Pregenerated sensors for ARHGEF35 (Homo sapiens)
Ensembl gene IDs: ENSG00000213214Ensembl transcript IDs: ENST00000378115.3
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCGCCACAACAAATTTAAAAGAGATAGTAATCATCCAGAGCAGATaGAAACCAGAAATCATTGTAGGGAATCCAATTGGAAATCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: LATTNLKEIVIIQSR*KPEIIVGNPIGNQH Trigger: ATGCTGATTTCCAATTGGATTCCCTACAATGATTTCTGGTTTTCATCTGCTCTGGATGATTACTATCTCTTTTAAATTTGTTGTGGCGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378115.3 |
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| 3UTR-3UTR TCA 90 bp | TCAATAATTGATAGAACTAGACAGAAAATCAGCAAGGAGTGTTGGCTTTGGCAGATCATCCAGAGCAGATaGAAACCAGAAATCATTGTA | + |
|
Preference number: 2 (lower is better) Translates to: SIIDRTRQKISKECWLWQIIQSR*KPEIIV Trigger: TACAATGATTTCTGGTTTTCATCTGCTCTGGATGAT...CTGCCAAAGCCAACACTCCTTGCTGATTTTCTGTCTAGTTCTATCAATTATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378115.3 |
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| CDS-3UTR TCA 90 bp | TCAATAATTGATAGAACTAGACAGAAAATCAGCAAGGAGTGTTGGCTTTGGCAGAGCCTCCATCAGGGCTaGATCCTGGTCGGTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SIIDRTRQKISKECWLWQSLHQG*ILVGVT Trigger: TGTGACACCGACCAGGATTCAGCCCTGATGGAGGCT...CTGCCAAAGCCAACACTCCTTGCTGATTTTCTGTCTAGTTCTATCAATTATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378115.3 |
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| CDS-3UTR CCA 90 bp | TCAATAATTGATAGAACTAGACAGAAAATCAGCAAGGAGTGTTGGCTTTGGCAGATCAGCAAGGAGTGTTaGCTTTGGCAGCACTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: SIIDRTRQKISKECWLWQISKEC*LWQHFL Trigger: TAGAAAGTGCTGCCAAAGCCAACACTCCTTGCTGAT...CTGCCAAAGCCAACACTCCTTGCTGATTTTCTGTCTAGTTCTATCAATTATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378115.3 |
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| CDS-3UTR CAA 90 bp | TCAATAATTGATAGAACTAGACAGAAAATCAGCAAGGAGTGTTGGCTTTGGCAGAATCAGCAAGGAGTGTaGGCTTTGGCAGCACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIIDRTRQKISKECWLWQNQQGV*ALAALS Trigger: AGAAAGTGCTGCCAAAGCCAACACTCCTTGCTGATT...CTGCCAAAGCCAACACTCCTTGCTGATTTTCTGTCTAGTTCTATCAATTATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378115.3 |
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| CDS-3UTR CAA 90 bp | TCAATAATTGATAGAACTAGACAGAAAATCAGCAAGGAGTGTTGGCTTTGGCAGCCCAAGCATCACATCTaGTACCTGTTCCTGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SIIDRTRQKISKECWLWQPKHHI*YLFLFL Trigger: CAAAAACAGGAACAGGTACAAGATGTGATGCTTGGG...CTGCCAAAGCCAACACTCCTTGCTGATTTTCTGTCTAGTTCTATCAATTATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378115.3 |
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