACAGGGCCTGGCGCTCAGGTaGTCGCAGGGTCCCCTTGGCTTTCAGGATCCCCAA +
Preference number: 6 (lower is better)
Translates to: ELPGAKQGLALR*SQGPLGFQDPQ
Trigger: TTGGGGATCCTGAAAGCCAAGGGGACCCTGCGACCACCTGAGCGCCAGGCCCTGTTTGGCTCCTGGGAGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000475323.5
ENST00000490638.5
CDS CCA 72 bp GTGAAGAGGAAGAACATGCGGGGCCGAGGCTCCCCATaGGGAGGCACCACTAACAGCCAGCCCTGGCGTAGG +
Preference number: 6 (lower is better)
Translates to: VKRKNMRGRGSP*GGTTNSQPWRR
Trigger: CCTACGCCAGGGCTGGCTGTTAGTGGTGCCTCCCCATGGGGAGCCTCGGCCCCGCATGTTCTTCCTCTTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378387.4
ENST00000490638.5
ENST00000490970.5
CDS GCA 72 bp CACTGCTGCTTCTGGTGCCTGTCCATCCCCAGAGGTTaGCCCGGATGCAGGAGGATTCCCCCTTGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: HCCFWCLSIPRG*PGCRRIPPWEE
Trigger: CTCCTCCCAAGGGGGAATCCTCCTGCATCCGGGGCAACCTCTGGGGATGGACAGGCACCAGAAGCAGCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS GCA 72 bp TCGTTTCCAATGCACGTACAGCCCGTACACACCGTGTaGTGGGACACCCCACAGTCAGCCGCATGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: SFPMHVQPVHTV*WDTPQSAAWLP
Trigger: GGGGAGCCATGCGGCTGACTGTGGGGTGTCCCAGCACACGGTGTGTACGGGCTGTACGTGCATTGGAAACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CAA 72 bp GATTGCTGTTTGGCCCACCCAGCTGCGGTGTTGAGTTaGGGTGCGGTCTCCTGTGCTTTGCACCTGGCCCGC +
Preference number: 6 (lower is better)
Translates to: DCCLAHPAAVLS*GAVSCALHLAR
Trigger: GCGGGCCAGGTGCAAAGCACAGGAGACCGCACCCAAACTCAACACCGCAGCTGGGTGGGCCAAACAGCAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS TCA 72 bp GAGACTTTGGCTCCATCTCTGCAAAAGGGCGCTCTGTaGGTCAGCCTGCTCCCCTCCAGGCTTGCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: ETLAPSLQKGAL*VSLLPSRLAPP
Trigger: GGGAGGAGCAAGCCTGGAGGGGAGCAGGCTGACTCACAGAGCGCCCTTTTGCAGAGATGGAGCCAAAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS GCA 72 bp CTGTTTGGCCCACCCAGCTGCGGTGTTGAGTTTGGGTaGGGTCTCCTGTGCTTTGCACCTGGCCCGCTTAAG +
Preference number: 6 (lower is better)
Translates to: LFGPPSCGVEFG*GLLCFAPGPLK
Trigger: CTTAAGCGGGCCAGGTGCAAAGCACAGGAGACCGCACCCAAACTCAACACCGCAGCTGGGTGGGCCAAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CCA 72 bp TTTCCAATGCACGTACAGCCCGTACACACCGTGTGCTaGGACACCCCACAGTCAGCCGCATGGCTCCCCTGT +
Preference number: 6 (lower is better)
Translates to: FPMHVQPVHTVC*DTPQSAAWLPC
Trigger: ACAGGGGAGCCATGCGGCTGACTGTGGGGTGTCCCAGCACACGGTGTGTACGGGCTGTACGTGCATTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CAA 90 bp AAATTGGTTATAGAGCTCCAAGTGGCGGCAGAAGCCCTCCAGCCCTaGGCCCCAGCATCCTCCTTCCAGGTAGGGAAGCAGCTCCCGTGG +
Preference number: 6 (lower is better)
Translates to: KLVIELQVAAEALQP*APASSFQVGKQLPW
Trigger: CCACGGGAGCTGCTTCCCTACCTGGAAGGAGGATGCTGGGGCCAAGGGCTGGAGGGCTTCTGCCGCCACTTGGAGCTCTATAACCAATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490970.5
CDS TCA 72 bp GGTAGGATTGCTGTTTGGCCCACCCAGCTGCGGTGTTaGGTTTGGGTGCGGTCTCCTGTGCTTTGCACCTGG +
Preference number: 6 (lower is better)
Translates to: GRIAVWPTQLRC*VWVRSPVLCTW
Trigger: CCAGGTGCAAAGCACAGGAGACCGCACCCAAACTCAACACCGCAGCTGGGTGGGCCAAACAGCAATCCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CCA 72 bp GTCAGCCCCTTTGCCTGGCGTCCACTGAGCAGAGCCTaGACACGCCGAAGGTGCTGGTCATTCTTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: VSPFAWRPLSRA*TRRRCWSFFCF
Trigger: GAAACAGAAGAATGACCAGCACCTTCGGCGTGTCCAGGCTCTGCTCAGTGGACGCCAGGCAAAGGGGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378387.4
ENST00000490638.5
CDS CAA 90 bp GCCCACCCAGCTGCGGTGTTGAGTTTGGGTGCGGTCTCCTGTGCTTaGCACCTGGCCCGCTTAAGGCATTTGTTACCCGTAATGCTCCTG +
Preference number: 6 (lower is better)
Translates to: AHPAAVLSLGAVSCA*HLARLRHLLPVMLL
Trigger: CAGGAGCATTACGGGTAACAAATGCCTTAAGCGGGCCAGGTGCAAAGCACAGGAGACCGCACCCAAACTCAACACCGCAGCTGGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS TCA 72 bp TCCAGCCTGCGTTGCCGAGGAGCAAGAACCTACGTGTaGGCTGTTGATGGTCAGGGCTGTTGGGACCTGTGT +
Preference number: 6 (lower is better)
Translates to: SSLRCRGARTYV*AVDGQGCWDLC
Trigger: ACACAGGTCCCAACAGCCCTGACCATCAACAGCTCACACGTAGGTTCTTGCTCCTCGGCAACGCAGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS GCA 72 bp AGTCATTGGCGCTATGGAGGTGAGACACCCACCCGCTaGACAGACCCAATCTGGGAACCCAGCTCTGTGGAT +
Preference number: 6 (lower is better)
Translates to: SHWRYGGETPTR*TDPIWEPSSVD
Trigger: ATCCACAGAGCTGGGTTCCCAGATTGGGTCTGTGCAGCGGGTGGGTGTCTCACCTCCATAGCGCCAATGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS GCA 72 bp CCCAGCTGCGGTGTTGAGTTTGGGTGCGGTCTCCTGTaGTTTGCACCTGGCCCGCTTAAGGCATTTGTTACC +
Preference number: 6 (lower is better)
Translates to: PSCGVEFGCGLL*FAPGPLKAFVT
Trigger: GGTAACAAATGCCTTAAGCGGGCCAGGTGCAAAGCACAGGAGACCGCACCCAAACTCAACACCGCAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CAA 90 bp CCTCCAGCCTGCGTTGCCGAGGAGCAAGAACCTACGTGTGAGCTGTaGATGGTCAGGGCTGTTGGGACCTGTGTTTTCAGCCAAAGCTAC +
Preference number: 6 (lower is better)
Translates to: PPACVAEEQEPTCEL*MVRAVGTCVFSQSY
Trigger: GTAGCTTTGGCTGAAAACACAGGTCCCAACAGCCCTGACCATCAACAGCTCACACGTAGGTTCTTGCTCCTCGGCAACGCAGGCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS TCA 72 bp GCGTTGCCGAGGAGCAAGAACCTACGTGTGAGCTGTTaGTGGTCAGGGCTGTTGGGACCTGTGTTTTCAGCC +
Preference number: 6 (lower is better)
Translates to: ALPRSKNLRVSC*WSGLLGPVFSA
Trigger: GGCTGAAAACACAGGTCCCAACAGCCCTGACCATCAACAGCTCACACGTAGGTTCTTGCTCCTCGGCAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS GCA 72 bp TGCAAGCTGGTAGGATTGCTGTTTGGCCCACCCAGCTaGGGTGTTGAGTTTGGGTGCGGTCTCCTGTGCTTT +
Preference number: 6 (lower is better)
Translates to: CKLVGLLFGPPS*GVEFGCGLLCF
Trigger: AAAGCACAGGAGACCGCACCCAAACTCAACACCGCAGCTGGGTGGGCCAAACAGCAATCCTACCAGCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CAA 72 bp GCTGCGGTGTTGAGTTTGGGTGCGGTCTCCTGTGCTTaGCACCTGGCCCGCTTAAGGCATTTGTTACCCGTA +
Preference number: 6 (lower is better)
Translates to: AAVLSLGAVSCA*HLARLRHLLPV
Trigger: TACGGGTAACAAATGCCTTAAGCGGGCCAGGTGCAAAGCACAGGAGACCGCACCCAAACTCAACACCGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CAA 72 bp TGCGTTGCCGAGGAGCAAGAACCTACGTGTGAGCTGTaGATGGTCAGGGCTGTTGGGACCTGTGTTTTCAGC +
Preference number: 6 (lower is better)
Translates to: CVAEEQEPTCEL*MVRAVGTCVFS
Trigger: GCTGAAAACACAGGTCCCAACAGCCCTGACCATCAACAGCTCACACGTAGGTTCTTGCTCCTCGGCAACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS CCA 72 bp AAAGGGTGCAAAAGGAGAGAGGTGAGCTGGATGAGATaGGAGAGAAGGGGGAGGCTGGAGAAGAGAAAGGGA +
Preference number: 6 (lower is better)
Translates to: KGCKRREVSWMR*ERRGRLEKRKG
Trigger: TCCCTTTCTCTTCTCCAGCCTCCCCCTTCTCTCCCATCTCATCCAGCTCACCTCTCTCCTTTTGCACCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CAA 90 bp ACAGCAGGTAGAGAAACGTGGCTTCTTGACTCCCAAGCCAGGAATTaGGGGAAAGGGGTTGGAGACCATACAAGGCAGAGGGATGAGTGG +
Preference number: 6 (lower is better)
Translates to: TAGRETWLLDSQARN*GKGVGDHTRQRDEW
Trigger: CCACTCATCCCTCTGCCTTGTATGGTCTCCAACCCCTTTCCCCAAATTCCTGGCTTGGGAGTCAAGAAGCCACGTTTCTCTACCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS TCA 72 bp GTTACCCGTAATGCTCCTGTAAGGCATCTGCGTTTGTaGCATCGTTTTGGTCGCCAGGAAGGGATTGGGGCT +
Preference number: 6 (lower is better)
Translates to: VTRNAPVRHLRL*HRFGRQEGIGA
Trigger: AGCCCCAATCCCTTCCTGGCGACCAAAACGATGTCACAAACGCAGATGCCTTACAGGAGCATTACGGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CCA 72 bp TCTCTGGGCAGTCTCACTTATCAGTCGGGCAGCCCCTaGAATAACATCTCCCACCTTACTCCCCATACAACT +
Preference number: 6 (lower is better)
Translates to: SLGSLTYQSGSP*NNISHLTPHTT
Trigger: AGTTGTATGGGGAGTAAGGTGGGAGATGTTATTCCAGGGGCTGCCCGACTGATAAGTGAGACTGCCCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS CAA 72 bp GAAGAAGGGACACAGCAGGTAGAGAAACGTGGCTTCTaGACTCCCAAGCCAGGAATTTGGGGAAAGGGGTTG +
Preference number: 6 (lower is better)
Translates to: EEGTQQVEKRGF*TPKPGIWGKGL
Trigger: CAACCCCTTTCCCCAAATTCCTGGCTTGGGAGTCAAGAAGCCACGTTTCTCTACCTGCTGTGTCCCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CCA 72 bp ATCCTTTTCATTTATACAGGGGATGACCAGAGTCATTaGCGCTATGGAGGTGAGACACCCACCCGCTGCACA +
Preference number: 6 (lower is better)
Translates to: ILFIYTGDDQSH*RYGGETPTRCT
Trigger: TGTGCAGCGGGTGGGTGTCTCACCTCCATAGCGCCAATGACTCTGGTCATCCCCTGTATAAATGAAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CCA 72 bp GACCTAGGAAGAAGGGACACAGCAGGTAGAGAAACGTaGCTTCTTGACTCCCAAGCCAGGAATTTGGGGAAA +
Preference number: 6 (lower is better)
Translates to: DLGRRDTAGRET*LLDSQARNLGK
Trigger: TTTCCCCAAATTCCTGGCTTGGGAGTCAAGAAGCCACGTTTCTCTACCTGCTGTGTCCCTTCTTCCTAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CAA 90 bp GGCAGCCCCTGGAATAACATCTCCCACCTTACTCCCCATACAACTTaGACTTTGGGTGCCATGGTTGTGAAAGAGGTTATTCTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: GSPWNNISHLTPHTT*TLGAMVVKEVILEG
Trigger: CCCTTCCAGAATAACCTCTTTCACAACCATGGCACCCAAAGTCAAAGTTGTATGGGGAGTAAGGTGGGAGATGTTATTCCAGGGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS CCA 72 bp GCGTTTGTGACATCGTTTTGGTCGCCAGGAAGGGATTaGGGCTCTAAGCTTGAGCGGTTCATCCTTTTCATT +
Preference number: 6 (lower is better)
Translates to: AFVTSFWSPGRD*GSKLERFILFI
Trigger: AATGAAAAGGATGAACCGCTCAAGCTTAGAGCCCCAATCCCTTCCTGGCGACCAAAACGATGTCACAAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490638.5
CDS CAA 90 bp CCCTGGAATAACATCTCCCACCTTACTCCCCATACAACTTTGACTTaGGGTGCCATGGTTGTGAAAGAGGTTATTCTGGAAGGGACCAGG +
Preference number: 6 (lower is better)
Translates to: PWNNISHLTPHTTLT*GAMVVKEVILEGTR
Trigger: CCTGGTCCCTTCCAGAATAACCTCTTTCACAACCATGGCACCCAAAGTCAAAGTTGTATGGGGAGTAAGGTGGGAGATGTTATTCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS GCA 72 bp CTCCCACCTTACTCCCCATACAACTTTGACTTTGGGTaGCATGGTTGTGAAAGAGGTTATTCTGGAAGGGAC +
Preference number: 6 (lower is better)
Translates to: LPPYSPYNFDFG*HGCERGYSGRD
Trigger: GTCCCTTCCAGAATAACCTCTTTCACAACCATGGCACCCAAAGTCAAAGTTGTATGGGGAGTAAGGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS CAA 90 bp ACACTGTATACATGTCAGTGGAAGATAGGGTCATACCAGACATTGTaGGAGGTCAGAATCAGAAAGGAATACAGGAGAGGAAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: TLYTCQWKIGSYQTL*EVRIRKEYRRGSLQ
Trigger: CTGGAGGCTTCCTCTCCTGTATTCCTTTCTGATTCTGACCTCCAACAATGTCTGGTATGACCCTATCTTCCACTGACATGTATACAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS CAA 72 bp ACATGTCAGTGGAAGATAGGGTCATACCAGACATTGTaGGAGGTCAGAATCAGAAAGGAATACAGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: TCQWKIGSYQTL*EVRIRKEYRRG
Trigger: TCCTCTCCTGTATTCCTTTCTGATTCTGACCTCCAACAATGTCTGGTATGACCCTATCTTCCACTGACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS CAA 72 bp AACATCTCCCACCTTACTCCCCATACAACTTTGACTTaGGGTGCCATGGTTGTGAAAGAGGTTATTCTGGAA +
Preference number: 6 (lower is better)
Translates to: NISHLTPHTTLT*GAMVVKEVILE
Trigger: TTCCAGAATAACCTCTTTCACAACCATGGCACCCAAAGTCAAAGTTGTATGGGGAGTAAGGTGGGAGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS CAA 72 bp TGGAATAACATCTCCCACCTTACTCCCCATACAACTTaGACTTTGGGTGCCATGGTTGTGAAAGAGGTTATT +
Preference number: 6 (lower is better)
Translates to: WNNISHLTPHTT*TLGAMVVKEVI
Trigger: AATAACCTCTTTCACAACCATGGCACCCAAAGTCAAAGTTGTATGGGGAGTAAGGTGGGAGATGTTATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468876.1
CDS CAA 72 bp TATACATGTCAGTGGAAGATAGGGTCATACCAGACATaGTTGGAGGTCAGAATCAGAAAGGAATACAGGAGA +
Preference number: 6 (lower is better)
Translates to: YTCQWKIGSYQT*LEVRIRKEYRR
Trigger: TCTCCTGTATTCCTTTCTGATTCTGACCTCCAACAATGTCTGGTATGACCCTATCTTCCACTGACATGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468876.1