RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000163947

Ensembl transcript IDs: ENST00000296315.8, ENST00000338458.8, ENST00000413728.6, ENST00000465659.5, ENST00000468466.1, ENST00000468727.5, ENST00000473779.5, ENST00000477440.6, ENST00000477833.5, ENST00000481422.5, ENST00000486829.1, ENST00000495373.5, ENST00000496106.5, ENST00000497267.5, ENST00000498517.5

Found 876 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCGCTCACAGTCGAGGCTGACCTCACTCGTGTCCATACTACAGTCTaGCTCACTGTCCGATTGGTCCATCTGCTCAAGTTTTGTTTCTCC +
Preference number: 1 (lower is better)
Translates to: ALTVEADLTRVHTTV*LTVRLVHLLKFCFS
Trigger: GGAGAAACAAAACTTGAGCAGATGGACCAATCGGACAGTGAGTCAGACTGTAGTATGGACACGAGTGAGGTCAGCCTCGACTGTGAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR TCA 90 bp TTCCACAGGAAGAGTCTGTCTGTTCCATGCGCTCACAGTCGAGGCTaGCCTCACTCGTGTCCATACTACAGTCTGACTCACTGTCCGATT +
Preference number: 1 (lower is better)
Translates to: FHRKSLSVPCAHSRG*PHSCPYYSLTHCPI
Trigger: AATCGGACAGTGAGTCAGACTGTAGTATGGACACGAGTGAGGTCAGCCTCGACTGTGAGCGCATGGAACAGACAGACTCTTCCTGTGGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR GCA 90 bp TCCCGAAGTGCACATGCTTCTGTCAGACGTTACTTTCACCGTGCCTaGTGTTTCCACAGGAAGAGTCTGTCTGTTCCATGCGCTCACAGT +
Preference number: 1 (lower is better)
Translates to: SRSAHASVRRYFHRA*CFHRKSLSVPCAHS
Trigger: ACTGTGAGCGCATGGAACAGACAGACTCTTCCTGTGGAAACAGCAGGCACGGTGAAAGTAACGTCTGACAGAAGCATGTGCACTTCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR GCA 90 bp TGCTTCCCGAAGTGCACATGCTTCTGTCAGACGTTACTTTCACCGTaGCTGCTGTTTCCACAGGAAGAGTCTGTCTGTTCCATGCGCTCA +
Preference number: 1 (lower is better)
Translates to: CFPKCTCFCQTLLSP*LLFPQEESVCSMRS
Trigger: TGAGCGCATGGAACAGACAGACTCTTCCTGTGGAAACAGCAGGCACGGTGAAAGTAACGTCTGACAGAAGCATGTGCACTTCGGGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR GCA 90 bp AAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATaGTTCTGTCAGACGTTACTTTCACCGTGCCTGCTGTTTCCACAG +
Preference number: 1 (lower is better)
Translates to: KYCTGKMQACFPKCT*FCQTLLSPCLLFPQ
Trigger: CTGTGGAAACAGCAGGCACGGTGAAAGTAACGTCTGACAGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR CCA 90 bp AGCTGCTCATTGTGGGTGACGGCTCGAGTGATCACAAGCACTTCTTaGAACAGGAAAACATGCAGTTTCACGCCCCGATTGTTCTTCAGT +
Preference number: 1 (lower is better)
Translates to: SCSLWVTARVITSTS*NRKTCSFTPRLFFS
Trigger: ACTGAAGAACAATCGGGGCGTGAAACTGCATGTTTTCCTGTTCCAAGAAGTGCTTGTGATCACTCGAGCCGTCACCCACAATGAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR TCA 90 bp AGGAAAACATGCAGTTTCACGCCCCGATTGTTCTTCAGTTCACCATaGCAACACAAGACTCGAGAGCTGTCGATCAGGGAGTCTTTCTGG +
Preference number: 1 (lower is better)
Translates to: RKTCSFTPRLFFSSP*QHKTRELSIRESFW
Trigger: CCAGAAAGACTCCCTGATCGACAGCTCTCGAGTCTTGTGTTGTCATGGTGAACTGAAGAACAATCGGGGCGTGAAACTGCATGTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR GCA 90 bp GAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTaGACATGCTTCTGTCAGACGTTACTTTCACCGTGCCTGCTGTTT +
Preference number: 1 (lower is better)
Translates to: ECKYCTGKMQACFPK*TCFCQTLLSPCLLF
Trigger: AAACAGCAGGCACGGTGAAAGTAACGTCTGACAGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR GCA 90 bp TCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATaGAGGCCTGCTTCCCGAAGTGCACATGCTTCTGTCAGACGTTAC +
Preference number: 1 (lower is better)
Translates to: SKPFHLWNANTVQVR*RPASRSAHASVRRY
Trigger: GTAACGTCTGACAGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR CCA 90 bp GCTCTGGCCTTTCTCAGAAGGCACTGGACCATGCTTTTCTCTCAATaGCTCCCACAGAAGGTTCTGACGAAGTGCTTTTCATTCCAAATT +
Preference number: 1 (lower is better)
Translates to: ALAFLRRHWTMLFSQ*LPQKVLTKCFSFQI
Trigger: AATTTGGAATGAAAAGCACTTCGTCAGAACCTTCTGTGGGAGCCATTGAGAGAAAAGCATGGTCCAGTGCCTTCTGAGAAAGGCCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR CCA 90 bp CAAGGCCGTCTAAATTCCGTGCCTTTAGCTACCACATCTAAGAGCTaGGAAAGTGGTACAGAAGCACAAGAGGAAGGACTCTTCAAACAA +
Preference number: 1 (lower is better)
Translates to: QGRLNSVPLATTSKS*ESGTEAQEEGLFKQ
Trigger: TTGTTTGAAGAGTCCTTCCTCTTGTGCTTCTGTACCACTTTCCCAGCTCTTAGATGTGGTAGCTAAAGGCACGGAATTTAGACGGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR CCA 90 bp GGAAGTGATGAAATAGCATACAAATGCAGTTTGACTTCAAGACCGTaGCTTTTCTCTTTCCACCAGCTGCCCACTCCCTCCAAACTACCA +
Preference number: 1 (lower is better)
Translates to: GSDEIAYKCSLTSRP*LFSFHQLPTPSKLP
Trigger: TGGTAGTTTGGAGGGAGTGGGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTATGCTATTTCATCACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
3UTR GCA 90 bp CTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTaGCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTAC +
Preference number: 1 (lower is better)
Translates to: LHPSRHLGNTTQGNS*HRFQLTQTDWQLQY
Trigger: GTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR TCA 90 bp CATAATTACAATTCTGATTATAGCACAGAACCAGAGATGGCAAATTaGCGACCCAAAAGCAGAGCAGGAAAGCCCAAAGCTCTGGCCTTT +
Preference number: 1 (lower is better)
Translates to: HNYNSDYSTEPEMAN*RPKSRAGKPKALAF
Trigger: AAAGGCCAGAGCTTTGGGCTTTCCTGCTCTGCTTTTGGGTCGTCAATTTGCCATCTCTGGTTCTGTGCTATAATCAGAATTGTAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR CCA 90 bp CTGGAGAACATAATTACAATTCTGATTATAGCACAGAACCAGAGATaGCAAATTGACGACCCAAAAGCAGAGCAGGAAAGCCCAAAGCTC +
Preference number: 1 (lower is better)
Translates to: LENIITILIIAQNQR*QIDDPKAEQESPKL
Trigger: GAGCTTTGGGCTTTCCTGCTCTGCTTTTGGGTCGTCAATTTGCCATCTCTGGTTCTGTGCTATAATCAGAATTGTAATTATGTTCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR CCA 90 bp ACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTaGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTA +
Preference number: 1 (lower is better)
Translates to: TESNLFEYLSIHPDT*EIQHRVIVATDSSL
Trigger: TAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
3UTR GCA 90 bp GAGAGACTGGGCCAACATGTATACTTTCACAAAAGTATGAAAAAGTaGTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAG +
Preference number: 1 (lower is better)
Translates to: ERLGQHVYFHKSMKK*FSKPFHLWNANTVQ
Trigger: CTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTTCATACTTTTGTGAAAGTATACATGTTGGCCCAGTCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR CCA 90 bp AATTCCCTGAATGATATTTATAGCTTCTTCCAAGTGCTGCTGATCTaGATTATCATTTGGTGTGTGCCTCAAGATTTCTCGGAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: NSLNDIYSFFQVLLI*IIIWCVPQDFSEKQ
Trigger: CTGCTTCTCCGAGAAATCTTGAGGCACACACCAAATGATAATCCAGATCAGCAGCACTTGGAAGAAGCTATAAATATCATTCAGGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR TCA 90 bp TCGGAGTCAAGCACCCCAGCTTGCCCGGCAGCACACAAAACTGTTTCTTTGGCTTTCTCTCATTGTTGCTaGATGCCCCTCGCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: SESSTPACPAAHKTVSLAFSHCC*MPLAGS
Trigger: GCTCCCTGCGAGGGGCATTCAGCAACAATGAGAGAA...AGCCAAAGAAACAGTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGACTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR CCA 90 bp TCGGAGTCAAGCACCCCAGCTTGCCCGGCAGCACACAAAACTGTTTCTTTGGCTGTCTTTCACGGGGATTaGCTGACGGTACAGCTGGTA +
Preference number: 2 (lower is better)
Translates to: SESSTPACPAAHKTVSLAVFHGD*LTVQLV
Trigger: TACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGAC...AGCCAAAGAAACAGTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGACTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR CAA 90 bp ACGGGCGGGATGAGGTTTGCTAGCGACGTGACTCGGGAAAGGGGTTaGACCCGTTTATTACTAGGCTCACTTATGTCGAGACTGCAAAGG +
Preference number: 2 (lower is better)
Translates to: TGGMRFASDVTRERG*TRLLLGSLMSRLQR
Trigger: CCTTTGCAGTCTCGACATAAGTGAGCCTAGTAATAAACGGGTCAAACCCCTTTCCCGAGTCACGTCGCTAGCAAACCTCATCCCGCCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
3UTR-3UTR GCA 90 bp TCTCACTCCACAGCTTGCTATCTCTCCGTTTCGTGCTCGAGGGGGCGGCATTTCATGGGAAAGTTGTTTTaGCGCTGCCGTTTAGGCATG +
Preference number: 2 (lower is better)
Translates to: SHSTACYLSVSCSRGRHFMGKLF*RCRLGM
Trigger: CATGCCTAAACGGCAGCGGCAAAACAACTTTCCCAT...GAAATGCCGCCCCCTCGAGCACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477833.5
3UTR-3UTR CCA 90 bp AGATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCTCTATGAAAGCCCAAAGCTCTaGCCTTTCTCAGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: RFRAGSRFCPGPFKVSLYESPKL*PFSEGT
Trigger: AGTGCCTTCTGAGAAAGGCCAGAGCTTTGGGCTTTC...ATAGAGGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR CCA 90 bp GATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCTCTATTGAAAGCCCAAAGCTCTaGCCTTTCTCAGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: DSELAAASVLALLRSASIESPKL*PFSEGT
Trigger: AGTGCCTTCTGAGAAAGGCCAGAGCTTTGGGCTTTC...AATAGAGGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR CCA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCGGTCCAGCAGAGCTTTaGCGGCTACTTGATTGCTGC +
Preference number: 2 (lower is better)
Translates to: SVECKYCTGKMQACFPKCGPAEL*RLLDCC
Trigger: GCAGCAATCAAGTAGCCGCCAAAGCTCTGCTGGACC...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR TCA 90 bp GGCTTTCCTCTGCTTCTGTCTGCAGCAGGTTCACTTGCTGTATCAATAACGACTGCTAGCAACCAACTATaGGAGACACCTCCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: GFPLLLSAAGSLAVSITTASNQL*ETPPGA
Trigger: GGCACCAGGAGGTGTCTCTCATAGTTGGTTGCTAGC...AGTCGTTATTGATACAGCAAGTGAACCTGCTGCAGACAGAAGCAGAGGAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR-3UTR TCA 90 bp GTTAAAGATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCAAATCCTGGACTCGGTaGTCTTGCTTTTTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: VKDSELAAASVLALLRSAKSWTR*SCFLWS
Trigger: GGACCACAAAAAGCAAGATCACCGAGTCCAGGATTT...GGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATCTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR TCA 90 bp AGATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCTCTATTGTAGCGAGTGGGTCTaGCTTTGGGATCCATTTTTG +
Preference number: 2 (lower is better)
Translates to: RFRAGSRFCPGPFKVSLYCSEWV*LWDPFL
Trigger: CAAAAATGGATCCCAAAGTCAGACCCACTCGCTACA...ATAGAGGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR GCA 90 bp GGCTTTCCTCTGCTTCTGTCTGCAGCAGGTTCACTTGCTGTATCAATAACGACTGGTAAGATGCAGGCCTaGTTCCCGAAGTGCACATGC +
Preference number: 2 (lower is better)
Translates to: GFPLLLSAAGSLAVSITTGKMQA*FPKCTC
Trigger: GCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACC...AGTCGTTATTGATACAGCAAGTGAACCTGCTGCAGACAGAAGCAGAGGAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR-3UTR CCA 90 bp GGAAGAGTCTGTCTGTTCCATGCGCTCACAGTCGAGGCTGACCTCACTCGTGTCCAAGTGCTGCTGATCTaGATTATCATTTGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: GRVCLFHALTVEADLTRVQVLLI*IIIWCV
Trigger: CACACACCAAATGATAATCCAGATCAGCAGCACTTG...GACACGAGTGAGGTCAGCCTCGACTGTGAGCGCATGGAACAGACAGACTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR CAA 90 bp AAGCTGCTCATTGTGGGTGACGGCTCGAGTGATCACAAGCACTTCTaGGAACAGGAAAACATGCAGTTTCACGCCCCGATTGTTCTTCAG +
Preference number: 2 (lower is better)
Translates to: KLLIVGDGSSDHKHF*EQENMQFHAPIVLQ
Trigger: CTGAAGAACAATCGGGGCGTGAAACTGCATGTTTTCCTGTTCCAAGAAGTGCTTGTGATCACTCGAGCCGTCACCCACAATGAGCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR TCA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTGCTAGCAACCAACTATaGGAGACACCTCCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLAASNQL*ETPPGA
Trigger: GGCACCAGGAGGTGTCTCTCATAGTTGGTTGCTAGC...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR TCA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCGTCCATACTACAGTCTaGCTCACTGTCCGATTGGTC +
Preference number: 2 (lower is better)
Translates to: SVECKYCTGKMQACFPKCVHTTV*LTVRLV
Trigger: GACCAATCGGACAGTGAGTCAGACTGTAGTATGGAC...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR GCA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCGGTAAGATGCAGGCCTaGTTCCCGAAGTGCACATGC +
Preference number: 2 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGGKMQA*FPKCTC
Trigger: GCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACC...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR-3UTR GCA 90 bp CATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCGGTAAGATGCAGGCCTaGTTCCCGAAGTGCACATGC +
Preference number: 2 (lower is better)
Translates to: HPSRHLGNTTQGNSCHRFGKMQA*FPKCTC
Trigger: GCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACC...GAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR-3UTR GCA 90 bp CCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACACTGTACAGGTAAGATaGAGGCCTGCTTCCCGAAGT +
Preference number: 2 (lower is better)
Translates to: PLHPSRHLGNTTQGNSCHTVQVR*RPASRS
Trigger: ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGT...GTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR-3UTR GCA 90 bp AGATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCTCTATGCTGTTTTTAAGGTCTaGACTTTACCCTGCACTGTA +
Preference number: 2 (lower is better)
Translates to: RFRAGSRFCPGPFKVSLYAVFKV*TLPCTV
Trigger: TACAGTGCAGGGTAAAGTGCAGACCTTAAAAACAGC...ATAGAGGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR CAA 90 bp ACCAGGCGGCTTCTTGGAATATCGAGGAAATTCCAGAGATCTAGTTaGCGGCTAAAGGGGGATTCTAAACATCGCTGTAGGAAATCCTGG +
Preference number: 2 (lower is better)
Translates to: TRRLLGISRKFQRSS*RLKGDSKHRCRKSW
Trigger: CCAGGATTTCCTACAGCGATGTTTAGAATCCCCCTTTAGCCGCAAACTAGATCTCTGGAATTTCCTCGATATTCCAAGAAGCCGCCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR CAA 90 bp AGGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTaGGGTGCTCTGTTTCCGTTTTCGCCCTCTGAAATTCCAGGCTTT +
Preference number: 2 (lower is better)
Translates to: RLTYVETAKANSIFI*GALFPFSPSEIPGF
Trigger: AAAGCCTGGAATTTCAGAGGGCGAAAACGGAAACAGAGCACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
3UTR-3UTR TCA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCGCCACTGCTGTTTGTTaGAAGTGTCATTGGCTTGTA +
Preference number: 2 (lower is better)
Translates to: SVECKYCTGKMQACFPKCATAVC*KCHWLV
Trigger: TACAAGCCAATGACACTTTCAACAAACAGCAGTGGC...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR GCA 90 bp TCCATGCGCTCACAGTCGAGGCTGACCTCACTCGTGTCCATACTACAGTCTGACGTCCTAATACATTCTTaGATCAAACTTGCACTGGAT +
Preference number: 2 (lower is better)
Translates to: SMRSQSRLTSLVSILQSDVLIHS*IKLALD
Trigger: ATCCAGTGCAAGTTTGATGCAAGAATGTATTAGGAC...GTCAGACTGTAGTATGGACACGAGTGAGGTCAGCCTCGACTGTGAGCGCATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR GCA 90 bp CTCTCCTGTGTTTCTATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTCTCCCTGTAGCTCTCTaGTCCCGGTGGTGGGATTTA +
Preference number: 2 (lower is better)
Translates to: LSCVSINSVIDRVMVSLPLPVAL*SRWWDL
Trigger: TAAATCCCACCACCGGGAGCAGAGAGCTACAGGGAG...AGGAAGAGAGACCATGACTCTATCGATGACACTGTTTATAGAAACACAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR CCA 90 bp CTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAAGCCTTCTTGTTATCCTaGCAGGCCTTCCTAAGCCCT +
Preference number: 2 (lower is better)
Translates to: LGTKVQIRETGPTCILSQAFLLS*QAFLSP
Trigger: AGGGCTTAGGAAGGCCTGCCAGGATAACAAGAAGGC...TTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR TCA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCGCAGATGAAACACAATaGATACAGGGCCTTCTTGTT +
Preference number: 2 (lower is better)
Translates to: SVECKYCTGKMQACFPKCADETQ*IQGLLV
Trigger: AACAAGAAGGCCCTGTATTCATTGTGTTTCATCTGC...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR GCA 90 bp CAGATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTGGCAGGCCTTCCTACAGATGAGTTCCTCATaGCCTATTTACAAGGCCGTC +
Preference number: 2 (lower is better)
Translates to: QMKHNEYRAFLLSWQAFLQMSSS*PIYKAV
Trigger: GACGGCCTTGTAAATAGGGCATGAGGAACTCATCTG...TAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR GCA 90 bp GATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCTCTATTGTCCTAATACATTCTTaGATCAAACTTGCACTGGAT +
Preference number: 2 (lower is better)
Translates to: DSELAAASVLALLRSASIVLIHS*IKLALD
Trigger: ATCCAGTGCAAGTTTGATGCAAGAATGTATTAGGAC...AATAGAGGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR TCA 90 bp GGCTTTCCTCTGCTTCTGTCTGCAGCAGGTTCACTTGCTGTATCAATAACGACTCTTTGGGTTCTATTCTaGTGTTTTAGGCTAGCAACC +
Preference number: 2 (lower is better)
Translates to: GFPLLLSAAGSLAVSITTLWVLF*CFRLAT
Trigger: GGTTGCTAGCCTAAAACATCAGAATAGAACCCAAAG...AGTCGTTATTGATACAGCAAGTGAACCTGCTGCAGACAGAAGCAGAGGAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR-3UTR GCA 90 bp ATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTTGTTGCTTCATTCATGGTAAGATGCAGGCCTaGTTCCCGAAGTGCACATGC +
Preference number: 2 (lower is better)
Translates to: INSVIDRVMVSLPCCFIHGKMQA*FPKCTC
Trigger: GCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACC...ATGAATGAAGCAACAAGGAAGAGAGACCATGACTCTATCGATGACACTGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR CCA 90 bp TTCTGTCAGACGTTACTTTCACCGTGCCTGCTGTTTCCACAGGAAGAGTCTGTCAAACCGTTCCATCTGTaGAATGCAAATACTGTACAG +
Preference number: 2 (lower is better)
Translates to: FCQTLLSPCLLFPQEESVKPFHL*NANTVQ
Trigger: CTGTACAGTATTTGCATTCCACAGATGGAACGGTTT...GACAGACTCTTCCTGTGGAAACAGCAGGCACGGTGAAAGTAACGTCTGACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR CCA 90 bp GACTCGGGAAAGGGGTTTGACCCGTTTATTACTAGGCTCACTTATGTCGAGACTACAGCATCTTCATCTTaGGTGCTCTGTTTCCGTTTT +
Preference number: 2 (lower is better)
Translates to: DSGKGFDPFITRLTYVETTASSS*VLCFRF
Trigger: AAAACGGAAACAGAGCACCCAAGATGAAGATGCTGT...AGTCTCGACATAAGTGAGCCTAGTAATAAACGGGTCAAACCCCTTTCCCGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477833.5
ENST00000486829.1
3UTR-3UTR TCA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCATCCCAATACACAGATaGGTTCCTCATGCCCTATTT +
Preference number: 2 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSIPIHR*VPHALF
Trigger: AAATAGGGCATGAGGAACTCATCTGTGTATTGGGAT...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR TCA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCCAAACTTGCACTGGATaGAGTTGCAAAGTTCAGACA +
Preference number: 2 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSQTCTG*SCKVQT
Trigger: TGTCTGAACTTTGCAACTTCATCCAGTGCAAGTTTG...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR TCA 90 bp CAGATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTGGCAGGCCTTCCTACAAACTTGCACTGGATaGAGTTGCAAAGTTCAGACA +
Preference number: 2 (lower is better)
Translates to: QMKHNEYRAFLLSWQAFLQTCTG*SCKVQT
Trigger: TGTCTGAACTTTGCAACTTCATCCAGTGCAAGTTTG...TAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR CCA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGTACCAGGCGGCTTCTTaGAATATCGAGGAAATTCCA +
Preference number: 2 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQYQAAS*NIEEIP
Trigger: TGGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTA...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR CCA 90 bp TGTTTCCGTTTTCGCCCTCTGAAATTCCAGGCTTTAGGAGAGGGAAACATGGGAATTCTCAGTTTGTTCTaGAATCTTAGGAGTCGAAGG +
Preference number: 2 (lower is better)
Translates to: CFRFRPLKFQALGEGNMGILSLF*NLRSRR
Trigger: CCTTCGACTCCTAAGATTCCAGAACAAACTGAGAAT...TCCCATGTTTCCCTCTCCTAAAGCCTGGAATTTCAGAGGGCGAAAACGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
3UTR-3UTR GCA 90 bp ACTGTAAATCAAGGCTGGACAAAGAGGTTACTAATCTGGCTAGCTGATTCTAATGAAGGCACTGGACCATaGTTTTCTCTCAATGGCTCC +
Preference number: 2 (lower is better)
Translates to: TVNQGWTKRLLIWLADSNEGTGP*FSLNGS
Trigger: GGAGCCATTGAGAGAAAAGCATGGTCCAGTGCCTTC...ATTAGAATCAGCTAGCCAGATTAGTAACCTCTTTGTCCAGCCTTGATTTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR-3UTR CCA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCAAACCGTTCCATCTGTaGAATGCAAATACTGTACAG +
Preference number: 2 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSKPFHL*NANTVQ
Trigger: CTGTACAGTATTTGCATTCCACAGATGGAACGGTTT...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR-3UTR CCA 90 bp CAGATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTGGCAGGCCTTCCTAGCATCAAACTTGCACTaGATGAAGTTGCAAAGTTCA +
Preference number: 2 (lower is better)
Translates to: QMKHNEYRAFLLSWQAFLASNLH*MKLQSS
Trigger: TGAACTTTGCAACTTCATCCAGTGCAAGTTTGATGC...TAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR CCA 90 bp ACCCGTTTATTACTAGGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTACAGCATCTTCATCTTaGGTGCTCTGTTTCCGTTTT +
Preference number: 2 (lower is better)
Translates to: TRLLLGSLMSRLQRLTASTASSS*VLCFRF
Trigger: AAAACGGAAACAGAGCACCCAAGATGAAGATGCTGT...AGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCCTAGTAATAAACGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477833.5
ENST00000486829.1
3UTR-3UTR GCA 90 bp ACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTGTTCCATCTGTGGAATaGAAATACTGTACAGGTAAG +
Preference number: 2 (lower is better)
Translates to: TDSSLHRQIGSYSTRDKGVPSVE*KYCTGK
Trigger: CTTACCTGTACAGTATTTGCATTCCACAGATGGAAC...ACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR-3UTR GCA 90 bp GCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGAGTTCCATCTGTGGAATaGAAATACTGTACAGGTAAG +
Preference number: 2 (lower is better)
Translates to: AYTDRLAVTVLGTKVQIRVPSVE*KYCTGK
Trigger: CTTACCTGTACAGTATTTGCATTCCACAGATGGAAC...TCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR-3UTR GCA 90 bp CCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAAAAGTATGAAAAAGTaGTTCTCCAAACCGTTCCAT +
Preference number: 2 (lower is better)
Translates to: PLHPSRHLGNTTQGNSCHKSMKK*FSKPFH
Trigger: ATGGAACGGTTTGGAGAAGCACTTTTTCATACTTTT...GTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR-3UTR GCA 90 bp ATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTTGTTGCTTCATTCATCAGATGAGTTCCTCATaGCCTATTTACAAGGCCGTC +
Preference number: 2 (lower is better)
Translates to: INSVIDRVMVSLPCCFIHQMSSS*PIYKAV
Trigger: GACGGCCTTGTAAATAGGGCATGAGGAACTCATCTG...ATGAATGAAGCAACAAGGAAGAGAGACCATGACTCTATCGATGACACTGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR GCA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGCTTGGTGTTGATTTCTaGCACAATTCCCTGAATGAT +
Preference number: 2 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQLGVDF*HNSLND
Trigger: ATCATTCAGGGAATTGTGGCAGAAATCAACACCAAG...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR CCA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGAAACCGTTCCATCTGTaGAATGCAAATACTGTACAG +
Preference number: 2 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQKPFHL*NANTVQ
Trigger: CTGTACAGTATTTGCATTCCACAGATGGAACGGTTT...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR-3UTR CCA 90 bp TTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAAAACCGTTCCATCTGTaGAATGCAAATACTGTACAG +
Preference number: 2 (lower is better)
Translates to: LFEYLSIHPDTWEIQHRVKPFHL*NANTVQ
Trigger: CTGTACAGTATTTGCATTCCACAGATGGAACGGTTT...TACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
3UTR-3UTR CCA 90 bp CTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACACAGATACGAGAGACTaGGCCAACATGTATACTTTC +
Preference number: 2 (lower is better)
Translates to: LKVTCLSTSPSIQTLGKYTDTRD*ANMYTF
Trigger: GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGT...GTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
3UTR-3UTR CCA 90 bp CTTGTTATCCTGGCAGGCCTTCCTAAGCCCTTTGGGTTCTATTCTGATGTTTTAGTTCACTTCATGAGTTaGTCTTTCCTGATTCTCTCT +
Preference number: 2 (lower is better)
Translates to: LVILAGLPKPFGFYSDVLVHFMS*SFLILS
Trigger: AGAGAGAATCAGGAAAGACCAACTCATGAAGTGAAC...TAAAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGCCTGCCAGGATAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR GCA 90 bp ACAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAGTTCCATCTGTGGAATaGAAATACTGTACAGGTAAG +
Preference number: 2 (lower is better)
Translates to: TTESNLFEYLSIHPDTWEVPSVE*KYCTGK
Trigger: CTTACCTGTACAGTATTTGCATTCCACAGATGGAAC...TTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
3UTR-3UTR CCA 90 bp AAATTAGGCCCACTGAGTAATGTTACAGATGAATCCACATTCCAGTTGACCATTTTGACTTCAAGACCGTaGCTTTTCTCTTTCCACCAG +
Preference number: 2 (lower is better)
Translates to: KLGPLSNVTDESTFQLTILTSRP*LFSFHQ
Trigger: CTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAA...AATGGTCAACTGGAATGTGGATTCATCTGTAACATTACTCAGTGGGCCTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495373.5
3UTR-3UTR TCA 90 bp ACTGTAAATCAAGGCTGGACAAAGAGGTTACTAATCTGGCTAGCTGATTCTAATCTTTGGGTTCTATTCTaGTGTTTTAGGCTAGCAACC +
Preference number: 2 (lower is better)
Translates to: TVNQGWTKRLLIWLADSNLWVLF*CFRLAT
Trigger: GGTTGCTAGCCTAAAACATCAGAATAGAACCCAAAG...ATTAGAATCAGCTAGCCAGATTAGTAACCTCTTTGTCCAGCCTTGATTTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR-3UTR TCA 90 bp ATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTTGTTGCTTCATTCATGCAGATGAAACACAATaGATACAGGGCCTTCTTGTT +
Preference number: 2 (lower is better)
Translates to: INSVIDRVMVSLPCCFIHADETQ*IQGLLV
Trigger: AACAAGAAGGCCCTGTATTCATTGTGTTTCATCTGC...ATGAATGAAGCAACAAGGAAGAGAGACCATGACTCTATCGATGACACTGTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR GCA 90 bp GATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAAAAAGTATGAAAAAGTaGTTCTCCAAACCGTTCCAT +
Preference number: 2 (lower is better)
Translates to: DSSLHRQIGSYSTRDKGTKSMKK*FSKPFH
Trigger: ATGGAACGGTTTGGAGAAGCACTTTTTCATACTTTT...TGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR-3UTR GCA 90 bp ACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGAAAAAGTATGAAAAAGTaGTTCTCCAAACCGTTCCAT +
Preference number: 2 (lower is better)
Translates to: TWEIQHRVIVATDSSLHRKSMKK*FSKPFH
Trigger: ATGGAACGGTTTGGAGAAGCACTTTTTCATACTTTT...TCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR-3UTR TCA 90 bp ACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCTTGGCTTCTTTTAGTCATACAAATGCAGTTTaGCTTCAAGACCGTGGCTTT +
Preference number: 2 (lower is better)
Translates to: TEYHVRYSIDIAILASFSHTNAV*LQDRGF
Trigger: AAAGCCACGGTCTTGAAGTCAAACTGCATTTGTATG...ACTAAAAGAAGCCAAGATAGCAATATCTATCGAGTATCTAACATGATACTCGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
3UTR GCA 72 bp AGGTCTCACTCCACAGCTTGCTATCTCTCCGTTTCGTaGTCGAGGGGGCGGCATTTCTGGACCAGGGTCGGG +
Preference number: 3 (lower is better)
Translates to: RSHSTACYLSVS*SRGRHFWTRVG
Trigger: CCCGACCCTGGTCCAGAAATGCCGCCCCCTCGAGCACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477833.5
3UTR GCA 72 bp ACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATaGTTCTGTCAGACGTTACTTTCACCGTGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: TGKMQACFPKCT*FCQTLLSPCLL
Trigger: CAGCAGGCACGGTGAAAGTAACGTCTGACAGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR TCA 72 bp AAGAGTCTGTCTGTTCCATGCGCTCACAGTCGAGGCTaGCCTCACTCGTGTCCATACTACAGTCTGACTCAC +
Preference number: 3 (lower is better)
Translates to: KSLSVPCAHSRG*PHSCPYYSLTH
Trigger: GTGAGTCAGACTGTAGTATGGACACGAGTGAGGTCAGCCTCGACTGTGAGCGCATGGAACAGACAGACTCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR CAA 90 bp ACTCCACAGCTTGCTATCTCTCCGTTTCGTGCTCGAGGGGGCGGCATTTCTGGAAACAGCATCTTCATCTaGGGTGCTCTGTTTCCGTTT +
Preference number: 3 (lower is better)
Translates to: TPQLAISPFRARGGGISGNSIFI*GALFPF
Trigger: AAACGGAAACAGAGCACCCAAGATGAAGATGCTGTT...TCCAGAAATGCCGCCCCCTCGAGCACGAAACGGAGAGATAGCAAGCTGTGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477833.5
3UTR-3UTR CAA 90 bp AGATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCTCTATGCTTACACAGACAGATaGGCAGTTACAGTACTAGGG +
Preference number: 3 (lower is better)
Translates to: RFRAGSRFCPGPFKVSLYAYTDR*AVTVLG
Trigger: CCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC...ATAGAGGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR TCA 72 bp TGCAGTTTCACGCCCCGATTGTTCTTCAGTTCACCATaGCAACACAAGACTCGAGAGCTGTCGATCAGGGAG +
Preference number: 3 (lower is better)
Translates to: CSFTPRLFFSSP*QHKTRELSIRE
Trigger: CTCCCTGATCGACAGCTCTCGAGTCTTGTGTTGTCATGGTGAACTGAAGAACAATCGGGGCGTGAAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR TCA 72 bp GTCGAGGCTGACCTCACTCGTGTCCATACTACAGTCTaGCTCACTGTCCGATTGGTCCATCTGCTCAAGTTT +
Preference number: 3 (lower is better)
Translates to: VEADLTRVHTTV*LTVRLVHLLKF
Trigger: AAACTTGAGCAGATGGACCAATCGGACAGTGAGTCAGACTGTAGTATGGACACGAGTGAGGTCAGCCTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR GCA 72 bp GCACATGCTTCTGTCAGACGTTACTTTCACCGTGCCTaGTGTTTCCACAGGAAGAGTCTGTCTGTTCCATGC +
Preference number: 3 (lower is better)
Translates to: AHASVRRYFHRA*CFHRKSLSVPC
Trigger: GCATGGAACAGACAGACTCTTCCTGTGGAAACAGCAGGCACGGTGAAAGTAACGTCTGACAGAAGCATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR GCA 72 bp TACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTaGACATGCTTCTGTCAGACGTTACTTTCACCGTGC +
Preference number: 3 (lower is better)
Translates to: YCTGKMQACFPK*TCFCQTLLSPC
Trigger: GCACGGTGAAAGTAACGTCTGACAGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR GCA 72 bp AAGTGCACATGCTTCTGTCAGACGTTACTTTCACCGTaGCTGCTGTTTCCACAGGAAGAGTCTGTCTGTTCC +
Preference number: 3 (lower is better)
Translates to: KCTCFCQTLLSP*LLFPQEESVCS
Trigger: GGAACAGACAGACTCTTCCTGTGGAAACAGCAGGCACGGTGAAAGTAACGTCTGACAGAAGCATGTGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR CAA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCTTACCAGGCGGCTTCTaGGAATATCGAGGAAATTCC +
Preference number: 3 (lower is better)
Translates to: SVECKYCTGKMQACFPKCLPGGF*EYRGNS
Trigger: GGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTAA...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR CCA 72 bp CTCGTGTCCATACTACAGTCTGACTCACTGTCCGATTaGTCCATCTGCTCAAGTTTTGTTTCTCCCTGTAGC +
Preference number: 3 (lower is better)
Translates to: LVSILQSDSLSD*SICSSFVSPCS
Trigger: GCTACAGGGAGAAACAAAACTTGAGCAGATGGACCAATCGGACAGTGAGTCAGACTGTAGTATGGACACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR CCA 72 bp GAAATAGCATACAAATGCAGTTTGACTTCAAGACCGTaGCTTTTCTCTTTCCACCAGCTGCCCACTCCCTCC +
Preference number: 3 (lower is better)
Translates to: EIAYKCSLTSRP*LFSFHQLPTPS
Trigger: GGAGGGAGTGGGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTATGCTATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
3UTR-3UTR CAA 90 bp GTTAAAGATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCGGTGTGGGTATAATTTaGCACAGGTCATCCTTAATA +
Preference number: 3 (lower is better)
Translates to: VKDSELAAASVLALLRSAGVGII*HRSSLI
Trigger: TATTAAGGATGACCTGTGCAAAATTATACCCACACC...GGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATCTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR-3UTR CAA 90 bp TTCTGTCAGACGTTACTTTCACCGTGCCTGCTGTTTCCACAGGAAGAGTCTGTCTTGCACTGGATGAAGTaGCAAAGTTCAGACAATGCA +
Preference number: 3 (lower is better)
Translates to: FCQTLLSPCLLFPQEESVLHWMK*QSSDNA
Trigger: TGCATTGTCTGAACTTTGCAACTTCATCCAGTGCAA...GACAGACTCTTCCTGTGGAAACAGCAGGCACGGTGAAAGTAACGTCTGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR CCA 72 bp CTAAATTCCGTGCCTTTAGCTACCACATCTAAGAGCTaGGAAAGTGGTACAGAAGCACAAGAGGAAGGACTC +
Preference number: 3 (lower is better)
Translates to: LNSVPLATTSKS*ESGTEAQEEGL
Trigger: GAGTCCTTCCTCTTGTGCTTCTGTACCACTTTCCCAGCTCTTAGATGTGGTAGCTAAAGGCACGGAATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR CCA 72 bp TTTCTCAGAAGGCACTGGACCATGCTTTTCTCTCAATaGCTCCCACAGAAGGTTCTGACGAAGTGCTTTTCA +
Preference number: 3 (lower is better)
Translates to: FLRRHWTMLFSQ*LPQKVLTKCFS
Trigger: TGAAAAGCACTTCGTCAGAACCTTCTGTGGGAGCCATTGAGAGAAAAGCATGGTCCAGTGCCTTCTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR CAA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCTTACACAGACAGATaGGCAGTTACAGTACTAGGG +
Preference number: 3 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQAYTDR*AVTVLG
Trigger: CCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR-3UTR CAA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGCATCCATCCAGACACTaGGGAAATACAACACAGGGT +
Preference number: 3 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQHPSRH*GNTTQG
Trigger: ACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR-3UTR CAA 90 bp GGCTTTCCTCTGCTTCTGTCTGCAGCAGGTTCACTTGCTGTATCAATAACGACTTTGCACTGGATGAAGTaGCAAAGTTCAGACAATGCA +
Preference number: 3 (lower is better)
Translates to: GFPLLLSAAGSLAVSITTLHWMK*QSSDNA
Trigger: TGCATTGTCTGAACTTTGCAACTTCATCCAGTGCAA...AGTCGTTATTGATACAGCAAGTGAACCTGCTGCAGACAGAAGCAGAGGAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR-3UTR CAA 90 bp ATTGTTCTTCAGTTCACCATGACAACACAAGACTCGAGAGCTGTCGATCAGGGATCAGATTCACCAGTCTaGGTGTTGATTTCTGCCACA +
Preference number: 3 (lower is better)
Translates to: IVLQFTMTTQDSRAVDQGSDSPV*VLISAT
Trigger: TGTGGCAGAAATCAACACCAAGACTGGTGAATCTGA...TCCCTGATCGACAGCTCTCGAGTCTTGTGTTGTCATGGTGAACTGAAGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR CAA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCGATCACAAGCACTTCTaGGAACAGGAAAACATGCAG +
Preference number: 3 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSDHKHF*EQENMQ
Trigger: CTGCATGTTTTCCTGTTCCAAGAAGTGCTTGTGATC...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR GCA 72 bp TCCAGACACTTGGGAAATACAACACAGGGTAATAGTTaGCACAGATTCCAGCTTACACAGACAGATTGGCAG +
Preference number: 3 (lower is better)
Translates to: SRHLGNTTQGNS*HRFQLTQTDWQ
Trigger: CTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
3UTR CCA 72 bp ATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTaGCAGGCCTTCCTAAGCCCTTTGGGTTCTATTCTG +
Preference number: 3 (lower is better)
Translates to: MKHNEYRAFLLS*QAFLSPLGSIL
Trigger: CAGAATAGAACCCAAAGGGCTTAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR CAA 90 bp CTCTCCTGTGTTTCTATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTTTCCAGAGATCTAGTTaGCGGCTAAAGGGGGATTCT +
Preference number: 3 (lower is better)
Translates to: LSCVSINSVIDRVMVSLPFQRSS*RLKGDS
Trigger: AGAATCCCCCTTTAGCCGCAAACTAGATCTCTGGAA...AGGAAGAGAGACCATGACTCTATCGATGACACTGTTTATAGAAACACAGGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR CAA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTTTTTTAATTCTCTCATaGTTGCTGAATGCCCCTCGC +
Preference number: 3 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLAFLILS*LLNAPR
Trigger: GCGAGGGGCATTCAGCAACAATGAGAGAATTAAAAA...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR CAA 90 bp CCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACGAGTGGGTCTGACTTaGGGATCCATTTTTGAAACT +
Preference number: 3 (lower is better)
Translates to: PDTWEIQHRVIVATDSSLRVGLT*GSIFET
Trigger: AGTTTCAAAAATGGATCCCAAAGTCAGACCCACTCG...TAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR TCA 72 bp AATTCTGATTATAGCACAGAACCAGAGATGGCAAATTaGCGACCCAAAAGCAGAGCAGGAAAGCCCAAAGCT +
Preference number: 3 (lower is better)
Translates to: NSDYSTEPEMAN*RPKSRAGKPKA
Trigger: AGCTTTGGGCTTTCCTGCTCTGCTTTTGGGTCGTCAATTTGCCATCTCTGGTTCTGTGCTATAATCAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR-3UTR CAA 90 bp ATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCCTGAAAGTAACTTGTTaGAGTACCTCTCCATCCATC +
Preference number: 3 (lower is better)
Translates to: IHPDTWEIQHRVIVATDSLKVTC*STSPSI
Trigger: GATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG...GGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
3UTR-3UTR CAA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCACAACTGAAAGTAACTaGTTTGAGTACCTCTCCATC +
Preference number: 3 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSTTESN*FEYLSI
Trigger: GATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
3UTR-3UTR CAA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCGGTCTCTCTTCCTTGTaGCTTCATTCATTCTCTAAA +
Preference number: 3 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSGLSSL*LHSFSK
Trigger: TTTAGAGAATGAATGAAGCAACAAGGAAGAGAGACC...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR CAA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGTTAAGCCACTGCTGTTaGTTGAAAGTGTCATTGGCT +
Preference number: 3 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQLSHCC*LKVSLA
Trigger: AGCCAATGACACTTTCAACAAACAGCAGTGGCTTAA...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR TCA 72 bp TTCCCAACACACTGGCTGATGGCTTCTAAAAGTGGCTaGTGGCGCCTACAAAGAATCATTCATTCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: FPTHWLMASKSG*WRLQRIIHSFL
Trigger: AAGAAAAGAATGAATGATTCTTTGTAGGCGCCATCAGCCACTTTTAGAAGCCATCAGCCAGTGTGTTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR TCA 72 bp TTGTTGAAAGTGTCATTGGCTTGTAGCGAGTGGGTCTaGCTTTGGGATCCATTTTTGAAACTGACTCTGAAG +
Preference number: 3 (lower is better)
Translates to: LLKVSLACSEWV*LWDPFLKLTLK
Trigger: CTTCAGAGTCAGTTTCAAAAATGGATCCCAAAGTCAGACCCACTCGCTACAAGCCAATGACACTTTCAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR CCA 72 bp AACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTaGGAAATACAACACAGGGTAATAGTTGCCACAGAT +
Preference number: 3 (lower is better)
Translates to: NLFEYLSIHPDT*EIQHRVIVATD
Trigger: ATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
3UTR-3UTR CAA 90 bp CTTGTTATCCTGGCAGGCCTTCCTAAGCCCTTTGGGTTCTATTCTGATGTTTTATGTCCTAATACATTCTaGCATCAAACTTGCACTGGA +
Preference number: 3 (lower is better)
Translates to: LVILAGLPKPFGFYSDVLCPNTF*HQTCTG
Trigger: TCCAGTGCAAGTTTGATGCAAGAATGTATTAGGACA...TAAAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGCCTGCCAGGATAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR-3UTR CAA 90 bp CTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAACTTTGGGATCCATTTTaGAAACTGACTCTGAAGAAG +
Preference number: 3 (lower is better)
Translates to: LGTKVQIRETGPTCILSQLWDPF*KLTLKK
Trigger: CTTCTTCAGAGTCAGTTTCAAAAATGGATCCCAAAG...TTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465659.5
3UTR-3UTR CAA 90 bp GTTGACCATTCTTATGTCTCTTTAGGGACAAGTTTACCAGTTCAGCTGCAAAACGCATACAAATGCAGTTaGACTTCAAGACCGTGGCTT +
Preference number: 3 (lower is better)
Translates to: VDHSYVSLGTSLPVQLQNAYKCS*TSRPWL
Trigger: AAGCCACGGTCTTGAAGTCAAACTGCATTTGTATGC...GTTTTGCAGCTGAACTGGTAAACTTGTCCCTAAAGAGACATAAGAATGGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
3UTR-3UTR CAA 90 bp ACTAGTGCTGGTGTGGGTATAATTTTGCACAGGTCATCCTTAATATTTACACTTGCTTACACAGACAGATaGGCAGTTACAGTACTAGGG +
Preference number: 3 (lower is better)
Translates to: TSAGVGIILHRSSLIFTLAYTDR*AVTVLG
Trigger: CCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC...AAGTGTAAATATTAAGGATGACCTGTGCAAAATTATACCCACACCAGCACTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR-3UTR CAA 90 bp ATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTTGTTGCTTCATTCATGCCTTCCTAAGCCCTTaGGGTTCTATTCTGATGTTT +
Preference number: 3 (lower is better)
Translates to: INSVIDRVMVSLPCCFIHAFLSP*GSILMF
Trigger: AAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGC...ATGAATGAAGCAACAAGGAAGAGAGACCATGACTCTATCGATGACACTGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR TCA 72 bp TTCAGAATCCCCAGGGATGTTTTCAAGCTTTCTAGTTaGGTAAGATCAAACCAAGTTCACTTCATGAGTTGG +
Preference number: 3 (lower is better)
Translates to: FRIPRDVFKLSS*VRSNQVHFMSW
Trigger: CCAACTCATGAAGTGAACTTGGTTTGATCTTACTCAACTAGAAAGCTTGAAAACATCCCTGGGGATTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR TCA 72 bp TGTCCTAATACATTCTTGCATCAAACTTGCACTGGATaGAGTTGCAAAGTTCAGACAATGCATCCTCCTTTG +
Preference number: 3 (lower is better)
Translates to: CPNTFLHQTCTG*SCKVQTMHPPL
Trigger: CAAAGGAGGATGCATTGTCTGAACTTTGCAACTTCATCCAGTGCAAGTTTGATGCAAGAATGTATTAGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
3UTR TCA 72 bp AGGTACCTATGCATTTCCATTTTGGAGATGAGAAACTaGGAATCACAGGGACTAAACAAAGTACATAATCAG +
Preference number: 3 (lower is better)
Translates to: RYLCISILEMRN*ESQGLNKVHNQ
Trigger: CTGATTATGTACTTTGTTTAGTCCCTGTGATTCTCAGTTTCTCATCTCCAAAATGGAAATGCATAGGTACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp TCACAGTCGAGGCTGACCTCACTCGTGTCCATACTACAGTCTGACTCACTGTCCCCTTGGCCGGACCGCTaGCCGGGGGTAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SQSRLTSLVSILQSDSLSPWPDR*PGVAPG
Trigger: GCCTGGAGCTACCCCCGGCCAGCGGTCCGGCCAAGG...GGACAGTGAGTCAGACTGTAGTATGGACACGAGTGAGGTCAGCCTCGACTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR CCA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACGCTCCTCAGCGTCCTTaGCCGGACCGCTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYAPQRP*PDRWPG
Trigger: CCCCGGCCAGCGGTCCGGCCAAGGACGCTGAGGAGC...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS-3UTR CCA 90 bp ATACAAATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCGCTCCTCAGCGTCCTTaGCCGGACCGCTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: IQMQFDFKTVAFLFPPAAAPQRP*PDRWPG
Trigger: CCCCGGCCAGCGGTCCGGCCAAGGACGCTGAGGAGC...GGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp CAGATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTGGCAGGCCTTCCTAGGCGGCTGCCGGGCCTaGCCTTTGGGATGTCACCGC +
Preference number: 4 (lower is better)
Translates to: QMKHNEYRAFLLSWQAFLGGCRA*PLGCHR
Trigger: GCGGTGACATCCCAAAGGGCAGGCCCGGCAGCCGCC...TAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS-3UTR GCA 90 bp GGAAGAGTCTGTCTGTTCCATGCGCTCACAGTCGAGGCTGACCTCACTCGTGTCGGTAAGATGCAGGCCTaGTTCCCGAAGTGCACATGC +
Preference number: 4 (lower is better)
Translates to: GRVCLFHALTVEADLTRVGKMQA*FPKCTC
Trigger: GCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACC...GACACGAGTGAGGTCAGCCTCGACTGTGAGCGCATGGAACAGACAGACTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR CCA 90 bp CATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCGCTCCTCAGCGTCCTTaGCCGGACCGCTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HPSRHLGNTTQGNSCHRFAPQRP*PDRWPG
Trigger: CCCCGGCCAGCGGTCCGGCCAAGGACGCTGAGGAGC...GAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS-3UTR TCA 90 bp TCGGAGTCAAGCACCCCAGCTTGCCCGGCAGCACACAAAACTGTTTCTTTGGCTGAGCGCTGCAGGGTTTaGCTGAAGCGCTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: SESSTPACPAAHKTVSLAERCRV*LKRFNG
Trigger: GCCATTAAAGCGCTTCAGTCAAACCCTGCAGCGCTC...AGCCAAAGAAACAGTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGACTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR GCA 90 bp GGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACGGCGGCTGCCGGGCCTaGCCTTTGGGATGTCACCGC +
Preference number: 4 (lower is better)
Translates to: GNSCHRFQLTQTDWQLQYGGCRA*PLGCHR
Trigger: GCGGTGACATCCCAAAGGGCAGGCCCGGCAGCCGCC...GTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS-3UTR GCA 90 bp GGCGAGGATGTCAGGGCGGCTCTCACTGCGGAAGCTAATGGAGCGCTGCAGGGTGCTGCATTGATTCATTaGTGTGGAACTGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: GEDVRAALTAEANGALQGAALIH*CGTVHR
Trigger: TCTATGGACAGTTCCACAGCAATGAATCAATGCAGC...ACCCTGCAGCGCTCCATTAGCTTCCGCAGTGAGAGCCGCCCTGACATCCTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR CCA 90 bp ACAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAACCTTGGCCGGACCGCTaGCCGGGGGTAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TTESNLFEYLSIHPDTWEPWPDR*PGVAPG
Trigger: GCCTGGAGCTACCCCCGGCCAGCGGTCCGGCCAAGG...TTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS-3UTR CCA 90 bp TGTTTCCGTTTTCGCCCTCTGAAATTCCAGGCTTTAGGAGAGGGAAACATGGGATCGGCCTCTCCAGGCTaGAAAACTCACCGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: CFRFRPLKFQALGEGNMGSASPG*KTHRGG
Trigger: GCCGCCGCGGTGAGTTTTCCAGCCTGGAGAGGCCGA...TCCCATGTTTCCCTCTCCTAAAGCCTGGAATTTCAGAGGGCGAAAACGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR CCA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGCCTCGACCCCCGCGCTaGTTCGGCCTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTPRPPR*FGLSRL
Trigger: CAGCCTGGAGAGGCCGAACCAGCGCGGGGGTCGAGG...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338458.8
CDS-3UTR CCA 90 bp TTACTAGGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGCCTCGACCCCCGCGCTaGTTCGGCCTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLGSLMSRLQRLTASSSWPRPPR*FGLSRL
Trigger: CAGCCTGGAGAGGCCGAACCAGCGCGGGGGTCGAGG...CCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCCTAGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR GCA 90 bp GGCGGGATGAGGTTTGCTAGCGACGTGACTCGGGAAAGGGGTTTGACCCGTTTATCTCACTCCACAGCTTaGTATCTCTCCGTTTCGTGC +
Preference number: 4 (lower is better)
Translates to: GGMRFASDVTRERGLTRLSHSTA*YLSVSC
Trigger: GCACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGA...TAAACGGGTCAAACCCCTTTCCCGAGTCACGTCGCTAGCAAACCTCATCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR GCA 90 bp TTTCCACCAGCTGCCCACTCCCTCCAAACTACCACGGCCAAAAACATTCAACAGCTCATTGTTGCTGAATaGCCCTCGCAGGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: FPPAAHSLQTTTAKNIQQLIVAE*PSQGAT
Trigger: GGTGGCTCCCTGCGAGGGGCATTCAGCAACAATGAG...CTGTTGAATGTTTTTGGCCGTGGTAGTTTGGAGGGAGTGGGCAGCTGGTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp ACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTAATCCTTGGCCACCATaGCGGCTGCCGGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TDSSLHRQIGSYSTRDKGNPWPP*RLPGLP
Trigger: GGGCAGGCCCGGCAGCCGCCATGGTGGCCAAGGATT...ACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS-3UTR CCA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAGAAGGGGTAATCCTTaGCCACCATGGCGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VPSVECKYCTGKMQACFPRRGNP*PPWRLP
Trigger: CGGCAGCCGCCATGGTGGCCAAGGATTACCCCTTCT...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS-3UTR CCA 90 bp GTTGACCATTCTTATGTCTCTTTAGGGACAAGTTTACCAGTTCAGCTGCAAAACCCTTGGCCGGACCGCTaGCCGGGGGTAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VDHSYVSLGTSLPVQLQNPWPDR*PGVAPG
Trigger: GCCTGGAGCTACCCCCGGCCAGCGGTCCGGCCAAGG...GTTTTGCAGCTGAACTGGTAAACTTGTCCCTAAAGAGACATAAGAATGGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR TCA 90 bp TTTCCACCAGCTGCCCACTCCCTCCAAACTACCACGGCCAAAAACATTCAACAGGCTGCAGGGTTTGACTaGAGCGCTTTAATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: FPPAAHSLQTTTAKNIQQAAGFD*SALMAW
Trigger: CCACGCCATTAAAGCGCTTCAGTCAAACCCTGCAGC...CTGTTGAATGTTTTTGGCCGTGGTAGTTTGGAGGGAGTGGGCAGCTGGTGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR TCA 90 bp GGCGGGATGAGGTTTGCTAGCGACGTGACTCGGGAAAGGGGTTTGACCCGTTTAAGTTGTTCCTGCCATTaGTTGCGCTGGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GGMRFASDVTRERGLTRLSCSCH*LRWFQK
Trigger: TTTCTGGAACCAGCGCAATCAATGGCAGGAACAACT...TAAACGGGTCAAACCCCTTTCCCGAGTCACGTCGCTAGCAAACCTCATCCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR TCA 90 bp CCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACACCATGGGGCGCTCTaGCCTCATCCACCCGGACTC +
Preference number: 4 (lower is better)
Translates to: PAYTDRLAVTVLGTKVQIHHGAL*PHPPGL
Trigger: GAGTCCGGGTGGATGAGGTCAGAGCGCCCCATGGTG...TATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496106.5
CDS-3UTR GCA 90 bp CCTGCTGTTTCCACAGGAAGAGTCTGTCTGTTCCATGCGCTCACAGTCGAGGCTTCTCACTCCACAGCTTaGTATCTCTCCGTTTCGTGC +
Preference number: 4 (lower is better)
Translates to: PAVSTGRVCLFHALTVEASHSTA*YLSVSC
Trigger: GCACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGA...AGCCTCGACTGTGAGCGCATGGAACAGACAGACTCTTCCTGTGGAAACAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR GCA 90 bp GTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACACTCATTGTTGCTGAATaGCCCTCGCAGGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: VECKYCTGKMQACFPKCTLIVAE*PSQGAT
Trigger: GGTGGCTCCCTGCGAGGGGCATTCAGCAACAATGAG...TGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp ACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAGCCGGGCCTGCCCTTTaGGATGTCACCGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: TRDKGTDTRDWANMYTFTAGPAL*DVTADP
Trigger: AGGGTCAGCGGTGACATCCCAAAGGGCAGGCCCGGC...TGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS-3UTR CCA 90 bp GCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGAGCCGGGCCTGCCCTTTaGGATGTCACCGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: AYTDRLAVTVLGTKVQIRAGPAL*DVTADP
Trigger: AGGGTCAGCGGTGACATCCCAAAGGGCAGGCCCGGC...TCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS-3UTR CCA 90 bp GCCTTCACGGGCGGGATGAGGTTTGCTAGCGACGTGACTCGGGAAAGGGGTTTGACAGCATCTTCATCTTaGGTGCTCTGTTTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: AFTGGMRFASDVTRERGLTASSS*VLCFRF
Trigger: AAAACGGAAACAGAGCACCCAAGATGAAGATGCTGT...CAAACCCCTTTCCCGAGTCACGTCGCTAGCAAACCTCATCCCGCCCGTGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR TCA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGGCTGCAGGGTTTGACTaGAGCGCTTTAATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: VPSVECKYCTGKMQACFPAAGFD*SALMAW
Trigger: CCACGCCATTAAAGCGCTTCAGTCAAACCCTGCAGC...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GGCGGGATGAGGTTTGCTAGCGACGTGACTCGGGAAAGGGGTTTGACCCGTTTATTGGATGTAAGCATCTaGTTGACGCACACATCGAAG +
Preference number: 4 (lower is better)
Translates to: GGMRFASDVTRERGLTRLLDVSI*LTHTSK
Trigger: CTTCGATGTGTGCGTCAATCAGATGCTTACATCCAA...TAAACGGGTCAAACCCCTTTCCCGAGTCACGTCGCTAGCAAACCTCATCCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR TCA 90 bp GTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATTCTCTCATTGTTGCTaGATGCCCCTCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VECKYCTGKMQACFPKCTFSHCC*MPLAGS
Trigger: GCTCCCTGCGAGGGGCATTCAGCAACAATGAGAGAA...TGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp TCCATGCGCTCACAGTCGAGGCTGACCTCACTCGTGTCCATACTACAGTCTGACTGTAGCGAGTGGGTCTaGCTTTGGGATCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: SMRSQSRLTSLVSILQSDCSEWV*LWDPFL
Trigger: CAAAAATGGATCCCAAAGTCAGACCCACTCGCTACA...GTCAGACTGTAGTATGGACACGAGTGAGGTCAGCCTCGACTGTGAGCGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR GCA 90 bp ACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCTCATTGTTGCTGAATaGCCCTCGCAGGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: TVPSVECKYCTGKMQACFLIVAE*PSQGAT
Trigger: GGTGGCTCCCTGCGAGGGGCATTCAGCAACAATGAG...GAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACACTCCCTGTAGCTCTCTaGTCCCGGTGGTGGGATTTA +
Preference number: 4 (lower is better)
Translates to: VECKYCTGKMQACFPKCTLPVAL*SRWWDL
Trigger: TAAATCCCACCACCGGGAGCAGAGAGCTACAGGGAG...TGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGGCCTGCTTCCCGAAGTaGACATGCTTCTGTCAGACG +
Preference number: 4 (lower is better)
Translates to: VPSVECKYCTGKMQACFPACFPK*TCFCQT
Trigger: CGTCTGACAGAAGCATGTGCACTTCGGGAAGCAGGC...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ACTCCACAGCTTGCTATCTCTCCGTTTCGTGCTCGAGGGGGCGGCATTTCTGGACCATTCCTCTACAGCTaGATTGATTCATTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TPQLAISPFRARGGGISGPFLYS*IDSLLW
Trigger: CCACAGCAATGAATCAATGCAGCTGTAGAGGAATGG...TCCAGAAATGCCGCCCCCTCGAGCACGAAACGGAGAGATAGCAAGCTGTGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR CCA 90 bp AAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAATCCTTGGCCACCATaGCGGCTGCCGGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: KKCFSKPFHLWNANTVQVNPWPP*RLPGLP
Trigger: GGGCAGGCCCGGCAGCCGCCATGGTGGCCAAGGATT...TACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS-3UTR CCA 90 bp ATACAAATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCAGAAGGGGTAATCCTTaGCCACCATGGCGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: IQMQFDFKTVAFLFPPAARRGNP*PPWRLP
Trigger: CGGCAGCCGCCATGGTGGCCAAGGATTACCCCTTCT...GGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp GGCTTTCCTCTGCTTCTGTCTGCAGCAGGTTCACTTGCTGTATCAATAACGACTGCCAGCCCACGAGGATaGGACCAACATGTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: GFPLLLSAAGSLAVSITTASPRG*DQHVQS
Trigger: CGACTGAACATGTTGGTCCCATCCTCGTGGGCTGGC...AGTCGTTATTGATACAGCAAGTGAACCTGCTGCAGACAGAAGCAGAGGAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CCA 90 bp ATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCCACTCCGTCTTTCACGGGGATTaGCTGACGGTACAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: MQFDFKTVAFLFPPAAHSVFHGD*LTVQLV
Trigger: TACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGAC...GGAGTGGGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGCTCTGCTCCCGGTGGTaGGATTTAGGAACGATCCCT +
Preference number: 4 (lower is better)
Translates to: VPSVECKYCTGKMQACFPLCSRW*DLGTIP
Trigger: AGGGATCGTTCCTAAATCCCACCACCGGGAGCAGAG...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACACTCTGCTCCCGGTGGTaGGATTTAGGAACGATCCCT +
Preference number: 4 (lower is better)
Translates to: VECKYCTGKMQACFPKCTLCSRW*DLGTIP
Trigger: AGGGATCGTTCCTAAATCCCACCACCGGGAGCAGAG...TGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGGCTCTCTGCTCCCGGTaGTGGGATTTAGGAACGATC +
Preference number: 4 (lower is better)
Translates to: VPSVECKYCTGKMQACFPALCSR*WDLGTI
Trigger: GATCGTTCCTAAATCCCACCACCGGGAGCAGAGAGC...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp AGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACTCGGCCTCTCCAGGCTaGAAAACTCACCGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: SNLFEYLSIHPDTWEIQHSASPG*KTHRGG
Trigger: GCCGCCGCGGTGAGTTTTCCAGCCTGGAGAGGCCGA...GTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338458.8
CDS-3UTR CCA 90 bp GCTAGCGACGTGACTCGGGAAAGGGGTTTGACCCGTTTATTACTAGGCTCACTTTCCATAGACTCAGTATaGCAGGCTCAGGTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: ASDVTRERGLTRLLLGSLSIDSV*QAQVSS
Trigger: CGAGGAGACCTGAGCCTGCCATACTGAGTCTATGGA...AAGTGAGCCTAGTAATAAACGGGTCAAACCCCTTTCCCGAGTCACGTCGCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR CCA 90 bp GTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGGGCAGCACCACACCATaGGGCGCTCTGACCTCATCC +
Preference number: 4 (lower is better)
Translates to: VLLQTVPSVECKYCTGKMGSTTP*GALTSS
Trigger: GGATGAGGTCAGAGCGCCCCATGGTGTGGTGCTGCC...CATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496106.5
CDS-3UTR TCA 90 bp GTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGGTGCTCTGTTTCCGTTTGAGCGCTGCAGGGTTTaGCTGAAGCGCTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: VETAKANSIFILGALFPFERCRV*LKRFNG
Trigger: GCCATTAAAGCGCTTCAGTCAAACCCTGCAGCGCTC...AAACGGAAACAGAGCACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR TCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTTCTCTCATTGTTGCTaGATGCCCCTCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHAFSHCC*MPLAGS
Trigger: GCTCCCTGCGAGGGGCATTCAGCAACAATGAGAGAA...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CCTGCTGTTTCCACAGGAAGAGTCTGTCTGTTCCATGCGCTCACAGTCGAGGCTGCCACTGCTGTTTGTTaGAAGTGTCATTGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: PAVSTGRVCLFHALTVEAATAVC*KCHWLV
Trigger: TACAAGCCAATGACACTTTCAACAAACAGCAGTGGC...AGCCTCGACTGTGAGCGCATGGAACAGACAGACTCTTCCTGTGGAAACAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR GCA 90 bp TTACCTGCTTGTTTCACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCGGCGGCTGCCGGGCCTaGCCTTTGGGATGTCACCGC +
Preference number: 4 (lower is better)
Translates to: LPACFTEYHVRYSIDIAIGGCRA*PLGCHR
Trigger: GCGGTGACATCCCAAAGGGCAGGCCCGGCAGCCGCC...GATAGCAATATCTATCGAGTATCTAACATGATACTCGGTGAAACAAGCAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp ATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCCACTCCTCTCACTCCACAGCTTaGTATCTCTCCGTTTCGTGC +
Preference number: 4 (lower is better)
Translates to: MQFDFKTVAFLFPPAAHSSHSTA*YLSVSC
Trigger: GCACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGA...GGAGTGGGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp CTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGACTCATTGTTGCTGAATaGCCCTCGCAGGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: LHPSRHLGNTTQGNSCHRLIVAE*PSQGAT
Trigger: GGTGGCTCCCTGCGAGGGGCATTCAGCAACAATGAG...TCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACTCAAGCACCCCAGCTTaGCCGGCAGCACACAAAACT +
Preference number: 4 (lower is better)
Translates to: PLHPSRHLGNTTQGNSCHSSTPA*PAAHKT
Trigger: AGTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGA...GTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCAGAAGGGGTAATCCTTaGCCACCATGGCGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: HPSRHLGNTTQGNSCHRFRRGNP*PPWRLP
Trigger: CGGCAGCCGCCATGGTGGCCAAGGATTACCCCTTCT...GAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS-3UTR CCA 90 bp CATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTCTCTGCTCCCGGTGGTaGGATTTAGGAACGATCCCT +
Preference number: 4 (lower is better)
Translates to: HLWNANTVQVRCRPASRSLCSRW*DLGTIP
Trigger: AGGGATCGTTCCTAAATCCCACCACCGGGAGCAGAG...ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTGCTCTCTGCTCCCGGTaGTGGGATTTAGGAACGATC +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHAALCSR*WDLGTI
Trigger: GATCGTTCCTAAATCCCACCACCGGGAGCAGAGAGC...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGGAGCGCTGCAGGGTTTaGCTGAAGCGCTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: TTQGNSCHRFQLTQTDWQERCRV*LKRFNG
Trigger: GCCATTAAAGCGCTTCAGTCAAACCCTGCAGCGCTC...CTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCTCTCATTGTTGCTaGATGCCCCTCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LHPSRHLGNTTQGNSCHRFSHCC*MPLAGS
Trigger: GCTCCCTGCGAGGGGCATTCAGCAACAATGAGAGAA...TCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATAGCTCACAGTCGAGGCTaGCCTCACTCGTGTCCATAC +
Preference number: 4 (lower is better)
Translates to: VTVLGTKVQIRETGPTCIAHSRG*PHSCPY
Trigger: GTATGGACACGAGTGAGGTCAGCCTCGACTGTGAGC...TATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTAGCTCACAGTCGAGGCTaGCCTCACTCGTGTCCATAC +
Preference number: 4 (lower is better)
Translates to: TQGNSCHRFQLTQTDWQLAHSRG*PHSCPY
Trigger: GTATGGACACGAGTGAGGTCAGCCTCGACTGTGAGC...TAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCTCACAGTCGAGGCTaGCCTCACTCGTGTCCATAC +
Preference number: 4 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQAHSRG*PHSCPY
Trigger: GTATGGACACGAGTGAGGTCAGCCTCGACTGTGAGC...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGCTCACAGTCGAGGCTaGCCTCACTCGTGTCCATAC +
Preference number: 4 (lower is better)
Translates to: DSSLHRQIGSYSTRDKGTAHSRG*PHSCPY
Trigger: GTATGGACACGAGTGAGGTCAGCCTCGACTGTGAGC...TGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGCTAGCAACCAACTATaGGAGACACCTCCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATASNQL*ETPPGA
Trigger: GGCACCAGGAGGTGTCTCTCATAGTTGGTTGCTAGC...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTTATCTCTCCGTTTCGTaGTCGAGGGGGCGGCATTTC +
Preference number: 4 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLAYLSVS*SRGRHF
Trigger: GAAATGCCGCCCCCTCGAGCACGAAACGGAGAGATA...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCTCTCACTCCACAGCTTaGTATCTCTCCGTTTCGTGC +
Preference number: 4 (lower is better)
Translates to: SVECKYCTGKMQACFPKCSHSTA*YLSVSC
Trigger: GCACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGA...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp TTTCCACCAGCTGCCCACTCCCTCCAAACTACCACGGCCAAAAACATTCAACAGCGGCTACTTGATTGCTaGAGTAGCTATCATAGGAGC +
Preference number: 4 (lower is better)
Translates to: FPPAAHSLQTTTAKNIQQRLLDC*SSYHRS
Trigger: GCTCCTATGATAGCTACTGCAGCAATCAAGTAGCCG...CTGTTGAATGTTTTTGGCCGTGGTAGTTTGGAGGGAGTGGGCAGCTGGTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp ATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGCTCATTGTTGCTGAATaGCCCTCGCAGGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: IPAYTDRLAVTVLGTKVQLIVAE*PSQGAT
Trigger: GGTGGCTCCCTGCGAGGGGCATTCAGCAACAATGAG...CTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACTCATTGTTGCTGAATaGCCCTCGCAGGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: TQGNSCHRFQLTQTDWQLLIVAE*PSQGAT
Trigger: GGTGGCTCCCTGCGAGGGGCATTCAGCAACAATGAG...TAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCCTCATTGTTGCTGAATaGCCCTCGCAGGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: IHPDTWEIQHRVIVATDSLIVAE*PSQGAT
Trigger: GGTGGCTCCCTGCGAGGGGCATTCAGCAACAATGAG...GGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTTCAAGCACCCCAGCTTaGCCGGCAGCACACAAAACT +
Preference number: 4 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLASSTPA*PAAHKT
Trigger: AGTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGA...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTCTCCCTGTAGCTCTCTaGTCCCGGTGGTGGGATTTA +
Preference number: 4 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLALPVAL*SRWWDL
Trigger: TAAATCCCACCACCGGGAGCAGAGAGCTACAGGGAG...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp ACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGGGTAAGATGCAGGCCTaGTTCCCGAAGTGCACATGC +
Preference number: 4 (lower is better)
Translates to: TTQGNSCHRFQLTQTDWQGKMQA*FPKCTC
Trigger: GCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACC...CTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACAACTGTACAGGTAAGATaGAGGCCTGCTTCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: VECKYCTGKMQACFPKCTTVQVR*RPASRS
Trigger: ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGT...TGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCGAAGGCACTGGACCATaGTTTTCTCTCAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: SVECKYCTGKMQACFPKCEGTGP*FSLNGS
Trigger: GGAGCCATTGAGAGAAAAGCATGGTCCAGTGCCTTC...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTGCAGTGGAGCCCTGTaGACAGGATTCTCTGAACAG +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHACSGAL*TGFSEQ
Trigger: CTGTTCAGAGAATCCTGTGCACAGGGCTCCACTGCA...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496106.5
CDS-3UTR GCA 90 bp TACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTCACCGGCTCCTAACTaGAGTGGAGCCCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: YSTRDKGTDTRDWANMYTSPAPN*SGALCT
Trigger: TGTGCACAGGGCTCCACTGCAGTTAGGAGCCGGTGA...AGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496106.5
CDS-3UTR CCA 90 bp GTTAAAGATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCAAGTCTTCTTCTCCTTaGGAAAGCTCAAAGATCGCC +
Preference number: 4 (lower is better)
Translates to: VKDSELAAASVLALLRSAKSSSP*ESSKIA
Trigger: GGCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTT...GGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATCTTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp GATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCTCTATTTGGAGAGTTTCAGCATaGGGTCATGATAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: DSELAAASVLALLRSASIWRVSA*GHDRPF
Trigger: AAAAGGCCTATCATGACCCCATGCTGAAACTCTCCA...AATAGAGGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGGCCAGCCCACGAGGATaGGACCAACATGTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: IPAYTDRLAVTVLGTKVQASPRG*DQHVQS
Trigger: CGACTGAACATGTTGGTCCCATCCTCGTGGGCTGGC...CTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTGGTCCAGCAGAGCTTTaGCGGCTACTTGATTGCTGC +
Preference number: 4 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLAGPAEL*RLLDCC
Trigger: GCAGCAATCAAGTAGCCGCCAAAGCTCTGCTGGACC...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACCAAAGCTGCTCATTGTaGGTGACGGCTCGAGTGATC +
Preference number: 4 (lower is better)
Translates to: PLHPSRHLGNTTQGNSCHQSCSL*VTARVI
Trigger: GATCACTCGAGCCGTCACCCACAATGAGCAGCTTTG...GTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CAGATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTGGCAGGCCTTCCTAGCTCTCTGCTCCCGGTaGTGGGATTTAGGAACGATC +
Preference number: 4 (lower is better)
Translates to: QMKHNEYRAFLLSWQAFLALCSR*WDLGTI
Trigger: GATCGTTCCTAAATCCCACCACCGGGAGCAGAGAGC...TAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACGCTCTCTGCTCCCGGTaGTGGGATTTAGGAACGATC +
Preference number: 4 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYALCSR*WDLGTI
Trigger: GATCGTTCCTAAATCCCACCACCGGGAGCAGAGAGC...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCCTTCTTGTTATCCTaGCAGGCCTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: HLWNANTVQVRCRPASRSAFLLS*QAFLSP
Trigger: AGGGCTTAGGAAGGCCTGCCAGGATAACAAGAAGGC...ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp GTTAAAGATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCATGCTTTTCTCTCAATaGCTCCCACAGAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VKDSELAAASVLALLRSAMLFSQ*LPQKVL
Trigger: CAGAACCTTCTGTGGGAGCCATTGAGAGAAAAGCAT...GGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATCTTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACTCCATAGACTCAGTATaGCAGGCTCAGGTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PLHPSRHLGNTTQGNSCHSIDSV*QAQVSS
Trigger: CGAGGAGACCTGAGCCTGCCATACTGAGTCTATGGA...GTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338458.8
3UTR CAA 72 bp ATTGTGGGTGACGGCTCGAGTGATCACAAGCACTTCTaGGAACAGGAAAACATGCAGTTTCACGCCCCGATT +
Preference number: 4 (lower is better)
Translates to: IVGDGSSDHKHF*EQENMQFHAPI
Trigger: AATCGGGGCGTGAAACTGCATGTTTTCCTGTTCCAAGAAGTGCTTGTGATCACTCGAGCCGTCACCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR TCA 90 bp TACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTGCTGCAGGGTTTGACTaGAGCGCTTTAATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: YSTRDKGTDTRDWANMYTAAGFD*SALMAW
Trigger: CCACGCCATTAAAGCGCTTCAGTCAAACCCTGCAGC...AGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCGCTGCAGGGTTTGACTaGAGCGCTTTAATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: IHPDTWEIQHRVIVATDSAAGFD*SALMAW
Trigger: CCACGCCATTAAAGCGCTTCAGTCAAACCCTGCAGC...GGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GGAAACATGGGAAAGTTGTTTTGCCGCTGCCGTTTAGGCATGAATTCTCAGTTTGCTGCAGGGTTTGACTaGAGCGCTTTAATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GNMGKLFCRCRLGMNSQFAAGFD*SALMAW
Trigger: CCACGCCATTAAAGCGCTTCAGTCAAACCCTGCAGC...AAACTGAGAATTCATGCCTAAACGGCAGCGGCAAAACAACTTTCCCATGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR TCA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCGAGCGCTGCAGGGTTTaGCTGAAGCGCTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGERCRV*LKRFNG
Trigger: GCCATTAAAGCGCTTCAGTCAAACCCTGCAGCGCTC...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGGAGCGCTGCAGGGTTTaGCTGAAGCGCTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: VLLQTVPSVECKYCTGKMERCRV*LKRFNG
Trigger: GCCATTAAAGCGCTTCAGTCAAACCCTGCAGCGCTC...CATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCTTCTCTCATTGTTGCTaGATGCCCCTCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGFSHCC*MPLAGS
Trigger: GCTCCCTGCGAGGGGCATTCAGCAACAATGAGAGAA...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACATTCTCTCATTGTTGCTaGATGCCCCTCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: DSSLHRQIGSYSTRDKGTFSHCC*MPLAGS
Trigger: GCTCCCTGCGAGGGGCATTCAGCAACAATGAGAGAA...TGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp TGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGTCCATACTACAGTCTaGCTCACTGTCCGATTGGTC +
Preference number: 4 (lower is better)
Translates to: WNANTVQVRCRPASRSAHVHTTV*LTVRLV
Trigger: GACCAATCGGACAGTGAGTCAGACTGTAGTATGGAC...ATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp AGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACGCTCACAGTCGAGGCTaGCCTCACTCGTGTCCATAC +
Preference number: 4 (lower is better)
Translates to: SNLFEYLSIHPDTWEIQHAHSRG*PHSCPY
Trigger: GTATGGACACGAGTGAGGTCAGCCTCGACTGTGAGC...GTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR TCA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGGCTAGCAACCAACTATaGGAGACACCTCCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTASNQL*ETPPGA
Trigger: GGCACCAGGAGGTGTCTCTCATAGTTGGTTGCTAGC...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp AGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCGCTAGCAACCAACTATaGGAGACACCTCCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: STRDKGTDTRDWANMYTFASNQL*ETPPGA
Trigger: GGCACCAGGAGGTGTCTCTCATAGTTGGTTGCTAGC...GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp ACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAGCTAGCAACCAACTATaGGAGACACCTCCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TRDKGTDTRDWANMYTFTASNQL*ETPPGA
Trigger: GGCACCAGGAGGTGTCTCTCATAGTTGGTTGCTAGC...TGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCTCCCACAGAAGGTTCTaGCGAAGTGCTTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: SVECKYCTGKMQACFPKCSHRRF*RSAFHS
Trigger: GGAATGAAAAGCACTTCGTCAGAACCTTCTGTGGGA...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGGCTTCTAAAAGTGGCTaGTGGCGCCTACAAAGAATC +
Preference number: 4 (lower is better)
Translates to: VPSVECKYCTGKMQACFPASKSG*WRLQRI
Trigger: GATTCTTTGTAGGCGCCATCAGCCACTTTTAGAAGC...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp GTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACACTTAGCGTGCTAAGCTaGACAGACAGCAGAAAACTC +
Preference number: 4 (lower is better)
Translates to: VECKYCTGKMQACFPKCTLSVLS*TDSRKL
Trigger: GAGTTTTCTGCTGTCTGTTCAGCTTAGCACGCTAAG...TGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCTATCTCTCCGTTTCGTaGTCGAGGGGGCGGCATTTC +
Preference number: 4 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGYLSVS*SRGRHF
Trigger: GAAATGCCGCCCCCTCGAGCACGAAACGGAGAGATA...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTCTTGGCGGCTACTTGATTaGTGCAGTAGCTATCATAGG +
Preference number: 4 (lower is better)
Translates to: ANTVQVRCRPASRSAHASWRLLD*CSSYHR
Trigger: CCTATGATAGCTACTGCAGCAATCAAGTAGCCGCCA...AGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGGAACAGGAAAACATaGAGTTTCACGCCCCGATTG +
Preference number: 4 (lower is better)
Translates to: VECKYCTGKMQACFPKCTWNRKT*SFTPRL
Trigger: CAATCGGGGCGTGAAACTGCATGTTTTCCTGTTCCA...TGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTCAAGCACCCCAGCTTaGCCGGCAGCACACAAAACT +
Preference number: 4 (lower is better)
Translates to: GNSCHRFQLTQTDWQLQYSSTPA*PAAHKT
Trigger: AGTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGA...GTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGTCAAGCACCCCAGCTTaGCCGGCAGCACACAAAACT +
Preference number: 4 (lower is better)
Translates to: IPAYTDRLAVTVLGTKVQSSTPA*PAAHKT
Trigger: AGTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGA...CTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACTCCCTGTAGCTCTCTaGTCCCGGTGGTGGGATTTA +
Preference number: 4 (lower is better)
Translates to: PDTWEIQHRVIVATDSSLLPVAL*SRWWDL
Trigger: TAAATCCCACCACCGGGAGCAGAGAGCTACAGGGAG...TAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACGCCTGCTTCCCGAAGTaGACATGCTTCTGTCAGACG +
Preference number: 4 (lower is better)
Translates to: GNSCHRFQLTQTDWQLQYACFPK*TCFCQT
Trigger: CGTCTGACAGAAGCATGTGCACTTCGGGAAGCAGGC...GTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGGCCTGCTTCCCGAAGTaGACATGCTTCTGTCAGACG +
Preference number: 4 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTACFPK*TCFCQT
Trigger: CGTCTGACAGAAGCATGTGCACTTCGGGAAGCAGGC...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATAGGTAAGATGCAGGCCTaGTTCCCGAAGTGCACATGC +
Preference number: 4 (lower is better)
Translates to: VTVLGTKVQIRETGPTCIGKMQA*FPKCTC
Trigger: GCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACC...TATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAAGGTAAGATGCAGGCCTaGTTCCCGAAGTGCACATGC +
Preference number: 4 (lower is better)
Translates to: LGTKVQIRETGPTCILSQGKMQA*FPKCTC
Trigger: GCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACC...TTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCGGTAAGATGCAGGCCTaGTTCCCGAAGTGCACATGC +
Preference number: 4 (lower is better)
Translates to: IHPDTWEIQHRVIVATDSGKMQA*FPKCTC
Trigger: GCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACC...GGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGAGAATGCAACCAGGCTaGTGGGTACCTCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TTQGNSCHRFQLTQTDWQRMQPG*WVPLQL
Trigger: AAGCTGGAGAGGTACCCAGCAGCCTGGTTGCATTCT...CTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR CCA 90 bp TTACCTGCTTGTTTCACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCGCCGGGCCTGCCCTTTaGGATGTCACCGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: LPACFTEYHVRYSIDIAIAGPAL*DVTADP
Trigger: AGGGTCAGCGGTGACATCCCAAAGGGCAGGCCCGGC...GATAGCAATATCTATCGAGTATCTAACATGATACTCGGTGAAACAAGCAGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp AAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGAGCCAGCCCACGAGGATaGGACCAACATGTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: KCFSKPFHLWNANTVQVRASPRG*DQHVQS
Trigger: CGACTGAACATGTTGGTCCCATCCTCGTGGGCTGGC...TCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp ATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCGGTCCAGCAGAGCTTTaGCGGCTACTTGATTGCTGC +
Preference number: 4 (lower is better)
Translates to: IHPDTWEIQHRVIVATDSGPAEL*RLLDCC
Trigger: GCAGCAATCAAGTAGCCGCCAAAGCTCTGCTGGACC...GGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp TTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAGGTCCAGCAGAGCTTTaGCGGCTACTTGATTGCTGC +
Preference number: 4 (lower is better)
Translates to: LFEYLSIHPDTWEIQHRVGPAEL*RLLDCC
Trigger: GCAGCAATCAAGTAGCCGCCAAAGCTCTGCTGGACC...TACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CCA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCCAAAGCTGCTCATTGTaGGTGACGGCTCGAGTGATC +
Preference number: 4 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSQSCSL*VTARVI
Trigger: GATCACTCGAGCCGTCACCCACAATGAGCAGCTTTG...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGTCTTTCACGGGGATTaGCTGACGGTACAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATVFHGD*LTVQLV
Trigger: TACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGAC...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp TACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTCTCTGCTCCCGGTGGTaGGATTTAGGAACGATCCCT +
Preference number: 4 (lower is better)
Translates to: YSTRDKGTDTRDWANMYTLCSRW*DLGTIP
Trigger: AGGGATCGTTCCTAAATCCCACCACCGGGAGCAGAG...AGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAACTCTGCTCCCGGTGGTaGGATTTAGGAACGATCCCT +
Preference number: 4 (lower is better)
Translates to: LGTKVQIRETGPTCILSQLCSRW*DLGTIP
Trigger: AGGGATCGTTCCTAAATCCCACCACCGGGAGCAGAG...TTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp TACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTGCTCTCTGCTCCCGGTaGTGGGATTTAGGAACGATC +
Preference number: 4 (lower is better)
Translates to: YSTRDKGTDTRDWANMYTALCSR*WDLGTI
Trigger: GATCGTTCCTAAATCCCACCACCGGGAGCAGAGAGC...AGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCGCTCTCTGCTCCCGGTaGTGGGATTTAGGAACGATC +
Preference number: 4 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGALCSR*WDLGTI
Trigger: GATCGTTCCTAAATCCCACCACCGGGAGCAGAGAGC...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CCTGCTGTTTCCACAGGAAGAGTCTGTCTGTTCCATGCGCTCACAGTCGAGGCTAAACCGTTCCATCTGTaGAATGCAAATACTGTACAG +
Preference number: 4 (lower is better)
Translates to: PAVSTGRVCLFHALTVEAKPFHL*NANTVQ
Trigger: CTGTACAGTATTTGCATTCCACAGATGGAACGGTTT...AGCCTCGACTGTGAGCGCATGGAACAGACAGACTCTTCCTGTGGAAACAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR CCA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACATGCAACCAGGCTGCTaGGTACCTCTCCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYMQPGC*VPLQLL
Trigger: AAGAAGCTGGAGAGGTACCCAGCAGCCTGGTTGCAT...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
3UTR CAA 72 bp ATGAGGTTTGCTAGCGACGTGACTCGGGAAAGGGGTTaGACCCGTTTATTACTAGGCTCACTTATGTCGAGA +
Preference number: 4 (lower is better)
Translates to: MRFASDVTRERG*TRLLLGSLMSR
Trigger: TCTCGACATAAGTGAGCCTAGTAATAAACGGGTCAAACCCCTTTCCCGAGTCACGTCGCTAGCAAACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR TCA 90 bp AAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGAGAGCGCTGCAGGGTTTaGCTGAAGCGCTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: KCFSKPFHLWNANTVQVRERCRV*LKRFNG
Trigger: GCCATTAAAGCGCTTCAGTCAAACCCTGCAGCGCTC...TCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGAGAGCGCTGCAGGGTTTaGCTGAAGCGCTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: TWEIQHRVIVATDSSLHRERCRV*LKRFNG
Trigger: GCCATTAAAGCGCTTCAGTCAAACCCTGCAGCGCTC...TCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATTGGATGTAAGCATCTaGTTGACGCACACATCGAAG +
Preference number: 4 (lower is better)
Translates to: VECKYCTGKMQACFPKCTLDVSI*LTHTSK
Trigger: CTTCGATGTGTGCGTCAATCAGATGCTTACATCCAA...TGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTAAATCCTGGACTCGGTaGTCTTGCTTTTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHAKSWTR*SCFLWS
Trigger: GGACCACAAAAAGCAAGATCACCGAGTCCAGGATTT...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTCACCAGTCTTGGTGTTaGTTTCTGCCACAATTCCCT +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHAHQSWC*FLPQFP
Trigger: AGGGAATTGTGGCAGAAATCAACACCAAGACTGGTG...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGATTCTCTCATTGTTGCTaGATGCCCCTCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TWEIQHRVIVATDSSLHRFSHCC*MPLAGS
Trigger: GCTCCCTGCGAGGGGCATTCAGCAACAATGAGAGAA...TCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGTCCATACTACAGTCTaGCTCACTGTCCGATTGGTC +
Preference number: 4 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATVHTTV*LTVRLV
Trigger: GACCAATCGGACAGTGAGTCAGACTGTAGTATGGAC...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCGTCCATACTACAGTCTaGCTCACTGTCCGATTGGTC +
Preference number: 4 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSVHTTV*LTVRLV
Trigger: GACCAATCGGACAGTGAGTCAGACTGTAGTATGGAC...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGACCAGAGATGGCAAATTaGCGACCCAAAAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LHPSRHLGNTTQGNSCHRPEMAN*RPKSRA
Trigger: TGCTCTGCTTTTGGGTCGTCAATTTGCCATCTCTGG...TCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp CATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCTTCTAAAAGTGGCTaGTGGCGCCTACAAAGAATC +
Preference number: 4 (lower is better)
Translates to: HLWNANTVQVRCRPASRSASKSG*WRLQRI
Trigger: GATTCTTTGTAGGCGCCATCAGCCACTTTTAGAAGC...ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTTCCCAACACACTGGCTaGTGGCTTCTAAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLASQHTG*WLLKVA
Trigger: AGCCACTTTTAGAAGCCATCAGCCAGTGTGTTGGGA...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp ACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCTCTACAGCTGCATTaGTTCATTGCTGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: TVPSVECKYCTGKMQACFPLQLH*FIAVEL
Trigger: CAGTTCCACAGCAATGAATCAATGCAGCTGTAGAGG...GAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338458.8
CDS-3UTR TCA 90 bp ACTAGGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGGTTGTTTTCTTCTGGGGTaGTCCCTGGAAGAACCCTCT +
Preference number: 4 (lower is better)
Translates to: TRLTYVETAKANSIFILGCFLLG*SLEEPS
Trigger: AGAGGGTTCTTCCAGGGATCACCCCAGAAGAAAACA...ACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486829.1
CDS-3UTR TCA 90 bp TTTCCACCAGCTGCCCACTCCCTCCAAACTACCACGGCCAAAAACATTCAACAGCATACAAATGCAGTTTaGCTTCAAGACCGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: FPPAAHSLQTTTAKNIQQHTNAV*LQDRGF
Trigger: AAAGCCACGGTCTTGAAGTCAAACTGCATTTGTATG...CTGTTGAATGTTTTTGGCCGTGGTAGTTTGGAGGGAGTGGGCAGCTGGTGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp CATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTTGGCGGCTACTTGATTaGTGCAGTAGCTATCATAGG +
Preference number: 4 (lower is better)
Translates to: HLWNANTVQVRCRPASRSWRLLD*CSSYHR
Trigger: CCTATGATAGCTACTGCAGCAATCAAGTAGCCGCCA...ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTGGCGGCTACTTGATTaGTGCAGTAGCTATCATAGG +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHAWRLLD*CSSYHR
Trigger: CCTATGATAGCTACTGCAGCAATCAAGTAGCCGCCA...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp TGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATTGGAACAGGAAAACATaGAGTTTCACGCCCCGATTG +
Preference number: 4 (lower is better)
Translates to: WNANTVQVRCRPASRSAHWNRKT*SFTPRL
Trigger: CAATCGGGGCGTGAAACTGCATGTTTTCCTGTTCCA...ATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTCAAGCACCCCAGCTTaGCCGGCAGCACACAAAACT +
Preference number: 4 (lower is better)
Translates to: GNTTQGNSCHRFQLTQTDSSTPA*PAAHKT
Trigger: AGTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGA...ATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACTCAAGCACCCCAGCTTaGCCGGCAGCACACAAAACT +
Preference number: 4 (lower is better)
Translates to: LKVTCLSTSPSIQTLGKYSSTPA*PAAHKT
Trigger: AGTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGA...GTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR GCA 90 bp CAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAACTCCCTGTAGCTCTCTaGTCCCGGTGGTGGGATTTA +
Preference number: 4 (lower is better)
Translates to: QLKVTCLSTSPSIQTLGKLPVAL*SRWWDL
Trigger: TAAATCCCACCACCGGGAGCAGAGAGCTACAGGGAG...TTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR GCA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGTCCGATTGGTCCATCTaGTCAAGTTTTGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VPSVECKYCTGKMQACFPSDWSI*SSFVSP
Trigger: GGGAGAAACAAAACTTGAGCAGATGGACCAATCGGA...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GGCTTTCCTCTGCTTCTGTCTGCAGCAGGTTCACTTGCTGTATCAATAACGACTTACTTTCACCGTGCCTaGTGTTTCCACAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: GFPLLLSAAGSLAVSITTYFHRA*CFHRKS
Trigger: ACTCTTCCTGTGGAAACAGCAGGCACGGTGAAAGTA...AGTCGTTATTGATACAGCAAGTGAACCTGCTGCAGACAGAAGCAGAGGAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR GCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTACGTTACTTTCACCGTaGCTGCTGTTTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHATLLSP*LLFPQE
Trigger: TTCCTGTGGAAACAGCAGGCACGGTGAAAGTAACGT...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACGCCTGCTTCCCGAAGTaGACATGCTTCTGTCAGACG +
Preference number: 4 (lower is better)
Translates to: SNLFEYLSIHPDTWEIQHACFPK*TCFCQT
Trigger: CGTCTGACAGAAGCATGTGCACTTCGGGAAGCAGGC...GTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR GCA 90 bp AAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGAGGTAAGATGCAGGCCTaGTTCCCGAAGTGCACATGC +
Preference number: 4 (lower is better)
Translates to: KCFSKPFHLWNANTVQVRGKMQA*FPKCTC
Trigger: GCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACC...TCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGACTGTACAGGTAAGATaGAGGCCTGCTTCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: TTQGNSCHRFQLTQTDWQTVQVR*RPASRS
Trigger: ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGT...CTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp TGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATCAGATGAGTTCCTCATaGCCTATTTACAAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: WNANTVQVRCRPASRSAHQMSSS*PIYKAV
Trigger: GACGGCCTTGTAAATAGGGCATGAGGAACTCATCTG...ATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACGAAGGCACTGGACCATaGTTTTCTCTCAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYEGTGP*FSLNGS
Trigger: GGAGCCATTGAGAGAAAAGCATGGTCCAGTGCCTTC...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp ATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGTTCCAAGACGGAGAATaGAACCAGGCTGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: IPAYTDRLAVTVLGTKVQFQDGE*NQAAGY
Trigger: GTACCCAGCAGCCTGGTTGCATTCTCCGTCTTGGAA...CTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp ACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTATTCCAAGACGGAGAATaGAACCAGGCTGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: TQGNSCHRFQLTQTDWQLFQDGE*NQAAGY
Trigger: GTACCCAGCAGCCTGGTTGCATTCTCCGTCTTGGAA...TAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp GTGACTCGGGAAAGGGGTTTGACCCGTTTATTACTAGGCTCACTTATGTCGAGAATGGGAAAGTTGTTTTaGCGCTGCCGTTTAGGCATG +
Preference number: 4 (lower is better)
Translates to: VTRERGLTRLLLGSLMSRMGKLF*RCRLGM
Trigger: CATGCCTAAACGGCAGCGGCAAAACAACTTTCCCAT...TCTCGACATAAGTGAGCCTAGTAATAAACGGGTCAAACCCCTTTCCCGAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR GCA 90 bp ATACAAATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCTCTCCTCCATCACAATaGAAGCTCCATAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: IQMQFDFKTVAFLFPPAASPPSQ*KLHRGR
Trigger: CCTTCCCCTATGGAGCTTGCATTGTGATGGAGGAGA...GGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGTGGAGAGTTTCAGCATaGGGTCATGATAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: VPSVECKYCTGKMQACFPWRVSA*GHDRPF
Trigger: AAAAGGCCTATCATGACCCCATGCTGAAACTCTCCA...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp ATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCCACTCCCTTGTTCTGTCATTATaGAGAGTTTCAGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: MQFDFKTVAFLFPPAAHSLVLSL*RVSAWG
Trigger: ACCCCATGCTGAAACTCTCCATAATGACAGAACAAG...GGAGTGGGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp ACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATAGCCAGCCCACGAGGATaGGACCAACATGTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: TESNLFEYLSIHPDTWEIASPRG*DQHVQS
Trigger: CGACTGAACATGTTGGTCCCATCCTCGTGGGCTGGC...TATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000496106.5
CDS-3UTR CCA 90 bp TTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGGTCCAGCAGAGCTTTaGCGGCTACTTGATTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGNTTQGNSCHRFQLTQTGPAEL*RLLDCC
Trigger: GCAGCAATCAAGTAGCCGCCAAAGCTCTGCTGGACC...TGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATGGTCCAGCAGAGCTTTaGCGGCTACTTGATTGCTGC +
Preference number: 4 (lower is better)
Translates to: GNTTQGNSCHRFQLTQTDGPAEL*RLLDCC
Trigger: GCAGCAATCAAGTAGCCGCCAAAGCTCTGCTGGACC...ATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCTACCAGGCGGCTTCTTaGAATATCGAGGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: SVECKYCTGKMQACFPKCYQAAS*NIEEIP
Trigger: TGGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTA...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTACCAGGCGGCTTCTTaGAATATCGAGGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: PSVECKYCTGKMQACFPKYQAAS*NIEEIP
Trigger: TGGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTA...CTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACCAAAGCTGCTCATTGTaGGTGACGGCTCGAGTGATC +
Preference number: 4 (lower is better)
Translates to: GNSCHRFQLTQTDWQLQYQSCSL*VTARVI
Trigger: GATCACTCGAGCCGTCACCCACAATGAGCAGCTTTG...GTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAAAGCTGCTCATTGTaGGTGACGGCTCGAGTGATC +
Preference number: 4 (lower is better)
Translates to: HPSRHLGNTTQGNSCHRFQSCSL*VTARVI
Trigger: GATCACTCGAGCCGTCACCCACAATGAGCAGCTTTG...GAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGGTCTTTCACGGGGATTaGCTGACGGTACAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: VLLQTVPSVECKYCTGKMVFHGD*LTVQLV
Trigger: TACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGAC...CATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CTCTCCTGTGTTTCTATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTCTCTGCTCCCGGTGGTaGGATTTAGGAACGATCCCT +
Preference number: 4 (lower is better)
Translates to: LSCVSINSVIDRVMVSLPLCSRW*DLGTIP
Trigger: AGGGATCGTTCCTAAATCCCACCACCGGGAGCAGAG...AGGAAGAGAGACCATGACTCTATCGATGACACTGTTTATAGAAACACAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCGACTCACTGTCCGATTaGTCCATCTGCTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SVECKYCTGKMQACFPKCDSLSD*SICSSF
Trigger: AAAACTTGAGCAGATGGACCAATCGGACAGTGAGTC...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp TCACAGTCGAGGCTGACCTCACTCGTGTCCATACTACAGTCTGACTCACTGTCCGTTCACTTCATGAGTTaGTCTTTCCTGATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SQSRLTSLVSILQSDSLSVHFMS*SFLILS
Trigger: AGAGAGAATCAGGAAAGACCAACTCATGAAGTGAAC...GGACAGTGAGTCAGACTGTAGTATGGACACGAGTGAGGTCAGCCTCGACTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR CCA 90 bp GTTAAAGATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCGCATCAAACTTGCACTaGATGAAGTTGCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: VKDSELAAASVLALLRSAASNLH*MKLQSS
Trigger: TGAACTTTGCAACTTCATCCAGTGCAAGTTTGATGC...GGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATCTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp TTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAGCCTTCTTGTTATCCTaGCAGGCCTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LFEYLSIHPDTWEIQHRVAFLLS*QAFLSP
Trigger: AGGGCTTAGGAAGGCCTGCCAGGATAACAAGAAGGC...TACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTTCTTGTTATCCTaGCAGGCCTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQAFLLS*QAFLSP
Trigger: AGGGCTTAGGAAGGCCTGCCAGGATAACAAGAAGGC...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp GCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTCTGCACAGAACCAGAGATaGCAAATTGACGACCCAAAA +
Preference number: 4 (lower is better)
Translates to: ANTVQVRCRPASRSAHASAQNQR*QIDDPK
Trigger: TTTTGGGTCGTCAATTTGCCATCTCTGGTTCTGTGC...AGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CCA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGATGCAACCAGGCTGCTaGGTACCTCTCCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTMQPGC*VPLQLL
Trigger: AAGAAGCTGGAGAGGTACCCAGCAGCCTGGTTGCAT...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR TCA 90 bp GGCTTTCCTCTGCTTCTGTCTGCAGCAGGTTCACTTGCTGTATCAATAACGACTTCAAAGATCGCCTCCTaGCGTTTGATTTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GFPLLLSAAGSLAVSITTSKIAS*RLISLD
Trigger: ATCCAAGGAAATCAAACGTCAGGAGGCGATCTTTGA...AGTCGTTATTGATACAGCAAGTGAACCTGCTGCAGACAGAAGCAGAGGAAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp GCAGTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTTCAAAGATCGCCTCCTaGCGTTTGATTTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: AVTVLGTKVQIRETGPTCSKIAS*RLISLD
Trigger: ATCCAAGGAAATCAAACGTCAGGAGGCGATCTTTGA...ACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTTCAAAGATCGCCTCCTaGCGTTTGATTTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: HLWNANTVQVRCRPASRSSKIAS*RLISLD
Trigger: ATCCAAGGAAATCAAACGTCAGGAGGCGATCTTTGA...ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTCTAACATCTCGAAGCTaGCTAAGGAGCTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: HLWNANTVQVRCRPASRSLTSRS*LRSSSC
Trigger: ACATGAAGAGCTCCTTAGTCAGCTTCGAGATGTTAG...ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ATACAAATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCAAATCCTGGACTCGGTaGTCTTGCTTTTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: IQMQFDFKTVAFLFPPAAKSWTR*SCFLWS
Trigger: GGACCACAAAAAGCAAGATCACCGAGTCCAGGATTT...GGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR TCA 90 bp CAGATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTGGCAGGCCTTCCTATGTAGCGAGTGGGTCTaGCTTTGGGATCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: QMKHNEYRAFLLSWQAFLCSEWV*LWDPFL
Trigger: CAAAAATGGATCCCAAAGTCAGACCCACTCGCTACA...TAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACTGTAGCGAGTGGGTCTaGCTTTGGGATCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYCSEWV*LWDPFL
Trigger: CAAAAATGGATCCCAAAGTCAGACCCACTCGCTACA...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CTTGTTATCCTGGCAGGCCTTCCTAAGCCCTTTGGGTTCTATTCTGATGTTTTAGTCCATACTACAGTCTaGCTCACTGTCCGATTGGTC +
Preference number: 4 (lower is better)
Translates to: LVILAGLPKPFGFYSDVLVHTTV*LTVRLV
Trigger: GACCAATCGGACAGTGAGTCAGACTGTAGTATGGAC...TAAAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGCCTGCCAGGATAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp CCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGATCCCAATACACAGATaGGTTCCTCATGCCCTATTT +
Preference number: 4 (lower is better)
Translates to: PSVECKYCTGKMQACFPKIPIHR*VPHALF
Trigger: AAATAGGGCATGAGGAACTCATCTGTGTATTGGGAT...CTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp GACTCGGTGATCTTGCTTTTTGTGGTCCAGCAGAGCTTTGGCGGCTACTTGATTGCAGATGAAACACAATaGATACAGGGCCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: DSVILLFVVQQSFGGYLIADETQ*IQGLLV
Trigger: AACAAGAAGGCCCTGTATTCATTGTGTTTCATCTGC...AATCAAGTAGCCGCCAAAGCTCTGCTGGACCACAAAAAGCAAGATCACCGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR TCA 90 bp ACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACACCAGAGATGGCAAATTaGCGACCCAAAAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TRDKGTDTRDWANMYTFTPEMAN*RPKSRA
Trigger: TGCTCTGCTTTTGGGTCGTCAATTTGCCATCTCTGG...TGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp CAGATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTGGCAGGCCTTCCTAGCTTCTAAAAGTGGCTaGTGGCGCCTACAAAGAATC +
Preference number: 4 (lower is better)
Translates to: QMKHNEYRAFLLSWQAFLASKSG*WRLQRI
Trigger: GATTCTTTGTAGGCGCCATCAGCCACTTTTAGAAGC...TAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp ACTAGGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGGTCCTCTACAGCTGCATTaGTTCATTGCTGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: TRLTYVETAKANSIFILGPLQLH*FIAVEL
Trigger: CAGTTCCACAGCAATGAATCAATGCAGCTGTAGAGG...ACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR TCA 90 bp ACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGCTTAGCGTGCTAAGCTaGACAGACAGCAGAAAACTC +
Preference number: 4 (lower is better)
Translates to: TTQGNSCHRFQLTQTDWQLSVLS*TDSRKL
Trigger: GAGTTTTCTGCTGTCTGTTCAGCTTAGCACGCTAAG...CTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR TCA 90 bp ATCTTCATCTTGGGTGCTCTGTTTCCGTTTTCGCTGCTGTTAGTTTGGAGTTCCGCGCAGAGCCAATACTaGGTTGGTTCTCTTTACATG +
Preference number: 4 (lower is better)
Translates to: IFILGALFPFSLLLVWSSAQSQY*VGSLYM
Trigger: CATGTAAAGAGAACCAACTCAGTATTGGCTCTGCGC...GGAACTCCAAACTAACAGCAGCGAAAACGGAAACAGAGCACCCAAGATGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486829.1
CDS-3UTR TCA 90 bp GTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGGTGCACAGGATTCTCTaGACAGGGCTGAGCATAGTT +
Preference number: 4 (lower is better)
Translates to: VLLQTVPSVECKYCTGKMVHRIL*TGLSIV
Trigger: AACTATGCTCAGCCCTGTTCAGAGAATCCTGTGCAC...CATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496106.5
CDS-3UTR GCA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGTCTCACTCCACAGCTTaGTATCTCTCCGTTTCGTGC +
Preference number: 4 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTSHSTA*YLSVSC
Trigger: GCACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGA...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTATCTCACTCCACAGCTTaGTATCTCTCCGTTTCGTGC +
Preference number: 4 (lower is better)
Translates to: PDTWEIQHRVIVATDSSLSHSTA*YLSVSC
Trigger: GCACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGA...TAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGTCTCACTCCACAGCTTaGTATCTCTCCGTTTCGTGC +
Preference number: 4 (lower is better)
Translates to: VLLQTVPSVECKYCTGKMSHSTA*YLSVSC
Trigger: GCACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGA...CATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACATGGCGGCTACTTGATTaGTGCAGTAGCTATCATAGG +
Preference number: 4 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATWRLLD*CSSYHR
Trigger: CCTATGATAGCTACTGCAGCAATCAAGTAGCCGCCA...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTACTCCCTGTAGCTCTCTaGTCCCGGTGGTGGGATTTA +
Preference number: 4 (lower is better)
Translates to: KKCFSKPFHLWNANTVQVLPVAL*SRWWDL
Trigger: TAAATCCCACCACCGGGAGCAGAGAGCTACAGGGAG...TACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTTACTTTCACCGTGCCTaGTGTTTCCACAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLAYFHRA*CFHRKS
Trigger: ACTCTTCCTGTGGAAACAGCAGGCACGGTGAAAGTA...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACACGTTACTTTCACCGTaGCTGCTGTTTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYTLLSP*LLFPQE
Trigger: TTCCTGTGGAAACAGCAGGCACGGTGAAAGTAACGT...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTACGTTACTTTCACCGTaGCTGCTGTTTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLATLLSP*LLFPQE
Trigger: TTCCTGTGGAAACAGCAGGCACGGTGAAAGTAACGT...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp CTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGAACGTTACTTTCACCGTaGCTGCTGTTTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: LHPSRHLGNTTQGNSCHRTLLSP*LLFPQE
Trigger: TTCCTGTGGAAACAGCAGGCACGGTGAAAGTAACGT...TCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GCAGTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTTTCCCGAAGTGCACATaGTTCTGTCAGACGTTACTT +
Preference number: 4 (lower is better)
Translates to: AVTVLGTKVQIRETGPTCFPKCT*FCQTLL
Trigger: AAGTAACGTCTGACAGAAGCATGTGCACTTCGGGAA...ACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTAACTGTACAGGTAAGATaGAGGCCTGCTTCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: TQGNSCHRFQLTQTDWQLTVQVR*RPASRS
Trigger: ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGT...TAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTCAGATGAGTTCCTCATaGCCTATTTACAAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLAQMSSS*PIYKAV
Trigger: GACGGCCTTGTAAATAGGGCATGAGGAACTCATCTG...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGGAAGGCACTGGACCATaGTTTTCTCTCAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTEGTGP*FSLNGS
Trigger: GGAGCCATTGAGAGAAAAGCATGGTCCAGTGCCTTC...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp CTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGGTGCTCTGAAGTTGTTTTGCCGCTaGCGTTTAGGCTATGTACCA +
Preference number: 4 (lower is better)
Translates to: LTYVETAKANSIFILGALKLFCR*RLGYVP
Trigger: TGGTACATAGCCTAAACGGCAGCGGCAAAACAACTT...CAGAGCACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486829.1
CDS-3UTR GCA 90 bp CTAGGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGGTGATGGGAAAGTTGTTTTaGCGCTGCCGTTTAGGCTAT +
Preference number: 4 (lower is better)
Translates to: LGSLMSRLQRLTASSSWVMGKLF*RCRLGY
Trigger: ATAGCCTAAACGGCAGCGGCAAAACAACTTTCCCAT...CACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486829.1
CDS-3UTR CCA 90 bp CCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAAGTCTTCTTCTCCTTaGGAAAGCTCAAAGATCGCC +
Preference number: 4 (lower is better)
Translates to: PLHPSRHLGNTTQGNSCHKSSSP*ESSKIA
Trigger: GGCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTT...GTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GCAGTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTTGGAGAGTTTCAGCATaGGGTCATGATAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: AVTVLGTKVQIRETGPTCWRVSA*GHDRPF
Trigger: AAAAGGCCTATCATGACCCCATGCTGAAACTCTCCA...ACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp ATCAAAACATTCATTGACCACCTTCCCATAGGCCAACACTTGACAAACCTCTTTGGTCCAGCAGAGCTTTaGCGGCTACTTGATTGCTGC +
Preference number: 4 (lower is better)
Translates to: IKTFIDHLPIGQHLTNLFGPAEL*RLLDCC
Trigger: GCAGCAATCAAGTAGCCGCCAAAGCTCTGCTGGACC...AAAGAGGTTTGTCAAGTGTTGGCCTATGGGAAGGTGGTCAATGAATGTTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CCA 90 bp GCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTCTCAAGTGCTGCTGATCTaGATTATCATTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ANTVQVRCRPASRSAHASQVLLI*IIIWCV
Trigger: CACACACCAAATGATAATCCAGATCAGCAGCACTTG...AGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACCAAAGCTGCTCATTGTaGGTGACGGCTCGAGTGATC +
Preference number: 4 (lower is better)
Translates to: LKVTCLSTSPSIQTLGKYQSCSL*VTARVI
Trigger: GATCACTCGAGCCGTCACCCACAATGAGCAGCTTTG...GTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CCA 90 bp CTCTCCTGTGTTTCTATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTGTCTTTCACGGGGATTaGCTGACGGTACAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LSCVSINSVIDRVMVSLPVFHGD*LTVQLV
Trigger: TACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGAC...AGGAAGAGAGACCATGACTCTATCGATGACACTGTTTATAGAAACACAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGAGTCTTTCACGGGGATTaGCTGACGGTACAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: TWEIQHRVIVATDSSLHRVFHGD*LTVQLV
Trigger: TACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGAC...TCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGACTCACTGTCCGATTaGTCCATCTGCTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: HLWNANTVQVRCRPASRSDSLSD*SICSSF
Trigger: AAAACTTGAGCAGATGGACCAATCGGACAGTGAGTC...ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GCAGTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTGACTCACTGTCCGATTaGTCCATCTGCTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: AVTVLGTKVQIRETGPTCDSLSD*SICSSF
Trigger: AAAACTTGAGCAGATGGACCAATCGGACAGTGAGTC...ACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTCTACAGATACGAGAGACTaGGCCAACATGTATACTTTC +
Preference number: 4 (lower is better)
Translates to: ANTVQVRCRPASRSAHASTDTRD*ANMYTF
Trigger: GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGT...AGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCTTAAAGATTCAGAGCTaGCAGCCGCTTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGLKIQS*QPLLSW
Trigger: CCAGGACAGAAGCGGCTGCCAGCTCTGAATCTTTAA...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CTTGTTATCCTGGCAGGCCTTCCTAAGCCCTTTGGGTTCTATTCTGATGTTTTATTAAAGATTCAGAGCTaGCAGCCGCTTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LVILAGLPKPFGFYSDVLLKIQS*QPLLSW
Trigger: CCAGGACAGAAGCGGCTGCCAGCTCTGAATCTTTAA...TAAAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGCCTGCCAGGATAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTATGAGAGACACCTCCTaGTGCCATGTGCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLAMRDTS*CHVHFS
Trigger: ACTGAAATGCACATGGCACCAGGAGGTGTCTCTCAT...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTAGAAAGCCCAAAGCTCTaGCCTTTCTCAGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: PDTWEIQHRVIVATDSSLESPKL*PFSEGT
Trigger: AGTGCCTTCTGAGAAAGGCCAGAGCTTTGGGCTTTC...TAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCGAAAGCCCAAAGCTCTaGCCTTTCTCAGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGESPKL*PFSEGT
Trigger: AGTGCCTTCTGAGAAAGGCCAGAGCTTTGGGCTTTC...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp GCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTCTAATAAAGGCTGTTCTTaGCTTTCCTCTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ANTVQVRCRPASRSAHASNKGCS*LSSASV
Trigger: GACAGAAGCAGAGGAAAGCCAAGAACAGCCTTTATT...AGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CCA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGACAGCATCTTCATCTTaGGTGCTCTGTTTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: VPSVECKYCTGKMQACFPTASSS*VLCFRF
Trigger: AAAACGGAAACAGAGCACCCAAGATGAAGATGCTGT...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338458.8
ENST00000496106.5
CDS-3UTR CCA 90 bp ATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGGTGCTCTGTTTCCGTTCGCTGCTGTTAGTTTaGAGTTCCCCTAAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: MSRLQRLTASSSWVLCFRSLLLV*SSPKAD
Trigger: ATCTGCTTTAGGGGAACTCCAAACTAACAGCAGCGA...ACGGAAACAGAGCACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486829.1
CDS-3UTR TCA 90 bp AAATTAGGCCCACTGAGTAATGTTACAGATGAATCCACATTCCAGTTGACCATTGAGCGCTGCAGGGTTTaGCTGAAGCGCTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: KLGPLSNVTDESTFQLTIERCRV*LKRFNG
Trigger: GCCATTAAAGCGCTTCAGTCAAACCCTGCAGCGCTC...AATGGTCAACTGGAATGTGGATTCATCTGTAACATTACTCAGTGGGCCTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR TCA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACATTGGATGTAAGCATCTaGTTGACGCACACATCGAAG +
Preference number: 4 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATLDVSI*LTHTSK
Trigger: CTTCGATGTGTGCGTCAATCAGATGCTTACATCCAA...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTCAAAGATCGCCTCCTaGCGTTTGATTTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSSKIAS*RLISLD
Trigger: ATCCAAGGAAATCAAACGTCAGGAGGCGATCTTTGA...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ATACAAATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCCTAACATCTCGAAGCTaGCTAAGGAGCTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: IQMQFDFKTVAFLFPPAALTSRS*LRSSSC
Trigger: ACATGAAGAGCTCCTTAGTCAGCTTCGAGATGTTAG...GGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR TCA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCCTAACATCTCGAAGCTaGCTAAGGAGCTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSLTSRS*LRSSSC
Trigger: ACATGAAGAGCTCCTTAGTCAGCTTCGAGATGTTAG...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp TACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTAAATCCTGGACTCGGTaGTCTTGCTTTTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: YSTRDKGTDTRDWANMYTKSWTR*SCFLWS
Trigger: GGACCACAAAAAGCAAGATCACCGAGTCCAGGATTT...AGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCAAATCCTGGACTCGGTaGTCTTGCTTTTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: HPSRHLGNTTQGNSCHRFKSWTR*SCFLWS
Trigger: GGACCACAAAAAGCAAGATCACCGAGTCCAGGATTT...GAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTAAATCCTGGACTCGGTaGTCTTGCTTTTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: TDSSLHRQIGSYSTRDKGKSWTR*SCFLWS
Trigger: GGACCACAAAAAGCAAGATCACCGAGTCCAGGATTT...ACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACACACCAGTCTTGGTGTTaGTTTCTGCCACAATTCCCT +
Preference number: 4 (lower is better)
Translates to: DSSLHRQIGSYSTRDKGTHQSWC*FLPQFP
Trigger: AGGGAATTGTGGCAGAAATCAACACCAAGACTGGTG...TGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACACCAGTCTTGGTGTTaGTTTCTGCCACAATTCCCT +
Preference number: 4 (lower is better)
Translates to: PAYTDRLAVTVLGTKVQIHQSWC*FLPQFP
Trigger: AGGGAATTGTGGCAGAAATCAACACCAAGACTGGTG...TATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAACACCAGTCTTGGTGTTaGTTTCTGCCACAATTCCCT +
Preference number: 4 (lower is better)
Translates to: LGTKVQIRETGPTCILSQHQSWC*FLPQFP
Trigger: AGGGAATTGTGGCAGAAATCAACACCAAGACTGGTG...TTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTTGTAGCGAGTGGGTCTaGCTTTGGGATCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: TDSSLHRQIGSYSTRDKGCSEWV*LWDPFL
Trigger: CAAAAATGGATCCCAAAGTCAGACCCACTCGCTACA...ACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACGCCACTGCTGTTTGTTaGAAGTGTCATTGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYATAVC*KCHWLV
Trigger: TACAAGCCAATGACACTTTCAACAAACAGCAGTGGC...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATGTCCATACTACAGTCTaGCTCACTGTCCGATTGGTC +
Preference number: 4 (lower is better)
Translates to: GNTTQGNSCHRFQLTQTDVHTTV*LTVRLV
Trigger: GACCAATCGGACAGTGAGTCAGACTGTAGTATGGAC...ATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ACTAGTGCTGGTGTGGGTATAATTTTGCACAGGTCATCCTTAATATTTACACTTGCTCACAGTCGAGGCTaGCCTCACTCGTGTCCATAC +
Preference number: 4 (lower is better)
Translates to: TSAGVGIILHRSSLIFTLAHSRG*PHSCPY
Trigger: GTATGGACACGAGTGAGGTCAGCCTCGACTGTGAGC...AAGTGTAAATATTAAGGATGACCTGTGCAAAATTATACCCACACCAGCACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp GATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACATCCCACAGAAGGTTCTaGCGAAGTGCTTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: DSSLHRQIGSYSTRDKGTSHRRF*RSAFHS
Trigger: GGAATGAAAAGCACTTCGTCAGAACCTTCTGTGGGA...TGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGTCCCACAGAAGGTTCTaGCGAAGTGCTTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQSHRRF*RSAFHS
Trigger: GGAATGAAAAGCACTTCGTCAGAACCTTCTGTGGGA...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp CAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAACCAGAGATGGCAAATTaGCGACCCAAAAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: QLKVTCLSTSPSIQTLGKPEMAN*RPKSRA
Trigger: TGCTCTGCTTTTGGGTCGTCAATTTGCCATCTCTGG...TTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp AAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATCCCAACACACTGGCTaGTGGCTTCTAAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KCFSKPFHLWNANTVQVRSQHTG*WLLKVA
Trigger: AGCCACTTTTAGAAGCCATCAGCCAGTGTGTTGGGA...TCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp ACAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAATCCCAACACACTGGCTaGTGGCTTCTAAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: TTESNLFEYLSIHPDTWESQHTG*WLLKVA
Trigger: AGCCACTTTTAGAAGCCATCAGCCAGTGTGTTGGGA...TTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTATCAACAGCCTTCTTTaGAATAGACTGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHAINSLL*NRLSPS
Trigger: GCTTGGAGACAGTCTATTTCAAAGAAGGCTGTTGAT...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp AATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGTCTCACTCCACAGCTTaGTATCTCTCCGTTTCGTGC +
Preference number: 4 (lower is better)
Translates to: NTTQGNSCHRFQLTQTDWSHSTA*YLSVSC
Trigger: GCACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGA...CCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACCGGCTACTTGATTGCTaGAGTAGCTATCATAGGAGC +
Preference number: 4 (lower is better)
Translates to: DTWEIQHRVIVATDSSLHRLLDC*SSYHRS
Trigger: GCTCCTATGATAGCTACTGCAGCAATCAAGTAGCCG...GTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGCGGCTACTTGATTGCTaGAGTAGCTATCATAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQRLLDC*SSYHRS
Trigger: GCTCCTATGATAGCTACTGCAGCAATCAAGTAGCCG...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp TACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTCGGCTACTTGATTGCTaGAGTAGCTATCATAGGAGC +
Preference number: 4 (lower is better)
Translates to: YSTRDKGTDTRDWANMYTRLLDC*SSYHRS
Trigger: GCTCCTATGATAGCTACTGCAGCAATCAAGTAGCCG...AGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGATGGCGGCTACTTGATTaGTGCAGTAGCTATCATAGG +
Preference number: 4 (lower is better)
Translates to: AYTDRLAVTVLGTKVQIRWRLLD*CSSYHR
Trigger: CCTATGATAGCTACTGCAGCAATCAAGTAGCCGCCA...TCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTCTCTTGGTGTTGATTTCTaGCACAATTCCCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: ANTVQVRCRPASRSAHASLGVDF*HNSLND
Trigger: ATCATTCAGGGAATTGTGGCAGAAATCAACACCAAG...AGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGCTTGGTGTTGATTTCTaGCACAATTCCCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: VPSVECKYCTGKMQACFPLGVDF*HNSLND
Trigger: ATCATTCAGGGAATTGTGGCAGAAATCAACACCAAG...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACATGGAACAGGAAAACATaGAGTTTCACGCCCCGATTG +
Preference number: 4 (lower is better)
Translates to: TRDKGTDTRDWANMYTFTWNRKT*SFTPRL
Trigger: CAATCGGGGCGTGAAACTGCATGTTTTCCTGTTCCA...TGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGTGGAACAGGAAAACATaGAGTTTCACGCCCCGATTG +
Preference number: 4 (lower is better)
Translates to: IPAYTDRLAVTVLGTKVQWNRKT*SFTPRL
Trigger: CAATCGGGGCGTGAAACTGCATGTTTTCCTGTTCCA...CTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCTGGAACAGGAAAACATaGAGTTTCACGCCCCGATTG +
Preference number: 4 (lower is better)
Translates to: HPSRHLGNTTQGNSCHRFWNRKT*SFTPRL
Trigger: CAATCGGGGCGTGAAACTGCATGTTTTCCTGTTCCA...GAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AGTATGAAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACTCCCTGTAGCTCTCTaGTCCCGGTGGTGGGATTTA +
Preference number: 4 (lower is better)
Translates to: SMKKCFSKPFHLWNANTVLPVAL*SRWWDL
Trigger: TAAATCCCACCACCGGGAGCAGAGAGCTACAGGGAG...TACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTTCATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACATCCGATTGGTCCATCTaGTCAAGTTTTGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATSDWSI*SSFVSP
Trigger: GGGAGAAACAAAACTTGAGCAGATGGACCAATCGGA...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGATACTTTCACCGTGCCTaGTGTTTCCACAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: AYTDRLAVTVLGTKVQIRYFHRA*CFHRKS
Trigger: ACTCTTCCTGTGGAAACAGCAGGCACGGTGAAAGTA...TCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGTACTTTCACCGTGCCTaGTGTTTCCACAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTYFHRA*CFHRKS
Trigger: ACTCTTCCTGTGGAAACAGCAGGCACGGTGAAAGTA...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATATACTTTCACCGTGCCTaGTGTTTCCACAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: VTVLGTKVQIRETGPTCIYFHRA*CFHRKS
Trigger: ACTCTTCCTGTGGAAACAGCAGGCACGGTGAAAGTA...TATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCACGTTACTTTCACCGTaGCTGCTGTTTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGTLLSP*LLFPQE
Trigger: TTCCTGTGGAAACAGCAGGCACGGTGAAAGTAACGT...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CAGATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTGGCAGGCCTTCCTATTCCCGAAGTGCACATaGTTCTGTCAGACGTTACTT +
Preference number: 4 (lower is better)
Translates to: QMKHNEYRAFLLSWQAFLFPKCT*FCQTLL
Trigger: AAGTAACGTCTGACAGAAGCATGTGCACTTCGGGAA...TAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp ACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAAAAGTATGCCTGCTTCCCGAAGTaGACATGCTTCTGTCAGACG +
Preference number: 4 (lower is better)
Translates to: TKVQIRETGPTCILSQKYACFPK*TCFCQT
Trigger: CGTCTGACAGAAGCATGTGCACTTCGGGAAGCAGGC...ATACTTTTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACACTGTACAGGTAAGATaGAGGCCTGCTTCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: SNLFEYLSIHPDTWEIQHTVQVR*RPASRS
Trigger: ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGT...GTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR GCA 90 bp TTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAACTGTACAGGTAAGATaGAGGCCTGCTTCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: LGNTTQGNSCHRFQLTQTTVQVR*RPASRS
Trigger: ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGT...TGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTACACAGGGTAATAGTTaGCACAGATTCCAGCTTACA +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHATQGNS*HRFQLT
Trigger: TGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ACAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAGAAGGCACTGGACCATaGTTTTCTCTCAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: TTESNLFEYLSIHPDTWEEGTGP*FSLNGS
Trigger: GGAGCCATTGAGAGAAAAGCATGGTCCAGTGCCTTC...TTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp CTTGTTATCCTGGCAGGCCTTCCTAAGCCCTTTGGGTTCTATTCTGATGTTTTAAAGTTGTTTTGCCGCTaGCGTTTAGGCCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LVILAGLPKPFGFYSDVLKLFCR*RLGLSL
Trigger: CAAGGAAAGGCCTAAACGGCAGCGGCAAAACAACTT...TAAAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGCCTGCCAGGATAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338458.8
CDS-3UTR GCA 90 bp GTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGATGGGAAAGTTGTTTTaGCGCTGCCGTTTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VLLQTVPSVECKYCTGKMMGKLF*RCRLGL
Trigger: AAGGCCTAAACGGCAGCGGCAAAACAACTTTCCCAT...CATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338458.8
CDS-3UTR GCA 90 bp CCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTCTGAACATAGTAGGTaGCTGGAAAAATCTTTCGTG +
Preference number: 4 (lower is better)
Translates to: PSVECKYCTGKMQACFPKSEHSR*LEKSFV
Trigger: CACGAAAGATTTTTCCAGGCACCTACTATGTTCAGA...CTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp TGTTTCCGTTTTCGCCCTCTGAAATTCCAGGCTTTAGGAGAGGGAAACATGGGAAAGTTGTTTTGCCGCTaGCGTTTAGGCATGAATTCT +
Preference number: 4 (lower is better)
Translates to: CFRFRPLKFQALGEGNMGKLFCR*RLGMNS
Trigger: AGAATTCATGCCTAAACGGCAGCGGCAAAACAACTT...TCCCATGTTTCCCTCTCCTAAAGCCTGGAATTTCAGAGGGCGAAAACGGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR CCA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCAAGTCTTCTTCTCCTTaGGAAAGCTCAAAGATCGCC +
Preference number: 4 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSKSSSP*ESSKIA
Trigger: GGCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTT...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTCTTGTTCTGTCATTATaGAGAGTTTCAGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: HLWNANTVQVRCRPASRSLVLSL*RVSAWG
Trigger: ACCCCATGCTGAAACTCTCCATAATGACAGAACAAG...ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp TGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATCTTGTTCTGTCATTATaGAGAGTTTCAGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: WNANTVQVRCRPASRSAHLVLSL*RVSAWG
Trigger: ACCCCATGCTGAAACTCTCCATAATGACAGAACAAG...ATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp TTACCTGCTTGTTTCACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCGCCAGCCCACGAGGATaGGACCAACATGTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: LPACFTEYHVRYSIDIAIASPRG*DQHVQS
Trigger: CGACTGAACATGTTGGTCCCATCCTCGTGGGCTGGC...GATAGCAATATCTATCGAGTATCTAACATGATACTCGGTGAAACAAGCAGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp AAATTAGGCCCACTGAGTAATGTTACAGATGAATCCACATTCCAGTTGACCATTGGTCCAGCAGAGCTTTaGCGGCTACTTGATTGCTGC +
Preference number: 4 (lower is better)
Translates to: KLGPLSNVTDESTFQLTIGPAEL*RLLDCC
Trigger: GCAGCAATCAAGTAGCCGCCAAAGCTCTGCTGGACC...AATGGTCAACTGGAATGTGGATTCATCTGTAACATTACTCAGTGGGCCTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp TTTCCACCAGCTGCCCACTCCCTCCAAACTACCACGGCCAAAAACATTCAACAGATCTGGATTATCATTTaGTGTGTGCCTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: FPPAAHSLQTTTAKNIQQIWIII*CVPQDF
Trigger: GAAATCTTGAGGCACACACCAAATGATAATCCAGAT...CTGTTGAATGTTTTTGGCCGTGGTAGTTTGGAGGGAGTGGGCAGCTGGTGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp ACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATAGTCTTTCACGGGGATTaGCTGACGGTACAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: TESNLFEYLSIHPDTWEIVFHGD*LTVQLV
Trigger: TACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGAC...TATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTACAGATACGAGAGACTaGGCCAACATGTATACTTTC +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHATDTRD*ANMYTF
Trigger: GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGT...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CTCTCCTGTGTTTCTATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTTTAAAGATTCAGAGCTaGCAGCCGCTTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSCVSINSVIDRVMVSLPLKIQS*QPLLSW
Trigger: CCAGGACAGAAGCGGCTGCCAGCTCTGAATCTTTAA...AGGAAGAGAGACCATGACTCTATCGATGACACTGTTTATAGAAACACAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CCATCCCAATACACAGATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATATGAGAGACACCTCCTaGTGCCATGTGCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: PSQYTDEFLMPYLQGRLNMRDTS*CHVHFS
Trigger: ACTGAAATGCACATGGCACCAGGAGGTGTCTCTCAT...ATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATCTGTGTATTGGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCATGAGAGACACCTCCTaGTGCCATGTGCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: IHPDTWEIQHRVIVATDSMRDTS*CHVHFS
Trigger: ACTGAAATGCACATGGCACCAGGAGGTGTCTCTCAT...GGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGATGAGAGACACCTCCTaGTGCCATGTGCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQMRDTS*CHVHFS
Trigger: ACTGAAATGCACATGGCACCAGGAGGTGTCTCTCAT...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ACAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAGAAAGCCCAAAGCTCTaGCCTTTCTCAGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: TTESNLFEYLSIHPDTWEESPKL*PFSEGT
Trigger: AGTGCCTTCTGAGAAAGGCCAGAGCTTTGGGCTTTC...TTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGAGAAAGCCCAAAGCTCTaGCCTTTCTCAGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: TWEIQHRVIVATDSSLHRESPKL*PFSEGT
Trigger: AGTGCCTTCTGAGAAAGGCCAGAGCTTTGGGCTTTC...TCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCAATAAAGGCTGTTCTTaGCTTTCCTCTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TVPSVECKYCTGKMQACFNKGCS*LSSASV
Trigger: GACAGAAGCAGAGGAAAGCCAAGAACAGCCTTTATT...GAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
3UTR CAA 72 bp TATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTaGGGTGCTCTGTTTCCGTTTTCGCCCTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: YVETAKANSIFI*GALFPFSPSEI
Trigger: AATTTCAGAGGGCGAAAACGGAAACAGAGCACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR TCA 90 bp GTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATATTGGATGTAAGCATCTaGTTGACGCACACATCGAAG +
Preference number: 4 (lower is better)
Translates to: VTVLGTKVQIRETGPTCILDVSI*LTHTSK
Trigger: CTTCGATGTGTGCGTCAATCAGATGCTTACATCCAA...TATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CTTGTTATCCTGGCAGGCCTTCCTAAGCCCTTTGGGTTCTATTCTGATGTTTTATTGGATGTAAGCATCTaGTTGACGCACACATCGAAG +
Preference number: 4 (lower is better)
Translates to: LVILAGLPKPFGFYSDVLLDVSI*LTHTSK
Trigger: CTTCGATGTGTGCGTCAATCAGATGCTTACATCCAA...TAAAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGCCTGCCAGGATAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp CCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATATCAAAGATCGCCTCCTaGCGTTTGATTTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: PAYTDRLAVTVLGTKVQISKIAS*RLISLD
Trigger: ATCCAAGGAAATCAAACGTCAGGAGGCGATCTTTGA...TATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGATCAAAGATCGCCTCCTaGCGTTTGATTTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: AYTDRLAVTVLGTKVQIRSKIAS*RLISLD
Trigger: ATCCAAGGAAATCAAACGTCAGGAGGCGATCTTTGA...TCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACTAACATCTCGAAGCTaGCTAAGGAGCTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: PAYTDRLAVTVLGTKVQILTSRS*LRSSSC
Trigger: ACATGAAGAGCTCCTTAGTCAGCTTCGAGATGTTAG...TATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp TACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTCTAACATCTCGAAGCTaGCTAAGGAGCTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: YSTRDKGTDTRDWANMYTLTSRS*LRSSSC
Trigger: ACATGAAGAGCTCCTTAGTCAGCTTCGAGATGTTAG...AGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTCTGCCACAATTCCCTaGATGATATTTATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSVECKYCTGKMQACFPKSATIP*MIFIAS
Trigger: AGAAGCTATAAATATCATTCAGGGAATTGTGGCAGA...CTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTCTTCTGCCACAATTCCCTaGATGATATTTATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ANTVQVRCRPASRSAHASSATIP*MIFIAS
Trigger: AGAAGCTATAAATATCATTCAGGGAATTGTGGCAGA...AGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CTCTCCTGTGTTTCTATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTCACCAGTCTTGGTGTTaGTTTCTGCCACAATTCCCT +
Preference number: 4 (lower is better)
Translates to: LSCVSINSVIDRVMVSLPHQSWC*FLPQFP
Trigger: AGGGAATTGTGGCAGAAATCAACACCAAGACTGGTG...AGGAAGAGAGACCATGACTCTATCGATGACACTGTTTATAGAAACACAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp AAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGACACCAGTCTTGGTGTTaGTTTCTGCCACAATTCCCT +
Preference number: 4 (lower is better)
Translates to: KCFSKPFHLWNANTVQVRHQSWC*FLPQFP
Trigger: AGGGAATTGTGGCAGAAATCAACACCAAGACTGGTG...TCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp TTACCTGCTTGTTTCACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCTTCTCTCATTGTTGCTaGATGCCCCTCGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPACFTEYHVRYSIDIAIFSHCC*MPLAGS
Trigger: GCTCCCTGCGAGGGGCATTCAGCAACAATGAGAGAA...GATAGCAATATCTATCGAGTATCTAACATGATACTCGGTGAAACAAGCAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR TCA 90 bp ACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAGCCACTGCTGTTTGTTaGAAGTGTCATTGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: TRDKGTDTRDWANMYTFTATAVC*KCHWLV
Trigger: TACAAGCCAATGACACTTTCAACAAACAGCAGTGGC...TGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CTTGTTATCCTGGCAGGCCTTCCTAAGCCCTTTGGGTTCTATTCTGATGTTTTAGCCACTGCTGTTTGTTaGAAGTGTCATTGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LVILAGLPKPFGFYSDVLATAVC*KCHWLV
Trigger: TACAAGCCAATGACACTTTCAACAAACAGCAGTGGC...TAAAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGCCTGCCAGGATAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp CCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATAGCCACTGCTGTTTGTTaGAAGTGTCATTGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: PAYTDRLAVTVLGTKVQIATAVC*KCHWLV
Trigger: TACAAGCCAATGACACTTTCAACAAACAGCAGTGGC...TATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGAACTGTTTCTTTGGCTTaGCGAATACAGTTAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LHPSRHLGNTTQGNSCHRTVSLA*RIQLSH
Trigger: GTGGCTTAACTGTATTCGTCAAGCCAAAGAAACAGT...TCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp CAGATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTGGCAGGCCTTCCTAACTGTTTCTTTGGCTTaGCGAATACAGTTAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QMKHNEYRAFLLSWQAFLTVSLA*RIQLSH
Trigger: GTGGCTTAACTGTATTCGTCAAGCCAAAGAAACAGT...TAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp ACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGCTTTGGGTTCTATTCTaGTGTTTTAGGCTAGCAACC +
Preference number: 4 (lower is better)
Translates to: TTQGNSCHRFQLTQTDWQLWVLF*CFRLAT
Trigger: GGTTGCTAGCCTAAAACATCAGAATAGAACCCAAAG...CTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp CTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGAGCAGATGAAACACAATaGATACAGGGCCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: LHPSRHLGNTTQGNSCHRADETQ*IQGLLV
Trigger: AACAAGAAGGCCCTGTATTCATTGTGTTTCATCTGC...TCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp TTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACATCCCACAGAAGGTTCTaGCGAAGTGCTTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: LGNTTQGNSCHRFQLTQTSHRRF*RSAFHS
Trigger: GGAATGAAAAGCACTTCGTCAGAACCTTCTGTGGGA...TGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp CTTGTTATCCTGGCAGGCCTTCCTAAGCCCTTTGGGTTCTATTCTGATGTTTTACATCAAAACATTCATTaGCCACCTTCCCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: LVILAGLPKPFGFYSDVLHQNIH*PPSHRP
Trigger: TGGCCTATGGGAAGGTGGTCAATGAATGTTTTGATG...TAAAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGCCTGCCAGGATAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp CCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACCAAAATGCAGAGGATaGATCTCCCAAGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: PAYTDRLAVTVLGTKVQIPKCRG*ISQDES
Trigger: GCTTTCATCTTGGGAGATTCATCCTCTGCATTTTGG...TATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413728.6
CDS-3UTR TCA 90 bp ACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCTGGAAAAATCTTTCGTaGATTTGGAATCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TVPSVECKYCTGKMQACFWKNLS*IWNPAE
Trigger: CTCAGCAGGATTCCAAATTCACGAAAGATTTTTCCA...GAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTTATCATTTGGTGTGTaGCTCAAGATTTCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHALSFGV*LKISRR
Trigger: TCTCCGAGAAATCTTGAGGCACACACCAAATGATAA...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTCTTGGTGTTGATTTCTaGCACAATTCCCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: HLWNANTVQVRCRPASRSLGVDF*HNSLND
Trigger: ATCATTCAGGGAATTGTGGCAGAAATCAACACCAAG...ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCTCCGATTGGTCCATCTaGTCAAGTTTTGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: STRDKGTDTRDWANMYTFSDWSI*SSFVSP
Trigger: GGGAGAAACAAAACTTGAGCAGATGGACCAATCGGA...GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATATCCGATTGGTCCATCTaGTCAAGTTTTGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VTVLGTKVQIRETGPTCISDWSI*SSFVSP
Trigger: GGGAGAAACAAAACTTGAGCAGATGGACCAATCGGA...TATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGATCCGATTGGTCCATCTaGTCAAGTTTTGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: AYTDRLAVTVLGTKVQIRSDWSI*SSFVSP
Trigger: GGGAGAAACAAAACTTGAGCAGATGGACCAATCGGA...TCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTATCCGATTGGTCCATCTaGTCAAGTTTTGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TQGNSCHRFQLTQTDWQLSDWSI*SSFVSP
Trigger: GGGAGAAACAAAACTTGAGCAGATGGACCAATCGGA...TAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTACTTTCACCGTGCCTaGTGTTTCCACAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: GNTTQGNSCHRFQLTQTDYFHRA*CFHRKS
Trigger: ACTCTTCCTGTGGAAACAGCAGGCACGGTGAAAGTA...ATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATACGTTACTTTCACCGTaGCTGCTGTTTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: GNTTQGNSCHRFQLTQTDTLLSP*LLFPQE
Trigger: TTCCTGTGGAAACAGCAGGCACGGTGAAAGTAACGT...ATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGTTCCCGAAGTGCACATaGTTCTGTCAGACGTTACTT +
Preference number: 4 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQFPKCT*FCQTLL
Trigger: AAGTAACGTCTGACAGAAGCATGTGCACTTCGGGAA...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTTCCCGAAGTGCACATaGTTCTGTCAGACGTTACTT +
Preference number: 4 (lower is better)
Translates to: GNSCHRFQLTQTDWQLQYFPKCT*FCQTLL
Trigger: AAGTAACGTCTGACAGAAGCATGTGCACTTCGGGAA...GTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTTTCCCGAAGTGCACATaGTTCTGTCAGACGTTACTT +
Preference number: 4 (lower is better)
Translates to: TDSSLHRQIGSYSTRDKGFPKCT*FCQTLL
Trigger: AAGTAACGTCTGACAGAAGCATGTGCACTTCGGGAA...ACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACATTCCCGAAGTGCACATaGTTCTGTCAGACGTTACTT +
Preference number: 4 (lower is better)
Translates to: DSSLHRQIGSYSTRDKGTFPKCT*FCQTLL
Trigger: AAGTAACGTCTGACAGAAGCATGTGCACTTCGGGAA...TGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ACTAGTGCTGGTGTGGGTATAATTTTGCACAGGTCATCCTTAATATTTACACTTGCCTGCTTCCCGAAGTaGACATGCTTCTGTCAGACG +
Preference number: 4 (lower is better)
Translates to: TSAGVGIILHRSSLIFTLACFPK*TCFCQT
Trigger: CGTCTGACAGAAGCATGTGCACTTCGGGAAGCAGGC...AAGTGTAAATATTAAGGATGACCTGTGCAAAATTATACCCACACCAGCACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR GCA 90 bp CCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACGTTCCATCTGTGGAATaGAAATACTGTACAGGTAAG +
Preference number: 4 (lower is better)
Translates to: PLHPSRHLGNTTQGNSCHVPSVE*KYCTGK
Trigger: CTTACCTGTACAGTATTTGCATTCCACAGATGGAAC...GTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGACACAGGGTAATAGTTaGCACAGATTCCAGCTTACA +
Preference number: 4 (lower is better)
Translates to: TTQGNSCHRFQLTQTDWQTQGNS*HRFQLT
Trigger: TGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT...CTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATCAGATGAGTTCCTCATaGCCTATTTACAAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GNTTQGNSCHRFQLTQTDQMSSS*PIYKAV
Trigger: GACGGCCTTGTAAATAGGGCATGAGGAACTCATCTG...ATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACTGCAGCAGGTTCACTTaGTGTATCAATAACGACTTG +
Preference number: 4 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYCSRFT*CINNDL
Trigger: CAAGTCGTTATTGATACAGCAAGTGAACCTGCTGCA...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CCA 90 bp ATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGAAGTCTTCTTCTCCTTaGGAAAGCTCAAAGATCGCC +
Preference number: 4 (lower is better)
Translates to: IPAYTDRLAVTVLGTKVQKSSSP*ESSKIA
Trigger: GGCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTT...CTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAATGGAGAGTTTCAGCATaGGGTCATGATAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LGTKVQIRETGPTCILSQWRVSA*GHDRPF
Trigger: AAAAGGCCTATCATGACCCCATGCTGAAACTCTCCA...TTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACACTTGTTCTGTCATTATaGAGAGTTTCAGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATLVLSL*RVSAWG
Trigger: ACCCCATGCTGAAACTCTCCATAATGACAGAACAAG...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACTACCAGGCGGCTTCTTaGAATATCGAGGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: DTWEIQHRVIVATDSSLHYQAAS*NIEEIP
Trigger: TGGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTA...GTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACCAAGTGCTGCTGATCTaGATTATCATTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYQVLLI*IIIWCV
Trigger: CACACACCAAATGATAATCCAGATCAGCAGCACTTG...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp AGTATGAAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTAGTCTTTCACGGGGATTaGCTGACGGTACAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SMKKCFSKPFHLWNANTVVFHGD*LTVQLV
Trigger: TACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGAC...TACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTTCATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CCATCCCAATACACAGATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATGACTCACTGTCCGATTaGTCCATCTGCTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: PSQYTDEFLMPYLQGRLNDSLSD*SICSSF
Trigger: AAAACTTGAGCAGATGGACCAATCGGACAGTGAGTC...ATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATCTGTGTATTGGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp GGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACGACTCACTGTCCGATTaGTCCATCTGCTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: GNSCHRFQLTQTDWQLQYDSLSD*SICSSF
Trigger: AAAACTTGAGCAGATGGACCAATCGGACAGTGAGTC...GTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTACAGATACGAGAGACTaGGCCAACATGTATACTTTC +
Preference number: 4 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLATDTRD*ANMYTF
Trigger: GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGT...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGAACAGATACGAGAGACTaGGCCAACATGTATACTTTC +
Preference number: 4 (lower is better)
Translates to: LHPSRHLGNTTQGNSCHRTDTRD*ANMYTF
Trigger: GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGT...TCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTGTTCACTTCATGAGTTaGTCTTTCCTGATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHAVHFMS*SFLILS
Trigger: AGAGAGAATCAGGAAAGACCAACTCATGAAGTGAAC...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTCATCGATAGAGTCATaGTCTCTCTTCCTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TTQGNSCHRFQLTQTDWQSSIES*SLFLVA
Trigger: AGCAACAAGGAAGAGAGACCATGACTCTATCGATGA...CTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCATGCTTTTCTCTCAATaGCTCCCACAGAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: IHPDTWEIQHRVIVATDSMLFSQ*LPQKVL
Trigger: CAGAACCTTCTGTGGGAGCCATTGAGAGAAAAGCAT...GGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTAATGCTTTTCTCTCAATaGCTCCCACAGAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PDTWEIQHRVIVATDSSLMLFSQ*LPQKVL
Trigger: CAGAACCTTCTGTGGGAGCCATTGAGAGAAAAGCAT...TAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAAGCACAGAACCAGAGATaGCAAATTGACGACCCAAAA +
Preference number: 4 (lower is better)
Translates to: LGTKVQIRETGPTCILSQAQNQR*QIDDPK
Trigger: TTTTGGGTCGTCAATTTGCCATCTCTGGTTCTGTGC...TTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CCA 90 bp ACTAGGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGGTACAGCATCTTCATCTTaGGTGCTCTGTTTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: TRLTYVETAKANSIFILGTASSS*VLCFRF
Trigger: AAAACGGAAACAGAGCACCCAAGATGAAGATGCTGT...ACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477833.5
ENST00000486829.1
CDS-3UTR CCA 90 bp CTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGAAGTAGCCAATTGTGGTaGCAAACCTCAATCATTTCC +
Preference number: 4 (lower is better)
Translates to: LHPSRHLGNTTQGNSCHRSSQLW*QTSIIS
Trigger: GGAAATGATTGAGGTTTGCCACCACAATTGGCTACT...TCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413728.6
3UTR CAA 72 bp CTTCTTGGAATATCGAGGAAATTCCAGAGATCTAGTTaGCGGCTAAAGGGGGATTCTAAACATCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LLGISRKFQRSS*RLKGDSKHRCR
Trigger: CCTACAGCGATGTTTAGAATCCCCCTTTAGCCGCAAACTAGATCTCTGGAATTTCCTCGATATTCCAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR TCA 90 bp AGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACTTGGATGTAAGCATCTaGTTGACGCACACATCGAAG +
Preference number: 4 (lower is better)
Translates to: SNLFEYLSIHPDTWEIQHLDVSI*LTHTSK
Trigger: CTTCGATGTGTGCGTCAATCAGATGCTTACATCCAA...GTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR TCA 90 bp ACAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAATTGGATGTAAGCATCTaGTTGACGCACACATCGAAG +
Preference number: 4 (lower is better)
Translates to: TTESNLFEYLSIHPDTWELDVSI*LTHTSK
Trigger: CTTCGATGTGTGCGTCAATCAGATGCTTACATCCAA...TTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR TCA 90 bp AGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACCTAACATCTCGAAGCTaGCTAAGGAGCTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: SNLFEYLSIHPDTWEIQHLTSRS*LRSSSC
Trigger: ACATGAAGAGCTCCTTAGTCAGCTTCGAGATGTTAG...GTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000496106.5
CDS-3UTR TCA 90 bp ATGAAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGAAATCCTGGACTCGGTaGTCTTGCTTTTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: MKKCFSKPFHLWNANTVQKSWTR*SCFLWS
Trigger: GGACCACAAAAAGCAAGATCACCGAGTCCAGGATTT...CTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATATGTAGCGAGTGGGTCTaGCTTTGGGATCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: TESNLFEYLSIHPDTWEICSEWV*LWDPFL
Trigger: CAAAAATGGATCCCAAAGTCAGACCCACTCGCTACA...TATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR TCA 90 bp CTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACGCCACTGCTGTTTGTTaGAAGTGTCATTGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LKVTCLSTSPSIQTLGKYATAVC*KCHWLV
Trigger: TACAAGCCAATGACACTTTCAACAAACAGCAGTGGC...GTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR TCA 90 bp AGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACTGTTTCTTTGGCTTaGCGAATACAGTTAAGCCAC +
Preference number: 4 (lower is better)
Translates to: STRDKGTDTRDWANMYTFTVSLA*RIQLSH
Trigger: GTGGCTTAACTGTATTCGTCAAGCCAAAGAAACAGT...GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGAACTGTTTCTTTGGCTTaGCGAATACAGTTAAGCCAC +
Preference number: 4 (lower is better)
Translates to: AYTDRLAVTVLGTKVQIRTVSLA*RIQLSH
Trigger: GTGGCTTAACTGTATTCGTCAAGCCAAAGAAACAGT...TCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTAATCCCAATACACAGATaGGTTCCTCATGCCCTATTT +
Preference number: 4 (lower is better)
Translates to: TQGNSCHRFQLTQTDWQLIPIHR*VPHALF
Trigger: AAATAGGGCATGAGGAACTCATCTGTGTATTGGGAT...TAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp ACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTATCCCAATACACAGATaGGTTCCTCATGCCCTATTT +
Preference number: 4 (lower is better)
Translates to: TDSSLHRQIGSYSTRDKGIPIHR*VPHALF
Trigger: AAATAGGGCATGAGGAACTCATCTGTGTATTGGGAT...ACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp ATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATCCCAATACACAGATaGGTTCCTCATGCCCTATTT +
Preference number: 4 (lower is better)
Translates to: IPAYTDRLAVTVLGTKVQIPIHR*VPHALF
Trigger: AAATAGGGCATGAGGAACTCATCTGTGTATTGGGAT...CTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp TACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTCAAACTTGCACTGGATaGAGTTGCAAAGTTCAGACA +
Preference number: 4 (lower is better)
Translates to: YSTRDKGTDTRDWANMYTQTCTG*SCKVQT
Trigger: TGTCTGAACTTTGCAACTTCATCCAGTGCAAGTTTG...AGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp ATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCCAAACTTGCACTGGATaGAGTTGCAAAGTTCAGACA +
Preference number: 4 (lower is better)
Translates to: IHPDTWEIQHRVIVATDSQTCTG*SCKVQT
Trigger: TGTCTGAACTTTGCAACTTCATCCAGTGCAAGTTTG...GGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp CTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAACTTTGGGTTCTATTCTaGTGTTTTAGGCTAGCAACC +
Preference number: 4 (lower is better)
Translates to: LGTKVQIRETGPTCILSQLWVLF*CFRLAT
Trigger: GGTTGCTAGCCTAAAACATCAGAATAGAACCCAAAG...TTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCGCAGATGAAACACAATaGATACAGGGCCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGADETQ*IQGLLV
Trigger: AACAAGAAGGCCCTGTATTCATTGTGTTTCATCTGC...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp GTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGGCAGATGAAACACAATaGATACAGGGCCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VLLQTVPSVECKYCTGKMADETQ*IQGLLV
Trigger: AACAAGAAGGCCCTGTATTCATTGTGTTTCATCTGC...CATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp ACAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAACATCAAAACATTCATTaGCCACCTTCCCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: TTESNLFEYLSIHPDTWEHQNIH*PPSHRP
Trigger: TGGCCTATGGGAAGGTGGTCAATGAATGTTTTGATG...TTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp TTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACACATCAAAACATTCATTaGCCACCTTCCCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGNTTQGNSCHRFQLTQTHQNIH*PPSHRP
Trigger: TGGCCTATGGGAAGGTGGTCAATGAATGTTTTGATG...TGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp ACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTAATCAACAGCCTTCTTTaGAATAGACTGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: TQGNSCHRFQLTQTDWQLINSLL*NRLSPS
Trigger: GCTTGGAGACAGTCTATTTCAAAGAAGGCTGTTGAT...TAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR TCA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAATTTGGAATCCTGCTaGGACACTCTCATGTCATTT +
Preference number: 4 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYNLESC*DTLMSF
Trigger: AAATGACATGAGAGTGTCTCAGCAGGATTCCAAATT...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp ATGAAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGTGGCGGCTACTTGATTaGTGCAGTAGCTATCATAGG +
Preference number: 4 (lower is better)
Translates to: MKKCFSKPFHLWNANTVQWRLLD*CSSYHR
Trigger: CCTATGATAGCTACTGCAGCAATCAAGTAGCCGCCA...CTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GTTGACCATTCTTATGTCTCTTTAGGGACAAGTTTACCAGTTCAGCTGCAAAACTGGCGGCTACTTGATTaGTGCAGTAGCTATCATAGG +
Preference number: 4 (lower is better)
Translates to: VDHSYVSLGTSLPVQLQNWRLLD*CSSYHR
Trigger: CCTATGATAGCTACTGCAGCAATCAAGTAGCCGCCA...GTTTTGCAGCTGAACTGGTAAACTTGTCCCTAAAGAGACATAAGAATGGTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp ATACAAATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCTTATCATTTGGTGTGTaGCTCAAGATTTCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: IQMQFDFKTVAFLFPPAALSFGV*LKISRR
Trigger: TCTCCGAGAAATCTTGAGGCACACACCAAATGATAA...GGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp ATACAAATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCCTTGGTGTTGATTTCTaGCACAATTCCCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: IQMQFDFKTVAFLFPPAALGVDF*HNSLND
Trigger: ATCATTCAGGGAATTGTGGCAGAAATCAACACCAAG...GGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp ACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAAAAGTATACTGTACAGGTAAGATaGAGGCCTGCTTCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: TKVQIRETGPTCILSQKYTVQVR*RPASRS
Trigger: ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGT...ATACTTTTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGAGTTCCATCTGTGGAATaGAAATACTGTACAGGTAAG +
Preference number: 4 (lower is better)
Translates to: LHPSRHLGNTTQGNSCHRVPSVE*KYCTGK
Trigger: CTTACCTGTACAGTATTTGCATTCCACAGATGGAAC...TCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CCATCCCAATACACAGATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATACACAGGGTAATAGTTaGCACAGATTCCAGCTTACA +
Preference number: 4 (lower is better)
Translates to: PSQYTDEFLMPYLQGRLNTQGNS*HRFQLT
Trigger: TGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT...ATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATCTGTGTATTGGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp CCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATAACACAGGGTAATAGTTaGCACAGATTCCAGCTTACA +
Preference number: 4 (lower is better)
Translates to: PAYTDRLAVTVLGTKVQITQGNS*HRFQLT
Trigger: TGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT...TATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAGATGAGTTCCTCATaGCCTATTTACAAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: TESNLFEYLSIHPDTWEIQMSSS*PIYKAV
Trigger: GACGGCCTTGTAAATAGGGCATGAGGAACTCATCTG...TATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp AGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAGCAAAGTTCAGACAATaGATCCTCCTTTGCAAAATT +
Preference number: 4 (lower is better)
Translates to: RLAVTVLGTKVQIRETGPAKFRQ*ILLCKI
Trigger: AATTTTGCAAAGGAGGATGCATTGTCTGAACTTTGC...TGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp GGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACGCTGTTTTTAAGGTCTaGACTTTACCCTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: GNSCHRFQLTQTDWQLQYAVFKV*TLPCTV
Trigger: TACAGTGCAGGGTAAAGTGCAGACCTTAAAAACAGC...GTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR GCA 90 bp CCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATAGCTGTTTTTAAGGTCTaGACTTTACCCTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: PAYTDRLAVTVLGTKVQIAVFKV*TLPCTV
Trigger: TACAGTGCAGGGTAAAGTGCAGACCTTAAAAACAGC...TATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR GCA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCGCTGTTTTTAAGGTCTaGACTTTACCCTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGAVFKV*TLPCTV
Trigger: TACAGTGCAGGGTAAAGTGCAGACCTTAAAAACAGC...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR GCA 90 bp AATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCCATTCCTCTACAGCTaGATTGATTCATTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: NTTQGNSCHRFQLTQTDWPFLYS*IDSLLW
Trigger: CCACAGCAATGAATCAATGCAGCTGTAGAGGAATGG...CCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338458.8
CDS-3UTR GCA 90 bp ACTAGTGCTGGTGTGGGTATAATTTTGCACAGGTCATCCTTAATATTTACACTTAGAATGCAACCAGGCTaGTGGGTACCTCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TSAGVGIILHRSSLIFTLRMQPG*WVPLQL
Trigger: AAGCTGGAGAGGTACCCAGCAGCCTGGTTGCATTCT...AAGTGTAAATATTAAGGATGACCTGTGCAAAATTATACCCACACCAGCACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413728.6
CDS-3UTR GCA 90 bp ACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTAGTCATTTTATGCCCCTaGCAGTCTCAGAAATCAACA +
Preference number: 4 (lower is better)
Translates to: TQGNSCHRFQLTQTDWQLVILCP*QSQKST
Trigger: TGTTGATTTCTGAGACTGGCAGGGGCATAAAATGAC...TAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp GATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGTCATTTTATGCCCCTaGCAGTCTCAGAAATCAACA +
Preference number: 4 (lower is better)
Translates to: DSSLHRQIGSYSTRDKGTVILCP*QSQKST
Trigger: TGTTGATTTCTGAGACTGGCAGGGGCATAAAATGAC...TGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp AGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCTCTCATGTCATTTTATaGCCCTGCCAGTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: STRDKGTDTRDWANMYTFSHVIL*PCQSQK
Trigger: TTTCTGAGACTGGCAGGGGCATAAAATGACATGAGA...GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp GCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGATCTCATGTCATTTTATaGCCCTGCCAGTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: AYTDRLAVTVLGTKVQIRSHVIL*PCQSQK
Trigger: TTTCTGAGACTGGCAGGGGCATAAAATGACATGAGA...TCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR CCA 90 bp ACAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAATGGAGAGTTTCAGCATaGGGTCATGATAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TTESNLFEYLSIHPDTWEWRVSA*GHDRPF
Trigger: AAAAGGCCTATCATGACCCCATGCTGAAACTCTCCA...TTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CCA 90 bp AAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGGAGAGTTTCAGCATaGGGTCATGATAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: KCFSKPFHLWNANTVQVRWRVSA*GHDRPF
Trigger: AAAAGGCCTATCATGACCCCATGCTGAAACTCTCCA...TCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp AGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCCTTGTTCTGTCATTATaGAGAGTTTCAGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: STRDKGTDTRDWANMYTFLVLSL*RVSAWG
Trigger: ACCCCATGCTGAAACTCTCCATAATGACAGAACAAG...GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp ACAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAATACCAGGCGGCTTCTTaGAATATCGAGGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: TTESNLFEYLSIHPDTWEYQAAS*NIEEIP
Trigger: TGGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTA...TTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CCA 90 bp TTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACATACCAGGCGGCTTCTTaGAATATCGAGGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: LGNTTQGNSCHRFQLTQTYQAAS*NIEEIP
Trigger: TGGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTA...TGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACATCTGGATTATCATTTaGTGTGTGCCTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: PLHPSRHLGNTTQGNSCHIWIII*CVPQDF
Trigger: GAAATCTTGAGGCACACACCAAATGATAATCCAGAT...GTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTATCTGGATTATCATTTaGTGTGTGCCTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: NANTVQVRCRPASRSAHAIWIII*CVPQDF
Trigger: GAAATCTTGAGGCACACACCAAATGATAATCCAGAT...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACCAAGTGCTGCTGATCTaGATTATCATTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: DTWEIQHRVIVATDSSLHQVLLI*IIIWCV
Trigger: CACACACCAAATGATAATCCAGATCAGCAGCACTTG...GTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp ACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACACAAGTGCTGCTGATCTaGATTATCATTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TRDKGTDTRDWANMYTFTQVLLI*IIIWCV
Trigger: CACACACCAAATGATAATCCAGATCAGCAGCACTTG...TGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACACAAGTGCTGCTGATCTaGATTATCATTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: DSSLHRQIGSYSTRDKGTQVLLI*IIIWCV
Trigger: CACACACCAAATGATAATCCAGATCAGCAGCACTTG...TGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp ATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGCAAGTGCTGCTGATCTaGATTATCATTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: IPAYTDRLAVTVLGTKVQQVLLI*IIIWCV
Trigger: CACACACCAAATGATAATCCAGATCAGCAGCACTTG...CTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp TTACCTGCTTGTTTCACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCCAAAGCTGCTCATTGTaGGTGACGGCTCGAGTGATC +
Preference number: 4 (lower is better)
Translates to: LPACFTEYHVRYSIDIAIQSCSL*VTARVI
Trigger: GATCACTCGAGCCGTCACCCACAATGAGCAGCTTTG...GATAGCAATATCTATCGAGTATCTAACATGATACTCGGTGAAACAAGCAGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp AATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGGACTCACTGTCCGATTaGTCCATCTGCTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: NTTQGNSCHRFQLTQTDWDSLSD*SICSSF
Trigger: AAAACTTGAGCAGATGGACCAATCGGACAGTGAGTC...CCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp AGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAGATACGAGAGACTaGGCCAACATGTATACTTTC +
Preference number: 4 (lower is better)
Translates to: STRDKGTDTRDWANMYTFTDTRD*ANMYTF
Trigger: GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGT...GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGACAGATACGAGAGACTaGGCCAACATGTATACTTTC +
Preference number: 4 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQTDTRD*ANMYTF
Trigger: GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGT...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGCATCAAACTTGCACTaGATGAAGTTGCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATASNLH*MKLQSS
Trigger: TGAACTTTGCAACTTCATCCAGTGCAAGTTTGATGC...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTTGTTGCTTCATTCATTTAAAGATTCAGAGCTaGCAGCCGCTTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: INSVIDRVMVSLPCCFIHLKIQS*QPLLSW
Trigger: CCAGGACAGAAGCGGCTGCCAGCTCTGAATCTTTAA...ATGAATGAAGCAACAAGGAAGAGAGACCATGACTCTATCGATGACACTGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp GATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACATCATCGATAGAGTCATaGTCTCTCTTCCTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: DSSLHRQIGSYSTRDKGTSSIES*SLFLVA
Trigger: AGCAACAAGGAAGAGAGACCATGACTCTATCGATGA...TGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CCATCCCAATACACAGATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCATCGATAGAGTCATaGTCTCTCTTCCTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PSQYTDEFLMPYLQGRLNSSIES*SLFLVA
Trigger: AGCAACAAGGAAGAGAGACCATGACTCTATCGATGA...ATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATCTGTGTATTGGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGTCATCGATAGAGTCATaGTCTCTCTTCCTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQSSIES*SLFLVA
Trigger: AGCAACAAGGAAGAGAGACCATGACTCTATCGATGA...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGAATGCTTTTCTCTCAATaGCTCCCACAGAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TWEIQHRVIVATDSSLHRMLFSQ*LPQKVL
Trigger: CAGAACCTTCTGTGGGAGCCATTGAGAGAAAAGCAT...TCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAAGCACAGAACCAGAGATaGCAAATTGACGACCCAAAA +
Preference number: 4 (lower is better)
Translates to: QLKVTCLSTSPSIQTLGKAQNQR*QIDDPK
Trigger: TTTTGGGTCGTCAATTTGCCATCTCTGGTTCTGTGC...TTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CCA 90 bp CATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCACAGCATCTTCATCTTaGGTGCTCTGTTTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: HPSRHLGNTTQGNSCHRFTASSS*VLCFRF
Trigger: AAAACGGAAACAGAGCACCCAAGATGAAGATGCTGT...GAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338458.8
ENST00000496106.5
CDS-3UTR TCA 90 bp ATACAAATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCTCTGCCACAATTCCCTaGATGATATTTATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: IQMQFDFKTVAFLFPPAASATIP*MIFIAS
Trigger: AGAAGCTATAAATATCATTCAGGGAATTGTGGCAGA...GGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR TCA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACATCTGCCACAATTCCCTaGATGATATTTATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATSATIP*MIFIAS
Trigger: AGAAGCTATAAATATCATTCAGGGAATTGTGGCAGA...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAAAAGTATTGTAGCGAGTGGGTCTaGCTTTGGGATCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: TKVQIRETGPTCILSQKYCSEWV*LWDPFL
Trigger: CAAAAATGGATCCCAAAGTCAGACCCACTCGCTACA...ATACTTTTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp TTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAACTGTTTCTTTGGCTTaGCGAATACAGTTAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LGNTTQGNSCHRFQLTQTTVSLA*RIQLSH
Trigger: GTGGCTTAACTGTATTCGTCAAGCCAAAGAAACAGT...TGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp GGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATCAAACTTGCACTGGATaGAGTTGCAAAGTTCAGACA +
Preference number: 4 (lower is better)
Translates to: GNTTQGNSCHRFQLTQTDQTCTG*SCKVQT
Trigger: TGTCTGAACTTTGCAACTTCATCCAGTGCAAGTTTG...ATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp ACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAAAAGTATCTCCTAAGCTCCATCTaGCCTGTAGTAGATGCTAGA +
Preference number: 4 (lower is better)
Translates to: TKVQIRETGPTCILSQKYLLSSI*PVVDAR
Trigger: TCTAGCATCTACTACAGGTCAGATGGAGCTTAGGAG...ATACTTTTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413728.6
CDS-3UTR TCA 90 bp ATTACTAGGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGACTTTCTCAATAGCCTaGAAAACCAGTTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ITRLTYVETAKANSIFILTFSIA*KTSCSC
Trigger: GCAGGAACAACTGGTTTTTCAGGCTATTGAGAAAGT...CAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCCTAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR GCA 90 bp ACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAAAAGTATCGGCTACTTGATTGCTaGAGTAGCTATCATAGGAGC +
Preference number: 4 (lower is better)
Translates to: TKVQIRETGPTCILSQKYRLLDC*SSYHRS
Trigger: GCTCCTATGATAGCTACTGCAGCAATCAAGTAGCCG...ATACTTTTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AGTATGAAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACGGCTACTTGATTGCTaGAGTAGCTATCATAGGAGC +
Preference number: 4 (lower is better)
Translates to: SMKKCFSKPFHLWNANTVRLLDC*SSYHRS
Trigger: GCTCCTATGATAGCTACTGCAGCAATCAAGTAGCCG...TACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTTCATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CTTGTTATCCTGGCAGGCCTTCCTAAGCCCTTTGGGTTCTATTCTGATGTTTTATTATCATTTGGTGTGTaGCTCAAGATTTCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: LVILAGLPKPFGFYSDVLLSFGV*LKISRR
Trigger: TCTCCGAGAAATCTTGAGGCACACACCAAATGATAA...TAAAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGCCTGCCAGGATAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGTTATCATTTGGTGTGTaGCTCAAGATTTCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTLSFGV*LKISRR
Trigger: TCTCCGAGAAATCTTGAGGCACACACCAAATGATAA...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCTTATCATTTGGTGTGTaGCTCAAGATTTCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: STRDKGTDTRDWANMYTFLSFGV*LKISRR
Trigger: TCTCCGAGAAATCTTGAGGCACACACCAAATGATAA...GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AGTATGAAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTATGGAACAGGAAAACATaGAGTTTCACGCCCCGATTG +
Preference number: 4 (lower is better)
Translates to: SMKKCFSKPFHLWNANTVWNRKT*SFTPRL
Trigger: CAATCGGGGCGTGAAACTGCATGTTTTCCTGTTCCA...TACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTTCATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp ATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGGTTCCATCTGTGGAATaGAAATACTGTACAGGTAAG +
Preference number: 4 (lower is better)
Translates to: IPAYTDRLAVTVLGTKVQVPSVE*KYCTGK
Trigger: CTTACCTGTACAGTATTTGCATTCCACAGATGGAAC...CTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp TACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTGTTCCATCTGTGGAATaGAAATACTGTACAGGTAAG +
Preference number: 4 (lower is better)
Translates to: YSTRDKGTDTRDWANMYTVPSVE*KYCTGK
Trigger: CTTACCTGTACAGTATTTGCATTCCACAGATGGAAC...AGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATACACAGGGTAATAGTTaGCACAGATTCCAGCTTACA +
Preference number: 4 (lower is better)
Translates to: GNTTQGNSCHRFQLTQTDTQGNS*HRFQLT
Trigger: TGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT...ATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGACACAGGGTAATAGTTaGCACAGATTCCAGCTTACA +
Preference number: 4 (lower is better)
Translates to: NTTQGNSCHRFQLTQTDWTQGNS*HRFQLT
Trigger: TGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT...CCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACTCTGAACATAGTAGGTaGCTGGAAAAATCTTTCGTG +
Preference number: 4 (lower is better)
Translates to: DTWEIQHRVIVATDSSLHSEHSR*LEKSFV
Trigger: CACGAAAGATTTTTCCAGGCACCTACTATGTTCAGA...GTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp AATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGTCTCCAGGATATTTCTaGATCCCCGTTCTGAACATA +
Preference number: 4 (lower is better)
Translates to: NTTQGNSCHRFQLTQTDWSPGYF*IPVLNI
Trigger: TATGTTCAGAACGGGGATGCAGAAATATCCTGGAGA...CCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCTTCCTTTTCAGCCATTaGTTTCAAAGTTTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGFLFSH*FQSFEG
Trigger: ACCCTCGAAACTTTGAAAGCAATGGCTGAAAAGGAA...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp ACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTTTCCTTTTCAGCCATTaGTTTCAAAGTTTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: TDSSLHRQIGSYSTRDKGFLFSH*FQSFEG
Trigger: ACCCTCGAAACTTTGAAAGCAATGGCTGAAAAGGAA...ACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR GCA 90 bp AAATTAGGCCCACTGAGTAATGTTACAGATGAATCCACATTCCAGTTGACCATTCAGGTCAACCCCGACTaGTATCCATACTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: KLGPLSNVTDESTFQLTIQVNPD*YPYFSH
Trigger: ATGAGAGAAGTATGGATAGCAGTCGGGGTTGACCTG...AATGGTCAACTGGAATGTGGATTCATCTGTAACATTACTCAGTGGGCCTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp GTTGACCATTCTTATGTCTCTTTAGGGACAAGTTTACCAGTTCAGCTGCAAAACGTTTACCAGTTCAGCTaGAAAACCCACCATAACGCA +
Preference number: 4 (lower is better)
Translates to: VDHSYVSLGTSLPVQLQNVYQFS*KTHHNA
Trigger: TGCGTTATGGTGGGTTTTGCAGCTGAACTGGTAAAC...GTTTTGCAGCTGAACTGGTAAACTTGTCCCTAAAGAGACATAAGAATGGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp GTTGACCATTCTTATGTCTCTTTAGGGACAAGTTTACCAGTTCAGCTGCAAAACTGGAGAGTTTCAGCATaGGGTCATGATAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: VDHSYVSLGTSLPVQLQNWRVSA*GHDRPF
Trigger: AAAAGGCCTATCATGACCCCATGCTGAAACTCTCCA...GTTTTGCAGCTGAACTGGTAAACTTGTCCCTAAAGAGACATAAGAATGGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp CTCTCCTGTGTTTCTATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTCTTGTTCTGTCATTATaGAGAGTTTCAGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: LSCVSINSVIDRVMVSLPLVLSL*RVSAWG
Trigger: ACCCCATGCTGAAACTCTCCATAATGACAGAACAAG...AGGAAGAGAGACCATGACTCTATCGATGACACTGTTTATAGAAACACAGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACTTGTTCTGTCATTATaGAGAGTTTCAGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: TWEIQHRVIVATDSSLHRLVLSL*RVSAWG
Trigger: ACCCCATGCTGAAACTCTCCATAATGACAGAACAAG...TCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CTTGTTATCCTGGCAGGCCTTCCTAAGCCCTTTGGGTTCTATTCTGATGTTTTAAAACCGTTCCATCTGTaGAATGCAAATACTGTACAG +
Preference number: 4 (lower is better)
Translates to: LVILAGLPKPFGFYSDVLKPFHL*NANTVQ
Trigger: CTGTACAGTATTTGCATTCCACAGATGGAACGGTTT...TAAAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGCCTGCCAGGATAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp AGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCAAACCGTTCCATCTGTaGAATGCAAATACTGTACAG +
Preference number: 4 (lower is better)
Translates to: STRDKGTDTRDWANMYTFKPFHL*NANTVQ
Trigger: CTGTACAGTATTTGCATTCCACAGATGGAACGGTTT...GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp ACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTAGTTCACTTCATGAGTTaGTCTTTCCTGATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: TQGNSCHRFQLTQTDWQLVHFMS*SFLILS
Trigger: AGAGAGAATCAGGAAAGACCAACTCATGAAGTGAAC...TAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTAGCATCAAACTTGCACTaGATGAAGTTGCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PDTWEIQHRVIVATDSSLASNLH*MKLQSS
Trigger: TGAACTTTGCAACTTCATCCAGTGCAAGTTTGATGC...TAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTGCATCAAACTTGCACTaGATGAAGTTGCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: TDSSLHRQIGSYSTRDKGASNLH*MKLQSS
Trigger: TGAACTTTGCAACTTCATCCAGTGCAAGTTTGATGC...ACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAACTGTAAATCAAGGCTaGACAAAGAGGTTACTAATC +
Preference number: 4 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATTVNQG*TKRLLI
Trigger: GATTAGTAACCTCTTTGTCCAGCCTTGATTTACAGT...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CCA 90 bp TTGACCCGTTTATTACTAGGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCAATTCTCAGTTTGTTCTaGAATCTTAGGAGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LTRLLLGSLMSRLQRLTAILSLF*NLRSRR
Trigger: CCTTCGACTCCTAAGATTCCAGAACAAACTGAGAAT...TGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCCTAGTAATAAACGGGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR TCA 90 bp AAATTAGGCCCACTGAGTAATGTTACAGATGAATCCACATTCCAGTTGACCATTTTGGATGTAAGCATCTaGTTGACGCACACATCGAAG +
Preference number: 4 (lower is better)
Translates to: KLGPLSNVTDESTFQLTILDVSI*LTHTSK
Trigger: CTTCGATGTGTGCGTCAATCAGATGCTTACATCCAA...AATGGTCAACTGGAATGTGGATTCATCTGTAACATTACTCAGTGGGCCTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR TCA 90 bp GACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACTCTGCCACAATTCCCTaGATGATATTTATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: DTWEIQHRVIVATDSSLHSATIP*MIFIAS
Trigger: AGAAGCTATAAATATCATTCAGGGAATTGTGGCAGA...GTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTTCTGCCACAATTCCCTaGATGATATTTATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TDSSLHRQIGSYSTRDKGSATIP*MIFIAS
Trigger: AGAAGCTATAAATATCATTCAGGGAATTGTGGCAGA...ACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ATCAAAACATTCATTGACCACCTTCCCATAGGCCAACACTTGACAAACCTCTTTCTTTGGGTTCTATTCTaGTGTTTTAGGCTAGCAACC +
Preference number: 4 (lower is better)
Translates to: IKTFIDHLPIGQHLTNLFLWVLF*CFRLAT
Trigger: GGTTGCTAGCCTAAAACATCAGAATAGAACCCAAAG...AAAGAGGTTTGTCAAGTGTTGGCCTATGGGAAGGTGGTCAATGAATGTTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR TCA 90 bp AAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAATGAATCTCCCAAGATaGAAGCCATTGCGTGACAAT +
Preference number: 4 (lower is better)
Translates to: KKCFSKPFHLWNANTVQVMNLPR*KPLRDN
Trigger: ATTGTCACGCAATGGCTTTCATCTTGGGAGATTCAT...TACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413728.6
CDS-3UTR TCA 90 bp ACAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAAATTTGGAATCCTGCTaGGACACTCTCATGTCATTT +
Preference number: 4 (lower is better)
Translates to: TTESNLFEYLSIHPDTWENLESC*DTLMSF
Trigger: AAATGACATGAGAGTGTCTCAGCAGGATTCCAAATT...TTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413728.6
CDS-3UTR TCA 90 bp ACAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAATGGAAAAATCTTTCGTaGATTTGGAATCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TTESNLFEYLSIHPDTWEWKNLS*IWNPAE
Trigger: CTCAGCAGGATTCCAAATTCACGAAAGATTTTTCCA...TTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413728.6
CDS-3UTR TCA 90 bp CCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATAATGCTAGACAGCACATaGAGATACCAAATTTTGATG +
Preference number: 4 (lower is better)
Translates to: PAYTDRLAVTVLGTKVQIMLDST*RYQILM
Trigger: CATCAAAATTTGGTATCTTCATGTGCTGTCTAGCAT...TATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413728.6
CDS-3UTR TCA 90 bp GTTGACCATTCTTATGTCTCTTTAGGGACAAGTTTACCAGTTCAGCTGCAAAACTTGGAGATGAGAAACTaGGAATCACAGGGACTAAAC +
Preference number: 4 (lower is better)
Translates to: VDHSYVSLGTSLPVQLQNLEMRN*ESQGLN
Trigger: GTTTAGTCCCTGTGATTCTCAGTTTCTCATCTCCAA...GTTTTGCAGCTGAACTGGTAAACTTGTCCCTAAAGAGACATAAGAATGGTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp TTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACACTTGGTGTTGATTTCTaGCACAATTCCCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: LGNTTQGNSCHRFQLTQTLGVDF*HNSLND
Trigger: ATCATTCAGGGAATTGTGGCAGAAATCAACACCAAG...TGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CTCTCCTGTGTTTCTATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTGTTCCATCTGTGGAATaGAAATACTGTACAGGTAAG +
Preference number: 4 (lower is better)
Translates to: LSCVSINSVIDRVMVSLPVPSVE*KYCTGK
Trigger: CTTACCTGTACAGTATTTGCATTCCACAGATGGAAC...AGGAAGAGAGACCATGACTCTATCGATGACACTGTTTATAGAAACACAGGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGGCAAAGTTCAGACAATaGATCCTCCTTTGCAAAATT +
Preference number: 4 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTAKFRQ*ILLCKI
Trigger: AATTTTGCAAAGGAGGATGCATTGTCTGAACTTTGC...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp CCATCCCAATACACAGATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATGCAAAGTTCAGACAATaGATCCTCCTTTGCAAAATT +
Preference number: 4 (lower is better)
Translates to: PSQYTDEFLMPYLQGRLNAKFRQ*ILLCKI
Trigger: AATTTTGCAAAGGAGGATGCATTGTCTGAACTTTGC...ATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATCTGTGTATTGGGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGTCCTAATACATTCTTaGATCAAACTTGCACTGGAT +
Preference number: 4 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQVLIHS*IKLALD
Trigger: ATCCAGTGCAAGTTTGATGCAAGAATGTATTAGGAC...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp CCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATAGTCCTAATACATTCTTaGATCAAACTTGCACTGGAT +
Preference number: 4 (lower is better)
Translates to: PAYTDRLAVTVLGTKVQIVLIHS*IKLALD
Trigger: ATCCAGTGCAAGTTTGATGCAAGAATGTATTAGGAC...TATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp AGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCGTCCTAATACATTCTTaGATCAAACTTGCACTGGAT +
Preference number: 4 (lower is better)
Translates to: STRDKGTDTRDWANMYTFVLIHS*IKLALD
Trigger: ATCCAGTGCAAGTTTGATGCAAGAATGTATTAGGAC...GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp CATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCGTCCTAATACATTCTTaGATCAAACTTGCACTGGAT +
Preference number: 4 (lower is better)
Translates to: HPSRHLGNTTQGNSCHRFVLIHS*IKLALD
Trigger: ATCCAGTGCAAGTTTGATGCAAGAATGTATTAGGAC...GAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR GCA 90 bp AAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTATGCAGCAGGTTCACTTaGTGTATCAATAACGACTTG +
Preference number: 4 (lower is better)
Translates to: KKCFSKPFHLWNANTVQVCSRFT*CINNDL
Trigger: CAAGTCGTTATTGATACAGCAAGTGAACCTGCTGCA...TACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR GCA 90 bp ATGAAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGCTGCATTGATTCATTaGTGTGGAACTGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: MKKCFSKPFHLWNANTVQAALIH*CGTVHR
Trigger: TCTATGGACAGTTCCACAGCAATGAATCAATGCAGC...CTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338458.8
CDS-3UTR GCA 90 bp ATGAAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGTCTCCAGGATATTTCTaGATCCCCGTTCTGAACATA +
Preference number: 4 (lower is better)
Translates to: MKKCFSKPFHLWNANTVQSPGYF*IPVLNI
Trigger: TATGTTCAGAACGGGGATGCAGAAATATCCTGGAGA...CTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR CCA 90 bp GATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAATCTGGATTATCATTTaGTGTGTGCCTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: DSSLHRQIGSYSTRDKGTIWIII*CVPQDF
Trigger: GAAATCTTGAGGCACACACCAAATGATAATCCAGAT...TGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACATCTGGATTATCATTTaGTGTGTGCCTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: GNSCHRFQLTQTDWQLQYIWIII*CVPQDF
Trigger: GAAATCTTGAGGCACACACCAAATGATAATCCAGAT...GTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp ATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCATCTGGATTATCATTTaGTGTGTGCCTCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: IHPDTWEIQHRVIVATDSIWIII*CVPQDF
Trigger: GAAATCTTGAGGCACACACCAAATGATAATCCAGAT...GGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp GTTGACCATTCTTATGTCTCTTTAGGGACAAGTTTACCAGTTCAGCTGCAAAACCAAGTGCTGCTGATCTaGATTATCATTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VDHSYVSLGTSLPVQLQNQVLLI*IIIWCV
Trigger: CACACACCAAATGATAATCCAGATCAGCAGCACTTG...GTTTTGCAGCTGAACTGGTAAACTTGTCCCTAAAGAGACATAAGAATGGTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp GGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATAAACCGTTCCATCTGTaGAATGCAAATACTGTACAG +
Preference number: 4 (lower is better)
Translates to: GNTTQGNSCHRFQLTQTDKPFHL*NANTVQ
Trigger: CTGTACAGTATTTGCATTCCACAGATGGAACGGTTT...ATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp AAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGAAAACCGTTCCATCTGTaGAATGCAAATACTGTACAG +
Preference number: 4 (lower is better)
Translates to: KCFSKPFHLWNANTVQVRKPFHL*NANTVQ
Trigger: CTGTACAGTATTTGCATTCCACAGATGGAACGGTTT...TCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp CTCTCCTGTGTTTCTATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTGTTCACTTCATGAGTTaGTCTTTCCTGATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LSCVSINSVIDRVMVSLPVHFMS*SFLILS
Trigger: AGAGAGAATCAGGAAAGACCAACTCATGAAGTGAAC...AGGAAGAGAGACCATGACTCTATCGATGACACTGTTTATAGAAACACAGGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp TTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAACTGTAAATCAAGGCTaGACAAAGAGGTTACTAATC +
Preference number: 4 (lower is better)
Translates to: LFEYLSIHPDTWEIQHRVTVNQG*TKRLLI
Trigger: GATTAGTAACCTCTTTGTCCAGCCTTGATTTACAGT...TACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CCA 90 bp GCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGAACTGTAAATCAAGGCTaGACAAAGAGGTTACTAATC +
Preference number: 4 (lower is better)
Translates to: AYTDRLAVTVLGTKVQIRTVNQG*TKRLLI
Trigger: GATTAGTAACCTCTTTGTCCAGCCTTGATTTACAGT...TCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CCA 90 bp AAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAATAAAGGCTGTTCTTaGCTTTCCTCTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: KKCFSKPFHLWNANTVQVNKGCS*LSSASV
Trigger: GACAGAAGCAGAGGAAAGCCAAGAACAGCCTTTATT...TACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CCA 90 bp CAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAACAAAGTAGCCAATTGTaGTGGCAAACCTCAATCATT +
Preference number: 4 (lower is better)
Translates to: QLKVTCLSTSPSIQTLGKQSSQL*WQTSII
Trigger: AATGATTGAGGTTTGCCACCACAATTGGCTACTTTG...TTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413728.6
CDS-3UTR CCA 90 bp TTGACCCGTTTATTACTAGGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCAGAGCCAATACTGAGTTaGTTCTCTTTACATGAAGTA +
Preference number: 4 (lower is better)
Translates to: LTRLLLGSLMSRLQRLTAEPILS*FSLHEV
Trigger: TACTTCATGTAAAGAGAACCAACTCAGTATTGGCTC...TGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCCTAGTAATAAACGGGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486829.1
CDS-3UTR TCA 90 bp TTACCTGCTTGTTTCACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCTCAAAGATCGCCTCCTaGCGTTTGATTTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LPACFTEYHVRYSIDIAISKIAS*RLISLD
Trigger: ATCCAAGGAAATCAAACGTCAGGAGGCGATCTTTGA...GATAGCAATATCTATCGAGTATCTAACATGATACTCGGTGAAACAAGCAGGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR TCA 90 bp AAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATCTGCCACAATTCCCTaGATGATATTTATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KCFSKPFHLWNANTVQVRSATIP*MIFIAS
Trigger: AGAAGCTATAAATATCATTCAGGGAATTGTGGCAGA...TCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCTTGGCTTCTTTTAGTCACCAGTCTTGGTGTTaGTTTCTGCCACAATTCCCT +
Preference number: 4 (lower is better)
Translates to: TEYHVRYSIDIAILASFSHQSWC*FLPQFP
Trigger: AGGGAATTGTGGCAGAAATCAACACCAAGACTGGTG...ACTAAAAGAAGCCAAGATAGCAATATCTATCGAGTATCTAACATGATACTCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR TCA 90 bp ACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAAAAGTATACTGTTTCTTTGGCTTaGCGAATACAGTTAAGCCAC +
Preference number: 4 (lower is better)
Translates to: TKVQIRETGPTCILSQKYTVSLA*RIQLSH
Trigger: GTGGCTTAACTGTATTCGTCAAGCCAAAGAAACAGT...ATACTTTTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR TCA 90 bp ATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTTGTTGCTTCATTCATCTTTGGGTTCTATTCTaGTGTTTTAGGCTAGCAACC +
Preference number: 4 (lower is better)
Translates to: INSVIDRVMVSLPCCFIHLWVLF*CFRLAT
Trigger: GGTTGCTAGCCTAAAACATCAGAATAGAACCCAAAG...ATGAATGAAGCAACAAGGAAGAGAGACCATGACTCTATCGATGACACTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR TCA 90 bp GTTGACCATTCTTATGTCTCTTTAGGGACAAGTTTACCAGTTCAGCTGCAAAACTTTCCATTTTGGAGATaGGAAACTGAGAATCACAGG +
Preference number: 4 (lower is better)
Translates to: VDHSYVSLGTSLPVQLQNFPFWR*ETENHR
Trigger: CCTGTGATTCTCAGTTTCTCATCTCCAAAATGGAAA...GTTTTGCAGCTGAACTGGTAAACTTGTCCCTAAAGAGACATAAGAATGGTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp ACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCTTGGCTTCTTTTAGTTGGAACAGGAAAACATaGAGTTTCACGCCCCGATTG +
Preference number: 4 (lower is better)
Translates to: TEYHVRYSIDIAILASFSWNRKT*SFTPRL
Trigger: CAATCGGGGCGTGAAACTGCATGTTTTCCTGTTCCA...ACTAAAAGAAGCCAAGATAGCAATATCTATCGAGTATCTAACATGATACTCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp AAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAGTTCCATCTGTGGAATaGAAATACTGTACAGGTAAG +
Preference number: 4 (lower is better)
Translates to: KKCFSKPFHLWNANTVQVVPSVE*KYCTGK
Trigger: CTTACCTGTACAGTATTTGCATTCCACAGATGGAAC...TACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp GTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGAAAAGTATGAAAAAGTaGTTCTCCAAACCGTTCCAT +
Preference number: 4 (lower is better)
Translates to: VLLQTVPSVECKYCTGKMKSMKK*FSKPFH
Trigger: ATGGAACGGTTTGGAGAAGCACTTTTTCATACTTTT...CATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp CCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATAAAAAGTATGAAAAAGTaGTTCTCCAAACCGTTCCAT +
Preference number: 4 (lower is better)
Translates to: PAYTDRLAVTVLGTKVQIKSMKK*FSKPFH
Trigger: ATGGAACGGTTTGGAGAAGCACTTTTTCATACTTTT...TATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp TTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAAAAAGTATGAAAAAGTaGTTCTCCAAACCGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LFEYLSIHPDTWEIQHRVKSMKK*FSKPFH
Trigger: ATGGAACGGTTTGGAGAAGCACTTTTTCATACTTTT...TACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR GCA 90 bp TTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGCAAAGTTCAGACAATaGATCCTCCTTTGCAAAATT +
Preference number: 4 (lower is better)
Translates to: LGNTTQGNSCHRFQLTQTAKFRQ*ILLCKI
Trigger: AATTTTGCAAAGGAGGATGCATTGTCTGAACTTTGC...TGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CCA 90 bp ACTAGTGCTGGTGTGGGTATAATTTTGCACAGGTCATCCTTAATATTTACACTTAAGTCTTCTTCTCCTTaGGAAAGCTCAAAGATCGCC +
Preference number: 4 (lower is better)
Translates to: TSAGVGIILHRSSLIFTLKSSSP*ESSKIA
Trigger: GGCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTT...AAGTGTAAATATTAAGGATGACCTGTGCAAAATTATACCCACACCAGCACTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CCA 90 bp ATCAAAACATTCATTGACCACCTTCCCATAGGCCAACACTTGACAAACCTCTTTAAACCGTTCCATCTGTaGAATGCAAATACTGTACAG +
Preference number: 4 (lower is better)
Translates to: IKTFIDHLPIGQHLTNLFKPFHL*NANTVQ
Trigger: CTGTACAGTATTTGCATTCCACAGATGGAACGGTTT...AAAGAGGTTTGTCAAGTGTTGGCCTATGGGAAGGTGGTCAATGAATGTTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR GCA 90 bp ACTGTAAATCAAGGCTGGACAAAGAGGTTACTAATCTGGCTAGCTGATTCTAATCTTGGTGTTGATTTCTaGCACAATTCCCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: TVNQGWTKRLLIWLADSNLGVDF*HNSLND
Trigger: ATCATTCAGGGAATTGTGGCAGAAATCAACACCAAG...ATTAGAATCAGCTAGCCAGATTAGTAACCTCTTTGTCCAGCCTTGATTTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR GCA 90 bp ACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAAAAGTATCTTGGTGTTGATTTCTaGCACAATTCCCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: TKVQIRETGPTCILSQKYLGVDF*HNSLND
Trigger: ATCATTCAGGGAATTGTGGCAGAAATCAACACCAAG...ATACTTTTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CCA 90 bp ACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCTTGGCTTCTTTTAGTAAGTCTTCTTCTCCTTaGGAAAGCTCAAAGATCGCC +
Preference number: 4 (lower is better)
Translates to: TEYHVRYSIDIAILASFSKSSSP*ESSKIA
Trigger: GGCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTT...ACTAAAAGAAGCCAAGATAGCAATATCTATCGAGTATCTAACATGATACTCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CCA 90 bp ACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCTTGGCTTCTTTTAGTTACCAGGCGGCTTCTTaGAATATCGAGGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: TEYHVRYSIDIAILASFSYQAAS*NIEEIP
Trigger: TGGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTA...ACTAAAAGAAGCCAAGATAGCAATATCTATCGAGTATCTAACATGATACTCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
3UTR CAA 72 bp AGAATAATTACCACTAGTGCTGGTGTGGGTATAATTTaGCACAGGTCATCCTTAATATTTACACTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RIITTSAGVGII*HRSSLIFTLAG
Trigger: CCCTGCAAGTGTAAATATTAAGGATGACCTGTGCAAAATTATACCCACACCAGCACTAGTGGTAATTATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR GCA 90 bp ATGAAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGAAAAGTATGAAAAAGTaGTTCTCCAAACCGTTCCAT +
Preference number: 4 (lower is better)
Translates to: MKKCFSKPFHLWNANTVQKSMKK*FSKPFH
Trigger: ATGGAACGGTTTGGAGAAGCACTTTTTCATACTTTT...CTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR GCA 90 bp AAATTAGGCCCACTGAGTAATGTTACAGATGAATCCACATTCCAGTTGACCATTGAAATAGCATACAAATaGAGTTTGACTTCAAGACCG +
Preference number: 4 (lower is better)
Translates to: KLGPLSNVTDESTFQLTIEIAYK*SLTSRP
Trigger: CGGTCTTGAAGTCAAACTGCATTTGTATGCTATTTC...AATGGTCAACTGGAATGTGGATTCATCTGTAACATTACTCAGTGGGCCTAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp ACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCTTGGCTTCTTTTAGTGGAGCACTAACTATGTaGAGACAGTTTCACTTAGAT +
Preference number: 4 (lower is better)
Translates to: TEYHVRYSIDIAILASFSGALTM*RQFHLD
Trigger: ATCTAAGTGAAACTGTCTGCACATAGTTAGTGCTCC...ACTAAAAGAAGCCAAGATAGCAATATCTATCGAGTATCTAACATGATACTCGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR TCA 90 bp ACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCTTGGCTTCTTTTAGTAATCCACATTCCAGTTaGCCATTCTTATGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: TEYHVRYSIDIAILASFSNPHSS*PFLCLF
Trigger: AAAGAGACATAAGAATGGTCAACTGGAATGTGGATT...ACTAAAAGAAGCCAAGATAGCAATATCTATCGAGTATCTAACATGATACTCGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR GCA 90 bp ACTAGTGCTGGTGTGGGTATAATTTTGCACAGGTCATCCTTAATATTTACACTTAAAAGTATGAAAAAGTaGTTCTCCAAACCGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TSAGVGIILHRSSLIFTLKSMKK*FSKPFH
Trigger: ATGGAACGGTTTGGAGAAGCACTTTTTCATACTTTT...AAGTGTAAATATTAAGGATGACCTGTGCAAAATTATACCCACACCAGCACTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS GCA 90 bp CCTGGTGTCCTATCTCGGGATTTTCTGGCTGCTCGGTTTACAAGATaGAGCCGCCGGGACAAGGGCCTCAGGCAGGCTGGGACGGCGCCC +
Preference number: 5 (lower is better)
Translates to: PGVLSRDFLAARFTR*SRRDKGLRQAGTAP
Trigger: GGGCGCCGTCCCAGCCTGCCTGAGGCCCTTGTCCCGGCGGCTGCATCTTGTAAACCGAGCAGCCAGAAAATCCCGAGATAGGACACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477440.6
CDS CCA 90 bp AGGCCCGTCTCTGGCTGCGAGGCACCCACGCTGACCTTAACCCCTTaGCGTCCTCCACCCTGGTGTCCTATCTCGGGATTTTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: RPVSGCEAPTLTLTP*RPPPWCPISGFSGC
Trigger: GCAGCCAGAAAATCCCGAGATAGGACACCAGGGTGGAGGACGCCAAGGGGTTAAGGTCAGCGTGGGTGCCTCGCAGCCAGAGACGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477440.6
CDS-3UTR CAA 90 bp TTTCCACCAGCTGCCCACTCCCTCCAAACTACCACGGCCAAAAACATTCAACAGGGCTCCTCAGCGTCCTaGGCCGGACCGCTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: FPPAAHSLQTTTAKNIQQGSSAS*AGPLAG
Trigger: CCCGGCCAGCGGTCCGGCCAAGGACGCTGAGGAGCC...CTGTTGAATGTTTTTGGCCGTGGTAGTTTGGAGGGAGTGGGCAGCTGGTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS GCA 90 bp CCTTGGCGTCCTCCACCCTGGTGTCCTATCTCGGGATTTTCTGGCTaGTCGGTTTACAAGATGCAGCCGCCGGGACAAGGGCCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: PWRPPPWCPISGFSG*SVYKMQPPGQGPQA
Trigger: TGCCTGAGGCCCTTGTCCCGGCGGCTGCATCTTGTAAACCGAGCAGCCAGAAAATCCCGAGATAGGACACCAGGGTGGAGGACGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477440.6
CDS CCA 90 bp GTTTCCGTTTTCGCTGCGAACGGACAAAGAGGCAGCACCACACCATaGGGCGCTCTGACCTCATCCACCCGGACTCACCGGCTCCTAACT +
Preference number: 5 (lower is better)
Translates to: VSVFAANGQRGSTTP*GALTSSTRTHRLLT
Trigger: AGTTAGGAGCCGGTGAGTCCGGGTGGATGAGGTCAGAGCGCCCCATGGTGTGGTGCTGCCTCTTTGTCCGTTCGCAGCGAAAACGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496106.5
CDS CCA 90 bp TGCGAGGCACCCACGCTGACCTTAACCCCTTGGCGTCCTCCACCCTaGTGTCCTATCTCGGGATTTTCTGGCTGCTCGGTTTACAAGATG +
Preference number: 5 (lower is better)
Translates to: CEAPTLTLTPWRPPP*CPISGFSGCSVYKM
Trigger: CATCTTGTAAACCGAGCAGCCAGAAAATCCCGAGATAGGACACCAGGGTGGAGGACGCCAAGGGGTTAAGGTCAGCGTGGGTGCCTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477440.6
CDS-3UTR CAA 90 bp CATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCGGCTCCTCAGCGTCCTaGGCCGGACCGCTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: HPSRHLGNTTQGNSCHRFGSSAS*AGPLAG
Trigger: CCCGGCCAGCGGTCCGGCCAAGGACGCTGAGGAGCC...GAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS-3UTR CAA 90 bp CTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACGGCTCCTCAGCGTCCTaGGCCGGACCGCTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: LKVTCLSTSPSIQTLGKYGSSAS*AGPLAG
Trigger: CCCGGCCAGCGGTCCGGCCAAGGACGCTGAGGAGCC...GTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296315.8
ENST00000465659.5
CDS TCA 90 bp CCAGCTAATTGGCAAACCGCAGTACAGACCAGGCGTACTTGTCCCTaGGTCTCTTTGATAAAGCTAGTGTGTGCCACTGGCCCAGGGCGC +
Preference number: 5 (lower is better)
Translates to: PANWQTAVQTRRTCP*VSLIKLVCATGPGR
Trigger: GCGCCCTGGGCCAGTGGCACACACTAGCTTTATCAAAGAGACTCAGGGACAAGTACGCCTGGTCTGTACTGCGGTTTGCCAATTAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498517.5
CDS-3UTR CAA 90 bp TGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGTCAAGCACCCCAGCTaGCCCGGCAGCACACAAAAC +
Preference number: 5 (lower is better)
Translates to: WNANTVQVRCRPASRSAHVKHPS*PGSTQN
Trigger: GTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGAC...ATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTGTCAAGCACCCCAGCTaGCCCGGCAGCACACAAAAC +
Preference number: 5 (lower is better)
Translates to: NANTVQVRCRPASRSAHAVKHPS*PGSTQN
Trigger: GTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGAC...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp TTTCCACCAGCTGCCCACTCCCTCCAAACTACCACGGCCAAAAACATTCAACAGCTGGACTCGGTGATCTaGCTTTTTGTGGTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: FPPAAHSLQTTTAKNIQQLDSVI*LFVVQQ
Trigger: CTGCTGGACCACAAAAAGCAAGATCACCGAGTCCAG...CTGTTGAATGTTTTTGGCCGTGGTAGTTTGGAGGGAGTGGGCAGCTGGTGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CAA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGTCAAGCACCCCAGCTaGCCCGGCAGCACACAAAAC +
Preference number: 5 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATVKHPS*PGSTQN
Trigger: GTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGAC...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS CCA 90 bp GGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTaGGTGCTCTGTTTCCGTTTTCGCTGCGAACGGACAAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: GSLMSRLQRLTASSS*VLCFRFRCERTKRQ
Trigger: CTGCCTCTTTGTCCGTTCGCAGCGAAAACGGAAACAGAGCACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496106.5
CDS-3UTR CAA 90 bp GCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTCTGTCTCACTCCACAGCTaGCTATCTCTCCGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: ANTVQVRCRPASRSAHASVSLHS*LSLRFV
Trigger: CACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGAC...AGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGGTGCTCGTCTCACTCCACAGCTaGCTATCTCTCCGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: GSLMSRLQRLTASSSWVLVSLHS*LSLRFV
Trigger: CACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGAC...GAGCACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR CAA 90 bp GTTAAAGATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCTTCCAGAGATCTAGTTaGCGGCTAAAGGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: VKDSELAAASVLALLRSAFQRSS*RLKGDS
Trigger: AGAATCCCCCTTTAGCCGCAAACTAGATCTCTGGAA...GGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATCTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp GATTCAGAGCTGGCAGCCGCTTCTGTCCTGGCCCTTTTAAGGTCAGCCTCTATTTCACCAGTCTTGGTGTaGATTTCTGCCACAATTCCC +
Preference number: 5 (lower is better)
Translates to: DSELAAASVLALLRSASISPVLV*ISATIP
Trigger: GGGAATTGTGGCAGAAATCAACACCAAGACTGGTGA...AATAGAGGCTGACCTTAAAAGGGCCAGGACAGAAGCGGCTGCCAGCTCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp GCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTCTGAATACAGGGCCTTCTaGTTATCCTGGCAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: ANTVQVRCRPASRSAHASEYRAF*LSWQAF
Trigger: GAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTC...AGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp ACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCGTCTCACTCCACAGCTaGCTATCTCTCCGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: TVPSVECKYCTGKMQACFVSLHS*LSLRFV
Trigger: CACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGAC...GAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGAGCTTTGGCGGCTACTaGATTGCTGCAGTAGCTATC +
Preference number: 5 (lower is better)
Translates to: PSVECKYCTGKMQACFPKSFGGY*IAAVAI
Trigger: GATAGCTACTGCAGCAATCAAGTAGCCGCCAAAGCT...CTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAGCTTTGGCGGCTACTaGATTGCTGCAGTAGCTATC +
Preference number: 5 (lower is better)
Translates to: VPSVECKYCTGKMQACFPSFGGY*IAAVAI
Trigger: GATAGCTACTGCAGCAATCAAGTAGCCGCCAAAGCT...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GGCTTTCCTCTGCTTCTGTCTGCAGCAGGTTCACTTGCTGTATCAATAACGACTCTGGACTCGGTGATCTaGCTTTTTGTGGTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: GFPLLLSAAGSLAVSITTLDSVI*LFVVQQ
Trigger: CTGCTGGACCACAAAAAGCAAGATCACCGAGTCCAG...AGTCGTTATTGATACAGCAAGTGAACCTGCTGCAGACAGAAGCAGAGGAAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CAA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGGGTCTTTCACGGGGATaGGCTGACGGTACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTGLSRG*ADGTAG
Trigger: ACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGACC...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCGGTCTTTCACGGGGATaGGCTGACGGTACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGGLSRG*ADGTAG
Trigger: ACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGACC...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAGGTCTTTCACGGGGATaGGCTGACGGTACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: TRDKGTDTRDWANMYTFTGLSRG*ADGTAG
Trigger: ACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGACC...TGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp TTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGTCAAGCACCCCAGCTaGCCCGGCAGCACACAAAAC +
Preference number: 5 (lower is better)
Translates to: LGNTTQGNSCHRFQLTQTVKHPS*PGSTQN
Trigger: GTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGAC...TGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp TCGGAGTCAAGCACCCCAGCTTGCCCGGCAGCACACAAAACTGTTTCTTTGGCTTTGCACTGGATGAAGTaGCAAAGTTCAGACAATGCA +
Preference number: 5 (lower is better)
Translates to: SESSTPACPAAHKTVSLALHWMK*QSSDNA
Trigger: TGCATTGTCTGAACTTTGCAACTTCATCCAGTGCAA...AGCCAAAGAAACAGTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGACTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR CAA 90 bp GGCTTTCCTCTGCTTCTGTCTGCAGCAGGTTCACTTGCTGTATCAATAACGACTGAATACAGGGCCTTCTaGTTATCCTGGCAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: GFPLLLSAAGSLAVSITTEYRAF*LSWQAF
Trigger: GAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTC...AGTCGTTATTGATACAGCAAGTGAACCTGCTGCAGACAGAAGCAGAGGAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CAA 90 bp GGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGGTGCTCCATGGGAAAGTTGTTTaGCCGCTGCCGTTTAGGCAT +
Preference number: 5 (lower is better)
Translates to: GSLMSRLQRLTASSSWVLHGKVV*PLPFRH
Trigger: ATGCCTAAACGGCAGCGGCAAAACAACTTTCCCATG...GAGCACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR CAA 90 bp ACCCGTTTATTACTAGGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTGCAAGCCCCATTCTCTaGGGCCCCTCACTAACTCTC +
Preference number: 5 (lower is better)
Translates to: TRLLLGSLMSRLQRLTASASPIL*GPSLTL
Trigger: GAGAGTTAGTGAGGGGCCCAAGAGAATGGGGCTTGC...AGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCCTAGTAATAAACGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486829.1
CDS TCA 90 bp GGAGCAGGAGTCAGTAGTCAACAGGACAACACACCTCTGTCCTCTTaGATCCTACATTCTCCTTGGTGGATGCACACAATAAACCTCGAC +
Preference number: 5 (lower is better)
Translates to: GAGVSSQQDNTPLSS*ILHSPWWMHTINLD
Trigger: GTCGAGGTTTATTGTGTGCATCCACCAAGGAGAATGTAGGATTCAAGAGGACAGAGGTGTGTTGTCCTGTTGACTACTGACTCCTGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468466.1
CDS-3UTR CAA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTCTGGACTCGGTGATCTaGCTTTTTGTGGTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLALDSVI*LFVVQQ
Trigger: CTGCTGGACCACAAAAAGCAAGATCACCGAGTCCAG...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCTCACCAGTCTTGGTGTaGATTTCTGCCACAATTCCC +
Preference number: 5 (lower is better)
Translates to: SVECKYCTGKMQACFPKCSPVLV*ISATIP
Trigger: GGGAATTGTGGCAGAAATCAACACCAAGACTGGTGA...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCCACTCCGATCACAAGCACTTCTaGGAACAGGAAAACATGCAG +
Preference number: 5 (lower is better)
Translates to: MQFDFKTVAFLFPPAAHSDHKHF*EQENMQ
Trigger: CTGCATGTTTTCCTGTTCCAAGAAGTGCTTGTGATC...GGAGTGGGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CAA 90 bp AATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGGGTCTTTCACGGGGATaGGCTGACGGTACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: NTTQGNSCHRFQLTQTDWGLSRG*ADGTAG
Trigger: ACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGACC...CCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAAGGTCTTTCACGGGGATaGGCTGACGGTACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: QLKVTCLSTSPSIQTLGKGLSRG*ADGTAG
Trigger: ACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGACC...TTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp GACTCGGTGATCTTGCTTTTTGTGGTCCAGCAGAGCTTTGGCGGCTACTTGATTTTAATTCTCTCATTGTaGCTGAATGCCCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: DSVILLFVVQQSFGGYLILILSL*LNAPRR
Trigger: CCTGCGAGGGGCATTCAGCAACAATGAGAGAATTAA...AATCAAGTAGCCGCCAAAGCTCTGCTGGACCACAAAAAGCAAGATCACCGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR CAA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCCCCATAGGCCAACACTaGACAAACCTCTTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: SVECKYCTGKMQACFPKCPIGQH*TNLFSQ
Trigger: TTGGGAAAAGAGGTTTGTCAAGTGTTGGCCTATGGG...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CAA 90 bp GTGACTCGGGAAAGGGGTTTGACCCGTTTATTACTAGGCTCACTTATGTCGAGACAGTTGTTCCTGCCATaGATTGCGCTGGTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: VTRERGLTRLLLGSLMSRQLFLP*IALVPE
Trigger: TTCTGGAACCAGCGCAATCAATGGCAGGAACAACTG...TCTCGACATAAGTGAGCCTAGTAATAAACGGGTCAAACCCCTTTCCCGAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR CAA 90 bp AGACTGCAAAGGCTAACAGCATCTTCATCTTGGGTGCTCTGTTTCCGTTTTCGCCATGGGAAAGTTGTTTaGCCGCTGCCGTTTAGGCTA +
Preference number: 5 (lower is better)
Translates to: RLQRLTASSSWVLCFRFRHGKVV*PLPFRL
Trigger: TAGCCTAAACGGCAGCGGCAAAACAACTTTCCCATG...GCGAAAACGGAAACAGAGCACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486829.1
CDS-3UTR CAA 90 bp GTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATAGTCTCACTCCACAGCTaGCTATCTCTCCGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: VTVLGTKVQIRETGPTCIVSLHS*LSLRFV
Trigger: CACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGAC...TATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp AGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCACAAGTCTTCTTCTCCTaGGGAAAGCTCAAAGATCGC +
Preference number: 5 (lower is better)
Translates to: RLAVTVLGTKVQIRETGPQVFFS*GKLKDR
Trigger: GCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTTG...TGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp TGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATCAAGTCTTCTTCTCCTaGGGAAAGCTCAAAGATCGC +
Preference number: 5 (lower is better)
Translates to: WNANTVQVRCRPASRSAHQVFFS*GKLKDR
Trigger: GCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTTG...ATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CCATCCCAATACACAGATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATCTGGACTCGGTGATCTaGCTTTTTGTGGTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: PSQYTDEFLMPYLQGRLNLDSVI*LFVVQQ
Trigger: CTGCTGGACCACAAAAAGCAAGATCACCGAGTCCAG...ATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATCTGTGTATTGGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp TTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTACTGGACTCGGTGATCTaGCTTTTTGTGGTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: LFEYLSIHPDTWEIQHRVLDSVI*LFVVQQ
Trigger: CTGCTGGACCACAAAAAGCAAGATCACCGAGTCCAG...TACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp AGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCCTGGACTCGGTGATCTaGCTTTTTGTGGTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: STRDKGTDTRDWANMYTFLDSVI*LFVVQQ
Trigger: CTGCTGGACCACAAAAAGCAAGATCACCGAGTCCAG...GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACTTCCAGAGATCTAGTTaGCGGCTAAAGGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: PLHPSRHLGNTTQGNSCHFQRSS*RLKGDS
Trigger: AGAATCCCCCTTTAGCCGCAAACTAGATCTCTGGAA...GTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp TGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATTCACCAGTCTTGGTGTaGATTTCTGCCACAATTCCC +
Preference number: 5 (lower is better)
Translates to: WNANTVQVRCRPASRSAHSPVLV*ISATIP
Trigger: GGGAATTGTGGCAGAAATCAACACCAAGACTGGTGA...ATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACAGATCACAAGCACTTCTaGGAACAGGAAAACATGCAG +
Preference number: 5 (lower is better)
Translates to: VECKYCTGKMQACFPKCTDHKHF*EQENMQ
Trigger: CTGCATGTTTTCCTGTTCCAAGAAGTGCTTGTGATC...TGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATAGGTCTTTCACGGGGATaGGCTGACGGTACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: TESNLFEYLSIHPDTWEIGLSRG*ADGTAG
Trigger: ACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGACC...TATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp GTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACACGAGTGGGTCTGACTTaGGGATCCATTTTTGAAACT +
Preference number: 5 (lower is better)
Translates to: VECKYCTGKMQACFPKCTRVGLT*GSIFET
Trigger: AGTTTCAAAAATGGATCCCAAAGTCAGACCCACTCG...TGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp AGTATGAAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTAGTCAAGCACCCCAGCTaGCCCGGCAGCACACAAAAC +
Preference number: 5 (lower is better)
Translates to: SMKKCFSKPFHLWNANTVVKHPS*PGSTQN
Trigger: GTTTTGTGTGCTGCCGGGCAAGCTGGGGTGCTTGAC...TACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTTCATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCTTACACAGACAGATaGGCAGTTACAGTACTAGGG +
Preference number: 5 (lower is better)
Translates to: HLWNANTVQVRCRPASRSAYTDR*AVTVLG
Trigger: CCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC...ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGGCCTTCCTAAGCCCTTaGGGTTCTATTCTGATGTTT +
Preference number: 5 (lower is better)
Translates to: VPSVECKYCTGKMQACFPAFLSP*GSILMF
Trigger: AAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGC...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCACCAGAGATGGCAAATaGACGACCCAAAAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSTRDGK*TTQKQS
Trigger: GCTCTGCTTTTGGGTCGTCAATTTGCCATCTCTGGT...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CAA 90 bp CTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGGTGCTCTGGGAAACATGGGAAAGTaGTTTTGCCGCTGCCGTTTA +
Preference number: 5 (lower is better)
Translates to: LTYVETAKANSIFILGALGNMGK*FCRCRL
Trigger: TAAACGGCAGCGGCAAAACAACTTTCCCATGTTTCC...CAGAGCACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477833.5
ENST00000486829.1
CDS-3UTR CAA 90 bp AGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAAGCCAAAGTAGCCAATaGTGGTGGCAAACCTCAATC +
Preference number: 5 (lower is better)
Translates to: RLAVTVLGTKVQIRETGPSQSSQ*WWQTSI
Trigger: GATTGAGGTTTGCCACCACAATTGGCTACTTTGGCT...TGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413728.6
CDS-3UTR CAA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGACTCGGGAAAGGGGTTaGACCCGTTTATTACTAGGC +
Preference number: 5 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQTRERG*TRLLLG
Trigger: GCCTAGTAATAAACGGGTCAAACCCCTTTCCCGAGT...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CTCTCCTGTGTTTCTATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTGTCTCACTCCACAGCTaGCTATCTCTCCGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: LSCVSINSVIDRVMVSLPVSLHS*LSLRFV
Trigger: CACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGAC...AGGAAGAGAGACCATGACTCTATCGATGACACTGTTTATAGAAACACAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp ACAACTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAGTCTCACTCCACAGCTaGCTATCTCTCCGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: TTESNLFEYLSIHPDTWEVSLHS*LSLRFV
Trigger: CACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGAC...TTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp TTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGTCTCACTCCACAGCTaGCTATCTCTCCGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: LGNTTQGNSCHRFQLTQTVSLHS*LSLRFV
Trigger: CACGAAACGGAGAGATAGCAAGCTGTGGAGTGAGAC...TGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACCAAGTCTTCTTCTCCTaGGGAAAGCTCAAAGATCGC +
Preference number: 5 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYQVFFS*GKLKDR
Trigger: GCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTTG...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ATACAAATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCCAAGTCTTCTTCTCCTaGGGAAAGCTCAAAGATCGC +
Preference number: 5 (lower is better)
Translates to: IQMQFDFKTVAFLFPPAAQVFFS*GKLKDR
Trigger: GCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTTG...GGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CAA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGAGCTTTGGCGGCTACTaGATTGCTGCAGTAGCTATC +
Preference number: 5 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTSFGGY*IAAVAI
Trigger: GATAGCTACTGCAGCAATCAAGTAGCCGCCAAAGCT...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTTGGCGGCTACTaGATTGCTGCAGTAGCTATC +
Preference number: 5 (lower is better)
Translates to: IHPDTWEIQHRVIVATDSSFGGY*IAAVAI
Trigger: GATAGCTACTGCAGCAATCAAGTAGCCGCCAAAGCT...GGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTTTCCAGAGATCTAGTTaGCGGCTAAAGGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLAFQRSS*RLKGDS
Trigger: AGAATCCCCCTTTAGCCGCAAACTAGATCTCTGGAA...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp ATACAAATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCTTCCAGAGATCTAGTTaGCGGCTAAAGGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: IQMQFDFKTVAFLFPPAAFQRSS*RLKGDS
Trigger: AGAATCCCCCTTTAGCCGCAAACTAGATCTCTGGAA...GGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CAA 90 bp CAGATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTGGCAGGCCTTCCTATTACCAGGCGGCTTCTaGGAATATCGAGGAAATTCC +
Preference number: 5 (lower is better)
Translates to: QMKHNEYRAFLLSWQAFLLPGGF*EYRGNS
Trigger: GGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTAA...TAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACATTACCAGGCGGCTTCTaGGAATATCGAGGAAATTCC +
Preference number: 5 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATLPGGF*EYRGNS
Trigger: GGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTAA...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ATACAAATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCTTACCAGGCGGCTTCTaGGAATATCGAGGAAATTCC +
Preference number: 5 (lower is better)
Translates to: IQMQFDFKTVAFLFPPAALPGGF*EYRGNS
Trigger: GGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTAA...GGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CAA 90 bp ATACAAATGCAGTTTGACTTCAAGACCGTGGCTTTTCTCTTTCCACCAGCTGCCTCACCAGTCTTGGTGTaGATTTCTGCCACAATTCCC +
Preference number: 5 (lower is better)
Translates to: IQMQFDFKTVAFLFPPAASPVLV*ISATIP
Trigger: GGGAATTGTGGCAGAAATCAACACCAAGACTGGTGA...GGCAGCTGGTGGAAAGAGAAAAGCCACGGTCTTGAAGTCAAACTGCATTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CAA 90 bp TGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATTCAGATTCACCAGTCTaGGTGTTGATTTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: WNANTVQVRCRPASRSAHSDSPV*VLISAT
Trigger: TGTGGCAGAAATCAACACCAAGACTGGTGAATCTGA...ATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCTCAGATTCACCAGTCTaGGTGTTGATTTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: TVPSVECKYCTGKMQACFSDSPV*VLISAT
Trigger: TGTGGCAGAAATCAACACCAAGACTGGTGAATCTGA...GAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACTTAATTCTCTCATTGTaGCTGAATGCCCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYLILSL*LNAPRR
Trigger: CCTGCGAGGGGCATTCAGCAACAATGAGAGAATTAA...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCTTAAGCCACTGCTGTTaGTTGAAAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: SVECKYCTGKMQACFPKCLSHCC*LKVSLA
Trigger: AGCCAATGACACTTTCAACAAACAGCAGTGGCTTAA...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCGCTTACACAGACAGATaGGCAGTTACAGTACTAGGG +
Preference number: 5 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSAYTDR*AVTVLG
Trigger: CCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ACAAGCACTTCTTGGAACAGGAAAACATGCAGTTTCACGCCCCGATTGTTCTTCCATCCATCCAGACACTaGGGAAATACAACACAGGGT +
Preference number: 5 (lower is better)
Translates to: TSTSWNRKTCSFTPRLFFHPSRH*GNTTQG
Trigger: ACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG...GAAGAACAATCGGGGCGTGAAACTGCATGTTTTCCTGTTCCAAGAAGTGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR CAA 90 bp GCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTCTCTGAAAGTAACTTGTTaGAGTACCTCTCCATCCATC +
Preference number: 5 (lower is better)
Translates to: ANTVQVRCRPASRSAHASLKVTC*STSPSI
Trigger: GATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG...AGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp AAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGAGAATACAGGGCCTTCTaGTTATCCTGGCAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: KCFSKPFHLWNANTVQVREYRAF*LSWQAF
Trigger: GAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTC...TCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp TACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTACCAGAGATGGCAAATaGACGACCCAAAAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: YSTRDKGTDTRDWANMYTTRDGK*TTQKQS
Trigger: GCTCTGCTTTTGGGTCGTCAATTTGCCATCTCTGGT...AGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CAA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTCCCATAGGCCAACACTaGACAAACCTCTTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLAPIGQH*TNLFSQ
Trigger: TTGGGAAAAGAGGTTTGTCAAGTGTTGGCCTATGGG...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CAA 90 bp GCAGTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTAACAGCATCTTCATCTaGGGTGCTCTGTTTCCGTTT +
Preference number: 5 (lower is better)
Translates to: AVTVLGTKVQIRETGPTCNSIFI*GALFPF
Trigger: AAACGGAAACAGAGCACCCAAGATGAAGATGCTGTT...ACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338458.8
ENST00000496106.5
CDS-3UTR CAA 90 bp GAGGGAAACATGGGAAAGTTGTTTTGCCGCTGCCGTTTAGGCATGAATTCTCAGAACAGCATCTTCATCTaGGGTGCTCTGTTTCCGTTT +
Preference number: 5 (lower is better)
Translates to: EGNMGKLFCRCRLGMNSQNSIFI*GALFPF
Trigger: AAACGGAAACAGAGCACCCAAGATGAAGATGCTGTT...CTGAGAATTCATGCCTAAACGGCAGCGGCAAAACAACTTTCCCATGTTTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477833.5
CDS-3UTR CAA 90 bp ATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGGTGCTCTGTTTCCGTAACAGCATCTTCATCTaGGGTGCTCTGTTTCCGTTT +
Preference number: 5 (lower is better)
Translates to: MSRLQRLTASSSWVLCFRNSIFI*GALFPF
Trigger: AAACGGAAACAGAGCACCCAAGATGAAGATGCTGTT...ACGGAAACAGAGCACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477833.5
ENST00000486829.1
CDS-3UTR CAA 90 bp CATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTAACAGCATCTTCATCTaGGGTGCTCTGTTTCCGTTT +
Preference number: 5 (lower is better)
Translates to: HLWNANTVQVRCRPASRSNSIFI*GALFPF
Trigger: AAACGGAAACAGAGCACCCAAGATGAAGATGCTGTT...ACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338458.8
ENST00000496106.5
CDS CCA 90 bp GGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTaGGTGCTCTGTTTCCGTTTTCGCTTTTATGATAGGAGGACAGAT +
Preference number: 5 (lower is better)
Translates to: GSLMSRLQRLTASSS*VLCFRFRFYDRRTD
Trigger: ATCTGTCCTCCTATCATAAAAGCGAAAACGGAAACAGAGCACCCAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481422.5
CDS-3UTR CAA 90 bp CCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACAAGTCTTCTTCTCCTaGGGAAAGCTCAAAGATCGC +
Preference number: 5 (lower is better)
Translates to: PDTWEIQHRVIVATDSSLQVFFS*GKLKDR
Trigger: GCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTTG...TAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp AATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGAGCTTTGGCGGCTACTaGATTGCTGCAGTAGCTATC +
Preference number: 5 (lower is better)
Translates to: NTTQGNSCHRFQLTQTDWSFGGY*IAAVAI
Trigger: GATAGCTACTGCAGCAATCAAGTAGCCGCCAAAGCT...CCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTTCCAGAGATCTAGTTaGCGGCTAAAGGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: GNSCHRFQLTQTDWQLQYFQRSS*RLKGDS
Trigger: AGAATCCCCCTTTAGCCGCAAACTAGATCTCTGGAA...GTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACATTCCAGAGATCTAGTTaGCGGCTAAAGGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: TRDKGTDTRDWANMYTFTFQRSS*RLKGDS
Trigger: AGAATCCCCCTTTAGCCGCAAACTAGATCTCTGGAA...TGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTATTCCAGAGATCTAGTTaGCGGCTAAAGGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: TQGNSCHRFQLTQTDWQLFQRSS*RLKGDS
Trigger: AGAATCCCCCTTTAGCCGCAAACTAGATCTCTGGAA...TAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACATTACCAGGCGGCTTCTaGGAATATCGAGGAAATTCC +
Preference number: 5 (lower is better)
Translates to: DSSLHRQIGSYSTRDKGTLPGGF*EYRGNS
Trigger: GGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTAA...TGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTATCACCAGTCTTGGTGTaGATTTCTGCCACAATTCCC +
Preference number: 5 (lower is better)
Translates to: PDTWEIQHRVIVATDSSLSPVLV*ISATIP
Trigger: GGGAATTGTGGCAGAAATCAACACCAAGACTGGTGA...TAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCTCACCAGTCTTGGTGTaGATTTCTGCCACAATTCCC +
Preference number: 5 (lower is better)
Translates to: IQHRVIVATDSSLHRQIGSPVLV*ISATIP
Trigger: GGGAATTGTGGCAGAAATCAACACCAAGACTGGTGA...GCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CAGATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTGGCAGGCCTTCCTATCAGATTCACCAGTCTaGGTGTTGATTTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: QMKHNEYRAFLLSWQAFLSDSPV*VLISAT
Trigger: TGTGGCAGAAATCAACACCAAGACTGGTGAATCTGA...TAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp CAGATGAAACACAATGAATACAGGGCCTTCTTGTTATCCTGGCAGGCCTTCCTAGATCACAAGCACTTCTaGGAACAGGAAAACATGCAG +
Preference number: 5 (lower is better)
Translates to: QMKHNEYRAFLLSWQAFLDHKHF*EQENMQ
Trigger: CTGCATGTTTTCCTGTTCCAAGAAGTGCTTGTGATC...TAGGAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTCATTGTGTTTCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp CACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACGATCACAAGCACTTCTaGGAACAGGAAAACATGCAG +
Preference number: 5 (lower is better)
Translates to: HRVIVATDSSLHRQIGSYDHKHF*EQENMQ
Trigger: CTGCATGTTTTCCTGTTCCAAGAAGTGCTTGTGATC...GTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp TTACCTGCTTGTTTCACCGAGTATCATGTTAGATACTCGATAGATATTGCTATCGGTCTTTCACGGGGATaGGCTGACGGTACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: LPACFTEYHVRYSIDIAIGLSRG*ADGTAG
Trigger: ACCAGCTGTACCGTCAGCCAATCCCCGTGAAAGACC...GATAGCAATATCTATCGAGTATCTAACATGATACTCGGTGAAACAAGCAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS-3UTR CAA 90 bp CCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTATTAATTCTCTCATTGTaGCTGAATGCCCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: PDTWEIQHRVIVATDSSLLILSL*LNAPRR
Trigger: CCTGCGAGGGGCATTCAGCAACAATGAGAGAATTAA...TAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACTTAATTCTCTCATTGTaGCTGAATGCCCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: DTWEIQHRVIVATDSSLHLILSL*LNAPRR
Trigger: CCTGCGAGGGGCATTCAGCAACAATGAGAGAATTAA...GTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CCATCCCAATACACAGATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTTAATTCTCTCATTGTaGCTGAATGCCCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: PSQYTDEFLMPYLQGRLNLILSL*LNAPRR
Trigger: CCTGCGAGGGGCATTCAGCAACAATGAGAGAATTAA...ATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATCTGTGTATTGGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp ACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTTTAATTCTCTCATTGTaGCTGAATGCCCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: TDSSLHRQIGSYSTRDKGLILSL*LNAPRR
Trigger: CCTGCGAGGGGCATTCAGCAACAATGAGAGAATTAA...ACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTCTCTTTGGGATCCATTTTaGAAACTGACTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: ANTVQVRCRPASRSAHASLWDPF*KLTLKK
Trigger: CTTCTTCAGAGTCAGTTTCAAAAATGGATCCCAAAG...AGAAGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGCGAGTGGGTCTGACTTaGGGATCCATTTTTGAAACT +
Preference number: 5 (lower is better)
Translates to: TTQGNSCHRFQLTQTDWQRVGLT*GSIFET
Trigger: AGTTTCAAAAATGGATCCCAAAGTCAGACCCACTCG...CTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCCGAGTGGGTCTGACTTaGGGATCCATTTTTGAAACT +
Preference number: 5 (lower is better)
Translates to: HPDTWEIQHRVIVATDSSRVGLT*GSIFET
Trigger: AGTTTCAAAAATGGATCCCAAAGTCAGACCCACTCG...GCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGTTGTTGAAAGTGTCATaGGCTTGTAGCGAGTGGGTC +
Preference number: 5 (lower is better)
Translates to: IPAYTDRLAVTVLGTKVQLLKVS*ACSEWV
Trigger: GACCCACTCGCTACAAGCCAATGACACTTTCAACAA...CTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACATTGTTGAAAGTGTCATaGGCTTGTAGCGAGTGGGTC +
Preference number: 5 (lower is better)
Translates to: TRDKGTDTRDWANMYTFTLLKVS*ACSEWV
Trigger: GACCCACTCGCTACAAGCCAATGACACTTTCAACAA...TGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACTTGTTGAAAGTGTCATaGGCTTGTAGCGAGTGGGTC +
Preference number: 5 (lower is better)
Translates to: DTWEIQHRVIVATDSSLHLLKVS*ACSEWV
Trigger: GACCCACTCGCTACAAGCCAATGACACTTTCAACAA...GTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp AATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATGCTTTAAGCCACTGCTGTTaGTTGAAAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: NANTVQVRCRPASRSAHALSHCC*LKVSLA
Trigger: AGCCAATGACACTTTCAACAAACAGCAGTGGCTTAA...AGCATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAACTGTTTCTTTGGCTaGACGAATACAGTTAAGCCA +
Preference number: 5 (lower is better)
Translates to: VPSVECKYCTGKMQACFPNCFFG*TNTVKP
Trigger: TGGCTTAACTGTATTCGTCAAGCCAAAGAAACAGTT...CGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCGCTTACACAGACAGATaGGCAGTTACAGTACTAGGG +
Preference number: 5 (lower is better)
Translates to: HPSRHLGNTTQGNSCHRFAYTDR*AVTVLG
Trigger: CCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC...GAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp TACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTGCTTACACAGACAGATaGGCAGTTACAGTACTAGGG +
Preference number: 5 (lower is better)
Translates to: YSTRDKGTDTRDWANMYTAYTDR*AVTVLG
Trigger: CCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGC...AGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CCATCCCAATACACAGATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATCATCCATCCAGACACTaGGGAAATACAACACAGGGT +
Preference number: 5 (lower is better)
Translates to: PSQYTDEFLMPYLQGRLNHPSRH*GNTTQG
Trigger: ACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG...ATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATCTGTGTATTGGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp ATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCCATCCATCCAGACACTaGGGAAATACAACACAGGGT +
Preference number: 5 (lower is better)
Translates to: IHPDTWEIQHRVIVATDSHPSRH*GNTTQG
Trigger: ACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG...GGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CTTGTTATCCTGGCAGGCCTTCCTAAGCCCTTTGGGTTCTATTCTGATGTTTTACATCCATCCAGACACTaGGGAAATACAACACAGGGT +
Preference number: 5 (lower is better)
Translates to: LVILAGLPKPFGFYSDVLHPSRH*GNTTQG
Trigger: ACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG...TAAAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGCCTGCCAGGATAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp GATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACACATCCATCCAGACACTaGGGAAATACAACACAGGGT +
Preference number: 5 (lower is better)
Translates to: DSSLHRQIGSYSTRDKGTHPSRH*GNTTQG
Trigger: ACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG...TGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACCTGAAAGTAACTTGTTaGAGTACCTCTCCATCCATC +
Preference number: 5 (lower is better)
Translates to: PLHPSRHLGNTTQGNSCHLKVTC*STSPSI
Trigger: GATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG...GTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp GTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACAACAACTGAAAGTAACTaGTTTGAGTACCTCTCCATC +
Preference number: 5 (lower is better)
Translates to: VECKYCTGKMQACFPKCTTTESN*FEYLSI
Trigger: GATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT...TGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp TGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCACATTTGCACTGGATGAAGTaGCAAAGTTCAGACAATGCA +
Preference number: 5 (lower is better)
Translates to: WNANTVQVRCRPASRSAHLHWMK*QSSDNA
Trigger: TGCATTGTCTGAACTTTGCAACTTCATCCAGTGCAA...ATGTGCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp ATTGTTCTTCAGTTCACCATGACAACACAAGACTCGAGAGCTGTCGATCAGGGAGCCTTCCTAAGCCCTTaGGGTTCTATTCTGATGTTT +
Preference number: 5 (lower is better)
Translates to: IVLQFTMTTQDSRAVDQGAFLSP*GSILMF
Trigger: AAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGC...TCCCTGATCGACAGCTCTCGAGTCTTGTGTTGTCATGGTGAACTGAAGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR CAA 90 bp ATCAAAACATTCATTGACCACCTTCCCATAGGCCAACACTTGACAAACCTCTTTGAATACAGGGCCTTCTaGTTATCCTGGCAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: IKTFIDHLPIGQHLTNLFEYRAF*LSWQAF
Trigger: GAAGGCCTGCCAGGATAACAAGAAGGCCCTGTATTC...AAAGAGGTTTGTCAAGTGTTGGCCTATGGGAAGGTGGTCAATGAATGTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CAA 90 bp TCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGGCCTGCTTCCCGAAGTGCGGTGTGGGTATAATTTaGCACAGGTCATCCTTAATA +
Preference number: 5 (lower is better)
Translates to: SVECKYCTGKMQACFPKCGVGII*HRSSLI
Trigger: TATTAAGGATGACCTGTGCAAAATTATACCCACACC...GCACTTCGGGAAGCAGGCCTGCATCTTACCTGTACAGTATTTGCATTCCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CAA 90 bp GGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATCAAGTCTTCTTCTCCTaGGGAAAGCTCAAAGATCGC +
Preference number: 5 (lower is better)
Translates to: GNTTQGNSCHRFQLTQTDQVFFS*GKLKDR
Trigger: GCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTTG...ATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp AAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGACAAGTCTTCTTCTCCTaGGGAAAGCTCAAAGATCGC +
Preference number: 5 (lower is better)
Translates to: KCFSKPFHLWNANTVQVRQVFFS*GKLKDR
Trigger: GCGATCTTTGAGCTTTCCCAAGGAGAAGAAGACTTG...TCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAAAAGTATCTGGACTCGGTGATCTaGCTTTTTGTGGTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: TKVQIRETGPTCILSQKYLDSVI*LFVVQQ
Trigger: CTGCTGGACCACAAAAAGCAAGATCACCGAGTCCAG...ATACTTTTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp AAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATTACCAGGCGGCTTCTaGGAATATCGAGGAAATTCC +
Preference number: 5 (lower is better)
Translates to: KCFSKPFHLWNANTVQVRLPGGF*EYRGNS
Trigger: GGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTAA...TCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp AGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACTTACCAGGCGGCTTCTaGGAATATCGAGGAAATTCC +
Preference number: 5 (lower is better)
Translates to: SNLFEYLSIHPDTWEIQHLPGGF*EYRGNS
Trigger: GGAATTTCCTCGATATTCCAAGAAGCCGCCTGGTAA...GTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp CTCTCCTGTGTTTCTATAAACAGTGTCATCGATAGAGTCATGGTCTCTCTTCCTTCACCAGTCTTGGTGTaGATTTCTGCCACAATTCCC +
Preference number: 5 (lower is better)
Translates to: LSCVSINSVIDRVMVSLPSPVLV*ISATIP
Trigger: GGGAATTGTGGCAGAAATCAACACCAAGACTGGTGA...AGGAAGAGAGACCATGACTCTATCGATGACACTGTTTATAGAAACACAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp ACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACATCAGATTCACCAGTCTaGGTGTTGATTTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: TRDKGTDTRDWANMYTFTSDSPV*VLISAT
Trigger: TGTGGCAGAAATCAACACCAAGACTGGTGAATCTGA...TGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp AGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCTCAGATTCACCAGTCTaGGTGTTGATTTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: STRDKGTDTRDWANMYTFSDSPV*VLISAT
Trigger: TGTGGCAGAAATCAACACCAAGACTGGTGAATCTGA...GAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CCATCCCAATACACAGATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATGATCACAAGCACTTCTaGGAACAGGAAAACATGCAG +
Preference number: 5 (lower is better)
Translates to: PSQYTDEFLMPYLQGRLNDHKHF*EQENMQ
Trigger: CTGCATGTTTTCCTGTTCCAAGAAGTGCTTGTGATC...ATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATCTGTGTATTGGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp CCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATAGATCACAAGCACTTCTaGGAACAGGAAAACATGCAG +
Preference number: 5 (lower is better)
Translates to: PAYTDRLAVTVLGTKVQIDHKHF*EQENMQ
Trigger: CTGCATGTTTTCCTGTTCCAAGAAGTGCTTGTGATC...TATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTAGATCACAAGCACTTCTaGGAACAGGAAAACATGCAG +
Preference number: 5 (lower is better)
Translates to: PDTWEIQHRVIVATDSSLDHKHF*EQENMQ
Trigger: CTGCATGTTTTCCTGTTCCAAGAAGTGCTTGTGATC...TAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTTTTAATTCTCTCATaGTTGCTGAATGCCCCTCGC +
Preference number: 5 (lower is better)
Translates to: TTQGNSCHRFQLTQTDWQFLILS*LLNAPR
Trigger: GCGAGGGGCATTCAGCAACAATGAGAGAATTAAAAA...CTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ATTGTTCTTCAGTTCACCATGACAACACAAGACTCGAGAGCTGTCGATCAGGGATTTTTAATTCTCTCATaGTTGCTGAATGCCCCTCGC +
Preference number: 5 (lower is better)
Translates to: IVLQFTMTTQDSRAVDQGFLILS*LLNAPR
Trigger: GCGAGGGGCATTCAGCAACAATGAGAGAATTAAAAA...TCCCTGATCGACAGCTCTCGAGTCTTGTGTTGTCATGGTGAACTGAAGAACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465659.5
CDS-3UTR CAA 90 bp CCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACCTTTGGGATCCATTTTaGAAACTGACTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: PLHPSRHLGNTTQGNSCHLWDPF*KLTLKK
Trigger: CTTCTTCAGAGTCAGTTTCAAAAATGGATCCCAAAG...GTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGCAGCGAGTGGGTCTGACTTaGGGATCCATTTTTGAAACT +
Preference number: 5 (lower is better)
Translates to: LLQTVPSVECKYCTGKMQRVGLT*GSIFET
Trigger: AGTTTCAAAAATGGATCCCAAAGTCAGACCCACTCG...CTGCATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp AATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGTTGTTGAAAGTGTCATaGGCTTGTAGCGAGTGGGTC +
Preference number: 5 (lower is better)
Translates to: NTTQGNSCHRFQLTQTDWLLKVS*ACSEWV
Trigger: GACCCACTCGCTACAAGCCAATGACACTTTCAACAA...CCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACTTGTTGAAAGTGTCATaGGCTTGTAGCGAGTGGGTC +
Preference number: 5 (lower is better)
Translates to: LKVTCLSTSPSIQTLGKYLLKVS*ACSEWV
Trigger: GACCCACTCGCTACAAGCCAATGACACTTTCAACAA...GTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp ACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTAAGCCACTGCTGTTaGTTGAAAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: TTQGNSCHRFQLTQTDWQLSHCC*LKVSLA
Trigger: AGCCAATGACACTTTCAACAAACAGCAGTGGCTTAA...CTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GGAAATACAACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATCATCCATCCAGACACTaGGGAAATACAACACAGGGT +
Preference number: 5 (lower is better)
Translates to: GNTTQGNSCHRFQLTQTDHPSRH*GNTTQG
Trigger: ACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATG...ATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGTTGTATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CCTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACACAACTGAAAGTAACTaGTTTGAGTACCTCTCCATC +
Preference number: 5 (lower is better)
Translates to: PLHPSRHLGNTTQGNSCHTTESN*FEYLSI
Trigger: GATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT...GTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp GTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGGTAAGATGGCCTTCCTAAGCCCTTaGGGTTCTATTCTGATGTTT +
Preference number: 5 (lower is better)
Translates to: VLLQTVPSVECKYCTGKMAFLSP*GSILMF
Trigger: AAACATCAGAATAGAACCCAAAGGGCTTAGGAAGGC...CATCTTACCTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp CTGAAAGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACGGAAACATGGGAAAGTaGTTTTGCCGCTGCCGTTTA +
Preference number: 5 (lower is better)
Translates to: LKVTCLSTSPSIQTLGKYGNMGK*FCRCRL
Trigger: TAAACGGCAGCGGCAAAACAACTTTCCCATGTTTCC...GTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338458.8
CDS-3UTR CAA 90 bp ATTACTAGGCTCACTTATGTCGAGACTGCAAAGGCTAACAGCATCTTCATCTTGGGAAACATGGGAAAGTaGTTTTGCCGCTGCCGTTTA +
Preference number: 5 (lower is better)
Translates to: ITRLTYVETAKANSIFILGNMGK*FCRCRL
Trigger: TAAACGGCAGCGGCAAAACAACTTTCCCATGTTTCC...CAAGATGAAGATGCTGTTAGCCTTTGCAGTCTCGACATAAGTGAGCCTAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477833.5
ENST00000486829.1
CDS-3UTR CAA 90 bp GTTGACCATTCTTATGTCTCTTTAGGGACAAGTTTACCAGTTCAGCTGCAAAACATACTTCTCTCATTGTaGCTGAATGCCCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: VDHSYVSLGTSLPVQLQNILLSL*LNAPRR
Trigger: CCTGCGAGGGGCATTCAGCAACAATGAGAGAAGTAT...GTTTTGCAGCTGAACTGGTAAACTTGTCCCTAAAGAGACATAAGAATGGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495373.5
CDS TCA 90 bp TTGACCCGTTTATTACTAGGCTCCCTTGTCCTCCTAAGCTCCATCTaGCCTGTAGTAGATGCTAGACAGCACATGAAGATACCAAATTTT +
Preference number: 5 (lower is better)
Translates to: LTRLLLGSLVLLSSI*PVVDARQHMKIPNF
Trigger: AAAATTTGGTATCTTCATGTGCTGTCTAGCATCTACTACAGGTCAGATGGAGCTTAGGAGGACAAGGGAGCCTAGTAATAAACGGGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413728.6
CDS GCA 90 bp GAATTTGGAATCCTGCTGAGACACTCTCATGTCATTTTATGCCCCTaGCAGTCTCAGAAATCAACAGCCTTCTTTGAAATAGACTGTCTC +
Preference number: 5 (lower is better)
Translates to: EFGILLRHSHVILCP*QSQKSTAFFEIDCL
Trigger: GAGACAGTCTATTTCAAAGAAGGCTGTTGATTTCTGAGACTGGCAGGGGCATAAAATGACATGAGAGTGTCTCAGCAGGATTCCAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413728.6
ENST00000497267.5
CDS-3UTR CAA 90 bp ACTGTAAATCAAGGCTGGACAAAGAGGTTACTAATCTGGCTAGCTGATTCTAATACTCGGGAAAGGGGTTaGACCCGTTTATTACTAGGC +
Preference number: 5 (lower is better)
Translates to: TVNQGWTKRLLIWLADSNTRERG*TRLLLG
Trigger: GCCTAGTAATAAACGGGTCAAACCCCTTTCCCGAGT...ATTAGAATCAGCTAGCCAGATTAGTAACCTCTTTGTCCAGCCTTGATTTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
CDS-3UTR CAA 90 bp ACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTTTCACAAAAGTATAGCTTTGGCGGCTACTaGATTGCTGCAGTAGCTATC +
Preference number: 5 (lower is better)
Translates to: TKVQIRETGPTCILSQKYSFGGY*IAAVAI
Trigger: GATAGCTACTGCAGCAATCAAGTAGCCGCCAAAGCT...ATACTTTTGTGAAAGTATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CTCTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGATCTGGATTATCATTaGGTGTGTGCCTCAAGATTT +
Preference number: 5 (lower is better)
Translates to: LSIHPDTWEIQHRVIVATDLDYH*VCASRF
Trigger: AAATCTTGAGGCACACACCAAATGATAATCCAGATC...TGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGAGATCTGGATTATCATTaGGTGTGTGCCTCAAGATTT +
Preference number: 5 (lower is better)
Translates to: LHPSRHLGNTTQGNSCHRDLDYH*VCASRF
Trigger: AAATCTTGAGGCACACACCAAATGATAATCCAGATC...TCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTTTTTTAATTCTCTCATaGTTGCTGAATGCCCCTCGC +
Preference number: 5 (lower is better)
Translates to: TDSSLHRQIGSYSTRDKGFLILS*LLNAPR
Trigger: GCGAGGGGCATTCAGCAACAATGAGAGAATTAAAAA...ACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGTTTTTAATTCTCTCATaGTTGCTGAATGCCCCTCGC +
Preference number: 5 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTFLILS*LLNAPR
Trigger: GCGAGGGGCATTCAGCAACAATGAGAGAATTAAAAA...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp ACACAGGGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTATTTTTAATTCTCTCATaGTTGCTGAATGCCCCTCGC +
Preference number: 5 (lower is better)
Translates to: TQGNSCHRFQLTQTDWQLFLILS*LLNAPR
Trigger: GCGAGGGGCATTCAGCAACAATGAGAGAATTAAAAA...TAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACCCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp AGTAACTTGTTTGAGTACCTCTCCATCCATCCAGACACTTGGGAAATACAACACCGAGTGGGTCTGACTTaGGGATCCATTTTTGAAACT +
Preference number: 5 (lower is better)
Translates to: SNLFEYLSIHPDTWEIQHRVGLT*GSIFET
Trigger: AGTTTCAAAAATGGATCCCAAAGTCAGACCCACTCG...GTGTTGTATTTCCCAAGTGTCTGGATGGATGGAGAGGTACTCAAACAAGTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp ATGAAAAAGTGCTTCTCCAAACCGTTCCATCTGTGGAATGCAAATACTGTACAGTTGTTGAAAGTGTCATaGGCTTGTAGCGAGTGGGTC +
Preference number: 5 (lower is better)
Translates to: MKKCFSKPFHLWNANTVQLLKVS*ACSEWV
Trigger: GACCCACTCGCTACAAGCCAATGACACTTTCAACAA...CTGTACAGTATTTGCATTCCACAGATGGAACGGTTTGGAGAAGCACTTTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp CCATCCCAATACACAGATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTTAAGCCACTGCTGTTaGTTGAAAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: PSQYTDEFLMPYLQGRLNLSHCC*LKVSLA
Trigger: AGCCAATGACACTTTCAACAAACAGCAGTGGCTTAA...ATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATCTGTGTATTGGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp GTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATATTAAGCCACTGCTGTTaGTTGAAAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: VTVLGTKVQIRETGPTCILSHCC*LKVSLA
Trigger: AGCCAATGACACTTTCAACAAACAGCAGTGGCTTAA...TATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
ENST00000497267.5
CDS-3UTR CAA 90 bp GGTAATAGTTGCCACAGATTCCAGCTTACACAGACAGATTGGCAGTTACAGTACCTGAAAGTAACTTGTTaGAGTACCTCTCCATCCATC +
Preference number: 5 (lower is better)
Translates to: GNSCHRFQLTQTDWQLQYLKVTC*STSPSI
Trigger: GATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG...GTACTGTAACTGCCAATCTGTCTGTGTAAGCTGGAATCTGTGGCAACTATTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp AGCTTACACAGACAGATTGGCAGTTACAGTACTAGGGACAAAGGTACAGATACGCTGAAAGTAACTTGTTaGAGTACCTCTCCATCCATC +
Preference number: 5 (lower is better)
Translates to: SLHRQIGSYSTRDKGTDTLKVTC*STSPSI
Trigger: GATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG...CGTATCTGTACCTTTGTCCCTAGTACTGTAACTGCCAATCTGTCTGTGTAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp GTTACAGTACTAGGGACAAAGGTACAGATACGAGAGACTGGGCCAACATGTATACTGAAAGTAACTTGTTaGAGTACCTCTCCATCCATC +
Preference number: 5 (lower is better)
Translates to: VTVLGTKVQIRETGPTCILKVTC*STSPSI
Trigger: GATGGATGGAGAGGTACTCAAACAAGTTACTTTCAG...TATACATGTTGGCCCAGTCTCTCGTATCTGTACCTTTGTCCCTAGTACTGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
ENST00000496106.5
CDS-3UTR CAA 90 bp GATGAGTTCCTCATGCCCTATTTACAAGGCCGTCTAAATTCCGTGCCTTTAGCTACAACTGAAAGTAACTaGTTTGAGTACCTCTCCATC +
Preference number: 5 (lower is better)
Translates to: DEFLMPYLQGRLNSVPLATTESN*FEYLSI
Trigger: GATGGAGAGGTACTCAAACAAGTTACTTTCAGTTGT...AGCTAAAGGCACGGAATTTAGACGGCCTTGTAAATAGGGCATGAGGAACTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5
CDS-3UTR CAA 90 bp CTCCATCCATCCAGACACTTGGGAAATACAACACAGGGTAATAGTTGCCACAGAATTCTTGCATCAAACTaGCACTGGATGAAGTTGCAA +
Preference number: 5 (lower is better)
Translates to: LHPSRHLGNTTQGNSCHRILASN*HWMKLQ
Trigger: TTGCAACTTCATCCAGTGCAAGTTTGATGCAAGAAT...TCTGTGGCAACTATTACCCTGTGTTGTATTTCCCAAGTGTCTGGATGGATGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296315.8
ENST00000338458.8
ENST00000413728.6
ENST00000465659.5