RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF33 (Homo sapiens)

Ensembl gene IDs: ENSG00000214694

Ensembl transcript IDs: ENST00000398800.8, ENST00000409978.7, ENST00000411874.6, ENST00000430382.1, ENST00000433605.2, ENST00000483305.1, ENST00000486958.5, ENST00000488692.1

Found 463 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCTGTTCCTTGGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTaGAGAAATCTTGTTTGGTGGGTGAAGGATCCATTGAGGGATTCT +
Preference number: 1 (lower is better)
Translates to: QLFLGQGHLQEQVGF*RNLVWWVKDPLRDS
Trigger: AGAATCCCTCAATGGATCCTTCACCCACCAAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAGGAACAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411874.6
3UTR GCA 90 bp GGAAACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTaGAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTACAA +
Preference number: 1 (lower is better)
Translates to: GNRAHFITPEPGRPR*NLIPLSFKSLVSLQ
Trigger: TTGTAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR TCA 90 bp AGAGACCAAAGCCAATCAATAGTCAACAACTCAGATCAGTCCATTTaGGTCCCCAGTCGAGGGTGCATTCTTCCTTTATCTTGCTTAAGC +
Preference number: 1 (lower is better)
Translates to: RDQSQSIVNNSDQSI*VPSRGCILPLSCLS
Trigger: GCTTAAGCAAGATAAAGGAAGAATGCACCCTCGACTGGGGACTCAAATGGACTGATCTGAGTTGTTGACTATTGATTGGCTTTGGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433605.2
3UTR CCA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTaGGTCTTGAATACTGAGTACTCAATAAAACACAGACTGGACTGT +
Preference number: 1 (lower is better)
Translates to: LVHLVVSVCDTQDHE*VLNTEYSIKHRLDC
Trigger: ACAGTCCAGTCTGTGTTTTATTGAGTACTCAGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR TCA 90 bp GATCCTTTATGTGTTCCAGACAACTACTATTCAAAACGCAGTAGGTaGGTTCCTAATTTGTCATCAGACAAGGAGAAGAAAACTTGCAAC +
Preference number: 1 (lower is better)
Translates to: DPLCVPDNYYSKRSR*VPNLSSDKEKKTCN
Trigger: GTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTGGAACACATAAAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR TCA 90 bp AATTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTaGACCTTTGCCTATTTTATCAACAAACGCTTCAATAGAGGAACA +
Preference number: 1 (lower is better)
Translates to: NLSSDKEKKTCNTYM*TFAYFINKRFNRGT
Trigger: TGTTCCTCTATTGAAGCGTTTGTTGATAAAATAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR GCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGACCAGGCAGGCCTCGTTaGAATCTGATTCCTCTAAGC +
Preference number: 2 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRPGRPR*NLIPLS
Trigger: GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGG...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR CAA 90 bp GTCCCCAGTCGAGGGTGCATTCTTCCTTTATCTTGCTTAAGCCACTaGGGTAATCCATTCCAGCTCTGCACCTTCTCCAGTTTTCTCATG +
Preference number: 2 (lower is better)
Translates to: VPSRGCILPLSCLSH*GNPFQLCTFSSFLM
Trigger: CATGAGAAAACTGGAGAAGGTGCAGAGCTGGAATGGATTACCCAAGTGGCTTAAGCAAGATAAAGGAAGAATGCACCCTCGACTGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433605.2
3UTR-3UTR CCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGACTCAAGATCACGAGTaGGTCTTGAATACTGAGTAC +
Preference number: 2 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKTQDHE*VLNTEY
Trigger: GTACTCAGTATTCAAGACCCACTCGTGATCTTGAGT...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR TCA 90 bp CATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCCCTGAATTTTCACTTTaGCCTGCTGTTTGTAGCAAC +
Preference number: 2 (lower is better)
Translates to: HFITPEPGRPRCNLIPLSPEFSL*PAVCSN
Trigger: GTTGCTACAAACAGCAGGTCAAAGTGAAAATTCAGG...GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR GCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAAAGTTTTGGTGCTATTaGCACCTTCTTTTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRKFWCY*HLLFRL
Trigger: CAGCCTGAAAAGAAGGTGGCAATAGCACCAAAACTT...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR TCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGATTATACTCGGGGAATaGCTTCAAGTTGGAAGTTTT +
Preference number: 2 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKIILGE*LQVGSF
Trigger: AAAACTTCCAACTTGAAGTCATTCCCCGAGTATAAT...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR TCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGTGCAACACTTACATGTaGACCTTTGCCTATTTTATC +
Preference number: 2 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKCNTYM*TFAYFI
Trigger: GATAAAATAGGCAAAGGTTCACATGTAAGTGTTGCA...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR TCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGATCAAAACGCAGTAGGTaGGTTCCTAATTTGTCATCA +
Preference number: 2 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRSKRSR*VPNLSS
Trigger: TGATGACAAATTAGGAACTCACCTACTGCGTTTTGA...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR GCA 90 bp CATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCCCATTGAAGTTTTGGTaGTATTGCCACCTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: HFITPEPGRPRCNLIPLSPLKFW*YCHLLF
Trigger: GAAAAGAAGGTGGCAATAGCACCAAAACTTCAATGG...GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR CCA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTACTCAAGATCACGAGTaGGTCTTGAATACTGAGTAC +
Preference number: 2 (lower is better)
Translates to: NRAHFITPEPGRPRCNLITQDHE*VLNTEY
Trigger: GTACTCAGTATTCAAGACCCACTCGTGATCTTGAGT...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR TCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAATTATACTCGGGGAATaGCTTCAAGTTGGAAGTTTT +
Preference number: 2 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRIILGE*LQVGSF
Trigger: AAAACTTCCAACTTGAAGTCATTCCCCGAGTATAAT...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR GCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTACCAGGCAGGCCTCGTTaGAATCTGATTCCTCTAAGC +
Preference number: 2 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLPGRPR*NLIPLS
Trigger: GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGG...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR CCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGATATAAATCTGATGTTTaGGGCATATCAAGGATGCTG +
Preference number: 2 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRYKSDV*GISRML
Trigger: CAGCATCCTTGATATGCCCCAAACATCAGATTTATA...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR CAA 90 bp TTTCACTTTGACCTGCTGTTTGTAGCAACTGCTGTGTGTGAGCCATaGAAGTTTTGGTGCTATTGCCACCTTCTTTTCAGGCTGCAGAAA +
Preference number: 2 (lower is better)
Translates to: FHFDLLFVATAVCEP*KFWCYCHLLFRLQK
Trigger: TTTCTGCAGCCTGAAAAGAAGGTGGCAATAGCACCAAAACTTCAATGGCTCACACACAGCAGTTGCTACAAACAGCAGGTCAAAGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR GCA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAGGGATGTTAGATATTaGCTTAGGGTTTTTGGAAGA +
Preference number: 2 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLRDVRY*LRVFGR
Trigger: TCTTCCAAAAACCCTAAGGCAATATCTAACATCCCT...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR CAA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTaGAATACTGAGTACTCAATAAAACACAGACTGGACTGTTTCCAT +
Preference number: 2 (lower is better)
Translates to: HLVVSVCDTQDHEWV*NTEYSIKHRLDCFH
Trigger: ATGGAAACAGTCCAGTCTGTGTTTTATTGAGTACTCAGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR CAA 90 bp CCAGGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTaGGTTTCTTTACAAAATAGGAAAACAGTCAAGTGCTGCAATCCT +
Preference number: 2 (lower is better)
Translates to: PGRPRCNLIPLSFKS*VSLQNRKTVKCCNP
Trigger: AGGATTGCAGCACTTGACTGTTTTCCTATTTTGTAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR CAA 90 bp AAGAGACCAAAGCCAATCAATAGTCAACAACTCAGATCAGTCCATTaGAGTCCCCAGTCGAGGGTGCATTCTTCCTTTATCTTGCTTAAG +
Preference number: 2 (lower is better)
Translates to: KRPKPINSQQLRSVH*SPQSRVHSSFILLK
Trigger: CTTAAGCAAGATAAAGGAAGAATGCACCCTCGACTGGGGACTCAAATGGACTGATCTGAGTTGTTGACTATTGATTGGCTTTGGTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433605.2
3UTR-3UTR TCA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCGGTTGTGAGTGTGTGTaGCACTCAAGATCACGAGTG +
Preference number: 2 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCGCECV*HSRSRV
Trigger: CACTCGTGATCTTGAGTGTCACACACACTCACAACC...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR TCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTAAGCAACTGCTGTGTGTaGGCCATTGAAGTTTTGGTG +
Preference number: 2 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLSNCCV*AIEVLV
Trigger: CACCAAAACTTCAATGGCTCACACACAGCAGTTGCT...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR GCA 90 bp AATCTCAACCACCACAAAAGAGACCAAAGCCAATCAATAGTCAACAACTCAGATGTCCCCAGTCGAGGGTaGATTCTTCCTTTATCTTGC +
Preference number: 2 (lower is better)
Translates to: NLNHHKRDQSQSIVNNSDVPSRG*ILPLSC
Trigger: GCAAGATAAAGGAAGAATGCACCCTCGACTGGGGAC...ATCTGAGTTGTTGACTATTGATTGGCTTTGGTCTCTTTTGTGGTGGTTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433605.2
3UTR-3UTR TCA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACAAGCAACTGCTGTGTGTaGGCCATTGAAGTTTTGGTG +
Preference number: 2 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTSNCCV*AIEVLV
Trigger: CACCAAAACTTCAATGGCTCACACACAGCAGTTGCT...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR TCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTACAAGTGCTGCAATCCTaGATTTTCACTTTGACCTGC +
Preference number: 2 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLQVLQS*IFTLTC
Trigger: GCAGGTCAAAGTGAAAATTCAGGATTGCAGCACTTG...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR TCA 90 bp GTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCTTGTTTGGTGGGTTTTTCCCTGTATTCTaGTCCACTGGACCTAAAATC +
Preference number: 2 (lower is better)
Translates to: VKVICKSKSVSEEILFGGFFPVF*STGPKI
Trigger: GATTTTAGGTCCAGTGGATCAGAATACAGGGAAAAA...CCCACCAAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411874.6
3UTR-3UTR TCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTACCTGAATTTTCACTTTaGCCTGCTGTTTGTAGCAAC +
Preference number: 2 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLPEFSL*PAVCSN
Trigger: GTTGCTACAAACAGCAGGTCAAAGTGAAAATTCAGG...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR TCA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACAGCATATCAAGGATGCTaGCCATCTTGCACATATCCA +
Preference number: 2 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTAYQGC*PSCTYP
Trigger: TGGATATGTGCAAGATGGTCAGCATCCTTGATATGC...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR CAA 90 bp CATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTaGCCTATTTTATCAACAAACGCTTCAATAGAGGAACAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: HQTRRRKLATLTCEP*PILSTNASIEEQLL
Trigger: CAGAAGCTGTTCCTCTATTGAAGCGTTTGTTGATAAAATAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR TCA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCGTGGGTCTTGAATACTaGGTACTCAATAAAACACAG +
Preference number: 2 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCVGLEY*VLNKTQ
Trigger: CTGTGTTTTATTGAGTACTCAGTATTCAAGACCCAC...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR GCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTATTTACTATACCGAACTaGCTGGGAATAAAGACAAAT +
Preference number: 2 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLFTIPN*LGIKTN
Trigger: ATTTGTCTTTATTCCCAGGCAGTTCGGTATAGTAAA...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR TCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGGTGGGTCTTGAATACTaGGTACTCAATAAAACACAG +
Preference number: 2 (lower is better)
Translates to: FFYYKSDVWGISRMLTILVGLEY*VLNKTQ
Trigger: CTGTGTTTTATTGAGTACTCAGTATTCAAGACCCAC...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR CAA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGGAAGTTTTGGTGCTATaGCCACCTTCTTTTCAGGCT +
Preference number: 3 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKEVLVL*PPSFQA
Trigger: AGCCTGAAAAGAAGGTGGCAATAGCACCAAAACTTC...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR GCA 72 bp GCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTaGAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTT +
Preference number: 3 (lower is better)
Translates to: AHFITPEPGRPR*NLIPLSFKSLV
Trigger: AACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR CAA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGTCTGAAGACACCAGTTaGAGTACCAAGATTTTGAAT +
Preference number: 3 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKSEDTS*STKILN
Trigger: ATTCAAAATCTTGGTACTCAAACTGGTGTCTTCAGA...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR GCA 72 bp GTAGCAACTGCTGTGTGTGAGCCATTGAAGTTTTGGTaGTATTGCCACCTTCTTTTCAGGCTGCAGAAAGTC +
Preference number: 3 (lower is better)
Translates to: VATAVCEPLKFW*YCHLLFRLQKV
Trigger: GACTTTCTGCAGCCTGAAAAGAAGGTGGCAATAGCACCAAAACTTCAATGGCTCACACACAGCAGTTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR GCA 72 bp TTCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTaGAAGCACTGCCGGCCACATAATAAGAGAAAAATC +
Preference number: 3 (lower is better)
Translates to: FTFHVQSIWRCA*KHCRPHNKRKI
Trigger: GATTTTTCTCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR CAA 90 bp CAACCACCACAAAAGAGACCAAAGCCAATCAATAGTCAACAACTCAGATCAGTCTCTTGCTTAAGCCACTaGGGTAATCCATTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: QPPQKRPKPINSQQLRSVSCLSH*GNPFQL
Trigger: GAGCTGGAATGGATTACCCAAGTGGCTTAAGCAAGA...GACTGATCTGAGTTGTTGACTATTGATTGGCTTTGGTCTCTTTTGTGGTGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433605.2
3UTR TCA 72 bp CTTGGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTaGAGAAATCTTGTTTGGTGGGTGAAGGATCCATTG +
Preference number: 3 (lower is better)
Translates to: LGQGHLQEQVGF*RNLVWWVKDPL
Trigger: CAATGGATCCTTCACCCACCAAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411874.6
3UTR TCA 72 bp AGCCAATCAATAGTCAACAACTCAGATCAGTCCATTTaGGTCCCCAGTCGAGGGTGCATTCTTCCTTTATCT +
Preference number: 3 (lower is better)
Translates to: SQSIVNNSDQSI*VPSRGCILPLS
Trigger: AGATAAAGGAAGAATGCACCCTCGACTGGGGACTCAAATGGACTGATCTGAGTTGTTGACTATTGATTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433605.2
3UTR-3UTR CAA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTAGATCACGAGTGGGTCTaGAATACTGAGTACTCAATA +
Preference number: 3 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLDHEWV*NTEYSI
Trigger: TATTGAGTACTCAGTATTCAAGACCCACTCGTGATC...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR CCA 72 bp CTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTaGGTCTTGAATACTGAGTACTCAATAAAACACAGA +
Preference number: 3 (lower is better)
Translates to: LVVSVCDTQDHE*VLNTEYSIKHR
Trigger: TCTGTGTTTTATTGAGTACTCAGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR CAA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTATTGCCTTAGGGTTTTaGGAAGACATGAAGCAAGAC +
Preference number: 3 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIIALGF*EDMKQD
Trigger: GTCTTGCTTCATGTCTTCCAAAAACCCTAAGGCAAT...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR CAA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCGAAGTTTTGGTGCTATaGCCACCTTCTTTTCAGGCT +
Preference number: 3 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCEVLVL*PPSFQA
Trigger: AGCCTGAAAAGAAGGTGGCAATAGCACCAAAACTTC...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR CAA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACAAGGATGCTGACCATCTaGCACATATCCATGTGGAAA +
Preference number: 3 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTRMLTI*HISMWK
Trigger: TTTCCACATGGATATGTGCAAGATGGTCAGCATCCT...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR-3UTR CAA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGGCTGTGTGTGAGCCATaGAAGTTTTGGTGCTATTGC +
Preference number: 3 (lower is better)
Translates to: FFYYKSDVWGISRMLTILAVCEP*KFWCYC
Trigger: GCAATAGCACCAAAACTTCAATGGCTCACACACAGC...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR TCA 72 bp TGTGTTCCAGACAACTACTATTCAAAACGCAGTAGGTaGGTTCCTAATTTGTCATCAGACAAGGAGAAGAAA +
Preference number: 3 (lower is better)
Translates to: CVPDNYYSKRSR*VPNLSSDKEKK
Trigger: TTTCTTCTCCTTGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTGGAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR GCA 72 bp TATGTTTTACACAGCTGTTCCTTGGTCAAGGTCATTTaGAAGAGCAAGTCGGTTTCTGAAGAAATCTTGTTT +
Preference number: 3 (lower is better)
Translates to: YVLHSCSLVKVI*KSKSVSEEILF
Trigger: AAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAGGAACAGCTGTGTAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411874.6
3UTR CCA 72 bp AATACAACTTTAAGTATGTTTTACACAGCTGTTCCTTaGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTG +
Preference number: 3 (lower is better)
Translates to: NTTLSMFYTAVP*SRSFARASRFL
Trigger: CAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAGGAACAGCTGTGTAAAACATACTTAAAGTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411874.6
3UTR TCA 72 bp TCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTaGACCTTTGCCTATTTTATCAACAAACGCTTCAAT +
Preference number: 3 (lower is better)
Translates to: SDKEKKTCNTYM*TFAYFINKRFN
Trigger: ATTGAAGCGTTTGTTGATAAAATAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACCGCGGCCGCCGCTGCTaGTGCGCGTGCTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHRGRRC*CACCRG
Trigger: GCCTCTACAGCACGCGCAGCAGCAGCGGCGGCCGCG...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACCGTGCTGTAGAGGCGTaGGGCCACGCCGTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHRAVEA*GHAVGW
Trigger: CCAGCCGACGGCGTGGCCCCACGCCTCTACAGCACG...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGCCAGTTTGTAGGCGCTaGTGCTGCCCGCCGGCGACG +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKPVCRR*CCPPAT
Trigger: CGTCGCCGGCGGGCAGCAGCAGCGCCTACAAACTGG...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAGCGCCTTCACGTCCTaGTCGGCCGCGCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKSAFTS*SAAQNC
Trigger: GCAGTTCTGCGCGGCCGAGCAGGACGTGAAGGCGCT...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTGCCTTGCCGTGCGCCTaGGCCGCCGCCTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: NRAHFITPEPGRPRCNLIALPCA*AAASSL
Trigger: CAAACTGGAGGCGGCGGCGCAGGCGCACGGCAAGGC...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCAGTCCATCTCCGGGATaGCCTGCAGGGGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: HFITPEPGRPRCNLIPLSSPSPG*PAGARP
Trigger: TGGCCGGGCCCCTGCAGGCCATCCCGGAGATGGACT...GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACGTGGGGGAAGCATCTTaGCCAGCATTGGCACACTGG +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHVGEAS*PALAHW
Trigger: CCAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCAC...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCTCTCGGGCCGCTCGTaGTTCCTGCCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NRAHFITPEPGRPRCNLILSGRS*FLPSSS
Trigger: GGAGCTGGAGGGCAGGAAGCACGAGCGGCCCGAGAG...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAAGCGCCTTCACGTCCTaGTCGGCCGCGCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRSAFTS*SAAQNC
Trigger: GCAGTTCTGCGCGGCCGAGCAGGACGTGAAGGCGCT...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTATCTCCGGGATGGCCTaGAGGGGCCCGGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTISGMA*RGPASA
Trigger: GGCGCTGGCCGGGCCCCTGCAGGCCATCCCGGAGAT...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACGTCGATTTGGCGTTGTaGTTGCAAGCACTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHVDLAL*LQALPA
Trigger: GGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGAC...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAGCAGATGTCCAGGCTaGACTCGGAGGAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKSRCPG*TRRRQA
Trigger: CGCCTGCCTCCTCCGAGTCCAGCCTGGACATCTGCT...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CAACTCAGATCAGTCCATTTGAGTCCCCAGTCGAGGGTGCATTCTTCCTTTATCGGGGGAAGAAGGTCCTaGATGCGCCGCGGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: QLRSVHLSPQSRVHSSFIGGRRS*MRRGRR
Trigger: TCGCCGCCCGCGGCGCATCCAGGACCTTCTTCCCCC...GATAAAGGAAGAATGCACCCTCGACTGGGGACTCAAATGGACTGATCTGAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR TCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACCCTGGCCAGCCTCCTTaGGTTTATCTGGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHPGQPP*VYLGGL
Trigger: AAGACCACCCAGATAAACTCAAGGAGGCTGGCCAGG...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCCACGCGGGAACTCTTTaGGAGAGCGGCTCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: HFITPEPGRPRCNLIPLSHAGTL*ESGSAA
Trigger: AGCCGCTGAGCCGCTCTCTCAAAGAGTTCCCGCGTG...GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGCTGGGCTTCCCGGGCTaGATGCTCTCCATCAGGCTT +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKLGFPG*MLSIRL
Trigger: AAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAG...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGGCCGCTCGTGCTTCCTaGCCTCCAGCTCCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLAARAS*PPAPSH
Trigger: GTGACTGGGAGCTGGAGGGCAGGAAGCACGAGCGGC...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTAATCTCCGGGATGGCCTaGAGGGGCCCGGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLISGMA*RGPASA
Trigger: GGCGCTGGCCGGGCCCCTGCAGGCCATCCCGGAGAT...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp ATTGTGACTTCTGTAGTATTTCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTCAGCGGCTTGGCCTTaGCGTGCGCCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: IVTSVVFHFPRPVDLALCSAAWP*RAPAPP
Trigger: CGGCGGCGCAGGCGCACGGCAAGGCCAAGCCGCTGA...GCACAACGCCAAATCGACTGGACGTGGAAAGTGAAATACTACAGAAGTCACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp ATTGTGACTTCTGTAGTATTTCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCCGCGGCCGCCGCTGCTaGTGCGCGTGCTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: IVTSVVFHFPRPVDLALCRGRRC*CACCRG
Trigger: GCCTCTACAGCACGCGCAGCAGCAGCGGCGGCCGCG...GCACAACGCCAAATCGACTGGACGTGGAAAGTGAAATACTACAGAAGTCACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAAAAGGACTTCCTTGTaGTTGGGCAGGCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKKRTSL*LGRPGL
Trigger: CAGGCCGGGCCTGCCCAAGCACAAGGAAGTCCTTTT...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACTTACCATCCTTAGGCTaGCTCCACATGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHLPSLG*LHMPDG
Trigger: CCCATCTGGCATGTGGAGGCAGCCTAAGGATGGTAA...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACAGCAGATCCAGGTGCTaGTGGACGAGGTACCGTAAA +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHSRSRC*WTRYRK
Trigger: TTTACGGTACCTCGTCCAGCAGCACCTGGATCTGCT...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTGGGAGCGCTCCACGTTaGCCAGCGGCTCCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIGSAPR*PAAPPE
Trigger: CTCCGGCGGAGCCGCTGGGCAACGTGGAGCGCTCCC...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp ATTGTGACTTCTGTAGTATTTCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCGCCTTGCCGTGCGCCTaGGCCGCCGCCTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: IVTSVVFHFPRPVDLALCALPCA*AAASSL
Trigger: CAAACTGGAGGCGGCGGCGCAGGCGCACGGCAAGGC...GCACAACGCCAAATCGACTGGACGTGGAAAGTGAAATACTACAGAAGTCACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTAGAAGAAGGTCCTGGATaGGCCGCGGGCGGCGACGGC +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLEEGPG*AAGGDG
Trigger: GCCGTCGCCGCCCGCGGCGCATCCAGGACCTTCTTC...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp ATTGTGACTTCTGTAGTATTTCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCGAAGAAGGTCCTGGATaGGCCGCGGGCGGCGACGGC +
Preference number: 4 (lower is better)
Translates to: IVTSVVFHFPRPVDLALCEEGPG*AAGGDG
Trigger: GCCGTCGCCGCCCGCGGCGCATCCAGGACCTTCTTC...GCACAACGCCAAATCGACTGGACGTGGAAAGTGAAATACTACAGAAGTCACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TGCATTCTTCCTTTATCTTGCTTAAGCCACTTGGGTAATCCATTCCAGCTCTGCGAAGAAGGTCCTGGATaGGCCGCGGGCGGCGACGGC +
Preference number: 4 (lower is better)
Translates to: CILPLSCLSHLGNPFQLCEEGPG*AAGGDG
Trigger: GCCGTCGCCGCCCGCGGCGCATCCAGGACCTTCTTC...GCAGAGCTGGAATGGATTACCCAAGTGGCTTAAGCAAGATAAAGGAAGAATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR GCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACCCAGGCAGGCCTCGTTaGAATCTGATTCCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHPGRPR*NLIPLS
Trigger: GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGG...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGGGACTTCCTTGTGCTTaGGCAGGCCCGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLGLPCA*AGPACE
Trigger: CTCACAGGCCGGGCCTGCCCAAGCACAAGGAAGTCC...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATGGGAGATGGCCCTTaGACTGGATATCAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHMGDGP*TGYQPR
Trigger: TCTCGGCTGATATCCAGTCCAAGGGCCATCTCCCAT...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACAGATCCAGGTGCTGCTaGACGAGGTACCGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHRSRCC*TRYRKE
Trigger: CTCTTTACGGTACCTCGTCCAGCAGCACCTGGATCT...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGTCTCCAAGAACGCCTTaGCGTGGCCACTTCAGGACC +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKSPRTP*RGHFRT
Trigger: GGTCCTGAAGTGGCCACGCCAAGGCGTTCTTGGAGA...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGACCTCAGGACCTGCAGTaGGGGAAGCATCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRPQDLQ*GKHLAQ
Trigger: CTGGGCAAGATGCTTCCCCCACTGCAGGTCCTGAGG...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTAGTCCATCTCCGGGATaGCCTGCAGGGGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTSPSPG*PAGARP
Trigger: TGGCCGGGCCCCTGCAGGCCATCCCGGAGATGGACT...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTAAGCGGCTCAGCGGCTTaGCCTTGCCGTGCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLSGSAA*PCRAPA
Trigger: CGCAGGCGCACGGCAAGGCCAAGCCGCTGAGCCGCT...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp ATTGTGACTTCTGTAGTATTTCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCCGTGCTGTAGAGGCGTaGGGCCACGCCGTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: IVTSVVFHFPRPVDLALCRAVEA*GHAVGW
Trigger: CCAGCCGACGGCGTGGCCCCACGCCTCTACAGCACG...GCACAACGCCAAATCGACTGGACGTGGAAAGTGAAATACTACAGAAGTCACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACGGTTGTGAGTGTGTGTaGCACTCAAGATCACGAGTG +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHGCECV*HSRSRV
Trigger: CACTCGTGATCTTGAGTGTCACACACACTCACAACC...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAGCTTCCCGGGCTGCATaGTCTCCATCAGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRASRAA*SPSGFA
Trigger: AGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGC...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTACTCTCGGGCCGCTCGTaGTTCCTGCCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLLSGRS*FLPSSS
Trigger: GGAGCTGGAGGGCAGGAAGCACGAGCGGCCCGAGAG...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTTCGGCCGCGCAGAACTaGGTCGGTGCCAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTSAAQN*VGARRL
Trigger: GAGCCTTCTGGCACCGACGCAGTTCTGCGCGGCCGA...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTACTCTTGGGCAGCGGCTaGAGCGGGTGCTCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLLLGSG*SGCSGR
Trigger: GCGGCCGGAGCACCCGCTGCAGCCGCTGCCCAAGAG...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTATCAGCGGCTTGGCCTTaGCGTGCGCCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLSAAWP*RAPAPP
Trigger: CGGCGGCGCAGGCGCACGGCAAGGCCAAGCCGCTGA...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTACGCTGCTGCTGCGCGTaGTGTAGAGGCGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLRCCCA*CRGVGP
Trigger: TGGCCCCACGCCTCTACAGCACGCGCAGCAGCAGCG...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCTTGTTTGGTGGGTGAAGAAGGTCCTGGATaGGCCGCGGGCGGCGACGGC +
Preference number: 4 (lower is better)
Translates to: SRSFARASRFLKKSCLVGEEGPG*AAGGDG
Trigger: GCCGTCGCCGCCCGCGGCGCATCCAGGACCTTCTTC...ACCCACCAAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR CCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAGCATCCTCATCGTCCTaGCTCAGGCCACCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRASSSS*LRPPPL
Trigger: AAGAGGAGGTGGCCTGAGCCAGGACGATGAGGATGC...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATGCCAGATGGGAGATaGCCCTTGGACTGGATATCA +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHMPDGR*PLDWIS
Trigger: TGATATCCAGTCCAAGGGCCATCTCCCATCTGGCAT...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGATCTCCAAGAACGCCTTaGCGTGGCCACTTCAGGACC +
Preference number: 4 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRSPRTP*RGHFRT
Trigger: GGTCCTGAAGTGGCCACGCCAAGGCGTTCTTGGAGA...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTGGGGGAAGAAGGTCCTaGATGCGCCGCGGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIGGRRS*MRRGRR
Trigger: TCGCCGCCCGCGGCGCATCCAGGACCTTCTTCCCCC...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACCTTCGCTTCTCCTGTTaGAGCTGCTCGATTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHLRFSC*SCSIFC
Trigger: ACAGAAAATCGAGCAGCTTCAACAGGAGAAGCGAAG...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp ATTGTGACTTCTGTAGTATTTCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCCCTCCATGGCGAAGCTaGCGGGCCGCAGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: IVTSVVFHFPRPVDLALCPPWRS*RAAGSR
Trigger: TCTGCTTCCTGCGGCCCGTCAGCTTCGCCATGGAGG...GCACAACGCCAAATCGACTGGACGTGGAAAGTGAAATACTACAGAAGTCACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCCACGCGGGAACTCTTTaGGAGAGCGGCTCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLHAGTL*ESGSAA
Trigger: AGCCGCTGAGCCGCTCTCTCAAAGAGTTCCCGCGTG...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGGACAGCCTCAGGACCTaGAGTGGGGGAAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLDSLRT*SGGSIL
Trigger: CAAGATGCTTCCCCCACTGCAGGTCCTGAGGCTGTC...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACAGGGAGCGCTCCACGTTaGCCAGCGGCTCCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTGSAPR*PAAPPE
Trigger: CTCCGGCGGAGCCGCTGGGCAACGTGGAGCGCTCCC...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACGGTAAAGTCTTCGCTTaGAAGAACAGGCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHGKVFA*KNRLRD
Trigger: ATCCCTGAGCCTGTTCTTCCAAGCGAAGACTTTACC...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAGATCCAGGTGCTGCTaGACGAGGTACCGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKRSRCC*TRYRKE
Trigger: CTCTTTACGGTACCTCGTCCAGCAGCACCTGGATCT...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCAAGAACGCCTTGGCGTaGCCACTTCAGGACCCTTTC +
Preference number: 4 (lower is better)
Translates to: HFITPEPGRPRCNLIPLSKNALA*PLQDPF
Trigger: GAAAGGGTCCTGAAGTGGCCACGCCAAGGCGTTCTT...GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCATCTTGCCCAGCATTaGCACACTGGGAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: NRAHFITPEPGRPRCNLIHLAQH*HTGKPA
Trigger: GGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGATG...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGTGGCAGGGCCAGAACTaGGAGCAGAAGGGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLWQGQN*EQKGRV
Trigger: AACCCTACCCTTCTGCTCCCAGTTCTGGCCCTGCCA...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTTGGCAGGGCCAGAACTaGGAGCAGAAGGGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: NRAHFITPEPGRPRCNLIWQGQN*EQKGRV
Trigger: AACCCTACCCTTCTGCTCCCAGTTCTGGCCCTGCCA...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTAAGCGGCTCAGCGGCTTaGCCTTGCCGTGCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLSGSAA*PCRAPA
Trigger: CGCAGGCGCACGGCAAGGCCAAGCCGCTGAGCCGCT...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CTGAAGAAATCTTGTTTGGTGGGTGAAGGATCCATTGAGGGATTCTCATTAGTTGGGGGAAGAAGGTCCTaGATGCGCCGCGGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: LKKSCLVGEGSIEGFSLVGGRRS*MRRGRR
Trigger: TCGCCGCCCGCGGCGCATCCAGGACCTTCTTCCCCC...AACTAATGAGAATCCCTCAATGGATCCTTCACCCACCAAACAAGATTTCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR TCA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGGGTGCTCCTGCTCTGTaGACTTCAGGACGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLGAPAL*TSGRSA
Trigger: TGCAGAACGTCCTGAAGTTCACAGAGCAGGAGCACC...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCGGGGCATCAGATGTGTaGTGGCAGGGCCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLGASDV*WQGQNW
Trigger: CCAGTTCTGGCCCTGCCATCACACATCTGATGCCCC...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCAGCAGATCCAGGTGCTaGTGGACGAGGTACCGTAAA +
Preference number: 4 (lower is better)
Translates to: HFITPEPGRPRCNLIPLSSRSRC*WTRYRK
Trigger: TTTACGGTACCTCGTCCAGCAGCACCTGGATCTGCT...GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTACCAGTTTGTAGGCGCTaGTGCTGCCCGCCGGCGACG +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLPVCRR*CCPPAT
Trigger: CGTCGCCGGCGGGCAGCAGCAGCGCCTACAAACTGG...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTACGCTGCTGCTGCGCGTaGTGTAGAGGCGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLRCCCA*CRGVGP
Trigger: TGGCCCCACGCCTCTACAGCACGCGCAGCAGCAGCG...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTCCAGCTCCCAGTCACTaGGCTTCCCGGGCTGCATGC +
Preference number: 4 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIPAPSH*ASRAAC
Trigger: GCATGCAGCCCGGGAAGCCCAGTGACTGGGAGCTGG...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTAAGCAGATGTCCAGGCTaGACTCGGAGGAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLSRCPG*TRRRQA
Trigger: CGCCTGCCTCCTCCGAGTCCAGCCTGGACATCTGCT...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGACACGTCCAGTCGATTTaGCGTTGTGCTTGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRHVQSI*RCACKH
Trigger: GTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGCTGGGTGGTCTTTTGTaGCGTATTCTTCACCCCATT +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKLGGLL*RILHPI
Trigger: AATGGGGTGAAGAATACGTCACAAAAGACCACCCAG...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACTTCAGGACTACAACATaGACCAATGAGATGCACTCA +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHFRTTT*TNEMHS
Trigger: TGAGTGCATCTCATTGGTTCATGTTGTAGTCCTGAA...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTAGCCGCTCGTGCTTCCTaGCCTCCAGCTCCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLAARAS*PPAPSH
Trigger: GTGACTGGGAGCTGGAGGGCAGGAAGCACGAGCGGC...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp AGGTTCAAAAAGCCAGATCTTAACCAGAAACTAATCTTCATCTCTTCAATGTCTCTCTTGGGCAGCGGCTaGAGCGGGTGCTCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: RFKKPDLNQKLIFISSMSLLGSG*SGCSGR
Trigger: GCGGCCGGAGCACCCGCTGCAGCCGCTGCCCAAGAG...AGACATTGAAGAGATGAAGATTAGTTTCTGGTTAAGATCTGGCTTTTTGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGTGTGCTTGCAAGCACTaGCGGCCACATAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKCACKH*RPHNKR
Trigger: TCTCTTATTATGTGGCCGGCAGTGCTTGCAAGCACA...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCGTCGATTTGGCGTTGTaGTTGCAAGCACTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLVDLAL*LQALPA
Trigger: GGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGAC...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAATGCCAGATGGGAGATaGCCCTTGGACTGGATATCA +
Preference number: 4 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRMPDGR*PLDWIS
Trigger: TGATATCCAGTCCAAGGGCCATCTCCCATCTGGCAT...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACTTTCCATCTGACCCCTaGAATGTGGCTTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHFPSDP*NVAFIF
Trigger: GAAGATAAAAGCCACATTCCAGGGGTCAGATGGAAA...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACAGAGGCTTCTCTCTTTaGAATTCCTCTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHRGFSL*NSSFHL
Trigger: CAGATGGAAAGAGGAATTCCAAAGAGAGAAGCCTCT...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTACCAGCTCCCAGTCACTaGGCTTCCCGGGCTGCATGC +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLPAPSH*ASRAAC
Trigger: GCATGCAGCCCGGGAAGCCCAGTGACTGGGAGCTGG...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGCTTCTTGTTTGGAAGTaGTGGCTTGGATCATCGACA +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKLLVWK*WLGSST
Trigger: TGTCGATGATCCAAGCCATCACTTCCAAACAAGAAG...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACACCTCCATGGCGAAGCTaGCGGGCCGCAGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTPPWRS*RAAGSR
Trigger: TCTGCTTCCTGCGGCCCGTCAGCTTCGCCATGGAGG...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAAGCAACTGCTGTGTGTaGGCCATTGAAGTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRSNCCV*AIEVLV
Trigger: CACCAAAACTTCAATGGCTCACACACAGCAGTTGCT...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CACTTGGGTAATCCATTCCAGCTCTGCACCTTCTCCAGTTTTCTCATGTCAGAATCAGATCAGTCCATTTaGGTCCCCAGTCGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HLGNPFQLCTFSSFLMSESDQSI*VPSRGC
Trigger: GCACCCTCGACTGGGGACTCAAATGGACTGATCTGA...TTCTGACATGAGAAAACTGGAGAAGGTGCAGAGCTGGAATGGATTACCCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR GCA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCTCGGCCGCGCAGAACTaGGTCGGTGCCAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCSAAQN*VGARRL
Trigger: GAGCCTTCTGGCACCGACGCAGTTCTGCGCGGCCGA...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGACTGGTAAATCTGCGTaGAAGGATTATTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKTGKSA*KDYSPA
Trigger: TGCCGGTGAATAATCCTTCCACGCAGATTTACCAGT...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGTTGGAAGTGATGGCTTaGATCATCGACATGGCATTG +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKLEVMA*IIDMAL
Trigger: CAATGCCATGTCGATGATCCAAGCCATCACTTCCAA...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTAGGACTTCCTTGTGCTTaGGCAGGCCCGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLGLPCA*AGPACE
Trigger: CTCACAGGCCGGGCCTGCCCAAGCACAAGGAAGTCC...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAGGTAAAGTCTTCGCTTaGAAGAACAGGCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRGKVFA*KNRLRD
Trigger: ATCCCTGAGCCTGTTCTTCCAAGCGAAGACTTTACC...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTCCTCAGGACCTGCAGTaGGGGAAGCATCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIPQDLQ*GKHLAQ
Trigger: CTGGGCAAGATGCTTCCCCCACTGCAGGTCCTGAGG...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp AGGTTCAAAAAGCCAGATCTTAACCAGAAACTAATCTTCATCTCTTCAATGTCTGGGGGAAGAAGGTCCTaGATGCGCCGCGGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: RFKKPDLNQKLIFISSMSGGRRS*MRRGRR
Trigger: TCGCCGCCCGCGGCGCATCCAGGACCTTCTTCCCCC...AGACATTGAAGAGATGAAGATTAGTTTCTGGTTAAGATCTGGCTTTTTGAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCTTCGCTTCTCCTGTTaGAGCTGCTCGATTTTCTGT +
Preference number: 4 (lower is better)
Translates to: NRAHFITPEPGRPRCNLILRFSC*SCSIFC
Trigger: ACAGAAAATCGAGCAGCTTCAACAGGAGAAGCGAAG...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACTACCAAGATTTTGAATaGACAGAAACCAAATACCCC +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHYQDFE*TETKYP
Trigger: GGGGTATTTGGTTTCTGTTCATTCAAAATCTTGGTA...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCTTGGATCATCGACATaGCATTGCTCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NRAHFITPEPGRPRCNLILGSST*HCSALP
Trigger: AGGAAGAGCTGAGCAATGCCATGTCGATGATCCAAG...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGATTGGAAGTGATGGCTTaGATCATCGACATGGCATTG +
Preference number: 4 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRLEVMA*IIDMAL
Trigger: CAATGCCATGTCGATGATCCAAGCCATCACTTCCAA...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTATGGGAGATGGCCCTTaGACTGGATATCAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTMGDGP*TGYQPR
Trigger: TCTCGGCTGATATCCAGTCCAAGGGCCATCTCCCAT...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCGAGCTGTGTCTACCCTaGCCAGCCTCCTTGAGTTTA +
Preference number: 4 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLELCLP*PASLSL
Trigger: TAAACTCAAGGAGGCTGGCCAGGGTAGACACAGCTC...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCGTGCCCTGTCTCCACTaGGAGACATCACAGCATGTT +
Preference number: 4 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLVPCLH*ETSQHV
Trigger: AACATGCTGTGATGTCTCCCAGTGGAGACAGGGCAC...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409978.7
3UTR CAA 72 bp CGAGGGTGCATTCTTCCTTTATCTTGCTTAAGCCACTaGGGTAATCCATTCCAGCTCTGCACCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RGCILPLSCLSH*GNPFQLCTFSS
Trigger: ACTGGAGAAGGTGCAGAGCTGGAATGGATTACCCAAGTGGCTTAAGCAAGATAAAGGAAGAATGCACCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR TCA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGCTTCTTGTTTGGAAGTaGTGGCTTGGATCATCGACA +
Preference number: 4 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLLLVWK*WLGSST
Trigger: TGTCGATGATCCAAGCCATCACTTCCAAACAAGAAG...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCGGGGCATCAGATGTGTaGTGGCAGGGCCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCGASDV*WQGQNW
Trigger: CCAGTTCTGGCCCTGCCATCACACATCTGATGCCCC...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGTCAAAACGCAGTAGGTaGGTTCCTAATTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKSKRSR*VPNLSS
Trigger: TGATGACAAATTAGGAACTCACCTACTGCGTTTTGA...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTATTACCATCCTTAGGCTaGCTCCACATGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLLPSLG*LHMPDG
Trigger: CCCATCTGGCATGTGGAGGCAGCCTAAGGATGGTAA...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTAGCTTCCCGGGCTGCATaGTCTCCATCAGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLASRAA*SPSGFA
Trigger: AGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGC...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGGCAGAACTGCGTCGGTaGCAGAAGGCTCTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILAELRR*QKALGP
Trigger: CGGCCCGAGAGCCTTCTGGCACCGACGCAGTTCTGC...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACAGCAGAACTGCGTCGGTaGCAGAAGGCTCTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTAELRR*QKALGP
Trigger: CGGCCCGAGAGCCTTCTGGCACCGACGCAGTTCTGC...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACTTTACTATACCGAACTaGCTGGGAATAAAGACAAAT +
Preference number: 4 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHFTIPN*LGIKTN
Trigger: ATTTGTCTTTATTCCCAGGCAGTTCGGTATAGTAAA...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTAGCATCCTCATCGTCCTaGCTCAGGCCACCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLASSSS*LRPPPL
Trigger: AAGAGGAGGTGGCCTGAGCCAGGACGATGAGGATGC...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCTGCTTCTGGAGTTGTTaGGTTCACTCCAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLCFWSC*VHSRTH
Trigger: ATGGGTCCTGGAGTGAACCCAACAACTCCAGAAGCA...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp ATTGTGACTTCTGTAGTATTTCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCGAGCTGTGTCTACCCTaGCCAGCCTCCTTGAGTTTA +
Preference number: 4 (lower is better)
Translates to: IVTSVVFHFPRPVDLALCELCLP*PASLSL
Trigger: TAAACTCAAGGAGGCTGGCCAGGGTAGACACAGCTC...GCACAACGCCAAATCGACTGGACGTGGAAAGTGAAATACTACAGAAGTCACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCGTCTGTTTTTCGCTTTaGGACCTCTGTTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLVCFSL*DLCWGK
Trigger: CTTCCCCCAACAGAGGTCCCAAAGCGAAAAACAGAC...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCAGAAATCTTGTTTGGTaGGTGAAGGATCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: HFITPEPGRPRCNLIPLSRNLVW*VKDPLR
Trigger: CCTCAATGGATCCTTCACCCACCAAACAAGATTTCT...GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAACTCAAGATCACGAGTaGGTCTTGAATACTGAGTAC +
Preference number: 4 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRTQDHE*VLNTEY
Trigger: GTACTCAGTATTCAAGACCCACTCGTGATCTTGAGT...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGTTCAGGACTACAACATaGACCAATGAGATGCACTCA +
Preference number: 4 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLFRTTT*TNEMHS
Trigger: TGAGTGCATCTCATTGGTTCATGTTGTAGTCCTGAA...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCCTGAATTTTCACTTTaGCCTGCTGTTTGTAGCAAC +
Preference number: 4 (lower is better)
Translates to: NRAHFITPEPGRPRCNLIPEFSL*PAVCSN
Trigger: GTTGCTACAAACAGCAGGTCAAAGTGAAAATTCAGG...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCGACAGCCTCAGGACCTaGAGTGGGGGAAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCDSLRT*SGGSIL
Trigger: CAAGATGCTTCCCCCACTGCAGGTCCTGAGGCTGTC...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTTTGGTCAAGGTCATTTaGAAGAGCAAGTCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: NRAHFITPEPGRPRCNLILVKVI*KSKSVS
Trigger: AGAAACCGACTTGCTCTTGCAAATGACCTTGACCAA...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAAGTTTTGGTGCTATTaGCACCTTCTTTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLKFWCY*HLLFRL
Trigger: CAGCCTGAAAAGAAGGTGGCAATAGCACCAAAACTT...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTATTTGGCGTTGTGCTTaGAAGCACTGCCGGCCACAT +
Preference number: 4 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIIWRCA*KHCRPH
Trigger: ATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAAT...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp AGCTCTGCACCTTCTCCAGTTTTCTCATGTCAGAAGTCCCTGAAAATAGGAAAGGTCCCCAGTCGAGGGTaGATTCTTCCTTTATCTTGC +
Preference number: 4 (lower is better)
Translates to: SSAPSPVFSCQKSLKIGKVPSRG*ILPLSC
Trigger: GCAAGATAAAGGAAGAATGCACCCTCGACTGGGGAC...CTTTCCTATTTTCAGGGACTTCTGACATGAGAAAACTGGAGAAGGTGCAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR CCA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTAGAGGCTTCTCTCTTTaGAATTCCTCTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: NRAHFITPEPGRPRCNLIRGFSL*NSSFHL
Trigger: CAGATGGAAAGAGGAATTCCAAAGAGAGAAGCCTCT...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTAAATACTCGGAGGCGCTaGACACACACCAGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLNTRRR*THTSSR
Trigger: TCTACTACTGGTGTGTGTCCAGCGCCTCCGAGTATT...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTCACGTCCAGTCGATTTaGCGTTGTGCTTGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIHVQSI*RCACKH
Trigger: GTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTACTGGGTGGTCTTTTGTaGCGTATTCTTCACCCCATT +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLLGGLL*RILHPI
Trigger: AATGGGGTGAAGAATACGTCACAAAAGACCACCCAG...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCCTGGCCAGCCTCCTTaGGTTTATCTGGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCPGQPP*VYLGGL
Trigger: AAGACCACCCAGATAAACTCAAGGAGGCTGGCCAGG...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTACAGCAGGGTGTAGTGTaGGATAAATACTCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLQQGVV*DKYSEA
Trigger: CGCCTCCGAGTATTTATCTCACACTACACCCTGCTG...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTAAGCAACTGCTGTGTGTaGGCCATTGAAGTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLSNCCV*AIEVLV
Trigger: CACCAAAACTTCAATGGCTCACACACAGCAGTTGCT...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCCAAGTGCTGCAATCCTaGATTTTCACTTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLQVLQS*IFTLTC
Trigger: GCAGGTCAAAGTGAAAATTCAGGATTGCAGCACTTG...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CACTTGGGTAATCCATTCCAGCTCTGCACCTTCTCCAGTTTTCTCATGTCAGAAAAAATAGGAAAGCTTTaGTGTCACCACCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: HLGNPFQLCTFSSFLMSEKIGKL*CHHQPQ
Trigger: TTGGGGCTGGTGGTGACATCAAAGCTTTCCTATTTT...TTCTGACATGAGAAAACTGGAGAAGGTGCAGAGCTGGAATGGATTACCCAAGTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR GCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTACATGAACCAATGAGATaGACTCAGGCAGGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLHEPMR*TQAGPL
Trigger: TAAGGGACCTGCCTGAGTGCATCTCATTGGTTCATG...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp AGGTTCAAAAAGCCAGATCTTAACCAGAAACTAATCTTCATCTCTTCAATGTCTCTGGGCTTCCCGGGCTaGATGCTCTCCATCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RFKKPDLNQKLIFISSMSLGFPG*MLSIRL
Trigger: AAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAG...AGACATTGAAGAGATGAAGATTAGTTTCTGGTTAAGATCTGGCTTTTTGAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTAATTTGGCGTTGTGCTTaGAAGCACTGCCGGCCACAT +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLIWRCA*KHCRPH
Trigger: ATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAAT...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTAAGTTCCCATGTTGCCTaGGGTGGTTATATCATCCTC +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLSSHVA*GGYIIL
Trigger: GAGGATGATATAACCACCGCAGGCAACATGGGAACT...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409978.7
CDS-3UTR GCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGCTTCCCTGCACCTCGTaGCCTGTCTCCACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILLPCTS*PVSTGR
Trigger: TCTCCCAGTGGAGACAGGGCACGAGGTGCAGGGAAG...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCACTGGTAAATCTGCGTaGAAGGATTATTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLTGKSA*KDYSPA
Trigger: TGCCGGTGAATAATCCTTCCACGCAGATTTACCAGT...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTTTGGCTTTTCTTCACTaGGGGCATCAGATGTGTGAT +
Preference number: 4 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTLAFLH*GHQMCD
Trigger: ATCACACATCTGATGCCCCCAGTGAAGAAAAGCCAA...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCTTGGCTTTTCTTCACTaGGGGCATCAGATGTGTGAT +
Preference number: 4 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLLAFLH*GHQMCD
Trigger: ATCACACATCTGATGCCCCCAGTGAAGAAAAGCCAA...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCTTGTTTGGTGGGTGAAGGAGTCTGTTTTTCGCTTTaGGACCTCTGTTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SFARASRFLKKSCLVGEGVCFSL*DLCWGK
Trigger: CTTCCCCCAACAGAGGTCCCAAAGCGAAAAACAGAC...TCCTTCACCCACCAAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR CCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTACCATGTTGCCTGCGGTaGTTATATCATCCTCAGATC +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLPCCLR*LYHPQI
Trigger: GATCTGAGGATGATATAACCACCGCAGGCAACATGG...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCAGCAGGGTGTAGTGTaGGATAAATACTCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCQQGVV*DKYSEA
Trigger: CGCCTCCGAGTATTTATCTCACACTACACCCTGCTG...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTTCTTGCCTGGGATTTTaGTCGCTGAAAGATGTTTGT +
Preference number: 4 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTSCLGF*SLKDVC
Trigger: ACAAACATCTTTCAGCGATCAAAATCCCAGGCAAGA...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCTCTTGCCTGGGATTTTaGTCGCTGAAAGATGTTTGT +
Preference number: 4 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLSCLGF*SLKDVC
Trigger: ACAAACATCTTTCAGCGATCAAAATCCCAGGCAAGA...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTACAAGTGCTGCAATCCTaGATTTTCACTTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLQVLQS*IFTLTC
Trigger: GCAGGTCAAAGTGAAAATTCAGGATTGCAGCACTTG...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp AGGTTCAAAAAGCCAGATCTTAACCAGAAACTAATCTTCATCTCTTCAATGTCTAAAAGGACTTCCTTGTaGTTGGGCAGGCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: RFKKPDLNQKLIFISSMSKRTSL*LGRPGL
Trigger: CAGGCCGGGCCTGCCCAAGCACAAGGAAGTCCTTTT...AGACATTGAAGAGATGAAGATTAGTTTCTGGTTAAGATCTGGCTTTTTGAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp AGGTTCAAAAAGCCAGATCTTAACCAGAAACTAATCTTCATCTCTTCAATGTCTGTGGGGGAAGCATCTTaGCCAGCATTGGCACACTGG +
Preference number: 4 (lower is better)
Translates to: RFKKPDLNQKLIFISSMSVGEAS*PALAHW
Trigger: CCAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCAC...AGACATTGAAGAGATGAAGATTAGTTTCTGGTTAAGATCTGGCTTTTTGAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGCCTCCACATGCCAGATaGGAGATGGCCCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILPPHAR*EMALGL
Trigger: CAGTCCAAGGGCCATCTCCCATCTGGCATGTGGAGG...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp AGGTTCAAAAAGCCAGATCTTAACCAGAAACTAATCTTCATCTCTTCAATGTCTCCTCCACATGCCAGATaGGAGATGGCCCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: RFKKPDLNQKLIFISSMSPPHAR*EMALGL
Trigger: CAGTCCAAGGGCCATCTCCCATCTGGCATGTGGAGG...AGACATTGAAGAGATGAAGATTAGTTTCTGGTTAAGATCTGGCTTTTTGAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTAAATACTCGGAGGCGCTaGACACACACCAGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLNTRRR*THTSSR
Trigger: TCTACTACTGGTGTGTGTCCAGCGCCTCCGAGTATT...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGCATCTTGCCCAGCATTaGCACACTGGGAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILHLAQH*HTGKPA
Trigger: GGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGATG...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCAGAAATCTTGTTTGGTaGGTGAAGGATCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLRNLVW*VKDPLR
Trigger: CCTCAATGGATCCTTCACCCACCAAACAAGATTTCT...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTACTCAAGATCACGAGTaGGTCTTGAATACTGAGTAC +
Preference number: 4 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTTQDHE*VLNTEY
Trigger: GTACTCAGTATTCAAGACCCACTCGTGATCTTGAGT...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR CAA 72 bp AAGCCAATCAATAGTCAACAACTCAGATCAGTCCATTaGAGTCCCCAGTCGAGGGTGCATTCTTCCTTTATC +
Preference number: 4 (lower is better)
Translates to: KPINSQQLRSVH*SPQSRVHSSFI
Trigger: GATAAAGGAAGAATGCACCCTCGACTGGGGACTCAAATGGACTGATCTGAGTTGTTGACTATTGATTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR TCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTAATTCCTCTTTCCATCTaGCCCCTGGAATGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLIPLSI*PLECGF
Trigger: AAAGCCACATTCCAGGGGTCAGATGGAAAGAGGAAT...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGGGTGCTCCTGCTCTGTaGACTTCAGGACGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILGAPAL*TSGRSA
Trigger: TGCAGAACGTCCTGAAGTTCACAGAGCAGGAGCACC...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp GCTGTTCCTTGGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCTTCTTGCCTGGGATTTTaGTCGCTGAAAGATGTTTGT +
Preference number: 4 (lower is better)
Translates to: AVPWSRSFARASRFLKKSSCLGF*SLKDVC
Trigger: ACAAACATCTTTCAGCGATCAAAATCCCAGGCAAGA...AGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAGGAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR TCA 90 bp TCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCTTGTTTGGTGGGTGAGCAAGTCGGTTTCTaGAGAAATCTTGTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SRSFARASRFLKKSCLVGEQVGF*RNLVWW
Trigger: CCACCAAACAAGATTTCTTCAGAAACCGACTTGCTC...ACCCACCAAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR TCA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTGTGGGTCTTGAATACTaGGTACTCAATAAAACACAG +
Preference number: 4 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTVGLEY*VLNKTQ
Trigger: CTGTGTTTTATTGAGTACTCAGTATTCAAGACCCAC...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTGCATATCAAGGATGCTaGCCATCTTGCACATATCCA +
Preference number: 4 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIAYQGC*PSCTYP
Trigger: TGGATATGTGCAAGATGGTCAGCATCCTTGATATGC...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTTCAAAACGCAGTAGGTaGGTTCCTAATTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTSKRSR*VPNLSS
Trigger: TGATGACAAATTAGGAACTCACCTACTGCGTTTTGA...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTTCCATCAGGCTTTGCTaGTGTTGGCTTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLISIRLC*CWLFFT
Trigger: AGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGA...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp AGAGCAAGTCGGTTTCTGAAGAAATCTTGTTTGGTGGGTGAAGGATCCATTGAGTTGGTCAAGGTCATTTaGAAGAGCAAGTCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: RASRFLKKSCLVGEGSIELVKVI*KSKSVS
Trigger: AGAAACCGACTTGCTCTTGCAAATGACCTTGACCAA...CTCAATGGATCCTTCACCCACCAAACAAGATTTCTTCAGAAACCGACTTGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR GCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTAAAGTTTTGGTGCTATTaGCACCTTCTTTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLKFWCY*HLLFRL
Trigger: CAGCCTGAAAAGAAGGTGGCAATAGCACCAAAACTT...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTCCATTGAAGTTTTGGTaGTATTGCCACCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTPLKFW*YCHLLF
Trigger: GAAAAGAAGGTGGCAATAGCACCAAAACTTCAATGG...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp AGGTTCAAAAAGCCAGATCTTAACCAGAAACTAATCTTCATCTCTTCAATGTCTAAGAACGCCTTGGCGTaGCCACTTCAGGACCCTTTC +
Preference number: 4 (lower is better)
Translates to: RFKKPDLNQKLIFISSMSKNALA*PLQDPF
Trigger: GAAAGGGTCCTGAAGTGGCCACGCCAAGGCGTTCTT...AGACATTGAAGAGATGAAGATTAGTTTCTGGTTAAGATCTGGCTTTTTGAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GCAGAAATTCGTACAGTAATCAGATTGCAGAGATACTATAATCTCAACCACCACGTCTGTTTTTCGCTTTaGGACCTCTGTTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: AEIRTVIRLQRYYNLNHHVCFSL*DLCWGK
Trigger: CTTCCCCCAACAGAGGTCCCAAAGCGAAAAACAGAC...GTGGTGGTTGAGATTATAGTATCTCTGCAATCTGATTACTGTACGAATTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR CCA 90 bp ATTGTGACTTCTGTAGTATTTCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTACACAGCTGTTCCTTaGTCAAGGTCATTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: IVTSVVFHFPRPVDLALCYTAVP*SRSFAR
Trigger: TCTTGCAAATGACCTTGACCAAGGAACAGCTGTGTA...GCACAACGCCAAATCGACTGGACGTGGAAAGTGAAATACTACAGAAGTCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTATACACAGCTGTTCCTTaGTCAAGGTCATTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLYTAVP*SRSFAR
Trigger: TCTTGCAAATGACCTTGACCAAGGAACAGCTGTGTA...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCTACAACATGAACCAATaGGATGCACTCAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCYNMNQ*DALRQV
Trigger: GACCTGCCTGAGTGCATCTCATTGGTTCATGTTGTA...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGTTGCAGCAACTCTTCTaGGTGGATCCCAGTGTCACG +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILLQQLF*VDPSVT
Trigger: CGTGACACTGGGATCCACTCAGAAGAGTTGCTGCAA...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACATTGCAGCAACTCTTCTaGGTGGATCCCAGTGTCACG +
Preference number: 4 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTLQQLF*VDPSVT
Trigger: CGTGACACTGGGATCCACTCAGAAGAGTTGCTGCAA...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTGGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCTTGTTTGGTAAAATAGGAAAGCTTTaGTGTCACCACCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LVKVICKSKSVSEEILFGKIGKL*CHHQPQ
Trigger: TTGGGGCTGGTGGTGACATCAAAGCTTTCCTATTTT...ACCAAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR TCA 90 bp GCTGTTCCTTGGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCTTTTTTCCCTGTATTCTaGTCCACTGGACCTAAAATC +
Preference number: 4 (lower is better)
Translates to: AVPWSRSFARASRFLKKSFFPVF*STGPKI
Trigger: GATTTTAGGTCCAGTGGATCAGAATACAGGGAAAAA...AGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAGGAACAGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR GCA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACACATGAACCAATGAGATaGACTCAGGCAGGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTHEPMR*TQAGPL
Trigger: TAAGGGACCTGCCTGAGTGCATCTCATTGGTTCATG...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACATGTGCTTGCAAGCACTaGCGGCCACATAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTCACKH*RPHNKR
Trigger: TCTCTTATTATGTGGCCGGCAGTGCTTGCAAGCACA...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTACTACATGAACAGATCTaGACTCTTGGGCTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLLHEQI*TLGLSR
Trigger: ACGAGAAAGCCCAAGAGTCCAGATCTGTTCATGTAG...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp AGGTTCAAAAAGCCAGATCTTAACCAGAAACTAATCTTCATCTCTTCAATGTCTAGATGGCCCTTGGACTaGATATCAGCCGAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RFKKPDLNQKLIFISSMSRWPLD*ISAERQ
Trigger: TTGCCTCTCGGCTGATATCCAGTCCAAGGGCCATCT...AGACATTGAAGAGATGAAGATTAGTTTCTGGTTAAGATCTGGCTTTTTGAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTTTTCCATCTGACCCCTaGAATGTGGCTTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIFPSDP*NVAFIF
Trigger: GAAGATAAAAGCCACATTCCAGGGGTCAGATGGAAA...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCTTGTTTGGTGGGTTACACAGCTGTTCCTTaGTCAAGGTCATTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: SRSFARASRFLKKSCLVGYTAVP*SRSFAR
Trigger: TCTTGCAAATGACCTTGACCAAGGAACAGCTGTGTA...ACCCACCAAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411874.6
3UTR CAA 72 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTaGTTCCCTTTACTGATTTCCATAACCACAGAACAA +
Preference number: 4 (lower is better)
Translates to: FAFLSPQFLQKS*FPLLISITTEQ
Trigger: TTGTTCTGTGGTTATGGAAATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR CAA 72 bp TTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCTTGTTaGGTGGGTGAAGGATCCATTGAGGGATTCTCATTA +
Preference number: 4 (lower is better)
Translates to: FARASRFLKKSC*VGEGSIEGFSL
Trigger: TAATGAGAATCCCTCAATGGATCCTTCACCCACCAAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR TCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTATGGGATTTTGATCGCTaGAAGATGTTTGTTCACTTT +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLWDFDR*KMFVHF
Trigger: AAAGTGAACAAACATCTTTCAGCGATCAAAATCCCA...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp ACAGCTGTTCCTTGGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATGGGATTTTGATCGCTaGAAGATGTTTGTTCACTTT +
Preference number: 4 (lower is better)
Translates to: TAVPWSRSFARASRFLKKWDFDR*KMFVHF
Trigger: AAAGTGAACAAACATCTTTCAGCGATCAAAATCCCA...TTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAGGAACAGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR TCA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCGAGCAAGTCGGTTTCTaGAGAAATCTTGTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCEQVGF*RNLVWW
Trigger: CCACCAAACAAGATTTCTTCAGAAACCGACTTGCTC...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTAATTATACTCGGGGAATaGCTTCAAGTTGGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLIILGE*LQVGSF
Trigger: AAAACTTCCAACTTGAAGTCATTCCCCGAGTATAAT...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTTCAGATATTCAGGGATaGGCTGGACTATGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLISDIQG*AGLCEK
Trigger: TTTTTCACATAGTCCAGCGCATCCCTGAATATCTGA...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACATCCATCAGGCTTTGCTaGTGTTGGCTTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTSIRLC*CWLFFT
Trigger: AGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGA...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTAAGGGATGTTAGATATTaGCTTAGGGTTTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLRDVRY*LRVFGR
Trigger: TCTTCCAAAAACCCTAAGGCAATATCTAACATCCCT...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACATGCTTCTGGAGTTGTTaGGTTCACTCCAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTCFWSC*VHSRTH
Trigger: ATGGGTCCTGGAGTGAACCCAACAACTCCAGAAGCA...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTATTGAGTTTATCTGGGTaGTCTTTTGTGACGTATTCT +
Preference number: 4 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLLSLSG*SFVTYS
Trigger: AGAATACGTCACAAAAGACCACCCAGATAAACTCAA...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGGTCTGTTTTTCGCTTTaGGACCTCTGTTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILVCFSL*DLCWGK
Trigger: CTTCCCCCAACAGAGGTCCCAAAGCGAAAAACAGAC...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp TTGGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCTTGTTTGGTAGAAATCTTGTTTGGTaGGTGAAGGATCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: LVKVICKSKSVSEEILFGRNLVW*VKDPLR
Trigger: CCTCAATGGATCCTTCACCCACCAAACAAGATTTCT...ACCAAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR TCA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACAATTCCTCTTTCCATCTaGCCCCTGGAATGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTIPLSI*PLECGF
Trigger: AAAGCCACATTCCAGGGGTCAGATGGAAAGAGGAAT...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACATACAACATGAACCAATaGGATGCACTCAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTYNMNQ*DALRQV
Trigger: GACCTGCCTGAGTGCATCTCATTGGTTCATGTTGTA...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CAACCACCACAAAAGAGACCAAAGCCAATCAATAGTCAACAACTCAGATCAGTCTGGGATTTTGATCGCTaGAAGATGTTTGTTCACTTT +
Preference number: 4 (lower is better)
Translates to: QPPQKRPKPINSQQLRSVWDFDR*KMFVHF
Trigger: AAAGTGAACAAACATCTTTCAGCGATCAAAATCCCA...GACTGATCTGAGTTGTTGACTATTGATTGGCTTTGGTCTCTTTTGTGGTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR TCA 90 bp CAAAAGAGACCAAAGCCAATCAATAGTCAACAACTCAGATCAGTCCATTTGAGTTCTTGCCTGGGATTTTaGTCGCTGAAAGATGTTTGT +
Preference number: 4 (lower is better)
Translates to: QKRPKPINSQQLRSVHLSSCLGF*SLKDVC
Trigger: ACAAACATCTTTCAGCGATCAAAATCCCAGGCAAGA...ACTCAAATGGACTGATCTGAGTTGTTGACTATTGATTGGCTTTGGTCTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR TCA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACACCTGAATTTTCACTTTaGCCTGCTGTTTGTAGCAAC +
Preference number: 4 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTPEFSL*PAVCSN
Trigger: GTTGCTACAAACAGCAGGTCAAAGTGAAAATTCAGG...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACACTTATTCTTCAACATTaGATCCTCATCGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTLILQH*ILIVLA
Trigger: AGCCAGGACGATGAGGATGCAATGTTGAAGAATAAG...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGTTACTGTCTCCTACATaGACAGATCTGGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILLLSPT*TDLDSW
Trigger: CCAAGAGTCCAGATCTGTTCATGTAGGAGACAGTAA...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGGAGCAAGTCGGTTTCTaGAGAAATCTTGTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILEQVGF*RNLVWW
Trigger: CCACCAAACAAGATTTCTTCAGAAACCGACTTGCTC...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACAGTAGTATCTTCTAAATaGATCTCCCTCCTTACTTCC +
Preference number: 4 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTVVSSK*ISLLTS
Trigger: GGAAGTAAGGAGGGAGATGCATTTAGAAGATACTAC...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCCATTGAAGTTTTGGTaGTATTGCCACCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCPLKFW*YCHLLF
Trigger: GAAAAGAAGGTGGCAATAGCACCAAAACTTCAATGG...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTATATAAATCTGATGTTTaGGGCATATCAAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLYKSDV*GISRML
Trigger: CAGCATCCTTGATATGCCCCAAACATCAGATTTATA...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR CAA 72 bp CAATACAACTTTAAGTATGTTTTACACAGCTGTTCCTaGGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: QYNFKYVLHSCS*VKVICKSKSVS
Trigger: AGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAGGAACAGCTGTGTAAAACATACTTAAAGTTGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR TCA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCTGCAACACTTACATGTaGACCTTTGCCTATTTTATC +
Preference number: 4 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCCNTYM*TFAYFI
Trigger: GATAAAATAGGCAAAGGTTCACATGTAAGTGTTGCA...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGCTTATTCTTCAACATTaGATCCTCATCGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILLILQH*ILIVLA
Trigger: AGCCAGGACGATGAGGATGCAATGTTGAAGAATAAG...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGCTTGAGGTTTTCTTCTaGTTCTGGAGTTGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILLEVFF*FWSCWV
Trigger: AACCCAACAACTCCAGAAGCAGAAGAAAACCTCAAG...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACATTGGTCAAGGTCATTTaGAAGAGCAAGTCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTLVKVI*KSKSVS
Trigger: AGAAACCGACTTGCTCTTGCAAATGACCTTGACCAA...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACATTGAGTTTATCTGGGTaGTCTTTTGTGACGTATTCT +
Preference number: 4 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTLSLSG*SFVTYS
Trigger: AGAATACGTCACAAAAGACCACCCAGATAAACTCAA...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CCA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACATATAAATCTGATGTTTaGGGCATATCAAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTYKSDV*GISRML
Trigger: CAGCATCCTTGATATGCCCCAAACATCAGATTTATA...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGTCAGATATTCAGGGATaGGCTGGACTATGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILSDIQG*AGLCEK
Trigger: TTTTTCACATAGTCCAGCGCATCCCTGAATATCTGA...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp AGGTTCAAAAAGCCAGATCTTAACCAGAAACTAATCTTCATCTCTTCAATGTCTGTAGTATCTTCTAAATaGATCTCCCTCCTTACTTCC +
Preference number: 4 (lower is better)
Translates to: RFKKPDLNQKLIFISSMSVVSSK*ISLLTS
Trigger: GGAAGTAAGGAGGGAGATGCATTTAGAAGATACTAC...AGACATTGAAGAGATGAAGATTAGTTTCTGGTTAAGATCTGGCTTTTTGAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGTGGGATTTTGATCGCTaGAAGATGTTTGTTCACTTT +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILWDFDR*KMFVHF
Trigger: AAAGTGAACAAACATCTTTCAGCGATCAAAATCCCA...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGTTTTTCCCTGTATTCTaGTCCACTGGACTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILFFPVF*STGLLF
Trigger: AAAAAGAAGTCCAGTGGATCAGAATACAGGGAAAAA...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACATTTTTCCCTGTATTCTaGTCCACTGGACTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTFFPVF*STGLLF
Trigger: AAAAAGAAGTCCAGTGGATCAGAATACAGGGAAAAA...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGTACCAAGATTTTGAATaGACAGAAACCAAATACCCC +
Preference number: 4 (lower is better)
Translates to: FFYYKSDVWGISRMLTILYQDFE*TETKYP
Trigger: GGGGTATTTGGTTTCTGTTCATTCAAAATCTTGGTA...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR TCA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACATGCAACACTTACATGTaGACCTTTGCCTATTTTATC +
Preference number: 4 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTCNTYM*TFAYFI
Trigger: GATAAAATAGGCAAAGGTTCACATGTAAGTGTTGCA...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR GCA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACAAGGGATGTTAGATATTaGCTTAGGGTTTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTRDVRY*LRVFGR
Trigger: TCTTCCAAAAACCCTAAGGCAATATCTAACATCCCT...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
3UTR CAA 72 bp AGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTaGCCTATTTTATCAACAAACGCTTCAATAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RRRKLATLTCEP*PILSTNASIEE
Trigger: TTCCTCTATTGAAGCGTTTGTTGATAAAATAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 90 bp CTGCCCGCCGGCGACGTAGCGCTCTTGGGCAGCGGCTGCAGCGGGTaGTCCGGCCGCTCGGCCTCCATGGCGAAGCTGACGGGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: LPAGDVALLGSGCSG*SGRSASMAKLTGRR
Trigger: CCTGCGGCCCGTCAGCTTCGCCATGGAGGCCGAGCGGCCGGAGCACCCGCTGCAGCCGCTGCCCAAGAGCGCTACGTCGCCGGCGGGCAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS TCA 90 bp GGCGTGGGGCCACGCCGTCGGCTGGCGGCGCACGCGGGAACTCTTTaGGAGAGCGGCTCAGCGGCTTGGCCTTGCCGTGCGCCTGCGCCG +
Preference number: 5 (lower is better)
Translates to: GVGPRRRLAAHAGTL*ESGSAAWPCRAPAP
Trigger: CGGCGCAGGCGCACGGCAAGGCCAAGCCGCTGAGCCGCTCTCTCAAAGAGTTCCCGCGTGCGCCGCCAGCCGACGGCGTGGCCCCACGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 90 bp GCGCTGCTGCTGCCCGCCGGCGACGTAGCGCTCTTGGGCAGCGGCTaGAGCGGGTGCTCCGGCCGCTCGGCCTCCATGGCGAAGCTGACG +
Preference number: 5 (lower is better)
Translates to: ALLLPAGDVALLGSG*SGCSGRSASMAKLT
Trigger: CGTCAGCTTCGCCATGGAGGCCGAGCGGCCGGAGCACCCGCTGCAGCCGCTGCCCAAGAGCGCTACGTCGCCGGCGGGCAGCAGCAGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 90 bp ATCTCCGGGATGGCCTGCAGGGGCCCGGCCAGCGCCTTCACGTCCTaGTCGGCCGCGCAGAACTGCGTCGGTGCCAGAAGGCTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: ISGMACRGPASAFTS*SAAQNCVGARRLSG
Trigger: GCCCGAGAGCCTTCTGGCACCGACGCAGTTCTGCGCGGCCGAGCAGGACGTGAAGGCGCTGGCCGGGCCCCTGCAGGCCATCCCGGAGAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
CDS GCA 90 bp GCCGCGCAGAACTGCGTCGGTGCCAGAAGGCTCTCGGGCCGCTCGTaGTTCCTGCCCTCCAGCTCCCAGTCACTGGGCTTCCCGGGCTGC +
Preference number: 5 (lower is better)
Translates to: AAQNCVGARRLSGRS*FLPSSSQSLGFPGC
Trigger: GCAGCCCGGGAAGCCCAGTGACTGGGAGCTGGAGGGCAGGAAGCACGAGCGGCCCGAGAGCCTTCTGGCACCGACGCAGTTCTGCGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
CDS CCA 90 bp GCTGCTGCTGCGCGTGCTGTAGAGGCGTGGGGCCACGCCGTCGGCTaGCGGCGCACGCGGGAACTCTTTGAGAGAGCGGCTCAGCGGCTT +
Preference number: 5 (lower is better)
Translates to: AAAARAVEAWGHAVG*RRTRELFERAAQRL
Trigger: AAGCCGCTGAGCCGCTCTCTCAAAGAGTTCCCGCGTGCGCCGCCAGCCGACGGCGTGGCCCCACGCCTCTACAGCACGCGCAGCAGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACCTCAGCGGCTTGGCCTaGCCGTGCGCCTGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHLSGLA*PCACAA
Trigger: GGCGGCGCAGGCGCACGGCAAGGCCAAGCCGCTGAG...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAGGGAGCGCTCCACGTaGCCCAGCGGCTCCGCCGGA +
Preference number: 5 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKRERST*PSGSAG
Trigger: TCCGGCGGAGCCGCTGGGCAACGTGGAGCGCTCCCT...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCCTCAGCGGCTTGGCCTaGCCGTGCGCCTGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: HFITPEPGRPRCNLIPLSLSGLA*PCACAA
Trigger: GGCGGCGCAGGCGCACGGCAAGGCCAAGCCGCTGAG...GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGGAGCGGCTCAGCGGCTaGGCCTTGCCGTGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKERLSG*ALPCAC
Trigger: GCAGGCGCACGGCAAGGCCAAGCCGCTGAGCCGCTC...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CCA 90 bp CTTCTGAGTGGATCCCAGTGTCACGGACAGCCTCAGGACCTGCAGTaGGGGAAGCATCTTGCCCAGCATTGGCACACTGGGAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LLSGSQCHGQPQDLQ*GKHLAQHWHTGKPA
Trigger: GGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCACTGCAGGTCCTGAGGCTGTCCGTGACACTGGGATCCACTCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
ENST00000486958.5
CDS TCA 90 bp AGGGCCAGAACTGGGAGCAGAAGGGTAGGGTTGCAGCAACTCTTCTaGGTGGATCCCAGTGTCACGGACAGCCTCAGGACCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: RARTGSRRVGLQQLF*VDPSVTDSLRTCSG
Trigger: CCCACTGCAGGTCCTGAGGCTGTCCGTGACACTGGGATCCACTCAGAAGAGTTGCTGCAACCCTACCCTTCTGCTCCCAGTTCTGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
ENST00000486958.5
CDS GCA 90 bp CCAGTGTCACGGACAGCCTCAGGACCTGCAGTGGGGGAAGCATCTTaGCCAGCATTGGCACACTGGGAAGCCAGCCCTTTGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: PVSRTASGPAVGEAS*PALAHWEASPLYSF
Trigger: GAAGCTGTACAAAGGGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCACTGCAGGTCCTGAGGCTGTCCGTGACACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000486958.5
CDS CCA 90 bp CTGGGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTTGCTGCTGTTaGCTTTTCTTCACTGGGGGCATCAGATGTCACCTGCGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: LGFPGCMLSIRLCCC*LFFTGGIRCHLRCS
Trigger: GGAGCACCGCAGGTGACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483305.1
CDS TCA 90 bp AGAACGCCTTGGCGTGGCCACTTCAGGACCCTTTCCTGCAGTGCGTaGAGCAGATCCAGGTGCTGCTGGACGAGGTACCGTAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: RTPWRGHFRTLSCSA*SRSRCCWTRYRKEP
Trigger: TGGCTCTTTACGGTACCTCGTCCAGCAGCACCTGGATCTGCTTCACGCACTGCAGGAAAGGGTCCTGAAGTGGCCACGCCAAGGCGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 90 bp CAGTCACTGGGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTTGCTaGTGTTGGCTTTTCTTCACTGGGGGCATCAGATGTCACCTGCGG +
Preference number: 5 (lower is better)
Translates to: QSLGFPGCMLSIRLC*CWLFFTGGIRCHLR
Trigger: CCGCAGGTGACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAGTGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483305.1
CDS CCA 90 bp CTGGGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTTGCTGCTGTTaGCTTTTCTTCACTGGGGGCATCAGATGTGTGATGGCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: LGFPGCMLSIRLCCC*LFFTGGIRCVMAGP
Trigger: TGGCCCTGCCATCACACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 90 bp TCCCAGTCACTGGGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTTaGTGCTGTTGGCTTTTCTTCACTGGGGGCATCAGATGTCACCTG +
Preference number: 5 (lower is better)
Translates to: SQSLGFPGCMLSIRL*CCWLFFTGGIRCHL
Trigger: CAGGTGACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAGTGACTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483305.1
CDS GCA 90 bp CAGTCACTGGGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTTGCTaGTGTTGGCTTTTCTTCACTGGGGGCATCAGATGTGTGATGGCA +
Preference number: 5 (lower is better)
Translates to: QSLGFPGCMLSIRLC*CWLFFTGGIRCVMA
Trigger: TGCCATCACACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAGTGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 90 bp TCCCAGTCACTGGGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTTaGTGCTGTTGGCTTTTCTTCACTGGGGGCATCAGATGTGTGATG +
Preference number: 5 (lower is better)
Translates to: SQSLGFPGCMLSIRL*CCWLFFTGGIRCVM
Trigger: CATCACACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAGTGACTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CCA 90 bp TCAGGACCTGCAGTGGGGGAAGCATCTTGCCCAGCATTGGCACACTaGGAAGCCAGCCCTTTGTACAGCTTCGCCATGGATGACTTCTTG +
Preference number: 5 (lower is better)
Translates to: SGPAVGEASCPALAH*EASPLYSFAMDDFL
Trigger: CAAGAAGTCATCCATGGCGAAGCTGTACAAAGGGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCACTGCAGGTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CCA 90 bp TCAGGACCTGCAGTGGGGGAAGCATCTTGCCCAGCATTGGCACACTaGGAAGCCAGCCCTTTGTACAGCTTCGCCATGGATGACCTAACA +
Preference number: 5 (lower is better)
Translates to: SGPAVGEASCPALAH*EASPLYSFAMDDLT
Trigger: TGTTAGGTCATCCATGGCGAAGCTGTACAAAGGGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCACTGCAGGTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486958.5
CDS-3UTR CAA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACCTGCTTCTGGAGTTGTaGGGTTCACTCCAGGACCCA +
Preference number: 5 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHLLLEL*GSLQDP
Trigger: TGGGTCCTGGAGTGAACCCAACAACTCCAGAAGCAG...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACGCCAGGCAGGCCTCGTaGCAATCTGATTCCTCTAAG +
Preference number: 5 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHARQAS*QSDSSK
Trigger: CTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGC...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCACGAAAAGGACTTCCTaGTGCTTGGGCAGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: HFITPEPGRPRCNLIPLSTKRTS*CLGRPG
Trigger: GCCGGGCCTGCCCAAGCACAAGGAAGTCCTTTTCGT...GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTAGGGAGCGCTCCACGTaGCCCAGCGGCTCCGCCGGA +
Preference number: 5 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIRERST*PSGSAG
Trigger: TCCGGCGGAGCCGCTGGGCAACGTGGAGCGCTCCCT...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACGCCGAGAGGCAAGACTaGAGGTTTTCTTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHAERQD*RFSSAS
Trigger: AGAAGCAGAAGAAAACCTCAAGTCTTGCCTCTCGGC...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGAGATGGGAGATGGCCCTaGGACTGGATATCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRDGRWP*DWISAE
Trigger: CTCGGCTGATATCCAGTCCAAGGGCCATCTCCCATC...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGACCCTGGCCAGCCTCCTaGAGTTTATCTGGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRPWPAS*SLSGWS
Trigger: AGACCACCCAGATAAACTCAAGGAGGCTGGCCAGGG...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACGCTCTCCATCAGGCTTaGCTGCTGTTGGCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHALHQA*LLLAFL
Trigger: AAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGC...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTAGAGCGGCTCAGCGGCTaGGCCTTGCCGTGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLERLSG*ALPCAC
Trigger: GCAGGCGCACGGCAAGGCCAAGCCGCTGAGCCGCTC...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTGCACGCGGGAACTCTTaGAGAGAGCGGCTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTARGNS*RERLSG
Trigger: GCCGCTGAGCCGCTCTCTCAAAGAGTTCCCGCGTGC...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGCCACGTCCAGTCGATTaGGCGTTGTGCTTGCAAGCA +
Preference number: 5 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKPRPVD*ALCLQA
Trigger: TGCTTGCAAGCACAACGCCAAATCGACTGGACGTGG...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CCA 90 bp TCCTTAGGCTGCCTCCACATGCCAGATGGGAGATGGCCCTTGGACTaGATATCAGCCGAGAGGCAAGACTTGAGGTTTTCTTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SLGCLHMPDGRWPLD*ISAERQDLRFSSAS
Trigger: AGAAGCAGAAGAAAACCTCAAGTCTTGCCTCTCGGCTGATATCCAGTCCAAGGGCCATCTCCCATCTGGCATGTGGAGGCAGCCTAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CCA 90 bp TTCACCCCATTCTTTACCATCCTTAGGCTGCCTCCACATGCCAGATaGGAGATGGCCCTTGGACTGGATATCAGCCGAGAGGCAAGACTT +
Preference number: 5 (lower is better)
Translates to: FTPFFTILRLPPHAR*EMALGLDISREARL
Trigger: AAGTCTTGCCTCTCGGCTGATATCCAGTCCAAGGGCCATCTCCCATCTGGCATGTGGAGGCAGCCTAAGGATGGTAAAGAATGGGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGGATGGGAGATGGCCCTaGGACTGGATATCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLDGRWP*DWISAE
Trigger: CTCGGCTGATATCCAGTCCAAGGGCCATCTCCCATC...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGATCTCCAAGAACGCCTaGGCGTGGCCACTTCAGGAC +
Preference number: 5 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLISKNA*AWPLQD
Trigger: GTCCTGAAGTGGCCACGCCAAGGCGTTCTTGGAGAT...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACCTTGGTCAAGGTCATTaGCAAGAGCAAGTCGGTTTC +
Preference number: 5 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHLGQGH*QEQVGF
Trigger: GAAACCGACTTGCTCTTGCAAATGACCTTGACCAAG...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCCAGTCGATTTGGCGTaGTGCTTGCAAGCACTGCCG +
Preference number: 5 (lower is better)
Translates to: NRAHFITPEPGRPRCNLIPVDLA*CLQALP
Trigger: CGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGG...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS TCA 90 bp ATGGGAGATGGCCCTTGGACTGGATATCAGCCGAGAGGCAAGACTTaGGGTTTTCTTCTGCTTCTGGAGTTGTTGGGTTCACTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: MGDGPWTGYQPRGKT*GFLLLLELLGSLQD
Trigger: GTCCTGGAGTGAACCCAACAACTCCAGAAGCAGAAGAAAACCTCAAGTCTTGCCTCTCGGCTGATATCCAGTCCAAGGGCCATCTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGCTGCTTCTGGAGTTGTaGGGTTCACTCCAGGACCCA +
Preference number: 5 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLLLLEL*GSLQDP
Trigger: TGGGTCCTGGAGTGAACCCAACAACTCCAGAAGCAG...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACCTGTTGCATTTCTTCTaGTTTGGAAGTGATGGCTTG +
Preference number: 5 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHLLHFF*FGSDGL
Trigger: CAAGCCATCACTTCCAAACAAGAAGAAATGCAACAG...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACACAGGCTCAGGGATATaGATAGAACGAAAAGGACTT +
Preference number: 5 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHTGSGI*IERKGL
Trigger: AAGTCCTTTTCGTTCTATCAATATCCCTGAGCCTGT...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAACAGATCTGGACTCTaGGGCTTTCTCGTAGGCCTG +
Preference number: 5 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLNRSGL*GFLVGL
Trigger: CAGGCCTACGAGAAAGCCCAAGAGTCCAGATCTGTT...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTCCCTGGCCAGCCTCCTaGAGTTTATCTGGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTPWPAS*SLSGWS
Trigger: AGACCACCCAGATAAACTCAAGGAGGCTGGCCAGGG...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCAGTGGGGGAAGCATCTaGCCCAGCATTGGCACACTG +
Preference number: 5 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLSGGSI*PSIGTL
Trigger: CAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCACT...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTAGTGGGGGAAGCATCTaGCCCAGCATTGGCACACTG +
Preference number: 5 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTSGGSI*PSIGTL
Trigger: CAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCACT...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGGGTCTGTTTTTCGCTTaGGGACCTCTGTTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLGLFFA*GPLLGE
Trigger: TTCCCCCAACAGAGGTCCCAAAGCGAAAAACAGACC...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACCTGAAGAAATCTTGTTaGGTGGGTGAAGGATCCATT +
Preference number: 5 (lower is better)
Translates to: SLSTSSRFGVVLASTAGHLKKSC*VGEGSI
Trigger: AATGGATCCTTCACCCACCAAACAAGATTTCTTCAG...GTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTGGAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTCAGATCAGTCCATTTGAGTCCCCAGTCGAGGGTGCATTCTTCCTTTATCTTGCTCAGATCAGTCCATTaGAGTCCCCAGTCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: LRSVHLSPQSRVHSSFILLRSVH*SPQSRV
Trigger: CACCCTCGACTGGGGACTCAAATGGACTGATCTGAG...CAAGATAAAGGAAGAATGCACCCTCGACTGGGGACTCAAATGGACTGATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR CAA 90 bp CACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGTTTGGAAGTGATGGCTaGGATCATCGACATGGCATT +
Preference number: 5 (lower is better)
Translates to: HVQSIWRCACKHCRPHNKFGSDG*DHRHGI
Trigger: AATGCCATGTCGATGATCCAAGCCATCACTTCCAAA...CTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTTGGGAAGCCAGCCCTTaGTACAGCTTCGCCATGGAT +
Preference number: 5 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTWEASP*YSFAMD
Trigger: ATCCATGGCGAAGCTGTACAAAGGGCTGGCTTCCCA...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp ATTGTGACTTCTGTAGTATTTCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCGATTTGGCGTTGTGCTaGCAAGCACTGCCGGCCACA +
Preference number: 5 (lower is better)
Translates to: IVTSVVFHFPRPVDLALCDLALC*QALPAT
Trigger: TGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATC...GCACAACGCCAAATCGACTGGACGTGGAAAGTGAAATACTACAGAAGTCACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTCCACGTCCAGTCGATTaGGCGTTGTGCTTGCAAGCA +
Preference number: 5 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTPRPVD*ALCLQA
Trigger: TGCTTGCAAGCACAACGCCAAATCGACTGGACGTGG...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS TCA 90 bp TTTAATGATGTCAACTTGACTCTCCCTTTTGAATCCTTGTGGGTATaGGCCTTCGGCCCTCCCAGCCTCAGAGGGAAGAGAACCCTTTCT +
Preference number: 5 (lower is better)
Translates to: FNDVNLTLPFESLWV*AFGPPSLRGKRTLS
Trigger: AGAAAGGGTTCTCTTCCCTCTGAGGCTGGGAGGGCCGAAGGCTCATACCCACAAGGATTCAAAAGGGAGAGTCAAGTTGACATCATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430382.1
CDS TCA 90 bp ATTGGCACACTGGGAAGCCAGCCCTTTGTACAGCTTCGCCATGGATaGCCTAACAGAATGGAAATAACAGTTCTCAGGTTGTACAGTGGC +
Preference number: 5 (lower is better)
Translates to: IGTLGSQPFVQLRHG*PNRMEITVLRLYSG
Trigger: GCCACTGTACAACCTGAGAACTGTTATTTCCATTCTGTTAGGTCATCCATGGCGAAGCTGTACAAAGGGCTGGCTTCCCAGTGTGCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486958.5
CDS GCA 90 bp CTTGGACTGGATATCAGCCGAGAGGCAAGACTTGAGGTTTTCTTCTaGTTCTGGAGTTGTTGGGTTCACTCCAGGACCCATCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: LGLDISREARLEVFF*FWSCWVHSRTHHSF
Trigger: AAAGGAATGATGGGTCCTGGAGTGAACCCAACAACTCCAGAAGCAGAAGAAAACCTCAAGTCTTGCCTCTCGGCTGATATCCAGTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 90 bp TCTTTTGTGACGTATTCTTCACCCCATTCTTTACCATCCTTAGGCTaGCTCCACATGCCAGATGGGAGATGGCCCTTGGACTGGATATCA +
Preference number: 5 (lower is better)
Translates to: SFVTYSSPHSLPSLG*LHMPDGRWPLDWIS
Trigger: TGATATCCAGTCCAAGGGCCATCTCCCATCTGGCATGTGGAGGCAGCCTAAGGATGGTAAAGAATGGGGTGAAGAATACGTCACAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 90 bp TGCGGTGCTCCAAGGCACACCTTCAACTCTCTTCTCTCCCTTGCTTaGCCTAGCAGAGTCATACGGAATAATGGAAAACTCAACTTCTGT +
Preference number: 5 (lower is better)
Translates to: CGAPRHTFNSLLSLA*PSRVIRNNGKLNFC
Trigger: ACAGAAGTTGAGTTTTCCATTATTCCGTATGACTCTGCTAGGGCAAGCAAGGGAGAGAAGAGAGTTGAAGGTGTGCCTTGGAGCACCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483305.1
CDS CCA 90 bp TTCCAAGGAGCTGTGTCTACCCTGGCCAGCCTCCTTGAGTTTATCTaGGTGGTCTTTTGTGACGTATTCTTCACCCCATTCTTTACCATC +
Preference number: 5 (lower is better)
Translates to: FQGAVSTLASLLEFI*VVFCDVFFTPFFTI
Trigger: GATGGTAAAGAATGGGGTGAAGAATACGTCACAAAAGACCACCCAGATAAACTCAAGGAGGCTGGCCAGGGTAGACACAGCTCCTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTTCTTCGCTTCTCCTGTaGAAGCTGCTCGATTTTCTG +
Preference number: 5 (lower is better)
Translates to: NRAHFITPEPGRPRCNLISSLLL*KLLDFL
Trigger: CAGAAAATCGAGCAGCTTCAACAGGAGAAGCGAAGA...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCCTTCTGCTTCTGGAGTaGTTGGGTTCACTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLLLLLE*LGSLQD
Trigger: GTCCTGGAGTGAACCCAACAACTCCAGAAGCAGAAG...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp ATTGTGACTTCTGTAGTATTTCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCTGGGAAGCCAGCCCTTaGTACAGCTTCGCCATGGAT +
Preference number: 5 (lower is better)
Translates to: IVTSVVFHFPRPVDLALCWEASP*YSFAMD
Trigger: ATCCATGGCGAAGCTGTACAAAGGGCTGGCTTCCCA...GCACAACGCCAAATCGACTGGACGTGGAAAGTGAAATACTACAGAAGTCACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TACACAGCTGTTCCTTGGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGGGTCTGTTTTTCGCTTaGGGACCTCTGTTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: YTAVPWSRSFARASRFLKGLFFA*GPLLGE
Trigger: TTCCCCCAACAGAGGTCCCAAAGCGAAAAACAGACC...CTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAGGAACAGCTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR CAA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGATTCTTTTTAAAGAGCTaGCGGAAGGAGCTGCGAAAG +
Preference number: 5 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRFFLKS*RKELRK
Trigger: CTTTCGCAGCTCCTTCCGCAAGCTCTTTAAAAAGAA...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCAGGATGCTGACCATCTaGCACATATCCATGTGGAAA +
Preference number: 5 (lower is better)
Translates to: HFITPEPGRPRCNLIPLSRMLTI*HISMWK
Trigger: TTTCCACATGGATATGTGCAAGATGGTCAGCATCCT...GCTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTGATTTGGCGTTGTGCTaGCAAGCACTGCCGGCCACA +
Preference number: 5 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIDLALC*QALPAT
Trigger: TGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATC...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CCA 90 bp AAGGAGCTGTGTCTACCCTGGCCAGCCTCCTTGAGTTTATCTGGGTaGTCTTTTGTGACGTATTCTTCACCCCATTCTTTACCATCCTTA +
Preference number: 5 (lower is better)
Translates to: KELCLPWPASLSLSG*SFVTYSSPHSLPSL
Trigger: TAAGGATGGTAAAGAATGGGGTGAAGAATACGTCACAAAAGACCACCCAGATAAACTCAAGGAGGCTGGCCAGGGTAGACACAGCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCACGAAAAGGACTTCCTaGTGCTTGGGCAGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCTKRTS*CLGRPG
Trigger: GCCGGGCCTGCCCAAGCACAAGGAAGTCCTTTTCGT...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGGAAGTTTTGGTGCTATaGCCACCTTCTTTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLEVLVL*PPSFQA
Trigger: AGCCTGAAAAGAAGGTGGCAATAGCACCAAAACTTC...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCTGTTGCATTTCTTCTaGTTTGGAAGTGATGGCTTG +
Preference number: 5 (lower is better)
Translates to: NRAHFITPEPGRPRCNLILLHFF*FGSDGL
Trigger: CAAGCCATCACTTCCAAACAAGAAGAAATGCAACAG...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGCAAATCTTCATTGCATaGAAACAGCAGGGTGTAGTG +
Preference number: 5 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLQIFIA*KQQGVV
Trigger: CACTACACCCTGCTGTTTCAATGCAATGAAGATTTG...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTCAGATCAGTCCATTTGAGTCCCCAGTCGAGGGTGCATTCTTCCTTTATCTTGGTCTTGCCTGGGATTTaGATCGCTGAAAGATGTTTG +
Preference number: 5 (lower is better)
Translates to: LRSVHLSPQSRVHSSFILVLPGI*IAERCL
Trigger: CAAACATCTTTCAGCGATCAAAATCCCAGGCAAGAC...CAAGATAAAGGAAGAATGCACCCTCGACTGGGGACTCAAATGGACTGATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR CAA 90 bp GTAATCCATTCCAGCTCTGCACCTTCTCCAGTTTTCTCATGTCAGAAGTCCCTGTTCTTTTTAAAGAGCTaGCGGAAGGAGCTGCGAAAG +
Preference number: 5 (lower is better)
Translates to: VIHSSSAPSPVFSCQKSLFFLKS*RKELRK
Trigger: CTTTCGCAGCTCCTTCCGCAAGCTCTTTAAAAAGAA...CAGGGACTTCTGACATGAGAAAACTGGAGAAGGTGCAGAGCTGGAATGGATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR CAA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTGCTGTGTGTGAGCCATaGAAGTTTTGGTGCTATTGC +
Preference number: 5 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTAVCEP*KFWCYC
Trigger: GCAATAGCACCAAAACTTCAATGGCTCACACACAGC...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGACAAGGAGAAGAAAACTaGCAACACTTACATGTGAAC +
Preference number: 5 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRQGEEN*QHLHVN
Trigger: GTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTG...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCCAGTCGATTTGGCGTaGTGCTTGCAAGCACTGCCG +
Preference number: 5 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCPVDLA*CLQALP
Trigger: CGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGG...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTTCCTTTATCTTGCTTAAGCCACTTGGGTAATCCATTCCAGCTCTGCACCTTCTCTTGCTTAAGCCACTaGGGTAATCCATTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LPLSCLSHLGNPFQLCTFSCLSH*GNPFQL
Trigger: GAGCTGGAATGGATTACCCAAGTGGCTTAAGCAAGA...GAAGGTGCAGAGCTGGAATGGATTACCCAAGTGGCTTAAGCAAGATAAAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS TCA 90 bp AGAGCCAGGGAAGAGGCTTCTCTCTTTGGAATTCCTCTTTCCATCTaGCCCCTGGAATGTGGCTTTTATCTTCAAGATCAGAGAGATGTT +
Preference number: 5 (lower is better)
Translates to: RAREEASLFGIPLSI*PLECGFYLQDQRDV
Trigger: AACATCTCTCTGATCTTGAAGATAAAAGCCACATTCCAGGGGTCAGATGGAAAGAGGAATTCCAAAGAGAGAAGCCTCTTCCCTGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CCA 90 bp TTTCTCGTAGGCCTGAGAAGGCAAAAGGTTGGTAAAGTCTTCGCTTaGAAGAACAGGCTCAGGGATATTGATAGAACGAAAAGGACTTCC +
Preference number: 5 (lower is better)
Translates to: FLVGLRRQKVGKVFA*KNRLRDIDRTKRTS
Trigger: GGAAGTCCTTTTCGTTCTATCAATATCCCTGAGCCTGTTCTTCCAAGCGAAGACTTTACCAACCTTTTGCCTTCTCAGGCCTACGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1
CDS-3UTR CAA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTATCATCGACATGGCATaGCTCAGCTCTTCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTIIDMA*LSSSLK
Trigger: TTTCAAGGAAGAGCTGAGCAATGCCATGTCGATGAT...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTAGTCCATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGGCTGTGCTCTTCTTTTaGAGTTTTCTTGGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: LVHLVVSVCDTQDHEWVLAVLFF*SFLGFN
Trigger: GTTAAAGCCAAGAAAACTCAAAAAGAAGAGCACAGC...CAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATGGACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp AACAGAGCACATTTTATCACCCCAGAGCCAGGCAGGCCTCGTTGCAATCTGATTCTTTCTCTTTCTTCTTaGGGACAGAATCTGGTAGTA +
Preference number: 5 (lower is better)
Translates to: NRAHFITPEPGRPRCNLILSLSS*GQNLVV
Trigger: TACTACCAGATTCTGTCCCAAAGAAGAAAGAGAAAG...AATCAGATTGCAACGAGGCCTGCCTGGCTCTGGGGTGATAAAATGTGCTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CACAGCTGTTCCTTGGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAATTCTTTTTAAAGAGCTaGCGGAAGGAGCTGCGAAAG +
Preference number: 5 (lower is better)
Translates to: HSCSLVKVICKSKSVSEEFFLKS*RKELRK
Trigger: CTTTCGCAGCTCCTTCCGCAAGCTCTTTAAAAAGAA...TTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAGGAACAGCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR CAA 90 bp TTACACAGCTGTTCCTTGGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAACTTGGTCAAGGTCATTaGCAAGAGCAAGTCGGTTTC +
Preference number: 5 (lower is better)
Translates to: LHSCSLVKVICKSKSVSELGQGH*QEQVGF
Trigger: GAAACCGACTTGCTCTTGCAAATGACCTTGACCAAG...TTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAGGAACAGCTGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR CAA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACAGCCAGGCAGGCCTCGTaGCAATCTGATTCCTCTAAG +
Preference number: 5 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTARQAS*QSDSSK
Trigger: CTTAGAGGAATCAGATTGCAACGAGGCCTGCCTGGC...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp ACGTCCAGTCGATTTGGCGTTGTGCTTGCAAGCACTGCCGGCCACATAATAAGATCTGAAGACACCAGTTaGAGTACCAAGATTTTGAAT +
Preference number: 5 (lower is better)
Translates to: TSSRFGVVLASTAGHIIRSEDTS*STKILN
Trigger: ATTCAAAATCTTGGTACTCAAACTGGTGTCTTCAGA...TCTTATTATGTGGCCGGCAGTGCTTGCAAGCACAACGCCAAATCGACTGGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CGGTTTCTGAAGAAATCTTGTTTGGTGGGTGAAGGATCCATTGAGGGATTCTCAGAAAATAGGAAAGCTTaGATGTCACCACCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: RFLKKSCLVGEGSIEGFSENRKA*MSPPAP
Trigger: TGGGGCTGGTGGTGACATCAAAGCTTTCCTATTTTC...TGAGAATCCCTCAATGGATCCTTCACCCACCAAACAAGATTTCTTCAGAAACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR CAA 90 bp AGCTCTGCACCTTCTCCAGTTTTCTCATGTCAGAAGTCCCTGAAAATAGGAAAGGAAAATAGGAAAGCTTaGATGTCACCACCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: SSAPSPVFSCQKSLKIGKENRKA*MSPPAP
Trigger: TGGGGCTGGTGGTGACATCAAAGCTTTCCTATTTTC...CTTTCCTATTTTCAGGGACTTCTGACATGAGAAAACTGGAGAAGGTGCAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS GCA 90 bp TCTCTTCATCACCCTCTTTCAGGACTACAACATGAACCAATGAGATaGACTCAGGCAGGTCCCTTAGGTAGGCAACATAATAATCCAAGA +
Preference number: 5 (lower is better)
Translates to: SLHHPLSGLQHEPMR*TQAGPLGRQHNNPR
Trigger: TCTTGGATTATTATGTTGCCTACCTAAGGGACCTGCCTGAGTGCATCTCATTGGTTCATGTTGTAGTCCTGAAAGAGGGTGATGAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp ATTGTGACTTCTGTAGTATTTCACTTTCCACGTCCAGTCGATTTGGCGTTGTGCATCATCGACATGGCATaGCTCAGCTCTTCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: IVTSVVFHFPRPVDLALCIIDMA*LSSSLK
Trigger: TTTCAAGGAAGAGCTGAGCAATGCCATGTCGATGAT...GCACAACGCCAAATCGACTGGACGTGGAAAGTGAAATACTACAGAAGTCACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTACAGGCTCAGGGATATaGATAGAACGAAAAGGACTT +
Preference number: 5 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTTGSGI*IERKGL
Trigger: AAGTCCTTTTCGTTCTATCAATATCCCTGAGCCTGT...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACAATCTCCAAGAACGCCTaGGCGTGGCCACTTCAGGAC +
Preference number: 5 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTISKNA*AWPLQD
Trigger: GTCCTGAAGTGGCCACGCCAAGGCGTTCTTGGAGAT...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTCAAATCTTCATTGCATaGAAACAGCAGGGTGTAGTG +
Preference number: 5 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTQIFIA*KQQGVV
Trigger: CACTACACCCTGCTGTTTCAATGCAATGAAGATTTG...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTCAGATCAGTCCATTTGAGTCCCCAGTCGAGGGTGCATTCTTCCTTTATCTTGCTTTCTCTTTCTTCTTaGGGACAGAATCTGGTAGTA +
Preference number: 5 (lower is better)
Translates to: LRSVHLSPQSRVHSSFILLSLSS*GQNLVV
Trigger: TACTACCAGATTCTGTCCCAAAGAAGAAAGAGAAAG...CAAGATAAAGGAAGAATGCACCCTCGACTGGGGACTCAAATGGACTGATCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR CAA 90 bp GGCAGGCCTCGTTGCAATCTGATTCCTCTAAGCTTTAAGAGCTTGGTTTCTTTATTACACAGCTGTTCCTaGGTCAAGGTCATTTGCAAG +
Preference number: 5 (lower is better)
Translates to: GRPRCNLIPLSFKSLVSLLHSCS*VKVICK
Trigger: CTTGCAAATGACCTTGACCAAGGAACAGCTGTGTAA...TAAAGAAACCAAGCTCTTAAAGCTTAGAGGAATCAGATTGCAACGAGGCCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp GTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCTTGTTTGGTGGGTTACACAGCTGTTCCTaGGTCAAGGTCATTTGCAAG +
Preference number: 5 (lower is better)
Translates to: VKVICKSKSVSEEILFGGLHSCS*VKVICK
Trigger: CTTGCAAATGACCTTGACCAAGGAACAGCTGTGTAA...CCCACCAAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR CAA 90 bp TTTCCATCCTCAGCTCAACCCACACAAGGGAAAATGTTTCTTTGCCTTCCTCTCATTGCCTTAGGGTTTTaGGAAGACATGAAGCAAGAC +
Preference number: 5 (lower is better)
Translates to: FPSSAQPTQGKMFLCLPLIALGF*EDMKQD
Trigger: GTCTTGCTTCATGTCTTCCAAAAACCCTAAGGCAAT...GAGAGGAAGGCAAAGAAACATTTTCCCTTGTGTGGGTTGAGCTGAGGATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CCA 90 bp GGGAAGAGGCTTCTCTCTTTGGAATTCCTCTTTCCATCTGACCCCTaGAATGTGGCTTTTATCTTCAAGATCAGAGAGATGTTAATGACA +
Preference number: 5 (lower is better)
Translates to: GKRLLSLEFLFPSDP*NVAFIFKIREMLMT
Trigger: TGTCATTAACATCTCTCTGATCTTGAAGATAAAAGCCACATTCCAGGGGTCAGATGGAAAGAGGAATTCCAAAGAGAGAAGCCTCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCGCTCTCCATCAGGCTTaGCTGCTGTTGGCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCALHQA*LLLAFL
Trigger: AAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGC...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTGAAGTTTTGGTGCTATaGCCACCTTCTTTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIEVLVL*PPSFQA
Trigger: AGCCTGAAAAGAAGGTGGCAATAGCACCAAAACTTC...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CATCTGGTTGTGAGTGTGTGTGACACTCAAGATCACGAGTGGGTCTTGAATACTCAAGGAGAAGAAAACTaGCAACACTTACATGTGAAC +
Preference number: 5 (lower is better)
Translates to: HLVVSVCDTQDHEWVLNTQGEEN*QHLHVN
Trigger: GTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTG...AGTATTCAAGACCCACTCGTGATCTTGAGTGTCACACACACTCACAACCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTCAGATCAGTCCATTTGAGTCCCCAGTCGAGGGTGCATTCTTCCTTTATCTTGAGAAATCTTCACCAGTaGCGTTCCCATTTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: LRSVHLSPQSRVHSSFILRNLHQ*RSHFSF
Trigger: AAAAGAAAAATGGGAACGCAACTGGTGAAGATTTCT...CAAGATAAAGGAAGAATGCACCCTCGACTGGGGACTCAAATGGACTGATCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR CAA 90 bp GGTAATCCATTCCAGCTCTGCACCTTCTCCAGTTTTCTCATGTCAGAAGTCCCTCGTACAGTAATCAGATaGCAGAGATACTATAATCTC +
Preference number: 5 (lower is better)
Translates to: GNPFQLCTFSSFLMSEVPRTVIR*QRYYNL
Trigger: GAGATTATAGTATCTCTGCAATCTGATTACTGTACG...AGGGACTTCTGACATGAGAAAACTGGAGAAGGTGCAGAGCTGGAATGGATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR CAA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTATTTGGAAGTGATGGCTaGGATCATCGACATGGCATT +
Preference number: 5 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLFGSDG*DHRHGI
Trigger: AATGCCATGTCGATGATCCAAGCCATCACTTCCAAA...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CAGACAACTACTATTCAAAACGCAGTAGGTGAGTTCCTAATTTGTCATCAGACATCTTCGCTTCTCCTGTaGAAGCTGCTCGATTTTCTG +
Preference number: 5 (lower is better)
Translates to: QTTTIQNAVGEFLICHQTSSLLL*KLLDFL
Trigger: CAGAAAATCGAGCAGCTTCAACAGGAGAAGCGAAGA...TGTCTGATGACAAATTAGGAACTCACCTACTGCGTTTTGAATAGTAGTTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGAACAGATCTGGACTCTaGGGCTTTCTCGTAGGCCTG +
Preference number: 5 (lower is better)
Translates to: FFYYKSDVWGISRMLTILNRSGL*GFLVGL
Trigger: CAGGCCTACGAGAAAGCCCAAGAGTCCAGATCTGTT...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGCTTCTGCTTCTGGAGTaGTTGGGTTCACTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: FFYYKSDVWGISRMLTILLLLLE*LGSLQD
Trigger: GTCCTGGAGTGAACCCAACAACTCCAGAAGCAGAAG...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACAGGTCTGTTTTTCGCTTaGGGACCTCTGTTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTGLFFA*GPLLGE
Trigger: TTCCCCCAACAGAGGTCCCAAAGCGAAAAACAGACC...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CTACATTTGGTAGAATGCAGAAATTCGTACAGTAATCAGATTGCAGAGATACTAGGTCTGTTTTTCGCTTaGGGACCTCTGTTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: LHLVECRNSYSNQIAEILGLFFA*GPLLGE
Trigger: TTCCCCCAACAGAGGTCCCAAAGCGAAAAACAGACC...TAGTATCTCTGCAATCTGATTACTGTACGAATTTCTGCATTCTACCAAATGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS-3UTR CAA 90 bp CTGAAGAAATCTTGTTTGGTGGGTGAAGGATCCATTGAGGGATTCTCATTAGTTGTCTTGCCTGGGATTTaGATCGCTGAAAGATGTTTG +
Preference number: 5 (lower is better)
Translates to: LKKSCLVGEGSIEGFSLVVLPGI*IAERCL
Trigger: CAAACATCTTTCAGCGATCAAAATCCCAGGCAAGAC...AACTAATGAGAATCCCTCAATGGATCCTTCACCCACCAAACAAGATTTCTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR CAA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTCTGAAGAAATCTTGTTaGGTGGGTGAAGGATCCATT +
Preference number: 5 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLILKKSC*VGEGSI
Trigger: AATGGATCCTTCACCCACCAAACAAGATTTCTTCAG...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTTGGTCAAGGTCATTaGCAAGAGCAAGTCGGTTTC +
Preference number: 5 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCLGQGH*QEQVGF
Trigger: GAAACCGACTTGCTCTTGCAAATGACCTTGACCAAG...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp GTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCCTATGCATTTCTTCTTGTTaGGAAGTGATGGCTTGGATC +
Preference number: 5 (lower is better)
Translates to: VIRQGEENLQHLHVNLCLCISSC*EVMAWI
Trigger: GATCCAAGCCATCACTTCCAAACAAGAAGAAATGCA...TAGGCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTGCCTTCCTCTCTCCCCAGTTTCTACAGAAATCCTTGTTCCCTTTACTGATTGCTGTGCTCTTCTTTTaGAGTTTTCTTGGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: FAFLSPQFLQKSLFPLLIAVLFF*SFLGFN
Trigger: GTTAAAGCCAAGAAAACTCAAAAAGAAGAGCACAGC...AATCAGTAAAGGGAACAAGGATTTCTGTAGAAACTGGGGAGAGAGGAAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGGCCGAGAGGCAAGACTaGAGGTTTTCTTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: FFYYKSDVWGISRMLTILAERQD*RFSSAS
Trigger: AGAAGCAGAAGAAAACCTCAAGTCTTGCCTCTCGGC...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCGTCTTGCCTGGGATTTaGATCGCTGAAAGATGTTTG +
Preference number: 5 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCVLPGI*IAERCL
Trigger: CAAACATCTTTCAGCGATCAAAATCCCAGGCAAGAC...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TCCTTGGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCTTGTTTCTTTCTCTTTCTTCTTaGGGACAGAATCTGGTAGTA +
Preference number: 5 (lower is better)
Translates to: SLVKVICKSKSVSEEILFLSLSS*GQNLVV
Trigger: TACTACCAGATTCTGTCCCAAAGAAGAAAGAGAAAG...AAACAAGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS CCA 90 bp CCACTTGACAATACAACTTTAAGTATGTTTTACACAGCTGTTCCTTaGTCAAGGTCATTTGCAAGAGCAAGTCGGTTTCTGAAGAAATCT +
Preference number: 5 (lower is better)
Translates to: PLDNTTLSMFYTAVP*SRSFARASRFLKKS
Trigger: AGATTTCTTCAGAAACCGACTTGCTCTTGCAAATGACCTTGACCAAGGAACAGCTGTGTAAAACATACTTAAAGTTGTATTGTCAAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000486958.5
CDS-3UTR CAA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGGTCTTGCCTGGGATTTaGATCGCTGAAAGATGTTTG +
Preference number: 5 (lower is better)
Translates to: FFYYKSDVWGISRMLTILVLPGI*IAERCL
Trigger: CAAACATCTTTCAGCGATCAAAATCCCAGGCAAGAC...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACATTCTTTTTAAAGAGCTaGCGGAAGGAGCTGCGAAAG +
Preference number: 5 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTFFLKS*RKELRK
Trigger: CTTTCGCAGCTCCTTCCGCAAGCTCTTTAAAAAGAA...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp AAGAAATCTTGTTTGGTGGGTGAAGGATCCATTGAGGGATTCTCATTAGTTTTTCTGAAGAAATCTTGTTaGGTGGGTGAAGGATCCATT +
Preference number: 5 (lower is better)
Translates to: KKSCLVGEGSIEGFSLVFLKKSC*VGEGSI
Trigger: AATGGATCCTTCACCCACCAAACAAGATTTCTTCAG...AAAAACTAATGAGAATCCCTCAATGGATCCTTCACCCACCAAACAAGATTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS-3UTR CAA 90 bp TTTTTCTATTATAAATCTGATGTTTGGGGCATATCAAGGATGCTGACCATCTTGTTACACAGCTGTTCCTaGGTCAAGGTCATTTGCAAG +
Preference number: 5 (lower is better)
Translates to: FFYYKSDVWGISRMLTILLHSCS*VKVICK
Trigger: CTTGCAAATGACCTTGACCAAGGAACAGCTGTGTAA...CAAGATGGTCAGCATCCTTGATATGCCCCAAACATCAGATTTATAATAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACAAGGATGCTGACCATCTaGCACATATCCATGTGGAAA +
Preference number: 5 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTRMLTI*HISMWK
Trigger: TTTCCACATGGATATGTGCAAGATGGTCAGCATCCT...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACAAAGAGGCTTCTCTCTTaGGAATTCCTCTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTKRLLS*EFLFPS
Trigger: AGATGGAAAGAGGAATTCCAAAGAGAGAAGCCTCTT...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACAGATCACGAGTGGGTCTaGAATACTGAGTACTCAATA +
Preference number: 5 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTDHEWV*NTEYSI
Trigger: TATTGAGTACTCAGTATTCAAGACCCACTCGTGATC...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp TTTGTCATCAGACAAGGAGAAGAAAACTTGCAACACTTACATGTGAACCTTTGCTCTGAAGACACCAGTTaGAGTACCAAGATTTTGAAT +
Preference number: 5 (lower is better)
Translates to: FVIRQGEENLQHLHVNLCSEDTS*STKILN
Trigger: ATTCAAAATCTTGGTACTCAAACTGGTGTCTTCAGA...GCAAAGGTTCACATGTAAGTGTTGCAAGTTTTCTTCTCCTTGTCTGATGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp CAGTATTATACTCGGGGAATGACTTCAAGTTGGAAGTTTTCATTCTTACAAACACTTTCTCTTTCTTCTTaGGGACAGAATCTGGTAGTA +
Preference number: 5 (lower is better)
Translates to: QYYTRGMTSSWKFSFLQTLSLSS*GQNLVV
Trigger: TACTACCAGATTCTGTCCCAAAGAAGAAAGAGAAAG...TGTTTGTAAGAATGAAAACTTCCAACTTGAAGTCATTCCCCGAGTATAATACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS-3UTR CAA 90 bp AAGAAATCTTGTTTGGTGGGTGAAGGATCCATTGAGGGATTCTCATTAGTTTTTAGAAATCTTCACCAGTaGCGTTCCCATTTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: KKSCLVGEGSIEGFSLVFRNLHQ*RSHFSF
Trigger: AAAAGAAAAATGGGAACGCAACTGGTGAAGATTTCT...AAAAACTAATGAGAATCCCTCAATGGATCCTTCACCCACCAAACAAGATTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000411874.6
CDS GCA 72 bp CTGCCCGCCGGCGACGTAGCGCTCTTGGGCAGCGGCTaGAGCGGGTGCTCCGGCCGCTCGGCCTCCATGGCG +
Preference number: 6 (lower is better)
Translates to: LPAGDVALLGSG*SGCSGRSASMA
Trigger: CGCCATGGAGGCCGAGCGGCCGGAGCACCCGCTGCAGCCGCTGCCCAAGAGCGCTACGTCGCCGGCGGGCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 72 bp GGAGCTCGGCCGGGGCGCGCAGGGAGCGCTCCACGTTaGCCAGCGGCTCCGCCGGAGAGGACTCGAAGTCCA +
Preference number: 6 (lower is better)
Translates to: GARPGRAGSAPR*PAAPPERTRSP
Trigger: TGGACTTCGAGTCCTCTCCGGCGGAGCCGCTGGGCAACGTGGAGCGCTCCCTGCGCGCCCCGGCCGAGCTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 90 bp AGGCGTGGGGCCACGCCGTCGGCTGGCGGCGCACGCGGGAACTCTTaGAGAGAGCGGCTCAGCGGCTTGGCCTTGCCGTGCGCCTGCGCC +
Preference number: 6 (lower is better)
Translates to: RRGATPSAGGARGNS*RERLSGLALPCACA
Trigger: GGCGCAGGCGCACGGCAAGGCCAAGCCGCTGAGCCGCTCTCTCAAAGAGTTCCCGCGTGCGCCGCCAGCCGACGGCGTGGCCCCACGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS TCA 72 bp CCACGCCGTCGGCTGGCGGCGCACGCGGGAACTCTTTaGGAGAGCGGCTCAGCGGCTTGGCCTTGCCGTGCG +
Preference number: 6 (lower is better)
Translates to: PRRRLAAHAGTL*ESGSAAWPCRA
Trigger: CGCACGGCAAGGCCAAGCCGCTGAGCCGCTCTCTCAAAGAGTTCCCGCGTGCGCCGCCAGCCGACGGCGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 72 bp GCCAGCGCCTTCACGTCCTGCTCGGCCGCGCAGAACTaGGTCGGTGCCAGAAGGCTCTCGGGCCGCTCGTGC +
Preference number: 6 (lower is better)
Translates to: ASAFTSCSAAQN*VGARRLSGRSC
Trigger: GCACGAGCGGCCCGAGAGCCTTCTGGCACCGACGCAGTTCTGCGCGGCCGAGCAGGACGTGAAGGCGCTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
CDS GCA 72 bp ATGGCCTGCAGGGGCCCGGCCAGCGCCTTCACGTCCTaGTCGGCCGCGCAGAACTGCGTCGGTGCCAGAAGG +
Preference number: 6 (lower is better)
Translates to: MACRGPASAFTS*SAAQNCVGARR
Trigger: CCTTCTGGCACCGACGCAGTTCTGCGCGGCCGAGCAGGACGTGAAGGCGCTGGCCGGGCCCCTGCAGGCCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
CDS CCA 72 bp GCGCGTGCTGTAGAGGCGTGGGGCCACGCCGTCGGCTaGCGGCGCACGCGGGAACTCTTTGAGAGAGCGGCT +
Preference number: 6 (lower is better)
Translates to: ARAVEAWGHAVG*RRTRELFERAA
Trigger: AGCCGCTCTCTCAAAGAGTTCCCGCGTGCGCCGCCAGCCGACGGCGTGGCCCCACGCCTCTACAGCACGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 72 bp GCCACGCCGTCGGCTGGCGGCGCACGCGGGAACTCTTaGAGAGAGCGGCTCAGCGGCTTGGCCTTGCCGTGC +
Preference number: 6 (lower is better)
Translates to: ATPSAGGARGNS*RERLSGLALPC
Trigger: GCACGGCAAGGCCAAGCCGCTGAGCCGCTCTCTCAAAGAGTTCCCGCGTGCGCCGCCAGCCGACGGCGTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS TCA 72 bp GCGGGTGCTCCGGCCGCTCGGCCTCCATGGCGAAGCTaGCGGGCCGCAGGAAGCAGATGTCCAGGCTGGACT +
Preference number: 6 (lower is better)
Translates to: AGAPAARPPWRS*RAAGSRCPGWT
Trigger: AGTCCAGCCTGGACATCTGCTTCCTGCGGCCCGTCAGCTTCGCCATGGAGGCCGAGCGGCCGGAGCACCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 72 bp AACTGCGTCGGTGCCAGAAGGCTCTCGGGCCGCTCGTaGTTCCTGCCCTCCAGCTCCCAGTCACTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: NCVGARRLSGRS*FLPSSSQSLGF
Trigger: GAAGCCCAGTGACTGGGAGCTGGAGGGCAGGAAGCACGAGCGGCCCGAGAGCCTTCTGGCACCGACGCAGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
CDS GCA 72 bp CGGACAGCCTCAGGACCTGCAGTGGGGGAAGCATCTTaGCCAGCATTGGCACACTGGGAAGCCAGCCCTTTG +
Preference number: 6 (lower is better)
Translates to: RTASGPAVGEAS*PALAHWEASPL
Trigger: CAAAGGGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCACTGCAGGTCCTGAGGCTGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
ENST00000486958.5
CDS CCA 72 bp GGATCCCAGTGTCACGGACAGCCTCAGGACCTGCAGTaGGGGAAGCATCTTGCCCAGCATTGGCACACTGGG +
Preference number: 6 (lower is better)
Translates to: GSQCHGQPQDLQ*GKHLAQHWHTG
Trigger: CCCAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCACTGCAGGTCCTGAGGCTGTCCGTGACACTGGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
ENST00000486958.5
CDS TCA 72 bp TGGCGTGGCCACTTCAGGACCCTTTCCTGCAGTGCGTaGAGCAGATCCAGGTGCTGCTGGACGAGGTACCGT +
Preference number: 6 (lower is better)
Translates to: WRGHFRTLSCSA*SRSRCCWTRYR
Trigger: ACGGTACCTCGTCCAGCAGCACCTGGATCTGCTTCACGCACTGCAGGAAAGGGTCCTGAAGTGGCCACGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 72 bp ACGGACAGCCTCAGGACCTGCAGTGGGGGAAGCATCTaGCCCAGCATTGGCACACTGGGAAGCCAGCCCTTT +
Preference number: 6 (lower is better)
Translates to: TDSLRTCSGGSI*PSIGTLGSQPF
Trigger: AAAGGGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCACTGCAGGTCCTGAGGCTGTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
ENST00000486958.5
CDS CAA 90 bp CCCAGTGTCACGGACAGCCTCAGGACCTGCAGTGGGGGAAGCATCTaGCCCAGCATTGGCACACTGGGAAGCCAGCCCTTTGTACAGCTT +
Preference number: 6 (lower is better)
Translates to: PSVTDSLRTCSGGSI*PSIGTLGSQPFVQL
Trigger: AAGCTGTACAAAGGGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCACTGCAGGTCCTGAGGCTGTCCGTGACACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000486958.5
CDS CAA 90 bp ACTGGGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTTGCTGCTGTaGGCTTTTCTTCACTGGGGGCATCAGATGTGTGATGGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: TGLPGLHALHQALLL*AFLHWGHQMCDGRA
Trigger: GGCCCTGCCATCACACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 90 bp ACTGGGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTTGCTGCTGTaGGCTTTTCTTCACTGGGGGCATCAGATGTCACCTGCGGTGCTC +
Preference number: 6 (lower is better)
Translates to: TGLPGLHALHQALLL*AFLHWGHQMSPAVL
Trigger: GAGCACCGCAGGTGACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483305.1
CDS CAA 90 bp CTCCCAGTCACTGGGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTaGCTGCTGTTGGCTTTTCTTCACTGGGGGCATCAGATGTCACCT +
Preference number: 6 (lower is better)
Translates to: LPVTGLPGLHALHQA*LLLAFLHWGHQMSP
Trigger: AGGTGACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAGTGACTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483305.1
CDS TCA 72 bp ACTGGGAGCAGAAGGGTAGGGTTGCAGCAACTCTTCTaGGTGGATCCCAGTGTCACGGACAGCCTCAGGACC +
Preference number: 6 (lower is better)
Translates to: TGSRRVGLQQLF*VDPSVTDSLRT
Trigger: GGTCCTGAGGCTGTCCGTGACACTGGGATCCACTCAGAAGAGTTGCTGCAACCCTACCCTTCTGCTCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
ENST00000486958.5
CDS GCA 72 bp CTGGGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTTaGTGCTGTTGGCTTTTCTTCACTGGGGGCATCAGA +
Preference number: 6 (lower is better)
Translates to: LGFPGCMLSIRL*CCWLFFTGGIR
Trigger: TCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
CDS CCA 72 bp GCAGTGGGGGAAGCATCTTGCCCAGCATTGGCACACTaGGAAGCCAGCCCTTTGTACAGCTTCGCCATGGAT +
Preference number: 6 (lower is better)
Translates to: AVGEASCPALAH*EASPLYSFAMD
Trigger: ATCCATGGCGAAGCTGTACAAAGGGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGATGCTTCCCCCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000486958.5
CDS CAA 72 bp ACTGGGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTaGCTGCTGTTGGCTTTTCTTCACTGGGGGCATCAG +
Preference number: 6 (lower is better)
Translates to: TGLPGLHALHQA*LLLAFLHWGHQ
Trigger: CTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
CDS CAA 90 bp CTCCCAGTCACTGGGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTaGCTGCTGTTGGCTTTTCTTCACTGGGGGCATCAGATGTGTGAT +
Preference number: 6 (lower is better)
Translates to: LPVTGLPGLHALHQA*LLLAFLHWGHQMCD
Trigger: ATCACACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCCCAGTGACTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 72 bp GGCTTCCCGGGCTGCATGCTCTCCATCAGGCTTTGCTaGTGTTGGCTTTTCTTCACTGGGGGCATCAGATGT +
Preference number: 6 (lower is better)
Translates to: GFPGCMLSIRLC*CWLFFTGGIRC
Trigger: ACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000483305.1
CDS CCA 72 bp CCGGGCTGCATGCTCTCCATCAGGCTTTGCTGCTGTTaGCTTTTCTTCACTGGGGGCATCAGATGTCACCTG +
Preference number: 6 (lower is better)
Translates to: PGCMLSIRLCCC*LFFTGGIRCHL
Trigger: CAGGTGACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483305.1
CDS CAA 72 bp TTAGGCTGCCTCCACATGCCAGATGGGAGATGGCCCTaGGACTGGATATCAGCCGAGAGGCAAGACTTGAGG +
Preference number: 6 (lower is better)
Translates to: LGCLHMPDGRWP*DWISAERQDLR
Trigger: CCTCAAGTCTTGCCTCTCGGCTGATATCCAGTCCAAGGGCCATCTCCCATCTGGCATGTGGAGGCAGCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 72 bp CCCGGGCTGCATGCTCTCCATCAGGCTTTGCTGCTGTaGGCTTTTCTTCACTGGGGGCATCAGATGTCACCT +
Preference number: 6 (lower is better)
Translates to: PGLHALHQALLL*AFLHWGHQMSP
Trigger: AGGTGACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483305.1
CDS CCA 72 bp CCGGGCTGCATGCTCTCCATCAGGCTTTGCTGCTGTTaGCTTTTCTTCACTGGGGGCATCAGATGTGTGATG +
Preference number: 6 (lower is better)
Translates to: PGCMLSIRLCCC*LFFTGGIRCVM
Trigger: CATCACACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 72 bp CCCGGGCTGCATGCTCTCCATCAGGCTTTGCTGCTGTaGGCTTTTCTTCACTGGGGGCATCAGATGTGTGAT +
Preference number: 6 (lower is better)
Translates to: PGLHALHQALLL*AFLHWGHQMCD
Trigger: ATCACACATCTGATGCCCCCAGTGAAGAAAAGCCAACAGCAGCAAAGCCTGATGGAGAGCATGCAGCCCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CCA 72 bp TGCCTCCACATGCCAGATGGGAGATGGCCCTTGGACTaGATATCAGCCGAGAGGCAAGACTTGAGGTTTTCT +
Preference number: 6 (lower is better)
Translates to: CLHMPDGRWPLD*ISAERQDLRFS
Trigger: AGAAAACCTCAAGTCTTGCCTCTCGGCTGATATCCAGTCCAAGGGCCATCTCCCATCTGGCATGTGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CCA 72 bp TTCTTTACCATCCTTAGGCTGCCTCCACATGCCAGATaGGAGATGGCCCTTGGACTGGATATCAGCCGAGAG +
Preference number: 6 (lower is better)
Translates to: FFTILRLPPHAR*EMALGLDISRE
Trigger: CTCTCGGCTGATATCCAGTCCAAGGGCCATCTCCCATCTGGCATGTGGAGGCAGCCTAAGGATGGTAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 72 bp TCTTGCCCAGCATTGGCACACTGGGAAGCCAGCCCTTaGTACAGCTTCGCCATGGATGACCTAACAGAATGG +
Preference number: 6 (lower is better)
Translates to: SCPALAHWEASP*YSFAMDDLTEW
Trigger: CCATTCTGTTAGGTCATCCATGGCGAAGCTGTACAAAGGGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486958.5
CDS CAA 90 bp GGGGAAGCATCTTGCCCAGCATTGGCACACTGGGAAGCCAGCCCTTaGTACAGCTTCGCCATGGATGACTTCTTGAGCTTTTTCCGTTTC +
Preference number: 6 (lower is better)
Translates to: GEASCPALAHWEASP*YSFAMDDFLSFFRF
Trigger: GAAACGGAAAAAGCTCAAGAAGTCATCCATGGCGAAGCTGTACAAAGGGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGATGCTTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS GCA 72 bp ACGTATTCTTCACCCCATTCTTTACCATCCTTAGGCTaGCTCCACATGCCAGATGGGAGATGGCCCTTGGAC +
Preference number: 6 (lower is better)
Translates to: TYSSPHSLPSLG*LHMPDGRWPLD
Trigger: GTCCAAGGGCCATCTCCCATCTGGCATGTGGAGGCAGCCTAAGGATGGTAAAGAATGGGGTGAAGAATACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 72 bp TCTTGCCCAGCATTGGCACACTGGGAAGCCAGCCCTTaGTACAGCTTCGCCATGGATGACTTCTTGAGCTTT +
Preference number: 6 (lower is better)
Translates to: SCPALAHWEASP*YSFAMDDFLSF
Trigger: AAAGCTCAAGAAGTCATCCATGGCGAAGCTGTACAAAGGGCTGGCTTCCCAGTGTGCCAATGCTGGGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 90 bp GATGGGAGATGGCCCTTGGACTGGATATCAGCCGAGAGGCAAGACTaGAGGTTTTCTTCTGCTTCTGGAGTTGTTGGGTTCACTCCAGGA +
Preference number: 6 (lower is better)
Translates to: DGRWPLDWISAERQD*RFSSASGVVGFTPG
Trigger: TCCTGGAGTGAACCCAACAACTCCAGAAGCAGAAGAAAACCTCAAGTCTTGCCTCTCGGCTGATATCCAGTCCAAGGGCCATCTCCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 90 bp TTACCATCCTTAGGCTGCCTCCACATGCCAGATGGGAGATGGCCCTaGGACTGGATATCAGCCGAGAGGCAAGACTTGAGGTTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: LPSLGCLHMPDGRWP*DWISAERQDLRFSS
Trigger: AGAAGAAAACCTCAAGTCTTGCCTCTCGGCTGATATCCAGTCCAAGGGCCATCTCCCATCTGGCATGTGGAGGCAGCCTAAGGATGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CCA 72 bp GGGATATTGATAGAACGAAAAGGACTTCCTTGTGCTTaGGCAGGCCCGGCCTGTGAGCTGTGCTCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: GILIERKGLPCA*AGPACELCSSF
Trigger: AAAAGAAGAGCACAGCTCACAGGCCGGGCCTGCCCAAGCACAAGGAAGTCCTTTTCGTTCTATCAATATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1
CDS CCA 72 bp AGCCGAGAGGCAAGACTTGAGGTTTTCTTCTGCTTCTaGAGTTGTTGGGTTCACTCCAGGACCCATCATTCC +
Preference number: 6 (lower is better)
Translates to: SREARLEVFFCF*SCWVHSRTHHS
Trigger: GGAATGATGGGTCCTGGAGTGAACCCAACAACTCCAGAAGCAGAAGAAAACCTCAAGTCTTGCCTCTCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 72 bp TGGCCCTTGGACTGGATATCAGCCGAGAGGCAAGACTaGAGGTTTTCTTCTGCTTCTGGAGTTGTTGGGTTC +
Preference number: 6 (lower is better)
Translates to: WPLDWISAERQD*RFSSASGVVGF
Trigger: GAACCCAACAACTCCAGAAGCAGAAGAAAACCTCAAGTCTTGCCTCTCGGCTGATATCCAGTCCAAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 90 bp AAAAGGTTGGTAAAGTCTTCGCTTGGAAGAACAGGCTCAGGGATATaGATAGAACGAAAAGGACTTCCTTGTGCTTGGGCAGGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: KRLVKSSLGRTGSGI*IERKGLPCAWAGPA
Trigger: GGCCGGGCCTGCCCAAGCACAAGGAAGTCCTTTTCGTTCTATCAATATCCCTGAGCCTGTTCTTCCAAGCGAAGACTTTACCAACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1
CDS CAA 90 bp TCACCTGCGGTGCTCCAAGGCACACCTTCAACTCTCTTCTCTCCCTaGCTTGCCCTAGCAGAGTCATACGGAATAATGGAAAACTCAACT +
Preference number: 6 (lower is better)
Translates to: SPAVLQGTPSTLFSP*LALAESYGIMENST
Trigger: AGTTGAGTTTTCCATTATTCCGTATGACTCTGCTAGGGCAAGCAAGGGAGAGAAGAGAGTTGAAGGTGTGCCTTGGAGCACCGCAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483305.1
CDS GCA 72 bp GATATCAGCCGAGAGGCAAGACTTGAGGTTTTCTTCTaGTTCTGGAGTTGTTGGGTTCACTCCAGGACCCAT +
Preference number: 6 (lower is better)
Translates to: DISREARLEVFF*FWSCWVHSRTH
Trigger: ATGGGTCCTGGAGTGAACCCAACAACTCCAGAAGCAGAAGAAAACCTCAAGTCTTGCCTCTCGGCTGATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 72 bp GTGCTCCAAGGCACACCTTCAACTCTCTTCTCTCCCTaGCTTGCCCTAGCAGAGTCATACGGAATAATGGAA +
Preference number: 6 (lower is better)
Translates to: VLQGTPSTLFSP*LALAESYGIME
Trigger: TTCCATTATTCCGTATGACTCTGCTAGGGCAAGCAAGGGAGAGAAGAGAGTTGAAGGTGTGCCTTGGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483305.1
CDS TCA 72 bp CTGGGAAGCCAGCCCTTTGTACAGCTTCGCCATGGATaGCCTAACAGAATGGAAATAACAGTTCTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: LGSQPFVQLRHG*PNRMEITVLRL
Trigger: CAACCTGAGAACTGTTATTTCCATTCTGTTAGGTCATCCATGGCGAAGCTGTACAAAGGGCTGGCTTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486958.5
CDS GCA 72 bp CCAAGGCACACCTTCAACTCTCTTCTCTCCCTTGCTTaGCCTAGCAGAGTCATACGGAATAATGGAAAACTC +
Preference number: 6 (lower is better)
Translates to: PRHTFNSLLSLA*PSRVIRNNGKL
Trigger: GAGTTTTCCATTATTCCGTATGACTCTGCTAGGGCAAGCAAGGGAGAGAAGAGAGTTGAAGGTGTGCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483305.1
CDS CCA 72 bp TGTCTACCCTGGCCAGCCTCCTTGAGTTTATCTGGGTaGTCTTTTGTGACGTATTCTTCACCCCATTCTTTA +
Preference number: 6 (lower is better)
Translates to: CLPWPASLSLSG*SFVTYSSPHSL
Trigger: TAAAGAATGGGGTGAAGAATACGTCACAAAAGACCACCCAGATAAACTCAAGGAGGCTGGCCAGGGTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 90 bp TCGCTTCTCCTGTTGAAGCTGCTCGATTTTCTGTTGCATTTCTTCTaGTTTGGAAGTGATGGCTTGGATCATCGACATGGCATTGCTCAG +
Preference number: 6 (lower is better)
Translates to: SLLLLKLLDFLLHFF*FGSDGLDHRHGIAQ
Trigger: CTGAGCAATGCCATGTCGATGATCCAAGCCATCACTTCCAAACAAGAAGAAATGCAACAGAAAATCGAGCAGCTTCAACAGGAGAAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1
CDS TCA 72 bp TTAATCTCTTCATCACCCTCTTTCAGGACTACAACATaGACCAATGAGATGCACTCAGGCAGGTCCCTTAGG +
Preference number: 6 (lower is better)
Translates to: LISSSPSFRTTT*TNEMHSGRSLR
Trigger: CCTAAGGGACCTGCCTGAGTGCATCTCATTGGTTCATGTTGTAGTCCTGAAAGAGGGTGATGAAGAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS TCA 72 bp TTCTCATGTCAGAAGTCCCTGAAAATAGGAAAGCTTTaGTGTCACCACCAGCCCCAAGGACCACAGAAATCT +
Preference number: 6 (lower is better)
Translates to: FSCQKSLKIGKL*CHHQPQGPQKS
Trigger: AGATTTCTGTGGTCCTTGGGGCTGGTGGTGACATCAAAGCTTTCCTATTTTCAGGGACTTCTGACATGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS CCA 72 bp GGCCTGAGAAGGCAAAAGGTTGGTAAAGTCTTCGCTTaGAAGAACAGGCTCAGGGATATTGATAGAACGAAA +
Preference number: 6 (lower is better)
Translates to: GLRRQKVGKVFA*KNRLRDIDRTK
Trigger: TTTCGTTCTATCAATATCCCTGAGCCTGTTCTTCCAAGCGAAGACTTTACCAACCTTTTGCCTTCTCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1
CDS CCA 72 bp TTCCTTTTACATTACTGTCTCCTACATGAACAGATCTaGACTCTTGGGCTTTCTCGTAGGCCTGAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: FLLHYCLLHEQI*TLGLSRRPEKA
Trigger: TGCCTTCTCAGGCCTACGAGAAAGCCCAAGAGTCCAGATCTGTTCATGTAGGAGACAGTAATGTAAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CAA 72 bp GTAAAGTCTTCGCTTGGAAGAACAGGCTCAGGGATATaGATAGAACGAAAAGGACTTCCTTGTGCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: VKSSLGRTGSGI*IERKGLPCAWA
Trigger: TGCCCAAGCACAAGGAAGTCCTTTTCGTTCTATCAATATCCCTGAGCCTGTTCTTCCAAGCGAAGACTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1
CDS CAA 72 bp TTTCTCATGTCAGAAGTCCCTGAAAATAGGAAAGCTTaGATGTCACCACCAGCCCCAAGGACCACAGAAATC +
Preference number: 6 (lower is better)
Translates to: FLMSEVPENRKA*MSPPAPRTTEI
Trigger: GATTTCTGTGGTCCTTGGGGCTGGTGGTGACATCAAAGCTTTCCTATTTTCAGGGACTTCTGACATGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433605.2
CDS TCA 72 bp GAAGAGGCTTCTCTCTTTGGAATTCCTCTTTCCATCTaGCCCCTGGAATGTGGCTTTTATCTTCAAGATCAG +
Preference number: 6 (lower is better)
Translates to: EEASLFGIPLSI*PLECGFYLQDQ
Trigger: CTGATCTTGAAGATAAAAGCCACATTCCAGGGGTCAGATGGAAAGAGGAATTCCAAAGAGAGAAGCCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398800.8
ENST00000409978.7
CDS CCA 72 bp TTCTGTTGCATTTCTTCTTGTTTGGAAGTGATGGCTTaGATCATCGACATGGCATTGCTCAGCTCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: FCCISSCLEVMA*IIDMALLSSSL
Trigger: CAAGGAAGAGCTGAGCAATGCCATGTCGATGATCCAAGCCATCACTTCCAAACAAGAAGAAATGCAACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1
CDS CAA 72 bp CTGTTGAAGCTGCTCGATTTTCTGTTGCATTTCTTCTaGTTTGGAAGTGATGGCTTGGATCATCGACATGGC +
Preference number: 6 (lower is better)
Translates to: LLKLLDFLLHFF*FGSDGLDHRHG
Trigger: GCCATGTCGATGATCCAAGCCATCACTTCCAAACAAGAAGAAATGCAACAGAAAATCGAGCAGCTTCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1
CDS CAA 90 bp TCGAGATTCTCTTCGCTTCTCCTGTTGAAGCTGCTCGATTTTCTGTaGCATTTCTTCTTGTTTGGAAGTGATGGCTTGGATCATCGACAT +
Preference number: 6 (lower is better)
Translates to: SRFSSLLLLKLLDFL*HFFLFGSDGLDHRH
Trigger: ATGTCGATGATCCAAGCCATCACTTCCAAACAAGAAGAAATGCAACAGAAAATCGAGCAGCTTCAACAGGAGAAGCGAAGAGAATCTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1
CDS CAA 72 bp TCTTCGCTTCTCCTGTTGAAGCTGCTCGATTTTCTGTaGCATTTCTTCTTGTTTGGAAGTGATGGCTTGGAT +
Preference number: 6 (lower is better)
Translates to: SSLLLLKLLDFL*HFFLFGSDGLD
Trigger: ATCCAAGCCATCACTTCCAAACAAGAAGAAATGCAACAGAAAATCGAGCAGCTTCAACAGGAGAAGCGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1
CDS CAA 90 bp CTGCTCGATTTTCTGTTGCATTTCTTCTTGTTTGGAAGTGATGGCTaGGATCATCGACATGGCATTGCTCAGCTCTTCCTTGAAATAGTT +
Preference number: 6 (lower is better)
Translates to: LLDFLLHFFLFGSDG*DHRHGIAQLFLEIV
Trigger: AACTATTTCAAGGAAGAGCTGAGCAATGCCATGTCGATGATCCAAGCCATCACTTCCAAACAAGAAGAAATGCAACAGAAAATCGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1
CDS CAA 72 bp GGCTTTAACTTTTCGAGATTCTCTTCGCTTCTCCTGTaGAAGCTGCTCGATTTTCTGTTGCATTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: GFNFSRFSSLLL*KLLDFLLHFFL
Trigger: CAAGAAGAAATGCAACAGAAAATCGAGCAGCTTCAACAGGAGAAGCGAAGAGAATCTCGAAAAGTTAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1
CDS TCA 72 bp GCTTTAACTTTTCGAGATTCTCTTCGCTTCTCCTGTTaGAGCTGCTCGATTTTCTGTTGCATTTCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: ALTFRDSLRFSC*SCSIFCCISSC
Trigger: ACAAGAAGAAATGCAACAGAAAATCGAGCAGCTTCAACAGGAGAAGCGAAGAGAATCTCGAAAAGTTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398800.8
ENST00000409978.7
ENST00000488692.1