RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF28 (Homo sapiens)

Ensembl gene IDs: ENSG00000214944

Ensembl transcript IDs: ENST00000296794.10, ENST00000296799.8, ENST00000426542.6, ENST00000437974.5, ENST00000503341.1, ENST00000504003.1, ENST00000506334.1, ENST00000509848.5, ENST00000510131.1, ENST00000510312.6, ENST00000512883.1, ENST00000513042.6, ENST00000513042.7, ENST00000513841.1, ENST00000545377.5

Found 1057 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGAGAAAAACCCTTTCCCACATCCTCCTCTGCCTATGTGGGCACTaGGGCAACTGCCCTGACTGTGAAAGTTCACCCCTTGTGAATACC +
Preference number: 1 (lower is better)
Translates to: LRKTLSHILLCLCGH*GNCPDCESSPLVNT
Trigger: GGTATTCACAAGGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAAGGGTTTTTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR GCA 90 bp CCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATaGCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTA +
Preference number: 1 (lower is better)
Translates to: PGFSHRDPYYSEGRI*QFSFVEKCIQAANL
Trigger: TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR CCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGCCTCCTCTGCCTATGTaGGCACTGAGGCAACTGCCC +
Preference number: 2 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQPPLPM*ALRQLP
Trigger: GGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGG...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTGTATCCCTGGCTCAGTaGCTGACCAATCACAACACG +
Preference number: 2 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSVSLAQ*LTNHNT
Trigger: CGTGTTGTGATTGGTCAGTCACTGAGCCAGGGATAC...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR CCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTGGGGCTCTGGGCCTCTaGGCCTTGTTAAAAGATGAT +
Preference number: 2 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSGALGL*ALLKDD
Trigger: ATCATCTTTTAACAAGGCCCAGAGGCCCAGAGCCCC...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR GCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCGGGAGTGGTAGTTGGTaGTCCAGGTGCTGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGGSGSW*SRCWQG
Trigger: TCCCTGCCAGCACCTGGAGCACCAACTACCACTCCC...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR CCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCCCAGGGAGTGGTAGTTaGTGCTCCAGGTGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGPGSGS*CSRCWQ
Trigger: CTGCCAGCACCTGGAGCACCAACTACCACTCCCTGG...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTCTATTTACATCAAAATaGCTTGATGGGGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSLFTSK*LDGGSG
Trigger: CCCAGAGCCCCCATCAAGTCATTTTGATGTAAATAG...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGCAGGGACAGGACAGCTaGTTGATAGAAGTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQQGQDS*LIEVRA
Trigger: AGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTG...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR GCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAGGGAGTGGTAGTTGGTaGTCCAGGTGCTGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: GRICQFSFVEKCIQAANLGSGSW*SRCWQG
Trigger: TCCCTGCCAGCACCTGGAGCACCAACTACCACTCCC...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTAAAGTTCACCCCTTGTaGATACCACTCTTTAAATCC +
Preference number: 2 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSKVHPL*IPLFKS
Trigger: GGATTTAAAGAGTGGTATTCACAAGGGGTGAACTTT...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTGTATCCCTGGCTCAGTaGCTGACCAATCACAACACG +
Preference number: 2 (lower is better)
Translates to: LVSHTETHTTRKAGYASFVSLAQ*LTNHNT
Trigger: CGTGTTGTGATTGGTCAGTCACTGAGCCAGGGATAC...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTACCTCCTCTGCCTATGTaGGCACTGAGGCAACTGCCC +
Preference number: 2 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLPPLPM*ALRQLP
Trigger: GGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGG...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCATCTTGAAATCCAGATaGTTGGGTAGAAAATGTGAC +
Preference number: 2 (lower is better)
Translates to: SSAYVGTEATALTVKVHPILKSR*LGRKCD
Trigger: GTCACATTTTCTACCCAATCATCTGGATTTCAAGAT...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGCAACACGTGCCCAGTTaGATAGTGACTGTAACAGAT +
Preference number: 2 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQQHVPS*IVTVTD
Trigger: ATCTGTTACAGTCACTATTCAACTGGGCACGTGTTG...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGGTATCCCTGGCTCAGTaGCTGACCAATCACAACACG +
Preference number: 2 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVVSLAQ*LTNHNT
Trigger: CGTGTTGTGATTGGTCAGTCACTGAGCCAGGGATAC...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCCAACACGTGCCCAGTTaGATAGTGACTGTAACAGAT +
Preference number: 2 (lower is better)
Translates to: LETPPALGLGTKQVRTVSQHVPS*IVTVTD
Trigger: ATCTGTTACAGTCACTATTCAACTGGGCACGTGTTG...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTATCTTGAAATCCAGATaGTTGGGTAGAAAATGTGAC +
Preference number: 2 (lower is better)
Translates to: TSSSAYVGTEATALTVKVILKSR*LGRKCD
Trigger: GTCACATTTTCTACCCAATCATCTGGATTTCAAGAT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTACAACACGTGCCCAGTTaGATAGTGACTGTAACAGAT +
Preference number: 2 (lower is better)
Translates to: CLETPPALGLGTKQVRTVQHVPS*IVTVTD
Trigger: ATCTGTTACAGTCACTATTCAACTGGGCACGTGTTG...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCAACACGTGCCCAGTTaGATAGTGACTGTAACAGAT +
Preference number: 2 (lower is better)
Translates to: LVSHTETHTTRKAGYASFQHVPS*IVTVTD
Trigger: ATCTGTTACAGTCACTATTCAACTGGGCACGTGTTG...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCCTATTTACATCAAAATaGCTTGATGGGGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGLFTSK*LDGGSG
Trigger: CCCAGAGCCCCCATCAAGTCATTTTGATGTAAATAG...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCTATTTACATCAAAATaGCTTGATGGGGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVLFTSK*LDGGSG
Trigger: CCCAGAGCCCCCATCAAGTCATTTTGATGTAAATAG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR CCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGGGCTCTGGGCCTCTaGGCCTTGTTAAAAGATGAT +
Preference number: 2 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEGALGL*ALLKDD
Trigger: ATCATCTTTTAACAAGGCCCAGAGGCCCAGAGCCCC...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAAAGTTCACCCCTTGTaGATACCACTCTTTAAATCC +
Preference number: 2 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGKVHPL*IPLFKS
Trigger: GGATTTAAAGAGTGGTATTCACAAGGGGTGAACTTT...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCATCTTGAAATCCAGATaGTTGGGTAGAAAATGTGAC +
Preference number: 2 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGILKSR*LGRKCD
Trigger: GTCACATTTTCTACCCAATCATCTGGATTTCAAGAT...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTATCTTGAAATCCAGATaGTTGGGTAGAAAATGTGAC +
Preference number: 2 (lower is better)
Translates to: LVSHTETHTTRKAGYASFILKSR*LGRKCD
Trigger: GTCACATTTTCTACCCAATCATCTGGATTTCAAGAT...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAAAAGTTCACCCCTTGTaGATACCACTCTTTAAATCC +
Preference number: 2 (lower is better)
Translates to: GRICQFSFVEKCIQAANLKVHPL*IPLFKS
Trigger: GGATTTAAAGAGTGGTATTCACAAGGGGTGAACTTT...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGAAACTTAATGAGGAGTaGGCAGTTTTGTCCTTAAAA +
Preference number: 2 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVKLNEE*AVLSLK
Trigger: TTTTAAGGACAAAACTGCCCACTCCTCATTAAGTTT...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAAAAGTTCACCCCTTGTaGATACCACTCTTTAAATCC +
Preference number: 2 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEKVHPL*IPLFKS
Trigger: GGATTTAAAGAGTGGTATTCACAAGGGGTGAACTTT...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR TCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCATCTTGAAATCCAGATaGTTGGGTAGAAAATGTGAC +
Preference number: 2 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSILKSR*LGRKCD
Trigger: GTCACATTTTCTACCCAATCATCTGGATTTCAAGAT...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR CAA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGCTGGGCCTCTGGGCCTaGTTAAAAGATGATGCTGAA +
Preference number: 3 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQLGLWA*LKDDAE
Trigger: TTCAGCATCATCTTTTAACAAGGCCCAGAGGCCCAG...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR CAA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTACATCAAAATGACTaGATGGGGGCTCTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQLHQND*MGALGL
Trigger: GAGGCCCAGAGCCCCCATCAAGTCATTTTGATGTAA...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR TCA 72 bp CTAAGCAAGTCCGGACTGTATCCCTGGCTCAGTGACTaGCCAATCACAACACGTGCCCAGTTGAATAGTGAC +
Preference number: 3 (lower is better)
Translates to: LSKSGLYPWLSD*PITTRAQLNSD
Trigger: GTCACTATTCAACTGGGCACGTGTTGTGATTGGTCAGTCACTGAGCCAGGGATACAGTCCGGACTTGCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR TCA 72 bp AGTTGGTGCTCCAGGTGCTGGCAGGGACAGGACAGCTaGTTGATAGAAGTGAGGGCTCTAACAAAGTTCACT +
Preference number: 3 (lower is better)
Translates to: SWCSRCWQGQDS*LIEVRALTKFT
Trigger: AGTGAACTTTGTTAGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCACCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR CAA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCTTACATCAAAATGACTaGATGGGGGCTCTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGLHQND*MGALGL
Trigger: GAGGCCCAGAGCCCCCATCAAGTCATTTTGATGTAA...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR CAA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTATTACATCAAAATGACTaGATGGGGGCTCTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: GRICQFSFVEKCIQAANLLHQND*MGALGL
Trigger: GAGGCCCAGAGCCCCCATCAAGTCATTTTGATGTAA...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
3UTR-3UTR CAA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAACAACACGTGCCCAGTaGAATAGTGACTGTAACAGA +
Preference number: 3 (lower is better)
Translates to: GRICQFSFVEKCIQAANLTTRAQ*NSDCNR
Trigger: TCTGTTACAGTCACTATTCAACTGGGCACGTGTTGT...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000513042.6
ENST00000545377.5
CDS-3UTR GCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGCGCAGCCAGCGCCGCTaGTCCTGCTGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQRSQRR*SCWSWC
Trigger: GCACCAGCTCCAGCAGGAGCAGCGGCGCTGGCTGCG...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGGCGGGCAGGCTCCTCTaGCGGCCGTGCTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQAGRLL*RPCFQW
Trigger: CCACTGGAAGCACGGCCGGCAGAGGAGCCTGCCCGC...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCGTCGCCTGCGCCCGCTaGTGCTGCTCACACCTGCGC +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPVACAR*CCSHLR
Trigger: GCGCAGGTGTGAGCAGCAGCAGCGGGCGCAGGCGAC...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTTGGCCCAGCAGGCTCTaGTGGGCCCGCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSWPSRL*WARILA
Trigger: GGCGAGGATGCGGGCCCAGCAGAGCCTGCTGGGCCA...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTGGCCCAGCAGGCTCTaGTGGGCCCGCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPWPSRL*WARILA
Trigger: GGCGAGGATGCGGGCCCAGCAGAGCCTGCTGGGCCA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCGCAGCCAGCTCTCCCTaGTCGCCTGCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPAASSP*SPAPAA
Trigger: AGCAGCGGGCGCAGGCGACCAGGGAGAGCTGGCTGC...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGGCAGCCAGCTCTCCCTaGTCGCCTGCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVAASSP*SPAPAA
Trigger: AGCAGCGGGCGCAGGCGACCAGGGAGAGCTGGCTGC...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCCCAGCAGGCTCTGCTaGGCCCGCATCCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVPSRLC*ARILAC
Trigger: GCAGGCGAGGATGCGGGCCCAGCAGAGCCTGCTGGG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTCCCGCTCCCGCTCCTaGAGCCAGCTCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVSRSRS*SQLSLV
Trigger: GACCAGGGAGAGCTGGCTGCAGGAGCGGGAGCGGGA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGGCGTCGCGAGACTTCTaGTCCTGCAAGGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQASRDF*SCKGPP
Trigger: AGGCGGCCCCTTGCAGGACCAGAAGTCTCGCGACGC...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCGCAGCCAGCGCCGCTaGTCCTGCTGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVRSQRR*SCWSWC
Trigger: GCACCAGCTCCAGCAGGAGCAGCGGCGCTGGCTGCG...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTGCAGCCAGCTCTCCCTaGTCGCCTGCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVAASSP*SPAPAA
Trigger: AGCAGCGGGCGCAGGCGACCAGGGAGAGCTGGCTGC...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTGGTACTCCTGGAGCTaGAGGTCCAGCTCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVWYSWS*RSSSPR
Trigger: CCGGGGCGAGCTGGACCTCCAGCTCCAGGAGTACCA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTTGGCCAGCTCCTCATaGTGCCTGTCCGCGTCGCGA +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPLASSS*CLSASR
Trigger: TCGCGACGCGGACAGGCAGCATGAGGAGCTGGCCAA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTGCTGCTGCTCACACCTaGGCAGCCAGCGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVAAAHT*AASAAA
Trigger: AGCAGCGGCGCTGGCTGCGCAGGTGTGAGCAGCAGC...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGGTCGCCTGCGCCCGCTaGTGCTGCTCACACCTGCGC +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQVACAR*CCSHLR
Trigger: GCGCAGGTGTGAGCAGCAGCAGCGGGCGCAGGCGAC...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGGCCCGCATCCTCGCCTaGTCCCTCTCCACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQARILA*SLSTRR
Trigger: GCGCCTGGTGGAGAGGGAGCAGGCGAGGATGCGGGC...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCTCCTCTGCCGGCCGTaGTTCCAGTGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVLLCRP*FQWPSR
Trigger: CCTGCTGGGCCACTGGAAGCACGGCCGGCAGAGGAG...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGGTCAGCAGGGTCTGGTaGCTGCAGGCTGTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVVSRVW*LQAVRR
Trigger: TCGCCTCACAGCCTGCAGCCACCAGACCCTGCTGAC...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCCTCGGAGGATAGAGTaGCCGAGAGACAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVPRRIE*PRDRPS
Trigger: GGAGGGCCTGTCTCTCGGCCACTCTATCCTCCGAGG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCACGGCGCCCATCTGTaGGGCCTTCACTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPHGAHL*GLHCNL
Trigger: CAAGTTGCAGTGAAGGCCTCACAGATGGGCGCCGTG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp ATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACACCCAGGCGAGGCTCTaGCCCCGCGCCCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: MLGRTLIHSTQEPTIQRDTQARL*PRALPE
Trigger: CTCAGGCAGGGCGCGGGGGCAGAGCCTCGCCTGGGT...GTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTAGCAGCAGCTCCTCCTaGGACTGGCACTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVSSSSS*DWHSRS
Trigger: GGAGCGGGAGTGCCAGTCGCAGGAGGAGCTGCTGCT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGCTCCTCTGCCGGCCGTaGTTCCAGTGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQLLCRP*FQWPSR
Trigger: CCTGCTGGGCCACTGGAAGCACGGCCGGCAGAGGAG...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCTGTGCTGGTACTCCTaGAGCTGGAGGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVLCWYS*SWRSSS
Trigger: CGAGCTGGACCTCCAGCTCCAGGAGTACCAGCACAG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCTGTGCTGGTACTCCTaGAGCTGGAGGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPLCWYS*SWRSSS
Trigger: CGAGCTGGACCTCCAGCTCCAGGAGTACCAGCACAG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCCAGGGAGTGGTAGTTaGTGCTCCAGGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPPGSGS*CSRCWQ
Trigger: CTGCCAGCACCTGGAGCACCAACTACCACTCCCTGG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGGTGTGTTTGCTGCTCTaGGGCCACAGAGTGCAACCT +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQVCLLL*GHRVQP
Trigger: AGGTTGCACTCTGTGGCCTCAGAGCAGCAAACACAC...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGATGTGGCTGACCTCCTaGAGCTTTCCAAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQMWLTS*SFPRWC
Trigger: GCACCACCTTGGAAAGCTTCAGGAGGTCAGCCACAT...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGGCAGACGAGCCAGCCTaGAAGCCATGTTGTCCACGT +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVADEPA*KPCCPR
Trigger: ACGTGGACAACATGGCTTGCAGGCTGGCTCGTCTGC...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGATCCAAGGCAGGCAGTaGTCCTGCCGTCAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQIQGRQ*SCRQGK
Trigger: TTTGCCTTGACGGCAGGAGCACTGCCTGCCTTGGAT...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGTCTGAGGCCACAGAGTaGAACCTCTGGATTCAGGGC +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQSEATE*NLWIQG
Trigger: GCCCTGAATCCAGAGGTTGCACTCTGTGGCCTCAGA...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGGAAGGGTGTGTTTGCTaGTCTGAGGCCACAGAGTGC +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQEGCVC*SEATEC
Trigger: GCACTCTGTGGCCTCAGAGCAGCAAACACACCCTTC...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTTTGGCCAGCTCCTCATaGTGCCTGTCCGCGTCGCGA +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVLASSS*CLSASR
Trigger: TCGCGACGCGGACAGGCAGCATGAGGAGCTGGCCAA...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCGCTGCTGCTCACACCTaGGCAGCCAGCGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSAAAHT*AASAAA
Trigger: AGCAGCGGCGCTGGCTGCGCAGGTGTGAGCAGCAGC...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACGTCGCCTGCGCCCGCTaGTGCTGCTCACACCTGCGC +
Preference number: 4 (lower is better)
Translates to: LGRTLIHSTQEPTIQRDNVACAR*CCSHLR
Trigger: GCGCAGGTGTGAGCAGCAGCAGCGGGCGCAGGCGAC...GTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTAGCCGCTCCAGGCTGTaGTGGTACTCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVSRSRL*WYSWSW
Trigger: CCAGCTCCAGGAGTACCAGCACAGCCTGGAGCGGCT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCGCGGGCAGGCTCCTCTaGCGGCCGTGCTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGAGRLL*RPCFQW
Trigger: CCACTGGAAGCACGGCCGGCAGAGGAGCCTGCCCGC...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTGCGGGCAGGCTCCTCTaGCGGCCGTGCTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFAGRLL*RPCFQW
Trigger: CCACTGGAAGCACGGCCGGCAGAGGAGCCTGCCCGC...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTGCCGTCAAGGCAAATaGGGTCAGCAGGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVCRQGK*GQQGLV
Trigger: CACCAGACCCTGCTGACCCCATTTGCCTTGACGGCA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGAGGTGGGGCTCTAGATaGACGTCCTCAAATCCGCTC +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQRWGSR*TSSNPL
Trigger: GAGCGGATTTGAGGACGTCCATCTAGAGCCCCACCT...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGGAAGCTGGTGCACATTaGCCAGCTCCTCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVEAGAH*PAPHAA
Trigger: GGCAGCATGAGGAGCTGGCCAATGTGCACCAGCTTC...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTGGTACTCCTGGAGCTaGAGGTCCAGCTCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQWYSWS*RSSSPR
Trigger: CCGGGGCGAGCTGGACCTCCAGCTCCAGGAGTACCA...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCCAGCAGGCTCTGCTaGGCCCGCATCCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFPSRLC*ARILAC
Trigger: GCAGGCGAGGATGCGGGCCCAGCAGAGCCTGCTGGG...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGGTGGCTGCAGGCTGTaGGGCGATTGGCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: PMLGRTLIHSTQEPTIQRGGCRL*GDWPAS
Trigger: TGACGCAGGCCAATCGCCTCACAGCCTGCAGCCACC...CCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGACAACTGTCCTCACATaGTTGACTCACGGCGCCCAT +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQTTVLT*LTHGAH
Trigger: ATGGGCGCCGTGAGTCAATCATGTGAGGACAGTTGT...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTCTTCTCTCCCTCCTGTaGCTAATGAGGCAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSLLSLL*LMRQSV
Trigger: CACCGACTGCCTCATTAGTCACAGGAGGGAGAGAAG...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCTGACATTCGAAGGCTaGGAAGGGTCCACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVLTFEG*EGSTLR
Trigger: CCTCAAGGTGGACCCTTCTCAGCCTTCGAATGTCAG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCTGACATTCGAAGGCTaGGAAGGGTCCACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPLTFEG*EGSTLR
Trigger: CCTCAAGGTGGACCCTTCTCAGCCTTCGAATGTCAG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCTGCCCGTAAAGAGGTaGTTCGCTGCAGCTCAACTC +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVLPVKR*FAAAQL
Trigger: GAGTTGAGCTGCAGCGAAGCACCTCTTTACGGGCAG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTGGCAGGCAGTGCTCCTaGCGTCAAGGCAAATGGGGT +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVGRQCS*RQGKWG
Trigger: ACCCCATTTGCCTTGACGGCAGGAGCACTGCCTGCC...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTCTGAGGCCACAGAGTaGAACCTCTGGATTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPSEATE*NLWIQG
Trigger: GCCCTGAATCCAGAGGTTGCACTCTGTGGCCTCAGA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTGGCCAGCTCCTCATaGTGCCTGTCCGCGTCGCGA +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQLASSS*CLSASR
Trigger: TCGCGACGCGGACAGGCAGCATGAGGAGCTGGCCAA...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCGCAGCCAGCGCCGCTaGTCCTGCTGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVRSQRR*SCWSWC
Trigger: GCACCAGCTCCAGCAGGAGCAGCGGCGCTGGCTGCG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTGCTGCTGCTCACACCTaGGCAGCCAGCGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFAAAHT*AASAAA
Trigger: AGCAGCGGCGCTGGCTGCGCAGGTGTGAGCAGCAGC...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCTCCCGCTCCCGCTCCTaGAGCCAGCTCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGSRSRS*SQLSLV
Trigger: GACCAGGGAGAGCTGGCTGCAGGAGCGGGAGCGGGA...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCCGCTCCCGCTCCTaGAGCCAGCTCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVSRSRS*SQLSLV
Trigger: GACCAGGGAGAGCTGGCTGCAGGAGCGGGAGCGGGA...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCGCCCGCATCCTCGCCTaGTCCCTCTCCACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RFIPMLGRTLIHSTQEPTARILA*SLSTRR
Trigger: GCGCCTGGTGGAGAGGGAGCAGGCGAGGATGCGGGC...GGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACGCGGGCAGGCTCCTCTaGCGGCCGTGCTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PIYSHAREDFDSLYTRANAGRLL*RPCFQW
Trigger: CCACTGGAAGCACGGCCGGCAGAGGAGCCTGCCCGC...GTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCTGAAGCCCATGGCCTaGGACGCTGGACTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVLKPMA*DAGLEN
Trigger: GTTCTCCAGTCCAGCGTCCCAGGCCATGGGCTTCAG...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCTGAGCCAGAGCCCATaGTCACCGGAGAGTAACCTT +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPLSQSP*SPESNL
Trigger: AAGGTTACTCTCCGGTGACCATGGGCTCTGGCTCAG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTCTGAGCCAGAGCCCATaGTCACCGGAGAGTAACCTT +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSLSQSP*SPESNL
Trigger: AAGGTTACTCTCCGGTGACCATGGGCTCTGGCTCAG...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGGTCAGCAGGGTCTGGTaGCTGCAGGCTGTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQVSRVW*LQAVRR
Trigger: TCGCCTCACAGCCTGCAGCCACCAGACCCTGCTGAC...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCAGAGGCAATTCCAGATaGGTCAGAGCCAGCACGAGC +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPRGNSR*VRASTS
Trigger: GCTCGTGCTGGCTCTGACCCATCTGGAATTGCCTCT...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCACTCGGGAGAAGCTTaGGGACCATCTGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVHSGEA*GPSALK
Trigger: TTTCAGGGCAGATGGTCCCCAAGCTTCTCCCGAGTG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTTATCCACGGTGCTGTaGTCCAGCTGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPLSTVL*SSCSSS
Trigger: AGAGGAGCTGCAGCTGGACCACAGCACCGTGGATAA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTAGTAATGAGGCTGCCTaGGGAGGCTCGCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVSNEAA*GGSPGS
Trigger: TGACCCAGGCGAGCCTCCCCAGGCAGCCTCATTACT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGCCTCGGAGGATAGAGTaGCCGAGAGACAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQPRRIE*PRDRPS
Trigger: GGAGGGCCTGTCTCTCGGCCACTCTATCCTCCGAGG...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTAGCTCCTCCTGCGACTaGCACTCCCGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFSSSCD*HSRSRS
Trigger: GGAGCGGGAGCGGGAGTGCCAGTCGCAGGAGGAGCT...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCTGGTACTCCTGGAGCTaGAGGTCCAGCTCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSWYSWS*RSSSPR
Trigger: CCGGGGCGAGCTGGACCTCCAGCTCCAGGAGTACCA...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCTGTGCTGGTACTCCTaGAGCTGGAGGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVLCWYS*SWRSSS
Trigger: CGAGCTGGACCTCCAGCTCCAGGAGTACCAGCACAG...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTAGGTGGCTGCAGGCTGTaGGGCGATTGGCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVGGCRL*GDWPAS
Trigger: TGACGCAGGCCAATCGCCTCACAGCCTGCAGCCACC...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGATAAACGCCTGCAGTTaGGGGCGGTGTGAATTTGAG +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQINACS*GRCEFE
Trigger: CTCAAATTCACACCGCCCTCAACTGCAGGCGTTTAT...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCGTATCCCTGGCTCAGTaGCTGACCAATCACAACACG +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPVSLAQ*LTNHNT
Trigger: CGTGTTGTGATTGGTCAGTCACTGAGCCAGGGATAC...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTCTCTTCTTCAGTTTCTaGACCGCTGGAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSLFFSF*TAGGHS
Trigger: GCTATGCCCTCCAGCGGTGCAGAAACTGAAGAAGAG...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCAAAATTCCTGTCGCTaGCAGCACAGGATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPQNSCR*QHRIPA
Trigger: GGCAGGAATCCTGTGCTGGCAGCGACAGGAATTTTG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCAAAATTCCTGTCGCTaGCAGCACAGGATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVQNSCR*QHRIPA
Trigger: GGCAGGAATCCTGTGCTGGCAGCGACAGGAATTTTG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGGCTGCTGCTCACACCTaGGCAGCCAGCGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVAAAHT*AASAAA
Trigger: AGCAGCGGCGCTGGCTGCGCAGGTGTGAGCAGCAGC...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp GTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCTGCGCCCGCTGCTGCTaGTCACACCTGCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VPIYSHAREDFDSLYTRACARCC*SHLRSQ
Trigger: CTGGCTGCGCAGGTGTGAGCAGCAGCAGCGGGCGCA...GGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTAGCAGCAGCTCCTCCTaGGACTGGCACTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFSSSSS*DWHSRS
Trigger: GGAGCGGGAGTGCCAGTCGCAGGAGGAGCTGCTGCT...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGAGTAATGAGGCTGCCTaGGGAGGCTCGCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQSNEAA*GGSPGS
Trigger: TGACCCAGGCGAGCCTCCCCAGGCAGCCTCATTACT...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGCGCTCCAGGCTGTGCTaGTACTCCTGGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PMLGRTLIHSTQEPTIQRRSRLC*YSWSWR
Trigger: CCTCCAGCTCCAGGAGTACCAGCACAGCCTGGAGCG...CCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGGGGGCTCTGGGCCTCTaGGCCTTGTTAAAAGATGAT +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVGALGL*ALLKDD
Trigger: ATCATCTTTTAACAAGGCCCAGAGGCCCAGAGCCCC...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGCCAGGGAGTGGTAGTTaGTGCTCCAGGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQPGSGS*CSRCWQ
Trigger: CTGCCAGCACCTGGAGCACCAACTACCACTCCCTGG...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTGCGCTCTGCAATCATaGCATGTCGCTGATGAGATC +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPCALQS*HVADEI
Trigger: GATCTCATCAGCGACATGTCATGATTGCAGAGCGCA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp AGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTACCGTCACCGTCTCCTaGAGCCCATGGCCTGGGACG +
Preference number: 4 (lower is better)
Translates to: REDFDSLYTRANHSEGQLTVTVS*SPWPGT
Trigger: CGTCCCAGGCCATGGGCTTCAGGAGACGGTGACGGT...AAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTAACTTGATGGTGACATaGAGGACTGCTGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSNLMVT*RTAGLQ
Trigger: CTGAAGCCCAGCAGTCCTTCATGTCACCATCAAGTT...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCGTTCCTGGGGCAAACTaGTGTCGATTCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPVPGAN*CRFSFS
Trigger: AGAGAAGCTGAATCGACATCAGTTTGCCCCAGGAAC...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTATGTGGCTGACCTCCTaGAGCTTTCCAAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVMWLTS*SFPRWC
Trigger: GCACCACCTTGGAAAGCTTCAGGAGGTCAGCCACAT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCTGACATTCGAAGGCTaGGAAGGGTCCACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVLTFEG*EGSTLR
Trigger: CCTCAAGGTGGACCCTTCTCAGCCTTCGAATGTCAG...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCATAAACGCCTGCAGTTaGGGGCGGTGTGAATTTGAG +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPINACS*GRCEFE
Trigger: CTCAAATTCACACCGCCCTCAACTGCAGGCGTTTAT...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGACCCAGGCGAGGCTCTaGCCCCGCGCCCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMTQARL*PRALPE
Trigger: CTCAGGCAGGGCGCGGGGGCAGAGCCTCGCCTGGGT...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545377.5
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCTGCCCGTAAAGAGGTaGTTCGCTGCAGCTCAACTC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVLPVKR*FAAAQL
Trigger: GAGTTGAGCTGCAGCGAAGCACCTCTTTACGGGCAG...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGGCAGACGAGCCAGCCTaGAAGCCATGTTGTCCACGT +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQADEPA*KPCCPR
Trigger: ACGTGGACAACATGGCTTGCAGGCTGGCTCGTCTGC...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCGTGAGGCGATTGGCCTaGGTCACCAGCAGACGAGCC +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGVRRLA*VTSRRA
Trigger: GGCTCGTCTGCTGGTGACGCAGGCCAATCGCCTCAC...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp CCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGGCAGGCAGTGCTCCTaGCGTCAAGGCAAATGGGGT +
Preference number: 4 (lower is better)
Translates to: PMLGRTLIHSTQEPTIQRGRQCS*RQGKWG
Trigger: ACCCCATTTGCCTTGACGGCAGGAGCACTGCCTGCC...CCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTATCCAAGGCAGGCAGTaGTCCTGCCGTCAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVIQGRQ*SCRQGK
Trigger: TTTGCCTTGACGGCAGGAGCACTGCCTGCCTTGGAT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTTCTGAGGCCACAGAGTaGAACCTCTGGATTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVSEATE*NLWIQG
Trigger: GCCCTGAATCCAGAGGTTGCACTCTGTGGCCTCAGA...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCTGGGCTTCAGTGTGTaGTGTCCCTTCGACATTTTC +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPLGFSV*CPFDIF
Trigger: GAAAATGTCGAAGGGACAGCACACACTGAAGCCCAG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCAGCTTTCCAAGGTGGTaGCTGGAACACTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPSFPRW*LEHFWT
Trigger: TGTCCAGAAGTGTTCCAGGCACCACCTTGGAAAGCT...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCAACTTTCTACAGCCTaGTGGATCCGTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVQLSTA*WIRLIQ
Trigger: CTGGATGAGACGGATCCAGCAGGCTGTAGAAAGTTG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp GATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTCGCAGCCAGCGCCGCTaGTCCTGCTGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: DSLYTRANHSEGQLLVQTRSQRR*SCWSWC
Trigger: GCACCAGCTCCAGCAGGAGCAGCGGCGCTGGCTGCG...AGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp AGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGCTCTCCCTGGTCGCCTaGGCCCGCTGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RTLIHSTQEPTIQRDNFLLSLVA*ARCCCS
Trigger: TGAGCAGCAGCAGCGGGCGCAGGCGACCAGGGAGAG...CAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACAGCAGCAGCTCCTCCTaGGACTGGCACTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PIYSHAREDFDSLYTRANSSSSS*DWHSRS
Trigger: GGAGCGGGAGTGCCAGTCGCAGGAGGAGCTGCTGCT...GTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGAGCAGCAGCTCCTCCTaGGACTGGCACTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVSSSSS*DWHSRS
Trigger: GGAGCGGGAGTGCCAGTCGCAGGAGGAGCTGCTGCT...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCCGCTCCAGGCTGTaGTGGTACTCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGSRSRL*WYSWSW
Trigger: CCAGCTCCAGGAGTACCAGCACAGCCTGGAGCGGCT...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTAGCCGCTCCAGGCTGTaGTGGTACTCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFSRSRL*WYSWSW
Trigger: CCAGCTCCAGGAGTACCAGCACAGCCTGGAGCGGCT...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCTCGCATCTGGAGCGATaGCCCCGCAGCCTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGSHLER*PRSLQN
Trigger: GTTCTGGAGGCTGCGGGGCCATCGCTCCAGATGCGA...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTACATGGCTTTCGCATCTaGAGCGATGGCCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVHGFRI*SDGPAA
Trigger: GGCTGCGGGGCCATCGCTCCAGATGCGAAAGCCATG...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545377.5
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTTGGCACCCTCTTCGTTaGGTAAAGCCAAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVWHPLR*VKPRPG
Trigger: TCCAGGCCTTGGCTTTACCCAACGAAGAGGGTGCCA...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTAAATGCTCGGCTGTGTaGTTCAGGGTCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVKCSAV*FRVRVS
Trigger: GCTGACCCTGACCCTGAACCACACAGCCGAGCATTT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCTCTGGCCTGGCTTCTaGCTCAAAGGCCTTGACAAG +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVLWPGF*LKGLDK
Trigger: CTTGTCAAGGCCTTTGAGCCAGAAGCCAGGCCAGAG...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTTCCAAGGTGGTGCCTaGAACACTTCTGGACAATGG +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVFQGGA*NTSGQW
Trigger: CCATTGTCCAGAAGTGTTCCAGGCACCACCTTGGAA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTTCCAAGGTGGTGCCTaGAACACTTCTGGACAATGG +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPFQGGA*NTSGQW
Trigger: CCATTGTCCAGAAGTGTTCCAGGCACCACCTTGGAA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGCTTCTGCAGCTGTTATaGTCACTCTCAGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQLLQLL*SLSDSK
Trigger: CTTGGAGTCTGAGAGTGACCATAACAGCTGCAGAAG...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTCTGCTTCAAACTCCTaGGCATCACTGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVSASNS*ASLLRS
Trigger: TGACCTCAGCAGTGATGCCCAGGAGTTTGAAGCAGA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCAACAGAATGCATTCTaGAATTCCTCGGCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPQQNAF*NSSASS
Trigger: GCTCGACGCCGAGGAATTCCAGAATGCATTCTGTTG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAAGCTCCTCCTGCGACTaGCACTCCCGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLSSSCD*HSRSRS
Trigger: GGAGCGGGAGCGGGAGTGCCAGTCGCAGGAGGAGCT...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CATCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAACCCAGCAGGCTCTGCTaGGCCCGCATCCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: HQYRFIPMLGRTLIHSTQPSRLC*ARILAC
Trigger: GCAGGCGAGGATGCGGGCCCAGCAGAGCCTGCTGGG...TTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTGTCCACGTAGGTCACTaGGCCAGAGCCCATGGTCAC +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFVHVGH*ARAHGH
Trigger: GTGACCATGGGCTCTGGCTCAGTGACCTACGTGGAC...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCGGTCAGCGTTTCCGATaGGTGAATGTAATGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPGQRFR*VNVMQG
Trigger: TCCTTGCATTACATTCACTCATCGGAAACGCTGACC...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGGAACCACCAGGCTTTTaGCACGCTTTATATCTTCCT +
Preference number: 4 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQEPPGF*HALYLP
Trigger: AGGAAGATATAAAGCGTGTCAAAAGCCTGGTGGTTC...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGGTGTGTTTGCTGCTCTaGGGCCACAGAGTGCAACCT +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQVCLLL*GHRVQP
Trigger: AGGTTGCACTCTGTGGCCTCAGAGCAGCAAACACAC...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGGCAAGAATAAGAACGTaGGCGAACTCCAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVARIRT*ANSRKQ
Trigger: CTGCTTTCTGGAGTTCGCTCACGTTCTTATTCTTGC...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCCCTGGGCATCACTGCTaGGGTCACTCCACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSPGHHC*GHSTEK
Trigger: CTTCTCTGTGGAGTGACCTCAGCAGTGATGCCCAGG...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTCTCAGGACCAGCAGATaGAGCACTGATCAGAAACAT +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSLRTSR*STDQKH
Trigger: ATGTTTCTGATCAGTGCTTCATCTGCTGGTCCTGAG...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGATGGTCAAGGCGGCCTaGAGGCTGTATAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQMVKAA*RLYKRR
Trigger: CCGTCTCTTATACAGCCTTCAGGCCGCCTTGACCAT...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTGGAAAGGAAGTATCTaGTGGCCGGAACCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQWKGSI*WPEPAA
Trigger: AGCCGCTGGTTCCGGCCATCAGATACTTCCTTTCCA...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTGGGATGGCTCAGAATaGCCTTCCCCTTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQWDGSE*PSPSLS
Trigger: CGACAGTGAAGGGGAAGGGCATTCTGAGCCATCCCA...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCTTGGAATTTCTTGGTaGATGCAGGCGCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVLGISW*MQAQHL
Trigger: AAGATGCTGCGCCTGCATGCACCAAGAAATTCCAAG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp GTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCGACAGGCCCTCCTGCTaGTGGAGAACCAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VPIYSHAREDFDSLYTRADRPSC*WRTSLW
Trigger: CCACAGGCTGGTTCTCCAGCAGCAGGAGGGCCTGTC...GGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGGACAGGCCCTCCTGCTaGTGGAGAACCAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVDRPSC*WRTSLW
Trigger: CCACAGGCTGGTTCTCCAGCAGCAGGAGGGCCTGTC...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAGCCAGCTCCTCATGCTaGCTGTCCGCGTCGCGAGAC +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLASSSC*LSASRD
Trigger: GTCTCGCGACGCGGACAGGCAGCATGAGGAGCTGGC...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACGCTGCTGCTCACACCTaGGCAGCCAGCGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HSTQEPTIQRDNFLFKLYAAAHT*AASAAA
Trigger: AGCAGCGGCGCTGGCTGCGCAGGTGTGAGCAGCAGC...GTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTACTCTCCCTGGTCGCCTaGGCCCGCTGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLLSLVA*ARCCCS
Trigger: TGAGCAGCAGCAGCGGGCGCAGGCGACCAGGGAGAG...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCTCTCCCTGGTCGCCTaGGCCCGCTGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHLSLVA*ARCCCS
Trigger: TGAGCAGCAGCAGCGGGCGCAGGCGACCAGGGAGAG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGCCCGCATCCTCGCCTaGTCCCTCTCCACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMARILA*SLSTRR
Trigger: GCGCCTGGTGGAGAGGGAGCAGGCGAGGATGCGGGC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAATGGCCCAGCAGGCTCTaGTGGGCCCGCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: LIHSTQEPTIQRDNFLFKWPSRL*WARILA
Trigger: GGCGAGGATGCGGGCCCAGCAGAGCCTGCTGGGCCA...TTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGTGGCCCAGCAGGCTCTaGTGGGCCCGCATCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMWPSRL*WARILA
Trigger: GGCGAGGATGCGGGCCCAGCAGAGCCTGCTGGGCCA...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGCGGGCAGGCTCCTCTaGCGGCCGTGCTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMAGRLL*RPCFQW
Trigger: CCACTGGAAGCACGGCCGGCAGAGGAGCCTGCCCGC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAGACACAAGAAGAACTaGGAAAGTTTAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVRHKKN*ESLARP
Trigger: GGGCCTGGCTAAACTTTCCCAGTTCTTCTTGTGTCT...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTAGACACAAGAAGAACTaGGAAAGTTTAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSRHKKN*ESLARP
Trigger: GGGCCTGGCTAAACTTTCCCAGTTCTTCTTGTGTCT...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCTAAGTCTAATGGTGTaGCACCCTCTTCGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPLSLMV*HPLRWV
Trigger: TACCCAACGAAGAGGGTGCCACACCATTAGACTTAG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTGACATGAAGGACTGCTaGGCTTCAGTGTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVDMKDC*ASVCAV
Trigger: GACAGCACACACTGAAGCCCAGCAGTCCTTCATGTC...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTTCTCTTGGAATTTCTTaGTGCATGCAGGCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSSLGIS*CMQAQH
Trigger: ATGCTGCGCCTGCATGCACCAAGAAATTCCAAGAGA...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTCTCTTGGAATTTCTTaGTGCATGCAGGCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVSLGIS*CMQAQH
Trigger: ATGCTGCGCCTGCATGCACCAAGAAATTCCAAGAGA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCTTCTGGACAATGGATaGACCTGTCCCACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVLLDNG*TCPTVS
Trigger: GGAGACTGTGGGACAGGTCCATCCATTGTCCAGAAG...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCTTCTGCAGCTGTTATaGTCACTCTCAGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVLLQLL*SLSDSK
Trigger: CTTGGAGTCTGAGAGTGACCATAACAGCTGCAGAAG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCTTTCTACAGCCTGCTaGATCCGTCTCATCCAGTTA +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPLSTAC*IRLIQL
Trigger: TAACTGGATGAGACGGATCCAGCAGGCTGTAGAAAG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATGCAGCCAGCTCTCCCTaGTCGCCTGCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LHKSQPFRGTTSCSNYTDAASSP*SPAPAA
Trigger: AGCAGCGGGCGCAGGCGACCAGGGAGAGCTGGCTGC...ATCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGCAGCCAGCTCTCCCTaGTCGCCTGCGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEAASSP*SPAPAA
Trigger: AGCAGCGGGCGCAGGCGACCAGGGAGAGCTGGCTGC...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCATGGTACTCCTGGAGCTaGAGGTCCAGCTCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: YRFIPMLGRTLIHSTQEPWYSWS*RSSSPR
Trigger: CCGGGGCGAGCTGGACCTCCAGCTCCAGGAGTACCA...TGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCGCTCCAGGCTGTGCTaGTACTCCTGGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVRSRLC*YSWSWR
Trigger: CCTCCAGCTCCAGGAGTACCAGCACAGCCTGGAGCG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAACCCAGCAGGCTCTGCTaGGCCCGCATCCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEPSRLC*ARILAC
Trigger: GCAGGCGAGGATGCGGGCCCAGCAGAGCCTGCTGGG...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTCCTCTGCCTATGTaGGCACTGAGGCAACTGCCC +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFPPLPM*ALRQLP
Trigger: GGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGG...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp GTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCGTCCACGTAGGTCACTaGGCCAGAGCCCATGGTCAC +
Preference number: 4 (lower is better)
Translates to: VPIYSHAREDFDSLYTRAVHVGH*ARAHGH
Trigger: GTGACCATGGGCTCTGGCTCAGTGACCTACGTGGAC...GGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAGGTGGCTGCAGGCTGTaGGGCGATTGGCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLGGCRL*GDWPAS
Trigger: TGACGCAGGCCAATCGCCTCACAGCCTGCAGCCACC...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCAGGAATCCCAGTTCTTaGGGAGCTCTGAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSRNPSS*GALRPW
Trigger: CCAGGGTCTCAGAGCTCCTCAAGAACTGGGATTCCT...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTGTTCCTGGGGCAAACTaGTGTCGATTCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVVPGAN*CRFSFS
Trigger: AGAGAAGCTGAATCGACATCAGTTTGCCCCAGGAAC...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAACAGGGTCTGGATGTaGTGCATCTCTGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVNRVWM*CISVCI
Trigger: AATGCAAACAGAGATGCATCACATCCAGACCCTGTT...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACTGCTGGAGCTGGTGCTaGAGCTGGTGCACATTGGCC +
Preference number: 4 (lower is better)
Translates to: PIYSHAREDFDSLYTRANCWSWC*SWCTLA
Trigger: GGCCAATGTGCACCAGCTTCAGCACCAGCTCCAGCA...GTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGGGTGACATGAAGGACTaGTGGGCTTCAGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQGDMKD*WASVCA
Trigger: AGCACACACTGAAGCCCAGCAGTCCTTCATGTCACC...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCAACTTTCTACAGCCTaGTGGATCCGTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVQLSTA*WIRLIQ
Trigger: CTGGATGAGACGGATCCAGCAGGCTGTAGAAAGTTG...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGTTCCACCTTCTCCCCTaGATCAGAGACGGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PMLGRTLIHSTQEPTIQRFHLLP*IRDGQV
Trigger: GACTTGGCCGTCTCTGATGCAGGGGAGAAGGTGGAA...CCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAGCTCCTCATGCTaGCTGTCCGCGTCGCGAGAC +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRASSSC*LSASRD
Trigger: GTCTCGCGACGCGGACAGGCAGCATGAGGAGCTGGC...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCCGCAGCCAGCGCCGCTaGTCCTGCTGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSRSQRR*SCWSWC
Trigger: GCACCAGCTCCAGCAGGAGCAGCGGCGCTGGCTGCG...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAATGCGCCCGCTGCTGCTaGTCACACCTGCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSECARCC*SHLRSQ
Trigger: CTGGCTGCGCAGGTGTGAGCAGCAGCAGCGGGCGCA...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTGCGCCCGCTGCTGCTaGTCACACCTGCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMCARCC*SHLRSQ
Trigger: CTGGCTGCGCAGGTGTGAGCAGCAGCAGCGGGCGCA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCGTCGCCTGCGCCCGCTaGTGCTGCTCACACCTGCGC +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSVACAR*CCSHLR
Trigger: GCGCAGGTGTGAGCAGCAGCAGCGGGCGCAGGCGAC...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCTCCCTGGTCGCCTaGGCCCGCTGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMLSLVA*ARCCCS
Trigger: TGAGCAGCAGCAGCGGGCGCAGGCGACCAGGGAGAG...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAACTCTCCCTGGTCGCCTaGGCCCGCTGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSELSLVA*ARCCCS
Trigger: TGAGCAGCAGCAGCGGGCGCAGGCGACCAGGGAGAG...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAATCCCGCTCCCGCTCCTaGAGCCAGCTCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LIHSTQEPTIQRDNFLFKSRSRS*SQLSLV
Trigger: GACCAGGGAGAGCTGGCTGCAGGAGCGGGAGCGGGA...TTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGGCCCGCATCCTCGCCTaGTCCCTCTCCACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMARILA*SLSTRR
Trigger: GCGCCTGGTGGAGAGGGAGCAGGCGAGGATGCGGGC...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATCTCCTCTGCCGGCCGTaGTTCCAGTGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LHKSQPFRGTTSCSNYTDLLCRP*FQWPSR
Trigger: CCTGCTGGGCCACTGGAAGCACGGCCGGCAGAGGAG...ATCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTCGCATCTGGAGCGATaGCCCCGCAGCCTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RTLIHSTQEPTIQRDNFLSHLER*PRSLQN
Trigger: GTTCTGGAGGCTGCGGGGCCATCGCTCCAGATGCGA...CAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCTGAAGCCCATGGCCTaGGACGCTGGACTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVLKPMA*DAGLEN
Trigger: GTTCTCCAGTCCAGCGTCCCAGGCCATGGGCTTCAG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAGTCAGCAGGGTCTGGTaGCTGCAGGCTGTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLVSRVW*LQAVRR
Trigger: TCGCCTCACAGCCTGCAGCCACCAGACCCTGCTGAC...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGGTAACAGATGTGGGATaGCTCAGAATGCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQVTDVG*LRMPFP
Trigger: GGGGAAGGGCATTCTGAGCCATCCCACATCTGTTAC...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGCTTCTGGACAATGGATaGACCTGTCCCACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQLLDNG*TCPTVS
Trigger: GGAGACTGTGGGACAGGTCCATCCATTGTCCAGAAG...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTGACATTGCTGAATTTTaGCCACTCTGGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSDIAEF*PLWLQL
Trigger: AAGCTGAAGCCAGAGTGGCCAAAATTCAGCAATGTC...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTGGTTTAATAAGGAGGTaGGGCTCTAGATGGACGTCC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVGLIRR*GSRWTS
Trigger: GGACGTCCATCTAGAGCCCCACCTCCTTATTAAACC...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTTCGGTTACCACACCCTaGATCCCGGGATCCACATCC +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFSVTTP*IPGSTS
Trigger: GGATGTGGATCCCGGGATCCAGGGTGTGGTAACCGA...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTTGTGGCTGTCCTGAATaGTCAAGGCGGCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFCGCPE*SRRPEG
Trigger: GCCTTCAGGCCGCCTTGACCATTCAGGACAGCCACA...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATGTGGCTGTCCTGAATaGTCAAGGCGGCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVCGCPE*SRRPEG
Trigger: GCCTTCAGGCCGCCTTGACCATTCAGGACAGCCACA...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAGCGTCGCGAGACTTCTaGTCCTGCAAGGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLASRDF*SCKGPP
Trigger: AGGCGGCCCCTTGCAGGACCAGAAGTCTCGCGACGC...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATAGCTCCTCCTGCGACTaGCACTCCCGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LHKSQPFRGTTSCSNYTDSSSCD*HSRSRS
Trigger: GGAGCGGGAGCGGGAGTGCCAGTCGCAGGAGGAGCT...ATCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCCCAGCAGGCTCTGCTaGGCCCGCATCCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMPSRLC*ARILAC
Trigger: GCAGGCGAGGATGCGGGCCCAGCAGAGCCTGCTGGG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTTTCCCCATCTTGTCTaGTCATTGTCCTTGTCGGTA +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVFPHLV*SLSLSV
Trigger: TACCGACAAGGACAATGACCAGACAAGATGGGGAAA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCCTCCTCTGCCTATGTaGGCACTGAGGCAACTGCCC +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVPPLPM*ALRQLP
Trigger: GGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCGGGGACCATCTGCCCTaGAAATTTGTGACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSGDHLP*KFVTSS
Trigger: GGAAGACGTCACAAATTTTCAGGGCAGATGGTCCCC...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp GGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTCCATTCAGCATGTCTaGAAGCCGGCCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GRTLIHSTQEPTIQRDNFSIQHV*KPACSK
Trigger: CTTGCTGCAGGCCGGCTTTCAGACATGCTGAATGGA...GAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCTCAGGACCAGCAGATaGAGCACTGATCAGAAACAT +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVLRTSR*STDQKH
Trigger: ATGTTTCTGATCAGTGCTTCATCTGCTGGTCCTGAG...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp AGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGCACGGCGCCCATCTGTaGGGCCTTCACTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: RTLIHSTQEPTIQRDNFLHGAHL*GLHCNL
Trigger: CAAGTTGCAGTGAAGGCCTCACAGATGGGCGCCGTG...CAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCCTGTCCTCACATGATTaGCTCACGGCGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGLSSHD*LTAPIC
Trigger: ACAGATGGGCGCCGTGAGTCAATCATGTGAGGACAG...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp CCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGATCCTGGTACATCATaGGAACTGAGTGTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: PMLGRTLIHSTQEPTIQRDPGTS*ELSVSA
Trigger: GGCGGACACACTCAGTTCTCATGATGTACCAGGATC...CCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCTGACATTCGAAGGCTaGGAAGGGTCCACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFLTFEG*EGSTLR
Trigger: CCTCAAGGTGGACCCTTCTCAGCCTTCGAATGTCAG...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCGTATCCCTGGCTCAGTaGCTGACCAATCACAACACG +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSVSLAQ*LTNHNT
Trigger: CGTGTTGTGATTGGTCAGTCACTGAGCCAGGGATAC...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp GATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTGTGAGGCGATTGGCCTaGGTCACCAGCAGACGAGCC +
Preference number: 4 (lower is better)
Translates to: DSLYTRANHSEGQLLVQTVRRLA*VTSRRA
Trigger: GGCTCGTCTGCTGGTGACGCAGGCCAATCGCCTCAC...AGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAGGCAGGCAGTGCTCCTaGCGTCAAGGCAAATGGGGT +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLGRQCS*RQGKWG
Trigger: ACCCCATTTGCCTTGACGGCAGGAGCACTGCCTGCC...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTAATCCAAGGCAGGCAGTaGTCCTGCCGTCAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVIQGRQ*SCRQGK
Trigger: TTTGCCTTGACGGCAGGAGCACTGCCTGCCTTGGAT...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp CCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGCTCTTCTTCAGTTTCTaGACCGCTGGAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: PMLGRTLIHSTQEPTIQRLFFSF*TAGGHS
Trigger: GCTATGCCCTCCAGCGGTGCAGAAACTGAAGAAGAG...CCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCCTCTTCTTCAGTTTCTaGACCGCTGGAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSLFFSF*TAGGHS
Trigger: GCTATGCCCTCCAGCGGTGCAGAAACTGAAGAAGAG...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTCCAAATCTAGGCTGTaGTGGTCTTCATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPSKSRL*WSSCSL
Trigger: CAATGAACATGAAGACCAGCACAGCCTAGATTTGGA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp CTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACGAAGGGTGTGTTTGCTaGTCTGAGGCCACAGAGTGC +
Preference number: 4 (lower is better)
Translates to: LGRTLIHSTQEPTIQRDNEGCVC*SEATEC
Trigger: GCACTCTGTGGCCTCAGAGCAGCAAACACACCCTTC...GTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGGTGACATGAAGGACTaGTGGGCTTCAGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: PMLGRTLIHSTQEPTIQRGDMKD*WASVCA
Trigger: AGCACACACTGAAGCCCAGCAGTCCTTCATGTCACC...CCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp GGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTGGGATGGCTCAGAATaGCCTTCCCCTTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: GRTLIHSTQEPTIQRDNFWDGSE*PSPSLS
Trigger: CGACAGTGAAGGGGAAGGGCATTCTGAGCCATCCCA...GAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTTCACAAACCAAACACTaGAGAACCCCAGAGAATGTT +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSSQTKH*RTPENV
Trigger: AACATTCTCTGGGGTTCTGCAGTGTTTGGTTTGTGA...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTTTCCACCTTCTCCCCTaGATCAGAGACGGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFFHLLP*IRDGQV
Trigger: GACTTGGCCGTCTCTGATGCAGGGGAGAAGGTGGAA...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAGACAGGCCCTCCTGCTaGTGGAGAACCAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLDRPSC*WRTSLW
Trigger: CCACAGGCTGGTTCTCCAGCAGCAGGAGGGCCTGTC...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGCCAGCTCCTCATGCTaGCTGTCCGCGTCGCGAGAC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMASSSC*LSASRD
Trigger: GTCTCGCGACGCGGACAGGCAGCATGAGGAGCTGGC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGGCCAGCTCCTCATGCTaGCTGTCCGCGTCGCGAGAC +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMASSSC*LSASRD
Trigger: GTCTCGCGACGCGGACAGGCAGCATGAGGAGCTGGC...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TCATCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACATTGGCCAGCTCCTCATaGTGCCTGTCCGCGTCGCGA +
Preference number: 4 (lower is better)
Translates to: SSVPIYSHAREDFDSLYTLASSS*CLSASR
Trigger: TCGCGACGCGGACAGGCAGCATGAGGAGCTGGCCAA...TGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGTGCGCCCGCTGCTGCTaGTCACACCTGCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMCARCC*SHLRSQ
Trigger: CTGGCTGCGCAGGTGTGAGCAGCAGCAGCGGGCGCA...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGTCCCGCTCCCGCTCCTaGAGCCAGCTCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMSRSRS*SQLSLV
Trigger: GACCAGGGAGAGCTGGCTGCAGGAGCGGGAGCGGGA...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATAGCCGCTCCAGGCTGTaGTGGTACTCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHSRSRL*WYSWSW
Trigger: CCAGCTCCAGGAGTACCAGCACAGCCTGGAGCGGCT...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCCTCCTCTGCCGGCCGTaGTTCCAGTGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSLLCRP*FQWPSR
Trigger: CCTGCTGGGCCACTGGAAGCACGGCCGGCAGAGGAG...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCCCTGGGACGCTGGACTaGAGAACGTTATCCTCGATG +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGPGTLD*RTLSSM
Trigger: CATCGAGGATAACGTTCTCCAGTCCAGCGTCCCAGG...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGTCAGCAGGGTCTGGTaGCTGCAGGCTGTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRVSRVW*LQAVRR
Trigger: TCGCCTCACAGCCTGCAGCCACCAGACCCTGCTGAC...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTGCCGTCAAGGCAAATaGGGTCAGCAGGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVCRQGK*GQQGLV
Trigger: CACCAGACCCTGCTGACCCCATTTGCCTTGACGGCA...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATGGCACCCTCTTCGTTaGGTAAAGCCAAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVWHPLR*VKPRPG
Trigger: TCCAGGCCTTGGCTTTACCCAACGAAGAGGGTGCCA...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCTCTGGCCTGGCTTCTaGCTCAAAGGCCTTGACAAG +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFLWPGF*LKGLDK
Trigger: CTTGTCAAGGCCTTTGAGCCAGAAGCCAGGCCAGAG...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTACTCTGGCCTGGCTTCTaGCTCAAAGGCCTTGACAAG +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVLWPGF*LKGLDK
Trigger: CTTGTCAAGGCCTTTGAGCCAGAAGCCAGGCCAGAG...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCAGGGAGAAGAGCCCATaGACTGTAGCAGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSREKSP*TVAAHQ
Trigger: CTGATGAGCTGCTACAGTCCATGGGCTCTTCTCCCT...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCTGGGGAGGCTCGCCTaGGTCAGGTTTAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFLGRLA*VRFNKE
Trigger: CTCCTTATTAAACCTGACCCAGGCGAGCCTCCCCAG...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAAGTAATGAGGCTGCCTaGGGAGGCTCGCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLSNEAA*GGSPGS
Trigger: TGACCCAGGCGAGCCTCCCCAGGCAGCCTCATTACT...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACTGTGGCTGTCCTGAATaGTCAAGGCGGCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PIYSHAREDFDSLYTRANCGCPE*SRRPEG
Trigger: GCCTTCAGGCCGCCTTGACCATTCAGGACAGCCACA...GTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGACCTCGGAGGATAGAGTaGCCGAGAGACAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRPRRIE*PRDRPS
Trigger: GGAGGGCCTGTCTCTCGGCCACTCTATCCTCCGAGG...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTACCTCGGAGGATAGAGTaGCCGAGAGACAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLPRRIE*PRDRPS
Trigger: GGAGGGCCTGTCTCTCGGCCACTCTATCCTCCGAGG...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATGCGTCGCGAGACTTCTaGTCCTGCAAGGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LHKSQPFRGTTSCSNYTDASRDF*SCKGPP
Trigger: AGGCGGCCCCTTGCAGGACCAGAAGTCTCGCGACGC...ATCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGGAAGCTGGTGCACATTaGCCAGCTCCTCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVEAGAH*PAPHAA
Trigger: GGCAGCATGAGGAGCTGGCCAATGTGCACCAGCTTC...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCTCCTCCTGCGACTaGCACTCCCGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMSSSCD*HSRSRS
Trigger: GGAGCGGGAGCGGGAGTGCCAGTCGCAGGAGGAGCT...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTGTGAATTTGAGTCATaGGGGGTTGGGGACTCAGTG +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQCEFES*GVGDSV
Trigger: CACTGAGTCCCCAACCCCCCATGACTCAAATTCACA...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCTGCGCTCTGCAATCATaGCATGTCGCTGATGAGATC +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSCALQS*HVADEI
Trigger: GATCTCATCAGCGACATGTCATGATTGCAGAGCGCA...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCGGTGGCTGCAGGCTGTaGGGCGATTGGCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSGGCRL*GDWPAS
Trigger: TGACGCAGGCCAATCGCCTCACAGCCTGCAGCCACC...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTAGGGGACCATCTGCCCTaGAAATTTGTGACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVGDHLP*KFVTSS
Trigger: GGAAGACGTCACAAATTTTCAGGGCAGATGGTCCCC...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTGAACCACCAGGCTTTTaGCACGCTTTATATCTTCCT +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVEPPGF*HALYLP
Trigger: AGGAAGATATAAAGCGTGTCAAAAGCCTGGTGGTTC...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTCCAAATCACCAACCTaGTCAATCACCATACAGTTA +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPSKSPT*SITIQL
Trigger: TAACTGTATGGTGATTGATCAGGTTGGTGATTTGGA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp GTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCGTGTGTTTGCTGCTCTaGGGCCACAGAGTGCAACCT +
Preference number: 4 (lower is better)
Translates to: VPIYSHAREDFDSLYTRAVCLLL*GHRVQP
Trigger: AGGTTGCACTCTGTGGCCTCAGAGCAGCAAACACAC...GGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTCTTGCTTTTTGTCTTTaGTTTATTCCGAGGGCTAGT +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSLAFCL*FIPRAS
Trigger: ACTAGCCCTCGGAATAAATCAAAGACAAAAAGCAAG...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTGGGATGTCTCTAAATaGAGAATTTCCAAGGATGGT +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVWDVSK*RISKDG
Trigger: ACCATCCTTGGAAATTCTTCATTTAGAGACATCCCA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCTCCAAGGATGTGGCTaGCCTCCTGAAGCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFLQGCG*PPEAFQ
Trigger: TTGGAAAGCTTCAGGAGGTCAGCCACATCCTTGGAG...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTAGCAGCTCATCAGAATaGGACCTGCTTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFSSSSE*DLLLQL
Trigger: CAGCTGCAGAAGCAGGTCTCATTCTGATGAGCTGCT...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTACCTGGGCATCACTGCTaGGGTCACTCCACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLPGHHC*GHSTEK
Trigger: CTTCTCTGTGGAGTGACCTCAGCAGTGATGCCCAGG...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTAACAGGGTCTGGATGTaGTGCATCTCTGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVNRVWM*CISVCI
Trigger: AATGCAAACAGAGATGCATCACATCCAGACCCTGTT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCTAGCAATAAGCTTTTaGAGGGAAATAACTGATGGC +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVLAISF*REITDG
Trigger: GCCATCAGTTATTTCCCTTCAAAAGCTTATTGCTAG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp GGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCACAACTGTCCTCACATaGTTGACTCACGGCGCCCAT +
Preference number: 4 (lower is better)
Translates to: GRTLIHSTQEPTIQRDNFTTVLT*LTHGAH
Trigger: ATGGGCGCCGTGAGTCAATCATGTGAGGACAGTTGT...GAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTAGATCCTGGTACATCATaGGAACTGAGTGTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVDPGTS*ELSVSA
Trigger: GGCGGACACACTCAGTTCTCATGATGTACCAGGATC...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATTGCTGGAGCTGGTGCTaGAGCTGGTGCACATTGGCC +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHCWSWC*SWCTLA
Trigger: GGCCAATGTGCACCAGCTTCAGCACCAGCTCCAGCA...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCTGACATTCGAAGGCTaGGAAGGGTCCACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PIYSHAREDFDSLYTRANLTFEG*EGSTLR
Trigger: CCTCAAGGTGGACCCTTCTCAGCCTTCGAATGTCAG...GTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCCAGGGACAGGACAGCTaGTTGATAGAAGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGQGQDS*LIEVRA
Trigger: AGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTG...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCCTGCCCGTAAAGAGGTaGTTCGCTGCAGCTCAACTC +
Preference number: 4 (lower is better)
Translates to: RFIPMLGRTLIHSTQEPTLPVKR*FAAAQL
Trigger: GAGTTGAGCTGCAGCGAAGCACCTCTTTACGGGCAG...GGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGTGAGGCGATTGGCCTaGGTCACCAGCAGACGAGCC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMVRRLA*VTSRRA
Trigger: GGCTCGTCTGCTGGTGACGCAGGCCAATCGCCTCAC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATGGCAGGCAGTGCTCCTaGCGTCAAGGCAAATGGGGT +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHGRQCS*RQGKWG
Trigger: ACCCCATTTGCCTTGACGGCAGGAGCACTGCCTGCC...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp GTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCATCCAAGGCAGGCAGTaGTCCTGCCGTCAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VPIYSHAREDFDSLYTRAIQGRQ*SCRQGK
Trigger: TTTGCCTTGACGGCAGGAGCACTGCCTGCCTTGGAT...GGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGGAAGGGTGTGTTTGCTaGTCTGAGGCCACAGAGTGC +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVEGCVC*SEATEC
Trigger: GCACTCTGTGGCCTCAGAGCAGCAAACACACCCTTC...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp CCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGAGCTTTCCAAGGTGGTaGCTGGAACACTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: PMLGRTLIHSTQEPTIQRSFPRW*LEHFWT
Trigger: TGTCCAGAAGTGTTCCAGGCACCACCTTGGAAAGCT...CCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTAATGAGACCTGCTTCTaGAGCTGTTATGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVNETCF*SCYGHS
Trigger: AGAGTGACCATAACAGCTGCAGAAGCAGGTCTCATT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTAAGACTCCAAGATTCTaGTTCAAACTCCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVKTPRF*FKLLGI
Trigger: GATGCCCAGGAGTTTGAAGCAGAATCTTGGAGTCTT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCATGACATCCTTCTCCTaGCTATTACAAAATGAGGGA +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPMTSFS*LLQNEG
Trigger: TCCCTCATTTTGTAATAGGCAGGAGAAGGATGTCAT...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGACAGGCCCTCCTGCTaGTGGAGAACCAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEDRPSC*WRTSLW
Trigger: CCACAGGCTGGTTCTCCAGCAGCAGGAGGGCCTGTC...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGACAGGCCCTCCTGCTaGTGGAGAACCAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMDRPSC*WRTSLW
Trigger: CCACAGGCTGGTTCTCCAGCAGCAGGAGGGCCTGTC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGGCCAGCTCCTCATGCTaGCTGTCCGCGTCGCGAGAC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMASSSC*LSASRD
Trigger: GTCTCGCGACGCGGACAGGCAGCATGAGGAGCTGGC...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTATGCGCCCGCTGCTGCTaGTCACACCTGCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLCARCC*SHLRSQ
Trigger: CTGGCTGCGCAGGTGTGAGCAGCAGCAGCGGGCGCA...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATAGCCGCTCCAGGCTGTaGTGGTACTCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LHKSQPFRGTTSCSNYTDSRSRL*WYSWSW
Trigger: CCAGCTCCAGGAGTACCAGCACAGCCTGGAGCGGCT...ATCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTACTCCTCTGCCGGCCGTaGTTCCAGTGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLLLCRP*FQWPSR
Trigger: CCTGCTGGGCCACTGGAAGCACGGCCGGCAGAGGAG...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATCATGGCTTTCGCATCTaGAGCGATGGCCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LHKSQPFRGTTSCSNYTDHGFRI*SDGPAA
Trigger: GGCTGCGGGGCCATCGCTCCAGATGCGAAAGCCATG...ATCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCCTGGGACGCTGGACTaGAGAACGTTATCCTCGATG +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVPGTLD*RTLSSM
Trigger: CATCGAGGATAACGTTCTCCAGTCCAGCGTCCCAGG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp ATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATCTGAAGCCCATGGCCTaGGACGCTGGACTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: IYSHAREDFDSLYTRANHLKPMA*DAGLEN
Trigger: GTTCTCCAGTCCAGCGTCCCAGGCCATGGGCTTCAG...ATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp GTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCCTGAGCCAGAGCCCATaGTCACCGGAGAGTAACCTT +
Preference number: 4 (lower is better)
Translates to: VPIYSHAREDFDSLYTRALSQSP*SPESNL
Trigger: AAGGTTACTCTCCGGTGACCATGGGCTCTGGCTCAG...GGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCACTCGGGAGAAGCTTaGGGACCATCTGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVHSGEA*GPSALK
Trigger: TTTCAGGGCAGATGGTCCCCAAGCTTCTCCCGAGTG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp GTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAAATGCTCGGCTGTGTaGTTCAGGGTCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VPIYSHAREDFDSLYTRAKCSAV*FRVRVS
Trigger: GCTGACCCTGACCCTGAACCACACAGCCGAGCATTT...GGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCCTCTGGCCTGGCTTCTaGCTCAAAGGCCTTGACAAG +
Preference number: 4 (lower is better)
Translates to: RFIPMLGRTLIHSTQEPTLWPGF*LKGLDK
Trigger: CTTGTCAAGGCCTTTGAGCCAGAAGCCAGGCCAGAG...GGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAATCTAGGCTGTGCTaGTCTTCATGTTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVKSRLC*SSCSLC
Trigger: ACACAATGAACATGAAGACCAGCACAGCCTAGATTT...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTGACATTTTCACTAAGTaGGTACACACTGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVDIFTK*VHTGTG
Trigger: ACCAGTCCCAGTGTGTACCCACTTAGTGAAAATGTC...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTGGAGCTCTGAGACCCTaGAGTGTAACAGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFGALRP*SVTDVG
Trigger: TCCCACATCTGTTACACTCCAGGGTCTCAGAGCTCC...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACAGGGAGAAGAGCCCATaGACTGTAGCAGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: LGRTLIHSTQEPTIQRDNREKSP*TVAAHQ
Trigger: CTGATGAGCTGCTACAGTCCATGGGCTCTTCTCCCT...GTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTTATCCACGGTGCTGTaGTCCAGCTGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVLSTVL*SSCSSS
Trigger: AGAGGAGCTGCAGCTGGACCACAGCACCGTGGATAA...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCCAACAGAATGCATTCTaGAATTCCTCGGCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSQQNAF*NSSASS
Trigger: GCTCGACGCCGAGGAATTCCAGAATGCATTCTGTTG...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCGGTTTAATAAGGAGGTaGGGCTCTAGATGGACGTCC +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSGLIRR*GSRWTS
Trigger: GGACGTCCATCTAGAGCCCCACCTCCTTATTAAACC...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCTGGGGAGGCTCGCCTaGGTCAGGTTTAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVLGRLA*VRFNKE
Trigger: CTCCTTATTAAACCTGACCCAGGCGAGCCTCCCCAG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp ATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATAGTAATGAGGCTGCCTaGGGAGGCTCGCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: IYSHAREDFDSLYTRANHSNEAA*GGSPGS
Trigger: TGACCCAGGCGAGCCTCCCCAGGCAGCCTCATTACT...ATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTATGTGGCTGTCCTGAATaGTCAAGGCGGCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLCGCPE*SRRPEG
Trigger: GCCTTCAGGCCGCCTTGACCATTCAGGACAGCCACA...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAAGCTCCTCCTGCGACTaGCACTCCCGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLSSSCD*HSRSRS
Trigger: GGAGCGGGAGCGGGAGTGCCAGTCGCAGGAGGAGCT...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCTGGTACTCCTGGAGCTaGAGGTCCAGCTCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSWYSWS*RSSSPR
Trigger: CCGGGGCGAGCTGGACCTCCAGCTCCAGGAGTACCA...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACCTGTGCTGGTACTCCTaGAGCTGGAGGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: HSTQEPTIQRDNFLFKLYLCWYS*SWRSSS
Trigger: CGAGCTGGACCTCCAGCTCCAGGAGTACCAGCACAG...GTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCTGTGCTGGTACTCCTaGAGCTGGAGGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHLCWYS*SWRSSS
Trigger: CGAGCTGGACCTCCAGCTCCAGGAGTACCAGCACAG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAACGCTCCAGGCTGTGCTaGTACTCCTGGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSERSRLC*YSWSWR
Trigger: CCTCCAGCTCCAGGAGTACCAGCACAGCCTGGAGCG...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCTGTGAATTTGAGTCATaGGGGGTTGGGGACTCAGTG +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSCEFES*GVGDSV
Trigger: CACTGAGTCCCCAACCCCCCATGACTCAAATTCACA...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCCTCCTCTGCCTATGTaGGCACTGAGGCAACTGCCC +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHPPLPM*ALRQLP
Trigger: GGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGTCCACGTAGGTCACTaGGCCAGAGCCCATGGTCAC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMVHVGH*ARAHGH
Trigger: GTGACCATGGGCTCTGGCTCAGTGACCTACGTGGAC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp GGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTGCCCTGAAAATTTGTaGCGTCTTCCACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GRTLIHSTQEPTIQRDNFCPENL*RLPPAW
Trigger: CCAAGCTGGTGGAAGACGTCACAAATTTTCAGGGCA...GAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATGCCCTGAAAATTTGTaGCGTCTTCCACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVCPENL*RLPPAW
Trigger: CCAAGCTGGTGGAAGACGTCACAAATTTTCAGGGCA...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp AGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTGGGGACCATCTGCCCTaGAAATTTGTGACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: REDFDSLYTRANHSEGQLGDHLP*KFVTSS
Trigger: GGAAGACGTCACAAATTTTCAGGGCAGATGGTCCCC...AAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATAGGAGGCTTCTTCACTaGGCTGCACTCGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHRRLLH*AALGRS
Trigger: GCTTCTCCCGAGTGCAGCTCAGTGAAGAAGCCTCCT...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAAGGAGGCTTCTTCACTaGGCTGCACTCGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLRRLLH*AALGRS
Trigger: GCTTCTCCCGAGTGCAGCTCAGTGAAGAAGCCTCCT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGGTCAGCGTTTCCGATaGGTGAATGTAATGCAAGGA +
Preference number: 4 (lower is better)
Translates to: PMLGRTLIHSTQEPTIQRGQRFR*VNVMQG
Trigger: TCCTTGCATTACATTCACTCATCGGAAACGCTGACC...CCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCTGATTTGGCAGGTATaGTGTATTTATCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPLIWQV*CIYPIL
Trigger: AAGAATGGGATAAATACATCATACCTGCCAAATCAG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCGTTCCTGGGGCAAACTaGTGTCGATTCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGVPGAN*CRFSFS
Trigger: AGAGAAGCTGAATCGACATCAGTTTGCCCCAGGAAC...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp CCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACAGCAGCTCATCAGAATaGGACCTGCTTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PIYSHAREDFDSLYTRANSSSSE*DLLLQL
Trigger: CAGCTGCAGAAGCAGGTCTCATTCTGATGAGCTGCT...GTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGACCTGGGCATCACTGCTaGGGTCACTCCACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRPGHHC*GHSTEK
Trigger: CTTCTCTGTGGAGTGACCTCAGCAGTGATGCCCAGG...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTACCTGGGCATCACTGCTaGGGTCACTCCACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLPGHHC*GHSTEK
Trigger: CTTCTCTGTGGAGTGACCTCAGCAGTGATGCCCAGG...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTTAACAGCTTCTTTATaGTGGCAACAGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPLTASL*WQQNSP
Trigger: TGGAGAATTCTGTTGCCATCATAAAGAAGCTGTTAA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTTTAACAGCTTCTTTATaGTGGCAACAGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSLTASL*WQQNSP
Trigger: TGGAGAATTCTGTTGCCATCATAAAGAAGCTGTTAA...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTACACATGTCCATTTTTaGGCTTCGTGTATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSTHVHF*ASCMFC
Trigger: ACAAAACATACACGAAGCTCAAAAATGGACATGTGT...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGCACGGCGCCCATCTGTaGGGCCTTCACTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMHGAHL*GLHCNL
Trigger: CAAGTTGCAGTGAAGGCCTCACAGATGGGCGCCGTG...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCGTACATCATGAGAACTaGGTGTGTCCGCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGVHHEN*VCPPRQ
Trigger: CTGTCTTGGCGGACACACTCAGTTCTCATGATGTAC...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGTGCTGGAGCTGGTGCTaGAGCTGGTGCACATTGGCC +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMCWSWC*SWCTLA
Trigger: GGCCAATGTGCACCAGCTTCAGCACCAGCTCCAGCA...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTGCTGGAGCTGGTGCTaGAGCTGGTGCACATTGGCC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMCWSWC*SWCTLA
Trigger: GGCCAATGTGCACCAGCTTCAGCACCAGCTCCAGCA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTATCCTGATGGATAACTaGTGGATTCAGTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSILMDN*WIQFVE
Trigger: TTCAACAAACTGAATCCATCAGTTATCCATCAGGAT...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCATCCTGATGGATAACTaGTGGATTCAGTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPILMDN*WIQFVE
Trigger: TTCAACAAACTGAATCCATCAGTTATCCATCAGGAT...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCGAGAAGGGTCCACCTTaGGGTCTACTTGATGTTCAC +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGEKGPP*GLLDVH
Trigger: GTGAACATCAAGTAGACCTCAAGGTGGACCCTTCTC...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGCTATTTACATCAAAATaGCTTGATGGGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQLFTSK*LDGGSG
Trigger: CCCAGAGCCCCCATCAAGTCATTTTGATGTAAATAG...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAAAGAGGTGCTTCGCTaGAGCTCAACTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGKEVLR*SSTPWL
Trigger: AAGCCATGGAGTTGAGCTGCAGCGAAGCACCTCTTT...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCAGACGAGCCAGCCTaGAAGCCATGTTGTCCACGT +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRADEPA*KPCCPR
Trigger: ACGTGGACAACATGGCTTGCAGGCTGGCTCGTCTGC...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATGCAGACGAGCCAGCCTaGAAGCCATGTTGTCCACGT +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHADEPA*KPCCPR
Trigger: ACGTGGACAACATGGCTTGCAGGCTGGCTCGTCTGC...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGAATGAGACCTGCTTCTaGAGCTGTTATGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQNETCF*SCYGHS
Trigger: AGAGTGACCATAACAGCTGCAGAAGCAGGTCTCATT...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCCCAGCACAGGATTCCTaGCTTCGTTCCTTCATACTG +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGPAQDS*LRSFIL
Trigger: CAGTATGAAGGAACGAAGGCAGGAATCCTGTGCTGG...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTATTCCACCTTCTCCCCTaGATCAGAGACGGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLFHLLP*IRDGQV
Trigger: GACTTGGCCGTCTCTGATGCAGGGGAGAAGGTGGAA...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTTACAAGAATCCTTGCTaGTTTCATGGAAAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSYKNPC*FHGKEV
Trigger: TACTTCCTTTCCATGAAAGCAGCAAGGATTCTTGTA...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTATGTCAACGTACAACTaGACTTTGTCATACTGGAGC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVMSTYN*TLSYWS
Trigger: GCTCCAGTATGACAAAGTGCAGTTGTACGTTGACAT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp AGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTTGCAGCTCAACTCCATaGCTTTCGCATCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: REDFDSLYTRANHSEGQLCSSTP*LSHLER
Trigger: TCGCTCCAGATGCGAAAGCCATGGAGTTGAGCTGCA...AAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGCATGGCCTGGGACGCTaGACTGGAGAACGTTATCCT +
Preference number: 4 (lower is better)
Translates to: RTLIHSTQEPTIQRDNFLHGLGR*TGERYP
Trigger: AGGATAACGTTCTCCAGTCCAGCGTCCCAGGCCATG...CAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAGAAAGATTCAAGTTaGAAGCACACGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVKKDSS*KHTNLM
Trigger: CATCAAGTTCGTGTGCTTCCAACTTGAATCTTTCTT...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGGTAACAGATGTGGGATaGCTCAGAATGCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVVTDVG*LRMPFP
Trigger: GGGGAAGGGCATTCTGAGCCATCCCACATCTGTTAC...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp ATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACTCTGCTTCAAACTCCTaGGCATCACTGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: MLGRTLIHSTQEPTIQRDSASNS*ASLLRS
Trigger: TGACCTCAGCAGTGATGCCCAGGAGTTTGAAGCAGA...GTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTATCCACGGTGCTGTaGTCCAGCTGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RTLIHSTQEPTIQRDNFLLSTVL*SSCSSS
Trigger: AGAGGAGCTGCAGCTGGACCACAGCACCGTGGATAA...CAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTATTGCGTTCCTCCTTaGAATTGGTGTGAATTTCAT +
Preference number: 4 (lower is better)
Translates to: SSAYVGTEATALTVKVHPYCVPP*NWCEFH
Trigger: ATGAAATTCACACCAATTCCAAGGAGGAACGCAATA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTTATTGCGTTCCTCCTTaGAATTGGTGTGAATTTCAT +
Preference number: 4 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSYCVPP*NWCEFH
Trigger: ATGAAATTCACACCAATTCCAAGGAGGAACGCAATA...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGATCGGTTACCACACCCTaGATCCCGGGATCCACATCC +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRSVTTP*IPGSTS
Trigger: GGATGTGGATCCCGGGATCCAGGGTGTGGTAACCGA...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATTGTGGCTGTCCTGAATaGTCAAGGCGGCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHCGCPE*SRRPEG
Trigger: GCCTTCAGGCCGCCTTGACCATTCAGGACAGCCACA...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCCTCGGAGGATAGAGTaGCCGAGAGACAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMPRRIE*PRDRPS
Trigger: GGAGGGCCTGTCTCTCGGCCACTCTATCCTCCGAGG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TCATCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAGAAGCTGGTGCACATTaGCCAGCTCCTCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSVPIYSHAREDFDSLYTEAGAH*PAPHAA
Trigger: GGCAGCATGAGGAGCTGGCCAATGTGCACCAGCTTC...TGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCGCTCCAGGCTGTGCTaGTACTCCTGGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMRSRLC*YSWSWR
Trigger: CCTCCAGCTCCAGGAGTACCAGCACAGCCTGGAGCG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAACAATATTTTCTTTaGCTCCATCTCCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVKQYFL*LHLQFP
Trigger: GGGAAACTGGAGATGGAGCCAAAGAAAATATTGTTT...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGCCAGGGAGTGGTAGTTaGTGCTCCAGGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMPGSGS*CSRCWQ
Trigger: CTGCCAGCACCTGGAGCACCAACTACCACTCCCTGG...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCGTTGGGGACTCAGTGTaGGAGGTGTCCAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGVGDSV*EVSKSF
Trigger: GAAAGATTTGGACACCTCCCACACTGAGTCCCCAAC...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp GTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCTGCGCTCTGCAATCATaGCATGTCGCTGATGAGATC +
Preference number: 4 (lower is better)
Translates to: VPIYSHAREDFDSLYTRACALQS*HVADEI
Trigger: GATCTCATCAGCGACATGTCATGATTGCAGAGCGCA...GGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGGTCCACGTAGGTCACTaGGCCAGAGCCCATGGTCAC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMVHVGH*ARAHGH
Trigger: GTGACCATGGGCTCTGGCTCAGTGACCTACGTGGAC...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAAAGGAGGCTTCTTCACTaGGCTGCACTCGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LIHSTQEPTIQRDNFLFKRRLLH*AALGRS
Trigger: GCTTCTCCCGAGTGCAGCTCAGTGAAGAAGCCTCCT...TTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCGGTCAGCGTTTCCGATaGGTGAATGTAATGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGGQRFR*VNVMQG
Trigger: TCCTTGCATTACATTCACTCATCGGAAACGCTGACC...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCACTGGCTCAAAGGCCTTaGCAAGAAAGGCTCTATCCC +
Preference number: 4 (lower is better)
Translates to: YRFIPMLGRTLIHSTQEPLAQRP*QERLYP
Trigger: GGGATAGAGCCTTTCTTGTCAAGGCCTTTGAGCCAG...TGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTTCCAAATCACCAACCTaGTCAATCACCATACAGTTA +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVSKSPT*SITIQL
Trigger: TAACTGTATGGTGATTGATCAGGTTGGTGATTTGGA...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAAGGAATCCCAGTTCTTaGGGAGCTCTGAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRRNPSS*GALRPW
Trigger: CCAGGGTCTCAGAGCTCCTCAAGAACTGGGATTCCT...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp AGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTGTTCCTGGGGCAAACTaGTGTCGATTCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: REDFDSLYTRANHSEGQLVPGAN*CRFSFS
Trigger: AGAGAAGCTGAATCGACATCAGTTTGCCCCAGGAAC...AAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAATGTGGCTGACCTCCTaGAGCTTTCCAAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRMWLTS*SFPRWC
Trigger: GCACCACCTTGGAAAGCTTCAGGAGGTCAGCCACAT...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTGGCTGACCTCCTaGAGCTTTCCAAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLMWLTS*SFPRWC
Trigger: GCACCACCTTGGAAAGCTTCAGGAGGTCAGCCACAT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCTTGAAGGGAAATAACTaGTGGCTTCTGATCAACGGC +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSLKGNN*WLLING
Trigger: GCCGTTGATCAGAAGCCATCAGTTATTTCCCTTCAA...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTACTCAGGACCAGCAGATaGAGCACTGATCAGAAACAT +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVLRTSR*STDQKH
Trigger: ATGTTTCTGATCAGTGCTTCATCTGCTGGTCCTGAG...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCACGGCGCCCATCTGTaGGGCCTTCACTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMHGAHL*GLHCNL
Trigger: CAAGTTGCAGTGAAGGCCTCACAGATGGGCGCCGTG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TCATCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAATGGTCAAGGCGGCCTaGAGGCTGTATAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: SSVPIYSHAREDFDSLYTMVKAA*RLYKRR
Trigger: CCGTCTCTTATACAGCCTTCAGGCCGCCTTGACCAT...TGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGTCAAGGCGGCCTaGAGGCTGTATAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLMVKAA*RLYKRR
Trigger: CCGTCTCTTATACAGCCTTCAGGCCGCCTTGACCAT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATATGGTCAAGGCGGCCTaGAGGCTGTATAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHMVKAA*RLYKRR
Trigger: CCGTCTCTTATACAGCCTTCAGGCCGCCTTGACCAT...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGTGCTGGAGCTGGTGCTaGAGCTGGTGCACATTGGCC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMCWSWC*SWCTLA
Trigger: GGCCAATGTGCACCAGCTTCAGCACCAGCTCCAGCA...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACACCTTGAGGTCTACTTaGTGTTCACTAGTCCTCACC +
Preference number: 4 (lower is better)
Translates to: LGRTLIHSTQEPTIQRDNTLRST*CSLVLT
Trigger: GGTGAGGACTAGTGAACATCAAGTAGACCTCAAGGT...GTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTTCCACAGTTTGTGACTaGCATTCGAAGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFSTVCD*HSKAEK
Trigger: CTTCTCAGCCTTCGAATGTCAGTCACAAACTGTGGA...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGATGGAAAGGAAGTATCTaGTGGCCGGAACCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRWKGSI*WPEPAA
Trigger: AGCCGCTGGTTCCGGCCATCAGATACTTCCTTTCCA...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTATGGAAAGGAAGTATCTaGTGGCCGGAACCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLWKGSI*WPEPAA
Trigger: AGCCGCTGGTTCCGGCCATCAGATACTTCCTTTCCA...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATTGGAAAGGAAGTATCTaGTGGCCGGAACCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHWKGSI*WPEPAA
Trigger: AGCCGCTGGTTCCGGCCATCAGATACTTCCTTTCCA...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCCTATTTACATCAAAATaGCTTGATGGGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSLFTSK*LDGGSG
Trigger: CCCAGAGCCCCCATCAAGTCATTTTGATGTAAATAG...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCTGCCCGTAAAGAGGTaGTTCGCTGCAGCTCAACTC +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHLPVKR*FAAAQL
Trigger: GAGTTGAGCTGCAGCGAAGCACCTCTTTACGGGCAG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp ATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCTGAGGCCACAGAGTaGAACCTCTGGATTCAGGGC +
Preference number: 4 (lower is better)
Translates to: IYSHAREDFDSLYTRANHSEATE*NLWIQG
Trigger: GCCCTGAATCCAGAGGTTGCACTCTGTGGCCTCAGA...ATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTGCTCTTCACTTGAACTaGATACTGTTAATTCACGCA +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVALHLN*ILLIHA
Trigger: TGCGTGAATTAACAGTATGCAGTTCAAGTGAAGAGC...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGAGCTTTCCAAGGTGGTaGCTGGAACACTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVSFPRW*LEHFWT
Trigger: TGTCCAGAAGTGTTCCAGGCACCACCTTGGAAAGCT...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTATGACATCCTTCTCCTaGCTATTACAAAATGAGGGA +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVMTSFS*LLQNEG
Trigger: TCCCTCATTTTGTAATAGGCAGGAGAAGGATGTCAT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp CGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCCCAGCACAGGATTCCTaGCTTCGTTCCTTCATACTG +
Preference number: 4 (lower is better)
Translates to: RFIPMLGRTLIHSTQEPTPAQDS*LRSFIL
Trigger: CAGTATGAAGGAACGAAGGCAGGAATCCTGTGCTGG...GGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGCTTCTGATCAACGGCTaGAAAGATGTATTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQLLING*KDVFLV
Trigger: GACCAGAAATACATCTTTGCAGCCGTTGATCAGAAG...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTATTGGCCAGCTCCTCATaGTGCCTGTCCGCGTCGCGA +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLLASSS*CLSASR
Trigger: TCGCGACGCGGACAGGCAGCATGAGGAGCTGGCCAA...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGGGGAGTGGTAGTTGGTaGTCCAGGTGCTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMGSGSW*SRCWQG
Trigger: TCCCTGCCAGCACCTGGAGCACCAACTACCACTCCC...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGATGTCAACGTACAACTaGACTTTGTCATACTGGAGC +
Preference number: 4 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQMSTYN*TLSYWS
Trigger: GCTCCAGTATGACAAAGTGCAGTTGTACGTTGACAT...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TCATCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACACCTGGGACGCTGGACTaGAGAACGTTATCCTCGATG +
Preference number: 4 (lower is better)
Translates to: SSVPIYSHAREDFDSLYTPGTLD*RTLSSM
Trigger: CATCGAGGATAACGTTCTCCAGTCCAGCGTCCCAGG...TGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp TCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATGCCGTCAAGGCAAATaGGGTCAGCAGGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: STQEPTIQRDNFLFKLYRCRQGK*GQQGLV
Trigger: CACCAGACCCTGCTGACCCCATTTGCCTTGACGGCA...TCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCGTCTTCCACCAGCTTaGAGTGTCCTTCACGTAAAG +
Preference number: 4 (lower is better)
Translates to: PIYSHAREDFDSLYTRANRLPPA*SVLHVK
Trigger: CTTTACGTGAAGGACACTCCAAGCTGGTGGAAGACG...GTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGGACATGAAGGACTGCTaGGCTTCAGTGTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RTLIHSTQEPTIQRDNFLDMKDC*ASVCAV
Trigger: GACAGCACACACTGAAGCCCAGCAGTCCTTCATGTC...CAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTCCAAGGATGGTCTGTaGTTTGTTCTTGTTATATTT +
Preference number: 4 (lower is better)
Translates to: FPTSSSAYVGTEATALTVSKDGL*FVLVIF
Trigger: AAATATAACAAGAACAAACCACAGACCATCCTTGGA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTCTGCTTCAAACTCCTaGGCATCACTGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVSASNS*ASLLRS
Trigger: TGACCTCAGCAGTGATGCCCAGGAGTTTGAAGCAGA...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CATCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAACTGGGGAGGCTCGCCTaGGTCAGGTTTAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: HQYRFIPMLGRTLIHSTQLGRLA*VRFNKE
Trigger: CTCCTTATTAAACCTGACCCAGGCGAGCCTCCCCAG...TTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTACTGGGGAGGCTCGCCTaGGTCAGGTTTAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLLGRLA*VRFNKE
Trigger: CTCCTTATTAAACCTGACCCAGGCGAGCCTCCCCAG...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGTAATGAGGCTGCCTaGGGAGGCTCGCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMSNEAA*GGSPGS
Trigger: TGACCCAGGCGAGCCTCCCCAGGCAGCCTCATTACT...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGAAGCTGGTGCACATTaGCCAGCTCCTCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMEAGAH*PAPHAA
Trigger: GGCAGCATGAGGAGCTGGCCAATGTGCACCAGCTTC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTACGCTCCAGGCTGTGCTaGTACTCCTGGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLRSRLC*YSWSWR
Trigger: CCTCCAGCTCCAGGAGTACCAGCACAGCCTGGAGCG...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCTGGCTCAAAGGCCTTaGCAAGAAAGGCTCTATCCC +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHLAQRP*QERLYP
Trigger: GGGATAGAGCCTTTCTTGTCAAGGCCTTTGAGCCAG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAATCCATTCAGCATGTCTaGAAGCCGGCCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSESIQHV*KPACSK
Trigger: CTTGCTGCAGGCCGGCTTTCAGACATGCTGAATGGA...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGTGTGTTTGCTGCTCTaGGGCCACAGAGTGCAACCT +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMVCLLL*GHRVQP
Trigger: AGGTTGCACTCTGTGGCCTCAGAGCAGCAAACACAC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAAACTTGATGGTGACATaGAGGACTGCTGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: YRFIPMLGRTLIHSTQEPNLMVT*RTAGLQ
Trigger: CTGAAGCCCAGCAGTCCTTCATGTCACCATCAAGTT...TGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp TCATCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACACTCCAAGGATGTGGCTaGCCTCCTGAAGCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SSVPIYSHAREDFDSLYTLQGCG*PPEAFQ
Trigger: TTGGAAAGCTTCAGGAGGTCAGCCACATCCTTGGAG...TGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCTCCAAGGATGTGGCTaGCCTCCTGAAGCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHLQGCG*PPEAFQ
Trigger: TTGGAAAGCTTCAGGAGGTCAGCCACATCCTTGGAG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTACTCCAAGGATGTGGCTaGCCTCCTGAAGCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLLQGCG*PPEAFQ
Trigger: TTGGAAAGCTTCAGGAGGTCAGCCACATCCTTGGAG...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCCTGCCTATTACAAAATaGGGGATCCACCACAAGACT +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGLPITK*GIHHKT
Trigger: AGTCTTGTGGTGGATCCCTCATTTTGTAATAGGCAG...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTTATTTTGTAATACGCTaGGTGACCAACAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVYFVIR*VTNRMH
Trigger: ATGCATTCTGTTGGTCACTCAGCGTATTACAAAATA...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTACACATGTCCATTTTTaGGCTTCGTGTATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVTHVHF*ASCMFC
Trigger: ACAAAACATACACGAAGCTCAAAAATGGACATGTGT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTGTCCTCACATGATTaGCTCACGGCGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: LIHSTQEPTIQRDNFLFKLSSHD*LTAPIC
Trigger: ACAGATGGGCGCCGTGAGTCAATCATGTGAGGACAG...TTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp ATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTACTTCTCTCCCTCCTGTaGCTAATGAGGCAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: IHSTQEPTIQRDNFLFKLLLSLL*LMRQSV
Trigger: CACCGACTGCCTCATTAGTCACAGGAGGGAGAGAAG...TAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTACTGGGCTTCAGTGTGTaGTGTCCCTTCGACATTTTC +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLLGFSV*CPFDIF
Trigger: GAAAATGTCGAAGGGACAGCACACACTGAAGCCCAG...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGTGGGATGGCTCAGAATaGCCTTCCCCTTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMWDGSE*PSPSLS
Trigger: CGACAGTGAAGGGGAAGGGCATTCTGAGCCATCCCA...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTGGGATGGCTCAGAATaGCCTTCCCCTTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMWDGSE*PSPSLS
Trigger: CGACAGTGAAGGGGAAGGGCATTCTGAGCCATCCCA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp AGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGGAATTTCTTGGTaGATGCAGGCGCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: REDFDSLYTRANHSEGQLLGISW*MQAQHL
Trigger: AAGATGCTGCGCCTGCATGCACCAAGAAATTCCAAG...AAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp ATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTAGTGCTGTGGTCCAGCTaGAGCTCCTCTTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: IHSTQEPTIQRDNFLFKLVLWSS*SSSFMP
Trigger: AGGCATGAAAGAGGAGCTGCAGCTGGACCACAGCAC...TAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGTGCTGTGGTCCAGCTaGAGCTCCTCTTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEVLWSS*SSSFMP
Trigger: AGGCATGAAAGAGGAGCTGCAGCTGGACCACAGCAC...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp AGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTAAATTTTATCCACGGTaGTGTGGTCCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: REDFDSLYTRANHSEGQLKFYPR*CGPAAA
Trigger: AGCTGCAGCTGGACCACAGCACCGTGGATAAAATTT...AAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp ATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATCAAAATTCCTGTCGCTaGCAGCACAGGATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: IYSHAREDFDSLYTRANHQNSCR*QHRIPA
Trigger: GGCAGGAATCCTGTGCTGGCAGCGACAGGAATTTTG...ATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCTCACTCATCAGTGCCTaGTTCCTAAACACATGTCCA +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGSLISA*FLNTCP
Trigger: TGGACATGTGTTTAGGAAGCAGGCACTGATGAGTGA...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCCTTCTGATCAACGGCTaGAAAGATGTATTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSLLING*KDVFLV
Trigger: GACCAGAAATACATCTTTGCAGCCGTTGATCAGAAG...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCGTCTCATCCAGTTATTaGGTTCCTCCTTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGVSSSY*VPPWNW
Trigger: CCAATTCCAAGGAGGAACGCAATAACTGGATGAGAC...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTAGTCTCATCCAGTTATTaGGTTCCTCCTTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVVSSSY*VPPWNW
Trigger: CCAATTCCAAGGAGGAACGCAATAACTGGATGAGAC...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTTCCACCTTCTCCCCTaGATCAGAGACGGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMFHLLP*IRDGQV
Trigger: GACTTGGCCGTCTCTGATGCAGGGGAGAAGGTGGAA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAGGGAGTGGTAGTTGGTaGTCCAGGTGCTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLGSGSW*SRCWQG
Trigger: TCCCTGCCAGCACCTGGAGCACCAACTACCACTCCC...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTTCGGAAGGCAGGATATaGCAGTTTTCCTTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFSEGRI*QFSFVE
Trigger: TTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGA...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCGGAAGGCAGGATATaGCAGTTTTCCTTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVSEGRI*QFSFVE
Trigger: TTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGA...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATAGAGGCAATTCCAGATaGGTCAGAGCCAGCACGAGC +
Preference number: 4 (lower is better)
Translates to: LHKSQPFRGTTSCSNYTDRGNSR*VRASTS
Trigger: GCTCGTGCTGGCTCTGACCCATCTGGAATTGCCTCT...ATCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATTGGCACCCTCTTCGTTaGGTAAAGCCAAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LHKSQPFRGTTSCSNYTDWHPLR*VKPRPG
Trigger: TCCAGGCCTTGGCTTTACCCAACGAAGAGGGTGCCA...ATCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp ATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTACACTCGGGAGAAGCTTaGGGACCATCTGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: IHSTQEPTIQRDNFLFKLHSGEA*GPSALK
Trigger: TTTCAGGGCAGATGGTCCCCAAGCTTCTCCCGAGTG...TAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCACTCGGGAGAAGCTTaGGGACCATCTGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMHSGEA*GPSALK
Trigger: TTTCAGGGCAGATGGTCCCCAAGCTTCTCCCGAGTG...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGAAATGCTCGGCTGTGTaGTTCAGGGTCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMKCSAV*FRVRVS
Trigger: GCTGACCCTGACCCTGAACCACACAGCCGAGCATTT...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTATTCTTTCCTCTGGCCTaGCTTCTGGCTCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLFFPLA*LLAQRP
Trigger: AGGCCTTTGAGCCAGAAGCCAGGCCAGAGGAAAGAA...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTAGACATTTTCACTAAGTaGGTACACACTGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVDIFTK*VHTGTG
Trigger: ACCAGTCCCAGTGTGTACCCACTTAGTGAAAATGTC...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAGACATGAAGGACTGCTaGGCTTCAGTGTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLDMKDC*ASVCAV
Trigger: GACAGCACACACTGAAGCCCAGCAGTCCTTCATGTC...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATGACATGAAGGACTGCTaGGCTTCAGTGTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHDMKDC*ASVCAV
Trigger: GACAGCACACACTGAAGCCCAGCAGTCCTTCATGTC...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTAAGAAAGATTCAAGTTaGAAGCACACGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVKKDSS*KHTNLM
Trigger: CATCAAGTTCGTGTGCTTCCAACTTGAATCTTTCTT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATGTAACAGATGTGGGATaGCTCAGAATGCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: IYSHAREDFDSLYTRANHVTDVG*LRMPFP
Trigger: GGGGAAGGGCATTCTGAGCCATCCCACATCTGTTAC...ATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATGTAACAGATGTGGGATaGCTCAGAATGCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHVTDVG*LRMPFP
Trigger: GGGGAAGGGCATTCTGAGCCATCCCACATCTGTTAC...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp CACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACGGAGCTCTGAGACCCTaGAGTGTAACAGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: HSTQEPTIQRDNFLFKLYGALRP*SVTDVG
Trigger: TCCCACATCTGTTACACTCCAGGGTCTCAGAGCTCC...GTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAGGAGCTCTGAGACCCTaGAGTGTAACAGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLGALRP*SVTDVG
Trigger: TCCCACATCTGTTACACTCCAGGGTCTCAGAGCTCC...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp GTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCTCTCTTGGAATTTCTTaGTGCATGCAGGCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VPIYSHAREDFDSLYTRASLGIS*CMQAQH
Trigger: ATGCTGCGCCTGCATGCACCAAGAAATTCCAAGAGA...GGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTAACACTTCTGGACAATaGATGGACCTGTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: REDFDSLYTRANHSEGQLNTSGQ*MDLSHS
Trigger: ACTGTGGGACAGGTCCATCCATTGTCCAGAAGTGTT...AAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGAACACTTCTGGACAATaGATGGACCTGTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVNTSGQ*MDLSHS
Trigger: ACTGTGGGACAGGTCCATCCATTGTCCAGAAGTGTT...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATAGGGAGAAGAGCCCATaGACTGTAGCAGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHREKSP*TVAAHQ
Trigger: CTGATGAGCTGCTACAGTCCATGGGCTCTTCTCCCT...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTAAGGTGGGGCTCTAGATaGACGTCCTCAAATCCGCTC +
Preference number: 4 (lower is better)
Translates to: IHSTQEPTIQRDNFLFKLRWGSR*TSSNPL
Trigger: GAGCGGATTTGAGGACGTCCATCTAGAGCCCCACCT...TAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGAGGTGGGGCTCTAGATaGACGTCCTCAAATCCGCTC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMRWGSR*TSSNPL
Trigger: GAGCGGATTTGAGGACGTCCATCTAGAGCCCCACCT...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCTCGGTTACCACACCCTaGATCCCGGGATCCACATCC +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSSVTTP*IPGSTS
Trigger: GGATGTGGATCCCGGGATCCAGGGTGTGGTAACCGA...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCGAAGCTGGTGCACATTaGCCAGCTCCTCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSEAGAH*PAPHAA
Trigger: GGCAGCATGAGGAGCTGGCCAATGTGCACCAGCTTC...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTTTTCCCCATCTTGTCTaGTCATTGTCCTTGTCGGTA +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFFPHLV*SLSLSV
Trigger: TACCGACAAGGACAATGACCAGACAAGATGGGGAAA...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTAAACAATATTTTCTTTaGCTCCATCTCCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: TSSSAYVGTEATALTVKVKQYFL*LHLQFP
Trigger: GGGAAACTGGAGATGGAGCCAAAGAAAATATTGTTT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAGGGGCTCTGGGCCTCTaGGCCTTGTTAAAAGATGAT +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLGALGL*ALLKDD
Trigger: ATCATCTTTTAACAAGGCCCAGAGGCCCAGAGCCCC...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACGAACCACCAGGCTTTTaGCACGCTTTATATCTTCCT +
Preference number: 4 (lower is better)
Translates to: PIYSHAREDFDSLYTRANEPPGF*HALYLP
Trigger: AGGAAGATATAAAGCGTGTCAAAAGCCTGGTGGTTC...GTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTTCATGTTCATTGTGTTaGACCACCAGGCTTTTGACA +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFSCSLC*TTRLLT
Trigger: TGTCAAAAGCCTGGTGGTTCAACACAATGAACATGA...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGTCCATTCAGCATGTCTaGAAGCCGGCCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMSIQHV*KPACSK
Trigger: CTTGCTGCAGGCCGGCTTTCAGACATGCTGAATGGA...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGGAATCCCAGTTCTTaGGGAGCTCTGAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMRNPSS*GALRPW
Trigger: CCAGGGTCTCAGAGCTCCTCAAGAACTGGGATTCCT...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCAGGAATCCCAGTTCTTaGGGAGCTCTGAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSRNPSS*GALRPW
Trigger: CCAGGGTCTCAGAGCTCCTCAAGAACTGGGATTCCT...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCTGCCTATTACAAAATaGGGGATCCACCACAAGACT +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVLPITK*GIHHKT
Trigger: AGTCTTGTGGTGGATCCCTCATTTTGTAATAGGCAG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCCTGTCCTCACATGATTaGCTCACGGCGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSLSSHD*LTAPIC
Trigger: ACAGATGGGCGCCGTGAGTCAATCATGTGAGGACAG...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGACAACTGTCCTCACATaGTTGACTCACGGCGCCCAT +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMTTVLT*LTHGAH
Trigger: ATGGGCGCCGTGAGTCAATCATGTGAGGACAGTTGT...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATGTACATCATGAGAACTaGGTGTGTCCGCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHVHHEN*VCPPRQ
Trigger: CTGTCTTGGCGGACACACTCAGTTCTCATGATGTAC...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGATCCTGGTACATCATaGGAACTGAGTGTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEDPGTS*ELSVSA
Trigger: GGCGGACACACTCAGTTCTCATGATGTACCAGGATC...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGATCCTGGTACATCATaGGAACTGAGTGTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMDPGTS*ELSVSA
Trigger: GGCGGACACACTCAGTTCTCATGATGTACCAGGATC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCCTTCTCTCCCTCCTGTaGCTAATGAGGCAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSLLSLL*LMRQSV
Trigger: CACCGACTGCCTCATTAGTCACAGGAGGGAGAGAAG...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCTTCTCTCCCTCCTGTaGCTAATGAGGCAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMLLSLL*LMRQSV
Trigger: CACCGACTGCCTCATTAGTCACAGGAGGGAGAGAAG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAGAGAAGGGTCCACCTTaGGGTCTACTTGATGTTCAC +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLEKGPP*GLLDVH
Trigger: GTGAACATCAAGTAGACCTCAAGGTGGACCCTTCTC...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATAAACGCCTGCAGTTaGGGGCGGTGTGAATTTGAG +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLINACS*GRCEFE
Trigger: CTCAAATTCACACCGCCCTCAACTGCAGGCGTTTAT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCAACACGTGCCCAGTTaGATAGTGACTGTAACAGAT +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVQHVPS*IVTVTD
Trigger: ATCTGTTACAGTCACTATTCAACTGGGCACGTGTTG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGGTATCCCTGGCTCAGTaGCTGACCAATCACAACACG +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMVSLAQ*LTNHNT
Trigger: CGTGTTGTGATTGGTCAGTCACTGAGCCAGGGATAC...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAAAGAGGTGCTTCGCTaGAGCTCAACTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: HSTQEPTIQRDNFLFKLYKEVLR*SSTPWL
Trigger: AAGCCATGGAGTTGAGCTGCAGCGAAGCACCTCTTT...GTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAAAAGAGGTGCTTCGCTaGAGCTCAACTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLKEVLR*SSTPWL
Trigger: AAGCCATGGAGTTGAGCTGCAGCGAAGCACCTCTTT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp CATCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAATCCTCGATGCGCTCTaGAATCATGACATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: HQYRFIPMLGRTLIHSTQILDAL*NHDMSL
Trigger: CAGCGACATGTCATGATTGCAGAGCGCATCGAGGAT...TTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATATCCTCGATGCGCTCTaGAATCATGACATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHILDAL*NHDMSL
Trigger: CAGCGACATGTCATGATTGCAGAGCGCATCGAGGAT...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCTTCTTCAGTTTCTaGACCGCTGGAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMLFFSF*TAGGHS
Trigger: GCTATGCCCTCCAGCGGTGCAGAAACTGAAGAAGAG...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCTCCAAATCTAGGCTGTaGTGGTCTTCATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGSKSRL*WSSCSL
Trigger: CAATGAACATGAAGACCAGCACAGCCTAGATTTGGA...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGGTGACATGAAGGACTaGTGGGCTTCAGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMGDMKD*WASVCA
Trigger: AGCACACACTGAAGCCCAGCAGTCCTTCATGTCACC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGGGTGACATGAAGGACTaGTGGGCTTCAGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMGDMKD*WASVCA
Trigger: AGCACACACTGAAGCCCAGCAGTCCTTCATGTCACC...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCATCAGAATGAGACCTaGTTCTGCAGCTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVHQNET*FCSCYG
Trigger: ACCATAACAGCTGCAGAAGCAGGTCTCATTCTGATG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGAAGACTCCAAGATTCTaGTTCAAACTCCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVKTPRF*FKLLGI
Trigger: GATGCCCAGGAGTTTGAAGCAGAATCTTGGAGTCTT...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGGTGCTGTGGTCCAGCTaGAGCTCCTCTTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMVLWSS*SSSFMP
Trigger: AGGCATGAAAGAGGAGCTGCAGCTGGACCACAGCAC...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCGTGCTGTGGTCCAGCTaGAGCTCCTCTTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSVLWSS*SSSFMP
Trigger: AGGCATGAAAGAGGAGCTGCAGCTGGACCACAGCAC...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp GTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCTCACTCATCAGTGCCTaGTTCCTAAACACATGTCCA +
Preference number: 4 (lower is better)
Translates to: VPIYSHAREDFDSLYTRASLISA*FLNTCP
Trigger: TGGACATGTGTTTAGGAAGCAGGCACTGATGAGTGA...GGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACCAACTTTCTACAGCCTaGTGGATCCGTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: HSTQEPTIQRDNFLFKLYQLSTA*WIRLIQ
Trigger: CTGGATGAGACGGATCCAGCAGGCTGTAGAAAGTTG...GTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTAATGTCAACGTACAACTaGACTTTGTCATACTGGAGC +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVMSTYN*TLSYWS
Trigger: GCTCCAGTATGACAAAGTGCAGTTGTACGTTGACAT...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCCCTGGGACGCTGGACTaGAGAACGTTATCCTCGATG +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSPGTLD*RTLSSM
Trigger: CATCGAGGATAACGTTCTCCAGTCCAGCGTCCCAGG...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCATGGCCTGGGACGCTaGACTGGAGAACGTTATCCT +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMHGLGR*TGERYP
Trigger: AGGATAACGTTCTCCAGTCCAGCGTCCCAGGCCATG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTATGCCGTCAAGGCAAATaGGGTCAGCAGGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLCRQGK*GQQGLV
Trigger: CACCAGACCCTGCTGACCCCATTTGCCTTGACGGCA...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGAGGCAATTCCAGATaGGTCAGAGCCAGCACGAGC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMRGNSR*VRASTS
Trigger: GCTCGTGCTGGCTCTGACCCATCTGGAATTGCCTCT...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAAGACACAAGAAGAACTaGGAAAGTTTAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: YRFIPMLGRTLIHSTQEPRHKKN*ESLARP
Trigger: GGGCCTGGCTAAACTTTCCCAGTTCTTCTTGTGTCT...TGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTACGTCTTCCACCAGCTTaGAGTGTCCTTCACGTAAAG +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLRLPPA*SVLHVK
Trigger: CTTTACGTGAAGGACACTCCAAGCTGGTGGAAGACG...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAAATGCTCGGCTGTGTaGTTCAGGGTCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMKCSAV*FRVRVS
Trigger: GCTGACCCTGACCCTGAACCACACAGCCGAGCATTT...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATTCTTTCCTCTGGCCTaGCTTCTGGCTCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: IHSTQEPTIQRDNFLFKLFFPLA*LLAQRP
Trigger: AGGCCTTTGAGCCAGAAGCCAGGCCAGAGGAAAGAA...TAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp GTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCGACATTTTCACTAAGTaGGTACACACTGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: VPIYSHAREDFDSLYTRADIFTK*VHTGTG
Trigger: ACCAGTCCCAGTGTGTACCCACTTAGTGAAAATGTC...GGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp ATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTACTTCTGGACAATGGATaGACCTGTCCCACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: IHSTQEPTIQRDNFLFKLLLDNG*TCPTVS
Trigger: GGAGACTGTGGGACAGGTCCATCCATTGTCCAGAAG...TAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTTCTGGACAATGGATaGACCTGTCCCACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMLLDNG*TCPTVS
Trigger: GGAGACTGTGGGACAGGTCCATCCATTGTCCAGAAG...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTTCCAAGGTGGTGCCTaGAACACTTCTGGACAATGG +
Preference number: 4 (lower is better)
Translates to: IYSHAREDFDSLYTRANHFQGGA*NTSGQW
Trigger: CCATTGTCCAGAAGTGTTCCAGGCACCACCTTGGAA...ATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTATCTGCTTCAAACTCCTaGGCATCACTGCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLSASNS*ASLLRS
Trigger: TGACCTCAGCAGTGATGCCCAGGAGTTTGAAGCAGA...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGTTATCCACGGTGCTGTaGTCCAGCTGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMLSTVL*SSCSSS
Trigger: AGAGGAGCTGCAGCTGGACCACAGCACCGTGGATAA...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGGTGGGGCTCTAGATaGACGTCCTCAAATCCGCTC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMRWGSR*TSSNPL
Trigger: GAGCGGATTTGAGGACGTCCATCTAGAGCCCCACCT...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCAGGTGGGGCTCTAGATaGACGTCCTCAAATCCGCTC +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSRWGSR*TSSNPL
Trigger: GAGCGGATTTGAGGACGTCCATCTAGAGCCCCACCT...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTATCGGTTACCACACCCTaGATCCCGGGATCCACATCC +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLSVTTP*IPGSTS
Trigger: GGATGTGGATCCCGGGATCCAGGGTGTGGTAACCGA...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAGTTGGGGACTCAGTGTaGGAGGTGTCCAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLVGDSV*EVSKSF
Trigger: GAAAGATTTGGACACCTCCCACACTGAGTCCCCAAC...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGTGCCCTGAAAATTTGTaGCGTCTTCCACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMCPENL*RLPPAW
Trigger: CCAAGCTGGTGGAAGACGTCACAAATTTTCAGGGCA...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCTGGCTCAAAGGCCTTaGCAAGAAAGGCTCTATCCC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMLAQRP*QERLYP
Trigger: GGGATAGAGCCTTTCTTGTCAAGGCCTTTGAGCCAG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCTCATGTTCATTGTGTTaGACCACCAGGCTTTTGACA +
Preference number: 4 (lower is better)
Translates to: RFIPMLGRTLIHSTQEPTSCSLC*TTRLLT
Trigger: TGTCAAAAGCCTGGTGGTTCAACACAATGAACATGA...GGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTCCAAATCACCAACCTaGTCAATCACCATACAGTTA +
Preference number: 4 (lower is better)
Translates to: LGRTLIHSTQEPTIQRDNSKSPT*SITIQL
Trigger: TAACTGTATGGTGATTGATCAGGTTGGTGATTTGGA...GTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp ATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATGCAAGAATAAGAACGTaGGCGAACTCCAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: IYSHAREDFDSLYTRANHARIRT*ANSRKQ
Trigger: CTGCTTTCTGGAGTTCGCTCACGTTCTTATTCTTGC...ATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAGCAAGAATAAGAACGTaGGCGAACTCCAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLARIRT*ANSRKQ
Trigger: CTGCTTTCTGGAGTTCGCTCACGTTCTTATTCTTGC...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp ATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTAGTACATCATGAGAACTaGGTGTGTCCGCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: IHSTQEPTIQRDNFLFKLVHHEN*VCPPRQ
Trigger: CTGTCTTGGCGGACACACTCAGTTCTCATGATGTAC...TAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGTACATCATGAGAACTaGGTGTGTCCGCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMVHHEN*VCPPRQ
Trigger: CTGTCTTGGCGGACACACTCAGTTCTCATGATGTAC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAATGGTCAAGGCGGCCTaGAGGCTGTATAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLMVKAA*RLYKRR
Trigger: CCGTCTCTTATACAGCCTTCAGGCCGCCTTGACCAT...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGAGAGAAGGGTCCACCTTaGGGTCTACTTGATGTTCAC +
Preference number: 4 (lower is better)
Translates to: STQEPTIQRDNFLFKLYREKGPP*GLLDVH
Trigger: GTGAACATCAAGTAGACCTCAAGGTGGACCCTTCTC...TCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTACAACACGTGCCCAGTTaGATAGTGACTGTAACAGAT +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLQHVPS*IVTVTD
Trigger: ATCTGTTACAGTCACTATTCAACTGGGCACGTGTTG...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCTTCTCTCCCTCCTGTaGCTAATGCTTCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHLLSLL*LMLLSV
Trigger: CACTGAAAGAAGCATTAGTCACAGGAGGGAGAGAAG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512883.1
CDS-3UTR GCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAGAAGGGTGTGTTTGCTaGTCTGAGGCCACAGAGTGC +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLEGCVC*SEATEC
Trigger: GCACTCTGTGGCCTCAGAGCAGCAAACACACCCTTC...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGACTGGGCTTCAGTGTGTaGTGTCCCTTCGACATTTTC +
Preference number: 4 (lower is better)
Translates to: STQEPTIQRDNFLFKLYRLGFSV*CPFDIF
Trigger: GAAAATGTCGAAGGGACAGCACACACTGAAGCCCAG...TCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTGGGCTTCAGTGTGTaGTGTCCCTTCGACATTTTC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMLGFSV*CPFDIF
Trigger: GAAAATGTCGAAGGGACAGCACACACTGAAGCCCAG...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp GGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCGCTCTTCACTTGAACTaGATACTGTTAATTCACGCA +
Preference number: 4 (lower is better)
Translates to: GRTLIHSTQEPTIQRDNFALHLN*ILLIHA
Trigger: TGCGTGAATTAACAGTATGCAGTTCAAGTGAAGAGC...GAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTGCTCTTCACTTGAACTaGATACTGTTAATTCACGCA +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFALHLN*ILLIHA
Trigger: TGCGTGAATTAACAGTATGCAGTTCAAGTGAAGAGC...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGAGCTTTCCAAGGTGGTaGCTGGAACACTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMSFPRW*LEHFWT
Trigger: TGTCCAGAAGTGTTCCAGGCACCACCTTGGAAAGCT...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAAAATTTTATCCACGGTaGTGTGGTCCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLKFYPR*CGPAAA
Trigger: AGCTGCAGCTGGACCACAGCACCGTGGATAAAATTT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCCAGCACAGGATTCCTaGCTTCGTTCCTTCATACTG +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMPAQDS*LRSFIL
Trigger: CAGTATGAAGGAACGAAGGCAGGAATCCTGTGCTGG...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCTTAAGCAAAGCGCTTTaGGTAAGTCTTTATGTTCCT +
Preference number: 4 (lower is better)
Translates to: LETPPALGLGTKQVRTVSLSKAL*VSLYVP
Trigger: AGGAACATAAAGACTTACGCAAAGCGCTTTGCTTAA...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAACAACTTTCTACAGCCTaGTGGATCCGTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEQLSTA*WIRLIQ
Trigger: CTGGATGAGACGGATCCAGCAGGCTGTAGAAAGTTG...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTACATGGCCTGGGACGCTaGACTGGAGAACGTTATCCT +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLHGLGR*TGERYP
Trigger: AGGATAACGTTCTCCAGTCCAGCGTCCCAGGCCATG...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTACTGAGCCAGAGCCCATaGTCACCGGAGAGTAACCTT +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLLSQSP*SPESNL
Trigger: AAGGTTACTCTCCGGTGACCATGGGCTCTGGCTCAG...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGACTAAGTCTAATGGTGTaGCACCCTCTTCGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRLSLMV*HPLRWV
Trigger: TACCCAACGAAGAGGGTGCCACACCATTAGACTTAG...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCTAAGTCTAATGGTGTaGCACCCTCTTCGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHLSLMV*HPLRWV
Trigger: TACCCAACGAAGAGGGTGCCACACCATTAGACTTAG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCGTCTTCCACCAGCTTaGAGTGTCCTTCACGTAAAG +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMRLPPA*SVLHVK
Trigger: CTTTACGTGAAGGACACTCCAAGCTGGTGGAAGACG...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGTTCTTTCCTCTGGCCTaGCTTCTGGCTCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMFFPLA*LLAQRP
Trigger: AGGCCTTTGAGCCAGAAGCCAGGCCAGAGGAAAGAA...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTAAATCTAGGCTGTGCTaGTCTTCATGTTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFKSRLC*SSCSLC
Trigger: ACACAATGAACATGAAGACCAGCACAGCCTAGATTT...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTATCTCTTGGAATTTCTTaGTGCATGCAGGCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLSLGIS*CMQAQH
Trigger: ATGCTGCGCCTGCATGCACCAAGAAATTCCAAGAGA...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATAACACTTCTGGACAATaGATGGACCTGTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHNTSGQ*MDLSHS
Trigger: ACTGTGGGACAGGTCCATCCATTGTCCAGAAGTGTT...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCAGGGAGAAGAGCCCATaGACTGTAGCAGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSREKSP*TVAAHQ
Trigger: CTGATGAGCTGCTACAGTCCATGGGCTCTTCTCCCT...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTACAACAGAATGCATTCTaGAATTCCTCGGCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: IHSTQEPTIQRDNFLFKLQQNAF*NSSASS
Trigger: GCTCGACGCCGAGGAATTCCAGAATGCATTCTGTTG...TAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGCAACAGAATGCATTCTaGAATTCCTCGGCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMQQNAF*NSSASS
Trigger: GCTCGACGCCGAGGAATTCCAGAATGCATTCTGTTG...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp ATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATCTTTCTACAGCCTGCTaGATCCGTCTCATCCAGTTA +
Preference number: 4 (lower is better)
Translates to: IYSHAREDFDSLYTRANHLSTAC*IRLIQL
Trigger: TAACTGGATGAGACGGATCCAGCAGGCTGTAGAAAG...ATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATGGTTTAATAAGGAGGTaGGGCTCTAGATGGACGTCC +
Preference number: 4 (lower is better)
Translates to: LHKSQPFRGTTSCSNYTDGLIRR*GSRWTS
Trigger: GGACGTCCATCTAGAGCCCCACCTCCTTATTAAACC...ATCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGGTTTAATAAGGAGGTaGGGCTCTAGATGGACGTCC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMGLIRR*GSRWTS
Trigger: GGACGTCCATCTAGAGCCCCACCTCCTTATTAAACC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTACTGGGGAGGCTCGCCTaGGTCAGGTTTAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLLGRLA*VRFNKE
Trigger: CTCCTTATTAAACCTGACCCAGGCGAGCCTCCCCAG...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTGTGAATTTGAGTCATaGGGGGTTGGGGACTCAGTG +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMCEFES*GVGDSV
Trigger: CACTGAGTCCCCAACCCCCCATGACTCAAATTCACA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGTTGGGGACTCAGTGTaGGAGGTGTCCAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMVGDSV*EVSKSF
Trigger: GAAAGATTTGGACACCTCCCACACTGAGTCCCCAAC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCTGCGCTCTGCAATCATaGCATGTCGCTGATGAGATC +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSCALQS*HVADEI
Trigger: GATCTCATCAGCGACATGTCATGATTGCAGAGCGCA...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACAGAAGAGATTCTCTGTaGGAAGATACTTCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: LGRTLIHSTQEPTIQRDNRRDSL*EDTSSE
Trigger: TTCACTTGAAGTATCTTCTCACAGAGAATCTCTTCT...GTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTAGAAGAGATTCTCTGTaGGAAGATACTTCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFRRDSL*EDTSSE
Trigger: TTCACTTGAAGTATCTTCTCACAGAGAATCTCTTCT...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAGGGGACCATCTGCCCTaGAAATTTGTGACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLGDHLP*KFVTSS
Trigger: GGAAGACGTCACAAATTTTCAGGGCAGATGGTCCCC...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTACTGGCTCAAAGGCCTTaGCAAGAAAGGCTCTATCCC +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLLAQRP*QERLYP
Trigger: GGGATAGAGCCTTTCTTGTCAAGGCCTTTGAGCCAG...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTCCAAATCACCAACCTaGTCAATCACCATACAGTTA +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVSKSPT*SITIQL
Trigger: TAACTGTATGGTGATTGATCAGGTTGGTGATTTGGA...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTGGGATGTCTCTAAATaGAGAATTTCCAAGGATGGT +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVWDVSK*RISKDG
Trigger: ACCATCCTTGGAAATTCTTCATTTAGAGACATCCCA...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAAGCAGCTCATCAGAATaGGACCTGCTTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLSSSSE*DLLLQL
Trigger: CAGCTGCAGAAGCAGGTCTCATTCTGATGAGCTGCT...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp GGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTAACAGCTTCTTTATaGTGGCAACAGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRTLIHSTQEPTIQRDNFLTASL*WQQNSP
Trigger: TGGAGAATTCTGTTGCCATCATAAAGAAGCTGTTAA...GAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTACACATGTCCATTTTTaGGCTTCGTGTATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFTHVHF*ASCMFC
Trigger: ACAAAACATACACGAAGCTCAAAAATGGACATGTGT...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp GATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTTTGAAGGGAAATAACTaGTGGCTTCTGATCAACGGC +
Preference number: 4 (lower is better)
Translates to: DSLYTRANHSEGQLLVQTLKGNN*WLLING
Trigger: GCCGTTGATCAGAAGCCATCAGTTATTTCCCTTCAA...AGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCTAGCAATAAGCTTTTaGAGGGAAATAACTGATGGC +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVLAISF*REITDG
Trigger: GCCATCAGTTATTTCCCTTCAAAAGCTTATTGCTAG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp ATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTACTCAGGACCAGCAGATaGAGCACTGATCAGAAACAT +
Preference number: 4 (lower is better)
Translates to: IHSTQEPTIQRDNFLFKLLRTSR*STDQKH
Trigger: ATGTTTCTGATCAGTGCTTCATCTGCTGGTCCTGAG...TAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAACAACTGTCCTCACATaGTTGACTCACGGCGCCCAT +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLTTVLT*LTHGAH
Trigger: ATGGGCGCCGTGAGTCAATCATGTGAGGACAGTTGT...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAACCTTGAGGTCTACTTaGTGTTCACTAGTCCTCACC +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSETLRST*CSLVLT
Trigger: GGTGAGGACTAGTGAACATCAAGTAGACCTCAAGGT...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGACCTTGAGGTCTACTTaGTGTTCACTAGTCCTCACC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMTLRST*CSLVLT
Trigger: GGTGAGGACTAGTGAACATCAAGTAGACCTCAAGGT...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGGAGAAGGGTCCACCTTaGGGTCTACTTGATGTTCAC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMEKGPP*GLLDVH
Trigger: GTGAACATCAAGTAGACCTCAAGGTGGACCCTTCTC...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAATCCACAGTTTGTGACTaGCATTCGAAGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LIHSTQEPTIQRDNFLFKSTVCD*HSKAEK
Trigger: CTTCTCAGCCTTCGAATGTCAGTCACAAACTGTGGA...TTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTCCACAGTTTGTGACTaGCATTCGAAGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMSTVCD*HSKAEK
Trigger: CTTCTCAGCCTTCGAATGTCAGTCACAAACTGTGGA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTACAACACGTGCCCAGTTaGATAGTGACTGTAACAGAT +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLQHVPS*IVTVTD
Trigger: ATCTGTTACAGTCACTATTCAACTGGGCACGTGTTG...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp AGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTCACAAACCAAACACTaGAGAACCCCAGAGAATGTT +
Preference number: 4 (lower is better)
Translates to: RTLIHSTQEPTIQRDNFLSQTKH*RTPENV
Trigger: AACATTCTCTGGGGTTCTGCAGTGTTTGGTTTGTGA...CAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTACCTTTGTGCACATTTaGATTACAGTTAGAACACTG +
Preference number: 4 (lower is better)
Translates to: LVSHTETHTTRKAGYASFTFVHI*ITVRTL
Trigger: CAGTGTTCTAACTGTAATGCAAATGTGCACAAAGGT...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAAATGAGACCTGCTTCTaGAGCTGTTATGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRNETCF*SCYGHS
Trigger: AGAGTGACCATAACAGCTGCAGAAGCAGGTCTCATT...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAAATGAGACCTGCTTCTaGAGCTGTTATGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLNETCF*SCYGHS
Trigger: AGAGTGACCATAACAGCTGCAGAAGCAGGTCTCATT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp CACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACCATCAGAATGAGACCTaGTTCTGCAGCTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: HSTQEPTIQRDNFLFKLYHQNET*FCSCYG
Trigger: ACCATAACAGCTGCAGAAGCAGGTCTCATTCTGATG...GTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAAGACTCCAAGATTCTaGTTCAAACTCCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: HSTQEPTIQRDNFLFKLYKTPRF*FKLLGI
Trigger: GATGCCCAGGAGTTTGAAGCAGAATCTTGGAGTCTT...GTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAAAGACTCCAAGATTCTaGTTCAAACTCCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLKTPRF*FKLLGI
Trigger: GATGCCCAGGAGTTTGAAGCAGAATCTTGGAGTCTT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp CCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACATGACATCCTTCTCCTaGCTATTACAAAATGAGGGA +
Preference number: 4 (lower is better)
Translates to: PIYSHAREDFDSLYTRANMTSFS*LLQNEG
Trigger: TCCCTCATTTTGTAATAGGCAGGAGAAGGATGTCAT...GTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAAAATTTTATCCACGGTaGTGTGGTCCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEKFYPR*CGPAAA
Trigger: AGCTGCAGCTGGACCACAGCACCGTGGATAAAATTT...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGAAATTTTATCCACGGTaGTGTGGTCCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMKFYPR*CGPAAA
Trigger: AGCTGCAGCTGGACCACAGCACCGTGGATAAAATTT...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGTCTCATCCAGTTATTaGGTTCCTCCTTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRVSSSY*VPPWNW
Trigger: CCAATTCCAAGGAGGAACGCAATAACTGGATGAGAC...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAGTCTCATCCAGTTATTaGGTTCCTCCTTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLVSSSY*VPPWNW
Trigger: CCAATTCCAAGGAGGAACGCAATAACTGGATGAGAC...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCCAACTTTCTACAGCCTaGTGGATCCGTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSQLSTA*WIRLIQ
Trigger: CTGGATGAGACGGATCCAGCAGGCTGTAGAAAGTTG...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAAGACACAAGAAGAACTaGGAAAGTTTAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSERHKKN*ESLARP
Trigger: GGGCCTGGCTAAACTTTCCCAGTTCTTCTTGTGTCT...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCCGTCTTCCACCAGCTTaGAGTGTCCTTCACGTAAAG +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSRLPPA*SVLHVK
Trigger: CTTTACGTGAAGGACACTCCAAGCTGGTGGAAGACG...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATGACATTTTCACTAAGTaGGTACACACTGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHDIFTK*VHTGTG
Trigger: ACCAGTCCCAGTGTGTACCCACTTAGTGAAAATGTC...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAGGAGCTCTGAGACCCTaGAGTGTAACAGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLGALRP*SVTDVG
Trigger: TCCCACATCTGTTACACTCCAGGGTCTCAGAGCTCC...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCTTCCAAGGTGGTGCCTaGAACACTTCTGGACAATGG +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSFQGGA*NTSGQW
Trigger: CCATTGTCCAGAAGTGTTCCAGGCACCACCTTGGAA...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTTCTGCAGCTGTTATaGTCACTCTCAGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: LIHSTQEPTIQRDNFLFKLLQLL*SLSDSK
Trigger: CTTGGAGTCTGAGAGTGACCATAACAGCTGCAGAAG...TTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAACTTTCTACAGCCTGCTaGATCCGTCTCATCCAGTTA +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSELSTAC*IRLIQL
Trigger: TAACTGGATGAGACGGATCCAGCAGGCTGTAGAAAG...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGGGTTTAATAAGGAGGTaGGGCTCTAGATGGACGTCC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMGLIRR*GSRWTS
Trigger: GGACGTCCATCTAGAGCCCCACCTCCTTATTAAACC...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATTTTCCCCATCTTGTCTaGTCATTGTCCTTGTCGGTA +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHFPHLV*SLSLSV
Trigger: TACCGACAAGGACAATGACCAGACAAGATGGGGAAA...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTAAAACAATATTTTCTTTaGCTCCATCTCCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVKQYFL*LHLQFP
Trigger: GGGAAACTGGAGATGGAGCCAAAGAAAATATTGTTT...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTATGCCCTGAAAATTTGTaGCGTCTTCCACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLCPENL*RLPPAW
Trigger: CCAAGCTGGTGGAAGACGTCACAAATTTTCAGGGCA...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCGGTCAGCGTTTCCGATaGGTGAATGTAATGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSGQRFR*VNVMQG
Trigger: TCCTTGCATTACATTCACTCATCGGAAACGCTGACC...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGAACCACCAGGCTTTTaGCACGCTTTATATCTTCCT +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMEPPGF*HALYLP
Trigger: AGGAAGATATAAAGCGTGTCAAAAGCCTGGTGGTTC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTATCATGTTCATTGTGTTaGACCACCAGGCTTTTGACA +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLSCSLC*TTRLLT
Trigger: TGTCAAAAGCCTGGTGGTTCAACACAATGAACATGA...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAAACTTGATGGTGACATaGAGGACTGCTGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLNLMVT*RTAGLQ
Trigger: CTGAAGCCCAGCAGTCCTTCATGTCACCATCAAGTT...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTACTTGCTTTTTGTCTTTaGTTTATTCCGAGGGCTAGT +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLLAFCL*FIPRAS
Trigger: ACTAGCCCTCGGAATAAATCAAAGACAAAAAGCAAG...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTGCCTATTACAAAATaGGGGATCCACCACAAGACT +
Preference number: 4 (lower is better)
Translates to: LIHSTQEPTIQRDNFLFKLPITK*GIHHKT
Trigger: AGTCTTGTGGTGGATCCCTCATTTTGTAATAGGCAG...TTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp TTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAAAACAGGGTCTGGATGTaGTGCATCTCTGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: LIHSTQEPTIQRDNFLFKNRVWM*CISVCI
Trigger: AATGCAAACAGAGATGCATCACATCCAGACCCTGTT...TTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAATTGAAGGGAAATAACTaGTGGCTTCTGATCAACGGC +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSELKGNN*WLLING
Trigger: GCCGTTGATCAGAAGCCATCAGTTATTTCCCTTCAA...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp AGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGCTAGCAATAAGCTTTTaGAGGGAAATAACTGATGGC +
Preference number: 4 (lower is better)
Translates to: RTLIHSTQEPTIQRDNFLLAISF*REITDG
Trigger: GCCATCAGTTATTTCCCTTCAAAAGCTTATTGCTAG...CAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCTCAGGACCAGCAGATaGAGCACTGATCAGAAACAT +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMLRTSR*STDQKH
Trigger: ATGTTTCTGATCAGTGCTTCATCTGCTGGTCCTGAG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATCCTGATGGATAACTaGTGGATTCAGTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: RFIPMLGRTLIHSTQEPTILMDN*WIQFVE
Trigger: TTCAACAAACTGAATCCATCAGTTATCCATCAGGAT...GGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGACCTTGAGGTCTACTTaGTGTTCACTAGTCCTCACC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMTLRST*CSLVLT
Trigger: GGTGAGGACTAGTGAACATCAAGTAGACCTCAAGGT...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAGAGAAGGGTCCACCTTaGGGTCTACTTGATGTTCAC +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLEKGPP*GLLDVH
Trigger: GTGAACATCAAGTAGACCTCAAGGTGGACCCTTCTC...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCTCCACAGTTTGTGACTaGCATTCGAAGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSSTVCD*HSKAEK
Trigger: CTTCTCAGCCTTCGAATGTCAGTCACAAACTGTGGA...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGATCTTGAAATCCAGATaGTTGGGTAGAAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVILKSR*LGRKCD
Trigger: GTCACATTTTCTACCCAATCATCTGGATTTCAAGAT...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCAACACGTGCCCAGTTaGATAGTGACTGTAACAGAT +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMQHVPS*IVTVTD
Trigger: ATCTGTTACAGTCACTATTCAACTGGGCACGTGTTG...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAATCCTCGATGCGCTCTaGAATCATGACATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLILDAL*NHDMSL
Trigger: CAGCGACATGTCATGATTGCAGAGCGCATCGAGGAT...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp GATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTTCCAAATCTAGGCTGTaGTGGTCTTCATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: DSLYTRANHSEGQLLVQTSKSRL*WSSCSL
Trigger: CAATGAACATGAAGACCAGCACAGCCTAGATTTGGA...AGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTATCCAAATCTAGGCTGTaGTGGTCTTCATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLSKSRL*WSSCSL
Trigger: CAATGAACATGAAGACCAGCACAGCCTAGATTTGGA...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp AGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTACCTTTGTGCACATTTaGATTACAGTTAGAACACTG +
Preference number: 4 (lower is better)
Translates to: REDFDSLYTRANHSEGQLTFVHI*ITVRTL
Trigger: CAGTGTTCTAACTGTAATGCAAATGTGCACAAAGGT...AAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCTTGGAATTTCTTGGTaGATGCAGGCGCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMLGISW*MQAQHL
Trigger: AAGATGCTGCGCCTGCATGCACCAAGAAATTCCAAG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTACCAGCACAGGATTCCTaGCTTCGTTCCTTCATACTG +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLPAQDS*LRSFIL
Trigger: CAGTATGAAGGAACGAAGGCAGGAATCCTGTGCTGG...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTCACTCATCAGTGCCTaGTTCCTAAACACATGTCCA +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMSLISA*FLNTCP
Trigger: TGGACATGTGTTTAGGAAGCAGGCACTGATGAGTGA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTACTTCTGATCAACGGCTaGAAAGATGTATTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLLLING*KDVFLV
Trigger: GACCAGAAATACATCTTTGCAGCCGTTGATCAGAAG...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCTAAGTCTAATGGTGTaGCACCCTCTTCGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMLSLMV*HPLRWV
Trigger: TACCCAACGAAGAGGGTGCCACACCATTAGACTTAG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGAAGAAAGATTCAAGTTaGAAGCACACGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVKKDSS*KHTNLM
Trigger: CATCAAGTTCGTGTGCTTCCAACTTGAATCTTTCTT...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTCCAAGGATGGTCTGTaGTTTGTTCTTGTTATATTT +
Preference number: 4 (lower is better)
Translates to: LGRTLIHSTQEPTIQRDNSKDGL*FVLVIF
Trigger: AAATATAACAAGAACAAACCACAGACCATCCTTGGA...GTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCAAGGATGGTCTGTaGTTTGTTCTTGTTATATTT +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVSKDGL*FVLVIF
Trigger: AAATATAACAAGAACAAACCACAGACCATCCTTGGA...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCTTCTGCAGCTGTTATaGTCACTCTCAGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMLLQLL*SLSDSK
Trigger: CTTGGAGTCTGAGAGTGACCATAACAGCTGCAGAAG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCCTTTCTACAGCCTGCTaGATCCGTCTCATCCAGTTA +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSLSTAC*IRLIQL
Trigger: TAACTGGATGAGACGGATCCAGCAGGCTGTAGAAAG...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAAGACATTGCTGAATTTTaGCCACTCTGGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LIHSTQEPTIQRDNFLFKDIAEF*PLWLQL
Trigger: AAGCTGAAGCCAGAGTGGCCAAAATTCAGCAATGTC...TTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGGACATTGCTGAATTTTaGCCACTCTGGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMDIAEF*PLWLQL
Trigger: AAGCTGAAGCCAGAGTGGCCAAAATTCAGCAATGTC...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGGACATTGCTGAATTTTaGCCACTCTGGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMDIAEF*PLWLQL
Trigger: AAGCTGAAGCCAGAGTGGCCAAAATTCAGCAATGTC...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGACATTGCTGAATTTTaGCCACTCTGGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEDIAEF*PLWLQL
Trigger: AAGCTGAAGCCAGAGTGGCCAAAATTCAGCAATGTC...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGGTTGGGGACTCAGTGTaGGAGGTGTCCAAATCATTT +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMVGDSV*EVSKSF
Trigger: AAATGATTTGGACACCTCCCACACTGAGTCCCCAAC...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426542.6
CDS-3UTR CCA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTAAAACTTAATGAGGAGTaGGCAGTTTTGTCCTTAAAA +
Preference number: 4 (lower is better)
Translates to: CLETPPALGLGTKQVRTVKLNEE*AVLSLK
Trigger: TTTTAAGGACAAAACTGCCCACTCCTCATTAAGTTT...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAGCAAGAATAAGAACGTaGGCGAACTCCAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLARIRT*ANSRKQ
Trigger: CTGCTTTCTGGAGTTCGCTCACGTTCTTATTCTTGC...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TCATCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACACTTGCTTTTTGTCTTTaGTTTATTCCGAGGGCTAGT +
Preference number: 4 (lower is better)
Translates to: SSVPIYSHAREDFDSLYTLAFCL*FIPRAS
Trigger: ACTAGCCCTCGGAATAAATCAAAGACAAAAAGCAAG...TGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp TCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGATGGGATGTCTCTAAATaGAGAATTTCCAAGGATGGT +
Preference number: 4 (lower is better)
Translates to: SVPIYSHAREDFDSLYTRWDVSK*RISKDG
Trigger: ACCATCCTTGGAAATTCTTCATTTAGAGACATCCCA...TCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCCTGCCTATTACAAAATaGGGGATCCACCACAAGACT +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSLPITK*GIHHKT
Trigger: AGTCTTGTGGTGGATCCCTCATTTTGTAATAGGCAG...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCAACAGGGTCTGGATGTaGTGCATCTCTGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSNRVWM*CISVCI
Trigger: AATGCAAACAGAGATGCATCACATCCAGACCCTGTT...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp AGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTATTTTGTAATACGCTaGGTGACCAACAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: RTLIHSTQEPTIQRDNFLYFVIR*VTNRMH
Trigger: ATGCATTCTGTTGGTCACTCAGCGTATTACAAAATA...CAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTATATTTTGTAATACGCTaGGTGACCAACAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLYFVIR*VTNRMH
Trigger: ATGCATTCTGTTGGTCACTCAGCGTATTACAAAATA...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGTTGAAGGGAAATAACTaGTGGCTTCTGATCAACGGC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMLKGNN*WLLING
Trigger: GCCGTTGATCAGAAGCCATCAGTTATTTCCCTTCAA...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCTATTTACATCAAAATaGCTTGATGGGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMLFTSK*LDGGSG
Trigger: CCCAGAGCCCCCATCAAGTCATTTTGATGTAAATAG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTCACAAACCAAACACTaGAGAACCCCAGAGAATGTT +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMSQTKH*RTPENV
Trigger: AACATTCTCTGGGGTTCTGCAGTGTTTGGTTTGTGA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCATCAGAATGAGACCTaGTTCTGCAGCTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMHQNET*FCSCYG
Trigger: ACCATAACAGCTGCAGAAGCAGGTCTCATTCTGATG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTATTAAGCAAAGCGCTTTaGGTAAGTCTTTATGTTCCT +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLLSKAL*VSLYVP
Trigger: AGGAACATAAAGACTTACGCAAAGCGCTTTGCTTAA...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp TCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGACTTCTGATCAACGGCTaGAAAGATGTATTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: STQEPTIQRDNFLFKLYRLLING*KDVFLV
Trigger: GACCAGAAATACATCTTTGCAGCCGTTGATCAGAAG...TCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGCTTCTGATCAACGGCTaGAAAGATGTATTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMLLING*KDVFLV
Trigger: GACCAGAAATACATCTTTGCAGCCGTTGATCAGAAG...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGGTCTCATCCAGTTATTaGGTTCCTCCTTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMVSSSY*VPPWNW
Trigger: CCAATTCCAAGGAGGAACGCAATAACTGGATGAGAC...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTATACAAGAATCCTTGCTaGTTTCATGGAAAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: GRICQFSFVEKCIQAANLYKNPC*FHGKEV
Trigger: TACTTCCTTTCCATGAAAGCAGCAAGGATTCTTGTA...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAAAATCTAGGCTGTGCTaGTCTTCATGTTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLKSRLC*SSCSLC
Trigger: ACACAATGAACATGAAGACCAGCACAGCCTAGATTT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAAACACTTCTGGACAATaGATGGACCTGTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLNTSGQ*MDLSHS
Trigger: ACTGTGGGACAGGTCCATCCATTGTCCAGAAGTGTT...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTACTTTCTACAGCCTGCTaGATCCGTCTCATCCAGTTA +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLLSTAC*IRLIQL
Trigger: TAACTGGATGAGACGGATCCAGCAGGCTGTAGAAAG...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CATCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAACTGATTTGGCAGGTATaGTGTATTTATCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: HQYRFIPMLGRTLIHSTQLIWQV*CIYPIL
Trigger: AAGAATGGGATAAATACATCATACCTGCCAAATCAG...TTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCTGATTTGGCAGGTATaGTGTATTTATCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHLIWQV*CIYPIL
Trigger: AAGAATGGGATAAATACATCATACCTGCCAAATCAG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTTGCTTTTTGTCTTTaGTTTATTCCGAGGGCTAGT +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMLAFCL*FIPRAS
Trigger: ACTAGCCCTCGGAATAAATCAAAGACAAAAAGCAAG...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGTGGGATGTCTCTAAATaGAGAATTTCCAAGGATGGT +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMWDVSK*RISKDG
Trigger: ACCATCCTTGGAAATTCTTCATTTAGAGACATCCCA...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp TCATCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAACACATGTCCATTTTTaGGCTTCGTGTATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SSVPIYSHAREDFDSLYTTHVHF*ASCMFC
Trigger: ACAAAACATACACGAAGCTCAAAAATGGACATGTGT...TGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR TCA 90 bp AGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAATGCTAGCAATAAGCTTTTaGAGGGAAATAACTGATGGC +
Preference number: 4 (lower is better)
Translates to: RICQFSFVEKCIQAANLMLAISF*REITDG
Trigger: GCCATCAGTTATTTCCCTTCAAAAGCTTATTGCTAG...CATTAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTAGCAATAAGCTTTTaGAGGGAAATAACTGATGGC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMLAISF*REITDG
Trigger: GCCATCAGTTATTTCCCTTCAAAAGCTTATTGCTAG...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATCTTGAAATCCAGATaGTTGGGTAGAAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLILKSR*LGRKCD
Trigger: GTCACATTTTCTACCCAATCATCTGGATTTCAAGAT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGAAAGTTCACCCCTTGTaGATACCACTCTTTAAATCC +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMKVHPL*IPLFKS
Trigger: GGATTTAAAGAGTGGTATTCACAAGGGGTGAACTTT...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAACCTTTGTGCACATTTaGATTACAGTTAGAACACTG +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLTFVHI*ITVRTL
Trigger: CAGTGTTCTAACTGTAATGCAAATGTGCACAAAGGT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAATGACATCCTTCTCCTaGCTATTACAAAATGAGGGA +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEMTSFS*LLQNEG
Trigger: TCCCTCATTTTGTAATAGGCAGGAGAAGGATGTCAT...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR GCA 90 bp GATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTTTAAGCAAAGCGCTTTaGGTAAGTCTTTATGTTCCT +
Preference number: 4 (lower is better)
Translates to: DSLYTRANHSEGQLLVQTLSKAL*VSLYVP
Trigger: AGGAACATAAAGACTTACGCAAAGCGCTTTGCTTAA...AGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATTTAAGCAAAGCGCTTTaGGTAAGTCTTTATGTTCCT +
Preference number: 4 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHLSKAL*VSLYVP
Trigger: AGGAACATAAAGACTTACGCAAAGCGCTTTGCTTAA...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTATCACTCATCAGTGCCTaGTTCCTAAACACATGTCCA +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLSLISA*FLNTCP
Trigger: TGGACATGTGTTTAGGAAGCAGGCACTGATGAGTGA...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp GATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTTACAAGAATCCTTGCTaGTTTCATGGAAAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: DSLYTRANHSEGQLLVQTYKNPC*FHGKEV
Trigger: TACTTCCTTTCCATGAAAGCAGCAAGGATTCTTGTA...AGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR GCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTATCGGAAGGCAGGATATaGCAGTTTTCCTTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLSEGRI*QFSFVE
Trigger: TTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGA...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATAAATCTAGGCTGTGCTaGTCTTCATGTTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: LHKSQPFRGTTSCSNYTDKSRLC*SSCSLC
Trigger: ACACAATGAACATGAAGACCAGCACAGCCTAGATTT...ATCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTATATTGCGTTCCTCCTTaGAATTGGTGTGAATTTCAT +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLYCVPP*NWCEFH
Trigger: ATGAAATTCACACCAATTCCAAGGAGGAACGCAATA...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTATTTCCCCATCTTGTCTaGTCATTGTCCTTGTCGGTA +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLFPHLV*SLSLSV
Trigger: TACCGACAAGGACAATGACCAGACAAGATGGGGAAA...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAAAACAATATTTTCTTTaGCTCCATCTCCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLKQYFL*LHLQFP
Trigger: GGGAAACTGGAGATGGAGCCAAAGAAAATATTGTTT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTATCATGTTCATTGTGTTaGACCACCAGGCTTTTGACA +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLSCSLC*TTRLLT
Trigger: TGTCAAAAGCCTGGTGGTTCAACACAATGAACATGA...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAACTGATTTGGCAGGTATaGTGTATTTATCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSELIWQV*CIYPIL
Trigger: AAGAATGGGATAAATACATCATACCTGCCAAATCAG...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTTAACAGCTTCTTTATaGTGGCAACAGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMLTASL*WQQNSP
Trigger: TGGAGAATTCTGTTGCCATCATAAAGAAGCTGTTAA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGACACATGTCCATTTTTaGGCTTCGTGTATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMTHVHF*ASCMFC
Trigger: ACAAAACATACACGAAGCTCAAAAATGGACATGTGT...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGATCCTGATGGATAACTaGTGGATTCAGTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMILMDN*WIQFVE
Trigger: TTCAACAAACTGAATCCATCAGTTATCCATCAGGAT...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCAAAGTTCACCCCTTGTaGATACCACTCTTTAAATCC +
Preference number: 4 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSKVHPL*IPLFKS
Trigger: GGATTTAAAGAGTGGTATTCACAAGGGGTGAACTTT...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTATCACAAACCAAACACTaGAGAACCCCAGAGAATGTT +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLSQTKH*RTPENV
Trigger: AACATTCTCTGGGGTTCTGCAGTGTTTGGTTTGTGA...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGACCTTTGTGCACATTTaGATTACAGTTAGAACACTG +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMTFVHI*ITVRTL
Trigger: CAGTGTTCTAACTGTAATGCAAATGTGCACAAAGGT...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR GCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTACAAGAATCCTTGCTaGTTTCATGGAAAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMYKNPC*FHGKEV
Trigger: TACTTCCTTTCCATGAAAGCAGCAAGGATTCTTGTA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAATACAAGAATCCTTGCTaGTTTCATGGAAAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEYKNPC*FHGKEV
Trigger: TACTTCCTTTCCATGAAAGCAGCAAGGATTCTTGTA...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CCA 90 bp TTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAAAAGAAAGATTCAAGTTaGAAGCACACGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: LIHSTQEPTIQRDNFLFKKKDSS*KHTNLM
Trigger: CATCAAGTTCGTGTGCTTCCAACTTGAATCTTTCTT...TTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp TCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATATTGCGTTCCTCCTTaGAATTGGTGTGAATTTCAT +
Preference number: 4 (lower is better)
Translates to: STQEPTIQRDNFLFKLYRYCVPP*NWCEFH
Trigger: ATGAAATTCACACCAATTCCAAGGAGGAACGCAATA...TCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTATTGCGTTCCTCCTTaGAATTGGTGTGAATTTCAT +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMYCVPP*NWCEFH
Trigger: ATGAAATTCACACCAATTCCAAGGAGGAACGCAATA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGAAGAGATTCTCTGTaGGAAGATACTTCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMRRDSL*EDTSSE
Trigger: TTCACTTGAAGTATCTTCTCACAGAGAATCTCTTCT...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGTATTTTGTAATACGCTaGGTGACCAACAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMYFVIR*VTNRMH
Trigger: ATGCATTCTGTTGGTCACTCAGCGTATTACAAAATA...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGATCTTGAAATCCAGATaGTTGGGTAGAAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMILKSR*LGRKCD
Trigger: GTCACATTTTCTACCCAATCATCTGGATTTCAAGAT...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR GCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAGCTCTTCACTTGAACTaGATACTGTTAATTCACGCA +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLALHLN*ILLIHA
Trigger: TGCGTGAATTAACAGTATGCAGTTCAAGTGAAGAGC...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTCCAAGGATGGTCTGTaGTTTGTTCTTGTTATATTT +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMSKDGL*FVLVIF
Trigger: AAATATAACAAGAACAAACCACAGACCATCCTTGGA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CCA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGAAACTTAATGAGGAGTaGGCAGTTTTGTCCTTAAAA +
Preference number: 4 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMKLNEE*AVLSLK
Trigger: TTTTAAGGACAAAACTGCCCACTCCTCATTAAGTTT...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAAGAAGAGATTCTCTGTaGGAAGATACTTCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLRRDSL*EDTSSE
Trigger: TTCACTTGAAGTATCTTCTCACAGAGAATCTCTTCT...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR TCA 90 bp TGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACACAAAAACTAATCTTGAAATCCAGATaGTTGGGTAGAAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: CNRSPLLMLPEEMSTQKLILKSR*LGRKCD
Trigger: GTCACATTTTCTACCCAATCATCTGGATTTCAAGAT...TAGTTTTTGTGTGCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS GCA 90 bp CGCTCCCGCTCCTGCAGCCAGCTCTCCCTGGTCGCCTGCGCCCGCTaGTGCTGCTCACACCTGCGCAGCCAGCGCCGCTGCTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RSRSCSQLSLVACAR*CCSHLRSQRRCSCW
Trigger: CCAGCAGGAGCAGCGGCGCTGGCTGCGCAGGTGTGAGCAGCAGCAGCGGGCGCAGGCGACCAGGGAGAGCTGGCTGCAGGAGCGGGAGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000503341.1
ENST00000512883.1
ENST00000513042.7
ENST00000545377.5
CDS GCA 90 bp CGCTCCTGCAGCCAGCTCTCCCTGGTCGCCTGCGCCCGCTGCTGCTaGTCACACCTGCGCAGCCAGCGCCGCTGCTCCTGCTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RSCSQLSLVACARCC*SHLRSQRRCSCWSW
Trigger: CCAGCTCCAGCAGGAGCAGCGGCGCTGGCTGCGCAGGTGTGAGCAGCAGCAGCGGGCGCAGGCGACCAGGGAGAGCTGGCTGCAGGAGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000503341.1
ENST00000512883.1
ENST00000513042.7
ENST00000545377.5
CDS GCA 90 bp GGCAGGCTCCTCTGCCGGCCGTGCTTCCAGTGGCCCAGCAGGCTCTaGTGGGCCCGCATCCTCGCCTGCTCCCTCTCCACCAGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: GRLLCRPCFQWPSRL*WARILACSLSTRRW
Trigger: CCAGCGCCTGGTGGAGAGGGAGCAGGCGAGGATGCGGGCCCAGCAGAGCCTGCTGGGCCACTGGAAGCACGGCCGGCAGAGGAGCCTGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000503341.1
ENST00000512883.1
ENST00000513042.7
ENST00000545377.5
CDS GCA 90 bp ATTACCTCGGGGCCACCCGGAAGGAGCACCGCGGGCAGGCTCCTCTaGCGGCCGTGCTTCCAGTGGCCCAGCAGGCTCTGCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: ITSGPPGRSTAGRLL*RPCFQWPSRLCWAR
Trigger: GCGGGCCCAGCAGAGCCTGCTGGGCCACTGGAAGCACGGCCGGCAGAGGAGCCTGCCCGCGGTGCTCCTTCCGGGTGGCCCCGAGGTAAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000503341.1
ENST00000512883.1
ENST00000513042.7
ENST00000545377.5
CDS CCA 90 bp AGGCTCCTCTGCCGGCCGTGCTTCCAGTGGCCCAGCAGGCTCTGCTaGGCCCGCATCCTCGCCTGCTCCCTCTCCACCAGGCGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RLLCRPCFQWPSRLC*ARILACSLSTRRWP
Trigger: GGGCCAGCGCCTGGTGGAGAGGGAGCAGGCGAGGATGCGGGCCCAGCAGAGCCTGCTGGGCCACTGGAAGCACGGCCGGCAGAGGAGCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000503341.1
ENST00000512883.1
ENST00000513042.7
ENST00000545377.5
CDS CCA 90 bp GGAAGGAGCACCGCGGGCAGGCTCCTCTGCCGGCCGTGCTTCCAGTaGCCCAGCAGGCTCTGCTGGGCCCGCATCCTCGCCTGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: GRSTAGRLLCRPCFQ*PSRLCWARILACSL
Trigger: GAGGGAGCAGGCGAGGATGCGGGCCCAGCAGAGCCTGCTGGGCCACTGGAAGCACGGCCGGCAGAGGAGCCTGCCCGCGGTGCTCCTTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000503341.1
ENST00000512883.1
ENST00000513042.7
ENST00000545377.5
CDS TCA 90 bp TCACACCTGCGCAGCCAGCGCCGCTGCTCCTGCTGGAGCTGGTGCTaGAGCTGGTGCACATTGGCCAGCTCCTCATGCTGCCTGTCCGCG +
Preference number: 5 (lower is better)
Translates to: SHLRSQRRCSCWSWC*SWCTLASSSCCLSA
Trigger: CGCGGACAGGCAGCATGAGGAGCTGGCCAATGTGCACCAGCTTCAGCACCAGCTCCAGCAGGAGCAGCGGCGCTGGCTGCGCAGGTGTGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000503341.1
ENST00000512883.1
ENST00000513042.7
ENST00000545377.5
CDS GCA 90 bp CCCAGGCAGGGGTCAAGGCGGGAGAAGCCGCACAAACACAGATGTTaGCACTGTTCCTCGGCCCACCCAGCCAACCAATGCGGGGACGCT +
Preference number: 5 (lower is better)
Translates to: PRQGSRREKPHKHRC*HCSSAHPANQCGDA
Trigger: AGCGTCCCCGCATTGGTTGGCTGGGTGGGCCGAGGAACAGTGGCAACATCTGTGTTTGTGCGGCTTCTCCCGCCTTGACCCCTGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509848.5
CDS CCA 90 bp GGCAGTGCTCCTGCCGTCAAGGCAAATGGGGTCAGCAGGGTCTGGTaGCTGCAGGCTGTGAGGCGATTGGCCTGCGTCACCAGCAGACGA +
Preference number: 5 (lower is better)
Translates to: GSAPAVKANGVSRVW*LQAVRRLACVTSRR
Trigger: TCGTCTGCTGGTGACGCAGGCCAATCGCCTCACAGCCTGCAGCCACCAGACCCTGCTGACCCCATTTGCCTTGACGGCAGGAGCACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296794.10
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000545377.5
CDS CCA 90 bp ACATTGGCCAGCTCCTCATGCTGCCTGTCCGCGTCGCGAGACTTCTaGTCCTGCAAGGGGCCGCCTCGGAGGATAGAGTGGCCGAGAGAC +
Preference number: 5 (lower is better)
Translates to: TLASSSCCLSASRDF*SCKGPPRRIEWPRD
Trigger: GTCTCTCGGCCACTCTATCCTCCGAGGCGGCCCCTTGCAGGACCAGAAGTCTCGCGACGCGGACAGGCAGCATGAGGAGCTGGCCAATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000503341.1
ENST00000512883.1
ENST00000513042.7
ENST00000545377.5
CDS GCA 90 bp GGCGGAGTTCAGGTGGTACTGCTCGCTTGCCCCCAGCTCACCTCCTaGTGTGCAGCCCAGACAGGTAACACTCTGCACCCTGGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: GGVQVVLLACPQLTS*CAAQTGNTLHPGVW
Trigger: CCAAACCCCAGGGTGCAGAGTGTTACCTGTCTGGGCTGCACAGCAGGAGGTGAGCTGGGGGCAAGCGAGCAGTACCACCTGAACTCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS TCA 90 bp CATGAGAGATGTGGATACAGACAAGGAGACCTTCACTGCCTGGCCTaGAGGGAGGGAAGGCACGACCGCGGGCTCGGGCAGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: HERCGYRQGDLHCLA*REGRHDRGLGQLQR
Trigger: CCTCTGCAGCTGCCCGAGCCCGCGGTCGTGCCTTCCCTCCCTTCAGGCCAGGCAGTGAAGGTCTCCTTGTCTGTATCCACATCTCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS GCA 90 bp CAGATGGGTCAGAGCCAGCACGAGCTCCTCATCCAAGGCAGGCAGTaGTCCTGCCGTCAAGGCAAATGGGGTCAGCAGGGTCTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: QMGQSQHELLIQGRQ*SCRQGKWGQQGLVA
Trigger: AGCCACCAGACCCTGCTGACCCCATTTGCCTTGACGGCAGGAGCACTGCCTGCCTTGGATGAGGAGCTCGTGCTGGCTCTGACCCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296794.10
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000545377.5
CDS GCA 90 bp GCCACTGATCTCACAGGAGGCGGAGTTCAGGTGGTACTGCTCGCTTaGCCCCAGCTCACCTCCTGCTGTGCAGCCCAGACAGGTAACACT +
Preference number: 5 (lower is better)
Translates to: ATDLTGGGVQVVLLA*PQLTSCCAAQTGNT
Trigger: AGTGTTACCTGTCTGGGCTGCACAGCAGGAGGTGAGCTGGGGGCAAGCGAGCAGTACCACCTGAACTCCGCCTCCTGTGAGATCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS GCA 90 bp CTAATGCTGCCACTGATCTCACAGGAGGCGGAGTTCAGGTGGTACTaGTCGCTTGCCCCCAGCTCACCTCCTGCTGTGCAGCCCAGACAG +
Preference number: 5 (lower is better)
Translates to: LMLPLISQEAEFRWY*SLAPSSPPAVQPRQ
Trigger: CTGTCTGGGCTGCACAGCAGGAGGTGAGCTGGGGGCAAGCGAGCAGTACCACCTGAACTCCGCCTCCTGTGAGATCAGTGGCAGCATTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS TCA 90 bp CAGCAGACGAGCCAGCCTGCAAGCCATGTTGTCCACGTAGGTCACTaGGCCAGAGCCCATGGTCACCGGAGAGTAACCTTCCGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: QQTSQPASHVVHVGH*ARAHGHRRVTFRAE
Trigger: CTCTGCTCGGAAGGTTACTCTCCGGTGACCATGGGCTCTGGCTCAGTGACCTACGTGGACAACATGGCTTGCAGGCTGGCTCGTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296794.10
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000545377.5
CDS-3UTR CAA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGGCACTCGGGAGAAGCTaGGGGACCATCTGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQALGRS*GTICPE
Trigger: TTCAGGGCAGATGGTCCCCAAGCTTCTCCCGAGTGC...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS CCA 90 bp GCCTGCAAGCCATGTTGTCCACGTAGGTCACTGAGCCAGAGCCCATaGTCACCGGAGAGTAACCTTCCGAGCAGAGGCACACAGATACCG +
Preference number: 5 (lower is better)
Translates to: ACKPCCPRRSLSQSP*SPESNLPSRGTQIP
Trigger: CGGTATCTGTGTGCCTCTGCTCGGAAGGTTACTCTCCGGTGACCATGGGCTCTGGCTCAGTGACCTACGTGGACAACATGGCTTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296794.10
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000545377.5
CDS CCA 90 bp ACCTTCTCCCCTGCATCAGAGACGGCCAAGTCGGTTACCACACCCTaGATCCCGGGATCCACATCCGAACAGCCTCTTCCTTCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: TFSPASETAKSVTTP*IPGSTSEQPLPSLP
Trigger: AGGGAGAGAAGGAAGAGGCTGTTCGGATGTGGATCCCGGGATCCAGGGTGTGGTAACCGACTTGGCCGTCTCTGATGCAGGGGAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000510312.6
ENST00000512883.1
ENST00000513042.7
ENST00000545377.5
CDS CCA 90 bp AGAACCCCCGCCCTAGAGGGATGGTTGGCGTTCTCGCTGCTCTTCTaGCTCTGTCGTGGCCCATCCACACTCCACTGCTTCTGTAGTAAG +
Preference number: 5 (lower is better)
Translates to: RTPALEGWLAFSLLF*LCRGPSTLHCFCSK
Trigger: CTTACTACAGAAGCAGTGGAGTGTGGATGGGCCACGACAGAGCCAGAAGAGCAGCGAGAACGCCAACCATCCCTCTAGGGCGGGGGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS-3UTR CAA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGGCACTCGGGAGAAGCTaGGGGACCATCTGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: FPTSSSAYVGTEATALTVALGRS*GTICPE
Trigger: TTCAGGGCAGATGGTCCCCAAGCTTCTCCCGAGTGC...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS CCA 90 bp AGGCTCTCAGCTTCTTTCAGTGCTGCTGCCAGTAATGAGGCTGCCTaGGGAGGCTCGCCTGGGTCAGGTTTAATAAGGAGGTGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: RLSASFSAAASNEAA*GGSPGSGLIRRWGS
Trigger: AGAGCCCCACCTCCTTATTAAACCTGACCCAGGCGAGCCTCCCCAGGCAGCCTCATTACTGGCAGCAGCACTGAAAGAAGCTGAGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000510312.6
ENST00000513042.7
ENST00000545377.5
CDS CCA 90 bp CCTCCTGAAGCTTTCCAAGGTGGTGCCTGGAACACTTCTGGACAATaGATGGACCTGTCCCACAGTCTCCCTCCTTCCAGTCGGCAATCC +
Preference number: 5 (lower is better)
Translates to: PPEAFQGGAWNTSGQ*MDLSHSLPPSSRQS
Trigger: GGATTGCCGACTGGAAGGAGGGAGACTGTGGGACAGGTCCATCCATTGTCCAGAAGTGTTCCAGGCACCACCTTGGAAAGCTTCAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000545377.5
CDS CCA 90 bp GGTGCTTGGATGAGCGCAGAGCAATGCATGTGGTCCCTGCCCACATaGGGCTTACACGCTAACAGACAGCAACTGACGAACCGCACAAAG +
Preference number: 5 (lower is better)
Translates to: GAWMSAEQCMWSLPT*GLHANRQQLTNRTK
Trigger: CTTTGTGCGGTTCGTCAGTTGCTGTCTGTTAGCGTGTAAGCCCCATGTGGGCAGGGACCACATGCATTGCTCTGCGCTCATCCAAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS CCA 90 bp GAAAAGAAACCAGACTCAGACGGTGGCCATAGTGGCGCGCGTAGCTaGGCTGCTCTAGATCCCACCACAGTCAGAGATCACCAGACCAGT +
Preference number: 5 (lower is better)
Translates to: EKKPDSDGGHSGARS*AALDPTTVRDHQTS
Trigger: ACTGGTCTGGTGATCTCTGACTGTGGTGGGATCTAGAGCAGCCCAGCTACGCGCGCCACTATGGCCACCGTCTGAGTCTGGTTTCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS-3UTR CAA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTGCACTCGGGAGAAGCTaGGGGACCATCTGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: TSSSAYVGTEATALTVKVALGRS*GTICPE
Trigger: TTCAGGGCAGATGGTCCCCAAGCTTCTCCCGAGTGC...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS GCA 90 bp GCTTTCCCAACACCCAGGAGAACACCACGACCAGGGAGCCAGAAGTaGCTGCACTGTACCTTGACATTGCTGAATTTTGGCCACTCTGGC +
Preference number: 5 (lower is better)
Translates to: AFPTPRRTPRPGSQK*LHCTLTLLNFGHSG
Trigger: GCCAGAGTGGCCAAAATTCAGCAATGTCAAGGTACAGTGCAGGCACTTCTGGCTCCCTGGTCGTGGTGTTCTCCTGGGTGTTGGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504003.1
CDS CCA 90 bp GTGACTAATGCTTCTTTCAGTGCTGCTGCCAGTAATGAGGCTGCCTaGGGAGGCTCGCCTGGGTCAGGTTTAATAAGGAGGTGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: VTNASFSAAASNEAA*GGSPGSGLIRRWGS
Trigger: AGAGCCCCACCTCCTTATTAAACCTGACCCAGGCGAGCCTCCCCAGGCAGCCTCATTACTGGCAGCAGCACTGAAAGAAGCATTAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512883.1
CDS CCA 90 bp TCTCATAGCACCATGTTCCAGTCTGACCCAGAACTGAAGAGGCCTTaGGGTACAGGACCCCACCAGCCAGCTTCGGTACTTCCTCTACCT +
Preference number: 5 (lower is better)
Translates to: SHSTMFQSDPELKRP*GTGPHQPASVLPLP
Trigger: AGGTAGAGGAAGTACCGAAGCTGGCTGGTGGGGTCCTGTACCCCAAGGCCTCTTCAGTTCTGGGTCAGACTGGAACATGGTGCTATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS CCA 90 bp GATTTTGCCCAATTGGTGTGGTCCGTGGTGAACCTCTATAACTCCTaGTGTGAGGAGATGTGTGGATACCCAGGCAGGGGTCAAGGCGGG +
Preference number: 5 (lower is better)
Translates to: DFAQLVWSVVNLYNS*CEEMCGYPGRGQGG
Trigger: CCCGCCTTGACCCCTGCCTGGGTATCCACACATCTCCTCACACCAGGAGTTATAGAGGTTCACCACGGACCACACCAATTGGGCAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509848.5
CDS-3UTR CAA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGTTACATCAAAATGACTaGATGGGGGCTCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQLHQND*MGALGL
Trigger: GAGGCCCAGAGCCCCCATCAAGTCATTTTGATGTAA...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS TCA 90 bp TACACACTGGGACTGGTTTCTGTAGGAAGGGTGTGTTTGCTGCTCTaGGGCCACAGAGTGCAACCTCTGGATTCAGGGCTGGTAGTGGCA +
Preference number: 5 (lower is better)
Translates to: YTLGLVSVGRVCLLL*GHRVQPLDSGLVVA
Trigger: TGCCACTACCAGCCCTGAATCCAGAGGTTGCACTCTGTGGCCTCAGAGCAGCAAACACACCCTTCCTACAGAAACCAGTCCCAGTGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000513841.1
ENST00000545377.5
CDS TCA 90 bp GAGAATCAAACTCTCATAGCACCATGTTCCAGTCTGACCCAGAACTaGAGAGGCCTTGGGGTACAGGACCCCACCAGCCAGCTTCGGTAC +
Preference number: 5 (lower is better)
Translates to: ENQTLIAPCSSLTQN*RGLGVQDPTSQLRY
Trigger: GTACCGAAGCTGGCTGGTGGGGTCCTGTACCCCAAGGCCTCTTCAGTTCTGGGTCAGACTGGAACATGGTGCTATGAGAGTTTGATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS GCA 90 bp GCTGCTCTAGATCCCACCACAGTCAGAGATCACCAGACCAGTGACTaGCATAGTAGAAGTACTAGCAGCAGAGGCCACGAACCAGCCACA +
Preference number: 5 (lower is better)
Translates to: AALDPTTVRDHQTSD*HSRSTSSRGHEPAT
Trigger: TGTGGCTGGTTCGTGGCCTCTGCTGCTAGTACTTCTACTATGGCAGTCACTGGTCTGGTGATCTCTGACTGTGGTGGGATCTAGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS CCA 90 bp AGTGAAGAACTTCCCAACACAGTCCACTCTAGAGGCAATTCCAGATaGGTCAGAGCCAGCACGAGCTCCTCATCCAAGGCAGGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SEELPNTVHSRGNSR*VRASTSSSSKAGSA
Trigger: AGCACTGCCTGCCTTGGATGAGGAGCTCGTGCTGGCTCTGACCCATCTGGAATTGCCTCTAGAGTGGACTGTGTTGGGAAGTTCTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296794.10
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000545377.5
CDS CCA 90 bp CTGAAGCTTTCCAAGGTGGTGCCTGGAACACTTCTGGACAATGGATaGACCTGTCCCACAGTCTCCCTCCTTCCAGTCGGCAATCCAACA +
Preference number: 5 (lower is better)
Translates to: LKLSKVVPGTLLDNG*TCPTVSLLPVGNPT
Trigger: TGTTGGATTGCCGACTGGAAGGAGGGAGACTGTGGGACAGGTCCATCCATTGTCCAGAAGTGTTCCAGGCACCACCTTGGAAAGCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000545377.5
CDS-3UTR CAA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTACGTCTTCCACCAGCTaGGAGTGTCCTTCACGTAAA +
Preference number: 5 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSTSSTS*ECPSRK
Trigger: TTTACGTGAAGGACACTCCAAGCTGGTGGAAGACGT...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGACGTCTTCCACCAGCTaGGAGTGTCCTTCACGTAAA +
Preference number: 5 (lower is better)
Translates to: FPTSSSAYVGTEATALTVTSSTS*ECPSRK
Trigger: TTTACGTGAAGGACACTCCAAGCTGGTGGAAGACGT...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTCTGGCTCAAAGGCCTaGACAAGAAAGGCTCTATCC +
Preference number: 5 (lower is better)
Translates to: SSAYVGTEATALTVKVHPSGSKA*TRKALS
Trigger: GGATAGAGCCTTTCTTGTCAAGGCCTTTGAGCCAGA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCTGGGCCTCTGGGCCTaGTTAAAAGATGATGCTGAA +
Preference number: 5 (lower is better)
Translates to: FPTSSSAYVGTEATALTVLGLWA*LKDDAE
Trigger: TTCAGCATCATCTTTTAACAAGGCCCAGAGGCCCAG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTTACATCAAAATGACTaGATGGGGGCTCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SSAYVGTEATALTVKVHPLHQND*MGALGL
Trigger: GAGGCCCAGAGCCCCCATCAAGTCATTTTGATGTAA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS GCA 90 bp CTTTACGTGACCACTGTAAGCTCCAGGGACTGTGCTCAGGCTCATTaGCAAGGCCTGCATTTTCACTTACAGGCAGTCGGTGATCCTGGT +
Preference number: 5 (lower is better)
Translates to: LYVTTVSSRDCAQAH*QGLHFHLQAVGDPG
Trigger: ACCAGGATCACCGACTGCCTGTAAGTGAAAATGCAGGCCTTGGCAATGAGCCTGAGCACAGTCCCTGGAGCTTACAGTGGTCACGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS CCA 90 bp GCTGCTGGAGAACCAGCCTGTGGATCTCAATGTGGCTGTCCTGAATaGTCAAGGCGGCCTGTCAGAGCAGACAGAGGAAAAATCACTGAA +
Preference number: 5 (lower is better)
Translates to: AAGEPACGSQCGCPE*SRRPVRADRGKITE
Trigger: TTCAGTGATTTTTCCTCTGTCTGCTCTGACAGGCCGCCTTGACCATTCAGGACAGCCACATTGAGATCCACAGGCTGGTTCTCCAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503341.1
CDS CCA 90 bp TCCTGCTGTGCAGCCCAGACAGGTAACACTCTGCACCCTGGGGTTTaGGGACCCCAGCCTAAGGGATCATCCAACCATTTAATCCTAAAT +
Preference number: 5 (lower is better)
Translates to: SCCAAQTGNTLHPGV*GPQPKGSSNHLILN
Trigger: ATTTAGGATTAAATGGTTGGATGATCCCTTAGGCTGGGGTCCCCAAACCCCAGGGTGCAGAGTGTTACCTGTCTGGGCTGCACAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS-3UTR CAA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCAGGCTGTGAGGCGATaGGCCTGCGTCACCAGCAGA +
Preference number: 5 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVQAVRR*ACVTSR
Trigger: TCTGCTGGTGACGCAGGCCAATCGCCTCACAGCCTG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGATGACATCCTGTCTTTaGATGACATCCTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQMTSCL*MTSFSC
Trigger: GCAGGAGAAGGATGTCATCAAAAGACAGGATGTCAT...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCGTCTCATCCAGTTATaGCGTTCCTCCTTGGAATTG +
Preference number: 5 (lower is better)
Translates to: FPTSSSAYVGTEATALTVRLIQL*RSSLEL
Trigger: CAATTCCAAGGAGGAACGCAATAACTGGATGAGACG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTCCAGTTTCCCCATCTaGTCTGGTCATTGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: FPTSSSAYVGTEATALTVSSFPI*SGHCPC
Trigger: ACAAGGACAATGACCAGACAAGATGGGGAAACTGGA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS TCA 90 bp CACCATACAGTTAGCGTAGACTTCATCACCTCCATTCAGCATGTCTaGAAGCCGGCCTGCAGCAAGCAATGTCGAGGGCGGCTTGGATTT +
Preference number: 5 (lower is better)
Translates to: HHTVSVDFITSIQHV*KPACSKQCRGRLGF
Trigger: AAATCCAAGCCGCCCTCGACATTGCTTGCTGCAGGCCGGCTTTCAGACATGCTGAATGGAGGTGATGAAGTCTACGCTAACTGTATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000545377.5
CDS GCA 90 bp CCGACATCAGACCCCTCTAAAGAGCCTCTCAATGGTTCTGGCAAATaGCACGGGTGTCCCTTTGAAACTCTCCCCAGTCATGAGAGATGT +
Preference number: 5 (lower is better)
Translates to: PTSDPSKEPLNGSGK*HGCPFETLPSHERC
Trigger: ACATCTCTCATGACTGGGGAGAGTTTCAAAGGGACACCCGTGGCATTTGCCAGAACCATTGAGAGGCTCTTTAGAGGGGTCTGATGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS CCA 90 bp GTAATGCAAGGAGGCTTCTTCACTGAGCTGCACTCGGGAGAAGCTTaGGGACCATCTGCCCTGAAAATTTGTGACGTCTTCCACCAGCTT +
Preference number: 5 (lower is better)
Translates to: VMQGGFFTELHSGEA*GPSALKICDVFHQL
Trigger: AAGCTGGTGGAAGACGTCACAAATTTTCAGGGCAGATGGTCCCCAAGCTTCTCCCGAGTGCAGCTCAGTGAAGAAGCCTCCTTGCATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296794.10
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000545377.5
CDS-3UTR CAA 90 bp AGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGCAGGCTGTGAGGCGATaGGCCTGCGTCACCAGCAGA +
Preference number: 5 (lower is better)
Translates to: RTLIHSTQEPTIQRDNFLQAVRR*ACVTSR
Trigger: TCTGCTGGTGACGCAGGCCAATCGCCTCACAGCCTG...CAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTTTCTCTTGGAATTTCTaGGTGCATGCAGGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: TSSSAYVGTEATALTVKVFSWNF*VHAGAA
Trigger: TGCTGCGCCTGCATGCACCAAGAAATTCCAAGAGAA...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGCTTCATCAGATTCACTaGTCCTTCCCCCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQLHQIH*SFPLFL
Trigger: AAGAAAAAGGGGGAAGGACAAGTGAATCTGATGAAG...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTACAACACGTGCCCAGTaGAATAGTGACTGTAACAGA +
Preference number: 5 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSTTRAQ*NSDCNR
Trigger: TCTGTTACAGTCACTATTCAACTGGGCACGTGTTGT...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS TCA 90 bp TCAGGCTCATTGCCAAGGCCTGCATTTTCACTTACAGGCAGTCGGTaGTCCTGGTACATCATGAGAACTGAGTGTGTCCGCCAAGACAGA +
Preference number: 5 (lower is better)
Translates to: SGSLPRPAFSLTGSR*SWYIMRTECVRQDR
Trigger: TCTGTCTTGGCGGACACACTCAGTTCTCATGATGTACCAGGATCACCGACTGCCTGTAAGTGAAAATGCAGGCCTTGGCAATGAGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCAGGCTGTGAGGCGATaGGCCTGCGTCACCAGCAGA +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHQAVRR*ACVTSR
Trigger: TCTGCTGGTGACGCAGGCCAATCGCCTCACAGCCTG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTTCATGTTCATTGTGTaGAACCACCAGGCTTTTGAC +
Preference number: 5 (lower is better)
Translates to: FPTSSSAYVGTEATALTVFMFIV*NHQAFD
Trigger: GTCAAAAGCCTGGTGGTTCAACACAATGAACATGAA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTCGACTGTAGATTACTaGATAGAGGAAGGGATTCAG +
Preference number: 5 (lower is better)
Translates to: FPTSSSAYVGTEATALTVSTVDY*IEEGIQ
Trigger: CTGAATCCCTTCCTCTATCAAGTAATCTACAGTCGA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTCGACTGTAGATTACTaGATAGAGGAAGGGATTCAG +
Preference number: 5 (lower is better)
Translates to: SSAYVGTEATALTVKVHPSTVDY*IEEGIQ
Trigger: CTGAATCCCTTCCTCTATCAAGTAATCTACAGTCGA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCGCTTCAGCTTTCCTCTaGTCTTCATCAGATTCACTT +
Preference number: 5 (lower is better)
Translates to: SSAYVGTEATALTVKVHPASAFL*SSSDSL
Trigger: AAGTGAATCTGATGAAGACAAGAGGAAAGCTGAAGC...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTGCTTCAGCTTTCCTCTaGTCTTCATCAGATTCACTT +
Preference number: 5 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSASAFL*SSSDSL
Trigger: AAGTGAATCTGATGAAGACAAGAGGAAAGCTGAAGC...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCTTGAGGTCTACTaGATGTTCACTAGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: TSSSAYVGTEATALTVKVHLEVY*MFTSPH
Trigger: GTGAGGACTAGTGAACATCAAGTAGACCTCAAGGTG...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCATCTTGTCTGGTCATaGTCCTTGTCGGTAGATTTA +
Preference number: 5 (lower is better)
Translates to: SSAYVGTEATALTVKVHPHLVWS*SLSVDL
Trigger: TAAATCTACCGACAAGGACAATGACCAGACAAGATG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGTATGCCAGTTTTCCTTaGTGGAAAAGTGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: FPTSSSAYVGTEATALTVYASFP*WKSVSR
Trigger: CCTGGATACACTTTTCCACAAAGGAAAACTGGCATA...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS TCA 90 bp AGTCTCAAAAGAGTCCAATTCATCCCCACTAGGAATCCCAGTTCTTaGGGAGCTCTGAGACCCTGGAGTGTAACAGATGTGGGATGGCTC +
Preference number: 5 (lower is better)
Translates to: SLKRVQFIPTRNPSS*GALRPWSVTDVGWL
Trigger: GAGCCATCCCACATCTGTTACACTCCAGGGTCTCAGAGCTCCTCAAGAACTGGGATTCCTAGTGGGGATGAATTGGACTCTTTTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000513841.1
ENST00000545377.5
CDS GCA 90 bp ATGGCCTGGGACGCTGGACTGGAGAACGTTATCCTCGATGCGCTCTaGAATCATGACATGTCGCTGATGAGATCCGTCATAAGTAAAGTA +
Preference number: 5 (lower is better)
Translates to: MAWDAGLENVILDAL*NHDMSLMRSVISKV
Trigger: TACTTTACTTATGACGGATCTCATCAGCGACATGTCATGATTGCAGAGCGCATCGAGGATAACGTTCTCCAGTCCAGCGTCCCAGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296794.10
ENST00000426542.6
ENST00000437974.5
ENST00000509848.5
ENST00000513042.7
ENST00000545377.5
CDS GCA 90 bp GTCATTGCCTTTACTTTACGTGACCACTGTAAGCTCCAGGGACTGTaGTCAGGCTCATTGCCAAGGCCTGCATTTTCACTTACAGGCAGT +
Preference number: 5 (lower is better)
Translates to: VIAFTLRDHCKLQGL*SGSLPRPAFSLTGS
Trigger: ACTGCCTGTAAGTGAAAATGCAGGCCTTGGCAATGAGCCTGAGCACAGTCCCTGGAGCTTACAGTGGTCACGTAAAGTAAAGGCAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS-3UTR CAA 90 bp CACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACGTGGCACCCTCTTCGTaGGGTAAAGCCAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: HSTQEPTIQRDNFLFKLYVAPSS*GKAKAW
Trigger: CCAGGCCTTGGCTTTACCCAACGAAGAGGGTGCCAC...GTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp ATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATGCACTCGGGAGAAGCTaGGGGACCATCTGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: IYSHAREDFDSLYTRANHALGRS*GTICPE
Trigger: TTCAGGGCAGATGGTCCCCAAGCTTCTCCCGAGTGC...ATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTGAATTCTGTTTTCTCTaGGTGGCTCCGATAAGCTGT +
Preference number: 5 (lower is better)
Translates to: TSSSAYVGTEATALTVKVEFCFL*VAPISC
Trigger: ACAGCTTATCGGAGCCACCAAGAGAAAACAGAATTC...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCTGGCATCCTTGCTTTTaGTCTTTGATTTATTCCGAG +
Preference number: 5 (lower is better)
Translates to: SSAYVGTEATALTVKVHPWHPCF*SLIYSE
Trigger: CTCGGAATAAATCAAAGACAAAAAGCAAGGATGCCA...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTAGCTTCTCTTTATCTTaGGCATCCTTGCTTTTTGTC +
Preference number: 5 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSSFSLS*ASLLFV
Trigger: GACAAAAAGCAAGGATGCCAAAGATAAAGAGAAGCT...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCAGCTTCTCTTTATCTTaGGCATCCTTGCTTTTTGTC +
Preference number: 5 (lower is better)
Translates to: SSAYVGTEATALTVKVHPSFSLS*ASLLFV
Trigger: GACAAAAAGCAAGGATGCCAAAGATAAAGAGAAGCT...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp GTGCTCCAGGTGCTGGCAGGGACAGGACAGCTGATTGATAGAAGTGAGGGCTCTGCATCTTTACAACCTTaGTGCACATTTGCATTACAG +
Preference number: 5 (lower is better)
Translates to: VLQVLAGTGQLIDRSEGSASLQP*CTFALQ
Trigger: CTGTAATGCAAATGTGCACAAAGGTTGTAAAGATGC...AGAGCCCTCACTTCTATCAATCAGCTGTCCTGTCCCTGCCAGCACCTGGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGAGGATGGTCTGTGGTTaGTTCTTGTTATATTTCTCT +
Preference number: 5 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQRMVCG*FLLYFS
Trigger: AGAGAAATATAACAAGAACAAACCACAGACCATCCT...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTATGACATCCTGTCTTTaGATGACATCCTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TSSSAYVGTEATALTVKVMTSCL*MTSFSC
Trigger: GCAGGAGAAGGATGTCATCAAAAGACAGGATGTCAT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGATTAAGCAAAGCGCTTaGCGTAAGTCTTTATGTTCC +
Preference number: 5 (lower is better)
Translates to: FPTSSSAYVGTEATALTVIKQSA*RKSLCS
Trigger: GGAACATAAAGACTTACGCAAAGCGCTTTGCTTAAT...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCGAGTATTTCTTGACATaGCTGAATTTTGGCCACTCT +
Preference number: 5 (lower is better)
Translates to: SSAYVGTEATALTVKVHPEYFLT*LNFGHS
Trigger: AGAGTGGCCAAAATTCAGCAATGTCAAGAAATACTC...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp TCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTCACCCCCAAATACGCACAAATTaGTTGGTCTTGGTTAGTGAG +
Preference number: 5 (lower is better)
Translates to: SSAYVGTEATALTVKVHPQIRTN*LVLVSE
Trigger: CTCACTAACCAAGACCAACAAATTTGTGCGTATTTG...GGGGTGAACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp GAAGGGTTCTTTCCAGGGAGTGGTAGTTGGTGCTCCAGGTGCTGGCAGGGACAGTTTTTACAAGAATCCTaGCTGCTTTCATGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: EGFFPGSGSWCSRCWQGQFLQES*LLSWKG
Trigger: TCCTTTCCATGAAAGCAGCAAGGATTCTTGTAAAAA...CTGTCCCTGCCAGCACCTGGAGCACCAACTACCACTCCCTGGAAAGAACCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTACAACACGTGCCCAGTaGAATAGTGACTGTAACAGA +
Preference number: 5 (lower is better)
Translates to: TSSSAYVGTEATALTVKVTTRAQ*NSDCNR
Trigger: TCTGTTACAGTCACTATTCAACTGGGCACGTGTTGT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS GCA 90 bp GCGAGTCTTCTGAATACGAACTCGGCACATAAATTCACAAGGCTGTaGATTCCTGTCCTACATCTCACTCTCTTGCTGAGGTCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: ASLLNTNSAHKFTRL*IPVLHLTLLLRSLP
Trigger: AGGGAGAGACCTCAGCAAGAGAGTGAGATGTAGGACAGGAATGCACAGCCTTGTGAATTTATGTGCCGAGTTCGTATTCAGAAGACTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503341.1
CDS CCA 90 bp AGGGAGCCAGAAGTGCCTGCACTGTACCTTGACATTGCTGAATTTTaGCCACTCTGGCTTCAGCTTTCCTCTTGTCTTCATCAGATTCAC +
Preference number: 5 (lower is better)
Translates to: REPEVPALYLDIAEF*PLWLQLSSCLHQIH
Trigger: GTGAATCTGATGAAGACAAGAGGAAAGCTGAAGCCAGAGTGGCCAAAATTCAGCAATGTCAAGGTACAGTGCAGGCACTTCTGGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504003.1
CDS-3UTR CAA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCAGGCTGTGAGGCGATaGGCCTGCGTCACCAGCAGA +
Preference number: 5 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMQAVRR*ACVTSR
Trigger: TCTGCTGGTGACGCAGGCCAATCGCCTCACAGCCTG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCTCTGGCTCAAAGGCCTaGACAAGAAAGGCTCTATCC +
Preference number: 5 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGSGSKA*TRKALS
Trigger: GGATAGAGCCTTTCTTGTCAAGGCCTTTGAGCCAGA...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGCTCTTTGCTCTTCACTaGAACTGCATACTGTTAATT +
Preference number: 5 (lower is better)
Translates to: FPTSSSAYVGTEATALTVLFALH*NCILLI
Trigger: AATTAACAGTATGCAGTTCAAGTGAAGAGCAAAGAG...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATTCTCTTGGAATTTCTaGGTGCATGCAGGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: CLETPPALGLGTKQVRTVFSWNF*VHAGAA
Trigger: TGCTGCGCCTGCATGCACCAAGAAATTCCAAGAGAA...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp TTTCCCACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAGGATGGTCTGTGGTTaGTTCTTGTTATATTTCTCT +
Preference number: 5 (lower is better)
Translates to: FPTSSSAYVGTEATALTVRMVCG*FLLYFS
Trigger: AGAGAAATATAACAAGAACAAACCACAGACCATCCT...CACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCCGTCTCATCCAGTTATaGCGTTCCTCCTTGGAATTG +
Preference number: 5 (lower is better)
Translates to: LETPPALGLGTKQVRTVSRLIQL*RSSLEL
Trigger: CAATTCCAAGGAGGAACGCAATAACTGGATGAGACG...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS TCA 90 bp TGTGGTCCCTGCCCACATGGGGCTTACACGCTAACAGACAGCAACTaGCGAACCGCACAAAGTATCACCATCTTTGTACTTTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: CGPCPHGAYTLTDSN*RTAQSITIFVLFFL
Trigger: AAGAAAGAAAAGTACAAAGATGGTGATACTTTGTGCGGTTCGTCAGTTGCTGTCTGTTAGCGTGTAAGCCCCATGTGGGCAGGGACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS GCA 90 bp TTCTCGCTGCTCTTCTGGCTCTGTCGTGGCCCATCCACACTCCACTaGTTCTGTAGTAAGACCATATGGCACAGAGTTTTTATAGTCTAT +
Preference number: 5 (lower is better)
Translates to: FSLLFWLCRGPSTLH*FCSKTIWHRVFIVY
Trigger: ATAGACTATAAAAACTCTGTGCCATATGGTCTTACTACAGAAGCAGTGGAGTGTGGATGGGCCACGACAGAGCCAGAAGAGCAGCGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS CCA 90 bp CTACAGCCTGCTGGATCCGTCTCATCCAGTTATTGCGTTCCTCCTTaGAATTGGTGTGAATTTCATACATCTCAGGACCAGCAGATGAAG +
Preference number: 5 (lower is better)
Translates to: LQPAGSVSSSYCVPP*NWCEFHTSQDQQMK
Trigger: CTTCATCTGCTGGTCCTGAGATGTATGAAATTCACACCAATTCCAAGGAGGAACGCAATAACTGGATGAGACGGATCCAGCAGGCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000504003.1
ENST00000510312.6
ENST00000512883.1
ENST00000513042.7
ENST00000545377.5
CDS CCA 90 bp ACCCAGACACTTAACCTCAATTATCTACCTGTAGCTGAATTGGAGTaGAAGAGGGAGACTTTAGGGGTAGGAGCCACCCAACTTTGCGTT +
Preference number: 5 (lower is better)
Translates to: TQTLNLNYLPVAELE*KRETLGVGATQLCV
Trigger: AACGCAAAGTTGGGTGGCTCCTACCCCTAAAGTCTCCCTCTTCCACTCCAATTCAGCTACAGGTAGATAATTGAGGTTAAGTGTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS-3UTR CAA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCCGTCTCATCCAGTTATaGCGTTCCTCCTTGGAATTG +
Preference number: 5 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGRLIQL*RSSLEL
Trigger: CAATTCCAAGGAGGAACGCAATAACTGGATGAGACG...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGCTTCATCAGATTCACTaGTCCTTCCCCCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQLHQIH*SFPLFL
Trigger: AAGAAAAAGGGGGAAGGACAAGTGAATCTGATGAAG...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS GCA 90 bp CAGGACAACTTTCTACAGCCTGCTGGATCCGTCTCATCCAGTTATTaGGTTCCTCCTTGGAATTGGTGTGAATTTCATACATCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: QDNFLQPAGSVSSSY*VPPWNWCEFHTSQD
Trigger: GTCCTGAGATGTATGAAATTCACACCAATTCCAAGGAGGAACGCAATAACTGGATGAGACGGATCCAGCAGGCTGTAGAAAGTTGTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000504003.1
ENST00000510312.6
ENST00000512883.1
ENST00000513042.7
ENST00000545377.5
CDS CCA 90 bp AATAAAACACAGATCAGGTCCCTGTCCCTGTATCCAATTTCAGGGTaGGCCAGAGGGTCTCCAGTGAACAGAACTTTCCTAGAAGTAGAA +
Preference number: 5 (lower is better)
Translates to: NKTQIRSLSLYPISG*ARGSPVNRTFLEVE
Trigger: TTCTACTTCTAGGAAAGTTCTGTTCACTGGAGACCCTCTGGCCCACCCTGAAATTGGATACAGGGACAGGGACCTGATCTGTGTTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS CCA 90 bp AACTCCATGGCTTTCGCATTTTCTTTGGATTTTGCCCAATTGGTGTaGTCCGTGGTGAACCTCTATAACTCCTGGTGTGAGGAGATGTGT +
Preference number: 5 (lower is better)
Translates to: NSMAFAFSLDFAQLV*SVVNLYNSWCEEMC
Trigger: ACACATCTCCTCACACCAGGAGTTATAGAGGTTCACCACGGACCACACCAATTGGGCAAAATCCAAAGAAAATGCGAAAGCCATGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509848.5
CDS-3UTR CAA 90 bp TACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCATCTGGCTCAAAGGCCTaGACAAGAAAGGCTCTATCC +
Preference number: 5 (lower is better)
Translates to: YRFIPMLGRTLIHSTQEPSGSKA*TRKALS
Trigger: GGATAGAGCCTTTCTTGTCAAGGCCTTTGAGCCAGA...TGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTGAATTCTGTTTTCTCTaGGTGGCTCCGATAAGCTGT +
Preference number: 5 (lower is better)
Translates to: LVSHTETHTTRKAGYASFEFCFL*VAPISC
Trigger: ACAGCTTATCGGAGCCACCAAGAGAAAACAGAATTC...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTGGCATCCTTGCTTTTaGTCTTTGATTTATTCCGAG +
Preference number: 5 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQWHPCF*SLIYSE
Trigger: CTCGGAATAAATCAAAGACAAAAAGCAAGGATGCCA...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTAGGATGGTCTGTGGTTaGTTCTTGTTATATTTCTCT +
Preference number: 5 (lower is better)
Translates to: TSSSAYVGTEATALTVKVRMVCG*FLLYFS
Trigger: AGAGAAATATAACAAGAACAAACCACAGACCATCCT...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp ATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACATGACATCCTGTCTTTaGATGACATCCTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: MLGRTLIHSTQEPTIQRDMTSCL*MTSFSC
Trigger: GCAGGAGAAGGATGTCATCAAAAGACAGGATGTCAT...GTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGCCTCAGTTCTTTCCTTaGTGTACTGCAATATCCTTT +
Preference number: 5 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQPQFFP*CTAISF
Trigger: AAAGGATATTGCAGTACACAAAGGAAAGAACTGAGG...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp TCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGATTAAGCAAAGCGCTTaGCGTAAGTCTTTATGTTCC +
Preference number: 5 (lower is better)
Translates to: SPGFSHRDPYYSEGRICQIKQSA*RKSLCS
Trigger: GGAACATAAAGACTTACGCAAAGCGCTTTGCTTAAT...CTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCGTCTCATCCAGTTATaGCGTTCCTCCTTGGAATTG +
Preference number: 5 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVRLIQL*RSSLEL
Trigger: CAATTCCAAGGAGGAACGCAATAACTGGATGAGACG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCGCTTCAGCTTTCCTCTaGTCTTCATCAGATTCACTT +
Preference number: 5 (lower is better)
Translates to: LETPPALGLGTKQVRTVSASAFL*SSSDSL
Trigger: AAGTGAATCTGATGAAGACAAGAGGAAAGCTGAAGC...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp ACATCCTCCTCTGCCTATGTGGGCACTGAGGCAACTGCCCTGACTGTGAAAGTTGTTAGTGAGTATTTCTaGACATTGCTGAATTTTGGC +
Preference number: 5 (lower is better)
Translates to: TSSSAYVGTEATALTVKVVSEYF*TLLNFG
Trigger: GCCAAAATTCAGCAATGTCAAGAAATACTCACTAAC...AACTTTCACAGTCAGGGCAGTTGCCTCAGTGCCCACATAGGCAGAGGAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCGTCTGGTCATTGTCCTaGTCGGTAGATTTAGCTTTG +
Preference number: 5 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGVWSLS*SVDLAL
Trigger: CAAAGCTAAATCTACCGACAAGGACAATGACCAGAC...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTACAACACGTGCCCAGTaGAATAGTGACTGTAACAGA +
Preference number: 5 (lower is better)
Translates to: LVSHTETHTTRKAGYASFTTRAQ*NSDCNR
Trigger: TCTGTTACAGTCACTATTCAACTGGGCACGTGTTGT...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTACTGGGCCTCTGGGCCTaGTTAAAAGATGATGCTGAA +
Preference number: 5 (lower is better)
Translates to: GRICQFSFVEKCIQAANLLGLWA*LKDDAE
Trigger: TTCAGCATCATCTTTTAACAAGGCCCAGAGGCCCAG...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS TCA 90 bp CAAAAGAAAGATTCAAGTTGGAAGCACACGAACTTGATGGTGACATaGAGGACTGCTGGGCTTCAGTGTGTGCTGTCCCTTCGACATTTT +
Preference number: 5 (lower is better)
Translates to: QKKDSSWKHTNLMVT*RTAGLQCVLSLRHF
Trigger: AAAATGTCGAAGGGACAGCACACACTGAAGCCCAGCAGTCCTTCATGTCACCATCAAGTTCGTGTGCTTCCAACTTGAATCTTTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000513841.1
ENST00000545377.5
CDS GCA 90 bp GTACCAAAATATCTCCAATTCGGTCGATCACAAAATTCCTGTCGCTaGCAGCACAGGATTCCTGCCTTCGTTCCTTCATACTGTAGAAGA +
Preference number: 5 (lower is better)
Translates to: VPKYLQFGRSQNSCR*QHRIPAFVPSYCRR
Trigger: TCTTCTACAGTATGAAGGAACGAAGGCAGGAATCCTGTGCTGGCAGCGACAGGAATTTTGTGATCGACCGAATTGGAGATATTTTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000545377.5
CDS GCA 90 bp GCTGACATAAGCCTGATGAAGAAGAGCCCAGTTCTCCAAGTCATTTaGAGAACCGACCCATTCAGTCACAGTTGTAGACCTTCATTTAGA +
Preference number: 5 (lower is better)
Translates to: ADISLMKKSPVLQVI*RTDPFSHSCRPSFR
Trigger: TCTAAATGAAGGTCTACAACTGTGACTGAATGGGTCGGTTCTGCAAATGACTTGGAGAACTGGGCTCTTCTTCATCAGGCTTATGTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS CCA 90 bp CTTTTCTCAATGTTTGAGATTCACGATATCAACATATACAGCAGTTaGGAAAAGAAACCAGACTCAGACGGTGGCCATAGTGGCGCGCGT +
Preference number: 5 (lower is better)
Translates to: LFSMFEIHDINIYSS*EKKPDSDGGHSGAR
Trigger: ACGCGCGCCACTATGGCCACCGTCTGAGTCTGGTTTCTTTTCCCAACTGCTGTATATGTTGATATCGTGAATCTCAAACATTGAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS-3UTR CAA 90 bp CACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACACGTCTTCCACCAGCTaGGAGTGTCCTTCACGTAAA +
Preference number: 5 (lower is better)
Translates to: HSTQEPTIQRDNFLFKLYTSSTS*ECPSRK
Trigger: TTTACGTGAAGGACACTCCAAGCTGGTGGAAGACGT...GTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATTCTGGCTCAAAGGCCTaGACAAGAAAGGCTCTATCC +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHSGSKA*TRKALS
Trigger: GGATAGAGCCTTTCTTGTCAAGGCCTTTGAGCCAGA...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp GTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCCAAGTCAGAATGAGATaGAGTTGTAGGGTAAGTGGC +
Preference number: 5 (lower is better)
Translates to: VPIYSHAREDFDSLYTRAQVRMR*SCRVSG
Trigger: GCCACTTACCCTACAACTCAATCTCATTCTGACTTG...GGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTATTACATCAAAATGACTaGATGGGGGCTCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLLHQND*MGALGL
Trigger: GAGGCCCAGAGCCCCCATCAAGTCATTTTGATGTAA...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS TCA 90 bp GAGCGATCCAAATCTAGGCTGTGCTGGTCTTCATGTTCATTGTGTTaGACCACCAGGCTTTTGACACGCTTTATATCTTCCTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: ERSKSRLCWSSCSLC*TTRLLTRFISSFSA
Trigger: AGCTGAAAAGGAAGATATAAAGCGTGTCAAAAGCCTGGTGGTTCAACACAATGAACATGAAGACCAGCACAGCCTAGATTTGGATCGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296794.10
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000545377.5
CDS TCA 90 bp CAAACCAAACACTGCAGAACCCCAGAGAATGTTCCTGGGGCAAACTaGTGTCGATTCAGCTTCTCTTTATCTTTGGCATCCTTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: QTKHCRTPENVPGAN*CRFSFSLSLASLLF
Trigger: AAAAAGCAAGGATGCCAAAGATAAAGAGAAGCTGAATCGACATCAGTTTGCCCCAGGAACATTCTCTGGGGTTCTGCAGTGTTTGGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000513042.7
ENST00000545377.5
CDS TCA 90 bp ACCTTGTGCAAACCACAATGTGAATTGAGTTCTCTGTGCCCAGACTaGAGTTGTCTTTTGGGTCAGGCTGACCTCTTATATTCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: TLCKPQCELSSLCPD*SCLLGQADLLYSRG
Trigger: TCCTCTAGAATATAAGAGGTCAGCCTGACCCAAAAGACAACTTCAGTCTGGGCACAGAGAACTCAATTCACATTGTGGTTTGCACAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS CCA 90 bp GACAGGGTATTTTGTAATACGCTGAGTGACCAACAGAATGCATTCTaGAATTCCTCGGCGTCGAGCCAAAAGATTACTATTTCGGAGCTT +
Preference number: 5 (lower is better)
Translates to: DRVFCNTLSDQQNAF*NSSASSQKITISEL
Trigger: AAGCTCCGAAATAGTAATCTTTTGGCTCGACGCCGAGGAATTCCAGAATGCATTCTGTTGGTCACTCAGCGTATTACAAAATACCCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296794.10
ENST00000296799.8
ENST00000426542.6
ENST00000437974.5
ENST00000510312.6
ENST00000513042.7
ENST00000545377.5
CDS-3UTR CAA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCAAAGAAAGATTCAAGTaGGAAGCACACGAACTTGAT +
Preference number: 5 (lower is better)
Translates to: LETPPALGLGTKQVRTVSKERFK*EAHELD
Trigger: ATCAAGTTCGTGTGCTTCCAACTTGAATCTTTCTTT...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp ATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATTCTCTTGGAATTTCTaGGTGCATGCAGGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: IHSTQEPTIQRDNFLFKLFSWNF*VHAGAA
Trigger: TGCTGCGCCTGCATGCACCAAGAAATTCCAAGAGAA...TAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAATTCTCTTGGAATTTCTaGGTGCATGCAGGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: NKMKISPGFSHRDPYYSEFSWNF*VHAGAA
Trigger: TGCTGCGCCTGCATGCACCAAGAAATTCCAAGAGAA...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp CTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTATCCAACACATGTCCATTTTaGAGCTTCGTGTATGTTTTG +
Preference number: 5 (lower is better)
Translates to: LETPPALGLGTKQVRTVSNTCPF*SFVYVL
Trigger: CAAAACATACACGAAGCTCAAAAATGGACATGTGTT...GGATACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCAGAGCTAGGATATCTTaGAAACGACCTGTAGCAGTT +
Preference number: 5 (lower is better)
Translates to: RFIPMLGRTLIHSTQEPTRARIS*KRPVAV
Trigger: AACTGCTACAGGTCGTTTCAAAGATATCCTAGCTCT...GGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CATCAGTACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAACGTCTCATCCAGTTATaGCGTTCCTCCTTGGAATTG +
Preference number: 5 (lower is better)
Translates to: HQYRFIPMLGRTLIHSTQRLIQL*RSSLEL
Trigger: CAATTCCAAGGAGGAACGCAATAACTGGATGAGACG...TTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTACTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CTGGTTTCTCACACAGAGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTGAGTATTTCTTGACATaGCTGAATTTTGGCCACTCT +
Preference number: 5 (lower is better)
Translates to: LVSHTETHTTRKAGYASFEYFLT*LNFGHS
Trigger: AGAGTGGCCAAAATTCAGCAATGTCAAGAAATACTC...AAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp TGTCTTGAAACCCCACCAGCATTAGGCTTAGGTACTAAGCAAGTCCGGACTGTACAAATACGCACAAATTaGTTGGTCTTGGTTAGTGAG +
Preference number: 5 (lower is better)
Translates to: CLETPPALGLGTKQVRTVQIRTN*LVLVSE
Trigger: CTCACTAACCAAGACCAACAAATTTGTGCGTATTTG...TACAGTCCGGACTTGCTTAGTACCTAAGCCTAATGCTGGTGGGGTTTCAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCACCTTGAGGTCTACTaGATGTTCACTAGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHHLEVY*MFTSPH
Trigger: GTGAGGACTAGTGAACATCAAGTAGACCTCAAGGTG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTACACCTTGAGGTCTACTaGATGTTCACTAGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLHLEVY*MFTSPH
Trigger: GTGAGGACTAGTGAACATCAAGTAGACCTCAAGGTG...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp AGACCCATACTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGCATCTTGTCTGGTCATaGTCCTTGTCGGTAGATTTA +
Preference number: 5 (lower is better)
Translates to: RPILLGRQDMPVFLCGKVHLVWS*SLSVDL
Trigger: TAAATCTACCGACAAGGACAATGACCAGACAAGATG...CACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAGTATGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTGGGCCTCTGGGCCTaGTTAAAAGATGATGCTGAA +
Preference number: 5 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMLGLWA*LKDDAE
Trigger: TTCAGCATCATCTTTTAACAAGGCCCAGAGGCCCAG...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS CCA 90 bp CCTGTCAGAGCAGACAGAGGAAAAATCACTGAACACAAGGTTCCATaGTTATTGTTTACCCTTTCGGTTGGAACTACCTCGAAACACAAA +
Preference number: 5 (lower is better)
Translates to: PVRADRGKITEHKVP*LLFTLSVGTTSKHK
Trigger: TTTGTGTTTCGAGGTAGTTCCAACCGAAAGGGTAAACAATAACCATGGAACCTTGTGTTCAGTGATTTTTCCTCTGTCTGCTCTGACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503341.1
CDS-3UTR CAA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCACGTCTTCCACCAGCTaGGAGTGTCCTTCACGTAAA +
Preference number: 5 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSTSSTS*ECPSRK
Trigger: TTTACGTGAAGGACACTCCAAGCTGGTGGAAGACGT...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp CTACTCGGAAGGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCCTCTTTGCTCTTCACTaGAACTGCATACTGTTAATT +
Preference number: 5 (lower is better)
Translates to: LLGRQDMPVFLCGKVYPGLFALH*NCILLI
Trigger: AATTAACAGTATGCAGTTCAAGTGAAGAGCAAAGAG...GCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCCTTCCGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp GATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTGAATTCTGTTTTCTCTaGGTGGCTCCGATAAGCTGT +
Preference number: 5 (lower is better)
Translates to: DSLYTRANHSEGQLLVQTEFCFL*VAPISC
Trigger: ACAGCTTATCGGAGCCACCAAGAGAAAACAGAATTC...AGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATGAATTCTGTTTTCTCTaGGTGGCTCCGATAAGCTGT +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHEFCFL*VAPISC
Trigger: ACAGCTTATCGGAGCCACCAAGAGAAAACAGAATTC...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp CCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACTGGCATCCTTGCTTTTaGTCTTTGATTTATTCCGAG +
Preference number: 5 (lower is better)
Translates to: PIYSHAREDFDSLYTRANWHPCF*SLIYSE
Trigger: CTCGGAATAAATCAAAGACAAAAAGCAAGGATGCCA...GTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCGCATCTTTACAACCTTaGTGCACATTTGCATTACAG +
Preference number: 5 (lower is better)
Translates to: RFIPMLGRTLIHSTQEPTASLQP*CTFALQ
Trigger: CTGTAATGCAAATGTGCACAAAGGTTGTAAAGATGC...GGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAAGAGCTAGGATATCTTaGAAACGACCTGTAGCAGTT +
Preference number: 5 (lower is better)
Translates to: GRICQFSFVEKCIQAANLRARIS*KRPVAV
Trigger: AACTGCTACAGGTCGTTTCAAAGATATCCTAGCTCT...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp TACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAGCTTCAGCTTTCCTCTaGTCTTCATCAGATTCACTT +
Preference number: 5 (lower is better)
Translates to: YRFIPMLGRTLIHSTQEPASAFL*SSSDSL
Trigger: AAGTGAATCTGATGAAGACAAGAGGAAAGCTGAAGC...TGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp ATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACGTTAGTGAGTATTTCTaGACATTGCTGAATTTTGGC +
Preference number: 5 (lower is better)
Translates to: MLGRTLIHSTQEPTIQRDVSEYF*TLLNFG
Trigger: GCCAAAATTCAGCAATGTCAAGAAATACTCACTAAC...GTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCCAAATACGCACAAATTaGTTGGTCTTGGTTAGTGAG +
Preference number: 5 (lower is better)
Translates to: RFIPMLGRTLIHSTQEPTQIRTN*LVLVSE
Trigger: CTCACTAACCAAGACCAACAAATTTGTGCGTATTTG...GGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTACAAGTCAGAATGAGATaGAGTTGTAGGGTAAGTGGC +
Preference number: 5 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLQVRMR*SCRVSG
Trigger: GCCACTTACCCTACAACTCAATCTCATTCTGACTTG...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCAAGTCAGAATGAGATaGAGTTGTAGGGTAAGTGGC +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHQVRMR*SCRVSG
Trigger: GCCACTTACCCTACAACTCAATCTCATTCTGACTTG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp TTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACACCTTGAGGTCTACTaGATGTTCACTAGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: LIHSTQEPTIQRDNFLFKHLEVY*MFTSPH
Trigger: GTGAGGACTAGTGAACATCAAGTAGACCTCAAGGTG...TTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAGTCTGGTCATTGTCCTaGTCGGTAGATTTAGCTTTG +
Preference number: 5 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLVWSLS*SVDLAL
Trigger: CAAAGCTAAATCTACCGACAAGGACAATGACCAGAC...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATGTCTGGTCATTGTCCTaGTCGGTAGATTTAGCTTTG +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHVWSLS*SVDLAL
Trigger: CAAAGCTAAATCTACCGACAAGGACAATGACCAGAC...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTACATCTTGTCTGGTCATaGTCCTTGTCGGTAGATTTA +
Preference number: 5 (lower is better)
Translates to: GRICQFSFVEKCIQAANLHLVWS*SLSVDL
Trigger: TAAATCTACCGACAAGGACAATGACCAGACAAGATG...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp AACAAGATGAAAATATCTCCTGGTTTCTCACACAGAGACCCATACTACTCGGAATCCAGTTTCCCCATCTaGTCTGGTCATTGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: NKMKISPGFSHRDPYYSESSFPI*SGHCPC
Trigger: ACAAGGACAATGACCAGACAAGATGGGGAAACTGGA...TTCCGAGTAGTATGGGTCTCTGTGTGAGAAACCAGGAGATATTTTCATCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTATATGCCAGTTTTCCTTaGTGGAAAAGTGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: GRICQFSFVEKCIQAANLYASFP*WKSVSR
Trigger: CCTGGATACACTTTTCCACAAAGGAAAACTGGCATA...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS TCA 90 bp TTCATACCCAAATCTAGGCTGTGCTGGTCTTCATGTTCATTGTGTTaGACCACCAGGCTTTTGACACGCTTTATATCTTCCTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: FIPKSRLCWSSCSLC*TTRLLTRFISSFSA
Trigger: AGCTGAAAAGGAAGATATAAAGCGTGTCAAAAGCCTGGTGGTTCAACACAATGAACATGAAGACCAGCACAGCCTAGATTTGGGTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510131.1
CDS-3UTR CAA 90 bp GATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTTTCATGTTCATTGTGTaGAACCACCAGGCTTTTGAC +
Preference number: 5 (lower is better)
Translates to: DSLYTRANHSEGQLLVQTFMFIV*NHQAFD
Trigger: GTCAAAAGCCTGGTGGTTCAACACAATGAACATGAA...AGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTATTCATGTTCATTGTGTaGAACCACCAGGCTTTTGAC +
Preference number: 5 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLFMFIV*NHQAFD
Trigger: GTCAAAAGCCTGGTGGTTCAACACAATGAACATGAA...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp TACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCACCTCAGTTCTTTCCTTaGTGTACTGCAATATCCTTT +
Preference number: 5 (lower is better)
Translates to: YRFIPMLGRTLIHSTQEPPQFFP*CTAISF
Trigger: AAAGGATATTGCAGTACACAAAGGAAAGAACTGAGG...TGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATAGAGCTAGGATATCTTaGAAACGACCTGTAGCAGTT +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHRARIS*KRPVAV
Trigger: AACTGCTACAGGTCGTTTCAAAGATATCCTAGCTCT...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAAGAGCTAGGATATCTTaGAAACGACCTGTAGCAGTT +
Preference number: 5 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLRARIS*KRPVAV
Trigger: AACTGCTACAGGTCGTTTCAAAGATATCCTAGCTCT...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCTTCATCAGATTCACTaGTCCTTCCCCCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHLHQIH*SFPLFL
Trigger: AAGAAAAAGGGGGAAGGACAAGTGAATCTGATGAAG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATGCTTCAGCTTTCCTCTaGTCTTCATCAGATTCACTT +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHASAFL*SSSDSL
Trigger: AAGTGAATCTGATGAAGACAAGAGGAAAGCTGAAGC...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCACCTTGAGGTCTACTaGATGTTCACTAGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMHLEVY*MFTSPH
Trigger: GTGAGGACTAGTGAACATCAAGTAGACCTCAAGGTG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCTCCAGTTTCCCCATCTaGTCTGGTCATTGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSSSFPI*SGHCPC
Trigger: ACAAGGACAATGACCAGACAAGATGGGGAAACTGGA...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATTATGCCAGTTTTCCTTaGTGGAAAAGTGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHYASFP*WKSVSR
Trigger: CCTGGATACACTTTTCCACAAAGGAAAACTGGCATA...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATACGTACAACTGCACTTaGTCATACTGGAGCCATTTT +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHTYNCT*SYWSHF
Trigger: AAAATGGCTCCAGTATGACAAAGTGCAGTTGTACGT...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS TCA 90 bp GAACCGCACAAAGTATCACCATCTTTGTACTTTTCTTTCTTGCACTaGAGTGTTCGTGTGTCGTTTGTGTTACAGAGGGTAGAATCTACA +
Preference number: 5 (lower is better)
Translates to: EPHKVSPSLYFSFLH*SVRVSFVLQRVEST
Trigger: TGTAGATTCTACCCTCTGTAACACAAACGACACACGAACACTTCAGTGCAAGAAAGAAAAGTACAAAGATGGTGATACTTTGTGCGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510312.6
CDS GCA 90 bp TGGAATTTCTTGGTGCATGCAGGCGCAGCATCTTTACAACCTTTGTaGACATTTGCATTACAGTCCAAGGAAGAGATCAGAAAAATTAGA +
Preference number: 5 (lower is better)
Translates to: WNFLVHAGAASLQPL*TFALQSKEEIRKIR
Trigger: TCTAATTTTTCTGATCTCTTCCTTGGACTGTAATGCAAATGTGCACAAAGGTTGTAAAGATGCTGCGCCTGCATGCACCAAGAAATTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506334.1
CDS-3UTR CAA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTTCATGTTCATTGTGTaGAACCACCAGGCTTTTGAC +
Preference number: 5 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMFMFIV*NHQAFD
Trigger: GTCAAAAGCCTGGTGGTTCAACACAATGAACATGAA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp CTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGATTCGACTGTAGATTACTaGATAGAGGAAGGGATTCAG +
Preference number: 5 (lower is better)
Translates to: LHKSQPFRGTTSCSNYTDSTVDY*IEEGIQ
Trigger: CTGAATCCCTTCCTCTATCAAGTAATCTACAGTCGA...ATCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGTCGACTGTAGATTACTaGATAGAGGAAGGGATTCAG +
Preference number: 5 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMSTVDY*IEEGIQ
Trigger: CTGAATCCCTTCCTCTATCAAGTAATCTACAGTCGA...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp AGGACTTTGATTCACTCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGCTCTTTGCTCTTCACTaGAACTGCATACTGTTAATT +
Preference number: 5 (lower is better)
Translates to: RTLIHSTQEPTIQRDNFLLFALH*NCILLI
Trigger: AATTAACAGTATGCAGTTCAAGTGAAGAGCAAAGAG...CAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTACTCTTTGCTCTTCACTaGAACTGCATACTGTTAATT +
Preference number: 5 (lower is better)
Translates to: GRICQFSFVEKCIQAANLLFALH*NCILLI
Trigger: AATTAACAGTATGCAGTTCAAGTGAAGAGCAAAGAG...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426542.6
ENST00000545377.5
CDS-3UTR CAA 90 bp CCAATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTACCTCAGTTCTTTCCTTaGTGTACTGCAATATCCTTT +
Preference number: 5 (lower is better)
Translates to: PITTRAQLNSDCNRSPLLPQFFP*CTAISF
Trigger: AAAGGATATTGCAGTACACAAAGGAAAGAACTGAGG...TAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATATTAAGCAAAGCGCTTaGCGTAAGTCTTTATGTTCC +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHIKQSA*RKSLCS
Trigger: GGAACATAAAGACTTACGCAAAGCGCTTTGCTTAAT...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000545377.5
CDS-3UTR CAA 90 bp TACCGATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAAACACATGTCCATTTTaGAGCTTCGTGTATGTTTTG +
Preference number: 5 (lower is better)
Translates to: YRFIPMLGRTLIHSTQEPNTCPF*SFVYVL
Trigger: CAAAACATACACGAAGCTCAAAAATGGACATGTGTT...TGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAATCGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp GGCAGGATATGCCAGTTTTCCTTTGTGGAAAAGTGTATCCAGGCAGCAAACTTAAACACATGTCCATTTTaGAGCTTCGTGTATGTTTTG +
Preference number: 5 (lower is better)
Translates to: GRICQFSFVEKCIQAANLNTCPF*SFVYVL
Trigger: CAAAACATACACGAAGCTCAAAAATGGACATGTGTT...TAAGTTTGCTGCCTGGATACACTTTTCCACAAAGGAAAACTGGCATATCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426542.6
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp ATCACAACACGTGCCCAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGAGAGCTAGGATATCTTaGAAACGACCTGTAGCAGTT +
Preference number: 5 (lower is better)
Translates to: ITTRAQLNSDCNRSPLLMRARIS*KRPVAV
Trigger: AACTGCTACAGGTCGTTTCAAAGATATCCTAGCTCT...CATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTGGGCACGTGTTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp TCTACACAAGAGCCAACCATTCAGAGGGACAACTTCTTGTTCAAACTATACAGACTTCATCAGATTCACTaGTCCTTCCCCCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: STQEPTIQRDNFLFKLYRLHQIH*SFPLFL
Trigger: AAGAAAAAGGGGGAAGGACAAGTGAATCTGATGAAG...TCTGTATAGTTTGAACAAGAAGTTGTCCCTCTGAATGGTTGGCTCTTGTGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp ATTTATTCCCATGCTAGGGAGGACTTTGATTCACTCTACACAAGAGCCAACCATGAGTATTTCTTGACATaGCTGAATTTTGGCCACTCT +
Preference number: 5 (lower is better)
Translates to: IYSHAREDFDSLYTRANHEYFLT*LNFGHS
Trigger: AGAGTGGCCAAAATTCAGCAATGTCAAGAAATACTC...ATGGTTGGCTCTTGTGTAGAGTGAATCAAAGTCCTCCCTAGCATGGGAATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296794.10
CDS-3UTR CAA 90 bp CTCCCAGAAGAAATGAGCACACAAAAACTAGCTGAGAAAAACCCTTTCCCACATCAAATACGCACAAATTaGTTGGTCTTGGTTAGTGAG +
Preference number: 5 (lower is better)
Translates to: LPEEMSTQKLAEKNPFPHQIRTN*LVLVSE
Trigger: CTCACTAACCAAGACCAACAAATTTGTGCGTATTTG...ATGTGGGAAAGGGTTTTTCTCAGCTAGTTTTTGTGTGCTCATTTCTTCTGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGCAAGTCAGAATGAGATaGAGTTGTAGGGTAAGTGGC +
Preference number: 5 (lower is better)
Translates to: QLNSDCNRSPLLMLPEEMQVRMR*SCRVSG
Trigger: GCCACTTACCCTACAACTCAATCTCATTCTGACTTG...CATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp TTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGAGCCAAGTCAGAATGAGATaGAGTTGTAGGGTAAGTGGC +
Preference number: 5 (lower is better)
Translates to: LNSDCNRSPLLMLPEEMSQVRMR*SCRVSG
Trigger: GCCACTTACCCTACAACTCAATCTCATTCTGACTTG...GCTCATTTCTTCTGGGAGCATTAAAAGTGGTGATCTGTTACAGTCACTATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426542.6
ENST00000437974.5
ENST00000512883.1
ENST00000545377.5
CDS-3UTR CAA 90 bp CAGTTGAATAGTGACTGTAACAGATCACCACTTTTAATGCTCCCAGAAGAAATGACAACACGTGCCCAGTaGAATAGTGACTGTAACAGA +
Preference number: