RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF37 (Homo sapiens)

Ensembl gene IDs: ENSG00000183111

Ensembl transcript IDs: ENST00000333677.7, ENST00000505810.5, ENST00000509831.1

Found 382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACCAAGCACTCTGCGAGGCCCGCCCATGTCTTCTGGCTGCCTCCTaGGTGTGCTTCACCCACCCTGGCCTGGTCTTCCCTTCCACCTCC +
Preference number: 1 (lower is better)
Translates to: HQALCEARPCLLAAS*VCFTHPGLVFPSTS
Trigger: GGAGGTGGAAGGGAAGACCAGGCCAGGGTGGGTGAAGCACACTCAGGAGGCAGCCAGAAGACATGGGCGGGCCTCGCAGAGTGCTTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 90 bp GTCCTACATCTAAGGTCCCACAGCCAATTGCATCACATCCACGGCTaGCTCCAGGACCTCAGGGGCCACCTGAAACCACTGGGGGTTCCC +
Preference number: 1 (lower is better)
Translates to: VLHLRSHSQLHHIHG*LQDLRGHLKPLGVP
Trigger: GGGAACCCCCAGTGGTTTCAGGTGGCCCCTGAGGTCCTGGAGGCAGCCGTGGATGTGATGCAATTGGCTGTGGGACCTTAGATGTAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 90 bp TCCTGGGTTACAGGAAAGAAAGCTATACTGATGAACAAGGTTTGCTaGCACAGGCATGGGCGTGGGGGAGGGCAGCATGCCGGGGGCCAC +
Preference number: 1 (lower is better)
Translates to: SWVTGKKAILMNKVC*HRHGRGGGQHAGGH
Trigger: GTGGCCCCCGGCATGCTGCCCTCCCCCACGCCCATGCCTGTGGCAGCAAACCTTGTTCATCAGTATAGCTTTCTTTCCTGTAACCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 90 bp AGATCCTGGGTTACAGGAAAGAAAGCTATACTGATGAACAAGGTTTaGTGCCACAGGCATGGGCGTGGGGGAGGGCAGCATGCCGGGGGC +
Preference number: 1 (lower is better)
Translates to: RSWVTGKKAILMNKV*CHRHGRGGGQHAGG
Trigger: GCCCCCGGCATGCTGCCCTCCCCCACGCCCATGCCTGTGGCAGCAAACCTTGTTCATCAGTATAGCTTTCTTTCCTGTAACCCAGGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 90 bp CCAGAGCAACAGCCTAGACATGACCACCCCAAGCAGGGACTGCACTaGACCCAACATTGCCCCAGCAGGTCAGTCCTCCTTGAACAGGAA +
Preference number: 1 (lower is better)
Translates to: PEQQPRHDHPKQGLH*TQHCPSRSVLLEQE
Trigger: TTCCTGTTCAAGGAGGACTGACCTGCTGGGGCAATGTTGGGTGCAGTGCAGTCCCTGCTTGGGGTGGTCATGTCTAGGCTGTTGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 90 bp TTTGCCCAGAGCAACAGCCTAGACATGACCACCCCAAGCAGGGACTaGACTGCACCCAACATTGCCCCAGCAGGTCAGTCCTCCTTGAAC +
Preference number: 1 (lower is better)
Translates to: FAQSNSLDMTTPSRD*TAPNIAPAGQSSLN
Trigger: GTTCAAGGAGGACTGACCTGCTGGGGCAATGTTGGGTGCAGTGCAGTCCCTGCTTGGGGTGGTCATGTCTAGGCTGTTGCTCTGGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 90 bp GTCACACCCACTCCCAGGACCAGTCAAGAGTCTTGGGAACCTCTCTaGTACACCGATAAATCCATGGCTTCCCCACTTGAGAGGGCTCCC +
Preference number: 1 (lower is better)
Translates to: VTPTPRTSQESWEPL*YTDKSMASPLERAP
Trigger: GGGAGCCCTCTCAAGTGGGGAAGCCATGGATTTATCGGTGTAGCAGAGAGGTTCCCAAGACTCTTGACTGGTCCTGGGAGTGGGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 90 bp CGGATGCAGGCACAGCTAAGACTGGCCATAACCTATGGAGAGTCCTaGCCAATCAGCTGTGACCTGCTGTCCAAGTGCATTGTGACCCCA +
Preference number: 1 (lower is better)
Translates to: RMQAQLRLAITYGES*PISCDLLSKCIVTP
Trigger: TGGGGTCACAATGCACTTGGACAGCAGGTCACAGCTGATTGGCCAGGACTCTCCATAGGTTATGGCCAGTCTTAGCTGTGCCTGCATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 90 bp CCAGTCAAGAGTCTTGGGAACCTCTCTGCTACACCGATAAATCCATaGCTTCCCCACTTGAGAGGGCTCCCAGTGGGTCACTGCCCAAGA +
Preference number: 1 (lower is better)
Translates to: PVKSLGNLSATPINP*LPHLRGLPVGHCPR
Trigger: TCTTGGGCAGTGACCCACTGGGAGCCCTCTCAAGTGGGGAAGCCATGGATTTATCGGTGTAGCAGAGAGGTTCCCAAGACTCTTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 90 bp ACCCTGGCTGCACATTGGAAGCACCTGGGAAGCTTTCTGAATTCCTaGGGCCCGAGCCACACCCTAAACCAATTTCATCAGAATCTCTGG +
Preference number: 1 (lower is better)
Translates to: TLAAHWKHLGSFLNS*GPSHTLNQFHQNLW
Trigger: CCAGAGATTCTGATGAAATTGGTTTAGGGTGTGGCTCGGGCCTCAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 90 bp GAGAGTCCTGGCCAATCAGCTGTGACCTGCTGTCCAAGTGCATTGTaGCCCCAGGTCGGAATGAGTTCTTTATGCAGACATAATGAGCAG +
Preference number: 1 (lower is better)
Translates to: ESPGQSAVTCCPSAL*PQVGMSSLCRHNEQ
Trigger: CTGCTCATTATGTCTGCATAAAGAACTCATTCCGACCTGGGGTCACAATGCACTTGGACAGCAGGTCACAGCTGATTGGCCAGGACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 90 bp TCCCTGGAACAGCCTCTGAATTTGCCTACACACATTCCAGAACTATaGCTTGGTCACACCCACTCCCAGGACCAGTCAAGAGTCTTGGGA +
Preference number: 1 (lower is better)
Translates to: SLEQPLNLPTHIPEL*LGHTHSQDQSRVLG
Trigger: TCCCAAGACTCTTGACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCAAATTCAGAGGCTGTTCCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 90 bp AACTATGACTTGGTCACACCCACTCCCAGGACCAGTCAAGAGTCTTaGGAACCTCTCTGCTACACCGATAAATCCATGGCTTCCCCACTT +
Preference number: 1 (lower is better)
Translates to: NYDLVTPTPRTSQES*EPLCYTDKSMASPL
Trigger: AAGTGGGGAAGCCATGGATTTATCGGTGTAGCAGAGAGGTTCCCAAGACTCTTGACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 90 bp GGAACAGCCTCTGAATTTGCCTACACACATTCCAGAACTATGACTTaGTCACACCCACTCCCAGGACCAGTCAAGAGTCTTGGGAACCTC +
Preference number: 1 (lower is better)
Translates to: GTASEFAYTHSRTMT*SHPLPGPVKSLGNL
Trigger: GAGGTTCCCAAGACTCTTGACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCAAATTCAGAGGCTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 90 bp CCACCTAACACAGTATCAAAATCCCCTCTTCCCTGGAACAGCCTCTaGATTTGCCTACACACATTCCAGAACTATGACTTGGTCACACCC +
Preference number: 1 (lower is better)
Translates to: PPNTVSKSPLPWNSL*ICLHTFQNYDLVTP
Trigger: GGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCAAATTCAGAGGCTGTTCCAGGGAAGAGGGGATTTTGATACTGTGTTAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 90 bp CTAGCACACAGTAGGCCTTCGGTAGGTATCTGTGGAACCCACGAGTaGGTTTCCTATTTCATTATCTGTTCCCCTATGCTCTCTATTTTT +
Preference number: 1 (lower is better)
Translates to: LAHSRPSVGICGTHE*VSYFIICSPMLSIF
Trigger: AAAAATAGAGAGCATAGGGGAACAGATAATGAAATAGGAAACCCACTCGTGGGTTCCACAGATACCTACCGAAGGCCTACTGTGTGCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 90 bp TTGTCAGTTGTTAAGATCACACTTGGTCACATTTTCCCATTTCTGTaGATCTTGCAACTTATCTTTGCCCAGAGCAACAGCCTAGACATG +
Preference number: 1 (lower is better)
Translates to: LSVVKITLGHIFPFL*ILQLIFAQSNSLDM
Trigger: CATGTCTAGGCTGTTGCTCTGGGCAAAGATAAGTTGCAAGATTCACAGAAATGGGAAAATGTGACCAAGTGTGATCTTAACAACTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 90 bp ATCTTTGAAGTCCTTTATTCCCAGCAGTTCACATCAGTTACTCATTaGGCTGGGGTTCGTCATATTAACCAAGAATTCATTCATCTTTCT +
Preference number: 1 (lower is better)
Translates to: IFEVLYSQQFTSVTH*AGVRHINQEFIHLS
Trigger: AGAAAGATGAATGAATTCTTGGTTAATATGACGAACCCCAGCTCAATGAGTAACTGATGTGAACTGCTGGGAATAAAGGACTTCAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 90 bp GACATGTATATATTTCTTAAAAGCCCTTCAAAAACCAGAGCTCACTaGTTAGGCACTATGGTTATAACACAGACATGTTCTTGGAAGCAT +
Preference number: 1 (lower is better)
Translates to: DMYIFLKSPSKTRAH*LGTMVITQTCSWKH
Trigger: ATGCTTCCAAGAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTTTTAAGAAATATATACATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 90 bp GCATATCTAAACTACCTCCTGTTTGACACACATTCTAACTTGGGTTaGTTACAAACTTTGTCAGTTGTTAAGATCACACTTGGTCACATT +
Preference number: 1 (lower is better)
Translates to: AYLNYLLFDTHSNLG*LQTLSVVKITLGHI
Trigger: AATGTGACCAAGTGTGATCTTAACAACTGACAAAGTTTGTAACCAACCCAAGTTAGAATGTGTGTCAAACAGGAGGTAGTTTAGATATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGCCACACCAAGCACTCTaGGAGGCCCGCCCATGTCTT +
Preference number: 2 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARPHQAL*EARPCL
Trigger: AAGACATGGGCGGGCCTCGCAGAGTGCTTGGTGTGG...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGTCACCCACCCTGGCCTaGTCTTCCCTTCCACCTCCA +
Preference number: 2 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARSPTLA*SSLPPP
Trigger: TGGAGGTGGAAGGGAAGACCAGGCCAGGGTGGGTGA...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTTTGCTGCCACAGGCATaGGCGTGGGGGAGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLLLPQA*AWGRAA
Trigger: TGCTGCCCTCCCCCACGCCCATGCCTGTGGCAGCAA...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR TCA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTCATGGCTTCCCCACTTaGGAGGGCTCCCAGTGGGTC +
Preference number: 2 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSHGFPT*EGSQWV
Trigger: GACCCACTGGGAGCCCTCTCAAGTGGGGAAGCCATG...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR TCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTCTTCTGGCTGCCTCCTaGGTGTGCTTCACCCACCCT +
Preference number: 2 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLLLAAS*VCFTHP
Trigger: AGGGTGGGTGAAGCACACTCAGGAGGCAGCCAGAAG...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR TCA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTGACCCCAGGTCGGAATaGGTTCTTTATGCAGACATA +
Preference number: 2 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGDPRSE*VLYADI
Trigger: TATGTCTGCATAAAGAACTCATTCCGACCTGGGGTC...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR TCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGCACAACCCTGTGAGTaGGGTCTTTCTGGATGGGAA +
Preference number: 2 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSAQPCE*GLSGWE
Trigger: TTCCCATCCAGAAAGACCTCACTCACAGGGTTGTGC...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGCATCACATCCACGGCTaGCTCCAGGACCTCAGGGGC +
Preference number: 2 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVHHIHG*LQDLRG
Trigger: GCCCCTGAGGTCCTGGAGGCAGCCGTGGATGTGATG...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp GTCCCTAACCCTGGCTGCACATTGGAAGCACCTGGGAAGCTTTCTGAATTCCTGCACTGCACCCAACATTaGCCCAGCAGGTCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: VPNPGCTLEAPGKLSEFLHCTQH*PSRSVL
Trigger: GAGGACTGACCTGCTGGGGCAATGTTGGGTGCAGTG...CAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTGCCAGTTGAAACCTaGCATGGTAACTTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGLPVET*HGNFSE
Trigger: CTCACTGAAGTTACCATGGCAGGTTTCAACTGGCAG...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTGTGCTTCACCCACCCTaGCCTGGTCTTCCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTVLHPP*PGLPFH
Trigger: GTGGAAGGGAAGACCAGGCCAGGGTGGGTGAAGCAC...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp GTCCCTAACCCTGGCTGCACATTGGAAGCACCTGGGAAGCTTTCTGAATTCCTGCATAATGAGCAGTCCTaGCTGGAGCCTCCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: VPNPGCTLEAPGKLSEFLHNEQS*LEPPVP
Trigger: GGGCACAGGAGGCTCCAGCCAGGACTGCTCATTATG...CAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCCCCAAGGTAGATCCTaGGTTACAGGAAAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGPQGRS*VTGKKA
Trigger: AGCTTTCTTTCCTGTAACCCAGGATCTACCTTGGGG...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp GAGACCTGGCAGAACAGGCTGTCCCCTTTCACACTGCCTTTAAAGCGCCTGTTTCCCATGTCTTCTGGCTaGCTCCTGAGTGTGCTTCAC +
Preference number: 2 (lower is better)
Translates to: ETWQNRLSPFTLPLKRLFPMSSG*LLSVLH
Trigger: GTGAAGCACACTCAGGAGGCAGCCAGAAGACATGGG...AAACAGGCGCTTTAAAGGCAGTGTGAAAGGGGACAGCCTGTTCTGCCAGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTGACCTGCTGTCCAAGTaGATTGTGACCCCAGGTCGG +
Preference number: 2 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLDLLSK*IVTPGR
Trigger: CCGACCTGGGGTCACAATGCACTTGGACAGCAGGTC...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGCCAGAACCCGCTTCCTaGAACCACACAGCACGCAGG +
Preference number: 2 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVPEPAS*NHTARR
Trigger: CCTGCGTGCTGTGTGGTTGCAGGAAGCGGGTTCTGG...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTACTGGCCATAACCTATaGAGAGTCCTGGCCAATCAG +
Preference number: 2 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSTGHNL*RVLANQ
Trigger: CTGATTGGCCAGGACTCTCCATAGGTTATGGCCAGT...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CAA 90 bp GCAGCATGCCGGGGGCCACCCCGAGATCACTGCTGTCATTTACATTaGTATCACACTTCACAGTTTACAGGGAGCTCTGCATGCTTAGCC +
Preference number: 2 (lower is better)
Translates to: AACRGPPRDHCCHLH*YHTSQFTGSSACLA
Trigger: GGCTAAGCATGCAGAGCTCCCTGTAAACTGTGAAGTGTGATACAAATGTAAATGACAGCAGTGATCTCGGGGTGGCCCCCGGCATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGAAGCAGGGACTGCACTaGACCCAACATTGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVKQGLH*TQHCPS
Trigger: GCTGGGGCAATGTTGGGTGCAGTGCAGTCCCTGCTT...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCACACCGATAAATCCATaGCTTCCCCACTTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVTPINP*LPHLRG
Trigger: CCCTCTCAAGTGGGGAAGCCATGGATTTATCGGTGT...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR TCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTTGTCCAAGTGCATTGTaGCCCCAGGTCGGAATGAGT +
Preference number: 2 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLCPSAL*PQVGMS
Trigger: ACTCATTCCGACCTGGGGTCACAATGCACTTGGACA...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp AGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTGGCTCACTTACCAAGTTAAAGGGTCCCACAGCCAATTaGATCACATCCACGGCTGCC +
Preference number: 2 (lower is better)
Translates to: RGSNFQVLEWGGSLTKLKGPTAN*ITSTAA
Trigger: GGCAGCCGTGGATGTGATGCAATTGGCTGTGGGACC...CTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp AGAATGGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCTACATAGAATGCAGTCCCGCCCATGTCTTCTaGCTGCCTCCTGAGTGTGCT +
Preference number: 2 (lower is better)
Translates to: RMGWLTYQVKEAGYIECSPAHVF*LPPECA
Trigger: AGCACACTCAGGAGGCAGCCAGAAGACATGGGCGGG...ACTGCATTCTATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp GTCCCTAACCCTGGCTGCACATTGGAAGCACCTGGGAAGCTTTCTGAATTCCTGTTTCATCAGAATCTCTaGGTGGGACGGAGCCTGGAT +
Preference number: 2 (lower is better)
Translates to: VPNPGCTLEAPGKLSEFLFHQNL*VGRSLD
Trigger: ATCCAGGCTCCGTCCCACCCAGAGATTCTGATGAAA...CAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTCTAGCTTACAGCTCATaGCCATCTCTGGCACCAGGT +
Preference number: 2 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLLAYSS*PSLAPG
Trigger: ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAG...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CAA 90 bp ACCCACCAGGCCTTATCACCGCCTTCCCAGAGTTTCCTCTATGATTaGCATACCCCTTTGTTCCCTAGTCCTGAGAACACAGCAGTAGCT +
Preference number: 2 (lower is better)
Translates to: THQALSPPSQSFLYD*HTPLFPSPENTAVA
Trigger: AGCTACTGCTGTGTTCTCAGGACTAGGGAACAAAGGGGTATGCAAATCATAGAGGAAACTCTGGGAAGGCGGTGATAAGGCCTGGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCTCTTGGGAACCTCTCTaGTACACCGATAAATCCATG +
Preference number: 2 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVSWEPL*YTDKSM
Trigger: CATGGATTTATCGGTGTAGCAGAGAGGTTCCCAAGA...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp GAGACCTGGCAGAACAGGCTGTCCCCTTTCACACTGCCTTTAAAGCGCCTGTTTGTCATGCAGTCTTCATaGTTTAACAGGCCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: ETWQNRLSPFTLPLKRLFVMQSS*FNRPRG
Trigger: TCCTCTGGGCCTGTTAAAGCATGAAGACTGCATGAC...AAACAGGCGCTTTAAAGGCAGTGTGAAAGGGGACAGCCTGTTCTGCCAGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp GTCCCTAACCCTGGCTGCACATTGGAAGCACCTGGGAAGCTTTCTGAATTCCTGAGGAACCGTAGGGCTTaGATTTCTCTTGTGTCATGC +
Preference number: 2 (lower is better)
Translates to: VPNPGCTLEAPGKLSEFLRNRRA*ISLVSC
Trigger: GCATGACACAAGAGAAATGCAAGCCCTACGGTTCCT...CAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGACCTATGGAGAGTCCTaGCCAATCAGCTGTGACCTG +
Preference number: 2 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVTYGES*PISCDL
Trigger: CAGGTCACAGCTGATTGGCCAGGACTCTCCATAGGT...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTTCCAGAACTATGACTTaGTCACACCCACTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLSRTMT*SHPLPG
Trigger: TCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGA...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR TCA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCCTGACTCATTGGTTATaGTGTCTCCTGATACCATGT +
Preference number: 2 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVLTHWL*CLLIPC
Trigger: ACATGGTATCAGGAGACATCATAACCAATGAGTCAG...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGGAATGAGTTCTTTATaGAGACATAATGAGCAGTCC +
Preference number: 2 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSGMSSL*RHNEQS
Trigger: GGACTGCTCATTATGTCTGCATAAAGAACTCATTCC...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGGCCTCCCCCATCATTTaGCAATGTAGGCTCCAAAGA +
Preference number: 2 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVASPII*QCRLQR
Trigger: TCTTTGGAGCCTACATTGCCAAATGATGGGGGAGGC...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGACCAGTCAAGAGTCTTaGGAACCTCTCTGCTACACC +
Preference number: 2 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVTSQES*EPLCYT
Trigger: GGTGTAGCAGAGAGGTTCCCAAGACTCTTGACTGGT...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CAA 90 bp TTATCACCGCCTTCCCAGAGTTTCCTCTATGATTTGCATACCCCTTaGTTCCCTAGTCCTGAGAACACAGCAGTAGCTGTTCACCTGCTG +
Preference number: 2 (lower is better)
Translates to: LSPPSQSFLYDLHTP*FPSPENTAVAVHLL
Trigger: CAGCAGGTGAACAGCTACTGCTGTGTTCTCAGGACTAGGGAACAAAGGGGTATGCAAATCATAGAGGAAACTCTGGGAAGGCGGTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTCATTTCTGTGAATCTTaGAACTTATCTTTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSHFCES*NLSLPR
Trigger: TCTGGGCAAAGATAAGTTGCAAGATTCACAGAAATG...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACGTTTACAGGGAGCTCTaGATGCTTAGCCCCACGTCA +
Preference number: 2 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDVYREL*MLSPTS
Trigger: TGACGTGGGGCTAAGCATGCAGAGCTCCCTGTAAAC...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGGTTTCCTCTATGATTTaGATACCCCTTTGTTCCCTA +
Preference number: 2 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVVSSMI*IPLCSL
Trigger: TAGGGAACAAAGGGGTATGCAAATCATAGAGGAAAC...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR GCA 90 bp AGAATGGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCTACATAGAATGCAGTCCACCCCGAGATCACTaGTGTCATTTACATTTGTAT +
Preference number: 2 (lower is better)
Translates to: RMGWLTYQVKEAGYIECSPPRDH*CHLHLY
Trigger: ATACAAATGTAAATGACAGCAGTGATCTCGGGGTGG...ACTGCATTCTATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR TCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACCCAGAGTTTCCTCTATaGTTTGCATACCCCTTTGTT +
Preference number: 2 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDPEFPL*FAYPFV
Trigger: AACAAAGGGGTATGCAAATCATAGAGGAAACTCTGG...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR TCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCCAGGTCAGTCCTCCTTaGACAGGAACTGTTTTTGAG +
Preference number: 2 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFQVSPP*TGTVFE
Trigger: CTCAAAAACAGTTCCTGTTCAAGGAGGACTGACCTG...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CCA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACTGTGGAACCCACGAGTaGGTTTCCTATTTCATTATC +
Preference number: 2 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYCGTHE*VSYFII
Trigger: GATAATGAAATAGGAAACCCACTCGTGGGTTCCACA...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR TCA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACTTTATTTTCCCTTCATaGCATAGACTTGGTTCCAAG +
Preference number: 2 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYFIFPS*HRLGSK
Trigger: CTTGGAACCAAGTCTATGTCATGAAGGGAAAATAAA...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CAA 90 bp TTGGAAGCATATCTAAACTACCTCCTGTTTGACACACATTCTAACTaGGGTTGGTTACAAACTTTGTCAGTTGTTAAGATCACACTTGGT +
Preference number: 2 (lower is better)
Translates to: LEAYLNYLLFDTHSN*GWLQTLSVVKITLG
Trigger: ACCAAGTGTGATCTTAACAACTGACAAAGTTTGTAACCAACCCAAGTTAGAATGTGTGTCAAACAGGAGGTAGTTTAGATATGCTTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CAA 90 bp TGTTTGACACACATTCTAACTTGGGTTGGTTACAAACTTTGTCAGTaGTTAAGATCACACTTGGTCACATTTTCCCATTTCTGTGAATCT +
Preference number: 2 (lower is better)
Translates to: CLTHILTWVGYKLCQ*LRSHLVTFSHFCES
Trigger: AGATTCACAGAAATGGGAAAATGTGACCAAGTGTGATCTTAACAACTGACAAAGTTTGTAACCAACCCAAGTTAGAATGTGTGTCAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 72 bp CTCTGCGAGGCCCGCCCATGTCTTCTGGCTGCCTCCTaGGTGTGCTTCACCCACCCTGGCCTGGTCTTCCCT +
Preference number: 3 (lower is better)
Translates to: LCEARPCLLAAS*VCFTHPGLVFP
Trigger: AGGGAAGACCAGGCCAGGGTGGGTGAAGCACACTCAGGAGGCAGCCAGAAGACATGGGCGGGCCTCGCAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 72 bp CCAAGCACTCTGCGAGGCCCGCCCATGTCTTCTGGCTaGCTCCTGAGTGTGCTTCACCCACCCTGGCCTGGT +
Preference number: 3 (lower is better)
Translates to: PSTLRGPPMSSG*LLSVLHPPWPG
Trigger: ACCAGGCCAGGGTGGGTGAAGCACACTCAGGAGGCAGCCAGAAGACATGGGCGGGCCTCGCAGAGTGCTTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 72 bp CTAAGGTCCCACAGCCAATTGCATCACATCCACGGCTaGCTCCAGGACCTCAGGGGCCACCTGAAACCACTG +
Preference number: 3 (lower is better)
Translates to: LRSHSQLHHIHG*LQDLRGHLKPL
Trigger: CAGTGGTTTCAGGTGGCCCCTGAGGTCCTGGAGGCAGCCGTGGATGTGATGCAATTGGCTGTGGGACCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 72 bp AGCAACAGCCTAGACATGACCACCCCAAGCAGGGACTaGACTGCACCCAACATTGCCCCAGCAGGTCAGTCC +
Preference number: 3 (lower is better)
Translates to: SNSLDMTTPSRD*TAPNIAPAGQS
Trigger: GGACTGACCTGCTGGGGCAATGTTGGGTGCAGTGCAGTCCCTGCTTGGGGTGGTCATGTCTAGGCTGTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 72 bp GGCCATAACCTATGGAGAGTCCTGGCCAATCAGCTGTaGCCTGCTGTCCAAGTGCATTGTGACCCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: GHNLWRVLANQL*PAVQVHCDPRS
Trigger: CGACCTGGGGTCACAATGCACTTGGACAGCAGGTCACAGCTGATTGGCCAGGACTCTCCATAGGTTATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 72 bp AGTCTTGGGAACCTCTCTGCTACACCGATAAATCCATaGCTTCCCCACTTGAGAGGGCTCCCAGTGGGTCAC +
Preference number: 3 (lower is better)
Translates to: SLGNLSATPINP*LPHLRGLPVGH
Trigger: GTGACCCACTGGGAGCCCTCTCAAGTGGGGAAGCCATGGATTTATCGGTGTAGCAGAGAGGTTCCCAAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 72 bp GGGAGGGCAGCATGCCGGGGGCCACCCCGAGATCACTaGTGTCATTTACATTTGTATCACACTTCACAGTTT +
Preference number: 3 (lower is better)
Translates to: GRAACRGPPRDH*CHLHLYHTSQF
Trigger: AAACTGTGAAGTGTGATACAAATGTAAATGACAGCAGTGATCTCGGGGTGGCCCCCGGCATGCTGCCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CAA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGAACAGGAACTGTTTTaGAGGGGCTCCAATTTCCAG +
Preference number: 3 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSEQELF*RGSNFQ
Trigger: CTGGAAATTGGAGCCCCTCAAAAACAGTTCCTGTTC...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 72 bp GAGTCCTGGCCAATCAGCTGTGACCTGCTGTCCAAGTaGATTGTGACCCCAGGTCGGAATGAGTTCTTTATG +
Preference number: 3 (lower is better)
Translates to: ESWPISCDLLSK*IVTPGRNEFFM
Trigger: CATAAAGAACTCATTCCGACCTGGGGTCACAATGCACTTGGACAGCAGGTCACAGCTGATTGGCCAGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 72 bp ACTCCCAGGACCAGTCAAGAGTCTTGGGAACCTCTCTaGTACACCGATAAATCCATGGCTTCCCCACTTGAG +
Preference number: 3 (lower is better)
Translates to: TPRTSQESWEPL*YTDKSMASPLE
Trigger: CTCAAGTGGGGAAGCCATGGATTTATCGGTGTAGCAGAGAGGTTCCCAAGACTCTTGACTGGTCCTGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 72 bp GTTACAGGAAAGAAAGCTATACTGATGAACAAGGTTTaGTGCCACAGGCATGGGCGTGGGGGAGGGCAGCAT +
Preference number: 3 (lower is better)
Translates to: VTGKKAILMNKV*CHRHGRGGGQH
Trigger: ATGCTGCCCTCCCCCACGCCCATGCCTGTGGCAGCAAACCTTGTTCATCAGTATAGCTTTCTTTCCTGTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 72 bp GCACAGCTAAGACTGGCCATAACCTATGGAGAGTCCTaGCCAATCAGCTGTGACCTGCTGTCCAAGTGCATT +
Preference number: 3 (lower is better)
Translates to: AQLRLAITYGES*PISCDLLSKCI
Trigger: AATGCACTTGGACAGCAGGTCACAGCTGATTGGCCAGGACTCTCCATAGGTTATGGCCAGTCTTAGCTGTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CAA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTGACCAGTCAAGAGTCTaGGGAACCTCTCTGCTACAC +
Preference number: 3 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTDQSRV*GTSLLH
Trigger: GTGTAGCAGAGAGGTTCCCAAGACTCTTGACTGGTC...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CAA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGAACAGCCTCTGAATTaGCCTACACACATTCCAGAA +
Preference number: 3 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSEQPLN*PTHIPE
Trigger: TTCTGGAATGTGTGTAGGCAAATTCAGAGGCTGTTC...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 72 bp CCTGCTGTCCAAGTGCATTGTGACCCCAGGTCGGAATaGGTTCTTTATGCAGACATAATGAGCAGTCCTGGC +
Preference number: 3 (lower is better)
Translates to: PAVQVHCDPRSE*VLYADIMSSPG
Trigger: GCCAGGACTGCTCATTATGTCTGCATAAAGAACTCATTCCGACCTGGGGTCACAATGCACTTGGACAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 72 bp GGCCAATCAGCTGTGACCTGCTGTCCAAGTGCATTGTaGCCCCAGGTCGGAATGAGTTCTTTATGCAGACAT +
Preference number: 3 (lower is better)
Translates to: GQSAVTCCPSAL*PQVGMSSLCRH
Trigger: ATGTCTGCATAAAGAACTCATTCCGACCTGGGGTCACAATGCACTTGGACAGCAGGTCACAGCTGATTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 72 bp CAGCCTCTGAATTTGCCTACACACATTCCAGAACTATaGCTTGGTCACACCCACTCCCAGGACCAGTCAAGA +
Preference number: 3 (lower is better)
Translates to: QPLNLPTHIPEL*LGHTHSQDQSR
Trigger: TCTTGACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCAAATTCAGAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 72 bp TTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTaGACCAGACTTCAACTCCTGGAAGTCTTGTTCAGT +
Preference number: 3 (lower is better)
Translates to: FSLHHRRQGVPL*TRLQLLEVLFS
Trigger: ACTGAACAAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 72 bp TTGTATCACACTTCACAGTTTACAGGGAGCTCTGCATaGTTAGCCCCACGTCATTCTCAGCACAACCCTGTG +
Preference number: 3 (lower is better)
Translates to: LYHTSQFTGSSA*LAPRHSQHNPV
Trigger: CACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCTCCCTGTAAACTGTGAAGTGTGATACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 72 bp TACTTTGTGTCTAGGGTAGAGGTCCCTAACCCTGGCTaGACATTGGAAGCACCTGGGAAGCTTTCTGAATTC +
Preference number: 3 (lower is better)
Translates to: YFVSRVEVPNPG*TLEAPGKLSEF
Trigger: GAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGACCTCTACCCTAGACACAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 72 bp ACCAATTTCATCAGAATCTCTGGGTGGGACGGAGCCTaGATTCTGCCAGTTGAAACCTGCCATGGTAACTTC +
Preference number: 3 (lower is better)
Translates to: TNFIRISGWDGA*ILPVETCHGNF
Trigger: GAAGTTACCATGGCAGGTTTCAACTGGCAGAATCCAGGCTCCGTCCCACCCAGAGATTCTGATGAAATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 72 bp CCTTATCACCGCCTTCCCAGAGTTTCCTCTATGATTTaGATACCCCTTTGTTCCCTAGTCCTGAGAACACAG +
Preference number: 3 (lower is better)
Translates to: PYHRLPRVSSMI*IPLCSLVLRTQ
Trigger: CTGTGTTCTCAGGACTAGGGAACAAAGGGGTATGCAAATCATAGAGGAAACTCTGGGAAGGCGGTGATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 72 bp ACATTTGTATCACACTTCACAGTTTACAGGGAGCTCTaGATGCTTAGCCCCACGTCATTCTCAGCACAACCC +
Preference number: 3 (lower is better)
Translates to: TFVSHFTVYREL*MLSPTSFSAQP
Trigger: GGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCTCCCTGTAAACTGTGAAGTGTGATACAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 72 bp CTGTTTTTGAGGGGCTCCAATTTCCAGGTTCTAGAATaGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: LFLRGSNFQVLE*GGSLTKLKRLA
Trigger: AGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCTCAAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 72 bp AGTAGGCCTTCGGTAGGTATCTGTGGAACCCACGAGTaGGTTTCCTATTTCATTATCTGTTCCCCTATGCTC +
Preference number: 3 (lower is better)
Translates to: SRPSVGICGTHE*VSYFIICSPML
Trigger: GAGCATAGGGGAACAGATAATGAAATAGGAAACCCACTCGTGGGTTCCACAGATACCTACCGAAGGCCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 72 bp TTTGAGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTaGCTCACTTACCAAGTTAAAGAGGCTGGCTACATA +
Preference number: 3 (lower is better)
Translates to: FEGLQFPGSRMG*LTYQVKEAGYI
Trigger: TATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CAA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACTTCCAGAACTATGACTaGGTCACACCCACTCCCAGG +
Preference number: 3 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYFQNYD*VTPTPR
Trigger: CCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAA...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 72 bp GGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTaGAAGTCTTGTTCAGTTCATAGGCAAATATCTTTG +
Preference number: 3 (lower is better)
Translates to: GKGYPCEPDFNS*KSCSVHRQISL
Trigger: CAAAGATATTTGCCTATGAACTGAACAAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 72 bp TTTATCAGAAATCTGAGCAGGAAAGAGCAGAGAGAATaGGTCAAGAGCATCCTCTCAAGTGAATTCGCTGCT +
Preference number: 3 (lower is better)
Translates to: FIRNLSRKEQRE*VKSILSSEFAA
Trigger: AGCAGCGAATTCACTTGAGAGGATGCTCTTGACTCATTCTCTCTGCTCTTTCCTGCTCAGATTTCTGATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 72 bp GTTAAGATCACACTTGGTCACATTTTCCCATTTCTGTaGATCTTGCAACTTATCTTTGCCCAGAGCAACAGC +
Preference number: 3 (lower is better)
Translates to: VKITLGHIFPFL*ILQLIFAQSNS
Trigger: GCTGTTGCTCTGGGCAAAGATAAGTTGCAAGATTCACAGAAATGGGAAAATGTGACCAAGTGTGATCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR TCA 72 bp GTCCTTTATTCCCAGCAGTTCACATCAGTTACTCATTaGGCTGGGGTTCGTCATATTAACCAAGAATTCATT +
Preference number: 3 (lower is better)
Translates to: VLYSQQFTSVTH*AGVRHINQEFI
Trigger: AATGAATTCTTGGTTAATATGACGAACCCCAGCTCAATGAGTAACTGATGTGAACTGCTGGGAATAAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR-3UTR CAA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCTACAAACTTTGTCAGTaGTTAAGATCACACTTGGTC +
Preference number: 3 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFYKLCQ*LRSHLV
Trigger: GACCAAGTGTGATCTTAACAACTGACAAAGTTTGTA...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR GCA 72 bp ATATTTCTTAAAAGCCCTTCAAAAACCAGAGCTCACTaGTTAGGCACTATGGTTATAACACAGACATGTTCT +
Preference number: 3 (lower is better)
Translates to: IFLKSPSKTRAH*LGTMVITQTCS
Trigger: AGAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTTTTAAGAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CCA 72 bp AACTACCTCCTGTTTGACACACATTCTAACTTGGGTTaGTTACAAACTTTGTCAGTTGTTAAGATCACACTT +
Preference number: 3 (lower is better)
Translates to: NYLLFDTHSNLG*LQTLSVVKITL
Trigger: AAGTGTGATCTTAACAACTGACAAAGTTTGTAACCAACCCAAGTTAGAATGTGTGTCAAACAGGAGGTAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGGCCCCGCCTGCCTTCTaGGCTCCTCTGCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARAPPAF*APLHWG
Trigger: TCCCCAGTGCAGAGGAGCTCAGAAGGCAGGCGGGGC...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGCCCTGGATGTGCCGCTaGAGCTCCGGCTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARPWMCR*SSGSFR
Trigger: CCGGAAGGAGCCGGAGCTGCAGCGGCACATCCAGGG...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCCACAGGCATGGGCGTaGGGGAGGGCAGCATGCCGG +
Preference number: 4 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGPQAWA*GRAACR
Trigger: CCGGCATGCTGCCCTCCCCCACGCCCATGCCTGTGG...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCCTGTCCGGACTCCCTaGCCTGGAGGATGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGPVRTP*PGGWLV
Trigger: GACGAGCCATCCTCCAGGTCAGGGAGTCCGGACAGG...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGGGTCACAGGCTGGCCTaGCTGCAGGCTCACTTCATG +
Preference number: 4 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARGHRLA*LQAHFM
Trigger: CATGAAGTGAGCCTGCAGGCAGGCCAGCCTGTGACC...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGAGGAGAGCCTGCACCTaGCGTTCAGACCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARRRACT*RSDPGR
Trigger: CCTTCCAGGGTCTGAACGCCAGGTGCAGGCTCTCCT...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCCTGGGCCTCCAGGATaGTCACAGGCTGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGPGPPG*SQAGLP
Trigger: AGGCAGGCCAGCCTGTGACCATCCTGGAGGCCCAGG...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCCACCGCCTCAACGATaGCCTGGATGTGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGPPPQR*PGCAAA
Trigger: TGCAGCGGCACATCCAGGGCATCGTTGAGGCGGTGG...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GCAACCACACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCACCTGAAGGCAGGCTCTaGGACGTGGTGGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ATTQHAGNIIPCDPRPQAPEGRL*DVVVGQ
Trigger: CTGCCCCACCACCACGTCCCAGAGCCTGCCTTCAGG...TGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTGTGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGGGAGCGGTTGTGTGGTaGGAGGTGGCTGCACTTTCT +
Preference number: 4 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARGAVVW*EVAALS
Trigger: AGAAAGTGCAGCCACCTCCCACCACACAACCGCTCC...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GAGAGGGCTCCCAGTGGGTCACTGCCCAAGATAAACTCAGCTTCCAGCATAGAGGGCTCTGGGACGTGGTaGTGGGGCAGCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: ERAPSGSLPKINSASSIEGSGTW*WGSWAM
Trigger: CATGGCCCAGCTGCCCCACCACCACGTCCCAGAGCC...CTCTATGCTGGAAGCTGAGTTTATCTTGGGCAGTGACCCACTGGGAGCCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTTTGCTGCCACAGGCATaGGCGTGGGGGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSLLPQA*AWGRAA
Trigger: TGCTGCCCTCCCCCACGCCCATGCCTGTGGCAGCAA...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGTCCGCGCGCGCAAGGTaGCTGCCGGCGCTCACGCAC +
Preference number: 4 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVSARAR*LPALTH
Trigger: GTGCGTGAGCGCCGGCAGGCACCTTGCGCGCGCGGA...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GAGAGGGCTCCCAGTGGGTCACTGCCCAAGATAAACTCAGCTTCCAGCATAGAGAGTGCCTGGTATGTGTaGCGGGCGGCCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ERAPSGSLPKINSASSIESAWYV*RAASSW
Trigger: CCAGGAGGAGGCCGCCCGGCACACATACCAGGCACT...CTCTATGCTGGAAGCTGAGTTTATCTTGGGCAGTGACCCACTGGGAGCCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTACCCCAAGCAGGGACTaGACTGCACCCAACATTGCC +
Preference number: 4 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGTPSRD*TAPNIA
Trigger: GGCAATGTTGGGTGCAGTGCAGTCCCTGCTTGGGGT...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGCTACCTTGGTGTACTTaGAGGCCACTTCCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARLPWCT*RPLPCA
Trigger: TGCGCAAGGAAGTGGCCTCCAAGTACACCAAGGTAG...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGACCTATGGAGAGTCCTaGCCAATCAGCTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARTYGES*PISCDL
Trigger: CAGGTCACAGCTGATTGGCCAGGACTCTCCATAGGT...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTCCAGAACCCGCTTCCTaGAACCACACAGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSPEPAS*NHTARR
Trigger: CCTGCGTGCTGTGTGGTTGCAGGAAGCGGGTTCTGG...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTCCTTGTCTTCTGTCCTaGGGATCAGCCCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSPCLLS*GSAPPP
Trigger: AGGAGGCGGGGCTGATCCCCAGGACAGAAGACAAGG...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCTCTGGGACGTGGTGGTaGGGCAGCTGGGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVSGTWW*GSWAML
Trigger: AAGCATGGCCCAGCTGCCCCACCACCACGTCCCAGA...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGACACCGATAAATCCATaGCTTCCCCACTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARTPINP*LPHLRG
Trigger: CCCTCTCAAGTGGGGAAGCCATGGATTTATCGGTGT...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GCAACCACACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAAAGGGTACGCGGCTATaGCCTGGTTCATGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ATTQHAGNIIPCDPRPQAKGTRL*PGSWWE
Trigger: TTCCCACCATGAACCAGGTCATAGCCGCGTACCCTT...TGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTGTGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTACCTCAGGGGCCACCTaGAACCACTGGGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSTSGAT*NHWGFP
Trigger: GGGGAACCCCCAGTGGTTTCAGGTGGCCCCTGAGGT...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GCAACCACACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAAGCTTTCTGAATTCCTaGGGCCCGAGCCACACCCTA +
Preference number: 4 (lower is better)
Translates to: ATTQHAGNIIPCDPRPQASFLNS*GPSHTL
Trigger: TAGGGTGTGGCTCGGGCCTCAGGAATTCAGAAAGCT...TGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTGTGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GAGAGGGCTCCCAGTGGGTCACTGCCCAAGATAAACTCAGCTTCCAGCATAGAGCTGCTCAGGAGAGCCTaGACCTGGCGTTCAGACCCT +
Preference number: 4 (lower is better)
Translates to: ERAPSGSLPKINSASSIELLRRA*TWRSDP
Trigger: AGGGTCTGAACGCCAGGTGCAGGCTCTCCTGAGCAG...CTCTATGCTGGAAGCTGAGTTTATCTTGGGCAGTGACCCACTGGGAGCCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCCGTCGGCTCCATGCTTaGCCATGTCAGCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVRRLHA*PCQQVP
Trigger: CGGAACCTGCTGACATGGCCAAGCATGGAGCCGACG...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GTCCCTAACCCTGGCTGCACATTGGAAGCACCTGGGAAGCTTTCTGAATTCCTGGCCTCAACGATGCCCTaGATGTGCCGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VPNPGCTLEAPGKLSEFLASTMP*MCRCSS
Trigger: GGAGCTGCAGCGGCACATCCAGGGCATCGTTGAGGC...CAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCAGGATGGTCACAGGCTaGCCTGCCTGCAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVRMVTG*PACRLT
Trigger: AGTGAGCCTGCAGGCAGGCCAGCCTGTGACCATCCT...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GAGACCTGGCAGAACAGGCTGTCCCCTTTCACACTGCCTTTAAAGCGCCTGTTTCTGGGCTCCGAGCCCTaGCCAAGAAGCCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ETWQNRLSPFTLPLKRLFLGSEP*PRSQKA
Trigger: TGCCTTCTGGCTTCTTGGCCAGGGCTCGGAGCCCAG...AAACAGGCGCTTTAAAGGCAGTGTGAAAGGGGACAGCCTGTTCTGCCAGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GAGAGGGCTCCCAGTGGGTCACTGCCCAAGATAAACTCAGCTTCCAGCATAGAGGTGCTTCACCCACCCTaGCCTGGTCTTCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ERAPSGSLPKINSASSIEVLHPP*PGLPFH
Trigger: GTGGAAGGGAAGACCAGGCCAGGGTGGGTGAAGCAC...CTCTATGCTGGAAGCTGAGTTTATCTTGGGCAGTGACCCACTGGGAGCCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTAGACCTCAGTGTCGATaGGCTCCCGGACAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSRPQCR*APGQPA
Trigger: GGCTGGCTGTCCGGGAGCTCATCGACACTGAGGTCT...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GAGACCTGGCAGAACAGGCTGTCCCCTTTCACACTGCCTTTAAAGCGCCTGTTTACATCCAGATCTCCCTaGGGCAACTGCTGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ETWQNRLSPFTLPLKRLFTSRSP*GNCWRR
Trigger: CCGCCTCCAGCAGTTGCCGCAGGGAGATCTGGATGT...AAACAGGCGCTTTAAAGGCAGTGTGAAAGGGGACAGCCTGTTCTGCCAGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GAGAGGGCTCCCAGTGGGTCACTGCCCAAGATAAACTCAGCTTCCAGCATAGAGGCCCTCTGCAGCACTTaGTTTGCAAGGTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ERAPSGSLPKINSASSIEALCST*FARSLW
Trigger: CCAGAGGGACCTTGCAAAGCAAGTGCTGCAGAGGGC...CTCTATGCTGGAAGCTGAGTTTATCTTGGGCAGTGACCCACTGGGAGCCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTACTCGTCCGGCCCAGTaGGTCCTCCACCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLTRPAQ*VLHQLP
Trigger: AGGAAGCTGGTGGAGGACGCACTGGGCCGGACGAGT...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTCCCTAACCCTGGCTGCACATTGGAAGCACCTGGGAAGCTTTCTGAATTCCTGTCCCAGGGCCATACCTaGTCAGGAGAGCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: VPNPGCTLEAPGKLSEFLSQGHT*SGEPAP
Trigger: AGGTGCAGGCTCTCCTGAGCAGGTATGGCCCTGGGA...CAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTCCCTAACCCTGGCTGCACATTGGAAGCACCTGGGAAGCTTTCTGAATTCCTGACAGGCTGGCCTGCCTaGAGGCTCACTTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: VPNPGCTLEAPGKLSEFLTGWPA*RLTSWL
Trigger: CAGCCATGAAGTGAGCCTGCAGGCAGGCCAGCCTGT...CAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTCCCATGTCTTCTGGCTaGCTCCTGAGTGTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSPMSSG*LLSVLH
Trigger: GTGAAGCACACTCAGGAGGCAGCCAGAAGACATGGG...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCATCACATCCACGGCTaGCTCCAGGACCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTHHIHG*LQDLRG
Trigger: GCCCCTGAGGTCCTGGAGGCAGCCGTGGATGTGATG...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GCAACCACACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGTTTACAGGGAGCTCTaGATGCTTAGCCCCACGTCA +
Preference number: 4 (lower is better)
Translates to: ATTQHAGNIIPCDPRPQAVYREL*MLSPTS
Trigger: TGACGTGGGGCTAAGCATGCAGAGCTCCCTGTAAAC...TGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTGTGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GCAACCACACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGACAGGATAGGCACTaGCATCAGGGACTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: ATTQHAGNIIPCDPRPQAGQDRH*HQGLCS
Trigger: AGAACACAGTCCCTGATGCCAGTGCCTATCCTGTCC...TGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTGTGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCGCACTAGAGCTGGGCTaGGCTCCGGTGTTAGACATC +
Preference number: 4 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVALELG*APVLDI
Trigger: GATGTCTAACACCGGAGCCCAGCCCAGCTCTAGTGC...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTTTACCAGCAAGAAACTaGGGCCTGAAGATCCAGCTT +
Preference number: 4 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGLPARN*GLKIQL
Trigger: AAGCTGGATCTTCAGGCCTCAGTTTCTTGCTGGTAA...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTCAAGGGGTACCCTTGTaGACCAGACTTCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSQGVPL*TRLQLL
Trigger: CAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTG...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTCCCTAACCCTGGCTGCACATTGGAAGCACCTGGGAAGCTTTCTGAATTCCTGGCCAAATTGCAATACTaGACTGCAGGCCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VPNPGCTLEAPGKLSEFLAKLQY*TAGPSG
Trigger: CCCCGAGGGGCCTGCAGTGCAGTATTGCAATTTGGC...CAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTCCACACCAAGCACTCTaGGAGGCCCGCCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLPHQAL*EARPCL
Trigger: AAGACATGGGCGGGCCTCGCAGAGTGCTTGGTGTGG...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTGGCTCACTTACCAAGTTAAAGCCGGACTCCCTGACCTaGAGGATGGCTCGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: RGSNFQVLEWGGSLTKLKPDSLT*RMARRL
Trigger: GAGCCGACGAGCCATCCTCCAGGTCAGGGAGTCCGG...CTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTTCCTGCTTCAGCAGCTaGCTCAGCCGGGTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTSCFSS*LSRVVF
Trigger: GAAGACCACCCGGCTGAGCCAGCTGCTGAAGCAGGA...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGCACTGGGGACCACATaGTACAGCTGTAGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSALGTT*YSCSFP
Trigger: TGGGAAACTACAGCTGTACCATGTGGTCCCCAGTGC...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCCGCCCATGTCTTCTaGCTGCCTCCTGAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTPAHVF*LPPECA
Trigger: AGCACACTCAGGAGGCAGCCAGAAGACATGGGCGGG...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGTGTGGAACCCACGAGTaGGTTTCCTATTTCATTATC +
Preference number: 4 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARCGTHE*VSYFII
Trigger: GATAATGAAATAGGAAACCCACTCGTGGGTTCCACA...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GAGAGGGCTCCCAGTGGGTCACTGCCCAAGATAAACTCAGCTTCCAGCATAGAGTGTCCAGACGCTTCTTaGTCAGGTTCTGAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: ERAPSGSLPKINSASSIECPDAS*SGSEGQ
Trigger: TTGGCCCTCAGAACCTGATCAAGAAGCGTCTGGACA...CTCTATGCTGGAAGCTGAGTTTATCTTGGGCAGTGACCCACTGGGAGCCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCCGCGCGCAAGGTGCCTaGCGGCGCTCACGCACGGAG +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFRAQGA*RRSRTE
Trigger: CTCCGTGCGTGAGCGCCGGCAGGCACCTTGCGCGCG...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTTTGGAGGCTGTCTCCTaGAGATCATGGAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSLEAVS*RSWRNL
Trigger: CAGATTCCTCCATGATCTGCAGGAGACAGCCTCCAA...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTGGCCATGCTTCCCTCTaGCCTCTGCAGCACTTGCTT +
Preference number: 4 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLGHASL*PLQHLL
Trigger: AAGCAAGTGCTGCAGAGGGCAGAGGGAAGCATGGCC...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GAGACCTGGCAGAACAGGCTGTCCCCTTTCACACTGCCTTTAAAGCGCCTGTTTCCTTCTGAGCTCCTCTaGACTGGGGACCACATGGTA +
Preference number: 4 (lower is better)
Translates to: ETWQNRLSPFTLPLKRLFPSELL*TGDHMV
Trigger: TACCATGTGGTCCCCAGTGCAGAGGAGCTCAGAAGG...AAACAGGCGCTTTAAAGGCAGTGTGAAAGGGGACAGCCTGTTCTGCCAGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTTTGTTCAGCCCCGCCTaGCTTCTGAGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTLFSPA*LLSSSA
Trigger: TGCAGAGGAGCTCAGAAGGCAGGCGGGGCTGAACAA...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTGACCTGCTGTCCAAGTaGATTGTGACCCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTDLLSK*IVTPGR
Trigger: CCGACCTGGGGTCACAATGCACTTGGACAGCAGGTC...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTAAGCAGGGACTGCACTaGACCCAACATTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSKQGLH*TQHCPS
Trigger: GCTGGGGCAATGTTGGGTGCAGTGCAGTCCCTGCTT...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTGAAGGAGCGGTTGTGTaGTGGGAGGTGGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTEGAVV*WEVAAL
Trigger: AAGTGCAGCCACCTCCCACCACACAACCGCTCCTTC...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTCTGGCGTTCAGACCCTaGAAGGAGCGGTTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLLAFRP*KERLCG
Trigger: ACCACACAACCGCTCCTTCCAGGGTCTGAACGCCAG...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GCAACCACACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCACCCCAAGGTAGATCCTaGGTTACAGGAAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: ATTQHAGNIIPCDPRPQAPQGRS*VTGKKA
Trigger: AGCTTTCTTTCCTGTAACCCAGGATCTACCTTGGGG...TGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTGTGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CAA 72 bp GGTTACAGGAAAGAAAGCTATACTGATGAACAAGGTTaGCTGCCACAGGCATGGGCGTGGGGGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GYRKESYTDEQG*LPQAWAWGRAA
Trigger: TGCTGCCCTCCCCCACGCCCATGCCTGTGGCAGCAAACCTTGTTCATCAGTATAGCTTTCTTTCCTGTAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CAA 72 bp GAATCTCTGGGTGGGACGGAGCCTGGATTCTGCCAGTaGAAACCTGCCATGGTAACTTCAGTGAGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: ESLGGTEPGFCQ*KPAMVTSVSSY
Trigger: GTAGCTGCTCACTGAAGTTACCATGGCAGGTTTCAACTGGCAGAATCCAGGCTCCGTCCCACCCAGAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CAA 72 bp GTGTCTAGGGTAGAGGTCCCTAACCCTGGCTGCACATaGGAAGCACCTGGGAAGCTTTCTGAATTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VSRVEVPNPGCT*EAPGKLSEFLR
Trigger: CCTCAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGACCTCTACCCTAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GAGAGGGCTCCCAGTGGGTCACTGCCCAAGATAAACTCAGCTTCCAGCATAGAGAGGAAGGCCTCAAGGTaGAGGTCTCTTGCCAAATTG +
Preference number: 4 (lower is better)
Translates to: ERAPSGSLPKINSASSIERKASR*RSLAKL
Trigger: CAATTTGGCAAGAGACCTTCACCTTGAGGCCTTCCT...CTCTATGCTGGAAGCTGAGTTTATCTTGGGCAGTGACCCACTGGGAGCCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTCAGGTCAGTCCTCCTTaGACAGGAACTGTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSQVSPP*TGTVFE
Trigger: CTCAAAAACAGTTCCTGTTCAAGGAGGACTGACCTG...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGACCTGGGAAGCTTTCTaGATTCCTGAGGCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVTWEAF*IPEARA
Trigger: GGCTCGGGCCTCAGGAATTCAGAAAGCTTCCCAGGT...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTACATCAGTTACTCATTaGGCTGGGGTTCGTCATATT +
Preference number: 4 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGTSVTH*AGVRHI
Trigger: AATATGACGAACCCCAGCTCAATGAGTAACTGATGT...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTATTGCAATACTGCACTaGAGGCCCCTCGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLIAILH*RPLGDV
Trigger: GACATCCCCGAGGGGCCTGCAGTGCAGTATTGCAAT...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GAGAGGGCTCCCAGTGGGTCACTGCCCAAGATAAACTCAGCTTCCAGCATAGAGGGTCTCTTGCCAAATTaGAATACTGCACTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ERAPSGSLPKINSASSIEGLLPN*NTALQA
Trigger: GGCCTGCAGTGCAGTATTGCAATTTGGCAAGAGACC...CTCTATGCTGGAAGCTGAGTTTATCTTGGGCAGTGACCCACTGGGAGCCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCTTCCCTCTGCCCTCTaGAGCACTTGCTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTLPSAL*STCFAR
Trigger: CCTTGCAAAGCAAGTGCTGCAGAGGGCAGAGGGAAG...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTGCCAGCGGCCGCTGTTaGCTTTGGTGTCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSASGRC*LWCPCF
Trigger: AAAACAAGGACACCAAAGGCAACAGCGGCCGCTGGC...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTATGAACAAGGTTTGCTaGCACAGGCATGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTMNKVC*HRHGRG
Trigger: CCCACGCCCATGCCTGTGGCAGCAAACCTTGTTCAT...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTAGGAACCGTAGGGCTTaGATTTCTCTTGTGTCATGC +
Preference number: 4 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSRNRRA*ISLVSC
Trigger: GCATGACACAAGAGAAATGCAAGCCCTACGGTTCCT...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GAGAGGGCTCCCAGTGGGTCACTGCCCAAGATAAACTCAGCTTCCAGCATAGAGTCAGCTGCTCTACCTTaGTGTACTTGGAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: ERAPSGSLPKINSASSIESAALP*CTWRPL
Trigger: AAGTGGCCTCCAAGTACACCAAGGTAGAGCAGCTGA...CTCTATGCTGGAAGCTGAGTTTATCTTGGGCAGTGACCCACTGGGAGCCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACGGCCAGGCTGCACAGTaGCTGCCACACCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDGQAAQ*LPHQAF
Trigger: GAAGGCCTGGTGTGGCAGCCACTGTGCAGCCTGGCC...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TCCCAGAGTTTCCTCTATGATTTGCATACCCCTTTGTTCCCTAGTCCTGAGAACAGCGAGTTGAGTGCCTaGTATGTGTGCCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SQSFLYDLHTPLFPSPENSELSA*YVCRAA
Trigger: GGCCGCCCGGCACACATACCAGGCACTCAACTCGCT...GTTCTCAGGACTAGGGAACAAAGGGGTATGCAAATCATAGAGGAAACTCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACGCAGGCTCTGGGACGTaGTGGTGGGGCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYAGSGT*WWGSWA
Trigger: GGCCCAGCTGCCCCACCACCACGTCCCAGAGCCTGC...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTTTCTTGATCAGGTTCTaGGGGCCAAGCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTFLIRF*GPSRAL
Trigger: CAAAGCCCTGCTTGGCCCTCAGAACCTGATCAAGAA...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGGAGTCCCAGTCCCACTaGTGTTGCTTGTCACCTGGT +
Preference number: 4 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVESQSH*CCLSPG
Trigger: ACCAGGTGACAAGCAACATCAGTGGGACTGGGACTC...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTTGTCCAAGTGCATTGTaGCCCCAGGTCGGAATGAGT +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTCPSAL*PQVGMS
Trigger: ACTCATTCCGACCTGGGGTCACAATGCACTTGGACA...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp AGAATGGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCTACATAGAATGCAGTGGCTCGTCGGCTCCATaGTTGGCCATGTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RMGWLTYQVKEAGYIECSGSSAP*LAMSAG
Trigger: ACCTGCTGACATGGCCAAGCATGGAGCCGACGAGCC...ACTGCATTCTATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACCCCTGCGGCAACTGCTaGAGGCGGCTCCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDPCGNC*RRLLMS
Trigger: TGACATCAGGAGCCGCCTCCAGCAGTTGCCGCAGGG...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GTCCCTAACCCTGGCTGCACATTGGAAGCACCTGGGAAGCTTTCTGAATTCCTGTGCAGGCTCACTTCATaGCTGCTTCTGGCCACAAAA +
Preference number: 4 (lower is better)
Translates to: VPNPGCTLEAPGKLSEFLCRLTS*LLLATK
Trigger: TTTTGTGGCCAGAAGCAGCCATGAAGTGAGCCTGCA...CAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GAGACCTGGCAGAACAGGCTGTCCCCTTTCACACTGCCTTTAAAGCGCCTGTTTGCCTCCCCCATCATTTaGCAATGTAGGCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: ETWQNRLSPFTLPLKRLFASPII*QCRLQR
Trigger: TCTTTGGAGCCTACATTGCCAAATGATGGGGGAGGC...AAACAGGCGCTTTAAAGGCAGTGTGAAAGGGGACAGCCTGTTCTGCCAGGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTACCCTGGCTGCACATTaGAAGCACCTGGGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLTLAAH*KHLGSF
Trigger: AAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGT...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACAGAGGGTGTGTGTGTTaGTGCGGGCCAGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYRGCVC*CGPAAP
Trigger: GGGAGCGGCTGGCCCGCATCAACACACACACCCTCT...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCACATTCCAGAACTATaGCTTGGTCACACCCACTCC +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTHIPEL*LGHTHS
Trigger: GGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTG...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCATTTCTGTGAATCTTaGAACTTATCTTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGHFCES*NLSLPR
Trigger: TCTGGGCAAAGATAAGTTGCAAGATTCACAGAAATG...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTAGGCCTGGTCGTAGCTaGCACAGTAGACCTTATAGA +
Preference number: 4 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSRPGRS*HSRPYR
Trigger: TCTATAAGGTCTACTGTGCCAGCTACGACCAGGCCT...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGAATGTGCACATGATCTaGCCCAGCCACTGCATGACC +
Preference number: 4 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVNVHMI*PSHCMT
Trigger: GGTCATGCAGTGGCTGGGCCAGATCATGTGCACATT...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACAGGATGGCCACGATTTaGCCCCGAGGCAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDRMATI*PRGRVR
Trigger: CCTGACTCTGCCTCGGGGCCAAATCGTGGCCATCCT...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTGGCCGCTGTTGCCTTTaGTGTCCTTGTTTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSGRCCL*CPCFEG
Trigger: TCCTTCAAAACAAGGACACCAAAGGCAACAGCGGCC...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTGGCTCACTTACCAAGTTAAAGCTTCATGGCTGCTTCTaGCCACAAAAGGGTACGCGG +
Preference number: 4 (lower is better)
Translates to: RGSNFQVLEWGGSLTKLKLHGCF*PQKGTR
Trigger: CCGCGTACCCTTTTGTGGCCAGAAGCAGCCATGAAG...CTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTTTTCATCAGAATCTCTaGGTGGGACGGAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSFHQNL*VGRSLD
Trigger: ATCCAGGCTCCGTCCCACCCAGAGATTCTGATGAAA...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTGGCTCACTTACCAAGTTAAAGGCTCATGGCCATCTCTaGCACCAGGTCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: RGSNFQVLEWGGSLTKLKAHGHL*HQVYLS
Trigger: GGACAGATAGACCTGGTGCCAGAGATGGCCATGAGC...CTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGCTAGCTTACAGCTCATaGCCATCTCTGGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVLAYSS*PSLAPG
Trigger: ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAG...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTATACATTCTGAGACCTaGCAGAACAGGCTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLIHSET*QNRLSP
Trigger: AGGGGACAGCCTGTTCTGCCAGGTCTCAGAATGTAT...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CAA 72 bp CGGGGGCCACCCCGAGATCACTGCTGTCATTTACATTaGTATCACACTTCACAGTTTACAGGGAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RGPPRDHCCHLH*YHTSQFTGSSA
Trigger: TGCAGAGCTCCCTGTAAACTGTGAAGTGTGATACAAATGTAAATGACAGCAGTGATCTCGGGGTGGCCCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTGACCCCAGGTCGGAATaGGTTCTTTATGCAGACATA +
Preference number: 4 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLDPRSE*VLYADI
Trigger: TATGTCTGCATAAAGAACTCATTCCGACCTGGGGTC...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCCATGGCTTCCCCACTTaGGAGGGCTCCCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFHGFPT*EGSQWV
Trigger: GACCCACTGGGAGCCCTCTCAAGTGGGGAAGCCATG...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp AGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTGGCTCACTTACCAAGTTAAAGGCACAACCCTGTGAGTaGGGTCTTTCTGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: RGSNFQVLEWGGSLTKLKAQPCE*GLSGWE
Trigger: TTCCCATCCAGAAAGACCTCACTCACAGGGTTGTGC...CTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTAGGCCTTCTAGCCGTTaGTTAAATTTCAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTRPSSR*LNFRKA
Trigger: GGCCTTCCTGAAATTTAAGCAACGGCTAGAAGGCCT...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACGGGCTTTGGCCAGGCTaGACAGTGGCTGCCACACCA +
Preference number: 4 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYGLWPG*TVAATP
Trigger: TGGTGTGGCAGCCACTGTGCAGCCTGGCCAAAGCCC...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp AGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTGGCTCACTTACCAAGTTAAAGATCTGGCCCAGCCACTaGATGACCAGCTGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: RGSNFQVLEWGGSLTKLKIWPSH*MTSWLN
Trigger: GTTTAACCAGCTGGTCATGCAGTGGCTGGGCCAGAT...CTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTTTCCTCTATGATTTaGATACCCCTTTGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSVSSMI*IPLCSL
Trigger: TAGGGAACAAAGGGGTATGCAAATCATAGAGGAAAC...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TCCCAGAGTTTCCTCTATGATTTGCATACCCCTTTGTTCCCTAGTCCTGAGAACTTCCCCTTCTTGTCCTaGGCCTCCAGGATGGTCACA +
Preference number: 4 (lower is better)
Translates to: SQSFLYDLHTPLFPSPENFPFLS*ASRMVT
Trigger: TGTGACCATCCTGGAGGCCCAGGACAAGAAGGGGAA...GTTCTCAGGACTAGGGAACAAAGGGGTATGCAAATCATAGAGGAAACTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCGATATCATCAATGTTTaGGAACAGGACATCCAGATC +
Preference number: 4 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVDIINV*EQDIQI
Trigger: GATCTGGATGTCCTGTTCTCAAACATTGATGATATC...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp TCCCAGAGTTTCCTCTATGATTTGCATACCCCTTTGTTCCCTAGTCCTGAGAACTGTATTCGTGCGGCCTaGAGTAGAGGAAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SQSFLYDLHTPLFPSPENCIRAA*SRGKPA
Trigger: TGCAGGCTTTCCTCTACTTCAGGCCGCACGAATACA...GTTCTCAGGACTAGGGAACAAAGGGGTATGCAAATCATAGAGGAAACTCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCCTTCTGGCTGCCTCCTaGGTGTGCTTCACCCACCCT +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFLLAAS*VCFTHP
Trigger: AGGGTGGGTGAAGCACACTCAGGAGGCAGCCAGAAG...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GAGACCTGGCAGAACAGGCTGTCCCCTTTCACACTGCCTTTAAAGCGCCTGTTTCCAGAGTTTCCTCTATaGTTTGCATACCCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: ETWQNRLSPFTLPLKRLFPEFPL*FAYPFV
Trigger: AACAAAGGGGTATGCAAATCATAGAGGAAACTCTGG...AAACAGGCGCTTTAAAGGCAGTGTGAAAGGGGACAGCCTGTTCTGCCAGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTAAAGAGCAGAGAGAATaGGTCAAGAGCATCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLKEQRE*VKSILS
Trigger: TGAGAGGATGCTCTTGACTCATTCTCTCTGCTCTTT...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCAGGCTGCACAGTGGCTaGCACACCAGGCCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFRLHSG*HTRPSS
Trigger: GCTAGAAGGCCTGGTGTGGCAGCCACTGTGCAGCCT...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACCTGCAGCACTTGCTTTaGAAGGTCCCTCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDLQHLL*KVPLEG
Trigger: ACCCTCCAGAGGGACCTTGCAAAGCAAGTGCTGCAG...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCCTCATCTTCTCAACATaGATTTTCCCACTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVLIFST*IFPLFS
Trigger: ACTGAAGAGTGGGAAAATGCATGTTGAGAAGATGAG...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCGCTGGCTCAGCCGGGTaGTCTTCTTGGAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFAGSAG*SSWRGC
Trigger: ACACCCTCTCCAAGAAGACCACCCGGCTGAGCCAGC...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTGGCTCACTTACCAAGTTAAAGCACTGCATGACCAGCTaGTTAAACTGTGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RGSNFQVLEWGGSLTKLKHCMTS*LNCGSS
Trigger: TGAGCTCCCACAGTTTAACCAGCTGGTCATGCAGTG...CTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TCCCAGAGTTTCCTCTATGATTTGCATACCCCTTTGTTCCCTAGTCCTGAGAACTTTGCAAGGTCCCTCTaGAGGGTCACGAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: SQSFLYDLHTPLFPSPENFARSL*RVTNVH
Trigger: GTGCACATTCGTGACCCTCCAGAGGGACCTTGCAAA...GTTCTCAGGACTAGGGAACAAAGGGGTATGCAAATCATAGAGGAAACTCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTGGCTCACTTACCAAGTTAAAGTTGTGTGGTGGGAGGTaGCTGCACTTTCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: RGSNFQVLEWGGSLTKLKLCGGR*LHFLKG
Trigger: ACCTTTGAGAAAGTGCAGCCACCTCCCACCACACAA...CTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCTCACCCACCCTGGCCTaGTCTTCCCTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFSPTLA*SSLPPP
Trigger: TGGAGGTGGAAGGGAAGACCAGGCCAGGGTGGGTGA...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACCCACTAGCAGCGAGTTaGGTGCCTGGTATGTGTGCC +
Preference number: 4 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYPLAAS*VPGMCA
Trigger: GGCACACATACCAGGCACTCAACTCGCTGCTAGTGG...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTCTGACTCATTGGTTATaGTGTCTCCTGATACCATGT +
Preference number: 4 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLLTHWL*CLLIPC
Trigger: ACATGGTATCAGGAGACATCATAACCAATGAGTCAG...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GAGACCTGGCAGAACAGGCTGTCCCCTTTCACACTGCCTTTAAAGCGCCTGTTTAATAAATATACATTCTaGGACCTGGCAGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: ETWQNRLSPFTLPLKRLFNKYTF*DLAEQA
Trigger: AGCCTGTTCTGCCAGGTCTCAGAATGTATATTTATT...AAACAGGCGCTTTAAAGGCAGTGTGAAAGGGGACAGCCTGTTCTGCCAGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp AGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTGGCTCACTTACCAAGTTAAAGTTATCCCCTGGTCTATaGGAAACCATAACCCACGTG +
Preference number: 4 (lower is better)
Translates to: RGSNFQVLEWGGSLTKLKLSPGL*ETITHV
Trigger: CACGTGGGTTATGGTTTCTCATAGACCAGGGGATAA...CTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCCCTGGTAGGTCACACTaGCCACCTCCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFPGRSH*PPPAAS
Trigger: AGAAGCTGCTGGAGGTGGGCAGTGTGACCTACCAGG...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGTCTTGGGAACCTCTCTaGTACACCGATAAATCCATG +
Preference number: 4 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVSWEPL*YTDKSM
Trigger: CATGGATTTATCGGTGTAGCAGAGAGGTTCCCAAGA...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACGGTCCCACAGCCAATTaGATCACATCCACGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYGPTAN*ITSTAA
Trigger: GGCAGCCGTGGATGTGATGCAATTGGCTGTGGGACC...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACCACTGCACCCAACATTaGCCCAGCAGGTCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYHCTQH*PSRSVL
Trigger: GAGGACTGACCTGCTGGGGCAATGTTGGGTGCAGTG...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACTTGGTGTTCACGTCCTaGAGGGCAGAGACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYLVFTS*RAETAL
Trigger: GAGGGCTGTCTCTGCCCTCCAGGACGTGAACACCAA...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TCCCAGAGTTTCCTCTATGATTTGCATACCCCTTTGTTCCCTAGTCCTGAGAACTACGCGGCTATGACCTaGTTCATGGTGGGAATAGAG +
Preference number: 4 (lower is better)
Translates to: SQSFLYDLHTPLFPSPENYAAMT*FMVGIE
Trigger: CTCTATTCCCACCATGAACCAGGTCATAGCCGCGTA...GTTCTCAGGACTAGGGAACAAAGGGGTATGCAAATCATAGAGGAAACTCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCCATAATGAGCAGTCCTaGCTGGAGCCTCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFHNEQS*LEPPVP
Trigger: GGGCACAGGAGGCTCCAGCCAGGACTGCTCATTATG...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGAATGGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCTACATAGAATGCAGTACTGGCCATAACCTATaGAGAGTCCTGGCCAATCAG +
Preference number: 4 (lower is better)
Translates to: RMGWLTYQVKEAGYIECSTGHNL*RVLANQ
Trigger: CTGATTGGCCAGGACTCTCCATAGGTTATGGCCAGT...ACTGCATTCTATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCCTGACCAGGCAGTTCTaGACTCCTCCAGAACCCGCT +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFLTRQF*TPPEPA
Trigger: AGCGGGTTCTGGAGGAGTCCAGAACTGCCTGGTCAG...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGAATGGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCTACATAGAATGCAGTACCAGTCAAGAGTCTTaGGAACCTCTCTGCTACACC +
Preference number: 4 (lower is better)
Translates to: RMGWLTYQVKEAGYIECSTSQES*EPLCYT
Trigger: GGTGTAGCAGAGAGGTTCCCAAGACTCTTGACTGGT...ACTGCATTCTATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTGGTTCTAGAATGGGGTaGCTCACTTACCAAGTTAAA +
Preference number: 4 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTGSRMG*LTYQVK
Trigger: TTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACC...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACCAAGAAACTGAGGCCTaGAGATCCAGCTTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYQETEA*RSSLRH
Trigger: GTGCCGCAAGCTGGATCTTCAGGCCTCAGTTTCTTG...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGGCATCTTGTACTCATTaGTATTGGTGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVASCTH*YWCSRP
Trigger: AGGACGTGAACACCAATATCAATGAGTACAAGATGC...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp AGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTGGCTCACTTACCAAGTTAAAGTTCTCAAAGGTCTCTTaGAAGGAGCGAAGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: RGSNFQVLEWGGSLTKLKFSKVS*KERSWL
Trigger: TAACCAGCTTCGCTCCTTTCAAGAGACCTTTGAGAA...CTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTAAAACCAGAGCTCACTaGTTAGGCACTATGGTTATA +
Preference number: 4 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLKTRAH*LGTMVI
Trigger: TATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTT...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTGGCTCACTTACCAAGTTAAAGCACAGAGACACCCACTaGAACCTCTCTTCTAAATCA +
Preference number: 4 (lower is better)
Translates to: RGSNFQVLEWGGSLTKLKHRDTH*NLSSKS
Trigger: TGATTTAGAAGAGAGGTTCCAGTGGGTGTCTCTGTG...CTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACTCCAGAACTATGACTTaGTCACACCCACTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDSRTMT*SHPLPG
Trigger: TCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGA...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGAATGGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCTACATAGAATGCAGTTTCCAGGTTCTAGAATaGGGTGGCTCACTTACCAAG +
Preference number: 4 (lower is better)
Translates to: RMGWLTYQVKEAGYIECSFQVLE*GGSLTK
Trigger: CTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAA...ACTGCATTCTATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCTTTAATCTTATCCCCTaGTCTATGAGAAACCATAAC +
Preference number: 4 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVFNLIP*SMRNHN
Trigger: GTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CAA 72 bp CCTTCCCAGAGTTTCCTCTATGATTTGCATACCCCTTaGTTCCCTAGTCCTGAGAACACAGCAGTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PSQSFLYDLHTP*FPSPENTAVAV
Trigger: AACAGCTACTGCTGTGTTCTCAGGACTAGGGAACAAAGGGGTATGCAAATCATAGAGGAAACTCTGGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACTTGGTGTCCTTGTTTTaGAGGATGGCCACGATTTGG +
Preference number: 4 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDLVSLF*RMATIW
Trigger: CCAAATCGTGGCCATCCTTCAAAACAAGGACACCAA...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACAACAGGAACTGTTTTTaGGGGGCTCCAATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDNRNCF*GAPISR
Trigger: CCTGGAAATTGGAGCCCCTCAAAAACAGTTCCTGTT...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp AGAATGGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCTACATAGAATGCAGTTACACTGAGAACTCCTaGGCTACAATTCTAGCACAC +
Preference number: 4 (lower is better)
Translates to: RMGWLTYQVKEAGYIECSYTENS*ATILAH
Trigger: GTGTGCTAGAATTGTAGCTCAGGAGTTCTCAGTGTA...ACTGCATTCTATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCGGCTCACTTCATGGCTaGTTCTGGCCACAAAAGGGT +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFGSLHG*FWPQKG
Trigger: ACCCTTTTGTGGCCAGAAGCAGCCATGAAGTGAGCC...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACGTCATGCAGTCTTCATaGTTTAACAGGCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDVMQSS*FNRPRG
Trigger: TCCTCTGGGCCTGTTAAAGCATGAAGACTGCATGAC...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACCTGCCAGTTGAAACCTaGCATGGTAACTTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDLPVET*HGNFSE
Trigger: CTCACTGAAGTTACCATGGCAGGTTTCAACTGGCAG...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCCCTTGTTTTGAAGGATaGCCACGATTTGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFPCFEG*PRFGPE
Trigger: CTCGGGGCCAAATCGTGGCCATCCTTCAAAACAAGG...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTACCAACTAGCTaGACTTGTTCCTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDMLPTS*TCSSSL
Trigger: CAAGGAAGAGGAACAAGTGCAGCTAGTTGGTAACAT...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCTACCTGGTGATCCTCTaGAGAGGAATTACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFYLVIL*RGITSK
Trigger: CTTGCTGGTAATTCCTCTGCAGAGGATCACCAGGTA...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACAAGGTGAAGGTCTCTTaGCAAATTGCAATACTGCAC +
Preference number: 4 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDKVKVS*QIAILH
Trigger: GTGCAGTATTGCAATTTGGCAAGAGACCTTCACCTT...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CCA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACGTCTCCTGCAGATCATaGAGGAATCTGCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYVSCRS*RNLLFT
Trigger: AGTGAACAGCAGATTCCTCCATGATCTGCAGGAGAC...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR TCA 90 bp TCCCAGAGTTTCCTCTATGATTTGCATACCCCTTTGTTCCCTAGTCCTGAGAACTTTATTTTCCCTTCATaGCATAGACTTGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SQSFLYDLHTPLFPSPENFIFPS*HRLGSK
Trigger: CTTGGAACCAAGTCTATGTCATGAAGGGAAAATAAA...GTTCTCAGGACTAGGGAACAAAGGGGTATGCAAATCATAGAGGAAACTCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp AAGCCCTTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACGGAATGAGTTCTTTATaGAGACATAATGAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: KPFKNQSSLLRHYGYNTDGMSSL*RHNEQS
Trigger: GGACTGCTCATTATGTCTGCATAAAGAACTCATTCC...GTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAAGGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp AGAATGGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCTACATAGAATGCAGTATAAATAAGACACAGTaGCATGGTTCTAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: RMGWLTYQVKEAGYIECSINKTQ*HGSRHL
Trigger: CAAATGCCTAGAACCATGGCACTGTGTCTTATTTAT...ACTGCATTCTATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCCCACCCCGAGATCACTaGTGTCATTTACATTTGTAT +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFPPRDH*CHLHLY
Trigger: ATACAAATGTAAATGACAGCAGTGATCTCGGGGTGG...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp AGAATGGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCTACATAGAATGCAGTATTTCTCTTGTGTCATaGAGTCTTCATGCTTTAACA +
Preference number: 4 (lower is better)
Translates to: RMGWLTYQVKEAGYIECSISLVS*SLHALT
Trigger: TGTTAAAGCATGAAGACTGCATGACACAAGAGAAAT...ACTGCATTCTATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR GCA 90 bp TTCAAAAACCAGAGCTCACTGCTTAGGCACTATGGTTATAACACAGACATGTTCTATTTTCCTCCCTTATaGCTACAAGACATCCAATTT +
Preference number: 4 (lower is better)
Translates to: FKNQSSLLRHYGYNTDMFYFPPL*LQDIQF
Trigger: AAATTGGATGTCTTGTAGGCATAAGGGAGGAAAATA...GAACATGTCTGTGTTATAACCATAGTGCCTAAGCAGTGAGCTCTGGTTTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CAA 72 bp TTTGACACACATTCTAACTTGGGTTGGTTACAAACTTaGTCAGTTGTTAAGATCACACTTGGTCACATTTTC +
Preference number: 4 (lower is better)
Translates to: FDTHSNLGWLQT*SVVKITLGHIF
Trigger: GAAAATGTGACCAAGTGTGATCTTAACAACTGACAAAGTTTGTAACCAACCCAAGTTAGAATGTGTGTCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
3UTR CAA 72 bp TATCTAAACTACCTCCTGTTTGACACACATTCTAACTaGGGTTGGTTACAAACTTTGTCAGTTGTTAAGATC +
Preference number: 4 (lower is better)
Translates to: YLNYLLFDTHSN*GWLQTLSVVKI
Trigger: GATCTTAACAACTGACAAAGTTTGTAACCAACCCAAGTTAGAATGTGTGTCAAACAGGAGGTAGTTTAGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 90 bp CCAGCTTGCGGCACCACCGCCTCAACGATGCCCTGGATGTGCCGCTaGAGCTCCGGCTCCTTCCGGTACGTGTCCACCAGTAGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: PACGTTASTMPWMCR*SSGSFRYVSTSSKA
Trigger: GGCCTTGCTACTGGTGGACACGTACCGGAAGGAGCCGGAGCTGCAGCGGCACATCCAGGGCATCGTTGAGGCGGTGGTGCCGCAAGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 90 bp AGGCCTGAAGATCCAGCTTGCGGCACCACCGCCTCAACGATGCCCTaGATGTGCCGCTGCAGCTCCGGCTCCTTCCGGTACGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: RPEDPACGTTASTMP*MCRCSSGSFRYVST
Trigger: GGTGGACACGTACCGGAAGGAGCCGGAGCTGCAGCGGCACATCCAGGGCATCGTTGAGGCGGTGGTGCCGCAAGCTGGATCTTCAGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 90 bp GTCACCTGGTACAGCTTCCCAGGGCCATACCTGCTCAGGAGAGCCTaGACCTGGCGTTCAGACCCTGGAAGGAGCGGCTGGGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: VTWYSFPGPYLLRRA*TWRSDPGRSGWERR
Trigger: CCTCCTCTCCCAGCCGCTCCTTCCAGGGTCTGAACGCCAGGTGCAGGCTCTCCTGAGCAGGTATGGCCCTGGGAAGCTGTACCAGGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509831.1
CDS CCA 90 bp TGGTACAGCTTCCCAGGGCCATACCTGCTCAGGAGAGCCTGCACCTaGCGTTCAGACCCTGGAAGGAGCGGTTGTGTGGTGGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: WYSFPGPYLLRRACT*RSDPGRSGCVVGGG
Trigger: GCCACCTCCCACCACACAACCGCTCCTTCCAGGGTCTGAACGCCAGGTGCAGGCTCTCCTGAGCAGGTATGGCCCTGGGAAGCTGTACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGTCAGGGTTCCCCTTCTaGTCCTGGGCCTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARSGFPF*SWASRM
Trigger: CATCCTGGAGGCCCAGGACAAGAAGGGGAACCCTGA...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 90 bp GTGCCTGGTATGTGTGCCGGGCGGCCTCCTCCTGGTAGGTCACACTaGCCACCTCCAGCAGCTTCTCTTCCACCCGCTCAAAGTCCAGTA +
Preference number: 5 (lower is better)
Translates to: VPGMCAGRPPPGRSH*PPPAASLPPAQSPV
Trigger: TACTGGACTTTGAGCGGGTGGAAGAGAAGCTGCTGGAGGTGGGCAGTGTGACCTACCAGGAGGAGGCCGCCCGGCACACATACCAGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 90 bp GTCACCTGGTACAGCTTCCCAGGGCCATACCTGCTCAGGAGAGCCTaGACCTGGCGTTCAGACCCTGGAAGGAGCGGTTGTGTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: VTWYSFPGPYLLRRA*TWRSDPGRSGCVVG
Trigger: TCCCACCACACAACCGCTCCTTCCAGGGTCTGAACGCCAGGTGCAGGCTCTCCTGAGCAGGTATGGCCCTGGGAAGCTGTACCAGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 90 bp CCATTCACTTCCACCAGGCTCCACTCAGGGTTCCCCTTCTTGTCCTaGGCCTCCAGGATGGTCACAGGCTGGCCTGCCTGCAGGCTCACT +
Preference number: 5 (lower is better)
Translates to: PFTSTRLHSGFPFLS*ASRMVTGWPACRLT
Trigger: AGTGAGCCTGCAGGCAGGCCAGCCTGTGACCATCCTGGAGGCCCAGGACAAGAAGGGGAACCCTGAGTGGAGCCTGGTGGAAGTGAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 90 bp AGGGTGTGTGTGTTGATGCGGGCCAGCCGCTCCCGGAGGGTCAGCTaGTCTACCTTGGTGTACTTGGAGGCCACTTCCTTGCGCATCTTG +
Preference number: 5 (lower is better)
Translates to: RVCVLMRASRSRRVS*STLVYLEATSLRIL
Trigger: CAAGATGCGCAAGGAAGTGGCCTCCAAGTACACCAAGGTAGAGCAGCTGACCCTCCGGGAGCGGCTGGCCCGCATCAACACACACACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 90 bp CATACCCACGATGTCCCCCGGTGTCCACCAGCCAGCGGCCGCTGTTaGCTTTGGTGTCCTTGTTTTGAAGGATGGCCACGATTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: HTHDVPRCPPASGRC*LWCPCFEGWPRFGP
Trigger: GGGGCCAAATCGTGGCCATCCTTCAAAACAAGGACACCAAAGGCAACAGCGGCCGCTGGCTGGTGGACACCGGGGGACATCGTGGGTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000509831.1
CDS CCA 90 bp CCAGCCAGCGGCCGCTGTTGCCTTTGGTGTCCTTGTTTTGAAGGATaGCCACGATTTGGCCCCGAGGCAGAGTCAGGTCCAGAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: PASGRCCLWCPCFEG*PRFGPEAESGPESQ
Trigger: CTGGGACTCTGGACCTGACTCTGCCTCGGGGCCAAATCGTGGCCATCCTTCAAAACAAGGACACCAAAGGCAACAGCGGCCGCTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000509831.1
CDS CCA 90 bp TTCAGCCCCGCCTGCCTTCTGAGCTCCTCTGCACTGGGGACCACATaGTACAGCTGTAGTTTCCCAGCCGGCACATACCCACGATGTCCC +
Preference number: 5 (lower is better)
Translates to: FSPACLLSSSALGTT*YSCSFPAGTYPRCP
Trigger: GGGACATCGTGGGTATGTGCCGGCTGGGAAACTACAGCTGTACCATGTGGTCCCCAGTGCAGAGGAGCTCAGAAGGCAGGCGGGGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000509831.1
CDS CCA 90 bp GCCTCCAGGATGGTCACAGGCTGGCCTGCCTGCAGGCTCACTTCATaGCTGCTTCTGGCCACAAAAGGGTACGCGGCTATGACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: ASRMVTGWPACRLTS*LLLATKGYAAMTWF
Trigger: GAACCAGGTCATAGCCGCGTACCCTTTTGTGGCCAGAAGCAGCCATGAAGTGAGCCTGCAGGCAGGCCAGCCTGTGACCATCCTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTAAGGATGGCCACGATTaGGCCCCGAGGCAGAGTCAG +
Preference number: 5 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGKDGHD*APRQSQ
Trigger: CTGACTCTGCCTCGGGGCCAAATCGTGGCCATCCTT...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS TCA 90 bp GTGTCCACCAGCCAGCGGCCGCTGTTGCCTTTGGTGTCCTTGTTTTaGAGGATGGCCACGATTTGGCCCCGAGGCAGAGTCAGGTCCAGA +
Preference number: 5 (lower is better)
Translates to: VSTSQRPLLPLVSLF*RMATIWPRGRVRSR
Trigger: TCTGGACCTGACTCTGCCTCGGGGCCAAATCGTGGCCATCCTTCAAAACAAGGACACCAAAGGCAACAGCGGCCGCTGGCTGGTGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000509831.1
CDS GCA 90 bp GTTCCCCTTCTTGTCCTGGGCCTCCAGGATGGTCACAGGCTGGCCTaGCTGCAGGCTCACTTCATGGCTGCTTCTGGCCACAAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: VPLLVLGLQDGHRLA*LQAHFMAASGHKRV
Trigger: TACCCTTTTGTGGCCAGAAGCAGCCATGAAGTGAGCCTGCAGGCAGGCCAGCCTGTGACCATCCTGGAGGCCCAGGACAAGAAGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 90 bp TTGTCTTCTGTCCTGGGGATCAGCCCCGCCTCCTGCTTCAGCAGCTaGCTCAGCCGGGTGGTCTTCTTGGAGAGGGTGTGTGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: LSSVLGISPASCFSS*LSRVVFLERVCVLM
Trigger: CATCAACACACACACCCTCTCCAAGAAGACCACCCGGCTGAGCCAGCTGCTGAAGCAGGAGGCGGGGCTGATCCCCAGGACAGAAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 90 bp TCCAAAGAGGGTACCCTAAGAGGGCAGACTCCAGCCCCACAGAACTaGGCTCCGAGCCCTGGCCAAGAAGCCAGAAGGCACATAACCCCT +
Preference number: 5 (lower is better)
Translates to: SKEGTLRGQTPAPQN*APSPGQEARRHITP
Trigger: AGGGGTTATGTGCCTTCTGGCTTCTTGGCCAGGGCTCGGAGCCCAGTTCTGTGGGGCTGGAGTCTGCCCTCTTAGGGTACCCTCTTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GAGAGGGCTCCCAGTGGGTCACTGCCCAAGATAAACTCAGCTTCCAGCATAGAGCCCTGGAAGGAGCGGTaGTGTGGTGGGAGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: ERAPSGSLPKINSASSIEPWKER*CGGRWL
Trigger: CAGCCACCTCCCACCACACAACCGCTCCTTCCAGGG...CTCTATGCTGGAAGCTGAGTTTATCTTGGGCAGTGACCCACTGGGAGCCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGATCTCCACAACTGAGTaGGGGCCTGAGGGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARISTTE*GPEGFK
Trigger: CTTAAACCCCTCAGGCCCCAACTCAGTTGTGGAGAT...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS TCA 90 bp CGCTCAAAGTCCAGTAGCTTGTCCAGACGCTTCTTGATCAGGTTCTaGGGGCCAAGCAGGGCTTTGGCCAGGCTGCACAGTGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: RSKSSSLSRRFLIRF*GPSRALARLHSGCH
Trigger: GTGGCAGCCACTGTGCAGCCTGGCCAAAGCCCTGCTTGGCCCTCAGAACCTGATCAAGAAGCGTCTGGACAAGCTACTGGACTTTGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS TCA 90 bp AGCGGTTGTGTGGTGGGAGGTGGCTGCACTTTCTCAAAGGTCTCTTaGAAGGAGCGAAGCTGGTTACTCGTCCGGCCCAGTGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGCVVGGGCTFSKVS*KERSWLLVRPSASS
Trigger: GGAGGACGCACTGGGCCGGACGAGTAACCAGCTTCGCTCCTTTCAAGAGACCTTTGAGAAAGTGCAGCCACCTCCCACCACACAACCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GCAACCACACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCATGCCCTCTGCAGCACTaGCTTTGCAAGGTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: ATTQHAGNIIPCDPRPQACPLQH*LCKVPL
Trigger: CAGAGGGACCTTGCAAAGCAAGTGCTGCAGAGGGCA...TGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTGTGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 90 bp TCCCTCTGGAGGGTCACGAATGTGCACATGATCTGGCCCAGCCACTaGATGACCAGCTGGTTAAACTGTGGGAGCTCAGCCACTAGCAGC +
Preference number: 5 (lower is better)
Translates to: SLWRVTNVHMIWPSH*MTSWLNCGSSATSS
Trigger: GCTGCTAGTGGCTGAGCTCCCACAGTTTAACCAGCTGGTCATGCAGTGGCTGGGCCAGATCATGTGCACATTCGTGACCCTCCAGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 90 bp ATGCTTCCCTCTGCCCTCTGCAGCACTTGCTTTGCAAGGTCCCTCTaGAGGGTCACGAATGTGCACATGATCTGGCCCAGCCACTGCATG +
Preference number: 5 (lower is better)
Translates to: MLPSALCSTCFARSL*RVTNVHMIWPSHCM
Trigger: CATGCAGTGGCTGGGCCAGATCATGTGCACATTCGTGACCCTCCAGAGGGACCTTGCAAAGCAAGTGCTGCAGAGGGCAGAGGGAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 90 bp GTCACGAATGTGCACATGATCTGGCCCAGCCACTGCATGACCAGCTaGTTAAACTGTGGGAGCTCAGCCACTAGCAGCGAGTTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: VTNVHMIWPSHCMTS*LNCGSSATSSELSA
Trigger: GGCACTCAACTCGCTGCTAGTGGCTGAGCTCCCACAGTTTAACCAGCTGGTCATGCAGTGGCTGGGCCAGATCATGTGCACATTCGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCGCCACTAGCAGCGAGTaGAGTGCCTGGTATGTGTGC +
Preference number: 5 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVATSSE*SAWYVC
Trigger: GCACACATACCAGGCACTCAACTCGCTGCTAGTGGC...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTCCATGGCTTCCCCACTaGAGAGGGCTCCCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSPWLPH*RGLPVG
Trigger: ACCCACTGGGAGCCCTCTCAAGTGGGGAAGCCATGG...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GCAACCACACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCATTCCAGAACTATGACTaGGTCACACCCACTCCCAGG +
Preference number: 5 (lower is better)
Translates to: ATTQHAGNIIPCDPRPQAFQNYD*VTPTPR
Trigger: CCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAA...TGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTGTGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp CACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCAGGCCCGGCACATCAGTTACTCATaGAGCTGGGGTTCGTCATAT +
Preference number: 5 (lower is better)
Translates to: HSTQVTLSRVTHAHRQARHISYS*SWGSSY
Trigger: ATATGACGAACCCCAGCTCAATGAGTAACTGATGTG...CCGGGCCTGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 90 bp TGCTTTGCAAGGTCCCTCTGGAGGGTCACGAATGTGCACATGATCTaGCCCAGCCACTGCATGACCAGCTGGTTAAACTGTGGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: CFARSLWRVTNVHMI*PSHCMTSWLNCGSS
Trigger: TGAGCTCCCACAGTTTAACCAGCTGGTCATGCAGTGGCTGGGCCAGATCATGTGCACATTCGTGACCCTCCAGAGGGACCTTGCAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTTCGTCGGCTCCATGCTaGGCCATGTCAGCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSSSAPC*AMSAGS
Trigger: GGAACCTGCTGACATGGCCAAGCATGGAGCCGACGA...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCTCGGGGATGTCCAGATaGTATTCGTGCGGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVSGMSR*YSCGLK
Trigger: CTTCAGGCCGCACGAATACAATCTGGACATCCCCGA...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTAGACATCGGGGGTCTTaGTTCAGCCCCGCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSRHRGS*FSPACL
Trigger: AAGGCAGGCGGGGCTGAACAAAGACCCCCGATGTCT...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGACCAGTCAAGAGTCTaGGGAACCTCTCTGCTACAC +
Preference number: 5 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSDQSRV*GTSLLH
Trigger: GTGTAGCAGAGAGGTTCCCAAGACTCTTGACTGGTC...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp AGCTCTGCATGCTTAGCCCCACGTCATTCTCAGCACAACCCTGTGAGTGAGGTCAACCCTGGCTGCACATaGGAAGCACCTGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: SSACLAPRHSQHNPVSEVNPGCT*EAPGKL
Trigger: AAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTT...GACCTCACTCACAGGGTTGTGCTGAGAATGACGTGGGGCTAAGCATGCAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 90 bp GAAGGCCTCAAGGTGAAGGTCTCTTGCCAAATTGCAATACTGCACTaGAGGCCCCTCGGGGATGTCCAGATTGTATTCGTGCGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: EGLKVKVSCQIAILH*RPLGDVQIVFVRPE
Trigger: TTCAGGCCGCACGAATACAATCTGGACATCCCCGAGGGGCCTGCAGTGCAGTATTGCAATTTGGCAAGAGACCTTCACCTTGAGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GAGACCTGGCAGAACAGGCTGTCCCCTTTCACACTGCCTTTAAAGCGCCTGTTTTCTACCTTGGTGTACTaGGAGGCCACTTCCTTGCGC +
Preference number: 5 (lower is better)
Translates to: ETWQNRLSPFTLPLKRLFSTLVY*EATSLR
Trigger: GCGCAAGGAAGTGGCCTCCAAGTACACCAAGGTAGA...AAACAGGCGCTTTAAAGGCAGTGTGAAAGGGGACAGCCTGTTCTGCCAGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTAGCCAGCGGCCGCTGTaGCCTTTGGTGTCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLSQRPL*PLVSLF
Trigger: AAACAAGGACACCAAAGGCAACAGCGGCCGCTGGCT...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GCTCAGGTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTGAACAGCCTCTGAATTaGCCTACACACATTCCAGAA +
Preference number: 5 (lower is better)
Translates to: AQVGHVLAYSSWPSLAPGEQPLN*PTHIPE
Trigger: TTCTGGAATGTGTGTAGGCAAATTCAGAGGCTGTTC...ACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCACCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 90 bp GCTCCTTCCGGTACGTGTCCACCAGTAGCAAGGCCTGGTCGTAGCTaGCACAGTAGACCTTATAGACTTGCTCCAACTCCTCTTGGAATT +
Preference number: 5 (lower is better)
Translates to: APSGTCPPVARPGRS*HSRPYRLAPTPLGI
Trigger: AATTCCAAGAGGAGTTGGAGCAAGTCTATAAGGTCTACTGTGCCAGCTACGACCAGGCCTTGCTACTGGTGGACACGTACCGGAAGGAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GTCCCTAACCCTGGCTGCACATTGGAAGCACCTGGGAAGCTTTCTGAATTCCTGACTTGTTCCTCTTCCTaGGAGGCTGTCTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: VPNPGCTLEAPGKLSEFLTCSSS*EAVSCR
Trigger: TCTGCAGGAGACAGCCTCCAAGGAAGAGGAACAAGT...CAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GCAACCACACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCACAAGGTGAAGGTCTCTaGCCAAATTGCAATACTGCA +
Preference number: 5 (lower is better)
Translates to: ATTQHAGNIIPCDPRPQAQGEGL*PNCNTA
Trigger: TGCAGTATTGCAATTTGGCAAGAGACCTTCACCTTG...TGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTGTGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGTCTGCAGCACTTGCTTaGCAAGGTCCCTCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVSAALA*QGPSGG
Trigger: CCCTCCAGAGGGACCTTGCAAAGCAAGTGCTGCAGA...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCAGTCCCACTGATGTaGCTTGTCACCTGGTACAGC +
Preference number: 5 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTPVPLM*LVTWYS
Trigger: GCTGTACCAGGTGACAAGCAACATCAGTGGGACTGG...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGAGGTCCCACAGCCAATaGCATCACATCCACGGCTGC +
Preference number: 5 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVRSHSQ*HHIHGC
Trigger: GCAGCCGTGGATGTGATGCAATTGGCTGTGGGACCT...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS TCA 90 bp CCTTGGTGTACTTGGAGGCCACTTCCTTGCGCATCTTGTACTCATTaGTATTGGTGTTCACGTCCTGGAGGGCAGAGACAGCCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: PWCTWRPLPCASCTH*YWCSRPGGQRQPSE
Trigger: TTCAGAGGGCTGTCTCTGCCCTCCAGGACGTGAACACCAATATCAATGAGTACAAGATGCGCAAGGAAGTGGCCTCCAAGTACACCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS TCA 90 bp ACCAGGCCTTCTAGCCGTTGCTTAAATTTCAGGAAGGCCTCAAGGTaGAGGTCTCTTGCCAAATTGCAATACTGCACTGCAGGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: TRPSSRCLNFRKASR*RSLAKLQYCTAGPS
Trigger: CGAGGGGCCTGCAGTGCAGTATTGCAATTTGGCAAGAGACCTTCACCTTGAGGCCTTCCTGAAATTTAAGCAACGGCTAGAAGGCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GAGAGGGCTCCCAGTGGGTCACTGCCCAAGATAAACTCAGCTTCCAGCATAGAGGAACAGGAACTGTTTTaGAGGGGCTCCAATTTCCAG +
Preference number: 5 (lower is better)
Translates to: ERAPSGSLPKINSASSIEEQELF*RGSNFQ
Trigger: CTGGAAATTGGAGCCCCTCAAAAACAGTTCCTGTTC...CTCTATGCTGGAAGCTGAGTTTATCTTGGGCAGTGACCCACTGGGAGCCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp AGAATGGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCTACATAGAATGCAGTGCACTGCACCCAACATaGCCCCAGCAGGTCAGTCCT +
Preference number: 5 (lower is better)
Translates to: RMGWLTYQVKEAGYIECSALHPT*PQQVSP
Trigger: AGGACTGACCTGCTGGGGCAATGTTGGGTGCAGTGC...ACTGCATTCTATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTTTGGAGGCCACTTCCTaGCGCATCTTGTACTCATTG +
Preference number: 5 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSLEATS*RILYSL
Trigger: CAATGAGTACAAGATGCGCAAGGAAGTGGCCTCCAA...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp TTTAATCTTATCCCCTGGTCTATGAGAAACCATAACCCACGTGCTACTGAATACGAGAGGGTGTGTGTGTaGATGCGGGCCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: FNLIPWSMRNHNPRATEYERVCV*MRASRS
Trigger: GGAGCGGCTGGCCCGCATCAACACACACACCCTCTC...GTATTCAGTAGCACGTGGGTTATGGTTTCTCATAGACCAGGGGATAAGATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTCCTGGATTCTGCCAGTaGAAACCTGCCATGGTAACT +
Preference number: 5 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSPGFCQ*KPAMVT
Trigger: AGTTACCATGGCAGGTTTCAACTGGCAGAATCCAGG...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGAGGTCTCTTGCCAAATaGCAATACTGCACTGCAGGC +
Preference number: 5 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVRSLAK*QYCTAG
Trigger: GCCTGCAGTGCAGTATTGCAATTTGGCAAGAGACCT...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GCAACCACACAGCACGCAGGTAACATTATCCCGTGTGACCCACGCCCACAGGCATTTGATATTGTAATCTaGTCCTCATCTCCACAACTG +
Preference number: 5 (lower is better)
Translates to: ATTQHAGNIIPCDPRPQAFDIVI*SSSPQL
Trigger: CAGTTGTGGAGATGAGGACAAGATTACAATATCAAA...TGCCTGTGGGCGTGGGTCACACGGGATAATGTTACCTGCGTGCTGTGTGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp TGCCTACACACATTCCAGAACTATGACTTGGTCACACCCACTCCCAGGACCAGTGTAGACCTTATAGACTaGCTCCAACTCCTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: CLHTFQNYDLVTPTPRTSVDLID*LQLLLE
Trigger: TTCCAAGAGGAGTTGGAGCAAGTCTATAAGGTCTAC...ACTGGTCCTGGGAGTGGGTGTGACCAAGTCATAGTTCTGGAATGTGTGTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTTTGTACTCATTGATATaGGTGTTCACGTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLLYSLI*VFTSWR
Trigger: CCTCCAGGACGTGAACACCAATATCAATGAGTACAA...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp TCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTCCTGGAAGTCTTTTTGGTGTCCTTGTTTaGAAGGATGGCCACGATTTG +
Preference number: 5 (lower is better)
Translates to: SQEARGTLVNQTSTPGSLFGVLV*KDGHDL
Trigger: CAAATCGTGGCCATCCTTCAAAACAAGGACACCAAA...AAGACTTCCAGGAGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GAGACCTGGCAGAACAGGCTGTCCCCTTTCACACTGCCTTTAAAGCGCCTGTTTAGTTTCCTCTATGATTaGCATACCCCTTTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: ETWQNRLSPFTLPLKRLFSFLYD*HTPLFP
Trigger: AGGGAACAAAGGGGTATGCAAATCATAGAGGAAACT...AAACAGGCGCTTTAAAGGCAGTGTGAAAGGGGACAGCCTGTTCTGCCAGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GTGGGGCACGTCCTAGCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTTTGTTAAGATCACACTaGGTCACATTTTCCCATTTC +
Preference number: 5 (lower is better)
Translates to: VGHVLAYSSWPSLAPGLSLLRSH*VTFSHF
Trigger: GAAATGGGAAAATGTGACCAAGTGTGATCTTAACAA...AGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGCTAGGACGTGCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GTTCTCACTCCATCACAGGAGGCAAGGGGTACCCTTGTGAACCAGACTTCAACTACTTCCTTGCGCATCTaGTACTCATTGATATTGGTG +
Preference number: 5 (lower is better)
Translates to: VLTPSQEARGTLVNQTSTTSLRI*YSLILV
Trigger: CACCAATATCAATGAGTACAAGATGCGCAAGGAAGT...AGTTGAAGTCTGGTTCACAAGGGTACCCCTTGCCTCCTGTGATGGAGTGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp AGAATGGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCTACATAGAATGCAGTTCAAAGTCCAGTAGCTaGTCCAGACGCTTCTTGATC +
Preference number: 5 (lower is better)
Translates to: RMGWLTYQVKEAGYIECSSKSSS*SRRFLI
Trigger: GATCAAGAAGCGTCTGGACAAGCTACTGGACTTTGA...ACTGCATTCTATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GTCCCTAACCCTGGCTGCACATTGGAAGCACCTGGGAAGCTTTCTGAATTCCTGATAAAAGCTGACTCATaGGTTATGATGTCTCCTGAT +
Preference number: 5 (lower is better)
Translates to: VPNPGCTLEAPGKLSEFLIKADS*VMMSPD
Trigger: ATCAGGAGACATCATAACCAATGAGTCAGCTTTTAT...CAGGAATTCAGAAAGCTTCCCAGGTGCTTCCAATGTGCAGCCAGGGTTAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp TCCCAGAGTTTCCTCTATGATTTGCATACCCCTTTGTTCCCTAGTCCTGAGAACCATGGTTCTAGGCATTaGGAGAGGGAAAAGGCACAT +
Preference number: 5 (lower is better)
Translates to: SQSFLYDLHTPLFPSPENHGSRH*EREKAH
Trigger: ATGTGCCTTTTCCCTCTCCAAATGCCTAGAACCATG...GTTCTCAGGACTAGGGAACAAAGGGGTATGCAAATCATAGAGGAAACTCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 90 bp TTACCAACTAGCTGCACTTGTTCCTCTTCCTTGGAGGCTGTCTCCTaGAGATCATGGAGGAATCTGCTGTTCACTTTGATGATATCATCA +
Preference number: 5 (lower is better)
Translates to: LPTSCTCSSSLEAVS*RSWRNLLFTLMISS
Trigger: TGATGATATCATCAAAGTGAACAGCAGATTCCTCCATGATCTGCAGGAGACAGCCTCCAAGGAAGAGGAACAAGTGCAGCTAGTTGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 90 bp AGCTGCACTTGTTCCTCTTCCTTGGAGGCTGTCTCCTGCAGATCATaGAGGAATCTGCTGTTCACTTTGATGATATCATCAATGTTTGAG +
Preference number: 5 (lower is better)
Translates to: SCTCSSSLEAVSCRS*RNLLFTLMISSMFE
Trigger: CTCAAACATTGATGATATCATCAAAGTGAACAGCAGATTCCTCCATGATCTGCAGGAGACAGCCTCCAAGGAAGAGGAACAAGTGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000505810.5
CDS CCA 90 bp ATTCCAGAAATATGTTACCAACTAGCTGCACTTGTTCCTCTTCCTTaGAGGCTGTCTCCTGCAGATCATGGAGGAATCTGCTGTTCACTT +
Preference number: 5 (lower is better)
Translates to: IPEICYQLAALVPLP*RLSPADHGGICCSL
Trigger: AAGTGAACAGCAGATTCCTCCATGATCTGCAGGAGACAGCCTCCAAGGAAGAGGAACAAGTGCAGCTAGTTGGTAACATATTTCTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp AGAATGGGGTGGCTCACTTACCAAGTTAAAGAGGCTGGCTACATAGAATGCAGTCGCATCTTGTACTCATaGATATTGGTGTTCACGTCC +
Preference number: 5 (lower is better)
Translates to: RMGWLTYQVKEAGYIECSRILYS*ILVFTS
Trigger: GGACGTGAACACCAATATCAATGAGTACAAGATGCG...ACTGCATTCTATGTAGCCAGCCTCTTTAACTTGGTAAGTGAGCCACCCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp GCTTACAGCTCATGGCCATCTCTGGCACCAGGTCTATCTGTCCAATACTTTGTGTACAAACTTTGTCAGTaGTTAAGATCACACTTGGTC +
Preference number: 5 (lower is better)
Translates to: AYSSWPSLAPGLSVQYFVYKLCQ*LRSHLV
Trigger: GACCAAGTGTGATCTTAACAACTGACAAAGTTTGTA...CACAAAGTATTGGACAGATAGACCTGGTGCCAGAGATGGCCATGAGCTGTAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS-3UTR CAA 90 bp AGGGGCTCCAATTTCCAGGTTCTAGAATGGGGTGGCTCACTTACCAAGTTAAAGACAAGACATCCAATTTaGTTCAGGTCCCTTTTAATG +
Preference number: 5 (lower is better)
Translates to: RGSNFQVLEWGGSLTKLKTRHPI*FRSLLM
Trigger: CATTAAAAGGGACCTGAACAAAATTGGATGTCTTGT...CTTTAACTTGGTAAGTGAGCCACCCCATTCTAGAACCTGGAAATTGGAGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 72 bp TGGCCATGTCAGCAGGTTCCGCGCGCGCAAGGTGCCTaGCGGCGCTCACGCACGGAGGTCGGCCGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: WPCQQVPRAQGA*RRSRTEVGRPG
Trigger: GCCCGGGCGGCCGACCTCCGTGCGTGAGCGCCGGCAGGCACCTTGCGCGCGCGGAACCTGCTGACATGGCCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 72 bp TGCTTGGCCATGTCAGCAGGTTCCGCGCGCGCAAGGTaGCTGCCGGCGCTCACGCACGGAGGTCGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: CLAMSAGSARAR*LPALTHGGRPP
Trigger: GGGCGGCCGACCTCCGTGCGTGAGCGCCGGCAGGCACCTTGCGCGCGCGGAACCTGCTGACATGGCCAAGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 72 bp GGCACCACCGCCTCAACGATGCCCTGGATGTGCCGCTaGAGCTCCGGCTCCTTCCGGTACGTGTCCACCAGT +
Preference number: 6 (lower is better)
Translates to: GTTASTMPWMCR*SSGSFRYVSTS
Trigger: ACTGGTGGACACGTACCGGAAGGAGCCGGAGCTGCAGCGGCACATCCAGGGCATCGTTGAGGCGGTGGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CAA 72 bp CTCAGCCGGGTGGTCTTCTTGGAGAGGGTGTGTGTGTaGATGCGGGCCAGCCGCTCCCGGAGGGTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LSRVVFLERVCV*MRASRSRRVSC
Trigger: GCAGCTGACCCTCCGGGAGCGGCTGGCCCGCATCAACACACACACCCTCTCCAAGAAGACCACCCGGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS TCA 72 bp GTCCTCAGAGGCCCTACCTTCCCTGTCCGGACTCCCTaGCCTGGAGGATGGCTCGTCGGCTCCATGCTTGGC +
Preference number: 6 (lower is better)
Translates to: VLRGPTFPVRTP*PGGWLVGSMLG
Trigger: GCCAAGCATGGAGCCGACGAGCCATCCTCCAGGTCAGGGAGTCCGGACAGGGAAGGTAGGGCCTCTGAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000505810.5
CDS GCA 72 bp CTGAAGATCCAGCTTGCGGCACCACCGCCTCAACGATaGCCTGGATGTGCCGCTGCAGCTCCGGCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: LKIQLAAPPPQR*PGCAAAAPAPS
Trigger: GGAAGGAGCCGGAGCTGCAGCGGCACATCCAGGGCATCGTTGAGGCGGTGGTGCCGCAAGCTGGATCTTCAG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 72 bp TTCCCAGGGCCATACCTGCTCAGGAGAGCCTGCACCTaGCGTTCAGACCCTGGAAGGAGCGGCTGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: FPGPYLLRRACT*RSDPGRSGWER
Trigger: CCTCTCCCAGCCGCTCCTTCCAGGGTCTGAACGCCAGGTGCAGGCTCTCCTGAGCAGGTATGGCCCTGGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509831.1
CDS CAA 90 bp AGCAGCTGGCTCAGCCGGGTGGTCTTCTTGGAGAGGGTGTGTGTGTaGATGCGGGCCAGCCGCTCCCGGAGGGTCAGCTGCTCTACCTTG +
Preference number: 6 (lower is better)
Translates to: SSWLSRVVFLERVCV*MRASRSRRVSCSTL
Trigger: CAAGGTAGAGCAGCTGACCCTCCGGGAGCGGCTGGCCCGCATCAACACACACACCCTCTCCAAGAAGACCACCCGGCTGAGCCAGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 72 bp CTTGTCCTGGGCCTCCAGGATGGTCACAGGCTGGCCTaGCTGCAGGCTCACTTCATGGCTGCTTCTGGCCAC +
Preference number: 6 (lower is better)
Translates to: LVLGLQDGHRLA*LQAHFMAASGH
Trigger: GTGGCCAGAAGCAGCCATGAAGTGAGCCTGCAGGCAGGCCAGCCTGTGACCATCCTGGAGGCCCAGGACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 72 bp CAGAGGCCCTACCTTCCCTGTCCGGACTCCCTGACCTaGAGGATGGCTCGTCGGCTCCATGCTTGGCCATGT +
Preference number: 6 (lower is better)
Translates to: QRPYLPCPDSLT*RMARRLHAWPC
Trigger: ACATGGCCAAGCATGGAGCCGACGAGCCATCCTCCAGGTCAGGGAGTCCGGACAGGGAAGGTAGGGCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000505810.5
CDS CAA 72 bp CGGGCCAGCCGCTCCCGGAGGGTCAGCTGCTCTACCTaGGTGTACTTGGAGGCCACTTCCTTGCGCATCTTG +
Preference number: 6 (lower is better)
Translates to: RASRSRRVSCST*VYLEATSLRIL
Trigger: CAAGATGCGCAAGGAAGTGGCCTCCAAGTACACCAAGGTAGAGCAGCTGACCCTCCGGGAGCGGCTGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 72 bp GTGTTGATGCGGGCCAGCCGCTCCCGGAGGGTCAGCTaGTCTACCTTGGTGTACTTGGAGGCCACTTCCTTG +
Preference number: 6 (lower is better)
Translates to: VLMRASRSRRVS*STLVYLEATSL
Trigger: CAAGGAAGTGGCCTCCAAGTACACCAAGGTAGAGCAGCTGACCCTCCGGGAGCGGCTGGCCCGCATCAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 72 bp GGGCCAGCCGCTCCCGGAGGGTCAGCTGCTCTACCTTaGTGTACTTGGAGGCCACTTCCTTGCGCATCTTGT +
Preference number: 6 (lower is better)
Translates to: GPAAPGGSAALP*CTWRPLPCASC
Trigger: ACAAGATGCGCAAGGAAGTGGCCTCCAAGTACACCAAGGTAGAGCAGCTGACCCTCCGGGAGCGGCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 72 bp TTCCCAGGGCCATACCTGCTCAGGAGAGCCTGCACCTaGCGTTCAGACCCTGGAAGGAGCGGTTGTGTGGTG +
Preference number: 6 (lower is better)
Translates to: FPGPYLLRRACT*RSDPGRSGCVV
Trigger: CACCACACAACCGCTCCTTCCAGGGTCTGAACGCCAGGTGCAGGCTCTCCTGAGCAGGTATGGCCCTGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 72 bp GATGTCCCCCGGTGTCCACCAGCCAGCGGCCGCTGTTaGCTTTGGTGTCCTTGTTTTGAAGGATGGCCACGA +
Preference number: 6 (lower is better)
Translates to: DVPRCPPASGRC*LWCPCFEGWPR
Trigger: TCGTGGCCATCCTTCAAAACAAGGACACCAAAGGCAACAGCGGCCGCTGGCTGGTGGACACCGGGGGACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000509831.1
CDS CCA 72 bp CCCCGGTGTCCACCAGCCAGCGGCCGCTGTTGCCTTTaGTGTCCTTGTTTTGAAGGATGGCCACGATTTGGC +
Preference number: 6 (lower is better)
Translates to: PRCPPASGRCCL*CPCFEGWPRFG
Trigger: GCCAAATCGTGGCCATCCTTCAAAACAAGGACACCAAAGGCAACAGCGGCCGCTGGCTGGTGGACACCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000509831.1
CDS CAA 72 bp TGGTTAAACTGTGGGAGCTCAGCCACTAGCAGCGAGTaGAGTGCCTGGTATGTGTGCCGGGCGGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: WLNCGSSATSSE*SAWYVCRAASS
Trigger: GGAGGAGGCCGCCCGGCACACATACCAGGCACTCAACTCGCTGCTAGTGGCTGAGCTCCCACAGTTTAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 72 bp GGGCCAAGCAGGGCTTTGGCCAGGCTGCACAGTGGCTaGCACACCAGGCCTTCTAGCCGTTGCTTAAATTTC +
Preference number: 6 (lower is better)
Translates to: GPSRALARLHSG*HTRPSSRCLNF
Trigger: GAAATTTAAGCAACGGCTAGAAGGCCTGGTGTGGCAGCCACTGTGCAGCCTGGCCAAAGCCCTGCTTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 72 bp GCCTGCCTTCTGAGCTCCTCTGCACTGGGGACCACATaGTACAGCTGTAGTTTCCCAGCCGGCACATACCCA +
Preference number: 6 (lower is better)
Translates to: ACLLSSSALGTT*YSCSFPAGTYP
Trigger: TGGGTATGTGCCGGCTGGGAAACTACAGCTGTACCATGTGGTCCCCAGTGCAGAGGAGCTCAGAAGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000509831.1
CDS CCA 72 bp ATGGTCACAGGCTGGCCTGCCTGCAGGCTCACTTCATaGCTGCTTCTGGCCACAAAAGGGTACGCGGCTATG +
Preference number: 6 (lower is better)
Translates to: MVTGWPACRLTS*LLLATKGYAAM
Trigger: CATAGCCGCGTACCCTTTTGTGGCCAGAAGCAGCCATGAAGTGAGCCTGCAGGCAGGCCAGCCTGTGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CAA 90 bp GAGCGGTTGTGTGGTGGGAGGTGGCTGCACTTTCTCAAAGGTCTCTaGAAAGGAGCGAAGCTGGTTACTCGTCCGGCCCAGTGCGTCCTC +
Preference number: 6 (lower is better)
Translates to: ERLCGGRWLHFLKGL*KGAKLVTRPAQCVL
Trigger: GAGGACGCACTGGGCCGGACGAGTAACCAGCTTCGCTCCTTTCAAGAGACCTTTGAGAAAGTGCAGCCACCTCCCACCACACAACCGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 72 bp GTGCACATGATCTGGCCCAGCCACTGCATGACCAGCTaGTTAAACTGTGGGAGCTCAGCCACTAGCAGCGAG +
Preference number: 6 (lower is better)
Translates to: VHMIWPSHCMTS*LNCGSSATSSE
Trigger: CTCGCTGCTAGTGGCTGAGCTCCCACAGTTTAACCAGCTGGTCATGCAGTGGCTGGGCCAGATCATGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 72 bp GGCCGCTGTTGCCTTTGGTGTCCTTGTTTTGAAGGATaGCCACGATTTGGCCCCGAGGCAGAGTCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: GRCCLWCPCFEG*PRFGPEAESGP
Trigger: TGGACCTGACTCTGCCTCGGGGCCAAATCGTGGCCATCCTTCAAAACAAGGACACCAAAGGCAACAGCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000509831.1
CDS TCA 72 bp TCCAGTAGCTTGTCCAGACGCTTCTTGATCAGGTTCTaGGGGCCAAGCAGGGCTTTGGCCAGGCTGCACAGT +
Preference number: 6 (lower is better)
Translates to: SSSLSRRFLIRF*GPSRALARLHS
Trigger: ACTGTGCAGCCTGGCCAAAGCCCTGCTTGGCCCTCAGAACCTGATCAAGAAGCGTCTGGACAAGCTACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS TCA 72 bp CCCGCTCAAAGTCCAGTAGCTTGTCCAGACGCTTCTTaGTCAGGTTCTGAGGGCCAAGCAGGGCTTTGGCCA +
Preference number: 6 (lower is better)
Translates to: PAQSPVACPDAS*SGSEGQAGLWP
Trigger: TGGCCAAAGCCCTGCTTGGCCCTCAGAACCTGATCAAGAAGCGTCTGGACAAGCTACTGGACTTTGAGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS TCA 72 bp GTGGTGGGAGGTGGCTGCACTTTCTCAAAGGTCTCTTaGAAGGAGCGAAGCTGGTTACTCGTCCGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: VVGGGCTFSKVS*KERSWLLVRPS
Trigger: ACTGGGCCGGACGAGTAACCAGCTTCGCTCCTTTCAAGAGACCTTTGAGAAAGTGCAGCCACCTCCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 72 bp AGGGTCACGAATGTGCACATGATCTGGCCCAGCCACTaGATGACCAGCTGGTTAAACTGTGGGAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: RVTNVHMIWPSH*MTSWLNCGSSA
Trigger: GGCTGAGCTCCCACAGTTTAACCAGCTGGTCATGCAGTGGCTGGGCCAGATCATGTGCACATTCGTGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CAA 72 bp TGTGGTGGGAGGTGGCTGCACTTTCTCAAAGGTCTCTaGAAAGGAGCGAAGCTGGTTACTCGTCCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: CGGRWLHFLKGL*KGAKLVTRPAQ
Trigger: CTGGGCCGGACGAGTAACCAGCTTCGCTCCTTTCAAGAGACCTTTGAGAAAGTGCAGCCACCTCCCACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CAA 72 bp GCCTTTGGTGTCCTTGTTTTGAAGGATGGCCACGATTaGGCCCCGAGGCAGAGTCAGGTCCAGAGTCCCAGT +
Preference number: 6 (lower is better)
Translates to: AFGVLVLKDGHD*APRQSQVQSPS
Trigger: ACTGGGACTCTGGACCTGACTCTGCCTCGGGGCCAAATCGTGGCCATCCTTCAAAACAAGGACACCAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000509831.1
CDS TCA 72 bp GCCCCTCGGGGATGTCCAGATTGTATTCGTGCGGCCTaGAGTAGAGGAAAGCCTGCAGATTGTCCAGGTAAG +
Preference number: 6 (lower is better)
Translates to: APRGCPDCIRAA*SRGKPADCPGK
Trigger: CTTACCTGGACAATCTGCAGGCTTTCCTCTACTTCAGGCCGCACGAATACAATCTGGACATCCCCGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 72 bp TCAGGAAGGCCTCAAGGTGAAGGTCTCTTGCCAAATTaGAATACTGCACTGCAGGCCCCTCGGGGATGTCCA +
Preference number: 6 (lower is better)
Translates to: SGRPQGEGLLPN*NTALQAPRGCP
Trigger: TGGACATCCCCGAGGGGCCTGCAGTGCAGTATTGCAATTTGGCAAGAGACCTTCACCTTGAGGCCTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 72 bp GGGCAGAGACAGCCCTCTGAAGGACAGGATAGGCACTaGCATCAGGGACTGTGTTCTCCAGGATTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: GQRQPSEGQDRH*HQGLCSPGFSA
Trigger: TGCAGAAAATCCTGGAGAACACAGTCCCTGATGCCAGTGCCTATCCTGTCCTTCAGAGGGCTGTCTCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 72 bp AGGTCCCTCTGGAGGGTCACGAATGTGCACATGATCTaGCCCAGCCACTGCATGACCAGCTGGTTAAACTGT +
Preference number: 6 (lower is better)
Translates to: RSLWRVTNVHMI*PSHCMTSWLNC
Trigger: ACAGTTTAACCAGCTGGTCATGCAGTGGCTGGGCCAGATCATGTGCACATTCGTGACCCTCCAGAGGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 72 bp TTCAGACCCTGGAAGGAGCGGTTGTGTGGTGGGAGGTaGCTGCACTTTCTCAAAGGTCTCTTGAAAGGAGCG +
Preference number: 6 (lower is better)
Translates to: FRPWKERLCGGR*LHFLKGLLKGA
Trigger: CGCTCCTTTCAAGAGACCTTTGAGAAAGTGCAGCCACCTCCCACCACACAACCGCTCCTTCCAGGGTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 72 bp GGTACGTGTCCACCAGTAGCAAGGCCTGGTCGTAGCTaGCACAGTAGACCTTATAGACTTGCTCCAACTCCT +
Preference number: 6 (lower is better)
Translates to: GTCPPVARPGRS*HSRPYRLAPTP
Trigger: AGGAGTTGGAGCAAGTCTATAAGGTCTACTGTGCCAGCTACGACCAGGCCTTGCTACTGGTGGACACGTACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CAA 72 bp GAGGCCACTTCCTTGCGCATCTTGTACTCATTGATATaGGTGTTCACGTCCTGGAGGGCAGAGACAGCCCTC +
Preference number: 6 (lower is better)
Translates to: EATSLRILYSLI*VFTSWRAETAL
Trigger: GAGGGCTGTCTCTGCCCTCCAGGACGTGAACACCAATATCAATGAGTACAAGATGCGCAAGGAAGTGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS TCA 72 bp ACTTGGAGGCCACTTCCTTGCGCATCTTGTACTCATTaGTATTGGTGTTCACGTCCTGGAGGGCAGAGACAG +
Preference number: 6 (lower is better)
Translates to: TWRPLPCASCTH*YWCSRPGGQRQ
Trigger: CTGTCTCTGCCCTCCAGGACGTGAACACCAATATCAATGAGTACAAGATGCGCAAGGAAGTGGCCTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 72 bp AAGGTGAAGGTCTCTTGCCAAATTGCAATACTGCACTaGAGGCCCCTCGGGGATGTCCAGATTGTATTCGTG +
Preference number: 6 (lower is better)
Translates to: KVKVSCQIAILH*RPLGDVQIVFV
Trigger: CACGAATACAATCTGGACATCCCCGAGGGGCCTGCAGTGCAGTATTGCAATTTGGCAAGAGACCTTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS GCA 72 bp CTTAAATTTCAGGAAGGCCTCAAGGTGAAGGTCTCTTaGCAAATTGCAATACTGCACTGCAGGCCCCTCGGG +
Preference number: 6 (lower is better)
Translates to: LKFQEGLKVKVS*QIAILHCRPLG
Trigger: CCCGAGGGGCCTGCAGTGCAGTATTGCAATTTGGCAAGAGACCTTCACCTTGAGGCCTTCCTGAAATTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS TCA 72 bp ACCTGTCAAAGCTGGCACCAACATTTGCTCACATTTTaGCAGCCAGGAGTACTGGGCCTGATCCTAACTCTG +
Preference number: 6 (lower is better)
Translates to: TCQSWHQHLLTF*QPGVLGLILTL
Trigger: CAGAGTTAGGATCAGGCCCAGTACTCCTGGCTGTCAAAATGTGAGCAAATGTTGGTGCCAGCTTTGACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509831.1
CDS GCA 72 bp AGCTGCACTTGTTCCTCTTCCTTGGAGGCTGTCTCCTaGAGATCATGGAGGAATCTGCTGTTCACTTTGATG +
Preference number: 6 (lower is better)
Translates to: SCTCSSSLEAVS*RSWRNLLFTLM
Trigger: CATCAAAGTGAACAGCAGATTCCTCCATGATCTGCAGGAGACAGCCTCCAAGGAAGAGGAACAAGTGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000505810.5
CDS CAA 72 bp TACTTGGAGGCCACTTCCTTGCGCATCTTGTACTCATaGATATTGGTGTTCACGTCCTGGAGGGCAGAGACA +
Preference number: 6 (lower is better)
Translates to: YLEATSLRILYS*ILVFTSWRAET
Trigger: TGTCTCTGCCCTCCAGGACGTGAACACCAATATCAATGAGTACAAGATGCGCAAGGAAGTGGCCTCCAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CAA 72 bp ACCTTGGTGTACTTGGAGGCCACTTCCTTGCGCATCTaGTACTCATTGATATTGGTGTTCACGTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: TLVYLEATSLRI*YSLILVFTSWR
Trigger: CCTCCAGGACGTGAACACCAATATCAATGAGTACAAGATGCGCAAGGAAGTGGCCTCCAAGTACACCAAGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CAA 90 bp TTGGAGGCTGTCTCCTGCAGATCATGGAGGAATCTGCTGTTCACTTaGATGATATCATCAATGTTTGAGAACAGGACATCCAGATCTCCC +
Preference number: 6 (lower is better)
Translates to: LEAVSCRSWRNLLFT*MISSMFENRTSRSP
Trigger: GGGAGATCTGGATGTCCTGTTCTCAAACATTGATGATATCATCAAAGTGAACAGCAGATTCCTCCATGATCTGCAGGAGACAGCCTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000505810.5
CDS CAA 90 bp AATTCCAGAAATATGTTACCAACTAGCTGCACTTGTTCCTCTTCCTaGGAGGCTGTCTCCTGCAGATCATGGAGGAATCTGCTGTTCACT +
Preference number: 6 (lower is better)
Translates to: NSRNMLPTSCTCSSS*EAVSCRSWRNLLFT
Trigger: AGTGAACAGCAGATTCCTCCATGATCTGCAGGAGACAGCCTCCAAGGAAGAGGAACAAGTGCAGCTAGTTGGTAACATATTTCTGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS TCA 72 bp TCTAGCCGTTGCTTAAATTTCAGGAAGGCCTCAAGGTaGAGGTCTCTTGCCAAATTGCAATACTGCACTGCA +
Preference number: 6 (lower is better)
Translates to: SSRCLNFRKASR*RSLAKLQYCTA
Trigger: TGCAGTGCAGTATTGCAATTTGGCAAGAGACCTTCACCTTGAGGCCTTCCTGAAATTTAAGCAACGGCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333677.7
CDS CCA 72 bp TGTTCCTCTTCCTTGGAGGCTGTCTCCTGCAGATCATaGAGGAATCTGCTGTTCACTTTGATGATATCATCA +
Preference number: 6 (lower is better)
Translates to: CSSSLEAVSCRS*RNLLFTLMISS
Trigger: TGATGATATCATCAAAGTGAACAGCAGATTCCTCCATGATCTGCAGGAGACAGCCTCCAAGGAAGAGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000505810.5
CDS TCA 72 bp GAATCTGCTGTTCACTTTGATGATATCATCAATGTTTaGGAACAGGACATCCAGATCTCCCTGCGGCAACTG +
Preference number: 6 (lower is better)
Translates to: ESAVHFDDIINV*EQDIQISLRQL
Trigger: CAGTTGCCGCAGGGAGATCTGGATGTCCTGTTCTCAAACATTGATGATATCATCAAAGTGAACAGCAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000505810.5
CDS CAA 72 bp GTCTCCTGCAGATCATGGAGGAATCTGCTGTTCACTTaGATGATATCATCAATGTTTGAGAACAGGACATCC +
Preference number: 6 (lower is better)
Translates to: VSCRSWRNLLFT*MISSMFENRTS
Trigger: GGATGTCCTGTTCTCAAACATTGATGATATCATCAAAGTGAACAGCAGATTCCTCCATGATCTGCAGGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333677.7
ENST00000505810.5